Psyllid ID: psy6014


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------7
MGNSTSFGRHLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTSCVHSSG
ccccccHHHHHHcccccccccccccccEEEEEcccccccEEEEEEccccccccccccHHHHcccccccc
cccccccccEEEEccEcccccccccccEEEEEcccccccEEEEEEEcccccccccccHHHHHccccccc
mgnstsfgrhlvsdldlqrpcscqrkkkrcycfrpnrhevWLFSRystgwkcglhadwteltscvhssg
mgnstsfgrhlvsdldlqrpcscqrkkkrcycfrpnRHEVWLFSRYSTGWKCGLHADWTELTSCVHSSG
MGNSTSFGRHLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTSCVHSSG
**********LVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTSCV****
**NSTSFGRHLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTSCVH***
*********HLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTSCVHSSG
*****SFGRHLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTSCVHS**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGNSTSFGRHLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTSCVHSSG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query69 2.2.26 [Sep-21-2011]
Q76KB2 408 Heparan-sulfate 6-O-sulfo yes N/A 0.884 0.149 0.672 6e-21
Q56UJ5 413 Heparan-sulfate 6-O-sulfo yes N/A 0.884 0.147 0.672 7e-21
A0MGZ5 407 Heparan-sulfate 6-O-sulfo yes N/A 0.884 0.149 0.672 7e-21
O60243 411 Heparan-sulfate 6-O-sulfo yes N/A 0.884 0.148 0.672 9e-21
Q9QYK5 411 Heparan-sulfate 6-O-sulfo yes N/A 0.884 0.148 0.672 9e-21
Q91ZB4 401 Heparan-sulfate 6-O-sulfo yes N/A 0.884 0.152 0.672 9e-21
Q800H9 468 Heparan-sulfate 6-O-sulfo no N/A 0.913 0.134 0.634 1e-20
Q96MM7 605 Heparan-sulfate 6-O-sulfo no N/A 0.913 0.104 0.650 2e-20
Q80UW0 612 Heparan-sulfate 6-O-sulfo no N/A 0.913 0.102 0.634 3e-20
Q8IZP7 471 Heparan-sulfate 6-O-sulfo no N/A 0.884 0.129 0.655 4e-20
>sp|Q76KB2|H6ST1_CHICK Heparan-sulfate 6-O-sulfotransferase 1 OS=Gallus gallus GN=HS6ST1 PE=2 SV=4 Back     alignment and function desciption
 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 51/61 (83%)

Query: 5   TSFGRHLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTSC 64
           T+FGRHLV ++ L+ PC C+  +K+C C+RPNR E WLFSR+STGW CGLHADWTELT+C
Sbjct: 97  TTFGRHLVQNVRLEVPCDCRPGQKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNC 156

Query: 65  V 65
           V
Sbjct: 157 V 157




6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
Gallus gallus (taxid: 9031)
EC: 2EC: .EC: 8EC: .EC: 2EC: .EC: -
>sp|Q56UJ5|H6S1A_DANRE Heparan-sulfate 6-O-sulfotransferase 1-A OS=Danio rerio GN=hs6st1a PE=2 SV=2 Back     alignment and function description
>sp|A0MGZ5|H6S1B_DANRE Heparan-sulfate 6-O-sulfotransferase 1-B OS=Danio rerio GN=hs6st1b PE=2 SV=3 Back     alignment and function description
>sp|O60243|H6ST1_HUMAN Heparan-sulfate 6-O-sulfotransferase 1 OS=Homo sapiens GN=HS6ST1 PE=2 SV=5 Back     alignment and function description
>sp|Q9QYK5|H6ST1_MOUSE Heparan-sulfate 6-O-sulfotransferase 1 OS=Mus musculus GN=Hs6st1 PE=1 SV=4 Back     alignment and function description
>sp|Q91ZB4|H6ST1_CRIGR Heparan-sulfate 6-O-sulfotransferase 1 OS=Cricetulus griseus GN=HS6ST1 PE=1 SV=3 Back     alignment and function description
>sp|Q800H9|H6ST2_DANRE Heparan-sulfate 6-O-sulfotransferase 2 OS=Danio rerio GN=hs6st2 PE=2 SV=2 Back     alignment and function description
>sp|Q96MM7|H6ST2_HUMAN Heparan-sulfate 6-O-sulfotransferase 2 OS=Homo sapiens GN=HS6ST2 PE=2 SV=2 Back     alignment and function description
>sp|Q80UW0|H6ST2_MOUSE Heparan-sulfate 6-O-sulfotransferase 2 OS=Mus musculus GN=Hs6st2 PE=2 SV=3 Back     alignment and function description
>sp|Q8IZP7|H6ST3_HUMAN Heparan-sulfate 6-O-sulfotransferase 3 OS=Homo sapiens GN=HS6ST3 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query69
195112068 456 GI10319 [Drosophila mojavensis] gi|19391 0.884 0.133 0.868 3e-28
195395822 380 GJ10173 [Drosophila virilis] gi|19414324 0.884 0.160 0.868 8e-28
14090280 432 heparan sulfate 6-O-sulfotransferase [Dr 0.884 0.141 0.868 8e-28
347965915 522 AGAP001444-PA [Anopheles gambiae str. PE 0.884 0.116 0.868 2e-26
195054479 397 GH23267 [Drosophila grimshawi] gi|193896 0.884 0.153 0.868 2e-26
24648308 462 heparan sulfate 6-O-sulfotransferase, is 0.884 0.132 0.868 2e-26
195569556 462 mira [Drosophila simulans] gi|194198702| 0.884 0.132 0.868 2e-26
195068415 371 GH19610 [Drosophila grimshawi] gi|193891 0.884 0.164 0.868 2e-26
194899857 454 GG15697 [Drosophila erecta] gi|190651177 0.884 0.134 0.868 2e-26
195450088 467 GK22800 [Drosophila willistoni] gi|19416 0.884 0.130 0.868 2e-26
>gi|195112068|ref|XP_002000598.1| GI10319 [Drosophila mojavensis] gi|193917192|gb|EDW16059.1| GI10319 [Drosophila mojavensis] Back     alignment and taxonomy information
 Score =  129 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/61 (86%), Positives = 58/61 (95%)

Query: 5   TSFGRHLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTSC 64
           TSFGRHLV DLDL+RPC CQR++KRCYCFRP+R+E WLFSRYSTGWKCGLHADWTELTSC
Sbjct: 154 TSFGRHLVRDLDLKRPCECQRQRKRCYCFRPHRNENWLFSRYSTGWKCGLHADWTELTSC 213

Query: 65  V 65
           V
Sbjct: 214 V 214




Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195395822|ref|XP_002056533.1| GJ10173 [Drosophila virilis] gi|194143242|gb|EDW59645.1| GJ10173 [Drosophila virilis] Back     alignment and taxonomy information
>gi|14090280|dbj|BAB55594.1| heparan sulfate 6-O-sulfotransferase [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|347965915|ref|XP_321686.5| AGAP001444-PA [Anopheles gambiae str. PEST] gi|333470296|gb|EAA01731.5| AGAP001444-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|195054479|ref|XP_001994152.1| GH23267 [Drosophila grimshawi] gi|193896022|gb|EDV94888.1| GH23267 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|24648308|ref|NP_524409.2| heparan sulfate 6-O-sulfotransferase, isoform A [Drosophila melanogaster] gi|442620010|ref|NP_001262750.1| heparan sulfate 6-O-sulfotransferase, isoform B [Drosophila melanogaster] gi|15292115|gb|AAK93326.1| LD39166p [Drosophila melanogaster] gi|23171760|gb|AAF55724.2| heparan sulfate 6-O-sulfotransferase, isoform A [Drosophila melanogaster] gi|220946154|gb|ACL85620.1| Hs6st-PA [synthetic construct] gi|220955936|gb|ACL90511.1| Hs6st-PA [synthetic construct] gi|440217648|gb|AGB96130.1| heparan sulfate 6-O-sulfotransferase, isoform B [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|195569556|ref|XP_002102775.1| mira [Drosophila simulans] gi|194198702|gb|EDX12278.1| mira [Drosophila simulans] Back     alignment and taxonomy information
>gi|195068415|ref|XP_001996923.1| GH19610 [Drosophila grimshawi] gi|193891978|gb|EDV90844.1| GH19610 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|194899857|ref|XP_001979474.1| GG15697 [Drosophila erecta] gi|190651177|gb|EDV48432.1| GG15697 [Drosophila erecta] Back     alignment and taxonomy information
>gi|195450088|ref|XP_002072359.1| GK22800 [Drosophila willistoni] gi|194168444|gb|EDW83345.1| GK22800 [Drosophila willistoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query69
FB|FBgn0038755 462 Hs6st "Heparan sulfate 6-O-sul 0.884 0.132 0.868 1.2e-28
UNIPROTKB|F1NY39 382 HS6ST1 "Heparan-sulfate 6-O-su 0.884 0.159 0.672 2.6e-22
UNIPROTKB|I3LAM6 384 HS6ST1 "Uncharacterized protei 0.884 0.158 0.672 2.6e-22
ZFIN|ZDB-GENE-070103-2 407 hs6st1b "heparan sulfate 6-O-s 0.884 0.149 0.672 4.4e-22
UNIPROTKB|Q76KB2 408 HS6ST1 "Heparan-sulfate 6-O-su 0.884 0.149 0.672 4.4e-22
UNIPROTKB|E1BNW3 411 HS6ST1 "Uncharacterized protei 0.884 0.148 0.672 4.7e-22
UNIPROTKB|O60243 411 HS6ST1 "Heparan-sulfate 6-O-su 0.884 0.148 0.672 4.7e-22
MGI|MGI:1354958 411 Hs6st1 "heparan sulfate 6-O-su 0.884 0.148 0.672 4.7e-22
RGD|1309218 411 Hs6st1 "heparan sulfate 6-O-su 0.884 0.148 0.672 4.7e-22
ZFIN|ZDB-GENE-050524-1 413 hs6st1a "heparan sulfate 6-O-s 0.884 0.147 0.672 6.4e-22
FB|FBgn0038755 Hs6st "Heparan sulfate 6-O-sulfotransferase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 53/61 (86%), Positives = 58/61 (95%)

Query:     5 TSFGRHLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTSC 64
             TSFGRHLV DLDL+RPC CQR++KRCYCFRP+R+E WLFSRYSTGWKCGLHADWTELTSC
Sbjct:   160 TSFGRHLVRDLDLKRPCECQRQRKRCYCFRPHRNENWLFSRYSTGWKCGLHADWTELTSC 219

Query:    65 V 65
             V
Sbjct:   220 V 220




GO:0017095 "heparan sulfate 6-O-sulfotransferase activity" evidence=NAS
GO:0007428 "primary branching, open tracheal system" evidence=TAS
GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=TAS
GO:0015012 "heparan sulfate proteoglycan biosynthetic process" evidence=TAS
GO:0016021 "integral to membrane" evidence=IEA
GO:0008146 "sulfotransferase activity" evidence=IEA
GO:0007424 "open tracheal system development" evidence=IGI;IMP
GO:0008587 "imaginal disc-derived wing margin morphogenesis" evidence=IMP
GO:0090097 "regulation of decapentaplegic signaling pathway" evidence=IMP
GO:0022416 "chaeta development" evidence=IMP
GO:0060828 "regulation of canonical Wnt receptor signaling pathway" evidence=IMP
GO:0045570 "regulation of imaginal disc growth" evidence=IMP
UNIPROTKB|F1NY39 HS6ST1 "Heparan-sulfate 6-O-sulfotransferase 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|I3LAM6 HS6ST1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070103-2 hs6st1b "heparan sulfate 6-O-sulfotransferase 1b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q76KB2 HS6ST1 "Heparan-sulfate 6-O-sulfotransferase 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BNW3 HS6ST1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O60243 HS6ST1 "Heparan-sulfate 6-O-sulfotransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1354958 Hs6st1 "heparan sulfate 6-O-sulfotransferase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1309218 Hs6st1 "heparan sulfate 6-O-sulfotransferase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050524-1 hs6st1a "heparan sulfate 6-O-sulfotransferase 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O60243H6ST1_HUMAN2, ., 8, ., 2, ., -0.67210.88400.1484yesN/A
Q91ZB4H6ST1_CRIGR2, ., 8, ., 2, ., -0.67210.88400.1521yesN/A
Q56UJ5H6S1A_DANRE2, ., 8, ., 2, ., -0.67210.88400.1476yesN/A
A0MGZ5H6S1B_DANRE2, ., 8, ., 2, ., -0.67210.88400.1498yesN/A
Q76KB2H6ST1_CHICK2, ., 8, ., 2, ., -0.67210.88400.1495yesN/A
Q9QYK5H6ST1_MOUSE2, ., 8, ., 2, ., -0.67210.88400.1484yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query69
pfam03567 238 pfam03567, Sulfotransfer_2, Sulfotransferase famil 6e-07
>gnl|CDD|217617 pfam03567, Sulfotransfer_2, Sulfotransferase family Back     alignment and domain information
 Score = 43.9 bits (104), Expect = 6e-07
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 10/62 (16%)

Query: 4  STSFGRHLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTELTS 63
          STS+ R L     L         + +      + ++ W  S+ S GW  G   D +ELTS
Sbjct: 16 STSWKRILC---VLY-------GENKFLADNRSINDTWAHSKRSCGWSHGSFRDLSELTS 65

Query: 64 CV 65
          C 
Sbjct: 66 CE 67


This family includes a variety of sulfotransferase enzymes. Chondroitin 6-sulfotransferase catalyzes the transfer of sulfate to position 6 of the N-acetylgalactosamine residue of chondroitin. This family also includes Heparan sulfate 2-O-sulfotransferase (HS2ST) and Heparan sulfate 6-sulfotransferase (HS6ST). Heparan sulfate (HS) is a co-receptor for a number of growth factors, morphogens, and adhesion proteins. HS biosynthetic modifications may determine the strength and outcome of HS-ligand interactions. Mice that lack HS2ST undergo developmental failure only after midgestation,the most dramatic effect being the complete failure of kidney development. Heparan sulphate 6- O -sulfotransferase (HS6ST) catalyzes the transfer of sulphate from adenosine 3'-phosphate, 5'-phosphosulphate to the 6th position of the N -sulphoglucosamine residue in heparan sulphate. Length = 238

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 69
KOG3955|consensus 361 99.88
KOG3955|consensus 361 97.58
>KOG3955|consensus Back     alignment and domain information
Probab=99.88  E-value=2.7e-24  Score=166.64  Aligned_cols=65  Identities=54%  Similarity=1.217  Sum_probs=61.7

Q ss_pred             CccceecceecccCCCCCCeecccCCeeeeecCCCCCceeEEEecccceeecccccchhh--ccccc
Q psy6014           2 GNSTSFGRHLVSDLDLQRPCSCQRKKKRCYCFRPNRHEVWLFSRYSTGWKCGLHADWTEL--TSCVH   66 (69)
Q Consensus         2 tgGTtfgrhLV~~l~l~~pC~C~~~~krc~C~RP~~~~~WLFSRySTGW~CGLHADwTEL--t~CV~   66 (69)
                      |+||||+|+|||+..+++||.|+..+|+|.|.|+.+++|||||||||||.|||||||||+  ..|++
T Consensus        78 ~~~tt~~~~~~r~y~~~~p~~~~~~~~~~~~~~~~~~~twlfsr~s~g~~~glhad~te~vv~~~~~  144 (361)
T KOG3955|consen   78 TGGTTFGRHLVRNIQLEQPCECRVGQKKCTCHRPGKRETWLFSRFSTGWSCGLHADWTESVVDGKRD  144 (361)
T ss_pred             cCCCCCcchhhhhhhhcchhhhhhcccccCCCccceeeeeeccccccccceeeecchhhhhccceec
Confidence            799999999999999999999999999999999999999999999999999999999998  35554



>KOG3955|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00