Psyllid ID: psy6437

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
Protein Sequence
MLSRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVCTHLKNSSSNGKSDYFLSLRKHIITEKIEYDVN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHccccccccccHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcEEEEccc
Coil and Loop (DISEMBL)
mlsrailtnpdvqlktpvgdlfnndywgtpitspnshgsyrpltVLTFRLNYLacglkprsFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAvhpihteavsgIVGRADLLCTLFYLSTILIYIKWIKlggreqykYNIKISIMNKYnniychqattstynlcchekdsshtkkdtICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVcthlknsssngksdYFLSLRKHIITEKIEYDVN
Flexible Loop (DISEMBL)
mlsrailtnpdvqlktpvgDLFNNDYWGTpitspnshgsyRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDsshtkkdtiCAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVCTHLknsssngksdyflSLRKhiitekieydvn
Low Complexity Region (SEG)
MLSRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVCTHLKNSSSNGKSDYFLSLRKHIITEKIEYDVN
Disordered region (IsUnstruct)
**********DVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVCTHLKN******SDYFLSLRKHIITEKIE****
Disordered Region (DISOPRED)
*LSRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKV*************DYFLSLRKHIITE*IEYD**
Disordered Region (DISEMBL)
MLSRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVCTHLKNSSSNGKSDYFLSLRKHIITEKIEYDVN
Disordered Region (DISPRO)
*LSRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVCTHLKNSSSNGKSDYFLSLRKHIITEKIEYDVN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLSRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVCTHLKNSSSNGKSDYFLSLRKHIITEKIEYDVN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	254	2.2.26 [Sep-21-2011]
Q8BRH0	920	Transmembrane and TPR rep	yes	N/A	0.5	0.138	0.523	9e-35
Q9VQE9	859	Transmembrane and TPR rep	yes	N/A	0.5	0.147	0.527	3e-34
Q6ZXV5	915	Transmembrane and TPR rep	yes	N/A	0.5	0.138	0.523	5e-34
Q9V3X5	938	Transmembrane and TPR rep	no	N/A	0.677	0.183	0.389	4e-33
Q8BG19	741	Transmembrane and TPR rep	no	N/A	0.700	0.240	0.384	7e-33
Q5T4D3	741	Transmembrane and TPR rep	no	N/A	0.696	0.238	0.388	5e-29
Q6DCD5	836	Transmembrane and TPR rep	N/A	N/A	0.452	0.137	0.565	2e-28
Q8N394	836	Transmembrane and TPR rep	no	N/A	0.511	0.155	0.530	7e-28
Q56A06	836	Transmembrane and TPR rep	no	N/A	0.511	0.155	0.530	9e-28
Q3UV71	942	Transmembrane and TPR rep	no	N/A	0.748	0.201	0.356	6e-26

>sp|Q8BRH0|TMTC3_MOUSE Transmembrane and TPR repeat-containing protein 3 OS=Mus musculus GN=Tmtc3 PE=2 SV=2

 Score =  147 bits (370), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 67/128 (52%), Positives = 94/128 (73%), Gaps = 1/128 (0%)

Query: 5   AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
           AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   LKP S+HL
Sbjct: 40  AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 99

Query: 65  INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
           +N + H A+  ++++    +  ++R+ + A+L+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct: 100 LNTVFH-AVVSVIFLKVCRLFLDKRSSMIAALLFAVHPIHTEAVTGVVGRAELLSSVFFL 158

Query: 125 STILIYIK 132
           +  L Y K
Sbjct: 159 AAFLSYTK 166

Mus musculus (taxid: 10090)

>sp|Q9VQE9|TMTC1_DROME Transmembrane and TPR repeat-containing protein CG31690 OS=Drosophila melanogaster GN=CG31690 PE=2 SV=3

 Score =  145 bits (366), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/127 (52%), Positives = 88/127 (69%)

Query: 4   RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 63
           RAIL N DV    P+ +L  ND+WGTP+    SHGS+RPL VL+FRLNYLA G+ P  +H
Sbjct: 48  RAILANGDVTGARPLANLLRNDFWGTPLVDSGSHGSWRPLCVLSFRLNYLAGGMTPLGYH 107

Query: 64  LINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFY 123
           L+N +LH   T+LV++++  +LP+R   L A  +FAVHP HTEAV+G+VGRADL   + Y
Sbjct: 108 LVNVMLHCVATWLVFLVARTLLPSRMGVLAAGALFAVHPAHTEAVAGLVGRADLASCVCY 167

Query: 124 LSTILIY 130
           L   L Y
Sbjct: 168 LLAYLSY 174

Drosophila melanogaster (taxid: 7227)

>sp|Q6ZXV5|TMTC3_HUMAN Transmembrane and TPR repeat-containing protein 3 OS=Homo sapiens GN=TMTC3 PE=1 SV=2

 Score =  144 bits (364), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 67/128 (52%), Positives = 92/128 (71%), Gaps = 1/128 (0%)

Query: 5   AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
           AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   LKP S+HL
Sbjct: 35  AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 94

Query: 65  INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
           +N + H+ ++ +   +    L N ++ + ASL+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct: 95  LNMIFHAVVSVIFLKVCKLFLDN-KSSVIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 153

Query: 125 STILIYIK 132
           +  L Y +
Sbjct: 154 AAFLSYTR 161

Homo sapiens (taxid: 9606)

>sp|Q9V3X5|TMTC2_DROME Transmembrane and TPR repeat-containing protein CG4341 OS=Drosophila melanogaster GN=CG4341 PE=2 SV=1

 Score =  141 bits (356), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 85/218 (38%), Positives = 111/218 (50%), Gaps = 46/218 (21%)

Query: 4   RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYL-ACGLKPRSF 62
           RAIL N DV   TP    F+ND+WGTP+T   SHGS+RPL VL+FRLNYL   G  P  F
Sbjct: 60  RAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLCVLSFRLNYLIGGGFAPWGF 119

Query: 63  HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLF 122
           HL+NNLLH   T LV  ++  +L +  A L A  +FA HPIHTEAV+G+VGRADL   + 
Sbjct: 120 HLVNNLLHCVATALVVRVARTLLASVWAVLAAGALFAAHPIHTEAVAGVVGRADLAACVC 179

Query: 123 YLSTILIYI---KWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHT 179
           YL T L Y+   +W + G   Q+                                     
Sbjct: 180 YLLTYLSYLRHMRWRESGDPRQW------------------------------------- 202

Query: 180 KKDTICAVMRRTALAGAAMISKETGVTVLLICICIELL 217
                 A+     LA A ++ KET +T LL+C   +++
Sbjct: 203 -----LALGATLILAAAGLLCKETAITALLVCALFDVM 235

Drosophila melanogaster (taxid: 7227)

>sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing protein 4 OS=Mus musculus GN=Tmtc4 PE=2 SV=1

 Score =  140 bits (354), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 124/229 (54%), Gaps = 51/229 (22%)

Query: 3   SRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLN-YLACGLKPRS 61
           S AI+ N D+Q  TP+GDL+++D+WG+ ++S  SH SYRPLTVLTFR+N YL+ G  P  
Sbjct: 46  SEAIVNNKDLQSDTPLGDLWHHDFWGSKLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVG 105

Query: 62  FHLINNLLHSAITYLVYILSSYVLPN-------------RRARLFASLIFAVHPIHTEAV 108
           FH++N LLH +I+ L+  + S +                 RA L A+L+FAVHP+HTE V
Sbjct: 106 FHVVNILLHGSISILMLDVFSVLFGGLQYTGKGQRVHLAPRASLLATLLFAVHPVHTECV 165

Query: 109 SGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYN 168
           +G+VGRADLLC LF+L + L                             YC QA   T N
Sbjct: 166 AGVVGRADLLCALFFLLSFL----------------------------GYC-QAFKETGN 196

Query: 169 LCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELL 217
                K+ +H+   +   V+    L   AM+ KE G+TVL +    ++L
Sbjct: 197 -----KEGTHS---STFWVLLSIFLGAVAMLCKEQGITVLGLNAVFDIL 237

Mus musculus (taxid: 10090)

>sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing protein 4 OS=Homo sapiens GN=TMTC4 PE=2 SV=2

 Score =  128 bits (321), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/229 (38%), Positives = 124/229 (54%), Gaps = 52/229 (22%)

Query: 3   SRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLN-YLACGLKPRS 61
           S AI+ N D+Q +TP+GDL+++D+WG+ ++S  SH SYRPLTVLTFR+N YL+ G  P  
Sbjct: 47  SEAIVNNKDLQAETPLGDLWHHDFWGSRLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVG 106

Query: 62  FHLINNLLHSAITYLVYILSS-------YVLPNRR------ARLFASLIFAVHPIHTEAV 108
           FH++N LLHS I+ L+  + S       Y    RR      A L A+L+FAVHP+HTE V
Sbjct: 107 FHVVNILLHSGISVLMVDVFSVLFGGLQYTSKGRRLHLAPRASLLAALLFAVHPVHTECV 166

Query: 109 SGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYN 168
           +G+VGRADLLC LF+L + L Y K  +   +E                     A +ST+ 
Sbjct: 167 AGVVGRADLLCALFFLLSFLGYCKAFRESNKE--------------------GAHSSTF- 205

Query: 169 LCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELL 217
                             V+    L   AM+ KE G+TVL +    ++L
Sbjct: 206 -----------------WVLLSIFLGAVAMLCKEQGITVLGLNAVFDIL 237

Homo sapiens (taxid: 9606)

>sp|Q6DCD5|TMTC2_XENLA Transmembrane and TPR repeat-containing protein 2 OS=Xenopus laevis GN=tmtc2 PE=2 SV=1

 Score =  125 bits (315), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 79/115 (68%)

Query: 3   SRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSF 62
           SRAI TN D+  +TP   +F ND+WGT +T   SH SYRPL  L+FRLNYL  GL P ++
Sbjct: 28  SRAIKTNQDLLPETPWNHIFFNDFWGTLLTHSGSHKSYRPLCTLSFRLNYLFGGLDPWNY 87

Query: 63  HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADL 117
           HL+N LLHSA+T L   L   +  +    L A L+FA HPIHTEAVSGIVGRAD+
Sbjct: 88  HLVNVLLHSAVTGLFTNLCKALFGSGCWTLIAGLLFASHPIHTEAVSGIVGRADV 142

Xenopus laevis (taxid: 8355)

>sp|Q8N394|TMTC2_HUMAN Transmembrane and TPR repeat-containing protein 2 OS=Homo sapiens GN=TMTC2 PE=2 SV=1

 Score =  124 bits (311), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/130 (53%), Positives = 89/130 (68%)

Query: 3   SRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSF 62
           SRAI TN D+  +TP   +F ND+WGT +T   SH SYRPL  L+FRLN+   GL P S+
Sbjct: 28  SRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLNPWSY 87

Query: 63  HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLF 122
           HL+N LLH+A+T L    S  +L +      A L+FA HPIHTEAV+GIVGRAD+  +LF
Sbjct: 88  HLVNVLLHAAVTGLFTSFSKILLGDGYWTFMAGLMFASHPIHTEAVAGIVGRADVGASLF 147

Query: 123 YLSTILIYIK 132
           +L ++L YIK
Sbjct: 148 FLLSLLCYIK 157

Homo sapiens (taxid: 9606)

>sp|Q56A06|TMTC2_MOUSE Transmembrane and TPR repeat-containing protein 2 OS=Mus musculus GN=Tmtc2 PE=2 SV=1

 Score =  124 bits (310), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 69/130 (53%), Positives = 89/130 (68%)

Query: 3   SRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSF 62
           SRAI TN D+  +TP   +F ND+WGT +T   SH SYRPL  L+FRLN+   GL P S+
Sbjct: 28  SRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLNPWSY 87

Query: 63  HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLF 122
           HL+N LLH+A+T L    S  +L +      A L+FA HPIHTEAV+GIVGRAD+  +LF
Sbjct: 88  HLVNVLLHAAVTGLFTRFSKALLGDGYWTFMAGLMFASHPIHTEAVAGIVGRADVGASLF 147

Query: 123 YLSTILIYIK 132
           +L ++L YIK
Sbjct: 148 FLLSLLCYIK 157

Mus musculus (taxid: 10090)

>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus GN=Tmtc1 PE=2 SV=2

 Score =  117 bits (294), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 82/230 (35%), Positives = 113/230 (49%), Gaps = 40/230 (17%)

Query: 5   AILTNPDVQLKTPVG-DLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 63
           AI+ NPDV+  TP+   +F ND+WG  +    SH SYRPL VL+FRLN    G+ P  FH
Sbjct: 55  AIVNNPDVRPGTPLRWAIFANDFWGKGLADSTSHKSYRPLCVLSFRLNIFLTGMNPFYFH 114

Query: 64  LINNLLHSAITY-LVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLF 122
            +N +LH  +T  L+Y     V  NR      +L+FAVHP+HTEAV+GIVGRAD+L  L 
Sbjct: 115 AVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPVHTEAVAGIVGRADVLACLL 174

Query: 123 YLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKD 182
           +L   L Y + +  G   Q                 C   T S +               
Sbjct: 175 FLLAFLSYQRSLDQGCAGQ-----------------CFPTTASPF--------------- 202

Query: 183 TICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVCTHLKNSSSNG 232
               ++    L   AM+ KETG+TV  +C+  +L      +H ++  SNG
Sbjct: 203 ---FLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSP---SHKQDKLSNG 246

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	254
270005776	851	hypothetical protein TcasGA2_TC007885 [T	0.870	0.259	0.403	2e-36
328698735	822	PREDICTED: transmembrane and TPR repeat-	0.854	0.263	0.400	1e-35
189236217	913	PREDICTED: similar to AT30101p [Triboliu	0.661	0.184	0.407	3e-35
241998476	832	O-linked N-acetylglucosamine transferase	0.720	0.219	0.389	8e-35
427795289	927	Putative o-linked n-acetylglucosamine tr	0.708	0.194	0.376	7e-34
158299843	886	AGAP009112-PA [Anopheles gambiae str. PE	0.547	0.156	0.517	1e-33
354482924	921	PREDICTED: transmembrane and TPR repeat-	0.5	0.137	0.539	2e-33
344240174	916	Transmembrane and TPR repeat-containing	0.5	0.138	0.539	2e-33
417405241	915	Putative o-linked n-acetylglucosamine tr	0.5	0.138	0.546	2e-33
345482770	854	PREDICTED: transmembrane and TPR repeat-	0.503	0.149	0.565	3e-33

>gi|270005776|gb|EFA02224.1| hypothetical protein TcasGA2_TC007885 [Tribolium castaneum]

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/258 (40%), Positives = 141/258 (54%), Gaps = 37/258 (14%)

Query: 4   RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 63
           RAIL+NPD+  KTP   L  ND+WGTP++   SHGSYRPL VLTFRLNYL  G +P  +H
Sbjct: 224 RAILSNPDLLPKTPWARLLENDFWGTPLSDSGSHGSYRPLCVLTFRLNYLLGGFQPWGYH 283

Query: 64  LINNLLHSAITYLVYILSSYVLPNRRARL---FASLIFAVHPIHTEAVSGIVGRADLLCT 120
           L+N LLH   T L+  L+  VLP  ++ +      LIFA HPIHTEAV+G+VGRADL   
Sbjct: 284 LVNVLLHCLATALLVKLARQVLPKSKSSVGPAITGLIFATHPIHTEAVAGVVGRADLAAC 343

Query: 121 LFYLSTILIYIKWIK-------LGGREQYKYNIKISIMNKYNN-IYCHQATTSTYN---- 168
            FYL + L Y+   K        GG ++   N+K     KY   +Y  Q   ++ N    
Sbjct: 344 NFYLLSFLAYVTHTKHRDSFCCYGGNKE--DNMKQLRTLKYQKFVYSLQKNVTSCNWPKR 401

Query: 169 LCCHEKDSSHT-------KKDTICAVMRRTA----------LAGAAMISKETGVTVLLIC 211
           L   E  + +        +K+  C +  R            LA AAM+SKETG+TVL +C
Sbjct: 402 LGVSEACNKNVVFRMHLKEKNEACCLKSRVRQWMYLGLCILLALAAMLSKETGITVLGMC 461

Query: 212 ICIELLHNKVCTHLKNSS 229
           +  + ++   C  LK ++
Sbjct: 462 MIYDFIY---CPSLKKAT 476

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328698735|ref|XP_003240719.1| PREDICTED: transmembrane and TPR repeat-containing protein CG4341-like [Acyrthosiphon pisum]

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 99/247 (40%), Positives = 133/247 (53%), Gaps = 30/247 (12%)

Query: 3   SRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSF 62
           SRAI+ NPDV    P+ D++ ND+WGTPI S +SHGSYRPL V +FRLN+   GL P+ +
Sbjct: 5   SRAIVNNPDVTRAAPLTDIWTNDFWGTPIGSSSSHGSYRPLCVASFRLNHWTGGLDPKGY 64

Query: 63  HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLF 122
           H  N LLH A+TYLVY +   ++P RR    A+ +FAVHP+H EAV+G+VGRADLL  LF
Sbjct: 65  HAANVLLHCAVTYLVYAVYRTLMPGRRPAA-AAAVFAVHPVHAEAVAGVVGRADLLACLF 123

Query: 123 YLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNL------------- 169
           YL+  L Y   ++   R        +       +  CH+    TY L             
Sbjct: 124 YLAAFLCYAAHVRHRDRTPDPRRRVVCC-----DAGCHR---RTYRLGSAVRTVFAALGL 175

Query: 170 --CCHEKDSSHTKKDTICAVMRRTAL------AGAAMISKETGVTVLLICICIELLHNKV 221
             C  + D         CAV     L      A A+M++KETG+TVL +C   ++L    
Sbjct: 176 GTCSSDLDGLPGGVTECCAVREWACLAATVLMAAASMLAKETGLTVLAVCAVYDVLFASK 235

Query: 222 CTHLKNS 228
            +  KNS
Sbjct: 236 QSPNKNS 242

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189236217|ref|XP_971516.2| PREDICTED: similar to AT30101p [Tribolium castaneum]

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 92/226 (40%), Positives = 121/226 (53%), Gaps = 58/226 (25%)

Query: 4   RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 63
           RAIL+NPD+  KTP   L  ND+WGTP++   SHGSYRPL VLTFRLNYL  G +P  +H
Sbjct: 141 RAILSNPDLLPKTPWARLLENDFWGTPLSDSGSHGSYRPLCVLTFRLNYLLGGFQPWGYH 200

Query: 64  LINNLLHSAITYLVYILSSYVLPNRRARL---FASLIFAVHPIHTEAVSGIVGRADLLCT 120
           L+N LLH   T L+  L+  VLP  ++ +      LIFA HPIHTEAV+G+VGRADL   
Sbjct: 201 LVNVLLHCLATALLVKLARQVLPKSKSSVGPAITGLIFATHPIHTEAVAGVVGRADLAAC 260

Query: 121 LFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTK 180
            FYL + L Y+                                             +HTK
Sbjct: 261 NFYLLSFLAYV---------------------------------------------THTK 275

Query: 181 -KDTICAVMRR-------TALAGAAMISKETGVTVLLICICIELLH 218
            +D+ C  +R+         LA AAM+SKETG+TVL +C+  + ++
Sbjct: 276 HRDSFC--LRQWMYLGLCILLALAAMLSKETGITVLGMCMIYDFIY 319

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241998476|ref|XP_002433881.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes scapularis] gi|215495640|gb|EEC05281.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes scapularis]

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 85/218 (38%), Positives = 123/218 (56%), Gaps = 35/218 (16%)

Query: 3   SRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSF 62
           SRAI +N D+   +P+  LF ND+WGTP+T   SH SYRPL VL+FRLNYL  G +PR +
Sbjct: 1   SRAIRSNQDLLPSSPLASLFRNDFWGTPLTHSGSHKSYRPLCVLSFRLNYLLGGYEPRGY 60

Query: 63  HLINNLLHSAITYLVYILSSYV-LPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTL 121
           HL+N LLH+  + L   L+S + L   R  L A L+FA HP+HTEAV+GIVGRAD+   L
Sbjct: 61  HLLNVLLHAVASALFTALASRLFLRQWRPTLLAGLLFASHPVHTEAVAGIVGRADVGACL 120

Query: 122 FYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKK 181
           F+L+ +L Y+++ K   ++                                  D+S  ++
Sbjct: 121 FFLAALLSYMQYCKYRDKD--------------------------------PGDASFQRR 148

Query: 182 DTICAVMRRTALAGAAMISKETGVTVLLICICIELLHN 219
             +  +    ALAG +M++KE G+TVL +C   ++  N
Sbjct: 149 WVLLYL--SLALAGCSMLTKEHGITVLAVCAVYDVFIN 184

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427795289|gb|JAA63096.1| Putative o-linked n-acetylglucosamine transferase ogt, partial [Rhipicephalus pulchellus]

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 82/218 (37%), Positives = 120/218 (55%), Gaps = 38/218 (17%)

Query: 3   SRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSF 62
           SRAI +N D+   +P+  LF ND+WGTP+T   SH SYRPL VL+FRLNYL  G +PR +
Sbjct: 62  SRAIRSNQDLLPSSPLTSLFRNDFWGTPLTHSGSHKSYRPLCVLSFRLNYLLGGYEPRGY 121

Query: 63  HLINNLLHSAITYLVYILSSYVLPNR-RARLFASLIFAVHPIHTEAVSGIVGRADLLCTL 121
           HL+N LLH  ++ L   L++ +  N+    L A  +FA HP+HTEAV+GIVGRAD+   L
Sbjct: 122 HLLNVLLHGLVSALFTALAARLFLNQWLPTLVAGFLFASHPVHTEAVAGIVGRADVGACL 181

Query: 122 FYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKK 181
           F+L ++L Y+++ K   +E       +    ++  +Y                       
Sbjct: 182 FFLGSLLAYVQYCKYRDKE-------VHAERRWAPLYA---------------------- 212

Query: 182 DTICAVMRRTALAGAAMISKETGVTVLLICICIELLHN 219
                     ALAG +M++KE G+TVL +C   ++  N
Sbjct: 213 --------SLALAGCSMLTKEHGITVLGVCAVYDVFVN 242

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158299843|ref|XP_319863.4| AGAP009112-PA [Anopheles gambiae str. PEST] gi|157013713|gb|EAA14710.5| AGAP009112-PA [Anopheles gambiae str. PEST]

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 74/143 (51%), Positives = 95/143 (66%), Gaps = 4/143 (2%)

Query: 4   RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 63
           RAIL NPDV        + +ND+WGTP+    SHGSYRPL V +F+LNYL  G KP  +H
Sbjct: 1   RAILGNPDVLGTGSWSQMLHNDFWGTPLVDSGSHGSYRPLCVASFKLNYLLDGFKPFGYH 60

Query: 64  LINNLLHSAITYLVYILSSYVLPNRRARL-FASLIFAVHPIHTEAVSGIVGRADLLCTLF 122
           L+N LLHS  T LV  L+ ++LP  R+ +  A L+FA HPIHTEAV+G+VGRADL   +F
Sbjct: 61  LVNVLLHSLATGLVVKLARHLLPAGRSGVAIAGLLFAAHPIHTEAVAGVVGRADLTGCIF 120

Query: 123 YLSTILIYI---KWIKLGGREQY 142
           YL  +L YI   +W + G R Q+
Sbjct: 121 YLLALLAYIRHVRWRQWGDRRQW 143

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|354482924|ref|XP_003503645.1| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Cricetulus griseus]

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/128 (53%), Positives = 94/128 (73%), Gaps = 1/128 (0%)

Query: 5   AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
           AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   LKP S+HL
Sbjct: 40  AILDNKDLHPSTPIKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 99

Query: 65  INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
           +N + H AI  +V++    +  ++R+ + A+L+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct: 100 LNTVFH-AIVSVVFLKVCKLFLDKRSSVIAALLFAVHPIHTEAVTGVVGRAELLSSVFFL 158

Query: 125 STILIYIK 132
           +  L Y K
Sbjct: 159 AAFLSYTK 166

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|344240174|gb|EGV96277.1| Transmembrane and TPR repeat-containing protein 3 [Cricetulus griseus]

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/128 (53%), Positives = 94/128 (73%), Gaps = 1/128 (0%)

Query: 5   AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
           AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   LKP S+HL
Sbjct: 35  AILDNKDLHPSTPIKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 94

Query: 65  INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
           +N + H AI  +V++    +  ++R+ + A+L+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct: 95  LNTVFH-AIVSVVFLKVCKLFLDKRSSVIAALLFAVHPIHTEAVTGVVGRAELLSSVFFL 153

Query: 125 STILIYIK 132
           +  L Y K
Sbjct: 154 AAFLSYTK 161

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|417405241|gb|JAA49338.1| Putative o-linked n-acetylglucosamine transferase ogt [Desmodus rotundus]

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/128 (54%), Positives = 92/128 (71%), Gaps = 1/128 (0%)

Query: 5   AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
           AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   LKP S+HL
Sbjct: 35  AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELKPMSYHL 94

Query: 65  INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
           +N + H+ ++ L   +    L N R+ + ASL+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct: 95  LNTIFHAVVSVLFLKVCKLFLDN-RSSVIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 153

Query: 125 STILIYIK 132
           +  L Y K
Sbjct: 154 AAFLSYTK 161

Source: Desmodus rotundus

Species: Desmodus rotundus

Genus: Desmodus

Family: Phyllostomidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|345482770|ref|XP_001599238.2| PREDICTED: transmembrane and TPR repeat-containing protein CG4341-like [Nasonia vitripennis]

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 73/129 (56%), Positives = 90/129 (69%), Gaps = 1/129 (0%)

Query: 4   RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 63
           RAILTN D++  TP   L  ND+WGTP+    SHGSYRPL V T+RLNYL  GL+P  +H
Sbjct: 30  RAILTNADLKPSTPWYRLLENDFWGTPLRERGSHGSYRPLCVATYRLNYLLGGLEPLGYH 89

Query: 64  LINNLLHSAITYLVYILSSYVLPNRR-ARLFASLIFAVHPIHTEAVSGIVGRADLLCTLF 122
           L+N LLH+  T LV  ++  VLP +R A+  A L+FAVHPIH+EAV+GIVGRADLL  LF
Sbjct: 90  LVNVLLHALCTALVVRIAKKVLPGQRLAQAIAGLLFAVHPIHSEAVAGIVGRADLLACLF 149

Query: 123 YLSTILIYI 131
                L Y+
Sbjct: 150 AQGAFLFYV 158

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	254
UNIPROTKB|F1SPX9	650	TMTC3 "Uncharacterized protein	0.5	0.195	0.539	2.2e-35
UNIPROTKB|E2QUG9	915	TMTC3 "Uncharacterized protein	0.645	0.179	0.440	1.6e-34
MGI|MGI:3036255	920	Tmtc3 "transmembrane and tetra	0.5	0.138	0.515	2.1e-34
UNIPROTKB|Q6ZXV5	915	TMTC3 "Transmembrane and TPR r	0.5	0.138	0.523	5.5e-34
UNIPROTKB|E1BG63	920	TMTC3 "Uncharacterized protein	0.5	0.138	0.515	7.2e-34
FB|FBgn0028481	938	CG4341 [Drosophila melanogaste	0.547	0.148	0.517	8.4e-34
UNIPROTKB|Q5T4D3	741	TMTC4 "Transmembrane and TPR r	0.543	0.186	0.5	1.1e-33
MGI|MGI:1921050	741	Tmtc4 "transmembrane and tetra	0.547	0.187	0.470	1.1e-32
RGD|1306351	920	Tmtc3 "transmembrane and tetra	0.645	0.178	0.422	4.1e-32
UNIPROTKB|E1C3P5	921	TMTC3 "Uncharacterized protein	0.5	0.137	0.507	1e-31

UNIPROTKB|F1SPX9 TMTC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 363 (132.8 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
 Identities = 69/128 (53%), Positives = 92/128 (71%)

Query:     5 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
             AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   LKP S+HL
Sbjct:    40 AILDNKDLHPTTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELKPMSYHL 99

Query:    65 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
             +N + H+ ++ +   +    L NR + + ASL+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct:   100 LNMMFHAVVSVIFLKVCKLFLDNRSS-MIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 158

Query:   125 STILIYIK 132
             +  L Y K
Sbjct:   159 AAFLSYTK 166

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

UNIPROTKB|E2QUG9 TMTC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 365 (133.5 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
 Identities = 74/168 (44%), Positives = 105/168 (62%)

Query:     5 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
             AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   LKP S+HL
Sbjct:    35 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELKPMSYHL 94

Query:    65 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
             +N + H+ ++ +   +    L NR + + ASL+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct:    95 LNMIFHAVVSVIFLKVCKLFLDNRSS-MIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 153

Query:   125 STILIYIKWIKLGGREQYKYN-IKISIMNKYNNIYCHQATTSTYNLCC 171
             +  L Y K    G      +  I ++++       C +   +   +CC
Sbjct:   154 AAFLSYTK--SKGPDNSIVWTPIALTVVLVAIATLCKEQGITVVGICC 199

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

MGI|MGI:3036255 Tmtc3 "transmembrane and tetratricopeptide repeat containing 3" [Mus musculus (taxid:10090)]

 Score = 362 (132.5 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
 Identities = 66/128 (51%), Positives = 95/128 (74%)

Query:     5 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
             AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   LKP S+HL
Sbjct:    40 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 99

Query:    65 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
             +N + H+ ++ ++++    +  ++R+ + A+L+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct:   100 LNTVFHAVVS-VIFLKVCRLFLDKRSSMIAALLFAVHPIHTEAVTGVVGRAELLSSVFFL 158

Query:   125 STILIYIK 132
             +  L Y K
Sbjct:   159 AAFLSYTK 166

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0009791 "post-embryonic development" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=IMP

GO:0030324 "lung development" evidence=IMP

GO:0048286 "lung alveolus development" evidence=IMP

GO:0048747 "muscle fiber development" evidence=IMP

GO:0060447 "bud outgrowth involved in lung branching" evidence=IMP

UNIPROTKB|Q6ZXV5 TMTC3 "Transmembrane and TPR repeat-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 358 (131.1 bits), Expect = 5.5e-34, Sum P(2) = 5.5e-34
 Identities = 67/128 (52%), Positives = 92/128 (71%)

Query:     5 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
             AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   LKP S+HL
Sbjct:    35 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 94

Query:    65 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
             +N + H+ ++ +   +    L N+ + + ASL+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct:    95 LNMIFHAVVSVIFLKVCKLFLDNKSS-VIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 153

Query:   125 STILIYIK 132
             +  L Y +
Sbjct:   154 AAFLSYTR 161

GO:0016021 "integral to membrane" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

UNIPROTKB|E1BG63 TMTC3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 357 (130.7 bits), Expect = 7.2e-34, Sum P(2) = 7.2e-34
 Identities = 66/128 (51%), Positives = 93/128 (72%)

Query:     5 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
             AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   L P S+HL
Sbjct:    40 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELTPMSYHL 99

Query:    65 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
             +N + H+ ++ ++++    +  N ++ + ASL+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct:   100 LNMIFHAVVS-VIFLKVCRLFLNNQSSMIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 158

Query:   125 STILIYIK 132
             +  L Y K
Sbjct:   159 AAFLSYTK 166

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

FB|FBgn0028481 CG4341 [Drosophila melanogaster (taxid:7227)]

 Score = 344 (126.2 bits), Expect = 8.4e-34, Sum P(2) = 8.4e-34
 Identities = 74/143 (51%), Positives = 92/143 (64%)

Query:     4 RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYL-ACGLKPRSF 62
             RAIL N DV   TP    F+ND+WGTP+T   SHGS+RPL VL+FRLNYL   G  P  F
Sbjct:    60 RAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLCVLSFRLNYLIGGGFAPWGF 119

Query:    63 HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLF 122
             HL+NNLLH   T LV  ++  +L +  A L A  +FA HPIHTEAV+G+VGRADL   + 
Sbjct:   120 HLVNNLLHCVATALVVRVARTLLASVWAVLAAGALFAAHPIHTEAVAGVVGRADLAACVC 179

Query:   123 YLSTILIYIK---WIKLGGREQY 142
             YL T L Y++   W + G   Q+
Sbjct:   180 YLLTYLSYLRHMRWRESGDPRQW 202

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q5T4D3 TMTC4 "Transmembrane and TPR repeat-containing protein 4" [Homo sapiens (taxid:9606)]

 Score = 353 (129.3 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 76/152 (50%), Positives = 102/152 (67%)

Query:     3 SRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNY-LACGLKPRS 61
             S AI+ N D+Q +TP+GDL+++D+WG+ ++S  SH SYRPLTVLTFR+NY L+ G  P  
Sbjct:    47 SEAIVNNKDLQAETPLGDLWHHDFWGSRLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVG 106

Query:    62 FHLINNLLHSAITYL-VYILS------SYVLPNRR------ARLFASLIFAVHPIHTEAV 108
             FH++N LLHS I+ L V + S       Y    RR      A L A+L+FAVHP+HTE V
Sbjct:   107 FHVVNILLHSGISVLMVDVFSVLFGGLQYTSKGRRLHLAPRASLLAALLFAVHPVHTECV 166

Query:   109 SGIVGRADLLCTLFYLSTILIYIKWIKLGGRE 140
             +G+VGRADLLC LF+L + L Y K  +   +E
Sbjct:   167 AGVVGRADLLCALFFLLSFLGYCKAFRESNKE 198

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1921050 Tmtc4 "transmembrane and tetratricopeptide repeat containing 4" [Mus musculus (taxid:10090)]

 Score = 340 (124.7 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
 Identities = 72/153 (47%), Positives = 101/153 (66%)

Query:     3 SRAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNY-LACGLKPRS 61
             S AI+ N D+Q  TP+GDL+++D+WG+ ++S  SH SYRPLTVLTFR+NY L+ G  P  
Sbjct:    46 SEAIVNNKDLQSDTPLGDLWHHDFWGSKLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVG 105

Query:    62 FHLINNLLHSAITYLVYILSSYVLPNR-------------RARLFASLIFAVHPIHTEAV 108
             FH++N LLH +I+ L+  + S +                 RA L A+L+FAVHP+HTE V
Sbjct:   106 FHVVNILLHGSISILMLDVFSVLFGGLQYTGKGQRVHLAPRASLLATLLFAVHPVHTECV 165

Query:   109 SGIVGRADLLCTLFYLSTILIYIKWIKLGGREQ 141
             +G+VGRADLLC LF+L + L Y +  K  G ++
Sbjct:   166 AGVVGRADLLCALFFLLSFLGYCQAFKETGNKE 198

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1306351 Tmtc3 "transmembrane and tetratricopeptide repeat containing 3" [Rattus norvegicus (taxid:10116)]

 Score = 362 (132.5 bits), Expect = 4.1e-32, P = 4.1e-32
 Identities = 71/168 (42%), Positives = 107/168 (63%)

Query:     5 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
             AIL N D+   TP+  LF ND+WGTP++   SH SYRPLTVLTFRLNYL   LKP S+HL
Sbjct:    40 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 99

Query:    65 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
             +N + H+ ++ ++++    +  ++R  + A+L+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct:   100 LNTVFHAVVS-VIFLKVCRLFLDKRGSVIAALLFAVHPIHTEAVTGVVGRAELLSSVFFL 158

Query:   125 STILIYIKWIKLGGREQYKYN-IKISIMNKYNNIYCHQATTSTYNLCC 171
             +  L Y K    G      +  I ++++       C +   +   +CC
Sbjct:   159 AAFLSYTK--SKGPDNSIVWTPIALTVLLVAVATLCKEQGITVVGICC 204

GO:0009791 "post-embryonic development" evidence=IEA;ISO

GO:0010468 "regulation of gene expression" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=ISO

GO:0030324 "lung development" evidence=ISO

GO:0048286 "lung alveolus development" evidence=IEA;ISO

GO:0048747 "muscle fiber development" evidence=IEA;ISO

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA;ISO

UNIPROTKB|E1C3P5 TMTC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 337 (123.7 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
 Identities = 65/128 (50%), Positives = 88/128 (68%)

Query:     5 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 64
             AIL N D+   TP+ +LF ND+WGTP++   SH SYRPLTVLTFRLNYL   L   S+H 
Sbjct:    35 AILDNKDLHPSTPLKNLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELNAVSYHF 94

Query:    65 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYL 124
             +N + H  +  +   +    L N+ + + ASL+FAVHPIHTEAV+G+VGRA+LL ++F+L
Sbjct:    95 LNLIFHGVVCVVFLKVCKLFLDNQSS-IVASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 153

Query:   125 STILIYIK 132
             +  L Y K
Sbjct:   154 AAFLSYTK 161

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VQE9	TMTC1_DROME	No assigned EC number	0.5275	0.5	0.1478	yes	N/A
Q6ZXV5	TMTC3_HUMAN	No assigned EC number	0.5234	0.5	0.1387	yes	N/A
Q8BRH0	TMTC3_MOUSE	No assigned EC number	0.5234	0.5	0.1380	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	254
PF13231	159	PMT_2: Dolichyl-phosphate-mannose-protein mannosyl	99.24
PF02366	245	PMT: Dolichyl-phosphate-mannose-protein mannosyltr	98.78
TIGR03663	439	conserved hypothetical protein TIGR03663. Members	98.52
PRK13279	552	arnT 4-amino-4-deoxy-L-arabinose transferase; Prov	98.35
COG1807	535	ArnT 4-amino-4-deoxy-L-arabinose transferase and r	98.07
TIGR03766	483	conserved hypothetical integral membrane protein.	97.7
PF11028	178	DUF2723: Protein of unknown function (DUF2723); In	97.5
PF10131	616	PTPS_related: 6-pyruvoyl-tetrahydropterin synthase	96.91
COG5617	801	Predicted integral membrane protein [Function unkn	96.65
PF09852	449	DUF2079: Predicted membrane protein (DUF2079); Int	96.61
PF04188	443	Mannosyl_trans2: Mannosyltransferase (PIG-V)); Int	96.13
COG1928	699	PMT1 Dolichyl-phosphate-mannose--protein O-mannosy	96.08
KOG3359|consensus	723		95.51
COG4745	556	Predicted membrane-bound mannosyltransferase [Post	95.1
COG4346	438	Predicted membrane-bound dolichyl-phosphate-mannos	94.63
PF14264	319	Glucos_trans_II: Glucosyl transferase GtrII	94.41
COG5305	552	Predicted membrane protein [Function unknown]	93.88
PF09594	241	DUF2029: Protein of unknown function (DUF2029); In	92.6
TIGR03459	470	crt_membr carotene biosynthesis associated membran	92.35
KOG2647|consensus	444		91.73
PF02516	483	STT3: Oligosaccharyl transferase STT3 subunit; Int	91.59
COG5542	420	Predicted integral membrane protein [Function unkn	89.17
COG1287	773	Uncharacterized membrane protein, required for N-l	87.06
PF09913	389	DUF2142: Predicted membrane protein (DUF2142); Int	85.06

>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase

Probab=99.24  E-value=6.3e-10  Score=89.73  Aligned_cols=130  Identities=25%  Similarity=0.349  Sum_probs=112.0

Q ss_pred             chhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHH
Q psy6437          41 RPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCT  120 (254)
Q Consensus        41 RPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~  120 (254)
                      -|+..+..+.-+.++|.+++..|+.|.+.+.+....+|.+.|++++ +..|.+++++++.-|....-..  ..+.|.+..
T Consensus         3 pPl~~~~~~~~~~l~G~~~~~~~~~~~l~~~~~~~~~y~i~r~~~~-~~~a~~~~l~~~~~p~~~~~~~--~~~~~~~~~   79 (159)
T PF13231_consen    3 PPLYFLLLALFFKLFGDSVWALRLFNILFSLLTLLLIYLIARRLFG-RRAALIAALLLALSPMFIFYSA--SARPDMLLL   79 (159)
T ss_pred             ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-chHHHHHHHHHHHhHHHHHHHH--HHhHHHHHH
Confidence            4888888899999999999999999999999999999999999988 5689999999999997765544  577799999


Q ss_pred             HHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHhh
Q psy6437         121 LFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMIS  200 (254)
Q Consensus       121 lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlLS  200 (254)
                      +|.+++++.+.++.++++                                             +.+..++.++..+++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~l~~~l~~~~  114 (159)
T PF13231_consen   80 FFFLLALYAFYRYIKSKK---------------------------------------------WRWWILAGLLLGLAFLT  114 (159)
T ss_pred             HHHHHHHHHHHHHHhhcc---------------------------------------------hHHHHHHHHHHHHHHHH
Confidence            999999999999987542                                             12446788889999999


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q psy6437         201 KETGVTVLLICICIELLH  218 (254)
Q Consensus       201 KE~aI~lp~~~~l~d~~~  218 (254)
                      |++++.+++.++++.++.
T Consensus       115 k~~~~~~~~~~~~~l~~~  132 (159)
T PF13231_consen  115 KYTFLLLIPALLLYLLLS  132 (159)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999998877766555

>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.78  E-value=1.9e-07  Score=82.63  Aligned_cols=140  Identities=19%  Similarity=0.300  Sum_probs=109.7

Q ss_pred             ccchhHhHHhHHHHHhcC-CCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhH
Q psy6437          39 SYRPLTVLTFRLNYLACG-LKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADL  117 (254)
Q Consensus        39 ~yRPL~~lsf~l~~~l~G-~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~l  117 (254)
                      .|.|.....-...++.+| .+.+..++.|.+.=++...++|.+.|++.+++..|++++++++..|....--.  ....|.
T Consensus        61 ~~p~~~~~~~~~~~~~~~~~~~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr--~~~~D~  138 (245)
T PF02366_consen   61 GYPPLYYWISAIGFYYFGSVNYWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSR--YALLDS  138 (245)
T ss_pred             cccchhhHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHH--HHhhHH
Confidence            467777776677777888 89999999999999999999999999999988999999999999998764422  366789


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHH
Q psy6437         118 LCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAA  197 (254)
Q Consensus       118 La~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lA  197 (254)
                      ...+|.+++++++.++.+.+..                                        +.+.+.|.+++.++..+|
T Consensus       139 ~l~~f~~la~~~~~~~~~~~~~----------------------------------------~~~~~~~~~l~gi~lGla  178 (245)
T PF02366_consen  139 ILLFFILLAIYCLLRWYRYQPF----------------------------------------RRKWWLWLLLAGIALGLA  178 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhcccc----------------------------------------ccccHHHHHHHHHHHHHH
Confidence            9999999999999999622111                                        123456788899999999


Q ss_pred             HhhHHHHHHHH---HHHHHHHHHhhc
Q psy6437         198 MISKETGVTVL---LICICIELLHNK  220 (254)
Q Consensus       198 lLSKE~aI~lp---~~~~l~d~~~~~  220 (254)
                      +++|.+++.+.   +++.+++++..+
T Consensus       179 ~~~K~~~~~~~~~~~~~~~~~l~~~~  204 (245)
T PF02366_consen  179 ILTKGPGLLLVLPAGLLFLWLLWRKR  204 (245)
T ss_pred             HHhchhHHHHHHHHHHHHHHHHHHHh
Confidence            99999988543   233345555433

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane

>TIGR03663 conserved hypothetical protein TIGR03663

Probab=98.52  E-value=4.1e-06  Score=81.74  Aligned_cols=120  Identities=18%  Similarity=0.228  Sum_probs=98.4

Q ss_pred             hhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHHH
Q psy6437          42 PLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTL  121 (254)
Q Consensus        42 PL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~l  121 (254)
                      |+....-++-+.+||.+-+..++...+.-++ ..+++.+.++.++++ .++++|++.+..|...-  ..-..|.|.+..+
T Consensus        53 Pll~wl~A~~~~lFG~se~a~RL~~aL~g~~-v~l~~~~~r~~~~~~-~al~AAllla~sp~~~~--~sr~~~~D~~l~~  128 (439)
T TIGR03663        53 PFLYHITAAVFHLFGISDATARLLPAVFGVL-LPLTAWLYRKRLGDN-EVLWAAVLLAFSPVMVY--YSRFMRNDIFVAF  128 (439)
T ss_pred             CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHcCcH-HHHHHHHHHHHhHHHHH--HHHHHhHHHHHHH
Confidence            7766666778999999999999999999944 677888888887654 89999999999999853  2345889999999


Q ss_pred             HHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHhhH
Q psy6437         122 FYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISK  201 (254)
Q Consensus       122 F~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlLSK  201 (254)
                      |.++++++++++.++++                                             ..|.+++.+++.+|+++|
T Consensus       129 f~~lal~~l~r~~~~~~---------------------------------------------~~~~~lag~~~gLa~ltK  163 (439)
T TIGR03663       129 FTLLAVGAAFRYLDTGK---------------------------------------------RRYLFLAASALALAFTSK  163 (439)
T ss_pred             HHHHHHHHHHHHHHcCC---------------------------------------------hHHHHHHHHHHHHHHHHH
Confidence            99999999999875431                                             247788889999999999


Q ss_pred             HHHHHHHHH
Q psy6437         202 ETGVTVLLI  210 (254)
Q Consensus       202 E~aI~lp~~  210 (254)
                      +++..+++.
T Consensus       164 g~~~l~~~~  172 (439)
T TIGR03663       164 ENAYLIILI  172 (439)
T ss_pred             HHHHHHHHH
Confidence            998876644

Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.

>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional

Probab=98.35  E-value=2.6e-05  Score=78.43  Aligned_cols=132  Identities=15%  Similarity=0.122  Sum_probs=98.0

Q ss_pred             cchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHH
Q psy6437          40 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLC  119 (254)
Q Consensus        40 yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa  119 (254)
                      .-|+..-.-++-+.+||.+.++.++.|.+...+..+++|.+.+++.+++..|++++++++.-|.-... +- ....|.+.
T Consensus        62 KPPL~yWl~Als~~LFG~~~~a~RLpsaL~~~lt~llvy~larrl~~~r~~AllAaLIlls~~~v~~~-g~-~a~~D~~l  139 (552)
T PRK13279         62 KPIAGYWINSIGQWLFGDNNFGVRFGSVFSTLLSALLVYWLALRLWRDRRTALLAALIYLSLFLVYGI-GT-YAVLDPMI  139 (552)
T ss_pred             CCcHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-HH-HHhhhHHH
Confidence            45777777778899999999999999999999999999999999998877899999998877653321 11 24668888


Q ss_pred             HHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHh
Q psy6437         120 TLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMI  199 (254)
Q Consensus       120 ~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlL  199 (254)
                      ++|..++++++....+.++++                                         +++.++++..+++.+|+|
T Consensus       140 ~~fi~lal~~f~~~~~~~~~~-----------------------------------------~~~~~~lllGla~Glg~L  178 (552)
T PRK13279        140 TLWLTAAMCSFWLALQAQTRR-----------------------------------------GKIGGYLLLGLACGMGFM  178 (552)
T ss_pred             HHHHHHHHHHHHHHHHccccc-----------------------------------------chHHHHHHHHHHHHHHHH
Confidence            999999987776665543211                                         122334444566789999


Q ss_pred             hHH-HHHHHHHHHHHH
Q psy6437         200 SKE-TGVTVLLICICI  214 (254)
Q Consensus       200 SKE-~aI~lp~~~~l~  214 (254)
                      +|= .++.+|+++++.
T Consensus       179 TKG~ial~lP~l~il~  194 (552)
T PRK13279        179 TKGFLALAVPVISVLP  194 (552)
T ss_pred             hcchHHHHHHHHHHHH
Confidence            997 456677655443

>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]

Probab=98.07  E-value=0.00016  Score=71.07  Aligned_cols=126  Identities=21%  Similarity=0.236  Sum_probs=102.0

Q ss_pred             CccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhH
Q psy6437          38 GSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADL  117 (254)
Q Consensus        38 ~~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~l  117 (254)
                      ...-|+..-.-++-+.+||.+.+.-++.+.+.+.+.++++|.+.++++++ ..|++++++.+.-|.-.-.-  -..--|.
T Consensus        62 ~~kPPl~~Wl~a~~~~lfG~~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~-~~a~~aali~~~~p~~~~~~--~~~~~D~  138 (535)
T COG1807          62 FEKPPLVYWLQALSYLLFGVNEWSARLPSALAGALTALLVYWLAKRLFGR-LAALLAALILLLTPLFFLIG--RLALLDA  138 (535)
T ss_pred             cCCCcHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHh--HHHhhhH
Confidence            44667888777889999999999999999999999999999999999998 68999999999988754221  1234577


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHH
Q psy6437         118 LCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAA  197 (254)
Q Consensus       118 La~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lA  197 (254)
                      ..++|..++++++.++.+.+++                                          .  .|.++..+...+|
T Consensus       139 ~l~~f~~la~~~~~~~~~~~~~------------------------------------------~--~~~l~~gl~lGL~  174 (535)
T COG1807         139 ALAFFLTLALALLYLALRARGK------------------------------------------L--KWLLLLGLALGLG  174 (535)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCc------------------------------------------c--cHHHHHHHHHHHH
Confidence            8899999999999988775311                                          1  2456677888999


Q ss_pred             HhhHHHHHHHHHH
Q psy6437         198 MISKETGVTVLLI  210 (254)
Q Consensus       198 lLSKE~aI~lp~~  210 (254)
                      +++|=.++.+++.
T Consensus       175 ~ltKg~~~~~l~~  187 (535)
T COG1807         175 FLTKGPGALLLPL  187 (535)
T ss_pred             HHHhchHHHHHHH
Confidence            9999999888884

>TIGR03766 conserved hypothetical integral membrane protein

Probab=97.70  E-value=0.001  Score=65.52  Aligned_cols=133  Identities=14%  Similarity=0.181  Sum_probs=99.8

Q ss_pred             chhHhHHhHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHH
Q psy6437          41 RPLTVLTFRLNYLACGLKPRS-FHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLC  119 (254)
Q Consensus        41 RPL~~lsf~l~~~l~G~~p~~-fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa  119 (254)
                      -|+..+ .+.-+.++|.+.+. +++.|+++..+...++|.+.+++++++ .|.++++++++-|..+--+.  +-=.|..+
T Consensus       120 ~g~~l~-~~~l~kifg~~~~~~~~llNil~~~~si~liy~i~k~lf~~~-~a~~a~~l~~l~~~~~~y~~--~~Ysd~~~  195 (483)
T TIGR03766       120 LFLLLF-MHFLYKLFGETSWLFFDVVNIVLVDLSALILYKAVKKVFNKK-KAFVALYLFVLLLALSPYIL--IPYTDTWV  195 (483)
T ss_pred             HHHHHH-HHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHHHHHHH--HHHhhhHH
Confidence            344433 34457889984444 499999999999999999999999875 67888888888887554332  45568888


Q ss_pred             HHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHh
Q psy6437         120 TLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMI  199 (254)
Q Consensus       120 ~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlL  199 (254)
                      .+|..+++++|....+++..                                         +.++...+++.++..+|.+
T Consensus       196 l~~~~l~l~~~~~~~~~~~~-----------------------------------------~~~~~~~Il~gillal~~~  234 (483)
T TIGR03766       196 LPFVSLFLFLYTVISKKTDL-----------------------------------------RKKIALSILLGVLLAIAYF  234 (483)
T ss_pred             HHHHHHHHHHHHHHHhcccH-----------------------------------------HHHHHHHHHHHHHHHHHHH
Confidence            88888898888777553211                                         1335566778888999999


Q ss_pred             hHHHHHHHHHHHHHHHHHh
Q psy6437         200 SKETGVTVLLICICIELLH  218 (254)
Q Consensus       200 SKE~aI~lp~~~~l~d~~~  218 (254)
                      .|++++++...++++.++.
T Consensus       235 iKp~~iI~liA~~i~~~l~  253 (483)
T TIGR03766       235 IKPSAIIFVIAIFIVLFLQ  253 (483)
T ss_pred             hcccchHHHHHHHHHHHHH
Confidence            9999999988888777764

Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.

>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria

Probab=97.50  E-value=0.011  Score=51.62  Aligned_cols=149  Identities=17%  Similarity=0.172  Sum_probs=97.7

Q ss_pred             CCCCCccchhHhHHhHHHHHhcC-CCCchHH--HHHHHHHHHHHHHHHHHHHHhccc-------------chHHHHHHHH
Q psy6437          34 PNSHGSYRPLTVLTFRLNYLACG-LKPRSFH--LINNLLHSAITYLVYILSSYVLPN-------------RRARLFASLI   97 (254)
Q Consensus        34 ~~~~~~yRPL~~lsf~l~~~l~G-~~p~~fH--lvNlllH~l~~~Lv~~l~~~l~~~-------------~~~A~laAlL   97 (254)
                      +..|+..-|+-++.-++ ..++. ...-++.  +.+.+.=++...++|+...++.++             ...++++|+.
T Consensus        13 gV~HPPGyPlf~llg~l-f~~lp~~~~ia~~vNl~Sal~sA~tv~~l~~~~~~l~~~~~~~~~~~~~~~~~~a~lv~al~   91 (178)
T PF11028_consen   13 GVPHPPGYPLFTLLGRL-FSLLPDFGNIAWRVNLLSALSSALTVLFLFWSITRLLRKLPEEPSTAQTIAILGAGLVGALA   91 (178)
T ss_pred             CCCCCCCcHHHHHHHHH-HHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHH
Confidence            35689999999888887 67776 3344444  355556666677888888888776             4678889999


Q ss_pred             HHHhhhc-ccchhhHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCC
Q psy6437          98 FAVHPIH-TEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDS  176 (254)
Q Consensus        98 FavHPih-tEaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (254)
                      |+.-|.- .+||.   .--.-+..+|..+.+++.+++.+..++.                                    
T Consensus        92 fafS~sfW~~Av~---aEVYal~~l~~al~~~l~l~w~~~~~~~------------------------------------  132 (178)
T PF11028_consen   92 FAFSDSFWFQAVE---AEVYALSSLFTALLLWLLLKWEREADEP------------------------------------  132 (178)
T ss_pred             HHhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhhcccc------------------------------------
Confidence            9987632 23322   2235677889888999999987653210                                    


Q ss_pred             CCccchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhcccccccc
Q psy6437         177 SHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLHNKVCTHLKN  227 (254)
Q Consensus       177 ~~~~~~~~~~~lla~~~~~lAlLSKE~aI~lp~~~~l~d~~~~~~~~~~~~  227 (254)
                           ++-+|.++...++.+|+--.-+.+...+.+.++-++.++.....||
T Consensus       133 -----~~~r~l~l~afl~GLs~g~H~~~ll~lP~~~~~~~~~~~~~~~~~~  178 (178)
T PF11028_consen  133 -----RSDRWLLLIAFLCGLSLGVHLLNLLALPAIALLYFFKRYKKITWKN  178 (178)
T ss_pred             -----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccC
Confidence                 1123667777778888866666655555555555555555555554

The function is not known.

>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein

Probab=96.91  E-value=0.031  Score=57.16  Aligned_cols=98  Identities=19%  Similarity=0.196  Sum_probs=81.5

Q ss_pred             CccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhH
Q psy6437          38 GSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADL  117 (254)
Q Consensus        38 ~~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~l  117 (254)
                      .+|-|++....++=..+.|....+|.++-.+.-.+.++.+|.+.|++.+ +..|+++|++|..-|-|....-|=..-.+.
T Consensus         2 ~FYpPL~yyl~a~l~~l~g~~~~Ay~l~~~L~~~l~~~~~Y~~~R~~~~-~~~A~l~aiLyl~~py~l~~~y~rgni~e~   80 (616)
T PF10131_consen    2 RFYPPLPYYLGALLSLLFGNPIVAYKLFIFLAFFLGGLGMYFLGRRLGR-RKAAILAAILYLFSPYHLRNIYWRGNIPET   80 (616)
T ss_pred             eeCCcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhHHHHHHHHhcchHHHH
Confidence            3578999988888888888888899998888888888899999999888 889999999999999998887777778888


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q psy6437         118 LCTLFYLSTILIYIKWIKL  136 (254)
Q Consensus       118 La~lF~Llal~~yl~~~~~  136 (254)
                      ++..+.-+-++...+..++
T Consensus        81 lA~~llPlvll~~~~~~~~   99 (616)
T PF10131_consen   81 LAFALLPLVLLFLYRFIKK   99 (616)
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            8877777777666655543

Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.

>COG5617 Predicted integral membrane protein [Function unknown]

Probab=96.65  E-value=0.043  Score=57.41  Aligned_cols=101  Identities=13%  Similarity=0.060  Sum_probs=84.0

Q ss_pred             CCccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhh
Q psy6437          37 HGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRAD  116 (254)
Q Consensus        37 ~~~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~  116 (254)
                      -.+|-|++.+..++--.+-|.....|.+.-.+.- +.++++|.+.|..-+....|+++|+||..-|-|-+..-|=-.-..
T Consensus        67 lrYypPl~Yli~aal~~l~~d~~~t~~v~~~la~-llG~~~~~~~r~~g~t~~ia~I~alL~ltsp~~l~vlf~EGniP~  145 (801)
T COG5617          67 LRYYPPLSYLIGAALNFLLGDVVTTYAVFLMLAF-LLGAGGWLLWRLRGRTGFIALISALLWLTSPENLKVLFIEGNIPR  145 (801)
T ss_pred             ceecCcHHHHHHHHHHHhhcChhHHHHHHHHHHH-HHHHHHHHHHHhhccccchHHHHHHHHHhChhheEEEEecCcccH
Confidence            4679999999998888888944455555554444 999999999999888888999999999999999988776666677


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcC
Q psy6437         117 LLCTLFYLSTILIYIKWIKLGG  138 (254)
Q Consensus       117 lLa~lF~Llal~~yl~~~~~~~  138 (254)
                      +++.-|..+++.++.+..+++.
T Consensus       146 v~~i~f~pl~l~~l~~~~~~Gk  167 (801)
T COG5617         146 VLAIGFGPLALGLLERFLERGK  167 (801)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCc
Confidence            8889999999999999987653

>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64

Probab=96.61  E-value=0.041  Score=53.58  Aligned_cols=127  Identities=17%  Similarity=0.083  Sum_probs=91.4

Q ss_pred             ccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHH
Q psy6437          39 SYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLL  118 (254)
Q Consensus        39 ~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lL  118 (254)
                      .+-|+-.+- ..-|++|+ +|...=++..++=++.+..+|++.|+...+++.|++.++++++.|.-..++. --=+.+.+
T Consensus        41 HfsPil~ll-~Ply~l~P-s~~tLli~Qal~la~~~~pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~-~dFH~~~~  117 (449)
T PF09852_consen   41 HFSPILYLL-APLYRLFP-SPLTLLIVQALLLALGAIPLYRLARRRLLSRRLALLIALAYLLSPGLQGANL-FDFHPVAF  117 (449)
T ss_pred             cchHHHHHH-HHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhh-CCCcHHHH
Confidence            355665543 34688887 8899999999999999999999999998677899999999999998887754 22255666


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHHHH
Q psy6437         119 CTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAM  198 (254)
Q Consensus       119 a~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAl  198 (254)
                      +.-+.+.+++++.+.+                                                 |   ....++.++.+
T Consensus       118 avPll~~~~~~~~~~r-------------------------------------------------~---~~~~~~~ll~l  145 (449)
T PF09852_consen  118 AVPLLLWALYALERRR-------------------------------------------------W---RLFILWALLLL  145 (449)
T ss_pred             HHHHHHHHHHHHHhCc-------------------------------------------------H---HHHHHHHHHHH
Confidence            6555566666442210                                                 1   12456677889


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhc
Q psy6437         199 ISKETGVTVLLICICIELLHNK  220 (254)
Q Consensus       199 LSKE~aI~lp~~~~l~d~~~~~  220 (254)
                      ++||..-...+.+.++-++.+|
T Consensus       146 lvKEd~~l~v~~~gl~~~~~~r  167 (449)
T PF09852_consen  146 LVKEDLGLTVAGIGLYLLLRRR  167 (449)
T ss_pred             HHHhhHHHHHHHHHHHHHHhCc
Confidence            9999887777776666666653

The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.

>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface

Probab=96.13  E-value=0.077  Score=52.05  Aligned_cols=68  Identities=19%  Similarity=0.274  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHHHHHHHHHHHHHHH
Q psy6437          63 HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKW  133 (254)
Q Consensus        63 HlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl~~  133 (254)
                      .++|.++|.+.+..+|.+.+..++++..|..++++|++-|..+   --.+.=.|.+.+++.+.+++.+.+.
T Consensus       116 ~~vs~~~~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~Pasi---F~sa~YsEslf~~lsf~gl~~~~~~  183 (443)
T PF04188_consen  116 ILVSNVAFLLAAVALYRLTRRVFKSRKLALLAALLFIFSPASI---FLSAPYSESLFALLSFAGLYLLERG  183 (443)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHHH---HhhcCccHHHHHHHHHHHHHHHHhc
Confidence            4678899999999999999999888889999999999999864   2234667888888888888877443

Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane

>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

Probab=96.08  E-value=0.071  Score=55.34  Aligned_cols=99  Identities=18%  Similarity=0.197  Sum_probs=76.2

Q ss_pred             CCccchhHhHHhHHHHHhcC------------------CCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy6437          37 HGSYRPLTVLTFRLNYLACG------------------LKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIF   98 (254)
Q Consensus        37 ~~~yRPL~~lsf~l~~~l~G------------------~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLF   98 (254)
                      ++..-|+.-.-+++.-.+.|                  .++.+++.+|.++-.+...++|..+|+...++.++.++++++
T Consensus        69 fDvHPPL~kml~al~~~L~g~~g~f~f~~~g~~~~~~~~~y~~mR~f~A~lgsl~vpl~y~t~r~~~~s~l~~~l~~llv  148 (699)
T COG1928          69 FDVHPPLGKMLIALVGGLEGYDPPFDFQLIGLTEYPFGYNYVGMRFFNALLGSLTVPLVYLIARRIGYSRLVAALAGLLV  148 (699)
T ss_pred             cccCCcHHHHHHHhhhhhhccCCCcccccCCcccccCCCChHHHHHHHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence            44466777776666666654                  456899999999999999999999999999989999999999


Q ss_pred             HHhhhcccchhhHHHHhhHHHHHHHHHHHHHHHHHHHhc
Q psy6437          99 AVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLG  137 (254)
Q Consensus        99 avHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~  137 (254)
                      +..-.++---..|  --|.+..+|..++.+++++.-+.+
T Consensus       149 ~~dn~~~t~sR~I--LLDs~LlfF~~~~~y~~~r~~~~~  185 (699)
T COG1928         149 AFDNSFVTESRFI--LLDSFLLFFIVAAAYCFLRFHRQQ  185 (699)
T ss_pred             HhccchhhhhHHH--HHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9877665432222  135556788899999999886543

>KOG3359|consensus

Probab=95.51  E-value=0.49  Score=49.48  Aligned_cols=143  Identities=16%  Similarity=0.119  Sum_probs=107.2

Q ss_pred             CCCccchhHhHHhHHHHHhcCCCC-----------------chHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy6437          36 SHGSYRPLTVLTFRLNYLACGLKP-----------------RSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIF   98 (254)
Q Consensus        36 ~~~~yRPL~~lsf~l~~~l~G~~p-----------------~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLF   98 (254)
                      -.+..-|+.-.-+++--.+.|.|.                 .+++..|.++-++..-++|...+.+-..+++|.++|+++
T Consensus        79 f~DvHPPlgKmL~al~g~L~GydG~f~f~~~g~~~~~~~~y~~mR~f~a~lgsl~vp~~y~t~~~~~~s~~aa~l~allv  158 (723)
T KOG3359|consen   79 FFDVHPPLGKMLIALVGYLAGYDGSFDFQSIGEYYPNGVPYVGMRLFSALLGSLTVPLAYLTLKELGFSRLAAALAALLV  158 (723)
T ss_pred             eeccCchHHHHHHHHHHHHhCCCCCccccCCCccCCCCCchHhHHHHHHHHHhHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence            345568999999998888877432                 578999999999999999999999988888999999999


Q ss_pred             HHhhhcccchhhHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCC
Q psy6437          99 AVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSH  178 (254)
Q Consensus        99 avHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (254)
                      +.---++.--..|.  -|.+-.+|..+++++++|.--...                                      .|
T Consensus       159 ~~dns~~T~sr~IL--LDs~Llff~~~~~y~~~r~~~~~~--------------------------------------~p  198 (723)
T KOG3359|consen  159 LFDNSLVTLSRFIL--LDSMLLFFMAAAVYCFVRFYTQRK--------------------------------------RP  198 (723)
T ss_pred             hhcccchhhhhHHH--HhHHHHHHHHHHHHHHHHHHHhhc--------------------------------------CC
Confidence            88655543322221  366678899999999998861111                                      01


Q ss_pred             ccchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHH---HHHHHh
Q psy6437         179 TKKDTICAVMRRTALAGAAMISKETGVTVLLICI---CIELLH  218 (254)
Q Consensus       179 ~~~~~~~~~lla~~~~~lAlLSKE~aI~lp~~~~---l~d~~~  218 (254)
                      ...+-|.|+.++.++..||+=+|=.|+...+.+.   +.|+|.
T Consensus       199 fs~~W~~wL~~tGvsLgcaiSvK~vGlft~~~Vgl~~v~~LW~  241 (723)
T KOG3359|consen  199 FSLRWWKWLLLTGVSLGCAISVKYVGLFTIALVGLYTVRELWC  241 (723)
T ss_pred             CcchHHHHHHHHHHHhhheeehhhhhHHHHHHHHHHHHHHHHH
Confidence            1234567888899999999999999987766655   445554

>COG4745 Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=95.10  E-value=0.13  Score=51.53  Aligned_cols=128  Identities=17%  Similarity=0.225  Sum_probs=87.0

Q ss_pred             CCCccchhHh--HHhHHHHHhcC---CCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhh
Q psy6437          36 SHGSYRPLTV--LTFRLNYLACG---LKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSG  110 (254)
Q Consensus        36 ~~~~yRPL~~--lsf~l~~~l~G---~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~  110 (254)
                      +.-+|||.--  +-+..|+.+||   -+-.--+++-.+.-.+..+. -++.|.-++.. -.+..+.+-+..|+-+.=-- 
T Consensus        56 Gaw~YrPi~HGPfL~hvn~avF~~lGasDataRlvvAv~G~llpL~-awL~R~rL~d~-evlal~~LLA~sPvlVYYSR-  132 (556)
T COG4745          56 GAWSYRPIYHGPFLYHVNYAVFGLLGASDATARLVVAVTGVLLPLT-AWLYRTRLGDK-EVLALATLLAFSPVLVYYSR-  132 (556)
T ss_pred             CcceecccccCchhhhhhhhhhhhcccchhhhhhhHHHhhhHHHHH-HHHHHHhccch-HHHHHHHHHhcChhhhhHHH-
Confidence            4567999865  77788888775   35556666555444444433 44444444432 35556667788887653211 


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHH
Q psy6437         111 IVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRR  190 (254)
Q Consensus       111 Iv~R~~lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla  190 (254)
                       --|+|++-++|.++++....|+..+..                                             .+.+-++
T Consensus       133 -FmR~Dl~la~ftl~aVg~~vR~lDt~R---------------------------------------------~~yL~~s  166 (556)
T COG4745         133 -FMRNDLLLAAFTLLAVGFAVRYLDTER---------------------------------------------FRYLYAS  166 (556)
T ss_pred             -HHhhhHHHHHHHHHHHHHHHHHhhccc---------------------------------------------ccchhhh
Confidence             269999999999999999999976541                                             1234456


Q ss_pred             HHHHHHHHhhHHHHHHHHHHHH
Q psy6437         191 TALAGAAMISKETGVTVLLICI  212 (254)
Q Consensus       191 ~~~~~lAlLSKE~aI~lp~~~~  212 (254)
                      ...+.+|+-.||++.+.++...
T Consensus       167 A~~lalAftaKEnall~~~~f~  188 (556)
T COG4745         167 AVSLALAFTAKENALLYVAAFL  188 (556)
T ss_pred             hhhhhhhhhhcccceeHHHHHh
Confidence            6777899999999999998877

>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=94.63  E-value=0.25  Score=48.11  Aligned_cols=89  Identities=21%  Similarity=0.269  Sum_probs=71.5

Q ss_pred             cchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHH
Q psy6437          40 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLC  119 (254)
Q Consensus        40 yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa  119 (254)
                      .-||.---.++.-.+. +.|..+++=+++.|.+.-+++|+..++..++..+++.+|++-|..|.--..  ..++--|+--
T Consensus       136 HPpLgKyIiAl~ml~~-d~Pl~WRiPsiIe~~liliiv~~~~~ki~~~~la~~~aA~~~alDp~l~am--g~VAMLDIhv  212 (438)
T COG4346         136 HPPLGKYIIALGMLIV-DKPLYWRIPSIIEGALILIIVYFVAYKIARSPLAGLIAALLAALDPLLRAM--GGVAMLDIHV  212 (438)
T ss_pred             CCcHHHHHHHHHHHHh-cCCceeeccHHHhhhHHHHHHHHHHHHHhcCchHHHHHHHHHhhCcHHHHh--cchhHHHHHH
Confidence            3577777777766665 899999999999999999999999999999877888899999999975422  3455668888


Q ss_pred             HHHHHHHHHHHH
Q psy6437         120 TLFYLSTILIYI  131 (254)
Q Consensus       120 ~lF~Llal~~yl  131 (254)
                      ++|..+.+++..
T Consensus       213 aFFtaL~~~fl~  224 (438)
T COG4346         213 AFFTALFMYFLA  224 (438)
T ss_pred             HHHHHHHHHHHh
Confidence            999887776653

>PF14264 Glucos_trans_II: Glucosyl transferase GtrII

Probab=94.41  E-value=2.6  Score=38.66  Aligned_cols=127  Identities=20%  Similarity=0.229  Sum_probs=71.0

Q ss_pred             CCccchhHhHHhHHHHHhcCCC----CchHHHHHHHHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHHHhhhcccchhhH
Q psy6437          37 HGSYRPLTVLTFRLNYLACGLK----PRSFHLINNLLHSAITYLVYILSSYVLP-NRRARLFASLIFAVHPIHTEAVSGI  111 (254)
Q Consensus        37 ~~~yRPL~~lsf~l~~~l~G~~----p~~fHlvNlllH~l~~~Lv~~l~~~l~~-~~~~A~laAlLFavHPihtEaV~~I  111 (254)
                      ..+.||+..+...+-   +|..    |+.-.+..+++=++.+.   .+.+.+.. +...+.+.++++...|...|.-.+.
T Consensus        26 ~~~GR~~~~~~~~~l---~~~~~~~~~pl~~iLs~~~la~s~~---~~~~~~~~~~~~~~~l~~~~~~~~P~~~~~lsy~   99 (319)
T PF14264_consen   26 ISSGRPLLDLLMKLL---FGTGNYDLPPLPQILSILFLALSAV---LLVRLFDIKSSFISVLFSLLFISSPFFLENLSYR   99 (319)
T ss_pred             hhcCchHHHHHHHHH---hccCCCchhHHHHHHHHHHHHHHHH---HHHHHhCccchHHHHHHHHHHHHhHHHHHHHHHH
Confidence            356999999887665   3322    33333333333333333   33333332 3466888999999999999987754


Q ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHH
Q psy6437         112 VGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRT  191 (254)
Q Consensus       112 v~R~~lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~  191 (254)
                      -+-.+...+++ +..+-.+. ..+                                              +.+ +.+.+.
T Consensus       100 ~~s~~~~ls~~-l~~la~~~-~~k----------------------------------------------~~~-~~~~~~  130 (319)
T PF14264_consen  100 FDSLPMALSLL-LAVLAFYF-LKK----------------------------------------------SKI-GFLISI  130 (319)
T ss_pred             HccHHHHHHHH-HHHHHHHH-Hhh----------------------------------------------hhH-HHHHHH
Confidence            43322222222 22222222 111                                              112 556677


Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHHh
Q psy6437         192 ALAGAAMISKETGVTVLLICICIELLH  218 (254)
Q Consensus       192 ~~~~lAlLSKE~aI~lp~~~~l~d~~~  218 (254)
                      ++.++++-.-+..+.+-..+.+.+.+.
T Consensus       131 ~ll~~sl~~YQa~~~v~i~l~~~~~l~  157 (319)
T PF14264_consen  131 LLLVLSLGIYQASINVFISLVLIILLL  157 (319)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777888888888877766666555543

>COG5305 Predicted membrane protein [Function unknown]

Probab=93.88  E-value=1.3  Score=45.15  Aligned_cols=101  Identities=20%  Similarity=0.180  Sum_probs=86.4

Q ss_pred             CCCccchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHh
Q psy6437          36 SHGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRA  115 (254)
Q Consensus        36 ~~~~yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~  115 (254)
                      ++...-|+-.+.-..-+++||..-..-+-.+.++=+++..++|.+.|.+++.+ .+++++.++|+.|.|+-.  -...|+
T Consensus        93 ~~~~~~PLYfll~h~W~~lF~~s~~~~Rsls~L~~~~ai~~~y~l~r~l~~~~-~a~la~~~~AisP~~i~~--~qe~R~  169 (552)
T COG5305          93 ELLVHPPLYFLLAHFWMALFGNSLLASRSLSALLSALAIPLVYWLGRELFGST-TALLAAALMAISPFHIFY--SQEARS  169 (552)
T ss_pred             ccCCCCCeeehHHHHHHHHhchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHccChHHHHH--HHHHHH
Confidence            34456677777778888999988888899999999999999999999999886 566999999999999865  347899


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCC
Q psy6437         116 DLLCTLFYLSTILIYIKWIKLGGR  139 (254)
Q Consensus       116 ~lLa~lF~Llal~~yl~~~~~~~~  139 (254)
                      ..++..+.+++..+-+++.+.+..
T Consensus       170 y~L~~~~~lis~~~Ll~ai~~~~~  193 (552)
T COG5305         170 YALAVATTLISATLLLRAIRLPTS  193 (552)
T ss_pred             HHHHHHHHHHHHHHHHHHccCccc
Confidence            999999999999999999876643

>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes

Probab=92.60  E-value=2.4  Score=36.33  Aligned_cols=83  Identities=25%  Similarity=0.245  Sum_probs=47.0

Q ss_pred             cchhHhHHhHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH----HHHhccc---chHHHHHHHHHHHhhhcccchhhHH
Q psy6437          40 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYIL----SSYVLPN---RRARLFASLIFAVHPIHTEAVSGIV  112 (254)
Q Consensus        40 yRPL~~lsf~l~~~l~G~~p~~fHlvNlllH~l~~~Lv~~l----~~~l~~~---~~~A~laAlLFavHPihtEaV~~Iv  112 (254)
                      |-|+..+-+..-..+ +     +...-.++..++...+...    .|+..++   ........++.+.-|+..+..   .
T Consensus         3 YpP~~~~l~~p~~~l-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~   73 (241)
T PF09594_consen    3 YPPLFALLFAPLALL-P-----FPVAFLLWALLSLAALALAVRLLLRRLGRRKPPGRALLLALLLLAFPPVLSALG---L   73 (241)
T ss_pred             CcHHHHHHHHHHHHc-C-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHHHHHHH---h
Confidence            556666555544322 2     3344444444444433333    3333322   123344556778888843333   4


Q ss_pred             HHhhHHHHHHHHHHHHHHH
Q psy6437         113 GRADLLCTLFYLSTILIYI  131 (254)
Q Consensus       113 ~R~~lLa~lF~Llal~~yl  131 (254)
                      ++.|++..++.+++++.+.
T Consensus        74 gq~~~l~~~l~~~a~~~~~   92 (241)
T PF09594_consen   74 GQFDLLVAALLLLALLALR   92 (241)
T ss_pred             ccHHHHHHHHHHHHHHHHH
Confidence            8999999999999988874

It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups

>TIGR03459 crt_membr carotene biosynthesis associated membrane protein

Probab=92.35  E-value=5  Score=40.31  Aligned_cols=148  Identities=17%  Similarity=0.145  Sum_probs=96.1

Q ss_pred             cCcCCCCCCCcccccc---ccCCCCCcCCCCCCCccchhHhHHhHHHHHhcCCCCch----HHHHHHHHHHHHHHHHHHH
Q psy6437           8 TNPDVQLKTPVGDLFN---NDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRS----FHLINNLLHSAITYLVYIL   80 (254)
Q Consensus         8 ~Np~I~~~~~l~~if~---~Dfwg~~l~~~~~~~~yRPL~~lsf~l~~~l~G~~p~~----fHlvNlllH~l~~~Lv~~l   80 (254)
                      -||+.......++-+.   +..|.+      ....|-|+...-+..--.+.|.|+..    ++++.++=-.+..+.+-++
T Consensus       114 ~dPY~~gP~~~~~~~~~~v~~~W~~------t~aPYGPl~l~i~~~v~~l~g~~i~~~v~~~Rl~~l~g~~l~~w~~~rL  187 (470)
T TIGR03459       114 FDPYTVGAAANPGPLLDEVSPDWRN------TTTPYGPLHLLVGQAITTVTGDNVTAGTLAFKLLSLPGLAVMVWAVPKL  187 (470)
T ss_pred             CCccccCCccCCchHhhhcCchhcc------CCCCCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4777775433333222   124543      34679999999999999999988754    6666665555555555555


Q ss_pred             HHHhcccchHHHHHHHHHHHhhhcc-cchhhHHHHhhHHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccc
Q psy6437          81 SSYVLPNRRARLFASLIFAVHPIHT-EAVSGIVGRADLLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYC  159 (254)
Q Consensus        81 ~~~l~~~~~~A~laAlLFavHPiht-EaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~  159 (254)
                      .|+.-.++..|   .-+.+.+|+-. |-|.  ..+.|.++..|.+++++.-.|.+                         
T Consensus       188 ar~~g~~~~~A---lWL~~~NPLviihlvg--g~HnealM~gl~l~gl~~~~r~~-------------------------  237 (470)
T TIGR03459       188 ATHLGGNPTVA---LWLGVLNPLVVIHLIG--GMHNEMLMVGLVSAGILLALKRR-------------------------  237 (470)
T ss_pred             HHHcCCCHHHH---HHHHHcCchhhhhhhc--chhHHHHHHHHHHHHHHHHHhcc-------------------------
Confidence            55554333222   23356788755 5555  35788899999999988775421                         


Q ss_pred             cccccccccccccCCCCCCccchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh
Q psy6437         160 HQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGAAMISKETGVTVLLICICIELLH  218 (254)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~lAlLSKE~aI~lp~~~~l~d~~~  218 (254)
                                              +   ..+.++..+|...|-++++..+.+..+-.-.
T Consensus       238 ------------------------~---~~g~vli~~a~~VK~~a~l~Lpf~~~~~~~~  269 (470)
T TIGR03459       238 ------------------------P---VAGIALIAVAVALKATAGIALPFVVWIWVAH  269 (470)
T ss_pred             ------------------------c---HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence                                    1   2367788899999999999887766554433

This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).

>KOG2647|consensus

Probab=91.73  E-value=0.57  Score=46.37  Aligned_cols=70  Identities=23%  Similarity=0.333  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHHHHHHHHHHHHHHHH
Q psy6437          62 FHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWI  134 (254)
Q Consensus        62 fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl~~~  134 (254)
                      .-++|+.+|++++.++|.+.+..++.+..++-++++|...|...   -.-++-.|.|-++|.+.+++...+.+
T Consensus       128 ~~~vn~~~f~la~~~Lyql~~~~~~~~k~s~~a~liFcfnPAsI---F~ts~YSEsLfa~~s~~Gi~~~~~~~  197 (444)
T KOG2647|consen  128 AVLVNIFFFMLAAVALYQLTRIILHDPKISFYAALLFCFNPASI---FLTAGYSESLFALFSFLGILFLEKGR  197 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcChhHHhhhhheeEecchHh---hhhHHhhHHHHHHHHHHHHHHHhcCC
Confidence            34589999999999999999999999889999999999999765   33357889999999999998876553

>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells

Probab=91.59  E-value=0.58  Score=45.08  Aligned_cols=68  Identities=22%  Similarity=0.256  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhhHHHHHHHHHHHHHHHHHHHhc
Q psy6437          69 LHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRADLLCTLFYLSTILIYIKWIKLG  137 (254)
Q Consensus        69 lH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~lLa~lF~Llal~~yl~~~~~~  137 (254)
                      +-.+.+..+|.+.|++.+ +..++++|++.++.|.+.+=-.-=--..|.+..+|.++++++++++.+++
T Consensus       104 l~~L~vi~~y~~~~~~~~-~~~Gl~aA~l~a~~p~~l~RT~~G~~D~~~~~~~f~~l~~~~~~~a~~~~  171 (483)
T PF02516_consen  104 LGALTVIPVYLLGRRLGG-RKAGLLAAFLLAISPGYLSRTMAGFYDHHMLELFFPLLIIYFFLLALKSA  171 (483)
T ss_dssp             HGGGGHHHHHHHHHHTT--HHHHHHHHHHHTTSHHHHHTSSTT--SGGGGTTHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHhCC-CchHHHHHHHHHHhHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHhcc
Confidence            444556678888866544 56899999999999987643221122678888999999999999888765

A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.

>COG5542 Predicted integral membrane protein [Function unknown]

Probab=89.17  E-value=0.89  Score=44.87  Aligned_cols=128  Identities=18%  Similarity=0.255  Sum_probs=86.8

Q ss_pred             ccchhHhHHhHHHHHh-cCC-CCchHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHHhh
Q psy6437          39 SYRPLTVLTFRLNYLA-CGL-KPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGRAD  116 (254)
Q Consensus        39 ~yRPL~~lsf~l~~~l-~G~-~p~~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R~~  116 (254)
                      .|-|+....-++.-.+ .++ .-..-.+.|..-|...+..+|.+.+...+....|-.+..++-.-|.-.-.+ -+-|+.|
T Consensus        94 ~~~p~~~y~i~ii~~L~~~~~~~l~~~l~s~~~~~~~ay~lY~~tk~~y~~~~~a~fa~i~~~~~P~~i~~s-~iw~~te  172 (420)
T COG5542          94 DYFPLYLYWIRIINKLLSSLYFILAIKLFSNIADFVAAYFLYKITKLRYGLGSMARFATILVILSPSVIYNS-AIWGQTE  172 (420)
T ss_pred             ccCchHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhhheEEEEEeccHHHhhh-hHHhccc
Confidence            4556655555554444 341 123345678888999999999999998887556666666776677654322 2346889


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCccchhhhHHHhhhccccccccccccccccccccCCCCCCccchhHHHHHHHHHHHHH
Q psy6437         117 LLCTLFYLSTILIYIKWIKLGGREQYKYNIKISIMNKYNNIYCHQATTSTYNLCCHEKDSSHTKKDTICAVMRRTALAGA  196 (254)
Q Consensus       117 lLa~lF~Llal~~yl~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lla~~~~~l  196 (254)
                      .+-+++..++++.+..-   +                                             +    .-+.+++.+
T Consensus       173 Slf~ll~~l~iyf~~~k---~---------------------------------------------~----~~a~~~faL  200 (420)
T COG5542         173 SLFTLLSILAIYFFSIK---K---------------------------------------------Q----IPALFFFAL  200 (420)
T ss_pred             hHHHHHHHHHHHHHHcc---c---------------------------------------------h----hHHHHHHHH
Confidence            99999999999988321   1                                             1    226789999


Q ss_pred             HHhhHHHHHHHHHHHHHHHHHhhc
Q psy6437         197 AMISKETGVTVLLICICIELLHNK  220 (254)
Q Consensus       197 AlLSKE~aI~lp~~~~l~d~~~~~  220 (254)
                      |.+.|.||+.+-+.+ +++++-+|
T Consensus       201 a~l~Rsngi~~~p~f-l~~~ik~~  223 (420)
T COG5542         201 ATLFRSNGIFLSPLF-LIPLIKNR  223 (420)
T ss_pred             HHHhccchhHHHHHH-HHHHHhhh
Confidence            999999999876544 45555444

>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]

Probab=87.06  E-value=8.8  Score=40.42  Aligned_cols=97  Identities=21%  Similarity=0.272  Sum_probs=65.6

Q ss_pred             cchhHhHHhHHHHHhcC-CCCc----hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHHHH
Q psy6437          40 YRPLTVLTFRLNYLACG-LKPR----SFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIVGR  114 (254)
Q Consensus        40 yRPL~~lsf~l~~~l~G-~~p~----~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv~R  114 (254)
                      |-|+-...-..-+..+| ..|.    .+-..=.++-.+..+.+|++.|++.+.+ .++++|++.++-|-+..--.-=..|
T Consensus        87 ~~pl~~~l~~~~~~~~~~~~~~~~~~~~~~~PailG~L~vI~vYl~~r~i~~~~-~g~~aa~ll~~~p~~~~rt~~G~~d  165 (773)
T COG1287          87 FPPLFLYLTAALGLILGSIFPVSLETAALLFPAILGVLTVIPVYLLGRRILGDK-TGLLAALLLALAPGYLSRTVAGFYD  165 (773)
T ss_pred             CCchHHHHHHHHHHHHHccCchHHHHHHHHhhHHHhhHHHHHHHHHHHHHhcch-hhHHHHHHHHHhhHHHHHhhcCccC
Confidence            56665544444444433 3441    1222334455677778899999998875 7888888888888876554333578


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhc
Q psy6437         115 ADLLCTLFYLSTILIYIKWIKLG  137 (254)
Q Consensus       115 ~~lLa~lF~Llal~~yl~~~~~~  137 (254)
                      .|..-.+|.+++++.+..+.+..
T Consensus       166 ~~~~~~~~~~~~l~~~~~aL~~~  188 (773)
T COG1287         166 TDMFELLLPLFALFFFLLALKAA  188 (773)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHh
Confidence            88888888888888888887754

>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function

Probab=85.06  E-value=34  Score=32.18  Aligned_cols=85  Identities=21%  Similarity=0.276  Sum_probs=48.6

Q ss_pred             cchhHhHHhHHHHH---hcCCCCc----hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhcccchhhHH
Q psy6437          40 YRPLTVLTFRLNYL---ACGLKPR----SFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSGIV  112 (254)
Q Consensus        40 yRPL~~lsf~l~~~---l~G~~p~----~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtEaV~~Iv  112 (254)
                      |-|+..+--++-..   ++|.++.    .-++.|+++.++...+.....+   +.++    .+++.++-|....-.+.++
T Consensus        95 y~p~~Ylp~alGi~ig~ll~l~~~~~~~l~Rl~nll~~~~l~~~Ai~~~p---~~k~----l~~~i~l~Pm~~~~~aS~s  167 (389)
T PF09913_consen   95 YPPLYYLPQALGIWIGRLLGLSVLVMYYLGRLFNLLLYALLVYLAIKLAP---RGKW----LLALIALLPMTLFQAASVS  167 (389)
T ss_pred             CCcHhhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc---hhHH----HHHHHHHHHHHHHHHHhcC
Confidence            78887776666333   4566653    4566788777665554443332   2222    2556667788776666565


Q ss_pred             HHhhHHHHHHHHHHHHHHH
Q psy6437         113 GRADLLCTLFYLSTILIYI  131 (254)
Q Consensus       113 ~R~~lLa~lF~Llal~~yl  131 (254)
                      .=.-..+..+.+.++++..
T Consensus       168 ~D~~~~~~~~l~~a~~l~~  186 (389)
T PF09913_consen  168 YDGLIIALAFLFIALLLRL  186 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            5444445555555555444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	254
3rce_A	724	Oligosaccharide transferase to N-glycosylate PROT;	95.57

>3rce_A Oligosaccharide transferase to N-glycosylate PROT; oligosaccharyltransferase, membrane protein, helical bundle, glycosylation, acceptor peptide, plasma membrane; HET: PPN; 3.40A {Campylobacter lari}

Probab=95.57  E-value=0.08  Score=53.83  Aligned_cols=94  Identities=15%  Similarity=0.160  Sum_probs=65.4

Q ss_pred             hhHhHHhHHHHHhcCCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhccc-chhhHHHHhhHHH
Q psy6437          42 PLTVLTFRLNYLACGLKPR-SFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTE-AVSGIVGRADLLC  119 (254)
Q Consensus        42 PL~~lsf~l~~~l~G~~p~-~fHlvNlllH~l~~~Lv~~l~~~l~~~~~~A~laAlLFavHPihtE-aV~~Iv~R~~lLa  119 (254)
                      |++.++ +.-+.++|.+.. ..-..-.++-.+.+..+|.+.+++.+. .+++++|++.++-|.+.. +++. .-+.|.++
T Consensus        83 ~~~~l~-a~l~~i~g~sl~~v~~~lp~ifg~L~vi~~yll~~el~~~-~aGl~AAll~ai~P~~i~RS~aG-~~D~e~l~  159 (724)
T 3rce_A           83 SLSTLT-YWLYSILPFSFESIILYMSTFFASLIVVPIILIAREYKLT-TYGFIAALLGSIANSYYNRTMSG-YYDTDMLV  159 (724)
T ss_dssp             HHHHHH-HHHHHSCSSCHHHHHHHHHHHHGGGGHHHHHHHHHHTTCH-HHHHHHHHHHTTSHHHHHTSSTT-CCSGGGGT
T ss_pred             hHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-hHHHHHHHHHHHHHHHHHHhccc-cccchhHH
Confidence            444444 444567776632 222333444556677888899988764 589999999999998753 3321 35678899


Q ss_pred             HHHHHHHHHHHHHHHHhcC
Q psy6437         120 TLFYLSTILIYIKWIKLGG  138 (254)
Q Consensus       120 ~lF~Llal~~yl~~~~~~~  138 (254)
                      .+|.++++++++++.++++
T Consensus       160 i~~~ll~~~~~i~alk~~~  178 (724)
T 3rce_A          160 LVLPMLILLTFIRLTINKD  178 (724)
T ss_dssp             THHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHcCC
Confidence            9999999999999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00