Psyllid ID: psy5987

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------
MTAQVNKKSSSTGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLKV
cEEEEccccccccHHHHHHHHHHHHHHHccEEEEEcccccccccccccEEEcccccHHHHHHccccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccc
cEEEEEcccccccHHHHHHHHHHHHHHcccEEEEEEccccccccccccEEEEcccccccccccccccccccccHHHHcHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccEEEEEEEcccccccccccEEHHHHHHHHHHHHHHHHHHHHHHccEEEEEEcccccc
mtaqvnkkssstgmNAAVRACVRMGIYLGCKVFFIKEgyqgmvdggdNIVEANWSSVSSIIHkggtvigsarcsDFREKAGRLKAAKNLIDRGITNLVViggdgsltganlfRQEWPELLDQLLKdgsitkdqREKYCHLHIAGLvgsidndfcgtdmtigtDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLKV
mtaqvnkkssstgmnaAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLKV
MTAQVNKKSSSTGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLKV
***************AAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIMEVM*****
MTAQVNKKSSSTGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLK*
*************MNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLKV
MTAQVNKKSSSTGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLK*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTAQVNKKSSSTGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query197 2.2.26 [Sep-21-2011]
P52034 788 6-phosphofructokinase OS= yes N/A 0.791 0.197 0.836 5e-88
Q01813 784 6-phosphofructokinase typ yes N/A 0.822 0.206 0.722 6e-76
Q5R636 784 6-phosphofructokinase typ yes N/A 0.822 0.206 0.722 3e-75
P47859 791 6-phosphofructokinase typ yes N/A 0.822 0.204 0.722 4e-74
P47860 788 6-phosphofructokinase typ yes N/A 0.802 0.200 0.717 8e-74
Q27665 789 6-phosphofructokinase OS= N/A N/A 0.807 0.201 0.706 1e-73
Q0IIG5 779 6-phosphofructokinase, mu no N/A 0.802 0.202 0.711 2e-73
Q2HYU2 780 6-phosphofructokinase, mu no N/A 0.802 0.202 0.711 2e-73
Q9WUA3 784 6-phosphofructokinase typ yes N/A 0.822 0.206 0.711 3e-73
Q60HD9 780 6-phosphofructokinase, mu N/A N/A 0.822 0.207 0.711 5e-73
>sp|P52034|K6PF_DROME 6-phosphofructokinase OS=Drosophila melanogaster GN=Pfk PE=2 SV=2 Back     alignment and function desciption
 Score =  323 bits (828), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 154/184 (83%), Positives = 168/184 (91%)

Query: 11  STGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGS 70
           S GMNAAVRACVRM IYLGCKV+FI+EGYQGMVDGGD I EANW+SVSSIIH+GGT+IGS
Sbjct: 29  SQGMNAAVRACVRMAIYLGCKVYFIREGYQGMVDGGDCIQEANWASVSSIIHRGGTIIGS 88

Query: 71  ARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSIT 130
           ARC DFRE+ GRLKAA NLI RGITNLVVIGGDGSLTGANLFRQEW  LLD+L+K+ +IT
Sbjct: 89  ARCQDFRERQGRLKAANNLIQRGITNLVVIGGDGSLTGANLFRQEWSSLLDELVKNKTIT 148

Query: 131 KDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIME 190
            +Q+EK+  LHI GLVGSIDNDFCGTDMTIGTD+ALHRIIEAIDAI STAYSHQRTFIME
Sbjct: 149 TEQQEKFNVLHIVGLVGSIDNDFCGTDMTIGTDTALHRIIEAIDAISSTAYSHQRTFIME 208

Query: 191 VMGR 194
           VMGR
Sbjct: 209 VMGR 212

Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 1
>sp|Q01813|K6PP_HUMAN 6-phosphofructokinase type C OS=Homo sapiens GN=PFKP PE=1 SV=2 Back     alignment and function description
>sp|Q5R636|K6PP_PONAB 6-phosphofructokinase type C OS=Pongo abelii GN=PFKP PE=2 SV=1 Back     alignment and function description
>sp|P47859|K6PP_RABIT 6-phosphofructokinase type C OS=Oryctolagus cuniculus GN=PFKP PE=1 SV=1 Back     alignment and function description
>sp|P47860|K6PP_RAT 6-phosphofructokinase type C OS=Rattus norvegicus GN=Pfkp PE=1 SV=2 Back     alignment and function description
>sp|Q27665|K6PF_HAECO 6-phosphofructokinase OS=Haemonchus contortus GN=PFK PE=2 SV=1 Back     alignment and function description
>sp|Q0IIG5|K6PF_BOVIN 6-phosphofructokinase, muscle type OS=Bos taurus GN=PFKM PE=2 SV=1 Back     alignment and function description
>sp|Q2HYU2|K6PF_PIG 6-phosphofructokinase, muscle type OS=Sus scrofa GN=PFKM PE=2 SV=1 Back     alignment and function description
>sp|Q9WUA3|K6PP_MOUSE 6-phosphofructokinase type C OS=Mus musculus GN=Pfkp PE=1 SV=1 Back     alignment and function description
>sp|Q60HD9|K6PF_MACFA 6-phosphofructokinase, muscle type OS=Macaca fascicularis GN=PFKM PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query197
357628229 854 hypothetical protein KGM_04639 [Danaus p 0.791 0.182 0.869 3e-90
158285290 789 AGAP007642-PA [Anopheles gambiae str. PE 0.771 0.192 0.869 4e-89
170045475 793 6-phosphofructokinase [Culex quinquefasc 0.791 0.196 0.853 1e-88
242025478 792 6-phosphofructokinase, putative [Pedicul 0.771 0.191 0.847 1e-88
157114499 790 phosphofructokinase [Aedes aegypti] gi|1 0.791 0.197 0.864 2e-88
350423386 991 PREDICTED: 6-phosphofructokinase-like is 0.827 0.164 0.844 5e-88
383862902 996 PREDICTED: 6-phosphofructokinase-like [M 0.827 0.163 0.838 9e-88
340720229 991 PREDICTED: 6-phosphofructokinase-like is 0.827 0.164 0.838 9e-88
198458608 788 GA17840 [Drosophila pseudoobscura pseudo 0.791 0.197 0.842 2e-87
195154689 788 GL17610 [Drosophila persimilis] gi|19411 0.791 0.197 0.842 2e-87
>gi|357628229|gb|EHJ77619.1| hypothetical protein KGM_04639 [Danaus plexippus] Back     alignment and taxonomy information
 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 160/184 (86%), Positives = 171/184 (92%)

Query: 11  STGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGS 70
           S GMNAAVR+ VRMGIYLGCKV+FI+EGYQGMVDGGDNI EANWSSVSSIIHKGGT+IGS
Sbjct: 29  SQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSIIHKGGTIIGS 88

Query: 71  ARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSIT 130
           ARC DF ++ GRLKAA NL+ RGITNLVVIGGDGSLTGANLFRQEW  LLD+LL++  IT
Sbjct: 89  ARCMDFMKREGRLKAASNLVTRGITNLVVIGGDGSLTGANLFRQEWSSLLDELLENNRIT 148

Query: 131 KDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIME 190
           KDQREKY HLHIAG+VGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIME
Sbjct: 149 KDQREKYKHLHIAGMVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIME 208

Query: 191 VMGR 194
           VMGR
Sbjct: 209 VMGR 212

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|158285290|ref|XP_564589.3| AGAP007642-PA [Anopheles gambiae str. PEST] gi|157019920|gb|EAL41738.3| AGAP007642-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|170045475|ref|XP_001850333.1| 6-phosphofructokinase [Culex quinquefasciatus] gi|167868507|gb|EDS31890.1| 6-phosphofructokinase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|242025478|ref|XP_002433151.1| 6-phosphofructokinase, putative [Pediculus humanus corporis] gi|212518692|gb|EEB20413.1| 6-phosphofructokinase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|157114499|ref|XP_001652300.1| phosphofructokinase [Aedes aegypti] gi|108877243|gb|EAT41468.1| AAEL006895-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|350423386|ref|XP_003493466.1| PREDICTED: 6-phosphofructokinase-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|383862902|ref|XP_003706922.1| PREDICTED: 6-phosphofructokinase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340720229|ref|XP_003398544.1| PREDICTED: 6-phosphofructokinase-like isoform 1 [Bombus terrestris] Back     alignment and taxonomy information
>gi|198458608|ref|XP_001361103.2| GA17840 [Drosophila pseudoobscura pseudoobscura] gi|198136401|gb|EAL25679.2| GA17840 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195154689|ref|XP_002018254.1| GL17610 [Drosophila persimilis] gi|194114050|gb|EDW36093.1| GL17610 [Drosophila persimilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query197
FB|FBgn0003071 788 Pfk "Phosphofructokinase" [Dro 0.934 0.233 0.836 6e-80
ZFIN|ZDB-GENE-091112-22 787 pfkpa "phosphofructokinase, pl 0.974 0.243 0.713 9.9e-71
UNIPROTKB|F1RX49228 PFKP "Uncharacterized protein" 0.923 0.798 0.736 9.9e-71
UNIPROTKB|F1PKS1 772 PFKP "6-phosphofructokinase" [ 0.934 0.238 0.728 2.1e-70
UNIPROTKB|Q01813 784 PFKP "6-phosphofructokinase ty 0.923 0.232 0.730 7e-70
UNIPROTKB|F1PKS3 777 PFKP "6-phosphofructokinase" [ 0.918 0.232 0.729 2.4e-69
UNIPROTKB|Q5R636 784 PFKP "6-phosphofructokinase ty 0.923 0.232 0.730 2.4e-69
ZFIN|ZDB-GENE-070912-634 792 pfkpb "phosphofructokinase, pl 0.923 0.229 0.737 3e-69
UNIPROTKB|Q5VSR5210 PFKP "6-phosphofructokinase ty 0.918 0.861 0.729 3e-69
UNIPROTKB|E1BCW3 791 PFKP "6-phosphofructokinase" [ 0.923 0.230 0.719 3.8e-69
FB|FBgn0003071 Pfk "Phosphofructokinase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
 Identities = 154/184 (83%), Positives = 168/184 (91%)

Query:    11 STGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGS 70
             S GMNAAVRACVRM IYLGCKV+FI+EGYQGMVDGGD I EANW+SVSSIIH+GGT+IGS
Sbjct:    29 SQGMNAAVRACVRMAIYLGCKVYFIREGYQGMVDGGDCIQEANWASVSSIIHRGGTIIGS 88

Query:    71 ARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSIT 130
             ARC DFRE+ GRLKAA NLI RGITNLVVIGGDGSLTGANLFRQEW  LLD+L+K+ +IT
Sbjct:    89 ARCQDFRERQGRLKAANNLIQRGITNLVVIGGDGSLTGANLFRQEWSSLLDELVKNKTIT 148

Query:   131 KDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIME 190
              +Q+EK+  LHI GLVGSIDNDFCGTDMTIGTD+ALHRIIEAIDAI STAYSHQRTFIME
Sbjct:   149 TEQQEKFNVLHIVGLVGSIDNDFCGTDMTIGTDTALHRIIEAIDAISSTAYSHQRTFIME 208

Query:   191 VMGR 194
             VMGR
Sbjct:   209 VMGR 212
GO:0005945 "6-phosphofructokinase complex" evidence=IEA;IC
GO:0006096 "glycolysis" evidence=NAS;IMP
GO:0003872 "6-phosphofructokinase activity" evidence=ISS;IMP
GO:0006002 "fructose 6-phosphate metabolic process" evidence=IEA
ZFIN|ZDB-GENE-091112-22 pfkpa "phosphofructokinase, platelet a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RX49 PFKP "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKS1 PFKP "6-phosphofructokinase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q01813 PFKP "6-phosphofructokinase type C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKS3 PFKP "6-phosphofructokinase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R636 PFKP "6-phosphofructokinase type C" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-634 pfkpb "phosphofructokinase, platelet b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q5VSR5 PFKP "6-phosphofructokinase type C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BCW3 PFKP "6-phosphofructokinase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5R636K6PP_PONAB2, ., 7, ., 1, ., 1, 10.72280.82230.2066yesN/A
O42938K6PF_SCHPO2, ., 7, ., 1, ., 1, 10.57600.79690.1666yesN/A
Q9HGZ1K6PF1_ASPOR2, ., 7, ., 1, ., 1, 10.60320.75630.1898yesN/A
Q03215K6PF1_KLULA2, ., 7, ., 1, ., 1, 10.58150.80710.1602yesN/A
P78985K6PF_ASPNG2, ., 7, ., 1, ., 1, 10.56520.78680.1979yesN/A
P47860K6PP_RAT2, ., 7, ., 1, ., 1, 10.71730.80200.2005yesN/A
Q01813K6PP_HUMAN2, ., 7, ., 1, ., 1, 10.72280.82230.2066yesN/A
P59680K6PF1_YARLI2, ., 7, ., 1, ., 1, 10.55970.80710.1668yesN/A
P16861K6PF1_YEAST2, ., 7, ., 1, ., 1, 10.56520.80710.1610yesN/A
P52034K6PF_DROME2, ., 7, ., 1, ., 1, 10.83690.79180.1979yesN/A
Q4W9B8K6PF_ASPFU2, ., 7, ., 1, ., 1, 10.58690.75630.1844yesN/A
Q92448K6PF1_PICPA2, ., 7, ., 1, ., 1, 10.58690.77660.1545yesN/A
Q9WUA3K6PP_MOUSE2, ., 7, ., 1, ., 1, 10.71190.82230.2066yesN/A
P47859K6PP_RABIT2, ., 7, ., 1, ., 1, 10.72280.82230.2048yesN/A
P90521K6PF_DICDI2, ., 7, ., 1, ., 1, 10.58150.92380.2182yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.11LOW CONFIDENCE prediction!
3rd Layer2.7.10.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query197
TIGR02478 746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 1e-118
cd00764 762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 1e-107
pfam00365 279 pfam00365, PFK, Phosphofructokinase 2e-84
cd00363 338 cd00363, PFK, Phosphofructokinase, a key regulator 2e-81
PRK03202 320 PRK03202, PRK03202, 6-phosphofructokinase; Provisi 3e-63
COG0205 347 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate 2e-62
TIGR02482 301 TIGR02482, PFKA_ATP, 6-phosphofructokinase 1e-57
cd00763 317 cd00763, Bacterial_PFK, Phosphofructokinase, a key 2e-49
TIGR02483 324 TIGR02483, PFK_mixed, phosphofructokinase 2e-30
TIGR02478 746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 3e-24
PRK14071 360 PRK14071, PRK14071, 6-phosphofructokinase; Provisi 6e-20
cd00764 762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 1e-19
PTZ00286 459 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Prov 2e-17
PLN02564 484 PLN02564, PLN02564, 6-phosphofructokinase 3e-10
PRK06830 443 PRK06830, PRK06830, diphosphate--fructose-6-phosph 2e-09
PLN02884 411 PLN02884, PLN02884, 6-phosphofructokinase 1e-06
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information 
 Score =  350 bits (901), Expect = e-118
 Identities = 128/184 (69%), Positives = 151/184 (82%)

Query: 11  STGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGS 70
           + GMNAAVRA VRM IY+GC+V+ I+EGYQG+VDGGDNI EA W  V  I+  GGT+IG+
Sbjct: 12  AQGMNAAVRAVVRMAIYVGCRVYAIREGYQGLVDGGDNIEEAQWEDVRGILSLGGTIIGT 71

Query: 71  ARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSIT 130
           ARC +FRE+ GRLKAA+NL+  GI  LVVIGGDGSLTGA+LFR+EWP LL++L+  G IT
Sbjct: 72  ARCKEFRERPGRLKAARNLVSNGIDALVVIGGDGSLTGADLFREEWPSLLEELVDTGKIT 131

Query: 131 KDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIME 190
            +Q E++ HL I GLVGSIDND CGTDMTIG DSALHRI EAIDAI STA SHQR F++E
Sbjct: 132 AEQAEEHRHLTIVGLVGSIDNDMCGTDMTIGADSALHRICEAIDAISSTAQSHQRAFVVE 191

Query: 191 VMGR 194
           VMGR
Sbjct: 192 VMGR 195

Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal). Length = 746
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase Back     alignment and domain information
>gnl|CDD|238216 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|235111 PRK03202, PRK03202, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|223283 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|213713 TIGR02482, PFKA_ATP, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|238388 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|233887 TIGR02483, PFK_mixed, phosphofructokinase Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>gnl|CDD|184487 PRK14071, PRK14071, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|185539 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|235869 PRK06830, PRK06830, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|178472 PLN02884, PLN02884, 6-phosphofructokinase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 197
cd00764 762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
TIGR02478 745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
TIGR02482 301 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokin 100.0
PF00365 282 PFK: Phosphofructokinase; InterPro: IPR000023 The 100.0
cd00763 317 Bacterial_PFK Phosphofructokinase, a key regulator 100.0
COG0205 347 PfkA 6-phosphofructokinase [Carbohydrate transport 100.0
cd00363 338 PFK Phosphofructokinase, a key regulatory enzyme i 100.0
PRK03202 320 6-phosphofructokinase; Provisional 100.0
TIGR02483 324 PFK_mixed phosphofructokinase. Members of this fam 100.0
PRK14072 416 6-phosphofructokinase; Provisional 100.0
PLN02884 411 6-phosphofructokinase 100.0
PRK14071 360 6-phosphofructokinase; Provisional 100.0
PRK06830 443 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
PLN02564 484 6-phosphofructokinase 100.0
PRK06555 403 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
PTZ00286 459 6-phospho-1-fructokinase; Provisional 100.0
TIGR02477 539 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosp 100.0
PRK07085 555 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
PLN03028 610 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
PLN02251 568 pyrophosphate-dependent phosphofructokinase 100.0
cd00765 550 Pyrophosphate_PFK Phosphofructokinase, a key regul 100.0
cd00764 762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
TIGR02478 745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
PTZ00287 1419 6-phosphofructokinase; Provisional 100.0
PTZ00287 1419 6-phosphofructokinase; Provisional 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
KOG2440|consensus 666 100.0
KOG2440|consensus 666 99.87
PRK14077 287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 95.26
PRK00561 259 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 94.66
PRK04761 246 ppnK inorganic polyphosphate/ATP-NAD kinase; Revie 94.64
cd06321 271 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-b 94.27
PLN02929 301 NADH kinase 94.07
PRK04885 265 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 93.99
cd01537 264 PBP1_Repressors_Sugar_Binding_like Ligand-binding 93.7
PF01513 285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 93.34
COG3199 355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 93.2
PRK03501 264 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 92.84
PRK14075 256 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 92.81
PRK01911 292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 92.66
PRK04539 296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 92.61
PRK03378 292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 91.86
PRK02649 305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 91.58
PRK03708 277 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 91.32
PRK03372 306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 91.2
PRK14076 569 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 91.03
PLN02935 508 Bifunctional NADH kinase/NAD(+) kinase 90.52
PRK01231 295 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 90.51
cd08550 349 GlyDH-like Glycerol_dehydrogenase-like. Families o 90.42
cd06299 265 PBP1_LacI_like_13 Ligand-binding domain of DNA-bin 90.16
cd06292 273 PBP1_LacI_like_10 Ligand-binding domain of unchara 89.69
cd06284 267 PBP1_LacI_like_6 Ligand-binding domain of an uncha 89.04
cd08173 339 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro 89.03
cd08170 351 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes ox 88.49
cd06298 268 PBP1_CcpA_like Ligand-binding domain of the catabo 88.32
PRK02231 272 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.28
cd08171 345 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol 87.8
cd06283 267 PBP1_RegR_EndR_KdgR_like Ligand-binding domain of 87.78
PRK09423 366 gldA glycerol dehydrogenase; Provisional 87.72
PRK02155 291 ppnK NAD(+)/NADH kinase family protein; Provisiona 87.59
cd08172 347 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol 87.54
PRK11914 306 diacylglycerol kinase; Reviewed 87.51
cd08195 345 DHQS Dehydroquinate synthase (DHQS) catalyzes the 87.38
PRK02645 305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.29
PF00465 366 Fe-ADH: Iron-containing alcohol dehydrogenase ; In 87.12
COG0061 281 nadF NAD kinase [Coenzyme metabolism] 86.76
PRK00843 350 egsA NAD(P)-dependent glycerol-1-phosphate dehydro 86.73
PRK00002 358 aroB 3-dehydroquinate synthase; Reviewed 86.68
cd08177 337 MAR Maleylacetate reductase is involved in many ar 86.52
PRK01185 271 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 86.51
cd07766 332 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) 86.49
cd08199 354 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi- 86.38
TIGR01357 344 aroB 3-dehydroquinate synthase. This model represe 86.2
cd08180 332 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes 85.72
cd08197 355 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) cataly 85.71
cd08551 370 Fe-ADH iron-containing alcohol dehydrogenases (Fe- 85.66
cd08178 398 AAD_C C-terminal alcohol dehydrogenase domain of t 84.68
cd01542259 PBP1_TreR_like Ligand-binding domain of DNA transc 84.49
PF00532 279 Peripla_BP_1: Periplasmic binding proteins and sug 84.46
PRK10703 341 DNA-binding transcriptional repressor PurR; Provis 84.27
PLN02727 986 NAD kinase 83.97
cd08189 374 Fe-ADH5 Iron-containing alcohol dehydrogenases-lik 83.53
COG0371 360 GldA Glycerol dehydrogenase and related enzymes [E 83.41
PF07905123 PucR: Purine catabolism regulatory protein-like fa 83.36
PRK13054 300 lipid kinase; Reviewed 83.33
cd08185 380 Fe-ADH1 Iron-containing alcohol dehydrogenases-lik 83.09
PRK10423 327 transcriptional repressor RbsR; Provisional 82.8
cd07995208 TPK Thiamine pyrophosphokinase. Thiamine pyrophosp 82.71
cd08196 346 DHQS-like1 Dehydroquinate synthase (DHQS)-like. DH 82.64
PRK13951 488 bifunctional shikimate kinase/3-dehydroquinate syn 82.57
cd08194 375 Fe-ADH6 Iron-containing alcohol dehydrogenases-lik 82.02
PLN02958 481 diacylglycerol kinase/D-erythro-sphingosine kinase 81.56
cd08193 376 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyze 81.45
PLN02834 433 3-dehydroquinate synthase 81.2
cd06278 266 PBP1_LacI_like_2 Ligand-binding domain of uncharac 80.84
cd08181 357 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 80.74
PRK10586 362 putative oxidoreductase; Provisional 80.6
PRK15408 336 autoinducer 2-binding protein lsrB; Provisional 80.4
PRK15454 395 ethanol dehydrogenase EutG; Provisional 80.06
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information 
Probab=100.00  E-value=5.5e-60  Score=452.65  Aligned_cols=195  Identities=68%  Similarity=1.121  Sum_probs=191.0

Q ss_pred             eEEEeCCCChhhHhHHHHHHHHHHHHcCCEEEEEcCcchhhccCCCCeEECChhhhhhhhhhcCceecccCCCCccChhH
Q psy5987           2 TAQVNKKSSSTGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAG   81 (197)
Q Consensus         2 ~aIl~sGG~apG~Na~i~~~v~~~~~~g~~v~g~~~G~~GL~~~~~~~~~l~~~~v~~~~~~gGs~LgssR~~~~~~~~~   81 (197)
                      |||+||||||||||++|++++++++++|++||||++||+||++++.++.+++|++++.|.++|||+|||+|+++|++++.
T Consensus         6 IaIltSGGdapGmNaaIravvr~a~~~g~~V~gi~~Gy~GL~~g~~~i~~l~~~~V~~i~~~GGT~LGTsR~~~f~~~e~   85 (762)
T cd00764           6 IAVLTSGGDAQGMNAAVRAVVRMGIYVGAKVFFVYEGYEGLVKGGDYIKQAEWESVSNWLQEGGTIIGSARCKEFREREG   85 (762)
T ss_pred             EEEEccCCCchhHhHHHHHHHHHHHHCCCEEEEEecCHHHHhCCCCCceeCCHHHHHHHHhCCCCcccCCCCCcccCHHH
Confidence            79999999999999999999999999999999999999999998667999999999999999999999999999988889


Q ss_pred             HHHHHHHHHHhCCcEEEEecCCCcHHHHHHHHHHhHHHHHHHHhcCCCcHHHHhhcCCceEEEeeeecccCCCCCCCCCC
Q psy5987          82 RLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIG  161 (197)
Q Consensus        82 ~~~~~~~l~~~~I~~LiviGG~gs~~~a~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~vvgiPkTIDNDi~g~d~s~G  161 (197)
                      +++++++|++++||+||+||||||+++|++|+++|+++++||.++++|++++++++++++|||||||||||+++||+|||
T Consensus        86 ~~~a~~~L~~~~Id~LvvIGGdgSl~gA~~l~~e~~~l~~el~~~g~i~~~~~~~~~~l~vVGiPkTIDNDl~gTD~TiG  165 (762)
T cd00764          86 RLQAAYNLIQRGITNLCVIGGDGSLTGADLFRSEWPSLLEELVKDGKITEEEVAKYQHLNIVGMVGSIDNDFCGTDMTIG  165 (762)
T ss_pred             HHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHhhhHHHHHHHhcCcccHHHHhcCCCceEEEeccceeCCCCCCcCCCC
Confidence            99999999999999999999999999999999889999999999999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHhhccCCcEEEEEecCCCC
Q psy5987         162 TDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLK  196 (197)
Q Consensus       162 fdTA~~~~~~~i~~l~~~a~S~~rv~ivE~mGr~~  196 (197)
                      ||||+++++++|+++.+||.||+|+||||+|||++
T Consensus       166 fdTAl~~i~eaId~i~~tA~Sh~R~fVVEvMGR~~  200 (762)
T cd00764         166 TDSALHRICEVVDAITTTAQSHQRTFVLEVMGRHC  200 (762)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCEEEEEECCCCc
Confidence            99999999999999999999999999999999985

The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>TIGR02482 PFKA_ATP 6-phosphofructokinase Back     alignment and domain information
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [] Back     alignment and domain information
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PRK03202 6-phosphofructokinase; Provisional Back     alignment and domain information
>TIGR02483 PFK_mixed phosphofructokinase Back     alignment and domain information
>PRK14072 6-phosphofructokinase; Provisional Back     alignment and domain information
>PLN02884 6-phosphofructokinase Back     alignment and domain information
>PRK14071 6-phosphofructokinase; Provisional Back     alignment and domain information
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PLN02564 6-phosphofructokinase Back     alignment and domain information
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>PTZ00286 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PLN02251 pyrophosphate-dependent phosphofructokinase Back     alignment and domain information
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>KOG2440|consensus Back     alignment and domain information
>KOG2440|consensus Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed Back     alignment and domain information
>cd06321 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems Back     alignment and domain information
>PLN02929 NADH kinase Back     alignment and domain information
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd01537 PBP1_Repressors_Sugar_Binding_like Ligand-binding domain of the LacI-GalR family of transcription regulators and the sugar-binding domain of ABC-type transport systems Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase Back     alignment and domain information
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd08550 GlyDH-like Glycerol_dehydrogenase-like Back     alignment and domain information
>cd06299 PBP1_LacI_like_13 Ligand-binding domain of DNA-binding regulatory protein from Corynebacterium glutamicum which has a unique ability to produce significant amounts of L-glutamate directly from cheap sugar and ammonia Back     alignment and domain information
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors Back     alignment and domain information
>cd06284 PBP1_LacI_like_6 Ligand-binding domain of an uncharacterized transcription regulator from Actinobacillus succinogenes and its close homologs from other bacteria Back     alignment and domain information
>cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme Back     alignment and domain information
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation Back     alignment and domain information
>cd06298 PBP1_CcpA_like Ligand-binding domain of the catabolite control protein A (CcpA), which functions as the major transcriptional regulator of carbon catabolite repression/regulation Back     alignment and domain information
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like Back     alignment and domain information
>cd06283 PBP1_RegR_EndR_KdgR_like Ligand-binding domain of DNA transcription repressor RegR and other putative regulators such as KdgR and EndR Back     alignment and domain information
>PRK09423 gldA glycerol dehydrogenase; Provisional Back     alignment and domain information
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional Back     alignment and domain information
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like Back     alignment and domain information
>PRK11914 diacylglycerol kinase; Reviewed Back     alignment and domain information
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis Back     alignment and domain information
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1 Back     alignment and domain information
>COG0061 nadF NAD kinase [Coenzyme metabolism] Back     alignment and domain information
>PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>PRK00002 aroB 3-dehydroquinate synthase; Reviewed Back     alignment and domain information
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes Back     alignment and domain information
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH) Back     alignment and domain information
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS) Back     alignment and domain information
>TIGR01357 aroB 3-dehydroquinate synthase Back     alignment and domain information
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism Back     alignment and domain information
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics Back     alignment and domain information
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like Back     alignment and domain information
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD) Back     alignment and domain information
>cd01542 PBP1_TreR_like Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators Back     alignment and domain information
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators Back     alignment and domain information
>PRK10703 DNA-binding transcriptional repressor PurR; Provisional Back     alignment and domain information
>PLN02727 NAD kinase Back     alignment and domain information
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>COG0371 GldA Glycerol dehydrogenase and related enzymes [Energy production and conversion] Back     alignment and domain information
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT) Back     alignment and domain information
>PRK13054 lipid kinase; Reviewed Back     alignment and domain information
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>PRK10423 transcriptional repressor RbsR; Provisional Back     alignment and domain information
>cd07995 TPK Thiamine pyrophosphokinase Back     alignment and domain information
>cd08196 DHQS-like1 Dehydroquinate synthase (DHQS)-like Back     alignment and domain information
>PRK13951 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional Back     alignment and domain information
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase Back     alignment and domain information
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor Back     alignment and domain information
>PLN02834 3-dehydroquinate synthase Back     alignment and domain information
>cd06278 PBP1_LacI_like_2 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors Back     alignment and domain information
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD) Back     alignment and domain information
>PRK10586 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK15408 autoinducer 2-binding protein lsrB; Provisional Back     alignment and domain information
>PRK15454 ethanol dehydrogenase EutG; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query197
3o8l_A 762 Structure Of Phosphofructokinase From Rabbit Skelet 2e-72
3opy_A 989 Crystal Structure Of Pichia Pastoris Phosphofructok 1e-59
3o8o_A 787 Structure Of Phosphofructokinase From Saccharomyces 1e-55
3opy_B 941 Crystal Structure Of Pichia Pastoris Phosphofructok 5e-55
3o8o_B 766 Structure Of Phosphofructokinase From Saccharomyces 7e-52
3pfk_A 319 Phosphofructokinase. Structure And Control Length = 8e-34
6pfk_A 319 Phosphofructokinase, Inhibited T-State Length = 319 8e-34
4a3s_A 319 Crystal Structure Of Pfk From Bacillus Subtilis Len 1e-33
1mto_A 319 Crystal Structure Of A Phosphofructokinase Mutant F 2e-33
1pfk_A 320 Crystal Structure Of The Complex Of Phosphofructoki 9e-29
1zxx_A 319 The Crystal Structure Of Phosphofructokinase From L 3e-25
2hig_A 487 Crystal Structure Of Phosphofructokinase Apoenzyme 2e-08
>pdb|3O8L|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal Muscle Length = 762 Back     alignment and structure 
Iteration: 1

 Score =  268 bits (684), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 127/184 (69%), Positives = 150/184 (81%)
Query: 11  STGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGS 70
           + GMNAAVRA VR+GI+ G +VFF+ EGYQG+VDGGD+I EA W SVS ++  GGTVIGS
Sbjct: 27  AQGMNAAVRAVVRVGIFTGARVFFVHEGYQGLVDGGDHIREATWESVSMMLQLGGTVIGS 86
Query: 71  ARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSIT 130
           ARC DFRE+ GRL+AA NL+ RGITNL VIGGDGSLTGA+ FR EW +LL  L K G IT
Sbjct: 87  ARCKDFREREGRLRAAHNLVKRGITNLCVIGGDGSLTGADTFRSEWSDLLSDLQKAGKIT 146
Query: 131 KDQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIME 190
            ++  +  +L+I GLVGSIDNDFCGTDMTIGTDSALHRI E +DAI +TA SHQRTF++E
Sbjct: 147 AEEATRSSYLNIVGLVGSIDNDFCGTDMTIGTDSALHRITEIVDAITTTAQSHQRTFVLE 206
Query: 191 VMGR 194
           VMGR
Sbjct: 207 VMGR 210
>pdb|3OPY|A Chain A, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 989 Back     alignment and structure
>pdb|3O8O|A Chain A, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 787 Back     alignment and structure
>pdb|3OPY|B Chain B, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 941 Back     alignment and structure
>pdb|3O8O|B Chain B, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 766 Back     alignment and structure
>pdb|3PFK|A Chain A, Phosphofructokinase. Structure And Control Length = 319 Back     alignment and structure
>pdb|6PFK|A Chain A, Phosphofructokinase, Inhibited T-State Length = 319 Back     alignment and structure
>pdb|4A3S|A Chain A, Crystal Structure Of Pfk From Bacillus Subtilis Length = 319 Back     alignment and structure
>pdb|1MTO|A Chain A, Crystal Structure Of A Phosphofructokinase Mutant From Bacillus Stearothermophilus Bound With Fructose-6-Phosphate Length = 319 Back     alignment and structure
>pdb|1PFK|A Chain A, Crystal Structure Of The Complex Of Phosphofructokinase From Escherichia Coli With Its Reaction Products Length = 320 Back     alignment and structure
>pdb|1ZXX|A Chain A, The Crystal Structure Of Phosphofructokinase From Lactobacillus Delbrueckii Length = 319 Back     alignment and structure
>pdb|2HIG|A Chain A, Crystal Structure Of Phosphofructokinase Apoenzyme From Trypanosoma Brucei. Length = 487 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query197
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 1e-106
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 1e-58
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 1e-105
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 6e-57
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 1e-105
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 4e-56
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 1e-104
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 2e-56
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 1e-104
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 7e-58
1zxx_A 319 6-phosphofructokinase; allosteric regulation, lact 1e-83
4a3s_A 319 6-phosphofructokinase; transferase, glycolysis, de 8e-83
1pfk_A 320 Phosphofructokinase; transferase(phosphotransferas 8e-79
2f48_A 555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 3e-51
2hig_A 487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 3e-48
3hno_A 419 Pyrophosphate-dependent phosphofructokinase; struc 6e-34
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
 Score =  321 bits (826), Expect = e-106
 Identities = 98/183 (53%), Positives = 130/183 (71%), Gaps = 1/183 (0%)

Query: 13  GMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGG-DNIVEANWSSVSSIIHKGGTVIGSA 71
           GMN+ VRA VR  I+ GC+ F + EGY+G+V GG + I E +W  V     +GGT IG+A
Sbjct: 17  GMNSNVRAIVRSAIFKGCRAFVVMEGYEGLVRGGPEYIKEFHWEDVRGWSAEGGTNIGTA 76

Query: 72  RCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITK 131
           RC +F+++ GRL  A++LI+ G+  L+V GGDGSLTGA+LFR EWP L+++LLK   I+ 
Sbjct: 77  RCMEFKKREGRLLGAQHLIEAGVDALIVCGGDGSLTGADLFRSEWPSLIEELLKTNRISN 136

Query: 132 DQREKYCHLHIAGLVGSIDNDFCGTDMTIGTDSALHRIIEAIDAIVSTAYSHQRTFIMEV 191
           +Q E+  HL+I G VGSIDND   TD TIG  SAL RI +AID + +TA SH R F++EV
Sbjct: 137 EQYERMKHLNICGTVGSIDNDMSTTDATIGAYSALDRICKAIDYVEATANSHSRAFVVEV 196

Query: 192 MGR 194
           MGR
Sbjct: 197 MGR 199
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Length = 319 Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Length = 319 Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Length = 320 Back     alignment and structure
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Length = 555 Back     alignment and structure
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Length = 487 Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Length = 419 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query197
1pfk_A 320 Phosphofructokinase; transferase(phosphotransferas 100.0
1zxx_A 319 6-phosphofructokinase; allosteric regulation, lact 100.0
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 100.0
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 100.0
4a3s_A 319 6-phosphofructokinase; transferase, glycolysis, de 100.0
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
3hno_A 419 Pyrophosphate-dependent phosphofructokinase; struc 100.0
2hig_A 487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 100.0
2f48_A 555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 100.0
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 100.0
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 100.0
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
2an1_A 292 Putative kinase; structural genomics, PSI, protein 95.53
2i2c_A 272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 95.09
3l49_A 291 ABC sugar (ribose) transporter, periplasmic substr 94.54
1z0s_A 278 Probable inorganic polyphosphate/ATP-NAD kinase; A 91.92
3g1w_A 305 Sugar ABC transporter; sugar-binding protein, baci 91.92
3egc_A 291 Putative ribose operon repressor; structural genom 91.18
3rot_A 297 ABC sugar transporter, periplasmic sugar binding; 91.01
3e61_A 277 Putative transcriptional repressor of ribose OPER; 90.21
3e3m_A 355 Transcriptional regulator, LACI family; structural 90.09
3m9w_A 313 D-xylose-binding periplasmic protein; xylose bindi 89.66
3hcw_A 295 Maltose operon transcriptional repressor; RNA-bind 89.5
3o74_A 272 Fructose transport system repressor FRUR; dual tra 89.28
3ksm_A 276 ABC-type sugar transport system, periplasmic COMP; 88.91
3dbi_A 338 Sugar-binding transcriptional regulator, LACI FAM; 88.53
3k4h_A 292 Putative transcriptional regulator; structural gen 88.2
1u0t_A 307 Inorganic polyphosphate/ATP-NAD kinase; alpha-beta 88.16
1jq5_A 370 Glycerol dehydrogenase; oxidoreductase, NAD, glyce 88.16
3gbv_A 304 Putative LACI-family transcriptional regulator; NY 86.75
3gv0_A 288 Transcriptional regulator, LACI family; transcript 86.41
3kjx_A 344 Transcriptional regulator, LACI family; LACL famil 86.15
3qk7_A 294 Transcriptional regulators; structural genomics, N 85.81
1yt5_A 258 Inorganic polyphosphate/ATP-NAD kinase; domain 1: 85.67
3uhj_A 387 Probable glycerol dehydrogenase; structural genomi 85.52
3l8m_A212 Probable thiamine pyrophosphokinase; thiamin dipho 85.25
3afo_A 388 NADH kinase POS5; alpha/beta+BETA sandwich, ATP-bi 85.2
3huu_A 305 Transcription regulator like protein; PSI-II, NYSG 84.99
3uug_A 330 Multiple sugar-binding periplasmic receptor CHVE; 84.8
3kke_A 303 LACI family transcriptional regulator; structural 84.59
3o1i_D 304 Periplasmic protein TORT; ligand free, two compone 84.47
3iv7_A 364 Alcohol dehydrogenase IV; NP_602249.1, iron-contai 83.83
2rjo_A 332 Twin-arginine translocation pathway signal protei; 83.82
3k9c_A 289 Transcriptional regulator, LACI family protein; PS 83.42
3h5o_A 339 Transcriptional regulator GNTR; transcription regu 83.28
3clk_A290 Transcription regulator; 11017J, PSI-II, NYSGXRC, 83.26
3bil_A 348 Probable LACI-family transcriptional regulator; st 83.14
1rrm_A 386 Lactaldehyde reductase; structural genomics, dehyd 82.17
3jzd_A 358 Iron-containing alcohol dehydrogenase; YP_298327.1 82.11
3hl0_A 353 Maleylacetate reductase; structur genomics, PSI-2, 81.79
3hs3_A 277 Ribose operon repressor; PSI-II, NYSGXRC, periplas 81.03
3ox4_A 383 Alcohol dehydrogenase 2; iron, NAD, oxidoreductase 80.83
3tb6_A 298 Arabinose metabolism transcriptional repressor; tr 80.82
2qv7_A 337 Diacylglycerol kinase DGKB; alpha-beta domain 1, b 80.56
2bon_A 332 Lipid kinase; DAG kinase, transferase; 1.90A {Esch 80.44
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Back     alignment and structure
Probab=100.00  E-value=1.2e-60  Score=419.66  Aligned_cols=170  Identities=44%  Similarity=0.650  Sum_probs=165.8

Q ss_pred             eEEEeCCCChhhHhHHHHHHHHHHHHcCCEEEEEcCcchhhccCCCCeEECChhhhhhhhhhcCceecccCCCCccChhH
Q psy5987           2 TAQVNKKSSSTGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAG   81 (197)
Q Consensus         2 ~aIl~sGG~apG~Na~i~~~v~~~~~~g~~v~g~~~G~~GL~~~~~~~~~l~~~~v~~~~~~gGs~LgssR~~~~~~~~~   81 (197)
                      +||+||||||||||++|++++++++++|++||||++||+||+++  ++++|+|++++.|.++|||+|||+|++++.++++
T Consensus         5 i~IltsGGdapGmNaair~vv~~a~~~g~~v~Gi~~G~~GL~~~--~~~~l~~~~v~~i~~~GGt~LGssR~~~~~~~~~   82 (320)
T 1pfk_A            5 IGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYED--RMVQLDRYSVSDMINRGGTFLGSARFPEFRDENI   82 (320)
T ss_dssp             EEEEECSSCCTTHHHHHHHHHHHHHHTTCEEEEESTHHHHHHTT--CEEEECSGGGTTCTTCCSCTTCCCCCGGGGSHHH
T ss_pred             EEEEccCCCchhHHHHHHHHHHHHHHCCCEEEEEecChHHhcCC--CEEECCHHHHhhHHhCCCCeeccCCCCCCCCHHH
Confidence            89999999999999999999999999999999999999999999  9999999999999999999999999999988999


Q ss_pred             HHHHHHHHHHhCCcEEEEecCCCcHHHHHHHHHHhHHHHHHHHhcCCCcHHHHhhcCCceEEEeeeecccCCCCCCCCCC
Q psy5987          82 RLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIG  161 (197)
Q Consensus        82 ~~~~~~~l~~~~I~~LiviGG~gs~~~a~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~vvgiPkTIDNDi~g~d~s~G  161 (197)
                      +++++++|++++||+||+||||||+++|++|+|+                       +++|||||||||||+++||+|||
T Consensus        83 ~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~-----------------------~i~vvgiPkTIDNDl~~td~t~G  139 (320)
T 1pfk_A           83 RAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEM-----------------------GFPCIGLPGTIDNDIKGTDYTIG  139 (320)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHT-----------------------TCCEEEEEBCTTCCCTTCSCCBT
T ss_pred             HHHHHHHHHHcCCCEEEEECCCchHHHHHHHHhh-----------------------CCCEEEEeccccCCCCCCcCCCC
Confidence            9999999999999999999999999999999852                       79999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHhhccCCcEEEEEecCCCC
Q psy5987         162 TDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLK  196 (197)
Q Consensus       162 fdTA~~~~~~~i~~l~~~a~S~~rv~ivE~mGr~~  196 (197)
                      ||||+++++++|++++++|.||+||||||+|||++
T Consensus       140 fdTA~~~~~~aid~i~~ta~s~~rv~iVEvMGR~a  174 (320)
T 1pfk_A          140 FFTALSTVVEAIDRLRDTSSSHQRISVVEVMGRYC  174 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCEEEEEeCCcCH
Confidence            99999999999999999999999999999999986
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Back     alignment and structure
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Back     alignment and structure
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides} Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125} Back     alignment and structure
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis} Back     alignment and structure
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp} Back     alignment and structure
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp} Back     alignment and structure
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi} Back     alignment and structure
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A* Back     alignment and structure
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp} Back     alignment and structure
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A* Back     alignment and structure
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis} Back     alignment and structure
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12} Back     alignment and structure
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98} Back     alignment and structure
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A Back     alignment and structure
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A* Back     alignment and structure
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis} Back     alignment and structure
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str} Back     alignment and structure
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi} Back     alignment and structure
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis} Back     alignment and structure
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} Back     alignment and structure
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti} Back     alignment and structure
>3l8m_A Probable thiamine pyrophosphokinase; thiamin diphosphate biosynthetic process, ATP binding, structural genomics, PSI-2; 2.40A {Staphylococcus saprophyticus} Back     alignment and structure
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus} Back     alignment and structure
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A* Back     alignment and structure
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str} Back     alignment and structure
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C Back     alignment and structure
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} Back     alignment and structure
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans} Back     alignment and structure
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii} Back     alignment and structure
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum} Back     alignment and structure
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A* Back     alignment and structure
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha} Back     alignment and structure
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str} Back     alignment and structure
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus} Back     alignment and structure
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A* Back     alignment and structure
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis} Back     alignment and structure
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Back     alignment and structure
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 197
d2f48a1 550 c.89.1.1 (A:4-553) Pyrophosphate-dependent phospho 4e-41
d1pfka_ 320 c.89.1.1 (A:) ATP-dependent phosphofructokinase {E 3e-38
d4pfka_ 319 c.89.1.1 (A:) ATP-dependent phosphofructokinase {B 1e-36
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Length = 550 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: Pyrophosphate-dependent phosphofructokinase
species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

 Score =  144 bits (363), Expect = 4e-41
 Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 24/187 (12%)

Query: 13  GMNAAVRACVR--MGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGS 70
           G +  +              K+F  K G  G+++   + +E   S ++S  + GG  I S
Sbjct: 83  GGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLEN--DKIELTESLINSYRNTGGFDIVS 140

Query: 71  ARCSDFREKAGRLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSIT 130
           +  +    +    KA     +  +  +++IGGD S T A +  + +              
Sbjct: 141 SGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYF-------------- 186

Query: 131 KDQREKYCHLHIAGLVGSIDNDFCG--TDMTIGTDSALHRIIEAIDAIVSTA-YSHQRTF 187
              ++   ++ + G+  +ID D      +++ G DSA     E I  +   A  + +   
Sbjct: 187 ---KKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTKKYWH 243

Query: 188 IMEVMGR 194
            +++MGR
Sbjct: 244 FVKLMGR 250
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Length = 320 Back     information, alignment and structure
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Length = 319 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query197
d1pfka_ 320 ATP-dependent phosphofructokinase {Escherichia col 100.0
d4pfka_ 319 ATP-dependent phosphofructokinase {Bacillus stearo 100.0
d2f48a1 550 Pyrophosphate-dependent phosphofructokinase {Lyme 100.0
d1jyea_ 271 Lac-repressor (lacR) core (C-terminal domain) {Esc 93.57
d1byka_255 Trehalose repressor, C-terminal domain {Escherichi 92.53
d1u0ta_ 302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 92.08
d1jq5a_ 366 Glycerol dehydrogenase {Bacillus stearothermophilu 91.55
d1dbqa_ 282 Purine repressor (PurR), C-terminal domain {Escher 89.49
d1z0sa1 249 Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa 89.43
d2qv7a1 312 Diacylglycerol kinase DgkB {Staphylococcus aureus 89.05
d1rrma_ 385 Lactaldehyde reductase FucO {Escherichia coli [Tax 85.04
d2nzug1 275 Glucose-resistance amylase regulator CcpA, C-termi 84.82
d2bona1 295 Lipid kinase YegS {Escherichia coli [TaxId: 562]} 82.62
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: ATP-dependent phosphofructokinase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.9e-58  Score=402.56  Aligned_cols=170  Identities=44%  Similarity=0.650  Sum_probs=165.5

Q ss_pred             eEEEeCCCChhhHhHHHHHHHHHHHHcCCEEEEEcCcchhhccCCCCeEECChhhhhhhhhhcCceecccCCCCccChhH
Q psy5987           2 TAQVNKKSSSTGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHKGGTVIGSARCSDFREKAG   81 (197)
Q Consensus         2 ~aIl~sGG~apG~Na~i~~~v~~~~~~g~~v~g~~~G~~GL~~~~~~~~~l~~~~v~~~~~~gGs~LgssR~~~~~~~~~   81 (197)
                      ||||||||||||||++|+++++++.++|++|||+++||+||+++  ++++|+|++++.|.++|||+|||+|++++++++.
T Consensus         5 IgIltsGG~~pg~Na~i~~~v~~~~~~~~~v~g~~~G~~Gl~~~--~~~~l~~~~v~~~~~~gGs~lgt~R~~~~~~~~~   82 (320)
T d1pfka_           5 IGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYED--RMVQLDRYSVSDMINRGGTFLGSARFPEFRDENI   82 (320)
T ss_dssp             EEEEECSSCCTTHHHHHHHHHHHHHHTTCEEEEESTHHHHHHTT--CEEEECSGGGTTCTTCCSCTTCCCCCGGGGSHHH
T ss_pred             EEEEccCCCchHHHHHHHHHHHHHHHCCCEEEEEeccHHHHcCC--CeEeCCHHHHHHHHhcCCCcccccCCCCCcchhh
Confidence            89999999999999999999999999999999999999999999  9999999999999999999999999999989999


Q ss_pred             HHHHHHHHHHhCCcEEEEecCCCcHHHHHHHHHHhHHHHHHHHhcCCCcHHHHhhcCCceEEEeeeecccCCCCCCCCCC
Q psy5987          82 RLKAAKNLIDRGITNLVVIGGDGSLTGANLFRQEWPELLDQLLKDGSITKDQREKYCHLHIAGLVGSIDNDFCGTDMTIG  161 (197)
Q Consensus        82 ~~~~~~~l~~~~I~~LiviGG~gs~~~a~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~vvgiPkTIDNDi~g~d~s~G  161 (197)
                      +++++++|++++||+||+||||||+++|++|+|+                       +++||+||||||||++++|+|||
T Consensus        83 ~~~~~~~l~~~~I~~li~iGG~~s~~~a~~l~~~-----------------------~~~vigiPkTIDNDl~~td~s~G  139 (320)
T d1pfka_          83 RAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEM-----------------------GFPCIGLPGTIDNDIKGTDYTIG  139 (320)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHT-----------------------TCCEEEEEBCTTCCCTTCSCCBT
T ss_pred             hhhHHHHHHHcCCCEEEEeCCchHHHHHHHHHhc-----------------------ccceeeeeeeecCCCCCcCCCCc
Confidence            9999999999999999999999999999999863                       68999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHhhccCCcEEEEEecCCCC
Q psy5987         162 TDSALHRIIEAIDAIVSTAYSHQRTFIMEVMGRLK  196 (197)
Q Consensus       162 fdTA~~~~~~~i~~l~~~a~S~~rv~ivE~mGr~~  196 (197)
                      ||||++++++++++++++|+||+||||||+|||++
T Consensus       140 f~TA~~~~~~~i~~l~~~a~s~~rv~ivEvMGR~~  174 (320)
T d1pfka_         140 FFTALSTVVEAIDRLRDTSSSHQRISVVEVMGRYC  174 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCTTC
T ss_pred             hHHHHHHHHHHHHHHhhhccCCCcEEEEEeeccch
Confidence            99999999999999999999999999999999986
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1byka_ c.93.1.1 (A:) Trehalose repressor, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure