Psyllid ID: psy5981

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
MSFKSVTVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGDKLKGSVLVVGGDGRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKHILGRLVKVPSSNPSRTIRPCPLLITK
cccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHccccEEEEccccccccccccccccccc
ccEccEEEEcccccccccccccEEEEHHHHccccHHHHHHHHHHccccccccccEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEEEEccHHHHHHHHHHHccccEEEEcccccccccccccEEEcc
MSFKSVTVETkvfdgqkpgtsglrkptktfqqehyTENFIQSILTALGDklkgsvlvvggdgryfgdVAVDKIIKISAANGVAKLIvgqngilstPAVSALIRKHILGRlvkvpssnpsrtirpcpllitk
msfksvtvetkvfdgqkpgtsglrkpTKTFQQEHYTENFIQSILTALGDKLKGSVLVVGGDGRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKHILGrlvkvpssnpsrtirpcpllitk
MSFKSVTVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGDKLKGSVLVVGGDGRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKHILGRLVKVPSSNPSRTIRPCPLLITK
********************************EHYTENFIQSILTALGDKLKGSVLVVGGDGRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKHILGRLVKV******************
****SVT*ETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGDKLKGSVLVVGGDGRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKHILGRLVKVPSSNPSRTIRP*******
MSFKSVTVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGDKLKGSVLVVGGDGRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKHILGRLVKVPSSNPSRTIRPCPLLITK
*SFKSVTVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGDKLKGSVLVVGGDGRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKHILGRLVKVPSSNPSRTIRPCPLLITK
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSFKSVTVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGDKLKGSVLVVGGDGRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKHILGRLVKVPSSNPSRTIRPCPLLITK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query131 2.2.26 [Sep-21-2011]
Q9VUY9 560 Phosphoglucomutase OS=Dro yes N/A 0.900 0.210 0.605 3e-32
Q7KHA1 560 Phosphoglucomutase OS=Dro N/A N/A 0.900 0.210 0.605 5e-32
P93262 583 Phosphoglucomutase, cytop N/A N/A 0.893 0.200 0.56 3e-31
P37012 569 Phosphoglucomutase-2 OS=S yes N/A 0.900 0.207 0.549 6e-30
Q9M4G4 583 Phosphoglucomutase, cytop N/A N/A 0.893 0.200 0.504 2e-28
Q9SM60 582 Phosphoglucomutase, cytop N/A N/A 0.885 0.199 0.5 9e-28
Q9SGC1 585 Probable phosphoglucomuta no N/A 0.900 0.201 0.507 9e-28
O49299 583 Probable phosphoglucomuta no N/A 0.900 0.202 0.523 3e-27
Q23919 572 Phosphoglucomutase-1 OS=D yes N/A 0.893 0.204 0.521 3e-27
Q4WY53 555 Phosphoglucomutase OS=Neo yes N/A 0.885 0.209 0.529 6e-27
>sp|Q9VUY9|PGM_DROME Phosphoglucomutase OS=Drosophila melanogaster GN=Pgm PE=1 SV=1 Back     alignment and function desciption
 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 88/119 (73%), Gaps = 1/119 (0%)

Query: 1   MSFKSVTVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGDKLKGSVLVVGG 60
           MS     V TK ++GQKPGTSGLRK  K F Q +YTENF+Q+IL A G  L GS LVVGG
Sbjct: 1   MSLTVEIVATKPYEGQKPGTSGLRKKVKVFTQPNYTENFVQAILEANGAALAGSTLVVGG 60

Query: 61  DGRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKH-ILGRLVKVPSSNP 118
           DGR++   A + I+++SAANGV+KL+VGQNGILSTPAVS+LIR +  LG +V   S NP
Sbjct: 61  DGRFYCKEAAELIVRLSAANGVSKLLVGQNGILSTPAVSSLIRHNKALGGIVLTASHNP 119
This enzyme participates in both the breakdown and synthesis of glucose.
Drosophila melanogaster (taxid: 7227)
EC: 5EC: .EC: 4EC: .EC: 2EC: .EC: 2
>sp|Q7KHA1|PGM_DROSI Phosphoglucomutase OS=Drosophila simulans GN=Pgm PE=3 SV=1 Back     alignment and function description
>sp|P93262|PGMC_MESCR Phosphoglucomutase, cytoplasmic OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1 Back     alignment and function description
>sp|P37012|PGM2_YEAST Phosphoglucomutase-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PGM2 PE=1 SV=1 Back     alignment and function description
>sp|Q9M4G4|PGMC_SOLTU Phosphoglucomutase, cytoplasmic OS=Solanum tuberosum GN=PGM1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic OS=Pisum sativum GN=PGM1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SGC1|PGMC2_ARATH Probable phosphoglucomutase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At1g70730 PE=1 SV=1 Back     alignment and function description
>sp|O49299|PGMC1_ARATH Probable phosphoglucomutase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g23190 PE=1 SV=2 Back     alignment and function description
>sp|Q23919|PGM1_DICDI Phosphoglucomutase-1 OS=Dictyostelium discoideum GN=pgmA PE=2 SV=1 Back     alignment and function description
>sp|Q4WY53|PGM_ASPFU Phosphoglucomutase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgmA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query131
380024333 564 PREDICTED: phosphoglucomutase-like [Apis 0.870 0.202 0.695 5e-38
66561330 563 PREDICTED: phosphoglucomutase [Apis mell 0.870 0.202 0.704 5e-38
156537922 563 PREDICTED: phosphoglucomutase-like [Naso 0.847 0.197 0.723 5e-37
307205240 544 Phosphoglucomutase [Harpegnathos saltato 0.870 0.209 0.704 5e-37
332024861 601 Phosphoglucomutase [Acromyrmex echinatio 0.900 0.196 0.663 7e-36
350423965 564 PREDICTED: phosphoglucomutase-like [Bomb 0.870 0.202 0.669 1e-35
340726378 564 PREDICTED: phosphoglucomutase-like [Bomb 0.870 0.202 0.669 1e-35
307181839 568 Phosphoglucomutase [Camponotus floridanu 0.847 0.195 0.687 5e-35
223036838 560 phosphoglucomutase [Locusta migratoria] 0.900 0.210 0.655 6e-35
383847991 562 PREDICTED: phosphoglucomutase-like [Mega 0.847 0.197 0.660 3e-34
>gi|380024333|ref|XP_003695955.1| PREDICTED: phosphoglucomutase-like [Apis florea] Back     alignment and taxonomy information
 Score =  162 bits (410), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 80/115 (69%), Positives = 95/115 (82%), Gaps = 1/115 (0%)

Query: 5   SVTVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGDKLKGSVLVVGGDGRY 64
           S+ +ET+++DGQKPGTSGLRK  + F QEHYTENFIQ+IL ALGDKL GS LVVGGDGRY
Sbjct: 7   SIIIETRIYDGQKPGTSGLRKAVQVFMQEHYTENFIQAILQALGDKLLGSTLVVGGDGRY 66

Query: 65  FGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKH-ILGRLVKVPSSNP 118
           +   AV+KIIKI+AANGV +LI+GQNGILSTPAVS +IRK+  LG +V   S NP
Sbjct: 67  YVKEAVEKIIKIAAANGVKRLIIGQNGILSTPAVSTIIRKYKTLGGIVLTASHNP 121

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|66561330|ref|XP_395366.2| PREDICTED: phosphoglucomutase [Apis mellifera] Back     alignment and taxonomy information
>gi|156537922|ref|XP_001608147.1| PREDICTED: phosphoglucomutase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307205240|gb|EFN83620.1| Phosphoglucomutase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332024861|gb|EGI65049.1| Phosphoglucomutase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|350423965|ref|XP_003493647.1| PREDICTED: phosphoglucomutase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340726378|ref|XP_003401536.1| PREDICTED: phosphoglucomutase-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|307181839|gb|EFN69279.1| Phosphoglucomutase [Camponotus floridanus] Back     alignment and taxonomy information
>gi|223036838|gb|ACM78949.1| phosphoglucomutase [Locusta migratoria] Back     alignment and taxonomy information
>gi|383847991|ref|XP_003699636.1| PREDICTED: phosphoglucomutase-like [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query131
CGD|CAL0005135 560 PGM2 [Candida albicans (taxid: 0.900 0.210 0.616 5.4e-32
FB|FBgn0003076 560 Pgm "phosphoglucose mutase" [D 0.870 0.203 0.618 9.5e-31
UNIPROTKB|Q7KHA1 560 Pgm "Phosphoglucomutase" [Dros 0.870 0.203 0.618 1.2e-30
SGD|S000004711 569 PGM2 "Phosphoglucomutase" [Sac 0.900 0.207 0.549 4.8e-29
UNIPROTKB|Q75DP6 568 ABL029W "ABL029Wp" [Ashbya gos 0.900 0.207 0.532 6.1e-29
WB|WBGene00019890 568 R05F9.6 [Caenorhabditis elegan 0.847 0.195 0.633 6.1e-29
UNIPROTKB|Q21742 568 R05F9.6 "Protein R05F9.6" [Cae 0.847 0.195 0.633 6.1e-29
TAIR|locus:2033583 662 PGM2 "phosphoglucomutase 2" [A 0.809 0.160 0.560 1.7e-28
DICTYBASE|DDB_G0288483 572 pgmA "phosphoglucomutase A" [D 0.893 0.204 0.521 6.1e-27
UNIPROTKB|A8J8Z1 600 GPM1a "Phosphoglucomutase" [Ch 0.847 0.185 0.526 2.5e-26
CGD|CAL0005135 PGM2 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
 Score = 354 (129.7 bits), Expect = 5.4e-32, P = 5.4e-32
 Identities = 74/120 (61%), Positives = 88/120 (73%)

Query:     1 MSFKSV-TVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGDKLKGSVLVVG 59
             MS  S+ T+ETK F  QKPGTSGLRK    FQQ HYTENFIQSIL A+ +  +GS LV+G
Sbjct:     1 MSELSIKTIETKPFQDQKPGTSGLRKKVTVFQQPHYTENFIQSILDAIPEGSQGSTLVIG 60

Query:    60 GDGRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIR-KHILGRLVKVPSSNP 118
             GDGR++ DV +  IIKI+AANGV KLI+GQNGILSTPA S +IR K   G ++   S NP
Sbjct:    61 GDGRFYNDVVIQLIIKIAAANGVKKLILGQNGILSTPATSHVIRIKQATGGIILTASHNP 120
GO:0004614 "phosphoglucomutase activity" evidence=IEA
GO:0005634 "nucleus" evidence=IEA
GO:0005829 "cytosol" evidence=IEA
GO:0019388 "galactose catabolic process" evidence=IEA
GO:0005978 "glycogen biosynthetic process" evidence=IEA
GO:0005992 "trehalose biosynthetic process" evidence=IEA
GO:0006011 "UDP-glucose metabolic process" evidence=IEA
GO:0019255 "glucose 1-phosphate metabolic process" evidence=IEA
GO:0006874 "cellular calcium ion homeostasis" evidence=IEA
FB|FBgn0003076 Pgm "phosphoglucose mutase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q7KHA1 Pgm "Phosphoglucomutase" [Drosophila simulans (taxid:7240)] Back     alignment and assigned GO terms
SGD|S000004711 PGM2 "Phosphoglucomutase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|Q75DP6 ABL029W "ABL029Wp" [Ashbya gossypii ATCC 10895 (taxid:284811)] Back     alignment and assigned GO terms
WB|WBGene00019890 R05F9.6 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q21742 R05F9.6 "Protein R05F9.6" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TAIR|locus:2033583 PGM2 "phosphoglucomutase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0288483 pgmA "phosphoglucomutase A" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|A8J8Z1 GPM1a "Phosphoglucomutase" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P57749PGM_ASPOR5, ., 4, ., 2, ., 20.54620.88540.2090yesN/A
Q9VUY9PGM_DROME5, ., 4, ., 2, ., 20.60500.90070.2107yesN/A
Q4WY53PGM_ASPFU5, ., 4, ., 2, ., 20.52940.88540.2090yesN/A
P00949PGM1_RABIT5, ., 4, ., 2, ., 20.52540.87780.2046yesN/A
Q9P931PGM_EMENI5, ., 4, ., 2, ., 20.53780.88540.2086yesN/A
P39671PGM_RHIRD5, ., 4, ., 2, ., 20.53090.84730.2047yesN/A
P38652PGM1_RAT5, ., 4, ., 2, ., 20.52540.87780.2046yesN/A
Q08DP0PGM1_BOVIN5, ., 4, ., 2, ., 20.52540.87780.2046yesN/A
Q9D0F9PGM1_MOUSE5, ., 4, ., 2, ., 20.52540.87780.2046yesN/A
Q23919PGM1_DICDI5, ., 4, ., 2, ., 20.52100.89310.2045yesN/A
O74374PGM_SCHPO5, ., 4, ., 2, ., 20.51780.84730.2003yesN/A
P37012PGM2_YEAST5, ., 4, ., 2, ., 20.54910.90070.2073yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer5.4.2.2LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query131
cd03085 548 cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyz 2e-57
PLN02307 579 PLN02307, PLN02307, phosphoglucomutase 2e-47
COG0033 524 COG0033, Pgm, Phosphoglucomutase [Carbohydrate tra 3e-35
PRK07564 543 PRK07564, PRK07564, phosphoglucomutase; Validated 3e-34
pfam02878138 pfam02878, PGM_PMM_I, Phosphoglucomutase/phosphoma 5e-18
TIGR03990 443 TIGR03990, Arch_GlmM, phosphoglucosamine mutase 1e-04
COG1109 464 COG1109, {ManB}, Phosphomannomutase [Carbohydrate 0.001
cd03087 439 cd03087, PGM_like1, This archaeal PGM-like (phosph 0.002
>gnl|CDD|100087 cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes Back     alignment and domain information 
 Score =  185 bits (472), Expect = 2e-57
 Identities = 72/115 (62%), Positives = 86/115 (74%), Gaps = 2/115 (1%)

Query: 6   VTVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGD-KLKGSVLVVGGDGRY 64
            TV TK ++GQKPGTSGLRK  K FQQ +Y ENF+QSI  AL   KLKG+ LVVGGDGRY
Sbjct: 1   QTVPTKPYEGQKPGTSGLRKKVKVFQQPNYLENFVQSIFNALPPEKLKGATLVVGGDGRY 60

Query: 65  FGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRK-HILGRLVKVPSSNP 118
           +   A+  IIKI+AANGV K++VGQNG+LSTPAVSA+IRK    G ++   S NP
Sbjct: 61  YNKEAIQIIIKIAAANGVGKVVVGQNGLLSTPAVSAVIRKRKATGGIILTASHNP 115

In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model. Length = 548
>gnl|CDD|177942 PLN02307, PLN02307, phosphoglucomutase Back     alignment and domain information
>gnl|CDD|223111 COG0033, Pgm, Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|236050 PRK07564, PRK07564, phosphoglucomutase; Validated Back     alignment and domain information
>gnl|CDD|217263 pfam02878, PGM_PMM_I, Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Back     alignment and domain information
>gnl|CDD|234431 TIGR03990, Arch_GlmM, phosphoglucosamine mutase Back     alignment and domain information
>gnl|CDD|224034 COG1109, {ManB}, Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|100089 cd03087, PGM_like1, This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 131
cd03085 548 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bid 100.0
PLN02307 579 phosphoglucomutase 100.0
PTZ00150 584 phosphoglucomutase-2-like protein; Provisional 100.0
PF02878137 PGM_PMM_I: Phosphoglucomutase/phosphomannomutase, 100.0
COG1109 464 {ManB} Phosphomannomutase [Carbohydrate transport 100.0
PRK07564 543 phosphoglucomutase; Validated 100.0
PRK14324 446 glmM phosphoglucosamine mutase; Provisional 99.98
PRK14317 465 glmM phosphoglucosamine mutase; Provisional 99.97
PRK14323 440 glmM phosphoglucosamine mutase; Provisional 99.97
cd03089 443 PMM_PGM The phosphomannomutase/phosphoglucomutase 99.97
cd05802 434 GlmM GlmM is a bacterial phosphoglucosamine mutase 99.97
PRK14316 448 glmM phosphoglucosamine mutase; Provisional 99.97
PRK15414 456 phosphomannomutase CpsG; Provisional 99.97
TIGR01132 543 pgm phosphoglucomutase, alpha-D-glucose phosphate- 99.97
cd05801 522 PGM_like3 This bacterial PGM-like (phosphoglucomut 99.97
cd05803 445 PGM_like4 This PGM-like (phosphoglucomutase-like) 99.97
PRK14315 448 glmM phosphoglucosamine mutase; Provisional 99.97
cd05805 441 MPG1_transferase GTP-mannose-1-phosphate guanyltra 99.97
PRK14320 443 glmM phosphoglucosamine mutase; Provisional 99.97
PRK14318 448 glmM phosphoglucosamine mutase; Provisional 99.97
PRK14321 449 glmM phosphoglucosamine mutase; Provisional 99.97
TIGR01455 443 glmM phosphoglucosamine mutase. This model describ 99.97
cd05800 461 PGM_like2 This PGM-like (phosphoglucomutase-like) 99.97
PRK14314 450 glmM phosphoglucosamine mutase; Provisional 99.97
cd05799 487 PGM2 This CD includes PGM2 (phosphoglucomutase 2) 99.97
PRK10887 443 glmM phosphoglucosamine mutase; Provisional 99.97
cd03088 459 ManB ManB is a bacterial phosphomannomutase (PMM) 99.97
PRK09542 445 manB phosphomannomutase/phosphoglucomutase; Review 99.97
PRK14322 429 glmM phosphoglucosamine mutase; Provisional 99.96
cd03087 439 PGM_like1 This archaeal PGM-like (phosphoglucomuta 99.96
PRK14319 430 glmM phosphoglucosamine mutase; Provisional 99.96
PLN02371 583 phosphoglucosamine mutase family protein 99.96
KOG1220|consensus 607 99.95
COG0033 524 Pgm Phosphoglucomutase [Carbohydrate transport and 99.95
KOG0625|consensus 558 99.94
cd03084 355 phosphohexomutase The alpha-D-phosphohexomutase su 99.12
PLN02895 562 phosphoacetylglucosamine mutase 98.96
PTZ00302 585 N-acetylglucosamine-phosphate mutase; Provisional 98.89
cd03086 513 PGM3 PGM3 (phosphoglucomutase 3), also known as PA 98.84
PLN02895 562 phosphoacetylglucosamine mutase 98.61
cd03086 513 PGM3 PGM3 (phosphoglucomutase 3), also known as PA 98.16
PTZ00302 585 N-acetylglucosamine-phosphate mutase; Provisional 98.09
KOG2537|consensus 539 97.23
KOG2537|consensus 539 96.89
PRK08621142 galactose-6-phosphate isomerase subunit LacA; Revi 85.7
COG0426388 FpaA Uncharacterized flavoproteins [Energy product 85.54
TIGR01118141 lacA galactose-6-phosphate isomerase, LacA subunit 84.15
PF02502140 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: 82.91
PRK12613141 galactose-6-phosphate isomerase subunit LacA; Prov 82.82
PRK05571148 ribose-5-phosphate isomerase B; Provisional 80.49
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes Back     alignment and domain information 
Probab=100.00  E-value=8.7e-37  Score=265.47  Aligned_cols=119  Identities=60%  Similarity=0.899  Sum_probs=106.9

Q ss_pred             eeeecccCCCCCCCcCCccccCCcccchHHHHHHHHHHHHHhccc-CCCCeEEEEecCCcCHHHHHHHHHHHHHHCCCcE
Q psy5981           6 VTVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALGDK-LKGSVLVVGGDGRYFGDVAVDKIIKISAANGVAK   84 (131)
Q Consensus         6 ~~~~~~~~~~~~FGT~GiRg~~g~~~~~~~~~~~~~ai~~~~~~~-~~~~~vvVG~D~R~~s~~~a~~~a~~L~~~Gi~V   84 (131)
                      +++||+||++++|||+||||+++++++++++.+++++++.++.+. .++++|+||||+|++|++|+++++++|+++|++|
T Consensus         1 ~~~~~~~~~~~~Fgt~giRG~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~VvVG~D~R~~S~~~a~~~a~~L~~~G~~V   80 (548)
T cd03085           1 QTVPTKPYEGQKPGTSGLRKKVKVFQQPNYLENFVQSIFNALPPEKLKGATLVVGGDGRYYNKEAIQIIIKIAAANGVGK   80 (548)
T ss_pred             CccCCcCCCCCCCCcccccEeeccccCHHHHHHHHHHHHHHHHhccCCCCeEEEEECCCcChHHHHHHHHHHHHHCCCeE
Confidence            589999999999999999999999999999999999886665432 1223699999999999999999999999999999


Q ss_pred             EEecCCccccchHHHHHHHHh-cCceEEEcCCCCC---CCCCCC
Q psy5981          85 LIVGQNGILSTPAVSALIRKH-ILGRLVKVPSSNP---SRTIRP  124 (131)
Q Consensus        85 ~~~~~~g~~PTP~vsfav~~~-~~~GImITASHNP---~~~ng~  124 (131)
                      +++.++|++|||+++|+++++ +++||||||||||   ++|||=
T Consensus        81 ~~~~~~G~~pTP~l~fav~~~~a~gGImITASHNP~~~~eyNGi  124 (548)
T cd03085          81 VVVGQNGLLSTPAVSAVIRKRKATGGIILTASHNPGGPEGDFGI  124 (548)
T ss_pred             EEeCCCCccCchHHHHHHHhcCCCeEEEEecCCCCCCCCcCCcE
Confidence            998655899999999999999 9999999999999   799983

In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl t
>PLN02307 phosphoglucomutase Back     alignment and domain information
>PTZ00150 phosphoglucomutase-2-like protein; Provisional Back     alignment and domain information
>PF02878 PGM_PMM_I: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; InterPro: IPR005844 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK07564 phosphoglucomutase; Validated Back     alignment and domain information
>PRK14324 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14317 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14323 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e Back     alignment and domain information
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>PRK14316 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK15414 phosphomannomutase CpsG; Provisional Back     alignment and domain information
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific Back     alignment and domain information
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes Back     alignment and domain information
>PRK14315 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity Back     alignment and domain information
>PRK14320 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14318 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14321 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>TIGR01455 glmM phosphoglucosamine mutase Back     alignment and domain information
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>PRK14314 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1) Back     alignment and domain information
>PRK10887 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate Back     alignment and domain information
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed Back     alignment and domain information
>PRK14322 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>PRK14319 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PLN02371 phosphoglucosamine mutase family protein Back     alignment and domain information
>KOG1220|consensus Back     alignment and domain information
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0625|consensus Back     alignment and domain information
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>PLN02895 phosphoacetylglucosamine mutase Back     alignment and domain information
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional Back     alignment and domain information
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway Back     alignment and domain information
>PLN02895 phosphoacetylglucosamine mutase Back     alignment and domain information
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway Back     alignment and domain information
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional Back     alignment and domain information
>KOG2537|consensus Back     alignment and domain information
>KOG2537|consensus Back     alignment and domain information
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed Back     alignment and domain information
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] Back     alignment and domain information
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit Back     alignment and domain information
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB) Back     alignment and domain information
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional Back     alignment and domain information
>PRK05571 ribose-5-phosphate isomerase B; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query131
1lxt_A 561 Structure Of Phosphotransferase Phosphoglucomutase 8e-27
1jdy_A 561 Rabbit Muscle Phosphoglucomutase Length = 561 3e-26
1kfi_A 572 Crystal Structure Of The Exocytosis-Sensitive Phosp 4e-21
>pdb|1LXT|A Chain A, Structure Of Phosphotransferase Phosphoglucomutase From Rabbit Length = 561 Back     alignment and structure 
Iteration: 1

 Score =  115 bits (287), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/118 (52%), Positives = 85/118 (72%), Gaps = 3/118 (2%)
Query: 4   KSVTVETKVFDGQKPGTSGLRKPTKTFQQE-HYTENFIQSILTALG-DKLKGSVLVVGGD 61
           K VTV+TK +  QKPGTSGLRK  K FQ   +Y ENFIQSI++ +   + + + LVVGGD
Sbjct: 2   KIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGD 61
Query: 62  GRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRK-HILGRLVKVPSSNP 118
           GR++   A+  I++I+AANG+ +L++GQNGILSTPAVS +IRK   +G ++   S NP
Sbjct: 62  GRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNP 119
>pdb|1JDY|A Chain A, Rabbit Muscle Phosphoglucomutase Length = 561 Back     alignment and structure
>pdb|1KFI|A Chain A, Crystal Structure Of The Exocytosis-Sensitive Phosphoprotein, Pp63PARAFUSIN (PHOSPHOGLUCOMUTASE) FROM Paramecium Length = 572 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query131
3pmg_A 561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 6e-41
1kfi_A 572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 1e-38
3na5_A 570 Phosphoglucomutase; isomerase, metal binding; HET: 9e-32
2z0f_A 524 Putative phosphoglucomutase; isomerase, magnesium, 1e-24
1tuo_A 464 Putative phosphomannomutase; thermus thermophilus 9e-06
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Length = 561 Back     alignment and structure
 Score =  141 bits (358), Expect = 6e-41
 Identities = 62/118 (52%), Positives = 85/118 (72%), Gaps = 3/118 (2%)

Query: 4   KSVTVETKVFDGQKPGTSGLRKPTKTFQQ-EHYTENFIQSILTALGD-KLKGSVLVVGGD 61
           K VTV+TK +  QKPGTSGLRK  K FQ   +Y ENFIQSI++ +   + + + LVVGGD
Sbjct: 2   KIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGD 61

Query: 62  GRYFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKH-ILGRLVKVPSSNP 118
           GR++   A+  I++I+AANG+ +L++GQNGILSTPAVS +IRK   +G ++   S NP
Sbjct: 62  GRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNP 119
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Length = 572 Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Length = 570 Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Length = 524 Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Length = 464 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query131
3pmg_A 561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 100.0
3pdk_A 469 Phosphoglucosamine mutase; 4-domain architecture, 100.0
3i3w_A 443 Phosphoglucosamine mutase; csgid, IDP02164, isomer 100.0
2f7l_A 455 455AA long hypothetical phospho-sugar mutase; phos 100.0
1wqa_A 455 Phospho-sugar mutase; alpha-beta protein, unphosph 100.0
1tuo_A 464 Putative phosphomannomutase; thermus thermophilus 100.0
1p5d_X 463 PMM, phosphomannomutase; alpha/beta protein, phosp 100.0
3na5_A 570 Phosphoglucomutase; isomerase, metal binding; HET: 100.0
2z0f_A 524 Putative phosphoglucomutase; isomerase, magnesium, 100.0
1kfi_A 572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 100.0
3uw2_A 485 Phosphoglucomutase/phosphomannomutase family PROT; 100.0
4hjh_A 481 Phosphomannomutase; structural genomics, niaid, na 100.0
2dka_A 544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 99.2
2dka_A 544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 97.94
4dik_A410 Flavoprotein; TM0755, electron transport, DI-iron 88.46
3fni_A159 Putative diflavin flavoprotein A 3; alpha-beta pro 86.4
1o1x_A155 Ribose-5-phosphate isomerase RPIB; structural geno 85.71
2vvp_A162 Ribose-5-phosphate isomerase B; RPIB, RV2465C, RAR 83.91
2vvr_A149 Ribose-5-phosphate isomerase B; RPIB, carbohydrate 83.88
3hly_A161 Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein 82.17
3he8_A149 Ribose-5-phosphate isomerase; CTRPI B, isomerizati 80.74
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Back     alignment and structure
Probab=100.00  E-value=5.5e-36  Score=259.30  Aligned_cols=120  Identities=51%  Similarity=0.828  Sum_probs=106.2

Q ss_pred             eeeeeecccCCCCCCCcCCccccCCcc-cchHHHHHHHHHHHHHhccc-CCCCeEEEEecCCcCHHHHHHHHHHHHHHCC
Q psy5981           4 KSVTVETKVFDGQKPGTSGLRKPTKTF-QQEHYTENFIQSILTALGDK-LKGSVLVVGGDGRYFGDVAVDKIIKISAANG   81 (131)
Q Consensus         4 ~~~~~~~~~~~~~~FGT~GiRg~~g~~-~~~~~~~~~~~ai~~~~~~~-~~~~~vvVG~D~R~~s~~~a~~~a~~L~~~G   81 (131)
                      ++++|+|.||.+|+|||+|+||.++.| .+.+++.+|+++++.+++.. .++.+|+||||+|++|++|+++++++|+++|
T Consensus         2 ~~~~~~~~~~~~~~fGTsGiRG~v~~~~~~~~~t~~f~~~l~~A~g~~~~~g~~VvVG~D~R~~s~~~~~~~a~~l~a~G   81 (561)
T 3pmg_A            2 KIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANG   81 (561)
T ss_dssp             CCEEEECCCCSCCCCBTTBEEEEHHHHHHSTTHHHHHHHHHHHTSCGGGTTTCEEEEEECCCTTHHHHHHHHHHHHHHTT
T ss_pred             cceEEecccCCCCCCCCCCcCeeeCCCCCCcCccHHHHHHHHHHHHhhhcCCCEEEEEeCCCccHHHHHHHHHHHHHHCC
Confidence            578999999999999999999999876 45577888888888877532 2346799999999999999999999999999


Q ss_pred             CcEEEecCCccccchHHHHHHHHh-cCceEEEcCCCCCC---CCCC
Q psy5981          82 VAKLIVGQNGILSTPAVSALIRKH-ILGRLVKVPSSNPS---RTIR  123 (131)
Q Consensus        82 i~V~~~~~~g~~PTP~vsfav~~~-~~~GImITASHNP~---~~ng  123 (131)
                      ++|+++.++|++|||+++|+++++ +++||||||||||+   +|||
T Consensus        82 v~V~~~~~~g~~pTP~vs~av~~~~a~gGImITASHNP~~~~~~nG  127 (561)
T 3pmg_A           82 IGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFG  127 (561)
T ss_dssp             CCEEEEEEEEECCHHHHHHHHHHHTCSEEEEECCTTSCCSTTSEEE
T ss_pred             CEEEEecCCCccCHHHHHHHHHHhcCCeEEEEEeCCCCCCCCCcce
Confidence            999998555899999999999999 99999999999995   4666
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis} Back     alignment and structure
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp} Back     alignment and structure
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii} Back     alignment and structure
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Back     alignment and structure
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X* Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Back     alignment and structure
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Back     alignment and structure
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis} Back     alignment and structure
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV} Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Back     alignment and structure
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* Back     alignment and structure
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A Back     alignment and structure
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1 Back     alignment and structure
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A Back     alignment and structure
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A Back     alignment and structure
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301} Back     alignment and structure
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 131
d1kfia1203 c.84.1.1 (A:3-205) Exocytosis-sensitive phosphopro 3e-31
d3pmga1190 c.84.1.1 (A:1-190) Phosphoglucomutase {Rabbit (Ory 1e-21
>d1kfia1 c.84.1.1 (A:3-205) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Length = 203 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Exocytosis-sensitive phosphoprotein, pp63/parafusin
species: Paramecium tetraurelia [TaxId: 5888]

 Score =  108 bits (270), Expect = 3e-31
 Identities = 48/102 (47%), Positives = 64/102 (62%), Gaps = 2/102 (1%)

Query: 6   VTVETKVFDGQKPGTSGLRKPTKTFQQEHYTENFIQSILTALG--DKLKGSVLVVGGDGR 63
               T+ + GQKPGTSGLRK      Q +Y ENF+QSI   L   +    +VL VGGDGR
Sbjct: 7   RVQVTQPYAGQKPGTSGLRKKVSEATQPNYLENFVQSIFNTLRKDELKPKNVLFVGGDGR 66

Query: 64  YFGDVAVDKIIKISAANGVAKLIVGQNGILSTPAVSALIRKH 105
           YF   A+  II+++ AN ++++ VGQ G++STPA S  IRK 
Sbjct: 67  YFNRQAIFSIIRLAYANDISEVHVGQAGLMSTPASSHYIRKV 108
>d3pmga1 c.84.1.1 (A:1-190) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 190 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query131
d3pmga1190 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 100.0
d1kfia1203 Exocytosis-sensitive phosphoprotein, pp63/parafusi 100.0
d1p5dx1146 Phosphomannomutase/phosphoglucomutase {Pseudomonas 100.0
d7reqa2168 Methylmalonyl-CoA mutase alpha subunit, C-terminal 91.91
d1e5da1152 Rubredoxin oxygen:oxidoreductase (ROO), C-terminal 90.44
d1ycga1149 Nitric oxide reductase C-terminal domain {Moorella 88.66
d1nn4a_159 Alternate ribose 5-phosphate isomerase B, RpiB {Es 87.96
d1vmea1148 ROO-like flavoprotein TM0755, C-terminal domain {T 87.93
d1ccwa_137 Glutamate mutase, small subunit {Clostridium cochl 87.34
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 82.44
d2vvpa1156 Alternate ribose 5-phosphate isomerase B, RpiB {My 81.31
d1fuia2 355 L-fucose isomerase, N-terminal and second domains 80.12
>d3pmga1 c.84.1.1 (A:1-190) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Phosphoglucomutase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.6e-42  Score=264.60  Aligned_cols=120  Identities=51%  Similarity=0.821  Sum_probs=107.2

Q ss_pred             eeeeeeecccCCCCCCCcCCccccCCcc-cchHHHHHHHHHHHHHhccc-CCCCeEEEEecCCcCHHHHHHHHHHHHHHC
Q psy5981           3 FKSVTVETKVFDGQKPGTSGLRKPTKTF-QQEHYTENFIQSILTALGDK-LKGSVLVVGGDGRYFGDVAVDKIIKISAAN   80 (131)
Q Consensus         3 ~~~~~~~~~~~~~~~FGT~GiRg~~g~~-~~~~~~~~~~~ai~~~~~~~-~~~~~vvVG~D~R~~s~~~a~~~a~~L~~~   80 (131)
                      +++++|||.+|.+++||||||||+++++ .+++++.++++++++++.+. .+.++|+||||+|++|++|+++++++|+++
T Consensus         1 ~~~~~~~~~~~~~~kfGTdGiRG~~g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vvIG~D~R~ss~~~a~~~a~~l~~~   80 (190)
T d3pmga1           1 VKIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAAN   80 (190)
T ss_dssp             CCCEEEECCCCSCCCCBTTBEEEEHHHHHHSTTHHHHHHHHHHHTSCGGGTTTCEEEEEECCCTTHHHHHHHHHHHHHHT
T ss_pred             CceEEecCcccCCCCCcCcccCcccCCCCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEeCCCcCHHHHHHHHHHHHHhc
Confidence            3689999999999999999999999974 45678889999999988743 345689999999999999999999999999


Q ss_pred             CCcEEEecCCccccchHHHHHHHHh-cCceEEEcCCCCCCCCC
Q psy5981          81 GVAKLIVGQNGILSTPAVSALIRKH-ILGRLVKVPSSNPSRTI  122 (131)
Q Consensus        81 Gi~V~~~~~~g~~PTP~vsfav~~~-~~~GImITASHNP~~~n  122 (131)
                      |++|+.+.+.|++|||+++|+++++ +++||||||||||++||
T Consensus        81 g~~v~~~~~~g~~pTP~~~~~~~~~~~~~GimITASHNP~ep~  123 (190)
T d3pmga1          81 GIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPN  123 (190)
T ss_dssp             TCCEEEEEEEEECCHHHHHHHHHHHTCSEEEEECCTTSCCSTT
T ss_pred             cceeEEecCCCcccchHHHHHHHhcCCceEEEEccccCCCCcC
Confidence            9999876555899999999999999 99999999999999854
>d1kfia1 c.84.1.1 (A:3-205) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure
>d1p5dx1 c.84.1.1 (X:9-154) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} Back     information, alignment and structure
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]} Back     information, alignment and structure
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
>d1nn4a_ c.121.1.1 (A:) Alternate ribose 5-phosphate isomerase B, RpiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2vvpa1 c.121.1.1 (A:3-158) Alternate ribose 5-phosphate isomerase B, RpiB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and second domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure