Psyllid ID: psy6344

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ
ccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEcccEEEEEEEEEEccEEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccc
cHHHHHHHHHcHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccEEccccccccccccEEEccEEEccccEEEEEEHHHccccEEEEEEEcccHHHHccEcHHHHHHHHHHHHHHHHHccccccccEEEEEEcccEEE
msvrgkirehckdLVLSDEQLREVMSKLLLAINKgldkntnkeavvkcfptyvqdlpngkekGKFLALDLGGTNFRVLIIYLEENHFKMESkvysipqdimtgsgtQLFDHIAECLADFMrdndvaserlplgftfsfpltq
msvrgkirehckdlvlsdeQLREVMSKLLLAINkgldkntnkeavVKCFPTyvqdlpngkEKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASerlplgftfsfpltq
MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ
**********CKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSF****
***RGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ
********EHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ
MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query142 2.2.26 [Sep-21-2011]
P52789 917 Hexokinase-2 OS=Homo sapi yes N/A 0.964 0.149 0.514 1e-35
Q1W674 917 Hexokinase-2 OS=Sus scrof yes N/A 0.964 0.149 0.514 1e-35
O08528 917 Hexokinase-2 OS=Mus muscu yes N/A 0.964 0.149 0.514 2e-35
P27881 917 Hexokinase-2 OS=Rattus no yes N/A 0.894 0.138 0.546 4e-35
A2PYL6 917 Hexokinase-2 OS=Equus cab yes N/A 0.964 0.149 0.507 2e-34
A2PYL7 917 Hexokinase-2 OS=Equus zeb N/A N/A 0.964 0.149 0.507 2e-34
A2PYL8 917 Hexokinase-2 OS=Equus gre N/A N/A 0.964 0.149 0.507 2e-34
Q9NFT7 486 Hexokinase type 2 OS=Dros no N/A 0.985 0.288 0.489 2e-33
P19367 917 Hexokinase-1 OS=Homo sapi no N/A 0.950 0.147 0.471 7e-33
Q91W97 915 Putative hexokinase HKDC1 no N/A 0.894 0.138 0.484 2e-32
>sp|P52789|HXK2_HUMAN Hexokinase-2 OS=Homo sapiens GN=HK2 PE=1 SV=2 Back     alignment and function desciption
 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/140 (51%), Positives = 97/140 (69%), Gaps = 3/140 (2%)

Query: 6   KIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKF 65
           K+ ++   + LSDE L E+  +    + KGL   T+  A VK  PT+V+  P+G E G+F
Sbjct: 21  KVDQYLYHMRLSDETLLEISKRFRKEMEKGLGATTHPTAAVKMLPTFVRSTPDGTEHGEF 80

Query: 66  LALDLGGTNFRVLIIYLEENHFK---MESKVYSIPQDIMTGSGTQLFDHIAECLADFMRD 122
           LALDLGGTNFRVL + + +N  +   ME+++Y+IP+DIM GSGTQLFDHIAECLA+FM  
Sbjct: 81  LALDLGGTNFRVLWVKVTDNGLQKVEMENQIYAIPEDIMRGSGTQLFDHIAECLANFMDK 140

Query: 123 NDVASERLPLGFTFSFPLTQ 142
             +  ++LPLGFTFSFP  Q
Sbjct: 141 LQIKDKKLPLGFTFSFPCHQ 160

Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1
>sp|Q1W674|HXK2_PIG Hexokinase-2 OS=Sus scrofa GN=HK2 PE=2 SV=1 Back     alignment and function description
>sp|O08528|HXK2_MOUSE Hexokinase-2 OS=Mus musculus GN=Hk2 PE=1 SV=1 Back     alignment and function description
>sp|P27881|HXK2_RAT Hexokinase-2 OS=Rattus norvegicus GN=Hk2 PE=1 SV=1 Back     alignment and function description
>sp|A2PYL6|HXK2_HORSE Hexokinase-2 OS=Equus caballus GN=HK2 PE=2 SV=1 Back     alignment and function description
>sp|A2PYL7|HXK2_EQUZE Hexokinase-2 OS=Equus zebra GN=HK2 PE=2 SV=1 Back     alignment and function description
>sp|A2PYL8|HXK2_EQUGR Hexokinase-2 OS=Equus grevyi GN=HK2 PE=2 SV=1 Back     alignment and function description
>sp|Q9NFT7|HXK2_DROME Hexokinase type 2 OS=Drosophila melanogaster GN=Hex-t2 PE=2 SV=4 Back     alignment and function description
>sp|P19367|HXK1_HUMAN Hexokinase-1 OS=Homo sapiens GN=HK1 PE=1 SV=3 Back     alignment and function description
>sp|Q91W97|HKDC1_MOUSE Putative hexokinase HKDC1 OS=Mus musculus GN=Hkdc1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query142
51511833 445 hexokinase [Aedes albopictus] 0.957 0.305 0.722 4e-52
157123148 453 hexokinase [Aedes aegypti] gi|108874524| 0.964 0.302 0.717 4e-52
312373968 449 hypothetical protein AND_16684 [Anophele 0.957 0.302 0.715 7e-52
157123146 461 hexokinase [Aedes aegypti] gi|403183034| 0.985 0.303 0.702 1e-51
85376484174 hexokinase [Aedes aegypti] 0.957 0.781 0.715 2e-51
170045020 449 hexokinase [Culex quinquefasciatus] gi|1 1.0 0.316 0.692 3e-51
77168478143 hexokinase 4 [Anopheles arabiensis] gi|7 0.978 0.972 0.692 3e-51
77168474144 hexokinase 2 [Anopheles arabiensis] 0.943 0.930 0.711 8e-51
77168472148 hexokinase 1 [Anopheles arabiensis] 0.964 0.925 0.695 1e-50
77168484138 hexokinase 1 [Anopheles merus] 0.936 0.963 0.708 3e-50
>gi|51511833|gb|AAU05128.1| hexokinase [Aedes albopictus] Back     alignment and taxonomy information
 Score =  209 bits (531), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 99/137 (72%), Positives = 120/137 (87%), Gaps = 1/137 (0%)

Query: 7   IREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFL 66
           IRE C++L+LSD+Q+ E+M +LL  INKGL+K T+ EA +KCF TYVQDLPNGKEKGKFL
Sbjct: 12  IREQCQELILSDKQIEEIMRRLLKEINKGLNKATHPEADIKCFITYVQDLPNGKEKGKFL 71

Query: 67  ALDLGGTNFRVLIIYL-EENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDV 125
           ALDLGGTNFRVL+I+L +EN F+M SK+Y+IPQ IM GSGTQLFDHIAECLA+FM+++ V
Sbjct: 72  ALDLGGTNFRVLLIHLKDENDFEMVSKIYAIPQSIMLGSGTQLFDHIAECLANFMKEHSV 131

Query: 126 ASERLPLGFTFSFPLTQ 142
             E+LPLGFTFSFPLTQ
Sbjct: 132 YEEKLPLGFTFSFPLTQ 148

Source: Aedes albopictus

Species: Aedes albopictus

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|157123148|ref|XP_001660031.1| hexokinase [Aedes aegypti] gi|108874524|gb|EAT38749.1| AAEL009387-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|312373968|gb|EFR21629.1| hypothetical protein AND_16684 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|157123146|ref|XP_001660030.1| hexokinase [Aedes aegypti] gi|403183034|gb|EJY57803.1| AAEL009387-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|85376484|gb|ABC70480.1| hexokinase [Aedes aegypti] Back     alignment and taxonomy information
>gi|170045020|ref|XP_001850122.1| hexokinase [Culex quinquefasciatus] gi|167868074|gb|EDS31457.1| hexokinase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|77168478|gb|ABA63176.1| hexokinase 4 [Anopheles arabiensis] gi|77168482|gb|ABA63178.1| hexokinase 4 [Anopheles merus] Back     alignment and taxonomy information
>gi|77168474|gb|ABA63174.1| hexokinase 2 [Anopheles arabiensis] Back     alignment and taxonomy information
>gi|77168472|gb|ABA63173.1| hexokinase 1 [Anopheles arabiensis] Back     alignment and taxonomy information
>gi|77168484|gb|ABA63179.1| hexokinase 1 [Anopheles merus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query142
FB|FBgn0001186 541 Hex-A "Hexokinase A" [Drosophi 0.957 0.251 0.649 2.7e-45
FB|FBgn0001187 454 Hex-C "Hexokinase C" [Drosophi 0.964 0.301 0.543 2.4e-37
WB|WBGene00008780 500 F14B4.2 [Caenorhabditis elegan 0.950 0.27 0.547 1.3e-34
UNIPROTKB|Q19440 500 F14B4.2 "Protein F14B4.2, isof 0.950 0.27 0.547 1.3e-34
UNIPROTKB|Q6BET1 495 F14B4.2 "Protein F14B4.2, isof 0.950 0.272 0.547 1.3e-34
UNIPROTKB|P52789 917 HK2 "Hexokinase-2" [Homo sapie 0.964 0.149 0.514 4.1e-32
MGI|MGI:1315197 917 Hk2 "hexokinase 2" [Mus muscul 0.964 0.149 0.514 4.1e-32
UNIPROTKB|Q1W674 917 HK2 "Hexokinase-2" [Sus scrofa 0.964 0.149 0.514 5.3e-32
FB|FBgn0042710 486 Hex-t2 "Hex-t2" [Drosophila me 0.985 0.288 0.489 6e-32
UNIPROTKB|E1BME6 914 LOC614107 "Uncharacterized pro 0.964 0.149 0.514 6.7e-32
FB|FBgn0001186 Hex-A "Hexokinase A" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 89/137 (64%), Positives = 117/137 (85%)

Query:     7 IREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFL 66
             + E C+ L+L+DEQ++E+  ++L  + +GL K+T+ +A VKCF TYVQDLPNG E+GKFL
Sbjct:    95 VHELCQQLLLTDEQVQELCYRILHELRRGLAKDTHPKANVKCFVTYVQDLPNGNERGKFL 154

Query:    67 ALDLGGTNFRVLIIYLEENH-FKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDV 125
             ALDLGGTNFRVL+I+L+EN+ F+MES++Y+IPQ IM GSGTQLFDHIAECL++FM +++V
Sbjct:   155 ALDLGGTNFRVLLIHLQENNDFQMESRIYAIPQHIMIGSGTQLFDHIAECLSNFMAEHNV 214

Query:   126 ASERLPLGFTFSFPLTQ 142
               ERLPLGFTFSFPL Q
Sbjct:   215 YKERLPLGFTFSFPLRQ 231
GO:0004396 "hexokinase activity" evidence=IMP;IDA
GO:0005524 "ATP binding" evidence=IEA
GO:0060361 "flight" evidence=IMP
GO:0004340 "glucokinase activity" evidence=IBA
GO:0001678 "cellular glucose homeostasis" evidence=IBA
GO:0006096 "glycolysis" evidence=IBA
GO:0005829 "cytosol" evidence=IBA
GO:0019158 "mannokinase activity" evidence=IBA
GO:0008865 "fructokinase activity" evidence=IBA
FB|FBgn0001187 Hex-C "Hexokinase C" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00008780 F14B4.2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q19440 F14B4.2 "Protein F14B4.2, isoform a" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q6BET1 F14B4.2 "Protein F14B4.2, isoform b" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|P52789 HK2 "Hexokinase-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1315197 Hk2 "hexokinase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q1W674 HK2 "Hexokinase-2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
FB|FBgn0042710 Hex-t2 "Hex-t2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E1BME6 LOC614107 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P27881HXK2_RAT2, ., 7, ., 1, ., 10.54610.89430.1384yesN/A
O08528HXK2_MOUSE2, ., 7, ., 1, ., 10.51420.96470.1494yesN/A
A2PYL6HXK2_HORSE2, ., 7, ., 1, ., 10.50710.96470.1494yesN/A
P52789HXK2_HUMAN2, ., 7, ., 1, ., 10.51420.96470.1494yesN/A
Q1W674HXK2_PIG2, ., 7, ., 1, ., 10.51420.96470.1494yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.1LOW CONFIDENCE prediction!
3rd Layer2.7.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query142
pfam00349205 pfam00349, Hexokinase_1, Hexokinase 2e-54
PTZ00107 464 PTZ00107, PTZ00107, hexokinase; Provisional 7e-28
COG5026 466 COG5026, COG5026, Hexokinase [Carbohydrate transpo 2e-27
PLN02405 497 PLN02405, PLN02405, hexokinase 2e-23
PLN02914 490 PLN02914, PLN02914, hexokinase 2e-23
PLN02362 509 PLN02362, PLN02362, hexokinase 2e-22
PLN02596 490 PLN02596, PLN02596, hexokinase-like 2e-13
cd00012 185 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- 1e-05
>gnl|CDD|201171 pfam00349, Hexokinase_1, Hexokinase Back     alignment and domain information 
 Score =  169 bits (430), Expect = 2e-54
 Identities = 68/140 (48%), Positives = 86/140 (61%), Gaps = 3/140 (2%)

Query: 6   KIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKF 65
            I E      +S E LREV+ + +  + KGL K     A V   PT+V+  P G EKG F
Sbjct: 5   AIDELLNQFRVSTETLREVVKRFISEMEKGLSKEGGNLAAVPMLPTFVRSTPTGTEKGDF 64

Query: 66  LALDLGGTNFRVLIIYLEENH-FKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDN- 123
           LALDLGGTNFRVL++ L  N   +M    Y +P+++MTG+G QLFD IA+CL DFM +  
Sbjct: 65  LALDLGGTNFRVLLVKLTGNGKVEMTQSKYRLPEELMTGTGEQLFDFIADCLKDFMDEQF 124

Query: 124 -DVASERLPLGFTFSFPLTQ 142
                E LPLGFTFSFP +Q
Sbjct: 125 PLGKKEPLPLGFTFSFPCSQ 144

Hexokinase (EC:2.7.1.1) contains two structurally similar domains represented by this family and pfam03727. Some members of the family have two copies of each of these domains. Length = 205
>gnl|CDD|240270 PTZ00107, PTZ00107, hexokinase; Provisional Back     alignment and domain information
>gnl|CDD|227359 COG5026, COG5026, Hexokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215226 PLN02405, PLN02405, hexokinase Back     alignment and domain information
>gnl|CDD|178502 PLN02914, PLN02914, hexokinase Back     alignment and domain information
>gnl|CDD|215206 PLN02362, PLN02362, hexokinase Back     alignment and domain information
>gnl|CDD|178206 PLN02596, PLN02596, hexokinase-like Back     alignment and domain information
>gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 142
PF00349206 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexo 100.0
PLN02914 490 hexokinase 100.0
PLN02405 497 hexokinase 100.0
PLN02596 490 hexokinase-like 100.0
PLN02362 509 hexokinase 100.0
PTZ00107 464 hexokinase; Provisional 100.0
KOG1369|consensus 474 100.0
COG5026 466 Hexokinase [Carbohydrate transport and metabolism] 100.0
PF00370 245 FGGY_N: FGGY family of carbohydrate kinases, N-ter 97.27
PRK09698 302 D-allose kinase; Provisional 97.01
PRK13311 256 N-acetyl-D-glucosamine kinase; Provisional 96.94
smart0073299 YqgFc Likely ribonuclease with RNase H fold. YqgF 96.9
COG1940 314 NagC Transcriptional regulator/sugar kinase [Trans 96.88
PRK12408 336 glucokinase; Provisional 96.79
TIGR01314 505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 96.79
TIGR00744 318 ROK_glcA_fam ROK family protein (putative glucokin 96.63
PF00480 179 ROK: ROK family; InterPro: IPR000600 A family of b 96.63
PRK10939 520 autoinducer-2 (AI-2) kinase; Provisional 96.49
PRK13310 303 N-acetyl-D-glucosamine kinase; Provisional 96.49
PRK00292 316 glk glucokinase; Provisional 96.46
TIGR01311 493 glycerol_kin glycerol kinase. This model describes 96.39
TIGR01234 536 L-ribulokinase L-ribulokinase. This enzyme catalyz 96.37
PLN02295 512 glycerol kinase 96.3
PRK09557 301 fructokinase; Reviewed 96.3
PTZ00288 405 glucokinase 1; Provisional 96.25
TIGR01315 541 5C_CHO_kinase FGGY-family pentulose kinase. This m 96.21
PRK00047 498 glpK glycerol kinase; Provisional 96.18
PRK15027 484 xylulokinase; Provisional 96.16
COG1070 502 XylB Sugar (pentulose and hexulose) kinases [Carbo 96.0
PTZ00294 504 glycerol kinase-like protein; Provisional 95.99
PRK05082 291 N-acetylmannosamine kinase; Provisional 95.98
PRK10331 470 L-fuculokinase; Provisional 95.88
PRK14101 638 bifunctional glucokinase/RpiR family transcription 95.59
TIGR01312 481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 95.55
TIGR02628 465 fuculo_kin_coli L-fuculokinase. Members of this fa 95.51
PRK04123 548 ribulokinase; Provisional 95.2
PRK13321 256 pantothenate kinase; Reviewed 95.13
TIGR00749 316 glk glucokinase, proteobacterial type. This model 94.88
PF02685 316 Glucokinase: Glucokinase; InterPro: IPR003836 Gluc 93.8
PRK13318 258 pantothenate kinase; Reviewed 93.8
TIGR02627 454 rhamnulo_kin rhamnulokinase. This model describes 93.07
smart00842 187 FtsA Cell division protein FtsA. FtsA is essential 92.51
TIGR01175 348 pilM type IV pilus assembly protein PilM. This pro 91.28
PLN02669 556 xylulokinase 91.04
TIGR00241 248 CoA_E_activ CoA-substrate-specific enzyme activase 90.35
PF01869 271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 88.9
PRK13411 653 molecular chaperone DnaK; Provisional 87.92
TIGR02350 595 prok_dnaK chaperone protein DnaK. Members of this 87.77
TIGR01174 371 ftsA cell division protein FtsA. This bacterial ce 87.69
CHL00094 621 dnaK heat shock protein 70 87.59
PF00012 602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 87.47
PRK00290 627 dnaK molecular chaperone DnaK; Provisional 86.63
COG1069 544 AraB Ribulose kinase [Energy production and conver 86.16
PRK13410 668 molecular chaperone DnaK; Provisional 86.0
KOG2517|consensus 516 85.56
PTZ00186 657 heat shock 70 kDa precursor protein; Provisional 85.2
COG0837 320 Glk Glucokinase [Carbohydrate transport and metabo 83.83
PLN03184 673 chloroplast Hsp70; Provisional 81.1
PRK05183 616 hscA chaperone protein HscA; Provisional 81.09
>PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P) Back     alignment and domain information 
Probab=100.00  E-value=1.5e-49  Score=307.45  Aligned_cols=140  Identities=45%  Similarity=0.890  Sum_probs=125.4

Q ss_pred             hHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEe
Q psy6344           3 VRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYL   82 (142)
Q Consensus         3 ~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~L   82 (142)
                      ..+++++++++|.+|+++|++|+++|++||++||+++++..+.++||||||+.+|+|+|+|+|||||+|||||||++|+|
T Consensus         3 ~~~~v~~~~~~f~~s~~~L~~i~~~f~~em~~gL~~~~~~~~~l~MlPs~v~~~P~G~E~G~~LalDlGGTnlRv~~V~L   82 (206)
T PF00349_consen    3 LQQAVQKLLQQFTLSDEQLQEISDRFLEEMEKGLAKSSSSMSSLKMLPSYVTSLPTGNEKGDFLALDLGGTNLRVALVEL   82 (206)
T ss_dssp             HHHHHHHHHGGGS--HHHHHHHHHHHHHHHHHHHSTTTGCG-SS-EEEESEESSTTSTTEEEEEEEEESSSSEEEEEEEE
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHccCCCCceeeeccccccccCCCCCCCceEEEEeecCcEEEEEEEEE
Confidence            35789999999999999999999999999999999876444569999999999999999999999999999999999999


Q ss_pred             -cCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCC--CCCccceEEEEecccCC
Q psy6344          83 -EENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDV--ASERLPLGFTFSFPLTQ  142 (142)
Q Consensus        83 -g~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~--~~~~l~lGfTFSFP~~Q  142 (142)
                       |++.+++.+++|.||++++.+++++||||||+||++|+++++.  .++++++||||||||+|
T Consensus        83 ~g~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~f~~~~~~~~~~~~l~lGfTFSFP~~q  145 (206)
T PF00349_consen   83 SGNGKVEIEQEKYKIPEELMNGSGEELFDFIADCIAEFLKEHNLESRDEKLPLGFTFSFPVEQ  145 (206)
T ss_dssp             ESSSEEEEEEEEEE--HHHHTSBHHHHHHHHHHHHHHHHHHTTTTSTTSEEEEEEEEESSEEE
T ss_pred             cCCCCceeeeccccCChHHhcCCcccHHHHHHHHHHHHHHHhcccccccccceEEEEEEEEEe
Confidence             8778889999999999999999999999999999999998765  57899999999999987

The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF03727 from PFAM. Some hexokinases have two copies of each of these domains. This entry represents the N-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3O1W_A 3O6W_A 3O4W_B 3O08_B 3O80_A 3O5B_A 3O8M_A 3O1B_A 1BG3_A 4DHY_A ....
>PLN02914 hexokinase Back     alignment and domain information
>PLN02405 hexokinase Back     alignment and domain information
>PLN02596 hexokinase-like Back     alignment and domain information
>PLN02362 hexokinase Back     alignment and domain information
>PTZ00107 hexokinase; Provisional Back     alignment and domain information
>KOG1369|consensus Back     alignment and domain information
>COG5026 Hexokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>PRK09698 D-allose kinase; Provisional Back     alignment and domain information
>PRK13311 N-acetyl-D-glucosamine kinase; Provisional Back     alignment and domain information
>smart00732 YqgFc Likely ribonuclease with RNase H fold Back     alignment and domain information
>COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK12408 glucokinase; Provisional Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) Back     alignment and domain information
>PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames [] Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>PRK13310 N-acetyl-D-glucosamine kinase; Provisional Back     alignment and domain information
>PRK00292 glk glucokinase; Provisional Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>PRK09557 fructokinase; Reviewed Back     alignment and domain information
>PTZ00288 glucokinase 1; Provisional Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>PRK05082 N-acetylmannosamine kinase; Provisional Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>PRK13321 pantothenate kinase; Reviewed Back     alignment and domain information
>TIGR00749 glk glucokinase, proteobacterial type Back     alignment and domain information
>PF02685 Glucokinase: Glucokinase; InterPro: IPR003836 Glucokinases 2 Back     alignment and domain information
>PRK13318 pantothenate kinase; Reviewed Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>smart00842 FtsA Cell division protein FtsA Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>KOG2517|consensus Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>COG0837 Glk Glucokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query142
2nzt_A 902 Crystal Structure Of Human Hexokinase Ii Length = 9 1e-36
1dgk_N 917 Mutant Monomer Of Recombinant Human Hexokinase Type 7e-34
1cza_N 917 Mutant Monomer Of Recombinant Human Hexokinase Type 7e-34
1hkb_A 917 Crystal Structure Of Recombinant Human Brain Hexoki 7e-34
1hkc_A 917 Recombinant Human Hexokinase Type I Complexed With 7e-34
1bg3_A 918 Rat Brain Hexokinase Type I Complex With Glucose An 4e-32
4dch_A 473 Insights Into Glucokinase Activation Mechanism: Obs 1e-31
3f9m_A 470 Human Pancreatic Glucokinase In Complex With Glucos 1e-31
3s41_A 469 Glucokinase In Complex With Activator And Glucose L 1e-31
3qic_A 470 The Structure Of Human Glucokinase E339k Mutation L 1e-31
3fr0_A 455 Human Glucokinase In Complex With 2-Amino Benzamide 2e-31
1v4s_A 455 Crystal Structure Of Human Glucokinase Length = 455 2e-31
1v4t_A 451 Crystal Structure Of Human Glucokinase Length = 451 2e-31
3imx_A 455 Crystal Structure Of Human Glucokinase In Complex W 3e-31
1bdg_A 451 Hexokinase From Schistosoma Mansoni Complexed With 3e-29
3hm8_A 445 Crystal Structure Of The C-Terminal Hexokinase Doma 2e-28
3o08_A 485 Crystal Structure Of Dimeric Klhxk1 In Crystal Form 1e-23
3b8a_X 485 Crystal Structure Of Yeast Hexokinase Pi In Complex 8e-21
1ig8_A 486 Crystal Structure Of Yeast Hexokinase Pii With The 1e-16
>pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii Length = 902 Back     alignment and structure 
Iteration: 1

 Score =  148 bits (373), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 72/140 (51%), Positives = 97/140 (69%), Gaps = 3/140 (2%)
Query: 6   KIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKF 65
           K+ ++   + LSDE L E+  +    + KGL   T+  A VK  PT+V+  P+G E G+F
Sbjct: 7   KVDQYLYHMRLSDETLLEISKRFRKEMEKGLGATTHPTAAVKMLPTFVRSTPDGTEHGEF 66
Query: 66  LALDLGGTNFRVLIIYLEENHFK---MESKVYSIPQDIMTGSGTQLFDHIAECLADFMRD 122
           LALDLGGTNFRVL + + +N  +   ME+++Y+IP+DIM GSGTQLFDHIAECLA+FM  
Sbjct: 67  LALDLGGTNFRVLWVKVTDNGLQKVEMENQIYAIPEDIMRGSGTQLFDHIAECLANFMDK 126
Query: 123 NDVASERLPLGFTFSFPLTQ 142
             +  ++LPLGFTFSFP  Q
Sbjct: 127 LQIKDKKLPLGFTFSFPCHQ 146
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With Glucose And Adp In The Active Site Length = 917 Back     alignment and structure
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I Complexed With Glucose, Glucose-6-Phosphate, And Adp Length = 917 Back     alignment and structure
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase Type I Complexed With Glucose And Glucose-6-Phosphate Length = 917 Back     alignment and structure
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose And Phosphate Length = 917 Back     alignment and structure
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And Inhibitor Glucose-6-Phosphate Length = 918 Back     alignment and structure
>pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism: Observation Of Multiple Distinct Protein Conformations Length = 473 Back     alignment and structure
>pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And Activator Showing A Mobile Flap Length = 470 Back     alignment and structure
>pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose Length = 469 Back     alignment and structure
>pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation Length = 470 Back     alignment and structure
>pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide Activator Length = 455 Back     alignment and structure
>pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase Length = 455 Back     alignment and structure
>pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase Length = 451 Back     alignment and structure
>pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A Synthetic Activator Length = 455 Back     alignment and structure
>pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose Length = 451 Back     alignment and structure
>pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of Human Hk3 Length = 445 Back     alignment and structure
>pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I Length = 485 Back     alignment and structure
>pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With Glucose Length = 485 Back     alignment and structure
>pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct Amino Acid Sequence Length = 486 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query142
3f9m_A 470 Glucokinase; hexokinase IV, ATP-binding, diabetes 3e-45
1bdg_A 451 Hexokinase; phosphotransferase; HET: GLC; 2.60A {S 4e-45
1cza_N 917 Hexokinase type I; structurally homologous domains 3e-42
1cza_N 917 Hexokinase type I; structurally homologous domains 5e-39
3hm8_A 445 Hexokinase-3; glucose, glucose-6-phosphate, non-pr 3e-41
2yhx_A 457 Hexokinase B; transferase(phosphoryl,alcohol accep 7e-41
3o8m_A 485 Hexokinase; rnaseh-like fold, glycolysis, glucose 1e-38
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A* Length = 470 Back     alignment and structure
 Score =  152 bits (384), Expect = 3e-45
 Identities = 61/142 (42%), Positives = 95/142 (66%), Gaps = 5/142 (3%)

Query: 6   KIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKF 65
           K+ +   +  L +E L++VM ++   +++GL   T++EA VK  PTYV+  P G E G F
Sbjct: 20  KVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDF 79

Query: 66  LALDLGGTNFRVLIIYLEENH-----FKMESKVYSIPQDIMTGSGTQLFDHIAECLADFM 120
           L+LDLGGTNFRV+++ + E        K + ++YSIP+D MTG+   LFD+I+EC++DF+
Sbjct: 80  LSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFL 139

Query: 121 RDNDVASERLPLGFTFSFPLTQ 142
             + +  ++LPLGFTFSFP+  
Sbjct: 140 DKHQMKHKKLPLGFTFSFPVRH 161
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 Length = 451 Back     alignment and structure
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Length = 917 Back     alignment and structure
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Length = 917 Back     alignment and structure
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens} Length = 445 Back     alignment and structure
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A Length = 457 Back     alignment and structure
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* Length = 485 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query142
3f9m_A 470 Glucokinase; hexokinase IV, ATP-binding, diabetes 100.0
3hm8_A 445 Hexokinase-3; glucose, glucose-6-phosphate, non-pr 100.0
3o8m_A 485 Hexokinase; rnaseh-like fold, glycolysis, glucose 100.0
1bdg_A 451 Hexokinase; phosphotransferase; HET: GLC; 2.60A {S 100.0
1cza_N 917 Hexokinase type I; structurally homologous domains 100.0
2yhx_A 457 Hexokinase B; transferase(phosphoryl,alcohol accep 100.0
1cza_N 917 Hexokinase type I; structurally homologous domains 100.0
1z6r_A 406 MLC protein; transcriptional repressor, ROK family 97.82
1z05_A 429 Transcriptional regulator, ROK family; structural 97.76
2hoe_A 380 N-acetylglucosamine kinase; TM1224, structural gen 97.66
2qm1_A 326 Glucokinase; alpha-beta structure, putative helix- 97.52
1zc6_A 305 Probable N-acetylglucosamine kinase; NESG, Q7NU07_ 97.41
1woq_A 267 Inorganic polyphosphate/ATP-glucomannokinase; tran 97.38
2ch5_A 347 NAGK protein; transferase, N-acetylglucosamine, gl 97.27
4db3_A 327 Glcnac kinase, N-acetyl-D-glucosamine kinase; stru 97.16
2ap1_A 327 Putative regulator protein; zinc binding protein, 97.02
3ifr_A 508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 97.01
2p3r_A 510 Glycerol kinase; glycerol metabolism, allosteric r 97.01
3ll3_A 504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 96.96
2itm_A 484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 96.93
3g25_A 501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 96.89
4e1j_A 520 Glycerol kinase; structural genomics, PSI-biology, 96.88
3h3n_X 506 Glycerol kinase; ATP-binding, glycerol metabolism, 96.87
2yhw_A 343 Bifunctional UDP-N-acetylglucosamine 2-epimerase/N 96.82
3vgl_A 321 Glucokinase; ROK family, transferase; HET: BGC ANP 96.81
2dpn_A 495 Glycerol kinase; thermus thermophilus HB8, structu 96.8
2w40_A 503 Glycerol kinase, putative; closed conformation, ma 96.77
2e2o_A 299 Hexokinase; acetate and sugar kinases, HSP70, acti 96.73
3r8e_A 321 Hypothetical sugar kinase; ribonuclease H-like mot 96.71
3hz6_A 511 Xylulokinase; xylulose, structural genomic, chromo 96.66
2zf5_O 497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 96.63
3l0q_A 554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 96.61
2d4w_A 504 Glycerol kinase; alpha and beta protein, ribonucle 96.56
3ezw_A 526 Glycerol kinase; glycerol metabolism, allosteric r 96.52
3mcp_A 366 Glucokinase; structural genomics, joint center for 96.43
3htv_A 310 D-allose kinase, allokinase; NP_418508.1, structur 96.38
2aa4_A 289 Mannac kinase, putative N-acetylmannosamine kinase 96.36
3vov_A 302 Glucokinase, hexokinase; ROK, sugar kinase, transf 96.34
3jvp_A 572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 96.23
2q2r_A 373 Glucokinase 1, putative; ATPase hexose kinase fami 96.2
4htl_A 297 Beta-glucoside kinase; structural genomics, sugar 95.99
3h6e_A 482 Carbohydrate kinase, FGGY; novosphingobium aromati 95.92
2gup_A 292 ROK family protein; sugar kinase, streptococcus pn 95.85
3epq_A 302 Putative fructokinase; SCRK, ADP binding, PSI2, MC 95.77
2uyt_A 489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 95.6
1zbs_A 291 Hypothetical protein PG1100; alpha-beta protein., 95.44
1sz2_A 332 Glucokinase, glucose kinase; ATP-dependent, glucos 95.35
3i8b_A 515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 95.35
3lm2_A 226 Putative kinase; structural genomics, joint center 95.14
1zxo_A 291 Conserved hypothetical protein Q8A1P1; NESG, BTR25 94.71
3djc_A 266 Type III pantothenate kinase; structural genomics, 93.82
1saz_A 381 Probable butyrate kinase 2; askha (acetate and sug 92.98
3bex_A 249 Type III pantothenate kinase; actin-like fold, ATP 91.96
2h3g_X 268 Biosynthetic protein; pantothenate kinase, anthrax 88.47
4bc3_A 538 Xylulose kinase; transferase, glucuronate xyluloki 86.73
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 86.33
3qfu_A 394 78 kDa glucose-regulated protein homolog; HSP70, K 84.8
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 84.49
2kho_A 605 Heat shock protein 70; molecular chaperone, HSP70, 84.4
2ych_A 377 Competence protein PILM; cell cycle, type IV pilus 83.57
1hux_A 270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 83.03
1yuw_A 554 Heat shock cognate 71 kDa protein; chaperone; 2.60 81.64
2v7y_A 509 Chaperone protein DNAK; HSP70, heat shock protein, 81.53
3i33_A 404 Heat shock-related 70 kDa protein 2; protein-ADP c 80.8
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A* Back     alignment and structure
Probab=100.00  E-value=8.7e-49  Score=332.26  Aligned_cols=140  Identities=44%  Similarity=0.842  Sum_probs=130.8

Q ss_pred             hHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEe
Q psy6344           3 VRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYL   82 (142)
Q Consensus         3 ~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~L   82 (142)
                      ..+++++++++|.++.++|++|+++|.+||++||+++++.+|+++||||||+.+|+|+|+|+|||||+||||||||+|+|
T Consensus        17 ~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V~L   96 (470)
T 3f9m_A           17 KKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKV   96 (470)
T ss_dssp             HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEEEE
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEEEE
Confidence            45678999999999999999999999999999999887667999999999999999999999999999999999999999


Q ss_pred             -cCc----eEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecccCC
Q psy6344          83 -EEN----HFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ  142 (142)
Q Consensus        83 -g~~----~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP~~Q  142 (142)
                       |++    .+++.+++|.||+++|.+++++||||||+||++|+++++..++++||||||||||+|
T Consensus        97 ~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~~~~lpLGfTFSFP~~Q  161 (470)
T 3f9m_A           97 GEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRH  161 (470)
T ss_dssp             EC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCSSSCCEEEEEECSCEEE
T ss_pred             CCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhccccccccceEEEEeccccc
Confidence             665    688899999999999999999999999999999999987777889999999999997
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens} Back     alignment and structure
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* Back     alignment and structure
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 Back     alignment and structure
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Back     alignment and structure
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A Back     alignment and structure
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Back     alignment and structure
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A Back     alignment and structure
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} Back     alignment and structure
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} Back     alignment and structure
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis} Back     alignment and structure
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} Back     alignment and structure
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} Back     alignment and structure
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi} Back     alignment and structure
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens} Back     alignment and structure
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp} Back     alignment and structure
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A* Back     alignment and structure
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A Back     alignment and structure
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str} Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 142
d1bdga1208 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schis 2e-55
d1v4sa1205 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapie 3e-53
d1czan3205 c.55.1.3 (N:466-670) Mammalian type I hexokinase { 7e-53
d1czan1207 c.55.1.3 (N:16-222) Mammalian type I hexokinase {H 2e-52
d1ig8a1207 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Sac 1e-44
>d1bdga1 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} Length = 208 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Hexokinase
domain: Hexokinase
species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]

 Score =  170 bits (432), Expect = 2e-55
 Identities = 63/139 (45%), Positives = 90/139 (64%), Gaps = 2/139 (1%)

Query: 6   KIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKF 65
           K+ E  K   LS     E+  ++  ++  GL K+TN+++ +K FP+YV   PNG E G F
Sbjct: 9   KVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNF 68

Query: 66  LALDLGGTNFRVLIIYLEENH--FKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDN 123
           LALDLGGTN+RVL + LE      +++ + Y IP + M+GSGT+LF +IAE LADF+ +N
Sbjct: 69  LALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENN 128

Query: 124 DVASERLPLGFTFSFPLTQ 142
            +  ++  LGFTFSFP  Q
Sbjct: 129 GMKDKKFDLGFTFSFPCVQ 147
>d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 Back     information, alignment and structure
>d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 Back     information, alignment and structure
>d1czan1 c.55.1.3 (N:16-222) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 207 Back     information, alignment and structure
>d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} Length = 207 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query142
d1bdga1208 Hexokinase {Blood fluke (Schistosoma mansoni) [Tax 100.0
d1v4sa1205 Glucokinase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1czan3205 Mammalian type I hexokinase {Human (Homo sapiens) 100.0
d1czan1207 Mammalian type I hexokinase {Human (Homo sapiens) 100.0
d1ig8a1207 Hexokinase {Baker's yeast (Saccharomyces cerevisia 100.0
d2ap1a2117 Putative regulator protein YcfX {Salmonella typhim 98.17
d1woqa1129 Inorganic polyphosphate/ATP-glucomannokinase PPGMK 98.15
d1z6ra2129 Mlc protein {Escherichia coli [TaxId: 562]} 98.04
d2hoea3128 N-acetylglucosamine kinase {Thermotoga maritima [T 97.79
d1z05a3128 Transcriptional regulator VC2007 {Vibrio cholerae 97.75
d2aa4a1119 N-acetylmannosamine kinase NanK {Escherichia coli 97.74
d2gupa1114 Hypothetical protein SP2142 {Streptococcus pneumon 97.73
d1q18a1110 Glucokinase Glk {Escherichia coli [TaxId: 562]} 97.58
d1zc6a1114 Probable N-acetylglucosamine kinase CV2896 {Chromo 97.49
d1xc3a1118 Putative fructokinase YhdR {Bacillus subtilis [Tax 97.37
d1sz2a1 319 Glucokinase Glk {Escherichia coli [TaxId: 562]} 97.37
d2p3ra1 252 Glycerol kinase {Escherichia coli [TaxId: 562]} 97.13
d2ch5a2117 N-acetylglucosamine kinase, NAGK {Human (Homo sapi 95.35
d1huxa_ 259 Hydroxyglutaryl-CoA dehydratase component A {Acida 95.24
d1r59o1 252 Glycerol kinase {Enterococcus casseliflavus [TaxId 94.6
d2ewsa1 267 Type II pantothenate kinase, CoaW {Staphylococcus 93.03
d1e4ft1 193 Cell division protein FtsA {Thermotoga maritima [T 89.95
d1bupa2 193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 89.83
d1bupa1 185 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 85.68
d1dkgd2 198 Heat shock protein 70kDa, ATPase fragment {Escheri 84.72
>d1bdga1 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Hexokinase
domain: Hexokinase
species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]

Probab=100.00  E-value=7.9e-52  Score=317.29  Aligned_cols=140  Identities=44%  Similarity=0.749  Sum_probs=129.6

Q ss_pred             hHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEe
Q psy6344           3 VRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYL   82 (142)
Q Consensus         3 ~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~L   82 (142)
                      ..+++.+++++|.++.++|++|+++|.+||++||+++++.+|+++||||||+++|+|+|+|+|||||+|||||||++|+|
T Consensus         6 ~~~~v~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~l~Mlpt~v~~lPtG~E~G~fLalDlGGTn~Rv~~V~L   85 (208)
T d1bdga1           6 LFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSVTL   85 (208)
T ss_dssp             HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEE
T ss_pred             HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhcCCCCCccceeccccCCCCCCCccceEEEEEecCceEEEEEEEe
Confidence            45788999999999999999999999999999998755556999999999999999999999999999999999999999


Q ss_pred             -cCc-eEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecccCC
Q psy6344          83 -EEN-HFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ  142 (142)
Q Consensus        83 -g~~-~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP~~Q  142 (142)
                       |++ ...+.++.|.||++++.+++++||||||+||++|+++++..+..+||||||||||+|
T Consensus        86 ~g~~~~~~~~~~~~~ip~~~~~~~~~~lFd~iA~~i~~fl~~~~~~~~~l~lGfTFSFP~~Q  147 (208)
T d1bdga1          86 EGKGKSPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMKDKKFDLGFTFSFPCVQ  147 (208)
T ss_dssp             CC-CCCCEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCCSSCEEEEEEECSCEEE
T ss_pred             cCCCcceEEEEEEeeCCHHHccCCHHHHHHHHHHHHHHHHHhcCCCCCccccEEEEcCcccc
Confidence             654 456788999999999999999999999999999999988878899999999999987
>d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1czan1 c.55.1.3 (N:16-222) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} Back     information, alignment and structure
>d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} Back     information, alignment and structure
>d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure