Psyllid ID: psy6258

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MNRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLSGVF
Secondary Structure (PSIPRED)
cccEEEEEEEEccccccccccccccccEEccccccEEEEccccccccccccccccccccccccHHHHHHHcccccccccccccccccccEEEcccccEEEEEEcccccccccccccccccccccccHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccEEEHHEHHccccccccEEccccccEEcccccEEEEEEcccccccccccccccccccccccEEEEEEEEEccccccccccEccccccEEccccccEEEEEEcccccccccccccccccEEEcccEEEEEEcccc
Coil and Loop (DISEMBL)
mnraemssveltdvelggatifpslnltvfpekgsaVFWHNAHANTLLDYWMyhsgcpvalgnKWGKLLLSGltdvelggatifpslnltvfpekgsAVFWYNAHANTLLDYrmyhsgcpvalgnkwgkLLLSGVF
Flexible Loop (DISEMBL)
MNRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLSGVF
Low Complexity Region (SEG)
MNRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLSGVF
Disordered region (IsUnstruct)
**********LTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLS***
Disordered Region (DISOPRED)
MNRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLSGVF
Disordered Region (DISEMBL)
**********LTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLSGVF
Disordered Region (DISPRO)
MNRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLSGVF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLSGVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	136	2.2.26 [Sep-21-2011]
P54001	534	Prolyl 4-hydroxylase subu	yes	N/A	0.477	0.121	0.484	3e-13
Q5RAG8	534	Prolyl 4-hydroxylase subu	yes	N/A	0.477	0.121	0.484	3e-13
Q60715	534	Prolyl 4-hydroxylase subu	yes	N/A	0.477	0.121	0.484	3e-13
P13674	534	Prolyl 4-hydroxylase subu	no	N/A	0.477	0.121	0.484	3e-13
O15460	535	Prolyl 4-hydroxylase subu	no	N/A	0.433	0.110	0.508	6e-13
Q1RMU3	534	Prolyl 4-hydroxylase subu	yes	N/A	0.477	0.121	0.484	6e-13
Q60716	537	Prolyl 4-hydroxylase subu	no	N/A	0.433	0.109	0.508	6e-13
Q5ZLK5	534	Prolyl 4-hydroxylase subu	yes	N/A	0.477	0.121	0.469	8e-13
P16924	516	Prolyl 4-hydroxylase subu	no	N/A	0.477	0.125	0.469	1e-12
Q20065	539	Prolyl 4-hydroxylase subu	yes	N/A	0.477	0.120	0.439	2e-09

>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 62  GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
           GN+    L   ++DV  GGAT+FP +  +V+P+KG+AVFWYN  A+   DY   H+ CPV
Sbjct: 447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505

Query: 122 ALGNKW 127
            +GNKW
Sbjct: 506 LVGNKW 511

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.
Rattus norvegicus (taxid: 10116)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 2

>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 62  GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
           GN+    L   ++DV  GGAT+FP +  +V+P+KG+AVFWYN  A+   DY   H+ CPV
Sbjct: 447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505

Query: 122 ALGNKW 127
            +GNKW
Sbjct: 506 LVGNKW 511

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 62  GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
           GN+    L   ++DV  GGAT+FP +  +V+P+KG+AVFWYN  A+   DY   H+ CPV
Sbjct: 447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505

Query: 122 ALGNKW 127
            +GNKW
Sbjct: 506 LVGNKW 511

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 62  GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
           GN+    L   ++DV  GGAT+FP +  +V+P+KG+AVFWYN  A+   DY   H+ CPV
Sbjct: 447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505

Query: 122 ALGNKW 127
            +GNKW
Sbjct: 506 LVGNKW 511

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 41/59 (69%)

Query: 69  LLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
            L+ ++DVE GGAT+FP L   ++P+KG+AVFWYN   +   DYR  H+ CPV +G KW
Sbjct: 454 FLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKW 512

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 62  GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
           GN+    L   ++DV  GGAT+FP +  +V+P+KG+AVFWYN  A+   DY   H+ CPV
Sbjct: 447 GNRIATWLFY-MSDVLAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505

Query: 122 ALGNKW 127
            +GNKW
Sbjct: 506 LVGNKW 511

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 41/59 (69%)

Query: 69  LLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
            L+ ++DVE GGAT+FP L   ++P+KG+AVFWYN   +   DYR  H+ CPV +G KW
Sbjct: 456 FLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKW 514

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 62  GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
           GN+    L + ++DVE GGAT+FP     ++P+KG+AVFWYN   +   DYR  H+ CPV
Sbjct: 447 GNRLATFL-NYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPV 505

Query: 122 ALGNKW 127
            +G KW
Sbjct: 506 LVGCKW 511

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 62  GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
           GN+    L   ++DV  GGAT+FP +  +V+P+KG+AVFWYN   +   DY   H+ CPV
Sbjct: 429 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPV 487

Query: 122 ALGNKW 127
            +GNKW
Sbjct: 488 LVGNKW 493

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 62  GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
           GN+   +L   ++  E GGAT+F  L   VFP K  A+FWYN   +   D R  H+ CPV
Sbjct: 437 GNRIATVLFY-MSQPERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPV 495

Query: 122 ALGNKW 127
            LG KW
Sbjct: 496 LLGVKW 501

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
347972274	514	AGAP004611-PA [Anopheles gambiae str. PE	0.404	0.107	0.618	4e-15
170029530	522	prolyl 4-hydroxylase subunit alpha-1 [Cu	0.485	0.126	0.537	4e-15
92096574	508	LOC557059 protein [Danio rerio]	0.404	0.108	0.6	8e-14
239915958	490	prolyl 4-hydroxylase alpha II-like precu	0.404	0.112	0.6	8e-14
170064953	509	prolyl 4-hydroxylase alpha subunit 1 [Cu	0.485	0.129	0.507	7e-13
344252711	584	Prolyl 4-hydroxylase subunit alpha-2 [Cr	0.448	0.104	0.540	1e-12
56118630	527	prolyl 4-hydroxylase, alpha polypeptide	0.492	0.127	0.485	1e-12
157114983	448	prolyl 4-hydroxylase alpha subunit 1, pu	0.470	0.142	0.5	1e-12
195341558	485	GM12146 [Drosophila sechellia] gi|194131	0.411	0.115	0.571	1e-12
281348666	505	hypothetical protein PANDA_000722 [Ailur	0.463	0.124	0.523	1e-12

>gi|347972274|ref|XP_001237637.3| AGAP004611-PA [Anopheles gambiae str. PEST] gi|333469330|gb|EAU76664.3| AGAP004611-PA [Anopheles gambiae str. PEST]

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/55 (61%), Positives = 43/55 (78%)

Query: 73  LTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
           L+DV +GGAT+FP L L VFP+KGSA+FWYN HAN  +D+R  H  CPV +G+KW
Sbjct: 437 LSDVAIGGATVFPQLGLGVFPQKGSAIFWYNLHANGTVDHRTLHGACPVFVGSKW 491

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170029530|ref|XP_001842645.1| prolyl 4-hydroxylase subunit alpha-1 [Culex quinquefasciatus] gi|167863229|gb|EDS26612.1| prolyl 4-hydroxylase subunit alpha-1 [Culex quinquefasciatus]

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%)

Query: 61  LGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCP 120
           +GN+   L+   L+DVE+GG T+FP L+L VFP KGSA+FW+N H N  +D RM H+GCP
Sbjct: 422 MGNRLATLMYY-LSDVEVGGGTVFPRLSLGVFPIKGSAIFWHNVHHNGNVDERMLHAGCP 480

Query: 121 VALGNKW 127
             +G+KW
Sbjct: 481 TLIGSKW 487

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|92096574|gb|AAI15350.1| LOC557059 protein [Danio rerio]

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/55 (60%), Positives = 43/55 (78%)

Query: 73  LTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
           ++DVE+GGAT+F ++ + V PEKGSAVFWYN H N  LD +  H+GCPV +GNKW
Sbjct: 431 MSDVEVGGATVFTNVGVAVKPEKGSAVFWYNLHKNGELDLKTKHAGCPVLVGNKW 485

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|239915958|ref|NP_001070123.2| prolyl 4-hydroxylase alpha II-like precursor [Danio rerio]

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/55 (60%), Positives = 43/55 (78%)

Query: 73  LTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
           ++DVE+GGAT+F ++ + V PEKGSAVFWYN H N  LD +  H+GCPV +GNKW
Sbjct: 413 MSDVEVGGATVFTNVGVAVKPEKGSAVFWYNLHKNGELDLKTKHAGCPVLVGNKW 467

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|170064953|ref|XP_001867740.1| prolyl 4-hydroxylase alpha subunit 1 [Culex quinquefasciatus] gi|167882143|gb|EDS45526.1| prolyl 4-hydroxylase alpha subunit 1 [Culex quinquefasciatus]

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 61  LGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCP 120
           +GN+   ++   L+DVE+GGAT+FP L L VFP KGSA+ WYN + N   D R  H+ CP
Sbjct: 417 VGNRIATVMFY-LSDVEIGGATVFPQLGLAVFPRKGSAILWYNLYRNGKGDRRTLHAACP 475

Query: 121 VALGNKW 127
           V  G+KW
Sbjct: 476 VLSGSKW 482

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|344252711|gb|EGW08815.1| Prolyl 4-hydroxylase subunit alpha-2 [Cricetulus griseus]

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/61 (54%), Positives = 43/61 (70%)

Query: 69  LLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWG 128
           L S ++DVE GGAT+FP L   ++P+KG+AVFWYN   +   DYR  H+ CPV +G KWG
Sbjct: 466 LCSQMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWG 525

Query: 129 K 129
           K
Sbjct: 526 K 526

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|56118630|ref|NP_001007975.1| prolyl 4-hydroxylase, alpha polypeptide 2 precursor [Xenopus (Silurana) tropicalis] gi|51513259|gb|AAH80485.1| p4ha2 protein [Xenopus (Silurana) tropicalis]

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 62  GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
           GN+    L + ++DVE GGAT+FP     ++P+KG+AVFWYN   +   DYR  H+ CPV
Sbjct: 448 GNRLATFL-NYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPV 506

Query: 122 ALGNKWGK 129
            +G+KWGK
Sbjct: 507 LVGSKWGK 514

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|157114983|ref|XP_001658090.1| prolyl 4-hydroxylase alpha subunit 1, putative [Aedes aegypti] gi|108877085|gb|EAT41310.1| AAEL007032-PA, partial [Aedes aegypti]

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/64 (50%), Positives = 42/64 (65%)

Query: 73  LTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLL 132
           ++DVE GGAT+FP + + VFP+KGSA+FWYN   +   D R  H  CPV LG+KWG   +
Sbjct: 384 ISDVEQGGATVFPQIGVGVFPKKGSAIFWYNLLPDGTGDERTLHGACPVLLGSKWGMFCM 443

Query: 133 SGVF 136
              F
Sbjct: 444 QQYF 447

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195341558|ref|XP_002037373.1| GM12146 [Drosophila sechellia] gi|194131489|gb|EDW53532.1| GM12146 [Drosophila sechellia]

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/56 (57%), Positives = 39/56 (69%)

Query: 73  LTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWG 128
           L DV  GGAT FP LN+TVFP+ G+ + WYN H   LL  R  H+GCPV +G+KWG
Sbjct: 430 LNDVPQGGATHFPGLNITVFPKFGTVLMWYNLHTEGLLHVRTMHTGCPVIVGSKWG 485

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|281348666|gb|EFB24250.1| hypothetical protein PANDA_000722 [Ailuropoda melanoleuca]

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/63 (52%), Positives = 44/63 (69%)

Query: 69  LLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWG 128
            L+ ++DVE GGAT+FP L   ++P+KG+AVFWYN   +   DYR  H+ CPV +G KWG
Sbjct: 443 FLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWG 502

Query: 129 KLL 131
           K L
Sbjct: 503 KWL 505

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
ZFIN|ZDB-GENE-060929-954	508	zgc:152670 "zgc:152670" [Danio	0.404	0.108	0.6	1.2e-14
UNIPROTKB|I3L5Y0	525	P4HA2 "Uncharacterized protein	0.536	0.139	0.472	7.1e-14
FB|FBgn0052201	520	CG32201 [Drosophila melanogast	0.485	0.126	0.447	3.1e-13
FB|FBgn0051014	540	PH4alphaSG1 "prolyl-4-hydroxyl	0.463	0.116	0.537	1.2e-12
FB|FBgn0051524	536	CG31524 [Drosophila melanogast	0.404	0.102	0.545	1.5e-12
FB|FBgn0051015	525	PH4alphaPV "prolyl-4-hydroxyla	0.404	0.104	0.527	2.3e-12
UNIPROTKB|E2RLA2	534	P4HA1 "Uncharacterized protein	0.477	0.121	0.484	2.4e-12
UNIPROTKB|E2RLB8	534	P4HA1 "Uncharacterized protein	0.477	0.121	0.484	2.4e-12
UNIPROTKB|P13674	534	P4HA1 "Prolyl 4-hydroxylase su	0.477	0.121	0.484	2.4e-12
UNIPROTKB|A1X898	534	P4HA1 "Uncharacterized protein	0.477	0.121	0.484	2.4e-12

ZFIN|ZDB-GENE-060929-954 zgc:152670 "zgc:152670" [Danio rerio (taxid:7955)]

 Score = 195 (73.7 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 33/55 (60%), Positives = 43/55 (78%)

Query:    73 LTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
             ++DVE+GGAT+F ++ + V PEKGSAVFWYN H N  LD +  H+GCPV +GNKW
Sbjct:   431 MSDVEVGGATVFTNVGVAVKPEKGSAVFWYNLHKNGELDLKTKHAGCPVLVGNKW 485

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=IEA

UNIPROTKB|I3L5Y0 P4HA2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 188 (71.2 bits), Expect = 7.1e-14, P = 7.1e-14
 Identities = 35/74 (47%), Positives = 49/74 (66%)

Query:    62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
             GN+    L + ++DVE GGAT+FP L   ++P+KG+AVFWYN   +   DYR  H+ CPV
Sbjct:   446 GNRLATFL-NYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPV 504

Query:   122 ALGNKWGKLLLSGV 135
              +G KWG+ L  G+
Sbjct:   505 LVGCKWGEWLRCGI 518

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=IEA

FB|FBgn0052201 CG32201 [Drosophila melanogaster (taxid:7227)]

 Score = 170 (64.9 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
 Identities = 30/67 (44%), Positives = 45/67 (67%)

Query:    61 LGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCP 120
             LG++   +L    ++V  GGAT+FP +N+TVFP+KGS ++W+N H +   D R  HS CP
Sbjct:   436 LGDRLASILFYA-SEVPQGGATVFPEINVTVFPQKGSMLYWFNLHDDGKPDIRSLHSVCP 494

Query:   121 VALGNKW 127
             V  G++W
Sbjct:   495 VLNGDRW 501

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=ISS

GO:0016222 "procollagen-proline 4-dioxygenase complex" evidence=ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

FB|FBgn0051014 PH4alphaSG1 "prolyl-4-hydroxylase-alpha SG1" [Drosophila melanogaster (taxid:7227)]

 Score = 177 (67.4 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 36/67 (53%), Positives = 43/67 (64%)

Query:    65 W-GKLLLSGL---TDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCP 120
             W G  LL+ L    DV LGGAT FP L L V P KGS + WYN H++T  D+R  H+GCP
Sbjct:   442 WKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCP 501

Query:   121 VALGNKW 127
             V  G+KW
Sbjct:   502 VLQGSKW 508

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0016222 "procollagen-proline 4-dioxygenase complex" evidence=IC

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0007435 "salivary gland morphogenesis" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

FB|FBgn0051524 CG31524 [Drosophila melanogaster (taxid:7227)]

 Score = 176 (67.0 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 30/55 (54%), Positives = 38/55 (69%)

Query:    73 LTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
             L DV  GGAT FP LN+TVFP+ G+ + WYN H   +L  R  H+GCPV +G+KW
Sbjct:   447 LNDVPQGGATHFPGLNITVFPKFGTVLMWYNLHTEGMLHVRTMHTGCPVIVGSKW 501

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

FB|FBgn0051015 PH4alphaPV "prolyl-4-hydroxylase-alpha PV" [Drosophila melanogaster (taxid:7227)]

 Score = 174 (66.3 bits), Expect = 2.3e-12, P = 2.3e-12
 Identities = 29/55 (52%), Positives = 39/55 (70%)

Query:    73 LTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
             LTDVE GGAT+FP++   VFP++GS V WYN   N  +D +  H+ CPV +G+KW
Sbjct:   449 LTDVEQGGATVFPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKW 503

GO:0016222 "procollagen-proline 4-dioxygenase complex" evidence=IC

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|E2RLA2 P4HA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 174 (66.3 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 32/66 (48%), Positives = 44/66 (66%)

Query:    62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
             GN+    L   ++DV  GGAT+FP +  +V+P+KG+AVFWYN  A+   DY   H+ CPV
Sbjct:   447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505

Query:   122 ALGNKW 127
              +GNKW
Sbjct:   506 LVGNKW 511

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=IEA

UNIPROTKB|E2RLB8 P4HA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 174 (66.3 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 32/66 (48%), Positives = 44/66 (66%)

Query:    62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
             GN+    L   ++DV  GGAT+FP +  +V+P+KG+AVFWYN  A+   DY   H+ CPV
Sbjct:   447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505

Query:   122 ALGNKW 127
              +GNKW
Sbjct:   506 LVGNKW 511

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

UNIPROTKB|P13674 P4HA1 "Prolyl 4-hydroxylase subunit alpha-1" [Homo sapiens (taxid:9606)]

 Score = 174 (66.3 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 32/66 (48%), Positives = 44/66 (66%)

Query:    62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
             GN+    L   ++DV  GGAT+FP +  +V+P+KG+AVFWYN  A+   DY   H+ CPV
Sbjct:   447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505

Query:   122 ALGNKW 127
              +GNKW
Sbjct:   506 LVGNKW 511

GO:0005506 "iron ion binding" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=IEA

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|A1X898 P4HA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 174 (66.3 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 32/66 (48%), Positives = 44/66 (66%)

Query:    62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
             GN+    L   ++DV  GGAT+FP +  +V+P+KG+AVFWYN  A+   DY   H+ CPV
Sbjct:   447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505

Query:   122 ALGNKW 127
              +GNKW
Sbjct:   506 LVGNKW 511

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0005581 "collagen" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	136
smart00702	165	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subun	5e-12
smart00702	165	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subun	4e-11
PLN00052	310	PLN00052, PLN00052, prolyl 4-hydroxylase; Provisio	1e-05
PLN00052	310	PLN00052, PLN00052, prolyl 4-hydroxylase; Provisio	2e-04

>gnl|CDD|214780 smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues

 Score = 59.3 bits (144), Expect = 5e-12
 Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 10/59 (16%)

Query: 73  LTDVELGGATIFPSLNL----TVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
           L DVE GG  +FP L L    TV P+KG  +F+ + H       R  H  CPV  G++W
Sbjct: 106 LNDVEEGGELVFPGLRLMVVATVKPKKGDLLFFPSGHG------RSLHGVCPVTRGSRW 158

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor. Length = 165

>gnl|CDD|214780 smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues

 Score = 57.0 bits (138), Expect = 4e-11
 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 10/59 (16%)

Query: 11  LTDVELGGATIFPSLNL----TVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKW 65
           L DVE GG  +FP L L    TV P+KG  +F+ + H  +L      H  CPV  G++W
Sbjct: 106 LNDVEEGGELVFPGLRLMVVATVKPKKGDLLFFPSGHGRSL------HGVCPVTRGSRW 158

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor. Length = 165

>gnl|CDD|177683 PLN00052, PLN00052, prolyl 4-hydroxylase; Provisional

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 20/98 (20%)

Query: 48  LDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLN------------------L 89
            DY  +H     ALG      +L  L+ V+ GG T+FP+                    L
Sbjct: 149 FDY--FHDKINQALGGHRYATVLMYLSTVDKGGETVFPNAEGWENQPKDDTFSECAHKGL 206

Query: 90  TVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
            V P KG AV +++ H + + D    H  CPV  G KW
Sbjct: 207 AVKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGEKW 244

Length = 310

>gnl|CDD|177683 PLN00052, PLN00052, prolyl 4-hydroxylase; Provisional

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 18/73 (24%)

Query: 11  LTDVELGGATIFPSLN------------------LTVFPEKGSAVFWHNAHANTLLDYWM 52
           L+ V+ GG T+FP+                    L V P KG AV + + H + + D   
Sbjct: 172 LSTVDKGGETVFPNAEGWENQPKDDTFSECAHKGLAVKPVKGDAVLFFSLHIDGVPDPLS 231

Query: 53  YHSGCPVALGNKW 65
            H  CPV  G KW
Sbjct: 232 LHGSCPVIEGEKW 244

Length = 310

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
PLN00052	310	prolyl 4-hydroxylase; Provisional	99.96
KOG1591|consensus	289		99.95
PLN00052	310	prolyl 4-hydroxylase; Provisional	99.84
KOG1591|consensus	289		99.81
smart00702	178	P4Hc Prolyl 4-hydroxylase alpha subunit homologues	99.76
smart00702	178	P4Hc Prolyl 4-hydroxylase alpha subunit homologues	99.47
PRK05467	226	Fe(II)-dependent oxygenase superfamily protein; Pr	99.45
PF13640	100	2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily;	98.93
PRK05467	226	Fe(II)-dependent oxygenase superfamily protein; Pr	98.84
PHA02869	418	C4L/C10L-like gene family protein; Provisional	98.78
PHA02813	354	hypothetical protein; Provisional	98.63
PF13640	100	2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily;	98.26
PHA02813	354	hypothetical protein; Provisional	97.66
PHA02869	418	C4L/C10L-like gene family protein; Provisional	97.63
COG3128	229	PiuC Uncharacterized iron-regulated protein [Funct	96.46
PF03171	98	2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent	95.54
COG3128	229	PiuC Uncharacterized iron-regulated protein [Funct	95.08
PF13661	70	2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily	94.75
PF12851	171	Tet_JBP: Oxygenase domain of the 2OGFeDO superfami	94.21
KOG3710|consensus	280		93.99
PF03336	339	Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR	93.92
PF09859	173	Oxygenase-NA: Oxygenase, catalysing oxidative meth	93.84
PF13759	101	2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB	93.8
PHA02866	333	Hypothetical protein; Provisional	93.35
TIGR02466	201	conserved hypothetical protein. This family consis	92.96
PF09859	173	Oxygenase-NA: Oxygenase, catalysing oxidative meth	92.47
PHA02923	315	hypothetical protein; Provisional	91.63
PF13661	70	2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily	90.25
PF03171	98	2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent	88.9
KOG3710|consensus	280		87.33
TIGR02408	277	ectoine_ThpD ectoine hydroxylase. Both ectoine and	82.89

>PLN00052 prolyl 4-hydroxylase; Provisional

Probab=99.96  E-value=2.4e-30  Score=207.14  Aligned_cols=93  Identities=29%  Similarity=0.545  Sum_probs=84.1

Q ss_pred             ecccCccccccccCcCCccccCcccceeeeeccccccccCcccCCCC------------------ceEEecccCeEEEEE
Q psy6258          41 NAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSL------------------NLTVFPEKGSAVFWY  102 (136)
Q Consensus        41 n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLnd~~~GG~t~Fp~~------------------~~~v~p~~G~al~~~  102 (136)
                      +++|+.|.|++..-. .....|+|++|+++ ||||+++||+|+||++                  +++|+|+||+||+|+
T Consensus       142 Gq~Y~~H~D~~~~~~-~~~~gg~R~aTvL~-YLndv~~GGeT~FP~~~~~~~~~~~~~~s~c~~~gl~VkPkkG~ALlF~  219 (310)
T PLN00052        142 GQKYEPHFDYFHDKI-NQALGGHRYATVLM-YLSTVDKGGETVFPNAEGWENQPKDDTFSECAHKGLAVKPVKGDAVLFF  219 (310)
T ss_pred             CCCCCCCCCcccccc-ccccCCceeEEEEE-EeccCCCCCceecCCcccccccccccchhhhhcCCeEeccCcceEEEEe
Confidence            678999999976421 12357899999999 9999999999999998                  799999999999999


Q ss_pred             ecCCCCCCCccceeccCccccCcEEEEEecccc
Q psy6258         103 NAHANTLLDYRMYHSGCPVALGNKWGKLLLSGV  135 (136)
Q Consensus       103 ~~~~~~~~d~~~~H~~~pv~~G~K~~~~~w~~~  135 (136)
                      |+++||..|++|+|+||||++|+||++|+|+.+
T Consensus       220 nl~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~  252 (310)
T PLN00052        220 SLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHI  252 (310)
T ss_pred             ccCCCCCCCcccccCCCeeecCeEEEEEEeeec
Confidence            999999999999999999999999999999964

>KOG1591|consensus

Probab=99.95  E-value=8.3e-29  Score=196.39  Aligned_cols=94  Identities=37%  Similarity=0.669  Sum_probs=86.1

Q ss_pred             ecccCcccccccc---CcCCccccCcccceeeeeccccccccCcccCCCCce--EEecccCeEEEEEecCCCCCCCccce
Q psy6258          41 NAHANTLLDYWMY---HSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNL--TVFPEKGSAVFWYNAHANTLLDYRMY  115 (136)
Q Consensus        41 n~~~~~h~D~~s~---H~~~pv~~G~R~aT~l~~yLnd~~~GG~t~Fp~~~~--~v~p~~G~al~~~~~~~~~~~d~~~~  115 (136)
                      +++|+.|.||+..   +...-...|+|++|+++ ||+++++||+|+||.++.  +|+|+||+|++|+|+++|+..|++|.
T Consensus       186 Gg~Y~~H~D~~~~~~~~~~~~~~~g~RiaT~l~-yls~v~~GG~TvFP~~~~~~~V~PkkGdal~wfnl~~~~~~d~~S~  264 (289)
T KOG1591|consen  186 GGHYEPHYDYFLPEEDETFNGLNGGNRIATVLM-YLSDVEQGGETVFPNLGMKPAVKPKKGDALFWFNLHPDGEGDPRSL  264 (289)
T ss_pred             CccccccccccccccchhhhhcccCCcceeEEE-EecccCCCCcccCCCCCCcccccCCCCCeeEEEEccCCCCCCcccc
Confidence            6899999999864   11222368999999999 999999999999999999  99999999999999999999999999


Q ss_pred             eccCccccCcEEEEEecccc
Q psy6258         116 HSGCPVALGNKWGKLLLSGV  135 (136)
Q Consensus       116 H~~~pv~~G~K~~~~~w~~~  135 (136)
                      |++|||+.|+||++|+|+.+
T Consensus       265 H~~CPv~~G~kw~~~~wi~~  284 (289)
T KOG1591|consen  265 HGGCPVLVGSKWIATKWIHE  284 (289)
T ss_pred             ccCCCeeeccceeeeeeeee
Confidence            99999999999999999975

>PLN00052 prolyl 4-hydroxylase; Provisional

Probab=99.84  E-value=1.7e-21  Score=156.21  Aligned_cols=75  Identities=32%  Similarity=0.548  Sum_probs=68.6

Q ss_pred             ccceEEeeeecCCCCCCeeecCCC------------------CceecccccceeEeeecccCccccccccCcCCccccCc
Q psy6258           2 NRAEMSSVELTDVELGGATIFPSL------------------NLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGN   63 (136)
Q Consensus         2 ~R~~T~~iyLnd~~~GG~T~Fp~l------------------~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~   63 (136)
                      ||++|+++||||+++||+|.||++                  +++|+|+||+||+|+|.+.++..|..++|++|||..|.
T Consensus       163 ~R~aTvL~YLndv~~GGeT~FP~~~~~~~~~~~~~~s~c~~~gl~VkPkkG~ALlF~nl~~dG~~D~~SlHagcPVi~G~  242 (310)
T PLN00052        163 HRYATVLMYLSTVDKGGETVFPNAEGWENQPKDDTFSECAHKGLAVKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGE  242 (310)
T ss_pred             ceeEEEEEEeccCCCCCceecCCcccccccccccchhhhhcCCeEeccCcceEEEEeccCCCCCCCcccccCCCeeecCe
Confidence            799999999999999999999998                  69999999999999999999999999999999999999


Q ss_pred             ccceeeeeccccc
Q psy6258          64 KWGKLLLSGLTDV   76 (136)
Q Consensus        64 R~aT~l~~yLnd~   76 (136)
                      ||+...|++.+..
T Consensus       243 Kw~atkWi~~~~~  255 (310)
T PLN00052        243 KWSAPKWIHIRSY  255 (310)
T ss_pred             EEEEEEeeecccc
Confidence            9977666355443

>KOG1591|consensus

Probab=99.81  E-value=2.3e-20  Score=148.20  Aligned_cols=74  Identities=41%  Similarity=0.698  Sum_probs=68.9

Q ss_pred             ccceEEeeeecCCCCCCeeecCCCCc--eecccccceeEeeecccCccccccccCcCCccccCcccceeeeecccc
Q psy6258           2 NRAEMSSVELTDVELGGATIFPSLNL--TVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTD   75 (136)
Q Consensus         2 ~R~~T~~iyLnd~~~GG~T~Fp~l~l--~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLnd   75 (136)
                      ||+||+++||+|+++||+|+||.+++  +|+|+||+|++|+|.+.++..|.+|.|++||+..|+||..+.|++.++
T Consensus       211 ~RiaT~l~yls~v~~GG~TvFP~~~~~~~V~PkkGdal~wfnl~~~~~~d~~S~H~~CPv~~G~kw~~~~wi~~~~  286 (289)
T KOG1591|consen  211 NRIATVLMYLSDVEQGGETVFPNLGMKPAVKPKKGDALFWFNLHPDGEGDPRSLHGGCPVLVGSKWIATKWIHEKN  286 (289)
T ss_pred             CcceeEEEEecccCCCCcccCCCCCCcccccCCCCCeeEEEEccCCCCCCccccccCCCeeeccceeeeeeeeecc
Confidence            79999999999999999999999999  999999999999999999999999999999999999987766636543

>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues

Probab=99.76  E-value=9.3e-19  Score=129.25  Aligned_cols=81  Identities=35%  Similarity=0.581  Sum_probs=67.9

Q ss_pred             cccCccccccccCcCCccccCcccceeeeeccccccccCcccCCCCce----EEecccCeEEEEEecCCCCCCCccceec
Q psy6258          42 AHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNL----TVFPEKGSAVFWYNAHANTLLDYRMYHS  117 (136)
Q Consensus        42 ~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLnd~~~GG~t~Fp~~~~----~v~p~~G~al~~~~~~~~~~~d~~~~H~  117 (136)
                      +++..|.|.....     ..++|.+|+++ |||++++||+|.||..+.    +|+|++|++|+|++..      .++.|+
T Consensus        94 ~~~~~H~D~~~~~-----~~~~r~~T~~~-yLn~~~~GG~~~f~~~~~~~~~~v~P~~G~~v~f~~~~------~~~~H~  161 (178)
T smart00702       94 GHYGPHVDNFEDD-----ENGDRIATFLL-YLNDVEEGGELVFPGLGLMVCATVKPKKGDLLFFPSGR------GRSLHG  161 (178)
T ss_pred             CcccCcCCCCCCC-----CCCCeEEEEEE-EeccCCcCceEEecCCCCccceEEeCCCCcEEEEeCCC------CCcccc
Confidence            4445555553322     12689999999 999999999999999988    9999999999999853      389999


Q ss_pred             cCccccCcEEEEEeccc
Q psy6258         118 GCPVALGNKWGKLLLSG  134 (136)
Q Consensus       118 ~~pv~~G~K~~~~~w~~  134 (136)
                      +|||.+|+||++++|+.
T Consensus       162 v~pv~~G~r~~~~~W~~  178 (178)
T smart00702      162 VCPVTRGSRWAITGWIR  178 (178)
T ss_pred             CCcceeCCEEEEEEEEC
Confidence            99999999999999974

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.

>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues

Probab=99.47  E-value=6.8e-14  Score=103.20  Aligned_cols=63  Identities=37%  Similarity=0.652  Sum_probs=57.9

Q ss_pred             ccceEEeeeecCCCCCCeeecCCCCc----eecccccceeEeeecccCccccccccCcCCccccCcccceeee
Q psy6258           2 NRAEMSSVELTDVELGGATIFPSLNL----TVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLL   70 (136)
Q Consensus         2 ~R~~T~~iyLnd~~~GG~T~Fp~l~l----~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~   70 (136)
                      +|.+|+++||||++.||+|.||..+.    +|+|++|++++|++.+.      .+.|++||+.+|.|++...|
T Consensus       110 ~r~~T~~~yLn~~~~GG~~~f~~~~~~~~~~v~P~~G~~v~f~~~~~------~~~H~v~pv~~G~r~~~~~W  176 (178)
T smart00702      110 DRIATFLLYLNDVEEGGELVFPGLGLMVCATVKPKKGDLLFFPSGRG------RSLHGVCPVTRGSRWAITGW  176 (178)
T ss_pred             CeEEEEEEEeccCCcCceEEecCCCCccceEEeCCCCcEEEEeCCCC------CccccCCcceeCCEEEEEEE
Confidence            79999999999999999999999988    99999999999997632      67999999999999988777

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.

>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional

Probab=99.45  E-value=1.6e-13  Score=105.96  Aligned_cols=83  Identities=16%  Similarity=0.072  Sum_probs=63.1

Q ss_pred             ecccCccccccccCcCCccccC-cccceeeeecccccc--ccCcccCCCC--ceEEecccCeEEEEEecCCCCCCCccce
Q psy6258          41 NAHANTLLDYWMYHSGCPVALG-NKWGKLLLSGLTDVE--LGGATIFPSL--NLTVFPEKGSAVFWYNAHANTLLDYRMY  115 (136)
Q Consensus        41 n~~~~~h~D~~s~H~~~pv~~G-~R~aT~l~~yLnd~~--~GG~t~Fp~~--~~~v~p~~G~al~~~~~~~~~~~d~~~~  115 (136)
                      ++++..|.|.......- ...+ .+..|+.+ |||+++  +||||.|+..  ..+|+|++|++|+|++         .++
T Consensus        90 G~~y~~H~D~~~~~~~~-~~~~~rs~lS~~l-yLnd~~~yeGGEl~~~~~~g~~~Vkp~aG~~vlfps---------~~l  158 (226)
T PRK05467         90 GMSYGFHVDNAVRSLPG-TGGRVRTDLSATL-FLSDPDDYDGGELVIEDTYGEHRVKLPAGDLVLYPS---------TSL  158 (226)
T ss_pred             CCccCccccCCcccCCC-CCcceeEEEEEEE-EeCCCCCCcCCceEEecCCCcEEEecCCCeEEEECC---------CCc
Confidence            45566666664332100 0011 23578888 999876  7999999864  5899999999999997         599


Q ss_pred             eccCccccCcEEEEEeccc
Q psy6258         116 HSGCPVALGNKWGKLLLSG  134 (136)
Q Consensus       116 H~~~pv~~G~K~~~~~w~~  134 (136)
                      |+++||.+|+||+++.|+.
T Consensus       159 H~v~pVt~G~R~~~~~Wi~  177 (226)
T PRK05467        159 HRVTPVTRGVRVASFFWIQ  177 (226)
T ss_pred             eeeeeccCccEEEEEecHH
Confidence            9999999999999999985

>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A

Probab=98.93  E-value=1.2e-09  Score=73.17  Aligned_cols=74  Identities=24%  Similarity=0.290  Sum_probs=54.9

Q ss_pred             ccccCcCCccccCcccceeeeecccccc---ccCcccCCC------CceEEe-----cccCeEEEEEecCCCCCCCccce
Q psy6258          50 YWMYHSGCPVALGNKWGKLLLSGLTDVE---LGGATIFPS------LNLTVF-----PEKGSAVFWYNAHANTLLDYRMY  115 (136)
Q Consensus        50 ~~s~H~~~pv~~G~R~aT~l~~yLnd~~---~GG~t~Fp~------~~~~v~-----p~~G~al~~~~~~~~~~~d~~~~  115 (136)
                      +...|.+... ...+..|.++ |||+.+   +||+|.|..      ....+.     |+.|++++|.+        .+++
T Consensus        11 ~~~~H~D~~~-~~~~~~t~ll-yL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F~~--------~~~~   80 (100)
T PF13640_consen   11 FFGPHTDNSY-DPHRRVTLLL-YLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIFPS--------DNSL   80 (100)
T ss_dssp             EEEEEESSSC-CCSEEEEEEE-ESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEEES--------CTCE
T ss_pred             EEeeeECCCC-CCcceEEEEE-EECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEEeC--------CCCe
Confidence            3344544321 4567889999 999887   999999985      234555     99999999987        4799


Q ss_pred             eccCcc-ccCcEEEEEecc
Q psy6258         116 HSGCPV-ALGNKWGKLLLS  133 (136)
Q Consensus       116 H~~~pv-~~G~K~~~~~w~  133 (136)
                      |+..|| ..|.+++++.|+
T Consensus        81 H~v~~v~~~~~R~~l~~~~   99 (100)
T PF13640_consen   81 HGVTPVGEGGRRYSLTFWF   99 (100)
T ss_dssp             EEEEEE-EESEEEEEEEEE
T ss_pred             ecCcccCCCCCEEEEEEEE
Confidence            999999 889999999997

...

>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional

Probab=98.84  E-value=3.1e-09  Score=82.14  Aligned_cols=60  Identities=18%  Similarity=0.267  Sum_probs=52.9

Q ss_pred             ccceEEeeeecCCC--CCCeeecCCC--CceecccccceeEeeecccCccccccccCcCCccccCcccceeee
Q psy6258           2 NRAEMSSVELTDVE--LGGATIFPSL--NLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLL   70 (136)
Q Consensus         2 ~R~~T~~iyLnd~~--~GG~T~Fp~l--~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~   70 (136)
                      +|..|+++||||++  +||+|.|+..  ..+|+|++|++++|++.         ++|.++||..|.|++.+.|
T Consensus       112 rs~lS~~lyLnd~~~yeGGEl~~~~~~g~~~Vkp~aG~~vlfps~---------~lH~v~pVt~G~R~~~~~W  175 (226)
T PRK05467        112 RTDLSATLFLSDPDDYDGGELVIEDTYGEHRVKLPAGDLVLYPST---------SLHRVTPVTRGVRVASFFW  175 (226)
T ss_pred             eEEEEEEEEeCCCCCCcCCceEEecCCCcEEEecCCCeEEEECCC---------CceeeeeccCccEEEEEec
Confidence            45788999999876  6999999865  48999999999999863         6899999999999999887

>PHA02869 C4L/C10L-like gene family protein; Provisional

Probab=98.78  E-value=7.4e-09  Score=85.17  Aligned_cols=71  Identities=28%  Similarity=0.286  Sum_probs=56.4

Q ss_pred             cccccCcC-CccccCcc-cceeeeeccccccccCcccCCC-CceEEecccCeEEEEEecCCCCCCCccceeccCccccCc
Q psy6258          49 DYWMYHSG-CPVALGNK-WGKLLLSGLTDVELGGATIFPS-LNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN  125 (136)
Q Consensus        49 D~~s~H~~-~pv~~G~R-~aT~l~~yLnd~~~GG~t~Fp~-~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G~  125 (136)
                      |++..|.+ +....+++ ..|+++ |||++++||+|.|.. -..+|+|++|  |+|.         ....|.|++|.+|.
T Consensus       114 q~F~~H~Dg~~~rs~e~s~~tLLL-YLNd~~~GGET~f~~~~~~sI~pksg--LLFd---------h~l~Heg~~V~sG~  181 (418)
T PHA02869        114 DYFARHRDFSTVFSKNIICVHLLL-YLEQPETGGETVIYIDNNTSVKLKTD--HLFD---------KTIEHESITVESGR  181 (418)
T ss_pred             CcccccccCceecCCCEEEEEEEE-EEeccCCCCceEEEeCCCceEecCCC--eEec---------cccccCCcEeecCe
Confidence            45555532 33344565 578899 999999999999986 5688999999  7775         58999999999999


Q ss_pred             EEEEEe
Q psy6258         126 KWGKLL  131 (136)
Q Consensus       126 K~~~~~  131 (136)
                      |+|+..
T Consensus       182 KyVart  187 (418)
T PHA02869        182 KCVALF  187 (418)
T ss_pred             EEEEEE
Confidence            999863

>PHA02813 hypothetical protein; Provisional

Probab=98.63  E-value=3.3e-08  Score=80.23  Aligned_cols=55  Identities=22%  Similarity=0.147  Sum_probs=47.6

Q ss_pred             ccceeeeeccccccccCcccCCCCc-eEEecccCeEEEEEecCCCCCCCccceeccCccccCcEEEEE
Q psy6258          64 KWGKLLLSGLTDVELGGATIFPSLN-LTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKL  130 (136)
Q Consensus        64 R~aT~l~~yLnd~~~GG~t~Fp~~~-~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G~K~~~~  130 (136)
                      ...|+++ |||++++||+|.|..-+ -+|+  .|++|+|.         ....|.|+||.+|.|+|+-
T Consensus       122 s~~tLLL-YLN~~~~GGeT~f~~~~~tsI~--~g~dlLFd---------h~l~Heg~~V~sG~KyVa~  177 (354)
T PHA02813        122 YCYHLVL-YLNNTSKGGNTNIHIKDNTIFS--TKNDVLFD---------KTLNHSSDIITDGEKNIAL  177 (354)
T ss_pred             eEEEEEE-EEeccCCCCceEEEcCCCceEe--ecceEEEe---------cccccCCcEeccCeEEEEE
Confidence            5678999 99999999999998652 3455  99999996         4899999999999999875

>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A

Probab=98.26  E-value=9.7e-07  Score=58.95  Aligned_cols=61  Identities=25%  Similarity=0.296  Sum_probs=45.2

Q ss_pred             ccceEEeeeecCCC---CCCeeecCC------CCceec-----ccccceeEeeecccCccccccccCcCCcc-ccCcccc
Q psy6258           2 NRAEMSSVELTDVE---LGGATIFPS------LNLTVF-----PEKGSAVFWHNAHANTLLDYWMYHSGCPV-ALGNKWG   66 (136)
Q Consensus         2 ~R~~T~~iyLnd~~---~GG~T~Fp~------l~l~v~-----p~kG~al~~~n~~~~~h~D~~s~H~~~pv-~~G~R~a   66 (136)
                      .|..|+++|||+.+   .||+|.|..      ....+.     |+.|++++|.+        ..+.|+..|+ ..+.|++
T Consensus        23 ~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F~~--------~~~~H~v~~v~~~~~R~~   94 (100)
T PF13640_consen   23 HRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIFPS--------DNSLHGVTPVGEGGRRYS   94 (100)
T ss_dssp             SEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEEES--------CTCEEEEEEE-EESEEEE
T ss_pred             cceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEEeC--------CCCeecCcccCCCCCEEE
Confidence            57899999999887   899999885      234444     99999999987        1469999999 7888877


Q ss_pred             eeee
Q psy6258          67 KLLL   70 (136)
Q Consensus        67 T~l~   70 (136)
                      ...|
T Consensus        95 l~~~   98 (100)
T PF13640_consen   95 LTFW   98 (100)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6665

...

>PHA02813 hypothetical protein; Provisional

Probab=97.66  E-value=5.5e-05  Score=61.68  Aligned_cols=52  Identities=17%  Similarity=0.090  Sum_probs=42.1

Q ss_pred             eEEeeeecCCCCCCeeecCCCCc-eecccccceeEeeecccCccccccccCcCCccccCcccce
Q psy6258           5 EMSSVELTDVELGGATIFPSLNL-TVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGK   67 (136)
Q Consensus         5 ~T~~iyLnd~~~GG~T~Fp~l~l-~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT   67 (136)
                      .|+++|||++++||+|.|..-+. ++.  .|++++|..         ...|.+++|.+|.|++.
T Consensus       124 ~tLLLYLN~~~~GGeT~f~~~~~tsI~--~g~dlLFdh---------~l~Heg~~V~sG~KyVa  176 (354)
T PHA02813        124 YHLVLYLNNTSKGGNTNIHIKDNTIFS--TKNDVLFDK---------TLNHSSDIITDGEKNIA  176 (354)
T ss_pred             EEEEEEEeccCCCCceEEEcCCCceEe--ecceEEEec---------ccccCCcEeccCeEEEE
Confidence            58999999999999999987633 343  889998843         45899999999999644

>PHA02869 C4L/C10L-like gene family protein; Provisional

Probab=97.63  E-value=6.3e-05  Score=62.31  Aligned_cols=50  Identities=22%  Similarity=0.177  Sum_probs=42.1

Q ss_pred             eEEeeeecCCCCCCeeecCC-CCceecccccceeEeeecccCccccccccCcCCccccCccc
Q psy6258           5 EMSSVELTDVELGGATIFPS-LNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKW   65 (136)
Q Consensus         5 ~T~~iyLnd~~~GG~T~Fp~-l~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~   65 (136)
                      .|+++|||++++||+|.|.. -+.+|.|++|  ++|.         ....|.+++|.+|.|+
T Consensus       133 ~tLLLYLNd~~~GGET~f~~~~~~sI~pksg--LLFd---------h~l~Heg~~V~sG~Ky  183 (418)
T PHA02869        133 VHLLLYLEQPETGGETVIYIDNNTSVKLKTD--HLFD---------KTIEHESITVESGRKC  183 (418)
T ss_pred             EEEEEEEeccCCCCceEEEeCCCceEecCCC--eEec---------cccccCCcEeecCeEE
Confidence            48999999999999999987 4688999999  6653         2458999999999994

>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]

Probab=96.46  E-value=0.0071  Score=45.87  Aligned_cols=54  Identities=24%  Similarity=0.310  Sum_probs=47.5

Q ss_pred             cccccc--ccCcccCCC--CceEEecccCeEEEEEecCCCCCCCccceeccCccccCcEEEEEeccc
Q psy6258          72 GLTDVE--LGGATIFPS--LNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLSG  134 (136)
Q Consensus        72 yLnd~~--~GG~t~Fp~--~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G~K~~~~~w~~  134 (136)
                      +++|++  .||+-+.-+  -+..||=..|++++|++         .|+|...||..|+.+..-.|+.
T Consensus       123 fl~DPedYdGGeLVv~dtYg~h~VklPAGdLVlypS---------tSlH~VtPVTRg~R~asffW~q  180 (229)
T COG3128         123 FLSDPEDYDGGELVVNDTYGNHRVKLPAGDLVLYPS---------TSLHEVTPVTRGERFASFFWIQ  180 (229)
T ss_pred             ecCCccccCCceEEEeccccceEEeccCCCEEEccc---------ccceeccccccCceEEEeeehH
Confidence            688887  699988844  47889988999999987         6999999999999999999985

>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit

Probab=95.54  E-value=0.017  Score=38.08  Aligned_cols=67  Identities=13%  Similarity=0.117  Sum_probs=38.1

Q ss_pred             cccceeeeeccccccccCcccCCCCc--eEEecccCeEEE-EEecC--CCCCCCccceeccCccccCcEEEEEeccc
Q psy6258          63 NKWGKLLLSGLTDVELGGATIFPSLN--LTVFPEKGSAVF-WYNAH--ANTLLDYRMYHSGCPVALGNKWGKLLLSG  134 (136)
Q Consensus        63 ~R~aT~l~~yLnd~~~GG~t~Fp~~~--~~v~p~~G~al~-~~~~~--~~~~~d~~~~H~~~pv~~G~K~~~~~w~~  134 (136)
                      ++++|+++ +    +.+|+..|...+  +.|.|..+..++ +.+..  -.+.....+.|..||+.+|.++.++.|++
T Consensus        26 ~~~~Til~-~----~~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~HrV~~~~~~~R~s~~~f~~   97 (98)
T PF03171_consen   26 DGLLTILF-Q----DEVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPATLHRVVPPTEGERYSLTFFLR   97 (98)
T ss_dssp             -SSEEEEE-E----TSTS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS----EEEE--STS-EEEEEEEEE
T ss_pred             CCeEEEEe-c----ccchheeccccccccCccCccceeeeeceeeeecccCCccCCceeeeEcCCCCCEEEEEEEEC
Confidence            46788887 5    777888887663  666666664433 33311  24566789999999999999999999974

The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....

>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]

Probab=95.08  E-value=0.034  Score=42.24  Aligned_cols=58  Identities=22%  Similarity=0.339  Sum_probs=47.9

Q ss_pred             EeeeecCCCC--CCeeecCCC--CceecccccceeEeeecccCccccccccCcCCccccCcccceeeeeccc
Q psy6258           7 SSVELTDVEL--GGATIFPSL--NLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLT   74 (136)
Q Consensus         7 ~~iyLnd~~~--GG~T~Fp~l--~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLn   74 (136)
                      +-++|+|++.  ||+-+....  +..|+-..|+.++|++.         ++|.-.||..|.|++.++| |-.
T Consensus       120 ~tlfl~DPedYdGGeLVv~dtYg~h~VklPAGdLVlypSt---------SlH~VtPVTRg~R~asffW-~qs  181 (229)
T COG3128         120 CTLFLSDPEDYDGGELVVNDTYGNHRVKLPAGDLVLYPST---------SLHEVTPVTRGERFASFFW-IQS  181 (229)
T ss_pred             eeeecCCccccCCceEEEeccccceEEeccCCCEEEcccc---------cceeccccccCceEEEeee-hHH
Confidence            5678999875  999876654  67788788999999863         6898899999999999999 743

>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily

Probab=94.75  E-value=0.029  Score=35.37  Aligned_cols=23  Identities=22%  Similarity=0.145  Sum_probs=18.5

Q ss_pred             ccceEEeeeec----CCCCCCeeecCC
Q psy6258           2 NRAEMSSVELT----DVELGGATIFPS   24 (136)
Q Consensus         2 ~R~~T~~iyLn----d~~~GG~T~Fp~   24 (136)
                      +|..|++||||    +...||++.|+.
T Consensus        38 ~r~~t~llYLn~~w~~d~~Gg~~~f~~   64 (70)
T PF13661_consen   38 RRFLTLLLYLNEDWDEDFGGGELFFDD   64 (70)
T ss_pred             ceeEEEEEEecccccCccCCcEEEEeC
Confidence            68899999999    455588888865

>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []

Probab=94.21  E-value=0.16  Score=37.59  Aligned_cols=56  Identities=21%  Similarity=0.252  Sum_probs=44.2

Q ss_pred             cceeeeecccc-ccccCcccCCC-----CceEEecccCeEEEEEecCCCCCCCccceeccCcccc-----CcEEEE
Q psy6258          65 WGKLLLSGLTD-VELGGATIFPS-----LNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL-----GNKWGK  129 (136)
Q Consensus        65 ~aT~l~~yLnd-~~~GG~t~Fp~-----~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~-----G~K~~~  129 (136)
                      ..++++ -+.. ...||.-++|.     +|++|.|..|++|++-.        ....|+-.||..     |+.+.+
T Consensus        99 ~~~~~~-t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~--------~~~~Hgvtpv~~~~~~~~~R~sl  165 (171)
T PF12851_consen   99 GYDVLC-TLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCA--------KRELHGVTPVESPNRNHGTRISL  165 (171)
T ss_pred             CeEEEE-ecCCccccCceEeccccccccCCEEEecCCCcEEEEcc--------cceeeecCcccCCCCCCCeEEEE
Confidence            345555 4433 37899999999     99999999999999865        469999999997     666654

Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.

>KOG3710|consensus

Probab=93.99  E-value=0.15  Score=39.93  Aligned_cols=63  Identities=19%  Similarity=0.231  Sum_probs=49.3

Q ss_pred             cccceeeeecccc---cc--ccCcccCCCCc---eEEecccCeEEEEEecCCCCCCCccceeccCccccCcEEEEEeccc
Q psy6258          63 NKWGKLLLSGLTD---VE--LGGATIFPSLN---LTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLSG  134 (136)
Q Consensus        63 ~R~aT~l~~yLnd---~~--~GG~t~Fp~~~---~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G~K~~~~~w~~  134 (136)
                      -|.+|.+. |||.   +.  -|+--.||.-.   ..|.|+-+..|||++       |.+--|...|+. -.+|.++.|..
T Consensus       168 GRcITcIY-YlNqNWD~kv~Gg~Lri~pe~~~~~adieP~fdrLlffwS-------drrnPhev~Pa~-~tryaitvwyf  238 (280)
T KOG3710|consen  168 GRCITCIY-YLNQNWDVKVHGGILRIFPEGSTTFADIEPKFDRLLFFWS-------DRRNPHEVQPAY-ATRYAITVWYF  238 (280)
T ss_pred             ceEEEEEE-EcccCcceeeccceeEeccCCCCcccccCcCCCeEEEEEe-------cCCCcccccccc-ccceEEEEEEe
Confidence            36788888 9996   22  35555777753   568899999999998       678889999999 46899999974

>PF03336 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR005004 This is a family of proteins expressed by members of the Poxviridae

Probab=93.92  E-value=0.055  Score=44.26  Aligned_cols=70  Identities=24%  Similarity=0.210  Sum_probs=46.1

Q ss_pred             cccccCcCC-ccccC-cccceeeeeccccccccCcccCC---CCceEEecccCeEEEEEecCCCCCCCccceeccCcccc
Q psy6258          49 DYWMYHSGC-PVALG-NKWGKLLLSGLTDVELGGATIFP---SLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL  123 (136)
Q Consensus        49 D~~s~H~~~-pv~~G-~R~aT~l~~yLnd~~~GG~t~Fp---~~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~  123 (136)
                      |++..|... ..... ..-.++++ ||+.++.||+|.+-   .-.--+++  .+-++|         |....|.+.+|.+
T Consensus        90 d~f~~~~d~~~~~~~n~~~y~LvL-yL~~~~~GGktkiyi~~~~~tvI~~--~~DvLF---------dKsl~h~s~~V~~  157 (339)
T PF03336_consen   90 DFFDNHRDFIKRDSKNCLEYHLVL-YLNNPENGGKTKIYIDPNDNTVIST--SEDVLF---------DKSLNHESIIVEE  157 (339)
T ss_pred             cchhhhcccceeccCCceEEEEEE-EEeccCCCceEEEEECCCCceeeec--cccEEE---------eccccccceEecc
Confidence            555555531 11222 23567788 99999999999952   22212333  334555         5789999999999


Q ss_pred             CcEEEEE
Q psy6258         124 GNKWGKL  130 (136)
Q Consensus       124 G~K~~~~  130 (136)
                      |+|.||-
T Consensus       158 G~K~VAl  164 (339)
T PF03336_consen  158 GRKIVAL  164 (339)
T ss_pred             CeEEEEE
Confidence            9999964

>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function

Probab=93.84  E-value=0.14  Score=37.99  Aligned_cols=80  Identities=18%  Similarity=0.241  Sum_probs=55.5

Q ss_pred             cccccccCcCCccccCccc--ceeeeecccccc---ccCcccCC----CC---ceEEecccCeEEEEEecCCC-----CC
Q psy6258          47 LLDYWMYHSGCPVALGNKW--GKLLLSGLTDVE---LGGATIFP----SL---NLTVFPEKGSAVFWYNAHAN-----TL  109 (136)
Q Consensus        47 h~D~~s~H~~~pv~~G~R~--aT~l~~yLnd~~---~GG~t~Fp----~~---~~~v~p~~G~al~~~~~~~~-----~~  109 (136)
                      ..||..+|.+.   .|+..  .-+.+ .|++..   .|||-+.-    +.   ...+.+++|+|++|..-..-     |-
T Consensus        71 ~gdyn~LHqdl---yGe~vFPlQvv~-lLs~Pg~DftGGEFVltEQrPR~QSR~~V~~L~qGda~if~t~~RPv~G~rG~  146 (173)
T PF09859_consen   71 PGDYNCLHQDL---YGEHVFPLQVVI-LLSEPGEDFTGGEFVLTEQRPRMQSRAMVLPLRQGDALIFATNHRPVRGARGY  146 (173)
T ss_pred             CCCccccccCC---CCCcccCeEEEE-EcCCCCCcccCceEEEEEecCCccCccccCCcCCCCEEEEecCCCCcCCCccc
Confidence            34777788664   45543  23334 577754   79998873    33   68899999999999765421     23


Q ss_pred             CCccceeccCccccCcEEEEE
Q psy6258         110 LDYRMYHSGCPVALGNKWGKL  130 (136)
Q Consensus       110 ~d~~~~H~~~pv~~G~K~~~~  130 (136)
                      ......|+..+|.+|+.+.+-
T Consensus       147 yRv~~RHgVS~vrsG~R~tLg  167 (173)
T PF09859_consen  147 YRVNMRHGVSRVRSGERHTLG  167 (173)
T ss_pred             eecccccccccccccceEEEE
Confidence            334689999999999988654

>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A

Probab=93.80  E-value=0.16  Score=33.92  Aligned_cols=28  Identities=25%  Similarity=0.370  Sum_probs=17.8

Q ss_pred             ceEEecccCeEEEEEecCCCCCCCccceeccCccccC
Q psy6258          88 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG  124 (136)
Q Consensus        88 ~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G  124 (136)
                      ...++|+.|+.++|++         ...|+..|-.+.
T Consensus        65 ~~~~~p~~G~lvlFPs---------~l~H~v~p~~~~   92 (101)
T PF13759_consen   65 YYIVEPEEGDLVLFPS---------WLWHGVPPNNSD   92 (101)
T ss_dssp             EEEE---TTEEEEEET---------TSEEEE----SS
T ss_pred             eEEeCCCCCEEEEeCC---------CCEEeccCcCCC
Confidence            5789999999999997         788988887764

>PHA02866 Hypothetical protein; Provisional

Probab=93.35  E-value=0.079  Score=42.77  Aligned_cols=55  Identities=22%  Similarity=0.076  Sum_probs=40.3

Q ss_pred             cceeeeeccccccccCcccCCCCceEEecccCeEEEEEecCCCCCCCccceeccCccccCcEEEEE
Q psy6258          65 WGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKL  130 (136)
Q Consensus        65 ~aT~l~~yLnd~~~GG~t~Fp~~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G~K~~~~  130 (136)
                      -.++++ ||+.++.||+|.++--+.++--.+-+.| |         |....|...-|.+|+|.||-
T Consensus       110 ~Y~LvL-yL~~p~~GGkt~iyv~~~t~i~~~~DvL-F---------DKsl~h~S~~V~~G~K~Val  164 (333)
T PHA02866        110 EYTLVL-HLSSPKNGGKTDVCVGDKTVISTADDFL-L---------EKRSEQLSNVVQEGEKIVVA  164 (333)
T ss_pred             EEEEEE-EEeccccCCceEEEeCCCceEeecccee-e---------eccccccceeeecCcEEEEE
Confidence            356778 9999999999999743333322233333 3         67899999999999999874

>TIGR02466 conserved hypothetical protein

Probab=92.96  E-value=0.32  Score=37.00  Aligned_cols=69  Identities=22%  Similarity=0.188  Sum_probs=46.1

Q ss_pred             EeeecccCccccccccCcCCccccCcccceeeeeccccccccCcccC--CCC-------------------ceEEecccC
Q psy6258          38 FWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIF--PSL-------------------NLTVFPEKG   96 (136)
Q Consensus        38 ~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLnd~~~GG~t~F--p~~-------------------~~~v~p~~G   96 (136)
                      .|.|....+.....-.|..       -+.+-.. |++..+.+|...|  |..                   .+.|+|+.|
T Consensus        98 ~W~ni~~~Gg~h~~H~Hp~-------~~lSgvy-Yl~~p~~~g~~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~v~P~~G  169 (201)
T TIGR02466        98 AWVNILPQGGTHSPHLHPG-------SVISGTY-YVQTPENCGAIKFEDPRLDDMMAAPMRIPNAKRAVQRFVYVPPQEG  169 (201)
T ss_pred             EeEEEcCCCCccCceECCC-------ceEEEEE-EEeCCCCCCceeEecCcchhhhccccccCccccccCccEEECCCCC
Confidence            6777665553333223332       2455556 8887777777766  332                   235899999


Q ss_pred             eEEEEEecCCCCCCCccceeccCcccc
Q psy6258          97 SAVFWYNAHANTLLDYRMYHSGCPVAL  123 (136)
Q Consensus        97 ~al~~~~~~~~~~~d~~~~H~~~pv~~  123 (136)
                      +.++|++         ...|+..|...
T Consensus       170 ~lvlFPS---------~L~H~v~p~~~  187 (201)
T TIGR02466       170 RVLLFES---------WLRHEVPPNES  187 (201)
T ss_pred             eEEEECC---------CCceecCCCCC
Confidence            9999997         68898888875

This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.

>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function

Probab=92.47  E-value=0.26  Score=36.61  Aligned_cols=64  Identities=19%  Similarity=0.248  Sum_probs=44.7

Q ss_pred             EeeeecCCC---CCCeeecCCC-------CceecccccceeEeeecc-c-Cc-cccc--cccCcCCccccCcccceeee
Q psy6258           7 SSVELTDVE---LGGATIFPSL-------NLTVFPEKGSAVFWHNAH-A-NT-LLDY--WMYHSGCPVALGNKWGKLLL   70 (136)
Q Consensus         7 ~~iyLnd~~---~GG~T~Fp~l-------~l~v~p~kG~al~~~n~~-~-~~-h~D~--~s~H~~~pv~~G~R~aT~l~   70 (136)
                      +.+-||+..   +|||.+.-..       ...+.+++|+|++|...+ + .+ ..+|  ...|+-++|.+|+|...-++
T Consensus        91 vv~lLs~Pg~DftGGEFVltEQrPR~QSR~~V~~L~qGda~if~t~~RPv~G~rG~yRv~~RHgVS~vrsG~R~tLgli  169 (173)
T PF09859_consen   91 VVILLSEPGEDFTGGEFVLTEQRPRMQSRAMVLPLRQGDALIFATNHRPVRGARGYYRVNMRHGVSRVRSGERHTLGLI  169 (173)
T ss_pred             EEEEcCCCCCcccCceEEEEEecCCccCccccCCcCCCCEEEEecCCCCcCCCccceecccccccccccccceEEEEEE
Confidence            567788855   4999876433       588899999999996322 1 11 2233  34688889999999766555

>PHA02923 hypothetical protein; Provisional

Probab=91.63  E-value=0.21  Score=40.29  Aligned_cols=56  Identities=14%  Similarity=0.088  Sum_probs=42.7

Q ss_pred             ccceeeeeccccccccCcccCCCCceEEecccCeEEEEEecCCCCCCCccceeccCccccCcEEEEEe
Q psy6258          64 KWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLL  131 (136)
Q Consensus        64 R~aT~l~~yLnd~~~GG~t~Fp~~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G~K~~~~~  131 (136)
                      +-..+++ ||+.++.||.|.++.-+-.++ -+-+ ++|         |....|...-|.+|+|.||-.
T Consensus        87 ~~y~LvL-yL~~p~~GGt~i~~~~~t~i~-~~~D-vLF---------dKsl~h~s~~V~~G~K~VAl~  142 (315)
T PHA02923         87 MGYYLVI-YLNRPKSGKTLIYPTPETVIT-SSED-IMF---------SKSLNFRFENVKRGYKLVMCS  142 (315)
T ss_pred             eEEEEEE-EEeccCCCCeEEEecCCCeEe-eccc-eee---------ecccccceeeeecCcEEEEEE
Confidence            4456778 999999999999987663333 2233 333         678999999999999999865

>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily

Probab=90.25  E-value=0.18  Score=31.68  Aligned_cols=37  Identities=24%  Similarity=0.350  Sum_probs=23.9

Q ss_pred             cccccCcCCcc-c-cCcccceeeeeccc----cccccCcccCCC
Q psy6258          49 DYWMYHSGCPV-A-LGNKWGKLLLSGLT----DVELGGATIFPS   86 (136)
Q Consensus        49 D~~s~H~~~pv-~-~G~R~aT~l~~yLn----d~~~GG~t~Fp~   86 (136)
                      |.+..|.+... . ...|..+.++ |||    +...||++.|+.
T Consensus        22 ~~~~~H~D~~~~~~~~~r~~t~ll-YLn~~w~~d~~Gg~~~f~~   64 (70)
T PF13661_consen   22 DFFGWHVDADPSSSGKRRFLTLLL-YLNEDWDEDFGGGELFFDD   64 (70)
T ss_pred             CEeeeeEcCCccccccceeEEEEE-EecccccCccCCcEEEEeC
Confidence            44455544432 1 2456889999 999    455688888865

>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit

Probab=88.90  E-value=0.63  Score=30.39  Aligned_cols=65  Identities=11%  Similarity=0.033  Sum_probs=32.6

Q ss_pred             ccceEEeeeecCCCCCCeeecCCCC--ceecccccceeEeeec-c--cCccccccccCcCCccccCcccceeee
Q psy6258           2 NRAEMSSVELTDVELGGATIFPSLN--LTVFPEKGSAVFWHNA-H--ANTLLDYWMYHSGCPVALGNKWGKLLL   70 (136)
Q Consensus         2 ~R~~T~~iyLnd~~~GG~T~Fp~l~--l~v~p~kG~al~~~n~-~--~~~h~D~~s~H~~~pv~~G~R~aT~l~   70 (136)
                      +++.|++++    +.+|+..|+..+  +.+.+..+..++.... .  -....+....|..++...+.|+....+
T Consensus        26 ~~~~Til~~----~~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~HrV~~~~~~~R~s~~~f   95 (98)
T PF03171_consen   26 DGLLTILFQ----DEVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPATLHRVVPPTEGERYSLTFF   95 (98)
T ss_dssp             -SSEEEEEE----TSTS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS----EEEE--STS-EEEEEEE
T ss_pred             CCeEEEEec----ccchheeccccccccCccCccceeeeeceeeeecccCCccCCceeeeEcCCCCCEEEEEEE
Confidence            367899988    667777777653  5566666644433321 1  123345667899998888999877665

The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....

>KOG3710|consensus

Probab=87.33  E-value=1.8  Score=34.01  Aligned_cols=64  Identities=17%  Similarity=0.232  Sum_probs=44.9

Q ss_pred             cceEEeeeecC---CCC--CCeeecCCCC---ceecccccceeEeeecccCccccccccCcCCccccCcccceeeeeccc
Q psy6258           3 RAEMSSVELTD---VEL--GGATIFPSLN---LTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLT   74 (136)
Q Consensus         3 R~~T~~iyLnd---~~~--GG~T~Fp~l~---l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLn   74 (136)
                      |-.|.+.|||.   +..  |+--+||.-.   ..+.|+-+..|||++.+       +..|..+|. .-.||+..+| |..
T Consensus       169 RcITcIYYlNqNWD~kv~Gg~Lri~pe~~~~~adieP~fdrLlffwSdr-------rnPhev~Pa-~~tryaitvw-yfd  239 (280)
T KOG3710|consen  169 RCITCIYYLNQNWDVKVHGGILRIFPEGSTTFADIEPKFDRLLFFWSDR-------RNPHEVQPA-YATRYAITVW-YFD  239 (280)
T ss_pred             eEEEEEEEcccCcceeeccceeEeccCCCCcccccCcCCCeEEEEEecC-------CCccccccc-cccceEEEEE-Eec
Confidence            77899999996   333  4445888864   56788888999888744       445666663 3568888888 754


Q ss_pred             c
Q psy6258          75 D   75 (136)
Q Consensus        75 d   75 (136)
                      .
T Consensus       240 a  240 (280)
T KOG3710|consen  240 A  240 (280)
T ss_pred             c
Confidence            3

>TIGR02408 ectoine_ThpD ectoine hydroxylase

Probab=82.89  E-value=2.3  Score=33.55  Aligned_cols=25  Identities=20%  Similarity=0.177  Sum_probs=20.0

Q ss_pred             EecccCeEEEEEecCCCCCCCccceeccCccccC
Q psy6258          91 VFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG  124 (136)
Q Consensus        91 v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G  124 (136)
                      +.-++|++++|..         +++|++-|..+.
T Consensus       213 ~~~~aGDvl~f~~---------~~~H~S~~N~s~  237 (277)
T TIGR02408       213 FTGKAGSAVWFDC---------NTMHGSGSNITP  237 (277)
T ss_pred             eccCCceEEEEcc---------ccccCCCCCCCC
Confidence            4458899999975         789999888764

Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	136
3itq_A	216	Crystal Structure Of A Prolyl 4-Hydroxylase From Ba		8e-10

>pdb|3ITQ|A Chain A, Crystal Structure Of A Prolyl 4-Hydroxylase From Bacillus Anthracis Length = 216

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 49  DYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANT 108
           DY+  HS    +  N     L+  L DVE GG T FP LNL+V P KG AV++   + + 
Sbjct: 129 DYFAEHSR---SAANNRISTLVXYLNDVEEGGETFFPKLNLSVHPRKGXAVYFEYFYQDQ 185
Query: 109 LLDYRMYHSGCPVALGNKW 127
            L+    H G PV  G KW
Sbjct: 186 SLNELTLHGGAPVTKGEKW 204

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	136
3itq_A	216	Prolyl 4-hydroxylase, alpha subunit domain protei;	1e-24
3itq_A	216	Prolyl 4-hydroxylase, alpha subunit domain protei;	4e-23
2jig_A	224	Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {	8e-21
2jig_A	224	Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {	4e-19

>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Length = 216

 Score = 92.9 bits (231), Expect = 1e-24
 Identities = 27/60 (45%), Positives = 34/60 (56%)

Query: 69  LLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWG 128
           L+  L DVE GG T FP LNL+V P KG AV++   + +  L+    H G PV  G KW 
Sbjct: 146 LVMYLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWI 205

>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Length = 216

 Score = 88.7 bits (220), Expect = 4e-23
 Identities = 26/58 (44%), Positives = 33/58 (56%)

Query: 9   VELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWG 66
           + L DVE GG T FP LNL+V P KG AV++   + +  L+    H G PV  G KW 
Sbjct: 148 MYLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWI 205

>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Length = 224

 Score = 83.0 bits (205), Expect = 8e-21
 Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 15/96 (15%)

Query: 48  LDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLN---------------LTVF 92
            DY+          G +    +L  LT VE GG T+ P+                 L V 
Sbjct: 115 YDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVK 174

Query: 93  PEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWG 128
           P KG A+ +Y+   +   D    H  CP   G+KW 
Sbjct: 175 PIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWS 210

>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Length = 224

 Score = 78.4 bits (193), Expect = 4e-19
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 15/71 (21%)

Query: 11  LTDVELGGATIFPSLN---------------LTVFPEKGSAVFWHNAHANTLLDYWMYHS 55
           LT VE GG T+ P+                 L V P KG A+ +++   +   D    H 
Sbjct: 140 LTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHG 199

Query: 56  GCPVALGNKWG 66
            CP   G+KW 
Sbjct: 200 SCPTLKGDKWS 210

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	136
3itq_A	216	Prolyl 4-hydroxylase, alpha subunit domain protei;	99.94
2jig_A	224	Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {	99.94
3itq_A	216	Prolyl 4-hydroxylase, alpha subunit domain protei;	99.8
2jig_A	224	Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {	99.8
3dkq_A	243	PKHD-type hydroxylase SBAL_3634; putative oxygenas	99.67
3dkq_A	243	PKHD-type hydroxylase SBAL_3634; putative oxygenas	99.22
2hbt_A	247	EGL nine homolog 1; prolyl hydroxylase, hypoxia in	98.95
2hbt_A	247	EGL nine homolog 1; prolyl hydroxylase, hypoxia in	98.24
2rg4_A	216	Uncharacterized protein; rhodobacterales, oceanico	95.79
3kt7_A	633	PKHD-type hydroxylase TPA1; double-stranded beta h	94.42
2rg4_A	216	Uncharacterized protein; rhodobacterales, oceanico	88.67
2a1x_A	308	Phytanoyl-COA dioxygenase; beta jelly roll, double	85.31
3kt7_A	633	PKHD-type hydroxylase TPA1; double-stranded beta h	83.73

>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}

Probab=99.94  E-value=3.2e-28  Score=185.33  Aligned_cols=92  Identities=35%  Similarity=0.539  Sum_probs=83.0

Q ss_pred             ecccCccccccccCcCCccccCcccceeeeeccccccccCcccCCCCceEEecccCeEEEEEecCCCCCCCccceeccCc
Q psy6258          41 NAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCP  120 (136)
Q Consensus        41 n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLnd~~~GG~t~Fp~~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~p  120 (136)
                      +++|+.|.|++...  .+...|+|.+|+++ ||||+++||+|+||+++++|+|++|+||+|+|++++|+.|.+++|++||
T Consensus       121 G~~y~~H~D~~~~~--~~~~~~~R~~T~l~-YLnd~~~GGeT~Fp~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~P  197 (216)
T 3itq_A          121 DQQYKAHYDYFAEH--SRSAANNRISTLVM-YLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAP  197 (216)
T ss_dssp             TCCEEEECSSCCTT--SGGGGGCEEEEEEE-ECSCCSEECCEEETTTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECC
T ss_pred             CCccccccCCCcCC--CcccCCceEEEEEE-ecccCCcCceeEecCCCCEEecCCCeEEEEeccCCCCCCCCccccccce
Confidence            56778889986543  22346899999999 9999999999999999999999999999999999999999999999999


Q ss_pred             cccCcEEEEEecccc
Q psy6258         121 VALGNKWGKLLLSGV  135 (136)
Q Consensus       121 v~~G~K~~~~~w~~~  135 (136)
                      |.+|+||++|+|+..
T Consensus       198 V~~G~K~v~~~W~~~  212 (216)
T 3itq_A          198 VTKGEKWIATQWVRR  212 (216)
T ss_dssp             EEESCEEEEEEEEES
T ss_pred             eccccEEEEEeeEec
Confidence            999999999999863

>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A

Probab=99.94  E-value=2.5e-27  Score=180.12  Aligned_cols=94  Identities=30%  Similarity=0.475  Sum_probs=82.1

Q ss_pred             ecccCccccccccCcC-CccccCcccceeeeeccccccccCcccCCCC---------------ceEEecccCeEEEEEec
Q psy6258          41 NAHANTLLDYWMYHSG-CPVALGNKWGKLLLSGLTDVELGGATIFPSL---------------NLTVFPEKGSAVFWYNA  104 (136)
Q Consensus        41 n~~~~~h~D~~s~H~~-~pv~~G~R~aT~l~~yLnd~~~GG~t~Fp~~---------------~~~v~p~~G~al~~~~~  104 (136)
                      +++|+.|.|++..... .+...++|.+|+++ ||||+++||||+||.+               +++|+|++|+||+|+|+
T Consensus       108 G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~-YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~  186 (224)
T 2jig_A          108 GQKYEPHYDYFHDPVNAGPEHGGQRVVTMLM-YLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSL  186 (224)
T ss_dssp             TCCEEEECCSSCCTTSSSCCCCSCEEEEEEE-ECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEESB
T ss_pred             CccccCcccCCCCccccccccCCCeEEEEEE-EecCCCCCCceeCCCcccccccccccccccCceEEecccCcEEEEEee
Confidence            5677888998653211 11245789999999 9999999999999997               69999999999999999


Q ss_pred             CCCCCCCccceeccCccccCcEEEEEecccc
Q psy6258         105 HANTLLDYRMYHSGCPVALGNKWGKLLLSGV  135 (136)
Q Consensus       105 ~~~~~~d~~~~H~~~pv~~G~K~~~~~w~~~  135 (136)
                      +++|+.|.+++|++|||.+|+||++++|+..
T Consensus       187 ~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~  217 (224)
T 2jig_A          187 KPDGSNDPASLHGSCPTLKGDKWSATKWIHV  217 (224)
T ss_dssp             CTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred             CCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence            9999999999999999999999999999864

>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}

Probab=99.80  E-value=1.8e-20  Score=142.47  Aligned_cols=69  Identities=41%  Similarity=0.635  Sum_probs=66.9

Q ss_pred             ccceEEeeeecCCCCCCeeecCCCCceecccccceeEeeecccCccccccccCcCCccccCcccceeee
Q psy6258           2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLL   70 (136)
Q Consensus         2 ~R~~T~~iyLnd~~~GG~T~Fp~l~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~   70 (136)
                      +|++|+++||||+++||+|.||.++++|+|++|+|++|+|.+.++..|..++|++|||..|.||+...|
T Consensus       141 ~R~~T~l~YLnd~~~GGeT~Fp~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W  209 (216)
T 3itq_A          141 NRISTLVMYLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQW  209 (216)
T ss_dssp             CEEEEEEEECSCCSEECCEEETTTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEE
T ss_pred             ceEEEEEEecccCCcCceeEecCCCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEee
Confidence            799999999999999999999999999999999999999999999999999999999999999988877

>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A

Probab=99.80  E-value=4.1e-20  Score=140.19  Aligned_cols=69  Identities=32%  Similarity=0.497  Sum_probs=66.1

Q ss_pred             ccceEEeeeecCCCCCCeeecCCC---------------CceecccccceeEeeecccCccccccccCcCCccccCcccc
Q psy6258           2 NRAEMSSVELTDVELGGATIFPSL---------------NLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWG   66 (136)
Q Consensus         2 ~R~~T~~iyLnd~~~GG~T~Fp~l---------------~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~a   66 (136)
                      +|++|+++||||+++||+|.||.+               +++|+|++|+||+|+|.+.+++.|..++|++|||..|.||+
T Consensus       131 ~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~  210 (224)
T 2jig_A          131 QRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWS  210 (224)
T ss_dssp             CEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEE
T ss_pred             CeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEE
Confidence            799999999999999999999998               58999999999999999999999999999999999999998


Q ss_pred             eeee
Q psy6258          67 KLLL   70 (136)
Q Consensus        67 T~l~   70 (136)
                      ...|
T Consensus       211 ~~~W  214 (224)
T 2jig_A          211 ATKW  214 (224)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            8877

>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}

Probab=99.67  E-value=1.5e-17  Score=128.47  Aligned_cols=82  Identities=15%  Similarity=0.109  Sum_probs=65.0

Q ss_pred             ecccCccccccccCcCCccccCcccceeeeecccc--ccccCcccCCCC--ceEEecccCeEEEEEecCCCCCCCcccee
Q psy6258          41 NAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTD--VELGGATIFPSL--NLTVFPEKGSAVFWYNAHANTLLDYRMYH  116 (136)
Q Consensus        41 n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLnd--~~~GG~t~Fp~~--~~~v~p~~G~al~~~~~~~~~~~d~~~~H  116 (136)
                      ++++..|.|.......  ....+|.+|+++ ||||  +.+||||+||..  +.+|+|++|+||+|.+         .++|
T Consensus       109 G~~y~~H~D~~~~~~~--~~~~~r~~T~~l-YLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s---------~~lH  176 (243)
T 3dkq_A          109 GETFGYHIDNAIRSTP--DGMIRTDLSATL-FLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS---------SSLH  176 (243)
T ss_dssp             TCEEEEECBCSEEEET--TEEEECCEEEEE-ECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET---------TSEE
T ss_pred             CCeeccCCCCCCCCCC--CccccceEEEEE-EeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC---------CCeE
Confidence            3455666666433210  012356899999 9999  669999999986  6899999999999975         4899


Q ss_pred             ccCccccCcEEEEEeccc
Q psy6258         117 SGCPVALGNKWGKLLLSG  134 (136)
Q Consensus       117 ~~~pv~~G~K~~~~~w~~  134 (136)
                      ++|||.+|+||+++.|+.
T Consensus       177 ~v~pV~~G~R~~~~~Wi~  194 (243)
T 3dkq_A          177 QVTPVLSGERTAAFMWLQ  194 (243)
T ss_dssp             EECCEEEECEEEEEEEEE
T ss_pred             cCccccccCEEEEEEehh
Confidence            999999999999999985

>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}

Probab=99.22  E-value=2.7e-12  Score=98.97  Aligned_cols=60  Identities=17%  Similarity=0.246  Sum_probs=54.0

Q ss_pred             ccceEEeeeecC--CCCCCeeecCCC--CceecccccceeEeeecccCccccccccCcCCccccCcccceeee
Q psy6258           2 NRAEMSSVELTD--VELGGATIFPSL--NLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLL   70 (136)
Q Consensus         2 ~R~~T~~iyLnd--~~~GG~T~Fp~l--~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~   70 (136)
                      +|.+|+++||||  +.+||+|+||..  +.+|+|++|++++|++         .++|++|||..|.||+.+.|
T Consensus       129 ~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s---------~~lH~v~pV~~G~R~~~~~W  192 (243)
T 3dkq_A          129 RTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS---------SSLHQVTPVLSGERTAAFMW  192 (243)
T ss_dssp             ECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET---------TSEEEECCEEEECEEEEEEE
T ss_pred             cceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC---------CCeEcCccccccCEEEEEEe
Confidence            589999999999  668999999987  5899999999999974         26999999999999988877

>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*

Probab=98.95  E-value=8.3e-10  Score=85.00  Aligned_cols=76  Identities=17%  Similarity=0.207  Sum_probs=59.1

Q ss_pred             cccccCcCCccccCcccceeeeecccc----ccccCccc-CCCC---ceEEecccCeEEEEEecCCCCCCCccceeccCc
Q psy6258          49 DYWMYHSGCPVALGNKWGKLLLSGLTD----VELGGATI-FPSL---NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCP  120 (136)
Q Consensus        49 D~~s~H~~~pv~~G~R~aT~l~~yLnd----~~~GG~t~-Fp~~---~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~p  120 (136)
                      +++..|.+.+ ...+|..|.++ |||+    .+.||+|. ||..   ..+|.|+.|++++|.+       +.++.|+.+|
T Consensus       129 ~~y~~H~D~~-~~~~R~~T~vl-YLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s-------~~~~~H~V~p  199 (247)
T 2hbt_A          129 TGYVRHVDNP-NGDGRCVTCIY-YLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWS-------DRRNPHEVQP  199 (247)
T ss_dssp             CCEEEECSSC-SCCSEEEEEEE-ECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEEC-------STTCCEEECC
T ss_pred             CcccccccCC-CCCCceEEEEE-EeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEec-------CCCceeeecc
Confidence            3444555553 23578899999 9999    36799986 6654   3799999999999986       3458999999


Q ss_pred             cccCcEEEEEeccc
Q psy6258         121 VALGNKWGKLLLSG  134 (136)
Q Consensus       121 v~~G~K~~~~~w~~  134 (136)
                      + .|.+|.++.|+.
T Consensus       200 ~-~~~R~sit~W~~  212 (247)
T 2hbt_A          200 A-YATRYAITVWYF  212 (247)
T ss_dssp             B-SSCEEEEEEEEE
T ss_pred             C-CCEEEEEEEEEc
Confidence            5 599999999985

>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*

Probab=98.24  E-value=6.7e-07  Score=68.68  Aligned_cols=64  Identities=17%  Similarity=0.168  Sum_probs=49.9

Q ss_pred             ccceEEeeeecCC----CCCCeee-cCCC---CceecccccceeEeeecccCccccccccCcCCccccCcccceeeeecc
Q psy6258           2 NRAEMSSVELTDV----ELGGATI-FPSL---NLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGL   73 (136)
Q Consensus         2 ~R~~T~~iyLnd~----~~GG~T~-Fp~l---~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yL   73 (136)
                      +|..|+++|||+.    +.||++. ||..   ..+|.|+.|.+++|.+.       ..+.|..+| ..+.|++...| |-
T Consensus       142 ~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~-------~~~~H~V~p-~~~~R~sit~W-~~  212 (247)
T 2hbt_A          142 GRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD-------RRNPHEVQP-AYATRYAITVW-YF  212 (247)
T ss_dssp             SEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS-------TTCCEEECC-BSSCEEEEEEE-EE
T ss_pred             CceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC-------CCceeeecc-CCCEEEEEEEE-Ec
Confidence            6999999999993    5699985 6654   37899999999999753       236898888 46788877666 54


Q ss_pred             c
Q psy6258          74 T   74 (136)
Q Consensus        74 n   74 (136)
                      .
T Consensus       213 ~  213 (247)
T 2hbt_A          213 D  213 (247)
T ss_dssp             E
T ss_pred             C
Confidence            3

>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A

Probab=95.79  E-value=0.019  Score=42.73  Aligned_cols=73  Identities=16%  Similarity=0.123  Sum_probs=52.8

Q ss_pred             EeeecccCccccccccCcCCccccCcccceeeeeccccccccCcccC--CCC------------------c-eEEecccC
Q psy6258          38 FWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIF--PSL------------------N-LTVFPEKG   96 (136)
Q Consensus        38 ~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLnd~~~GG~t~F--p~~------------------~-~~v~p~~G   96 (136)
                      .|.+....+  ++...|..     .+++.+..+ ||+..+.||+..|  |+.                  . ..|+|+.|
T Consensus       105 ~W~~~~~~G--~~~~~H~H-----~~~~lSgV~-Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G  176 (216)
T 2rg4_A          105 IWINILPEG--GVHGSHIH-----PHSVISGTT-YVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVG  176 (216)
T ss_dssp             EEEEEECTT--CCEEEECC-----TTCSEEEEE-EEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTT
T ss_pred             EEEEEcCCC--CcccCccC-----CCCeEEEEE-EEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCC
Confidence            677665554  34445532     356777778 9999889999999  421                  1 37999999


Q ss_pred             eEEEEEecCCCCCCCccceeccCcccc-CcEE
Q psy6258          97 SAVFWYNAHANTLLDYRMYHSGCPVAL-GNKW  127 (136)
Q Consensus        97 ~al~~~~~~~~~~~d~~~~H~~~pv~~-G~K~  127 (136)
                      +.++|.+         ...|+..|..+ ++.+
T Consensus       177 ~lvlFpS---------~l~H~V~p~~~~~~Ri  199 (216)
T 2rg4_A          177 DVLLWES---------WLRHEVPMNMAEEDRI  199 (216)
T ss_dssp             EEEEEET---------TSCEEECCCCSSSCEE
T ss_pred             eEEEECC---------CCEEeccCCCCCCCEE
Confidence            9999986         58999999876 3444

>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A

Probab=94.42  E-value=0.062  Score=46.09  Aligned_cols=76  Identities=14%  Similarity=0.121  Sum_probs=54.7

Q ss_pred             cccccCcCCccccCcccceeeeeccccc------cccCcccCCC----------CceEEecccCeEEEEEecCCCCCCCc
Q psy6258          49 DYWMYHSGCPVALGNKWGKLLLSGLTDV------ELGGATIFPS----------LNLTVFPEKGSAVFWYNAHANTLLDY  112 (136)
Q Consensus        49 D~~s~H~~~pv~~G~R~aT~l~~yLnd~------~~GG~t~Fp~----------~~~~v~p~~G~al~~~~~~~~~~~d~  112 (136)
                      ++...|.+.   .+.|..++++ |||+.      +-||+..+=.          ...+|.|.-|+.++|..-      ..
T Consensus       135 ~fL~~H~D~---~~~RrvS~VL-YLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~  204 (633)
T 3kt7_A          135 CHLLTHDDV---IGSRRISFIL-YLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVL------PG  204 (633)
T ss_dssp             CEEEEECCC---CTTEEEEEEE-ECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEEECC------TT
T ss_pred             CeeeecCCC---CCCeEEEEEE-EcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEEEcC------CC
Confidence            344455543   2458888888 99984      3699986522          346799999998888752      02


Q ss_pred             cceeccCccc-cCcEEEEEeccc
Q psy6258         113 RMYHSGCPVA-LGNKWGKLLLSG  134 (136)
Q Consensus       113 ~~~H~~~pv~-~G~K~~~~~w~~  134 (136)
                      ++.|+-.||. ....+..+-|+.
T Consensus       205 ~S~H~V~eV~~~~~RlSItGWF~  227 (633)
T 3kt7_A          205 FSFHDXEEVKVDKHRLSIQGWYH  227 (633)
T ss_dssp             TCCEEECCBCSSCCEEEEEEEEE
T ss_pred             CCcCCCCccCCCCCEEEEEEEec
Confidence            7999999998 456889999975

>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A

Probab=88.67  E-value=0.69  Score=34.16  Aligned_cols=55  Identities=13%  Similarity=0.114  Sum_probs=40.5

Q ss_pred             ccceEEeeeecCCCCCCeeecCCC--------------------C-ceecccccceeEeeecccCccccccccCcCCccc
Q psy6258           2 NRAEMSSVELTDVELGGATIFPSL--------------------N-LTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVA   60 (136)
Q Consensus         2 ~R~~T~~iyLnd~~~GG~T~Fp~l--------------------~-l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~   60 (136)
                      +|..+..+||+..+.||+..|-.-                    . ..++|+.|+.++|++.         ..|.-.|..
T Consensus       123 ~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~---------l~H~V~p~~  193 (216)
T 2rg4_A          123 HSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESW---------LRHEVPMNM  193 (216)
T ss_dssp             TCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETT---------SCEEECCCC
T ss_pred             CCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCC---------CEEeccCCC
Confidence            467889999999888999998431                    1 2689999999999863         366666644


Q ss_pred             c-Cccc
Q psy6258          61 L-GNKW   65 (136)
Q Consensus        61 ~-G~R~   65 (136)
                      . +.|+
T Consensus       194 ~~~~Ri  199 (216)
T 2rg4_A          194 AEEDRI  199 (216)
T ss_dssp             SSSCEE
T ss_pred             CCCCEE
Confidence            3 4564

>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9

Probab=85.31  E-value=1.8  Score=32.86  Aligned_cols=34  Identities=21%  Similarity=0.220  Sum_probs=25.0

Q ss_pred             eEEecccCeEEEEEecCCCCCCCccceeccCcccc-CcEEEEEe
Q psy6258          89 LTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL-GNKWGKLL  131 (136)
Q Consensus        89 ~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~-G~K~~~~~  131 (136)
                      +.+.-++|++++|.         .+++|++.|..+ ...++...
T Consensus       216 v~~~~~aGd~vlf~---------~~~~H~s~~N~s~~~R~~~~~  250 (308)
T 2a1x_A          216 VHLVMEKGDTVFFH---------PLLIHGSGQNKTQGFRKAISC  250 (308)
T ss_dssp             EEECBCTTCEEEEC---------TTCCEEECCBCSSSCEEEEEE
T ss_pred             EEccCCCccEEEEC---------CCccccCCCCCCCCceEEEEE
Confidence            45666899999986         479999999876 34555443

>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A

Probab=83.73  E-value=1.5  Score=37.69  Aligned_cols=69  Identities=17%  Similarity=0.189  Sum_probs=44.1

Q ss_pred             ccceEEeeeecCC------CCCCeeec-CC---------CCceecccccceeEeeecccCccccccccCcCCccc-cCcc
Q psy6258           2 NRAEMSSVELTDV------ELGGATIF-PS---------LNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVA-LGNK   64 (136)
Q Consensus         2 ~R~~T~~iyLnd~------~~GG~T~F-p~---------l~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~-~G~R   64 (136)
                      .|..|+++|||+.      +.||+..+ +.         ...+|.|.-|..++|....      -.+.|.-.+|. ...|
T Consensus       146 ~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vsp------~~S~H~V~eV~~~~~R  219 (633)
T 3kt7_A          146 SRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLP------GFSFHDXEEVKVDKHR  219 (633)
T ss_dssp             TEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEEECCT------TTCCEEECCBCSSCCE
T ss_pred             CeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEEEcCC------CCCcCCCCccCCCCCE
Confidence            4889999999984      35888843 32         3457999999988886531      13567666664 4456


Q ss_pred             cceeeeeccccc
Q psy6258          65 WGKLLLSGLTDV   76 (136)
Q Consensus        65 ~aT~l~~yLnd~   76 (136)
                      +...-|.+-+..
T Consensus       220 lSItGWF~~p~~  231 (633)
T 3kt7_A          220 LSIQGWYHIPQV  231 (633)
T ss_dssp             EEEEEEEECCCT
T ss_pred             EEEEEEeccCCC
Confidence            544444144444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	136
d2a1xa1	296	Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapie	90.1

>d2a1xa1 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: PhyH-like
domain: Phytanoyl-CoA dioxygenase, PhyH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.10  E-value=0.47  Score=33.64  Aligned_cols=57  Identities=16%  Similarity=0.208  Sum_probs=38.2

Q ss_pred             cccceeeeecccccc-ccCcccC-CCC--------------------------------ceEEecccCeEEEEEecCCCC
Q psy6258          63 NKWGKLLLSGLTDVE-LGGATIF-PSL--------------------------------NLTVFPEKGSAVFWYNAHANT  108 (136)
Q Consensus        63 ~R~aT~l~~yLnd~~-~GG~t~F-p~~--------------------------------~~~v~p~~G~al~~~~~~~~~  108 (136)
                      ....++++ +|.|+. +.|.+.+ |..                                .+.+.-++|++++|.      
T Consensus       145 ~~~~~~wi-~L~d~~~~nG~l~vipGSHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~k~Gdvli~~------  217 (296)
T d2a1xa1         145 DLIVCAWT-AMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFH------  217 (296)
T ss_dssp             GGEEEEEE-ESSCBCTTBTCEEECTTGGGSCCCCCCC-----------CCCCC-CCCSCCEEECBCTTCEEEEC------
T ss_pred             cccceeeE-eeeeccccccccceecccccccccccccccccCCcccccccccchhhccceEEeeecCCcEEEEC------
Confidence            34567777 999975 4455544 532                                134556899999996      


Q ss_pred             CCCccceeccCcccc-CcEEEE
Q psy6258         109 LLDYRMYHSGCPVAL-GNKWGK  129 (136)
Q Consensus       109 ~~d~~~~H~~~pv~~-G~K~~~  129 (136)
                         .+++|++.|..+ ...+..
T Consensus       218 ---~~l~Hgs~~N~S~~~R~~l  236 (296)
T d2a1xa1         218 ---PLLIHGSGQNKTQGFRKAI  236 (296)
T ss_dssp             ---TTCCEEECCBCSSSCEEEE
T ss_pred             ---CCeeecCCCCCCcCceEEE
Confidence               489999999775 344443