Psyllid ID: psy6104

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MSTDCCVLCKPTESILISTATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILVPNV
Secondary Structure (PSIPRED)
cccccccccccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHcccccccccHHHHHHHHHcccccccccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccEEEEcccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHccccccccccHHHHHHHHHHHHHccccccEEEEEEc
Coil and Loop (DISEMBL)
mstdccvlckptesilisTATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICcrkepelspndpkqKEQKAIRQGKQEFEGTFMTEAKDWAGelisgqtttgrilvpnv
Flexible Loop (DISEMBL)
mstdccvlckptesilistaTSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKepelspndpkqkeQKAIRQGKQEFEGTFMTEAKDWAgelisgqtttgrilvpnv
Low Complexity Region (SEG)
MSTDCCVLCKPTESILISTATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILVPNV
Disordered region (IsUnstruct)
***DCCVLCKPTESILISTATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCR*********************************KDWAGELIS*************
Disordered Region (DISOPRED)
**TDC**LCKPTESIL**********CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFIC******************************FMTEAKDWAGELISGQTTTGRILVPNV
Disordered Region (DISEMBL)
MSTDCCVLCKPTESILISTATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPE****************GKQEFEGTFMTEAKDWAGELISGQTTTGRILVPNV
Disordered Region (DISPRO)
*STDCCVLCKPTESILISTATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEP*********************FEGTFMTEAKDWAGELISGQTTTGRILVPNV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSTDCCVLCKPTESILISTATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILVPNV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	118	2.2.26 [Sep-21-2011]
Q03720	1200	Calcium-activated potassi	yes	N/A	0.779	0.076	0.827	2e-42
Q95V25	1140	Calcium-activated potassi	yes	N/A	0.694	0.071	0.441	1e-18
Q62976	1209	Calcium-activated potassi	yes	N/A	0.669	0.065	0.390	5e-13
Q08460	1209	Calcium-activated potassi	yes	N/A	0.669	0.065	0.390	5e-13
Q9BG98	1179	Calcium-activated potassi	yes	N/A	0.669	0.067	0.390	6e-13
Q28265	1159	Calcium-activated potassi	yes	N/A	0.669	0.068	0.390	6e-13
O18867	1151	Calcium-activated potassi	yes	N/A	0.669	0.068	0.390	6e-13
Q28204	1166	Calcium-activated potassi	yes	N/A	0.669	0.067	0.390	7e-13
O18866	1152	Calcium-activated potassi	yes	N/A	0.669	0.068	0.390	8e-13
Q12791	1236	Calcium-activated potassi	no	N/A	0.669	0.063	0.390	8e-13

>sp|Q03720|SLO_DROME Calcium-activated potassium channel slowpoke OS=Drosophila melanogaster GN=slo PE=1 SV=3

 Score =  170 bits (431), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/93 (82%), Positives = 84/93 (90%), Gaps = 1/93 (1%)

Query: 23  DIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPNDPKQKEQKAIR 82
           D D CL+ RK+WCFLLSSIFTF+ GL++VLLWR FAF+CCRKEP+L PNDPKQKEQKA R
Sbjct: 39  DADDCLKVRKYWCFLLSSIFTFLAGLLVVLLWRAFAFVCCRKEPDLGPNDPKQKEQKASR 98

Query: 83  QGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
             KQEFEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 99  N-KQEFEGTFMTEAKDWAGELISGQTTTGRILV 130

Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Kinetics are determined by alternative splicing, phosphorylation status and its combination interaction with Slob and 14-3-3-zeta. While the interaction with Slob1 alone increases its activity, its interaction with both Slob1 and 14-3-3-zeta decreases its activity.
Drosophila melanogaster (taxid: 7227)

>sp|Q95V25|SLO1_CAEEL Calcium-activated potassium channel slo-1 OS=Caenorhabditis elegans GN=slo-1 PE=1 SV=2

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 29/111 (26%)

Query: 27  CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICC-RKEPEL----------------- 68
           CL+ERK+WCFLLSSI TF   +++V++WR+   +CC R+E E                  
Sbjct: 39  CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98

Query: 69  ----SPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
               S  DP  K+Q+    G       +MTEAKDWAGELISGQ+ TGR LV
Sbjct: 99  KHAPSETDPFLKQQEEKHLG-------WMTEAKDWAGELISGQSLTGRFLV 142

Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Plays a central role in synapses by regulating neurotransmitter release.

Caenorhabditis elegans (taxid: 6239)

>sp|Q62976|KCMA1_RAT Calcium-activated potassium channel subunit alpha-1 OS=Rattus norvegicus GN=Kcnma1 PE=1 SV=3

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)

Query: 30  ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
           +R WW FL SS+ TF  GL I+LLWR   +   +CC           K KE + I  G  
Sbjct: 85  QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGSS 137

Query: 87  EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
           + +GT                +MT  KDWAG +IS QT TGR+LV
Sbjct: 138 QADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 182

Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). It is also activated by the concentration of cytosolic Mg(2+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Plays a key role in controlling excitability in a number of systems, such as regulation of the contraction of smooth muscle, the tuning of hair cells in the cochlea, regulation of transmitter release, and innate immunity. In smooth muscles, its activation by high level of Ca(2+), caused by ryanodine receptors in the sarcoplasmic reticulum, regulates the membrane potential. In cochlea cells, its number and kinetic properties partly determine the characteristic frequency of each hair cell and thereby helps to establish a tonotopic map. Kinetics of KCNMA1 channels are determined by alternative splicing, phosphorylation status and its combination with modulating beta subunits. Highly sensitive to both iberiotoxin (IbTx) and charybdotoxin (CTX).

Rattus norvegicus (taxid: 10116)

>sp|Q08460|KCMA1_MOUSE Calcium-activated potassium channel subunit alpha-1 OS=Mus musculus GN=Kcnma1 PE=1 SV=2

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)

Query: 30  ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
           +R WW FL SS+ TF  GL I+LLWR   +   +CC           K KE + I  G  
Sbjct: 84  QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGSS 136

Query: 87  EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
           + +GT                +MT  KDWAG +IS QT TGR+LV
Sbjct: 137 QADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 181

Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). It is also activated by the concentration of cytosolic Mg(2+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Plays a key role in controlling excitability in a number of systems, such as regulation of the contraction of smooth muscle, the tuning of hair cells in the cochlea, regulation of transmitter release, and innate immunity. In smooth muscles, its activation by high level of Ca(2+), caused by ryanodine receptors in the sarcoplasmic reticulum, regulates the membrane potential. In cochlea cells, its number and kinetic properties partly determine the characteristic frequency of each hair cell and thereby helps to establish a tonotopic map. Kinetics of KCNMA1 channels are determined by alternative splicing, phosphorylation status and its combination with modulating beta subunits. Highly sensitive to both iberiotoxin (IbTx) and charybdotoxin (CTX).

Mus musculus (taxid: 10090)

>sp|Q9BG98|KCMA1_RABIT Calcium-activated potassium channel subunit alpha-1 OS=Oryctolagus cuniculus GN=KCNMA1 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)

Query: 30  ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
           +R WW FL SS+ TF  GL I+LLWR   +   +CC           K KE + I  G  
Sbjct: 85  QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKAKEAQKINNGSS 137

Query: 87  EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
           + +GT                +MT  KDWAG +IS QT TGR+LV
Sbjct: 138 QADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 182

Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). It is also activated by the concentration of cytosolic Mg(2+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Plays a key role in controlling excitability in a number of systems, such as regulation of the contraction of smooth muscle, the tuning of hair cells in the cochlea, regulation of transmitter release, and innate immunity. In smooth muscles, its activation by high level of Ca(2+), caused by ryanodine receptors in the sarcoplasmic reticulum, regulates the membrane potential. In cochlea cells, its number and kinetic properties partly determine the characteristic frequency of each hair cell and thereby helps to establish a tonotopic map. Kinetics of KCNMA1 channels are determined by alternative splicing, phosphorylation status and its combination with modulating beta subunits. Highly sensitive to both iberiotoxin (IbTx) and charybdotoxin (CTX).

Oryctolagus cuniculus (taxid: 9986)

>sp|Q28265|KCMA1_CANFA Calcium-activated potassium channel subunit alpha-1 (Fragment) OS=Canis familiaris GN=KCNMA1 PE=2 SV=2

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)

Query: 30  ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
           +R WW FL SS+ TF  GL I+LLWR   +   +CC           K KE + I  G  
Sbjct: 22  QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGDKTKEAQKINNGSS 74

Query: 87  EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
           + +GT                +MT  KDWAG +IS QT TGR+LV
Sbjct: 75  QADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 119

Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). It is also activated by the concentration of cytosolic Mg(2+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Plays a key role in controlling excitability in a number of systems, such as regulation of the contraction of smooth muscle, the tuning of hair cells in the cochlea, regulation of transmitter release, and innate immunity. In smooth muscles, its activation by high level of Ca(2+), caused by ryanodine receptors in the sarcoplasmic reticulum, regulates the membrane potential. In cochlea cells, its number and kinetic properties partly determine the characteristic frequency of each hair cell and thereby helps to establish a tonotopic map. Kinetics of KCNMA1 channels are determined by alternative splicing, phosphorylation status and its combination with modulating beta subunits. Highly sensitive to both iberiotoxin (IbTx) and charybdotoxin (CTX).

Canis familiaris (taxid: 9615)

>sp|O18867|KCMA1_MACMU Calcium-activated potassium channel subunit alpha-1 (Fragment) OS=Macaca mulatta GN=KCNMA1 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)

Query: 30  ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
           +R WW FL SS+ TF  GL I+LLWR   +   +CC           K KE + I  G  
Sbjct: 57  QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGSS 109

Query: 87  EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
           + +GT                +MT  KDWAG +IS QT TGR+LV
Sbjct: 110 QADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 154

Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). It is also activated by the concentration of cytosolic Mg(2+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Plays a key role in controlling excitability in a number of systems, such as regulation of the contraction of smooth muscle, the tuning of hair cells in the cochlea, regulation of transmitter release, and innate immunity. In smooth muscles, its activation by high level of Ca(2+), caused by ryanodine receptors in the sarcoplasmic reticulum, regulates the membrane potential. In cochlea cells, its number and kinetic properties partly determine the characteristic frequency of each hair cell and thereby helps to establish a tonotopic map. Kinetics of KCNMA1 channels are determined by alternative splicing, phosphorylation status and its combination with modulating beta subunits. Highly sensitive to both iberiotoxin (IbTx) and charybdotoxin (CTX).

Macaca mulatta (taxid: 9544)

>sp|Q28204|KCMA1_BOVIN Calcium-activated potassium channel subunit alpha-1 OS=Bos taurus GN=KCNMA1 PE=1 SV=2

 Score = 72.8 bits (177), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)

Query: 30  ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
           +R WW FL SS+ TF  GL I+LLWR   +   +CC           K KE + I  G  
Sbjct: 72  QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGSS 124

Query: 87  EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
           + +GT                +MT  KDWAG +IS QT TGR+LV
Sbjct: 125 QADGTLKPVDEKEETVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 169

Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). It is also activated by concentration of cytosolic Mg(2+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Plays a key role in controlling excitability in a number of systems, such as regulation of the contraction of smooth muscle, the tuning of hair cells in the cochlea, regulation of transmitter release, and innate immunity. In smooth muscles, its activation by high level of Ca(2+), caused by ryanodine receptors in the sarcoplasmic reticulum, regulates the membrane potential. In cochlea cells, its number and kinetic properties partly determine the characteristic frequency of each hair cell and thereby helps to establish a tonotopic map. Kinetics of KCNMA1 channels are determined by alternative splicing, phosphorylation status and its combination with modulating beta subunits. Highly sensitive to both iberiotoxin (IbTx) and charybdotoxin (CTX).

Bos taurus (taxid: 9913)

>sp|O18866|KCMA1_PIG Calcium-activated potassium channel subunit alpha-1 (Fragment) OS=Sus scrofa GN=KCNMA1 PE=2 SV=2

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)

Query: 30  ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
           +R WW FL SS+ TF  GL I+LLWR   +   +CC           K KE + I  G  
Sbjct: 58  QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGAS 110

Query: 87  EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
           + +GT                +MT  KDWAG +IS QT TGR+LV
Sbjct: 111 QADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 155

Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). It is also activated by the concentration of cytosolic Mg(2+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Plays a key role in controlling excitability in a number of systems, such as regulation of the contraction of smooth muscle, the tuning of hair cells in the cochlea, regulation of transmitter release, and innate immunity. In smooth muscles, its activation by high level of Ca(2+), caused by ryanodine receptors in the sarcoplasmic reticulum, regulates the membrane potential. In cochlea cells, its number and kinetic properties partly determine the characteristic frequency of each hair cell and thereby helps to establish a tonotopic map. Kinetics of KCNMA1 channels are determined by alternative splicing, phosphorylation status and its combination with modulating beta subunits. Highly sensitive to both iberiotoxin (IbTx) and charybdotoxin (CTX).

Sus scrofa (taxid: 9823)

>sp|Q12791|KCMA1_HUMAN Calcium-activated potassium channel subunit alpha-1 OS=Homo sapiens GN=KCNMA1 PE=1 SV=2

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)

Query: 30  ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
           +R WW FL SS+ TF  GL I+LLWR   +   +CC           K KE + I  G  
Sbjct: 84  QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGSS 136

Query: 87  EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
           + +GT                +MT  KDWAG +IS QT TGR+LV
Sbjct: 137 QADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 181

Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). It is also activated by the concentration of cytosolic Mg(2+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Plays a key role in controlling excitability in a number of systems, such as regulation of the contraction of smooth muscle, the tuning of hair cells in the cochlea, regulation of transmitter release, and innate immunity. In smooth muscles, its activation by high level of Ca(2+), caused by ryanodine receptors in the sarcoplasmic reticulum, regulates the membrane potential. In cochlea cells, its number and kinetic properties partly determine the characteristic frequency of each hair cell and thereby helps to establish a tonotopic map. Kinetics of KCNMA1 channels are determined by alternative splicing, phosphorylation status and its combination with modulating beta subunits. Highly sensitive to both iberiotoxin (IbTx) and charybdotoxin (CTX).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
170038835	1150	calcium-activated potassium channel alph	0.906	0.093	0.759	3e-45
270001010	1188	hypothetical protein TcasGA2_TC011288 [T	0.864	0.085	0.807	2e-43
357609181	1226	calcium-activated potassium channel alph	0.872	0.084	0.776	3e-43
347970447	1154	AGAP003709-PF [Anopheles gambiae str. PE	0.906	0.092	0.768	5e-43
347970443	1154	AGAP003709-PB [Anopheles gambiae str. PE	0.906	0.092	0.768	5e-43
347970449	1154	AGAP003709-PD [Anopheles gambiae str. PE	0.906	0.092	0.768	5e-43
347970445	1154	AGAP003709-PE [Anopheles gambiae str. PE	0.906	0.092	0.768	5e-43
347970451	1154	AGAP003709-PA [Anopheles gambiae str. PE	0.906	0.092	0.768	6e-43
347970453	1154	AGAP003709-PC [Anopheles gambiae str. PE	0.906	0.092	0.768	6e-43
340718576	1168	PREDICTED: calcium-activated potassium c	0.771	0.077	0.858	1e-42

>gi|170038835|ref|XP_001847253.1| calcium-activated potassium channel alpha chain [Culex quinquefasciatus] gi|167862444|gb|EDS25827.1| calcium-activated potassium channel alpha chain [Culex quinquefasciatus]

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 82/108 (75%), Positives = 94/108 (87%), Gaps = 1/108 (0%)

Query: 9   CKPTESILIS-TATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPE 67
           C    ++L +    +D+D CL+ RKWWCFLLSSIFTF+ GL++VLLWR FAF+CCRKEPE
Sbjct: 4   CDEEAAVLTTEIPATDLDDCLKVRKWWCFLLSSIFTFLAGLLVVLLWRAFAFLCCRKEPE 63

Query: 68  LSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
           L+PNDPKQKEQKA RQGKQ+FEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 64  LAPNDPKQKEQKASRQGKQDFEGTFMTEAKDWAGELISGQTTTGRILV 111

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270001010|gb|EEZ97457.1| hypothetical protein TcasGA2_TC011288 [Tribolium castaneum]

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 84/104 (80%), Positives = 91/104 (87%), Gaps = 2/104 (1%)

Query: 12  TESILISTATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPN 71
           TE  + STAT D   CL ERK+WCFLLSSIFTF+ GL+IVL+WRLFAF+CCRKE +  PN
Sbjct: 8   TEPPISSTATPDP--CLDERKYWCFLLSSIFTFLAGLLIVLVWRLFAFLCCRKEVQYGPN 65

Query: 72  DPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
           DPKQKEQKA RQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 66  DPKQKEQKAARQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 109

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357609181|gb|EHJ66336.1| calcium-activated potassium channel alpha subunit [Danaus plexippus]

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 80/103 (77%), Positives = 88/103 (85%)

Query: 13  ESILISTATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPND 72
           E+    T+   +  CL  RKWWCFLLSSI TF+ GL++VLLWRL AF+CCRKEPEL+PND
Sbjct: 7   EATTAPTSEDGLPDCLSVRKWWCFLLSSIITFLAGLLVVLLWRLCAFVCCRKEPELAPND 66

Query: 73  PKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
           PKQKEQKA RQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 67  PKQKEQKAARQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 109

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970447|ref|XP_003436579.1| AGAP003709-PF [Anopheles gambiae str. PEST] gi|333468940|gb|EGK97123.1| AGAP003709-PF [Anopheles gambiae str. PEST]

 Score =  177 bits (450), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 1/108 (0%)

Query: 9   CKPTESILIST-ATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPE 67
           C   +S+L +    +D+D CL+ RKWWCFLLSSIFTF+ GL+ VLLWR FAF+CCRKEPE
Sbjct: 4   CDEEQSVLTTELPPTDLDDCLRVRKWWCFLLSSIFTFLAGLLAVLLWRAFAFLCCRKEPE 63

Query: 68  LSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
           L+PNDPKQKEQKA RQGKQ+FEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 64  LAPNDPKQKEQKASRQGKQDFEGTFMTEAKDWAGELISGQTTTGRILV 111

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970443|ref|XP_003436577.1| AGAP003709-PB [Anopheles gambiae str. PEST] gi|333468936|gb|EGK97119.1| AGAP003709-PB [Anopheles gambiae str. PEST]

 Score =  177 bits (450), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 1/108 (0%)

Query: 9   CKPTESILIST-ATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPE 67
           C   +S+L +    +D+D CL+ RKWWCFLLSSIFTF+ GL+ VLLWR FAF+CCRKEPE
Sbjct: 4   CDEEQSVLTTELPPTDLDDCLRVRKWWCFLLSSIFTFLAGLLAVLLWRAFAFLCCRKEPE 63

Query: 68  LSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
           L+PNDPKQKEQKA RQGKQ+FEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 64  LAPNDPKQKEQKASRQGKQDFEGTFMTEAKDWAGELISGQTTTGRILV 111

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970449|ref|XP_003436580.1| AGAP003709-PD [Anopheles gambiae str. PEST] gi|333468938|gb|EGK97121.1| AGAP003709-PD [Anopheles gambiae str. PEST]

 Score =  177 bits (450), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 1/108 (0%)

Query: 9   CKPTESILIST-ATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPE 67
           C   +S+L +    +D+D CL+ RKWWCFLLSSIFTF+ GL+ VLLWR FAF+CCRKEPE
Sbjct: 4   CDEEQSVLTTELPPTDLDDCLRVRKWWCFLLSSIFTFLAGLLAVLLWRAFAFLCCRKEPE 63

Query: 68  LSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
           L+PNDPKQKEQKA RQGKQ+FEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 64  LAPNDPKQKEQKASRQGKQDFEGTFMTEAKDWAGELISGQTTTGRILV 111

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970445|ref|XP_003436578.1| AGAP003709-PE [Anopheles gambiae str. PEST] gi|333468939|gb|EGK97122.1| AGAP003709-PE [Anopheles gambiae str. PEST]

 Score =  177 bits (450), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 1/108 (0%)

Query: 9   CKPTESILIST-ATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPE 67
           C   +S+L +    +D+D CL+ RKWWCFLLSSIFTF+ GL+ VLLWR FAF+CCRKEPE
Sbjct: 4   CDEEQSVLTTELPPTDLDDCLRVRKWWCFLLSSIFTFLAGLLAVLLWRAFAFLCCRKEPE 63

Query: 68  LSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
           L+PNDPKQKEQKA RQGKQ+FEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 64  LAPNDPKQKEQKASRQGKQDFEGTFMTEAKDWAGELISGQTTTGRILV 111

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970451|ref|XP_313505.5| AGAP003709-PA [Anopheles gambiae str. PEST] gi|333468935|gb|EAA08773.6| AGAP003709-PA [Anopheles gambiae str. PEST]

 Score =  177 bits (450), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 1/108 (0%)

Query: 9   CKPTESILIST-ATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPE 67
           C   +S+L +    +D+D CL+ RKWWCFLLSSIFTF+ GL+ VLLWR FAF+CCRKEPE
Sbjct: 4   CDEEQSVLTTELPPTDLDDCLRVRKWWCFLLSSIFTFLAGLLAVLLWRAFAFLCCRKEPE 63

Query: 68  LSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
           L+PNDPKQKEQKA RQGKQ+FEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 64  LAPNDPKQKEQKASRQGKQDFEGTFMTEAKDWAGELISGQTTTGRILV 111

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970453|ref|XP_003436581.1| AGAP003709-PC [Anopheles gambiae str. PEST] gi|333468937|gb|EGK97120.1| AGAP003709-PC [Anopheles gambiae str. PEST]

 Score =  177 bits (450), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 1/108 (0%)

Query: 9   CKPTESILIST-ATSDIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPE 67
           C   +S+L +    +D+D CL+ RKWWCFLLSSIFTF+ GL+ VLLWR FAF+CCRKEPE
Sbjct: 4   CDEEQSVLTTELPPTDLDDCLRVRKWWCFLLSSIFTFLAGLLAVLLWRAFAFLCCRKEPE 63

Query: 68  LSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
           L+PNDPKQKEQKA RQGKQ+FEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 64  LAPNDPKQKEQKASRQGKQDFEGTFMTEAKDWAGELISGQTTTGRILV 111

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340718576|ref|XP_003397741.1| PREDICTED: calcium-activated potassium channel slowpoke-like [Bombus terrestris]

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 79/92 (85%), Positives = 85/92 (92%), Gaps = 1/92 (1%)

Query: 24  IDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPNDPKQKEQKAIRQ 83
           +D CL+ERKWWCFLLSSIFTF+ GL+IVLLWR FAF+CCRKEPE +PNDPKQKEQK  RQ
Sbjct: 28  VDDCLKERKWWCFLLSSIFTFLAGLLIVLLWRAFAFLCCRKEPEFAPNDPKQKEQKTSRQ 87

Query: 84  GKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
           GK EFEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 88  GK-EFEGTFMTEAKDWAGELISGQTTTGRILV 118

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
FB|FBgn0003429	1200	slo "slowpoke" [Drosophila mel	0.779	0.076	0.827	1.2e-37
UNIPROTKB|H7BRM5	1118	slo-1 "Protein SLO-1, isoform	0.745	0.078	0.438	3e-16
UNIPROTKB|H7BRM7	1131	slo-1 "SLO-1" [Caenorhabditis	0.745	0.077	0.438	3.1e-16
UNIPROTKB|H8ESD8	1138	slo-1 "Protein SLO-1, isoform	0.745	0.077	0.438	3.1e-16
UNIPROTKB|H8ESE4	1138	slo-1 "Protein SLO-1, isoform	0.745	0.077	0.438	3.1e-16
UNIPROTKB|H8ESE5	1140	slo-1 "Protein SLO-1, isoform	0.745	0.077	0.438	3.1e-16
UNIPROTKB|Q95V25	1140	slo-1 "Calcium-activated potas	0.745	0.077	0.438	3.1e-16
UNIPROTKB|H7BRM4	1153	slo-1 "Protein SLO-1, isoform	0.745	0.076	0.438	3.1e-16
UNIPROTKB|H8ESE3	1153	slo-1 "Protein SLO-1, isoform	0.745	0.076	0.438	3.1e-16
WB|WBGene00004830	1160	slo-1 [Caenorhabditis elegans	0.745	0.075	0.438	3.2e-16

FB|FBgn0003429 slo "slowpoke" [Drosophila melanogaster (taxid:7227)]

 Score = 416 (151.5 bits), Expect = 1.2e-37, P = 1.2e-37
 Identities = 77/93 (82%), Positives = 84/93 (90%)

Query:    23 DIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPNDPKQKEQKAIR 82
             D D CL+ RK+WCFLLSSIFTF+ GL++VLLWR FAF+CCRKEP+L PNDPKQKEQKA R
Sbjct:    39 DADDCLKVRKYWCFLLSSIFTFLAGLLVVLLWRAFAFVCCRKEPDLGPNDPKQKEQKASR 98

Query:    83 QGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
               KQEFEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct:    99 N-KQEFEGTFMTEAKDWAGELISGQTTTGRILV 130

GO:0016020 "membrane" evidence=IDA

GO:0015269 "calcium-activated potassium channel activity" evidence=NAS;IDA

GO:0006813 "potassium ion transport" evidence=NAS;IDA

GO:0045433 "male courtship behavior, veined wing generated song production" evidence=NAS;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=NAS

GO:0007623 "circadian rhythm" evidence=IMP

GO:0000166 "nucleotide binding" evidence=IEA

GO:0042493 "response to drug" evidence=IMP

GO:0043005 "neuron projection" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0048512 "circadian behavior" evidence=IMP

GO:0008076 "voltage-gated potassium channel complex" evidence=IBA

GO:0060072 "large conductance calcium-activated potassium channel activity" evidence=IBA

GO:0071805 "potassium ion transmembrane transport" evidence=IBA

GO:0005249 "voltage-gated potassium channel activity" evidence=IBA

UNIPROTKB|H7BRM5 slo-1 "Protein SLO-1, isoform h" [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 3.0e-16, P = 3.0e-16
 Identities = 46/105 (43%), Positives = 68/105 (64%)

Query:    27 CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK------EP-------ELSPNDP 73
             CL+ERK+WCFLLSSI TF   +++V++WR+   +CC++      EP       +++ N  
Sbjct:    39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98

Query:    74 KQKEQKA---IRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
             K    +    ++Q +++  G +MTEAKDWAGELISGQ+ TGR LV
Sbjct:    99 KHAPSETDPFLKQQEEKHLG-WMTEAKDWAGELISGQSLTGRFLV 142

GO:0071805 "potassium ion transmembrane transport" evidence=IBA

GO:0060072 "large conductance calcium-activated potassium channel activity" evidence=IBA

GO:0008076 "voltage-gated potassium channel complex" evidence=IBA

GO:0005249 "voltage-gated potassium channel activity" evidence=IBA

UNIPROTKB|H7BRM7 slo-1 "SLO-1" [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 46/105 (43%), Positives = 68/105 (64%)

Query:    27 CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK------EP-------ELSPNDP 73
             CL+ERK+WCFLLSSI TF   +++V++WR+   +CC++      EP       +++ N  
Sbjct:    39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98

Query:    74 KQKEQKA---IRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
             K    +    ++Q +++  G +MTEAKDWAGELISGQ+ TGR LV
Sbjct:    99 KHAPSETDPFLKQQEEKHLG-WMTEAKDWAGELISGQSLTGRFLV 142

GO:0071805 "potassium ion transmembrane transport" evidence=IBA

GO:0060072 "large conductance calcium-activated potassium channel activity" evidence=IBA

GO:0008076 "voltage-gated potassium channel complex" evidence=IBA

GO:0005249 "voltage-gated potassium channel activity" evidence=IBA

UNIPROTKB|H8ESD8 slo-1 "Protein SLO-1, isoform k" [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 46/105 (43%), Positives = 68/105 (64%)

Query:    27 CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK------EP-------ELSPNDP 73
             CL+ERK+WCFLLSSI TF   +++V++WR+   +CC++      EP       +++ N  
Sbjct:    39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98

Query:    74 KQKEQKA---IRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
             K    +    ++Q +++  G +MTEAKDWAGELISGQ+ TGR LV
Sbjct:    99 KHAPSETDPFLKQQEEKHLG-WMTEAKDWAGELISGQSLTGRFLV 142

GO:0071805 "potassium ion transmembrane transport" evidence=IBA

GO:0060072 "large conductance calcium-activated potassium channel activity" evidence=IBA

GO:0008076 "voltage-gated potassium channel complex" evidence=IBA

GO:0005249 "voltage-gated potassium channel activity" evidence=IBA

UNIPROTKB|H8ESE4 slo-1 "Protein SLO-1, isoform g" [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 46/105 (43%), Positives = 68/105 (64%)

Query:    27 CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK------EP-------ELSPNDP 73
             CL+ERK+WCFLLSSI TF   +++V++WR+   +CC++      EP       +++ N  
Sbjct:    39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98

Query:    74 KQKEQKA---IRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
             K    +    ++Q +++  G +MTEAKDWAGELISGQ+ TGR LV
Sbjct:    99 KHAPSETDPFLKQQEEKHLG-WMTEAKDWAGELISGQSLTGRFLV 142

GO:0071805 "potassium ion transmembrane transport" evidence=IBA

GO:0060072 "large conductance calcium-activated potassium channel activity" evidence=IBA

GO:0008076 "voltage-gated potassium channel complex" evidence=IBA

GO:0005249 "voltage-gated potassium channel activity" evidence=IBA

UNIPROTKB|H8ESE5 slo-1 "Protein SLO-1, isoform f" [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 46/105 (43%), Positives = 68/105 (64%)

Query:    27 CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK------EP-------ELSPNDP 73
             CL+ERK+WCFLLSSI TF   +++V++WR+   +CC++      EP       +++ N  
Sbjct:    39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98

Query:    74 KQKEQKA---IRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
             K    +    ++Q +++  G +MTEAKDWAGELISGQ+ TGR LV
Sbjct:    99 KHAPSETDPFLKQQEEKHLG-WMTEAKDWAGELISGQSLTGRFLV 142

GO:0071805 "potassium ion transmembrane transport" evidence=IBA

GO:0060072 "large conductance calcium-activated potassium channel activity" evidence=IBA

GO:0008076 "voltage-gated potassium channel complex" evidence=IBA

GO:0005249 "voltage-gated potassium channel activity" evidence=IBA

UNIPROTKB|Q95V25 slo-1 "Calcium-activated potassium channel slo-1" [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 46/105 (43%), Positives = 68/105 (64%)

Query:    27 CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK------EP-------ELSPNDP 73
             CL+ERK+WCFLLSSI TF   +++V++WR+   +CC++      EP       +++ N  
Sbjct:    39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98

Query:    74 KQKEQKA---IRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
             K    +    ++Q +++  G +MTEAKDWAGELISGQ+ TGR LV
Sbjct:    99 KHAPSETDPFLKQQEEKHLG-WMTEAKDWAGELISGQSLTGRFLV 142

GO:0071805 "potassium ion transmembrane transport" evidence=IBA

GO:0060072 "large conductance calcium-activated potassium channel activity" evidence=IBA

GO:0008076 "voltage-gated potassium channel complex" evidence=IBA

GO:0005249 "voltage-gated potassium channel activity" evidence=IBA

UNIPROTKB|H7BRM4 slo-1 "Protein SLO-1, isoform e" [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 46/105 (43%), Positives = 68/105 (64%)

Query:    27 CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK------EP-------ELSPNDP 73
             CL+ERK+WCFLLSSI TF   +++V++WR+   +CC++      EP       +++ N  
Sbjct:    39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98

Query:    74 KQKEQKA---IRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
             K    +    ++Q +++  G +MTEAKDWAGELISGQ+ TGR LV
Sbjct:    99 KHAPSETDPFLKQQEEKHLG-WMTEAKDWAGELISGQSLTGRFLV 142

GO:0071805 "potassium ion transmembrane transport" evidence=IBA

GO:0060072 "large conductance calcium-activated potassium channel activity" evidence=IBA

GO:0008076 "voltage-gated potassium channel complex" evidence=IBA

GO:0005249 "voltage-gated potassium channel activity" evidence=IBA

UNIPROTKB|H8ESE3 slo-1 "Protein SLO-1, isoform j" [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 46/105 (43%), Positives = 68/105 (64%)

Query:    27 CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK------EP-------ELSPNDP 73
             CL+ERK+WCFLLSSI TF   +++V++WR+   +CC++      EP       +++ N  
Sbjct:    39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98

Query:    74 KQKEQKA---IRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
             K    +    ++Q +++  G +MTEAKDWAGELISGQ+ TGR LV
Sbjct:    99 KHAPSETDPFLKQQEEKHLG-WMTEAKDWAGELISGQSLTGRFLV 142

GO:0071805 "potassium ion transmembrane transport" evidence=IBA

GO:0060072 "large conductance calcium-activated potassium channel activity" evidence=IBA

GO:0008076 "voltage-gated potassium channel complex" evidence=IBA

GO:0005249 "voltage-gated potassium channel activity" evidence=IBA

WB|WBGene00004830 slo-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 3.2e-16, P = 3.2e-16
 Identities = 46/105 (43%), Positives = 68/105 (64%)

Query:    27 CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK------EP-------ELSPNDP 73
             CL+ERK+WCFLLSSI TF   +++V++WR+   +CC++      EP       +++ N  
Sbjct:    39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98

Query:    74 KQKEQKA---IRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
             K    +    ++Q +++  G +MTEAKDWAGELISGQ+ TGR LV
Sbjct:    99 KHAPSETDPFLKQQEEKHLG-WMTEAKDWAGELISGQSLTGRFLV 142

GO:0015269 "calcium-activated potassium channel activity" evidence=IEA;IDA

GO:0005249 "voltage-gated potassium channel activity" evidence=IEA;IDA

GO:0006813 "potassium ion transport" evidence=IEA;IDA

GO:0008076 "voltage-gated potassium channel complex" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0060072 "large conductance calcium-activated potassium channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0040011 "locomotion" evidence=IGI

GO:0050804 "regulation of synaptic transmission" evidence=IGI

GO:0046928 "regulation of neurotransmitter secretion" evidence=IMP

GO:0048149 "behavioral response to ethanol" evidence=IMP

GO:0042493 "response to drug" evidence=IMP

GO:0045214 "sarcomere organization" evidence=IGI

GO:0043050 "pharyngeal pumping" evidence=IMP

GO:0045202 "synapse" evidence=IDA

GO:0031430 "M band" evidence=IDA

GO:0055120 "striated muscle dense body" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q03720	SLO_DROME	No assigned EC number	0.8279	0.7796	0.0766	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	118
KOG1420|consensus	1103		100.0

>KOG1420|consensus

Probab=100.00  E-value=5.7e-35  Score=262.47  Aligned_cols=113  Identities=39%  Similarity=0.584  Sum_probs=96.5

Q ss_pred             cccccccccc-eeeeccCCc---hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCchhhhHHH
Q psy6104           5 CCVLCKPTES-ILISTATSD---IDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPNDPKQKEQKA   80 (118)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~~---~~~C~~~R~~waFLlSSivTF~gGLliIliwR~i~~~cc~k~~~~~~~~~~~~~~~~   80 (118)
                      -+++|+.+.+ ....+++++   ...|++.|||||||+||+|||||||||||+||.++|+||++.+...++.++|+.++.
T Consensus        17 ~~s~~~~ss~~s~~~ep~~~~~~~~~~m~vr~~w~fl~ss~~tf~~gl~iillwr~~~~~~~~~~~~~g~~~~~qk~~~~   96 (1103)
T KOG1420|consen   17 SSSSSSSSSSSSSVHEPKMDALIIPVTMEVRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGGKTKEAQKINNG   96 (1103)
T ss_pred             CCCCCCcccccccccCCccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeeccCCCCCcHhhhhhcc
Confidence            3556655432 233444444   679999999999999999999999999999999999999999988888888888877


Q ss_pred             HhccccceeeeehhhhhhHHHhHhhhccccceEEEEeC
Q psy6104          81 IRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILVPNV  118 (118)
Q Consensus        81 ~~~~~~~~evgwmt~~KDwag~LISaQT~tGRILVVLV  118 (118)
                      +.|.. +.|+||||++|||||+||||||+|||||||||
T Consensus        97 s~~~~-~~e~~~mt~akdwagelisgqtltgr~lvvlv  133 (1103)
T KOG1420|consen   97 SSQAD-AAEVGWMTSAKDWAGELISGQTLTGRVLVVLV  133 (1103)
T ss_pred             cchhh-hhhheeeEEehhhhcceeecccccceeeehhH
Confidence            76654 69999999999999999999999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	118
2k9j_B	43	Integrin beta-3; transmembrane complex, cell adhes	92.24
2knc_B	79	Integrin beta-3; transmembrane signaling, protein	91.59

>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A

Probab=92.24  E-value=0.19  Score=30.40  Aligned_cols=34  Identities=26%  Similarity=0.411  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy6104          31 RKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK   64 (118)
Q Consensus        31 R~~waFLlSSivTF~gGLliIliwR~i~~~cc~k   64 (118)
                      -.++..+-....+-+.||+++++||++.++-=||
T Consensus         8 n~~~Iv~gvi~~ivliGl~lLliwk~~~~i~Drr   41 (43)
T 2k9j_B            8 DILVVLLSVMGAILLIGLAALLIWKLLITIHDRK   41 (43)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEeehHHHHHHHHHHHHHHHHHHHHHHHheehhh
Confidence            3445555555557889999999999997665444

>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=91.59  E-value=0.095  Score=35.21  Aligned_cols=34  Identities=26%  Similarity=0.411  Sum_probs=26.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy6104          31 RKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRK   64 (118)
Q Consensus        31 R~~waFLlSSivTF~gGLliIliwR~i~~~cc~k   64 (118)
                      -.+...+-....+.+.||+++++||++.++-=||
T Consensus         9 n~~~Iv~gvi~gilliGllllliwk~~~~i~Drr   42 (79)
T 2knc_B            9 DILVVLLSVMGAILLIGLAALLIWKLLITIHDRK   42 (79)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567777777778999999999999997665554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00