Psyllid ID: psy6503

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60
Protein Sequence
MVIYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEGNLMETWA
Secondary Structure (PSIPRED)
ccccccEEEEEEEccccEEEEEEEEEcccEEEEEEEcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEccEEEEEEEccEEEEEEEEEcccEEEEEEEEccccccccccHHHccccccHHHcc
Coil and Loop (DISEMBL)
MVIYLGHFTQVVWKsssklgvgiarkngHILVVanydppgnyqgqyannnlegnLMETWA
Flexible Loop (DISEMBL)
MVIYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEGNLMETWA
Low Complexity Region (SEG)
MVIYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEGNLMETWA
Disordered region (IsUnstruct)
*VIYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQY**************
Disordered Region (DISOPRED)
MVIYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEG*******
Disordered Region (DISEMBL)
MVIYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEGNLMETWA
Disordered Region (DISPRO)
MVIYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEGNLMETWA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVIYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEGNLMETWA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	60	2.2.26 [Sep-21-2011]
P47032	299	Protein PRY1 OS=Saccharom	yes	N/A	0.733	0.147	0.543	6e-08
P11670	177	Basic form of pathogenesi	N/A	N/A	0.9	0.305	0.436	3e-07
Q08697	175	Pathogenesis-related prot	N/A	N/A	0.8	0.274	0.462	2e-06
P08299	168	Pathogenesis-related prot	N/A	N/A	0.683	0.244	0.5	4e-06
Q41359	167	Pathogenesis-related prot	N/A	N/A	0.683	0.245	0.5	7e-06
P47033	881	Cell wall protein PRY3 OS	no	N/A	0.7	0.047	0.477	9e-06
Q04108	159	Pathogenesis-related leaf	N/A	N/A	0.683	0.257	0.523	2e-05
P04284	159	Pathogenesis-related leaf	N/A	N/A	0.65	0.245	0.55	5e-05
Q40374	173	Pathogenesis-related prot	N/A	N/A	0.683	0.236	0.441	6e-05
P07053	168	Pathogenesis-related prot	N/A	N/A	0.683	0.244	0.5	6e-05

>sp|P47032|PRY1_YEAST Protein PRY1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRY1 PE=1 SV=1

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 2/46 (4%)

Query: 6   GHFTQVVWKSSSKLGVGIARKNGH--ILVVANYDPPGNYQGQYANN 49
           GHFTQVVWKS++++G GI    G     V+ +YDP GNY+G+YA+N
Sbjct: 249 GHFTQVVWKSTTQVGCGIKTCGGAWGDYVICSYDPAGNYEGEYADN 294

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P11670|PRB1_TOBAC Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 5   LGHFTQVVWKSSSKLGVGIARKN-GHILVVANYDPPGNYQGQYANNNLEGNLMET 58
            GH+TQVVW++S +LG    R N G   +  NYDPPGN+ GQ    +LE    ++
Sbjct: 115 CGHYTQVVWRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPFGDLEEQPFDS 169

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|Q08697|PR1A_SOLLC Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 6/54 (11%)

Query: 5   LGHFTQVVWKSSSKLGVGIARKN-GHILVVANYDPPGNYQGQYANNNLEGNLME 57
            GH+TQVVW+ S +LG    R N G + +  NYDPPGNY      +N+ G+L E
Sbjct: 114 CGHYTQVVWRKSVRLGCARVRCNSGWVFITCNYDPPGNYI-----DNVYGDLEE 162

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)

Query: 5   LGHFTQVVWKSSSKLGVG-IARKNGHILVVANYDPPGNYQGQ 45
            GH+TQVVW++S ++G   +   NG  +V  NYDPPGNY+G+
Sbjct: 124 CGHYTQVVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGE 165

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)

Query: 5   LGHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQ 45
            GH+TQVVW++S ++G    R  NG   +  NY PPGNY GQ
Sbjct: 123 CGHYTQVVWRNSVRIGCARVRCNNGAWFITCNYSPPGNYAGQ 164

Probably involved in the defense reaction of plants against pathogens.

Sambucus nigra (taxid: 4202)

>sp|P47033|PRY3_YEAST Cell wall protein PRY3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRY3 PE=1 SV=1

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 2/44 (4%)

Query: 6   GHFTQVVWKSSSKLGVGIAR--KNGHILVVANYDPPGNYQGQYA 47
           GHFTQVVWKS++++G G        +  +V +Y+PPGNY G++A
Sbjct: 112 GHFTQVVWKSTAEIGCGYKYCGTTWNNYIVCSYNPPGNYLGEFA 155

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q04108|PR04_SOLLC Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%)

Query: 5   LGHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQ 45
            GH+TQVVW++S +LG G AR  NG   +  NYDP GN+ G+
Sbjct: 115 CGHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWVGE 156

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

>sp|P04284|PR06_SOLLC Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum GN=PR1B1 PE=1 SV=2

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 1/40 (2%)

Query: 7   HFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQ 45
           H+TQVVW++S +LG G AR  NG   +  NYDP GN+ GQ
Sbjct: 117 HYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQ 156

Probably involved in the defense reaction of plants against pathogens. Has antifungal activity.

Solanum lycopersicum (taxid: 4081)

>sp|Q40374|PR1_MEDTR Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 5   LGHFTQVVWKSSSKLGVG--IARKNGHILVVANYDPPGNYQGQ 45
            GH+TQVVW S++K+G    +   +    +  NYDPPGNY G+
Sbjct: 128 CGHYTQVVWGSTTKVGCASVVCSDDKGTFMTCNYDPPGNYYGE 170

Probably involved in the defense reaction of plants against pathogens.

Medicago truncatula (taxid: 3880)

>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)

Query: 5   LGHFTQVVWKSSSKLGVG-IARKNGHILVVANYDPPGNYQGQ 45
            GH+TQVVW++S ++G   +   NG  +V  NYDPPGN  GQ
Sbjct: 124 CGHYTQVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQ 165

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	60
158285401	569	AGAP007584-PA [Anopheles gambiae str. PE	0.733	0.077	0.688	2e-11
157118976	508	hypothetical protein AaeL_AAEL008479 [Ae	0.733	0.086	0.666	4e-11
157141257	483	hypothetical protein AaeL_AAEL015483 [Ae	0.733	0.091	0.666	6e-11
91077960	583	PREDICTED: similar to LOC495415 protein	0.716	0.073	0.659	1e-10
156542102	500	PREDICTED: hypothetical protein LOC10011	0.766	0.092	0.638	2e-10
170028188	312	conserved hypothetical protein [Culex qu	0.733	0.141	0.666	2e-10
170028182	234	cysteine-rich venom protein [Culex quinq	0.75	0.192	0.6	2e-09
170028184	148	cysteine-rich secretory protein-2 [Culex	0.75	0.304	0.622	2e-09
157118968	220	cysteine-rich venom protein, putative [A	0.75	0.204	0.666	2e-09
195387305	146	GJ17497 [Drosophila virilis] gi|19414879	0.733	0.301	0.681	2e-09

>gi|158285401|ref|XP_001237058.2| AGAP007584-PA [Anopheles gambiae str. PEST] gi|157019974|gb|EAU77602.2| AGAP007584-PA [Anopheles gambiae str. PEST]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQYANN 49
           GHFTQVVWK S +LGVG+AR ++G + VVANYDPPGNY G +A N
Sbjct: 317 GHFTQVVWKDSRELGVGVARNRSGQVFVVANYDPPGNYIGSFAKN 361

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118976|ref|XP_001659276.1| hypothetical protein AaeL_AAEL008479 [Aedes aegypti] gi|108875524|gb|EAT39749.1| AAEL008479-PA [Aedes aegypti]

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQYANN 49
           GHFTQVVWK S +LG+G+AR ++G + VVANYDPPGNY G +A N
Sbjct: 271 GHFTQVVWKDSRELGIGVARNRSGQVFVVANYDPPGNYIGSFAKN 315

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157141257|ref|XP_001647701.1| hypothetical protein AaeL_AAEL015483 [Aedes aegypti] gi|108867515|gb|EAT32369.1| AAEL015483-PA [Aedes aegypti]

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQYANN 49
           GHFTQVVWK S +LG+G+AR ++G + VVANYDPPGNY G +A N
Sbjct: 246 GHFTQVVWKDSRELGIGVARNRSGQVFVVANYDPPGNYIGSFAKN 290

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91077960|ref|XP_967490.1| PREDICTED: similar to LOC495415 protein [Tribolium castaneum] gi|270002291|gb|EEZ98738.1| hypothetical protein TcasGA2_TC001293 [Tribolium castaneum]

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 36/44 (81%)

Query: 6   GHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANN 49
           GHFTQVVWK+S+KLGV  A+  G ++VVANYDPPGNY G ++ N
Sbjct: 177 GHFTQVVWKNSAKLGVAFAKSGGRVVVVANYDPPGNYVGSFSKN 220

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156542102|ref|XP_001603148.1| PREDICTED: hypothetical protein LOC100119359 [Nasonia vitripennis]

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/47 (63%), Positives = 39/47 (82%), Gaps = 1/47 (2%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQYANNNL 51
           GHFTQVVW+ S++LGVG+AR +NG + VVANY+PPGN+ G +A N L
Sbjct: 275 GHFTQVVWRDSTELGVGMARNRNGEVYVVANYNPPGNFLGSFAENVL 321

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170028188|ref|XP_001841978.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167871803|gb|EDS35186.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQYANN 49
           GHFTQVVW+ S +LGVG+AR ++G + VVANYDPPGNY G +A N
Sbjct: 75  GHFTQVVWRDSRELGVGVARNRSGQVFVVANYDPPGNYIGSFAKN 119

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170028182|ref|XP_001841975.1| cysteine-rich venom protein [Culex quinquefasciatus] gi|167871800|gb|EDS35183.1| cysteine-rich venom protein [Culex quinquefasciatus]

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 37/45 (82%)

Query: 5   LGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANN 49
           +GHFTQVVWK S +LGVG+A+   ++ +V NYDPPGN+ G+YA+N
Sbjct: 186 VGHFTQVVWKESRELGVGMAKNGNNVYIVCNYDPPGNFMGKYASN 230

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170028184|ref|XP_001841976.1| cysteine-rich secretory protein-2 [Culex quinquefasciatus] gi|167871801|gb|EDS35184.1| cysteine-rich secretory protein-2 [Culex quinquefasciatus]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 35/45 (77%)

Query: 5   LGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANN 49
           +GHFTQVVWK+  +LGVG+A     + VV NYDPPGNY+ QYA+N
Sbjct: 99  VGHFTQVVWKNCKELGVGMATNGDSVFVVCNYDPPGNYKNQYADN 143

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118968|ref|XP_001659272.1| cysteine-rich venom protein, putative [Aedes aegypti] gi|108875520|gb|EAT39745.1| AAEL008473-PA [Aedes aegypti]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 35/45 (77%)

Query: 5   LGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANN 49
           +GHFTQVVWK+S  LGVGIA+   +I VV NYDPPGN+ GQY  N
Sbjct: 172 VGHFTQVVWKNSKHLGVGIAKNGNNIYVVCNYDPPGNFGGQYPAN 216

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195387305|ref|XP_002052336.1| GJ17497 [Drosophila virilis] gi|194148793|gb|EDW64491.1| GJ17497 [Drosophila virilis]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 32/44 (72%)

Query: 6   GHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANN 49
           GHFTQVVWKSS +LGVG AR+   I VV NYDPPGNY   Y  N
Sbjct: 97  GHFTQVVWKSSKRLGVGFARRGNTIYVVCNYDPPGNYNNMYREN 140

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	60
FB|FBgn0031412	146	CG16995 [Drosophila melanogast	0.733	0.301	0.613	5.8e-11
FB|FBgn0031407	170	CG4270 [Drosophila melanogaste	0.733	0.258	0.545	1.8e-09
SGD|S000003615	299	PRY1 "Sterol binding protein i	0.733	0.147	0.543	1.3e-08
TAIR|locus:2134193	172	AT4G33730 "AT4G33730" [Arabido	0.65	0.226	0.6	1.6e-08
TAIR|locus:2117537	190	AT4G25780 "AT4G25780" [Arabido	0.666	0.210	0.536	2.6e-08
TAIR|locus:2134178	163	AT4G33720 "AT4G33720" [Arabido	0.683	0.251	0.5	3.3e-08
FB|FBgn0051482	195	CG31482 [Drosophila melanogast	0.766	0.235	0.510	4.2e-08
TAIR|locus:2055240	161	PRB1 "AT2G14580" [Arabidopsis	0.666	0.248	0.536	6.8e-08
WB|WBGene00007398	207	C07A4.3 [Caenorhabditis elegan	0.65	0.188	0.534	8.2e-08
TAIR|locus:2005537	176	PR-1-LIKE "AT2G19990" [Arabido	0.666	0.227	0.547	1.1e-07

FB|FBgn0031412 CG16995 [Drosophila melanogaster (taxid:7227)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 27/44 (61%), Positives = 32/44 (72%)

Query:     6 GHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANN 49
             GHFTQVVWKSS++LGVG A+    I VV NY+PPGNY   +  N
Sbjct:    97 GHFTQVVWKSSTELGVGFAKSGSTIYVVCNYNPPGNYNNLFREN 140

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

FB|FBgn0031407 CG4270 [Drosophila melanogaster (taxid:7227)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 24/44 (54%), Positives = 32/44 (72%)

Query:     6 GHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANN 49
             GHFTQ++WKSS ++G G+ARK     VV NY+PPGN  G + +N
Sbjct:   122 GHFTQLIWKSSVEMGSGVARKADRTWVVCNYNPPGNVVGLFKDN 165

GO:0005576 "extracellular region" evidence=IEA

SGD|S000003615 PRY1 "Sterol binding protein involved in the export of acetylated sterols" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 135 (52.6 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query:     6 GHFTQVVWKSSSKLGVGIARKNGHI--LVVANYDPPGNYQGQYANN 49
             GHFTQVVWKS++++G GI    G     V+ +YDP GNY+G+YA+N
Sbjct:   249 GHFTQVVWKSTTQVGCGIKTCGGAWGDYVICSYDPAGNYEGEYADN 294

GO:0032934 "sterol binding" evidence=IDA;IMP

GO:0005576 "extracellular region" evidence=IEA;IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0015918 "sterol transport" evidence=IGI;IMP

GO:0000324 "fungal-type vacuole" evidence=IDA

GO:0005635 "nuclear envelope" evidence=IDA

TAIR|locus:2134193 AT4G33730 "AT4G33730" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 24/40 (60%), Positives = 30/40 (75%)

Query:     6 GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQG 44
             GH+TQVVW+ S++LG G A+  NG  +VV NYDP GNY G
Sbjct:   129 GHYTQVVWRGSARLGCGKAKCNNGASIVVCNYDPAGNYIG 168

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:2117537 AT4G25780 "AT4G25780" [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 22/41 (53%), Positives = 29/41 (70%)

Query:     6 GHFTQVVWKSSSKLGVG-IARKNGHILVVANYDPPGNYQGQ 45
             GH+TQ+VWKS+ ++G   +   NG I +  NYDPPGNY GQ
Sbjct:   147 GHYTQIVWKSTRRVGCARVVCDNGGIFMTCNYDPPGNYIGQ 187

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134178 AT4G33720 "AT4G33720" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query:     6 GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQY 46
             GH+TQVVW++S +LG    R  NG   +  NYDPPGN+ G++
Sbjct:   120 GHYTQVVWRNSERLGCAKVRCNNGQTFITCNYDPPGNWVGEW 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

FB|FBgn0051482 CG31482 [Drosophila melanogaster (taxid:7227)]

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 24/47 (51%), Positives = 32/47 (68%)

Query:     6 GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQYANNNL 51
             GHFT +VWK++ K+G+G A+ K G+  VVA Y PP N  GQ+  N L
Sbjct:   112 GHFTALVWKNAKKMGIGQAKDKKGYYWVVARYYPPVNVNGQFEENVL 158

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2055240 PRB1 "AT2G14580" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 22/41 (53%), Positives = 28/41 (68%)

Query:     6 GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQ 45
             GH+TQVVW++S +LG    R  NG  ++  NYDPPGNY  Q
Sbjct:   118 GHYTQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQ 158

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0009723 "response to ethylene stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

WB|WBGene00007398 C07A4.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 123 (48.4 bits), Expect = 8.2e-08, P = 8.2e-08
 Identities = 23/43 (53%), Positives = 31/43 (72%)

Query:     5 LGHFTQVVWKSSSKLGVGIA-RKNG---HILVVANYDPPGNYQ 43
             +GHFTQ++WK+S K+GVG++  K G   H+ V   YDPPGN Q
Sbjct:   142 VGHFTQLLWKNSRKIGVGVSVAKRGTMYHVYVCIKYDPPGNMQ 184

GO:0005576 "extracellular region" evidence=IEA

TAIR|locus:2005537 PR-1-LIKE "AT2G19990" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 23/42 (54%), Positives = 30/42 (71%)

Query:     6 GHFTQVVWKSSSKLGVGIAR-KNG-HILVVANYDPPGNYQGQ 45
             GH+TQ+VW+ S +LG    R KN  +I V+ +YDPPGNY GQ
Sbjct:   132 GHYTQIVWRDSVRLGCASVRCKNDEYIWVICSYDPPGNYIGQ 173

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0042742 "defense response to bacterium" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P47032	PRY1_YEAST	No assigned EC number	0.5434	0.7333	0.1471	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	60
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	3e-17
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	8e-13
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	6e-09
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	1e-07
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	2e-06
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	6e-05
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	0.001

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score = 69.2 bits (170), Expect = 3e-17
 Identities = 25/38 (65%), Positives = 30/38 (78%), Gaps = 1/38 (2%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNY 42
           GHFTQVVWKSS++LGVG+A+ K G + VVA Y P GN 
Sbjct: 95  GHFTQVVWKSSTELGVGVAKSKKGCVYVVARYRPAGNV 132

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score = 57.6 bits (140), Expect = 8e-13
 Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 2/42 (4%)

Query: 6   GHFTQVVWKSSSKLGVGIAR--KNGHILVVANYDPPGNYQGQ 45
           GH+TQVVW++++++G         G + ++ NYDPPGNY GQ
Sbjct: 92  GHYTQVVWRNTTRVGCARVTCDNGGGVFIICNYDPPGNYIGQ 133

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score = 47.7 bits (114), Expect = 6e-09
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 6/43 (13%)

Query: 6   GHFTQVVWKSSSKLGVGIARKNGH----ILVVANYDPPGNYQG 44
           GHFTQ+VWKS+++  VG A K+        +V  YDP GN  G
Sbjct: 89  GHFTQLVWKSTTQ--VGCAYKDCGGAWGWYIVCEYDPAGNVIG 129

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score = 44.3 bits (105), Expect = 1e-07
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 4/37 (10%)

Query: 6   GHFTQVVWKSSSKLGVGIAR----KNGHILVVANYDP 38
           GH+TQVVW  + K+G G+A          +VV NYDP
Sbjct: 108 GHYTQVVWAKTYKVGCGVANCPDGTKKKTVVVCNYDP 144

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score = 41.3 bits (97), Expect = 2e-06
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)

Query: 6   GHFTQVVWKSSSKLGVGIARKNGHI-LVVANYD 37
           GH+TQVVWK+++K+G G+A    +   VV NY 
Sbjct: 90  GHYTQVVWKNTTKIGCGVAFCGSNSYYVVCNYG 122

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score = 37.5 bits (87), Expect = 6e-05
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)

Query: 6   GHFTQVVWKSSSKLGVGIAR----KNGHILVVANYD 37
           GHFTQ+VW  ++K+G  +AR         +VV NY 
Sbjct: 109 GHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS 144

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score = 33.6 bits (77), Expect = 0.001
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 10/40 (25%)

Query: 6   GHFTQVVWKSSSKLGVGIAR---------KNGHILVVANY 36
           GH+TQVVW ++ K+G G            +N  +L V NY
Sbjct: 97  GHYTQVVWANTFKIGCGSYFCETLEVLRWENATLL-VCNY 135

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	60
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	99.78
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	99.72
KOG3017|consensus	225		99.66
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	99.64
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	99.58
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	99.53
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	99.51
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	99.35
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	99.32
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	99.32
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	98.91
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	96.73
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	96.58

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=99.78  E-value=4.8e-19  Score=105.59  Aligned_cols=46  Identities=43%  Similarity=0.927  Sum_probs=41.4

Q ss_pred             cccchHHHHHhhcCceEEEEEEee-C-CCEEEEEEeeCCCCCCCcccc
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARK-N-GHILVVANYDPPGNYQGQYAN   48 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~-~-~~~~vvC~Y~P~GN~~g~~~~   48 (60)
                      +.++|||||||++|++||||++.+ + +..++||+|+|+||+.|+++|
T Consensus        89 ~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vvC~Y~p~gn~~g~~~Y  136 (136)
T cd05381          89 KMCGHYTQVVWRNTTRVGCARVTCDNGGGVFIICNYDPPGNYIGQRPY  136 (136)
T ss_pred             ccchHHHHHHHHhcCEeceEEEEeCCCCcEEEEEEeeCCCCCCCCCCC
Confidence            368999999999999999999994 3 478999999999999999876

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=99.72  E-value=9.8e-18  Score=99.16  Aligned_cols=42  Identities=43%  Similarity=0.783  Sum_probs=37.6

Q ss_pred             cccchHHHHHhhcCceEEEEEEeeCC--CEEEEEEeeCCCCCCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARKNG--HILVVANYDPPGNYQG   44 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~~~--~~~vvC~Y~P~GN~~g   44 (60)
                      +.++|||||||++|++||||++.|++  ..++||+|+|.||+.|
T Consensus        86 ~~~~h~tqmvw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~Gn~~g  129 (129)
T cd05384          86 EATGHFTQLVWKSTTQVGCAYKDCGGAWGWYIVCEYDPAGNVIG  129 (129)
T ss_pred             CcccchhhhhhhccceeeeEEEEeCCCCeEEEEEEEECCCCCCc
Confidence            57899999999999999999999543  6889999999999875

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>KOG3017|consensus

Probab=99.66  E-value=2.8e-17  Score=104.62  Aligned_cols=54  Identities=41%  Similarity=0.693  Sum_probs=45.0

Q ss_pred             CcccchHHHHHhhcCceEEEEEEee-CC-----CEEEEEEeeCCCCCCC-cccccCCCCCc
Q psy6503           2 VIYLGHFTQVVWKSSSKLGVGIARK-NG-----HILVVANYDPPGNYQG-QYANNNLEGNL   55 (60)
Q Consensus         2 ~~~~ghftqmvW~~t~~vGCa~~~~-~~-----~~~vvC~Y~P~GN~~g-~~~~nV~~p~~   55 (60)
                      .+.+||||||||++|++||||+..| ++     .+++||+|+|+||... +.+|+.++|-.
T Consensus       145 ~~~~gHyTQ~vw~~s~~vGCgv~~c~~~~~~~~~~~~vC~Y~p~g~~~~~~~~y~~g~~cs  205 (225)
T KOG3017|consen  145 GEGIGHYTQMVWAKSTKVGCGVVRCGNGSNGYNTVAVVCNYDPPGNNINGEIPYKGGKPCS  205 (225)
T ss_pred             CCcceEEEEEEEeCCceeceeeccCCCCCCCcceEEEEEEeecCCCCcCCCCcCCCCCccC
Confidence            3679999999999999999999993 33     6799999999966554 78998887654

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=99.64  E-value=1e-16  Score=94.54  Aligned_cols=40  Identities=60%  Similarity=1.026  Sum_probs=36.2

Q ss_pred             cccchHHHHHhhcCceEEEEEEee-CCCEEEEEEeeCCCCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARK-NGHILVVANYDPPGNY   42 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~-~~~~~vvC~Y~P~GN~   42 (60)
                      ..+||||||||++|++||||++.+ ++.+++||+|+|+||+
T Consensus        92 ~~~gh~tqmvw~~t~~vGCa~~~~~~~~~~~vC~Y~p~Gn~  132 (132)
T cd05382          92 SKTGHFTQVVWKSSTELGVGVAKSKKGCVYVVARYRPAGNV  132 (132)
T ss_pred             CCCCCeEEeEecCCCceeeEEEEcCCCCEEEEEEEeCCCCC
Confidence            468999999999999999999994 4678999999999985

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=99.58  E-value=2e-15  Score=90.46  Aligned_cols=38  Identities=34%  Similarity=0.604  Sum_probs=33.1

Q ss_pred             CcccchHHHHHhhcCceEEEEEEee-CC--CEEEEEEeeCC
Q psy6503           2 VIYLGHFTQVVWKSSSKLGVGIARK-NG--HILVVANYDPP   39 (60)
Q Consensus         2 ~~~~ghftqmvW~~t~~vGCa~~~~-~~--~~~vvC~Y~P~   39 (60)
                      +..++|||||||++|++||||++.| ++  ++++||+|+|+
T Consensus        98 ~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~vC~Y~P~  138 (138)
T cd05383          98 GAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCPA  138 (138)
T ss_pred             CCchhhHHHHHHHhccccceEEEECCCCCcCEEEEEecCCC
Confidence            3579999999999999999999994 32  68999999984

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=99.53  E-value=8.7e-15  Score=88.22  Aligned_cols=37  Identities=43%  Similarity=0.682  Sum_probs=32.0

Q ss_pred             cccchHHHHHhhcCceEEEEEEee-CC-----CEEEEEEeeCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARK-NG-----HILVVANYDPP   39 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~-~~-----~~~vvC~Y~P~   39 (60)
                      +.+||||||||++|++||||++.| ++     .+++||+|+|.
T Consensus       102 ~~~ghftqmvw~~t~~vGCa~~~c~~~~~~~~~~~vVC~Y~p~  144 (144)
T cd05385         102 RVCGHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIFVCNYAPA  144 (144)
T ss_pred             CcccCHHHHHHhhccccceEEEECCCCCCccccEEEEEeCCCC
Confidence            568999999999999999999984 32     37899999984

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=99.51  E-value=1.6e-14  Score=86.11  Aligned_cols=38  Identities=47%  Similarity=0.945  Sum_probs=32.7

Q ss_pred             CcccchHHHHHhhcCceEEEEEEe-eCCC---EEEEEEeeCC
Q psy6503           2 VIYLGHFTQVVWKSSSKLGVGIAR-KNGH---ILVVANYDPP   39 (60)
Q Consensus         2 ~~~~ghftqmvW~~t~~vGCa~~~-~~~~---~~vvC~Y~P~   39 (60)
                      ++.++|||||||++|++||||++. .++.   +++||+|+|+
T Consensus       103 ~~~~~hftqmvw~~s~~vGCa~~~c~~~~~~~~~~vC~Y~P~  144 (144)
T smart00198      103 NGKIGHYTQVVWAKTYKVGCGVSNCPDGTKKKTVVVCNYDPP  144 (144)
T ss_pred             ccchhHHHHHHHHhcCCcceEEEECCCCCcceEEEEEecCCC
Confidence            357899999999999999999999 3432   7999999984

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=99.35  E-value=7.6e-13  Score=79.20  Aligned_cols=35  Identities=40%  Similarity=0.661  Sum_probs=30.0

Q ss_pred             cccchHHHHHhhcCceEEEEEEee-C-------CCEEEEEEee
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARK-N-------GHILVVANYD   37 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~-~-------~~~~vvC~Y~   37 (60)
                      +.++|||||||++|++||||++.| +       ...++||+|+
T Consensus        94 ~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~~~~~~vC~Y~  136 (136)
T cd05559          94 KMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLLVCNYG  136 (136)
T ss_pred             CcccchHHHHHhccCccceEEEECCCCCCCCcccCEEEEecCC
Confidence            468999999999999999999984 2       1478999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=99.32  E-value=1.2e-12  Score=77.21  Aligned_cols=35  Identities=43%  Similarity=0.815  Sum_probs=30.8

Q ss_pred             cccchHHHHHhhcCceEEEEEEee-C---CCEEEEEEee
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARK-N---GHILVVANYD   37 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~-~---~~~~vvC~Y~   37 (60)
                      ..++|||||||++|++||||++.+ .   ...++||+|+
T Consensus       106 ~~~~hftq~vw~~t~~vGCa~~~~~~~~~~~~~~vC~Y~  144 (144)
T cd05380         106 SGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS  144 (144)
T ss_pred             cchhHHHHHHHHhcCccceEEEEeecCCceEEEEEecCC
Confidence            568999999999999999999983 3   4789999995

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=99.32  E-value=2.4e-12  Score=75.11  Aligned_cols=35  Identities=46%  Similarity=0.776  Sum_probs=31.1

Q ss_pred             cccchHHHHHhhcCceEEEEEEeeC-CCEEEEEEee
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARKN-GHILVVANYD   37 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~~-~~~~vvC~Y~   37 (60)
                      ..++|||||||++|++||||++.+. ++.++||+|.
T Consensus        87 ~~~~h~~qmvw~~s~~vGca~~~~~~~~~~~vC~Y~  122 (122)
T cd00168          87 SGTGHYTQVVWKNTTKIGCGVAFCGSNSYYVVCNYG  122 (122)
T ss_pred             CCccchhhhhcccCCeeeeEEEEcCCCCEEEEEeCc
Confidence            4589999999999999999999844 6889999994

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=98.91  E-value=2.7e-09  Score=58.97  Aligned_cols=34  Identities=35%  Similarity=0.742  Sum_probs=26.8

Q ss_pred             cccchHHHHHhhcCceEEEEEEee-CCC--EEEEEEe
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARK-NGH--ILVVANY   36 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~-~~~--~~vvC~Y   36 (60)
                      ..++||+||+|.++++||||++.+ ++.  +++||.|
T Consensus        88 ~~~~h~~~ll~~~~~~iGca~~~~~~~~~~~~~vc~y  124 (124)
T PF00188_consen   88 NSPGHFTNLLWPNTTRIGCAVANCPNGKNNYYWVCNY  124 (124)
T ss_dssp             STCHHHHHHT-TT--EEEEEEEEETTSSSEEEEEEEE
T ss_pred             CchhhhhhhhcCCCCEEEEEEEEeCCCCeeEEEEEEC
Confidence            457999999999999999999994 444  9999998

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=96.73  E-value=0.003  Score=35.65  Aligned_cols=32  Identities=25%  Similarity=0.434  Sum_probs=26.6

Q ss_pred             cchHHHHHhhcCceEEEEEEe-eCCCEEEEEEe
Q psy6503           5 LGHFTQVVWKSSSKLGVGIAR-KNGHILVVANY   36 (60)
Q Consensus         5 ~ghftqmvW~~t~~vGCa~~~-~~~~~~vvC~Y   36 (60)
                      .+|+.+|++.+.+++|||+.. .++..+.+..|
T Consensus        89 ~~H~~~ll~~~~~~~Gvg~~~~~~~~~y~~~~f  121 (122)
T cd05379          89 PGHRANILNPDYTEVGVGVAYGGDGGYYWVQVF  121 (122)
T ss_pred             HhHHHHHcCCCcceeeEEEEeCCCCCeEEEEec
Confidence            589999999999999999998 55666666654

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=96.58  E-value=0.0049  Score=36.40  Aligned_cols=33  Identities=21%  Similarity=0.377  Sum_probs=25.9

Q ss_pred             ccchHHHHHhhcCceEEEEEEe-eCCCEEEEEEe
Q psy6503           4 YLGHFTQVVWKSSSKLGVGIAR-KNGHILVVANY   36 (60)
Q Consensus         4 ~~ghftqmvW~~t~~vGCa~~~-~~~~~~vvC~Y   36 (60)
                      ..+|+++|+|.+.+++|||++. .+++.|.+=.|
T Consensus        92 S~gH~~nil~~~~~~~Gvg~~~~~~g~~y~~q~F  125 (127)
T TIGR02909        92 SPGHRANILNPNYTEIGVGYVEGGSGGIYWTQMF  125 (127)
T ss_pred             CHhHHHHHcCCCcCeEeEEEEeCCCCCeEEEEEe
Confidence            3589999999999999999998 55555554333

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	60
1cfe_A	135	P14a, Nmr, 20 Structures Length = 135		5e-06
4aiw_A	154	Gapr-1 With Bound Inositol Hexakisphosphate Length		2e-04
1smb_A	154	Crystal Structure Of Golgi-Associated Pr-1 Protein		2e-04
3nt8_A	424	Crystal Structure Of Na-Asp-1 Length = 424		8e-04

>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures Length = 135

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 7   HFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQ 45
           H+TQVVW++S +LG G AR  NG   +  NYDP GN+ GQ
Sbjct: 93  HYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQ 132

>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate Length = 154

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGN 41
           GHFT +VWK++ K+GVG A   +G   VVA Y P GN
Sbjct: 102 GHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGN 138

>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein Length = 154

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGN 41
           GHFT +VWK++ K+GVG A   +G   VVA Y P GN
Sbjct: 102 GHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGN 138

>pdb|3NT8|A Chain A, Crystal Structure Of Na-Asp-1 Length = 424

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 5   LGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQ 45
           +GH+TQ+ W ++ KLG  +   N     V  Y P GNY G 
Sbjct: 356 IGHYTQMAWDTTYKLGCAVVFCNDFTFGVCQYGPGGNYMGH 396

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	60
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	7e-18
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	1e-17
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	3e-15
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	6e-14
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	1e-13
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-13
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-11
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	3e-13
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	1e-12
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	4e-12
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	1e-05
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	7e-05

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score = 70.8 bits (174), Expect = 7e-18
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNY--QGQYANN 49
           GHFT +VWK++ K+GVG A   +G   VVA Y P GN   +G +  N
Sbjct: 102 GHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEEN 148

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score = 69.6 bits (171), Expect = 1e-17
 Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQ 45
            H+TQVVW++S +LG G AR  NG   +  NYDP GN+ GQ
Sbjct: 92  RHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQ 132

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score = 64.4 bits (157), Expect = 3e-15
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 6   GHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQ 45
           GH+TQ+VW+ + KLG  +   +    VV  Y P GN  G+
Sbjct: 133 GHYTQMVWQETVKLGCYVEACSNMCYVVCQYGPAGNMMGK 172

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score = 61.5 bits (149), Expect = 6e-14
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQYANNNLEG 53
           GH+TQVVW  S  +G   A+  +   L V  Y P GN +G  A     G
Sbjct: 105 GHYTQVVWYKSHLIGCASAKCSSSKYLYVCQYCPAGNIRGSIATPYKSG 153

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score = 61.1 bits (148), Expect = 1e-13
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 6   GHFTQVVWKSSSKLGVGIAR---KNGHILVVANYDPPGNYQGQYA 47
           GH+TQ+VW  + + G  ++           V  Y P GN+QG+ A
Sbjct: 114 GHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTA 158

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 61.7 bits (149), Expect = 2e-13
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 6   GHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQY 46
           GH+TQ+ W ++ KLG  +   N     V  Y P GNY G  
Sbjct: 357 GHYTQMAWDTTYKLGCAVVFCNDFTFGVCQYGPGGNYMGHV 397

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 55.9 bits (134), Expect = 2e-11
 Identities = 10/55 (18%), Positives = 18/55 (32%)

Query: 5   LGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEGNLMETW 59
           L  F+ +V+  ++KLG         + V   Y+  G    Q      +       
Sbjct: 146 LFAFSNMVYSETTKLGCAYKVCGTKLAVSCIYNGVGYITNQPMWETGQACQTGAD 200

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score = 59.8 bits (145), Expect = 3e-13
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)

Query: 6   GHFTQVVWKSSSKLGVGIAR----KNGHILVVANYDPPGNYQGQ 45
           GH+TQ+VW ++ ++G G  +    K     +V NY P GN++ +
Sbjct: 160 GHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNE 203

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score = 58.4 bits (141), Expect = 1e-12
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-----KNGHILVVANYDPPGNYQGQY 46
           GH+TQ+VW  ++K+G G              +V NY P GN  G  
Sbjct: 161 GHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLGAP 206

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score = 56.8 bits (137), Expect = 4e-12
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 9/49 (18%)

Query: 6   GHFTQVVWKSSSKLGVGIAR---------KNGHILVVANYDPPGNYQGQ 45
           GH+TQVVW  S K+G  +            +     + NY P GNY   
Sbjct: 121 GHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNYPTW 169

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 39.3 bits (91), Expect = 1e-05
 Identities = 6/44 (13%), Positives = 14/44 (31%), Gaps = 5/44 (11%)

Query: 6   GHFTQVVWKSSSKLGVGIAR----KNGHILVVANYDPPGNYQGQ 45
                 +    + +G G+           L+  N+    N +G+
Sbjct: 155 KELALAISDRVTAVGCGLTTWEDGAKARALLTCNFS-SQNTRGR 197

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 37.0 bits (85), Expect = 7e-05
 Identities = 7/47 (14%), Positives = 14/47 (29%), Gaps = 6/47 (12%)

Query: 6   GHFTQVVWKSSSKLGVGIARKNG------HILVVANYDPPGNYQGQY 46
               QVV+  +++ G     +         +  V  YD        +
Sbjct: 104 NSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKPKDGESF 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	60
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	99.92
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	99.84
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	99.83
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	99.81
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	99.8
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	99.78
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	99.77
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	99.76
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	99.76
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	99.75
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	99.71
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	99.7
4ifa_A	339	Extracellular protein containing A SCP domain; vac	81.98

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=99.92  E-value=2.1e-25  Score=135.99  Aligned_cols=54  Identities=41%  Similarity=0.680  Sum_probs=48.9

Q ss_pred             CcccchHHHHHhhcCceEEEEEEe-eCCCEEEEEEeeCCCCCCCc--ccccCCCCCc
Q psy6503           2 VIYLGHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQ--YANNNLEGNL   55 (60)
Q Consensus         2 ~~~~ghftqmvW~~t~~vGCa~~~-~~~~~~vvC~Y~P~GN~~g~--~~~nV~~p~~   55 (60)
                      ++.+||||||||++|++||||++. .++..++||+|+|+||++|+  |.+||+||+.
T Consensus        98 ~~~~gHfTQ~VW~~t~~vGCg~a~c~~~~~~vVC~Y~P~GN~~g~~~y~~NV~pPkk  154 (154)
T 4aiw_A           98 TSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLPPKK  154 (154)
T ss_dssp             CTTTHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHHHHHSCCCCC
T ss_pred             CCCcCCeeeeehhhhceeeeEEEEcCCCCEEEEEEEeCCCccCCccchHHhCCCCCC
Confidence            467999999999999999999999 45689999999999999876  8999999974

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=99.84  E-value=2.7e-21  Score=115.41  Aligned_cols=46  Identities=48%  Similarity=0.802  Sum_probs=42.2

Q ss_pred             cccchHHHHHhhcCceEEEEEEee-CCCEEEEEEeeCCCCCCCcccc
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARK-NGHILVVANYDPPGNYQGQYAN   48 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~-~~~~~vvC~Y~P~GN~~g~~~~   48 (60)
                      +.+||||||||++|++||||++.+ ++.+++||+|+|+||+.|+++|
T Consensus        89 ~~~gHfTQ~vW~~t~~vGCa~~~c~~~~~~~VC~Y~p~GN~~g~~pY  135 (135)
T 1cfe_A           89 KKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             SCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred             CcccceeeeEEccCcEEeEEEEEeCCCCEEEEEEEeCCCCCCCCCCC
Confidence            468999999999999999999995 4689999999999999999876

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=99.83  E-value=5.7e-21  Score=119.11  Aligned_cols=52  Identities=33%  Similarity=0.524  Sum_probs=48.1

Q ss_pred             cccchHHHHHhhcCceEEEEEEeeCCCEEEEEEeeCCCCCCCcccccCCCCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEGN   54 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~~~~~~vvC~Y~P~GN~~g~~~~nV~~p~   54 (60)
                      +.+||||||||++|++||||++.+...+++||+|+|.||+.|+++|++++|-
T Consensus       130 ~~~ghfTQ~VW~~t~~vGCa~~~c~~~~~~VC~Y~p~GN~~g~~~Y~~G~pc  181 (196)
T 1u53_A          130 RGVGHYTQMVWQETVKLGCYVEACSNMCYVVCQYGPAGNMMGKDIYEKGEPC  181 (196)
T ss_dssp             TTCHHHHHHTCTTCCEEEEEEEECSSCEEEEEEEESCCCCTTSBSSCBSSTT
T ss_pred             ccccchheeeecccCEEeeEEEEeCCCEEEEEEeCCCCCCCCCcCCccCCCC
Confidence            5799999999999999999999965589999999999999999999999873

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=99.81  E-value=1.5e-20  Score=119.14  Aligned_cols=52  Identities=33%  Similarity=0.619  Sum_probs=45.9

Q ss_pred             cccchHHHHHhhcCceEEEEEEe-eC-C---CEEEEEEeeCCCCCCCcccccCCCCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIAR-KN-G---HILVVANYDPPGNYQGQYANNNLEGN   54 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~-~~-~---~~~vvC~Y~P~GN~~g~~~~nV~~p~   54 (60)
                      +.+||||||||++|++||||++. .+ +   ..++||+|+|+||+.|+++|+|+...
T Consensus       158 ~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~vVC~Y~P~GN~~g~~~y~~~~~~  214 (218)
T 2vzn_A          158 MKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLGAPIYEIKKHH  214 (218)
T ss_dssp             HHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEEEEEEESCCCCTTSCSSCBCCCC
T ss_pred             CCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEEEEEECCCCCCCCCcccccCccc
Confidence            35899999999999999999998 43 2   46999999999999999999998753

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=99.80  E-value=9.2e-20  Score=115.67  Aligned_cols=52  Identities=33%  Similarity=0.543  Sum_probs=47.3

Q ss_pred             cccchHHHHHhhcCceEEEEEEe-eCCCEEEEEEeeCCCCCCCc--ccccCCCCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQ--YANNNLEGN   54 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~-~~~~~~vvC~Y~P~GN~~g~--~~~nV~~p~   54 (60)
                      +.+||||||||++|++||||++. .++.+++||+|+|.||+.|+  .+|+.++|-
T Consensus       102 ~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~VC~Y~P~GN~~g~~~~pY~~G~pc  156 (210)
T 2ddb_A          102 SVIGHYTQVVWYKSHLIGCASAKCSSSKYLYVCQYCPAGNIRGSIATPYKSGPPC  156 (210)
T ss_dssp             SCCHHHHHHTCTTCCEEEEEEEEEETTEEEEEEEEESCSSSTTCTTCSSCBSSTT
T ss_pred             CcccchhhhhhhhccEeeEEEEEcCCCCEEEEEEeeCCCCCCCCccCCCCcCcCc
Confidence            56999999999999999999999 45578999999999999999  899999773

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=99.78  E-value=3.4e-19  Score=113.74  Aligned_cols=52  Identities=27%  Similarity=0.492  Sum_probs=46.8

Q ss_pred             cccchHHHHHhhcCceEEEEEEee-CC--CEEEEEEeeCCCCCCCc--ccccCCCCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARK-NG--HILVVANYDPPGNYQGQ--YANNNLEGN   54 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~-~~--~~~vvC~Y~P~GN~~g~--~~~nV~~p~   54 (60)
                      +.+||||||||++|++||||++.+ ++  .+++||+|+|.||+.|+  .+|+.++|-
T Consensus       111 ~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~pY~~G~pc  167 (221)
T 1xta_A          111 SVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPYKLGPPC  167 (221)
T ss_dssp             CCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTCSSCBSSTT
T ss_pred             CchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCCCcccCCcc
Confidence            569999999999999999999994 33  78999999999999999  899998773

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=99.77  E-value=5.8e-19  Score=110.61  Aligned_cols=51  Identities=31%  Similarity=0.516  Sum_probs=44.8

Q ss_pred             cccchHHHHHhhcCceEEEEEEeeC---------CCEEEEEEeeCCCCCCCcccccCCCCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARKN---------GHILVVANYDPPGNYQGQYANNNLEGN   54 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~~---------~~~~vvC~Y~P~GN~~g~~~~nV~~p~   54 (60)
                      +.+||||||||++|++||||++.+.         ...++||+|.|.||+ ++.+|+.++|-
T Consensus       118 ~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~GN~-~~~pY~~G~pc  177 (205)
T 3q2u_A          118 KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-PTWPYKRGATC  177 (205)
T ss_dssp             SCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCCCC-SSCSSCBSSTT
T ss_pred             chhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCCCc-CCCCCCcCccc
Confidence            5699999999999999999999842         257899999999999 88899998764

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=99.76  E-value=2.4e-19  Score=112.93  Aligned_cols=47  Identities=30%  Similarity=0.665  Sum_probs=42.0

Q ss_pred             ccchHHHHHhhcCceEEEEEEe-eCC---CEEEEEEeeCCCCCCCcccccC
Q psy6503           4 YLGHFTQVVWKSSSKLGVGIAR-KNG---HILVVANYDPPGNYQGQYANNN   50 (60)
Q Consensus         4 ~~ghftqmvW~~t~~vGCa~~~-~~~---~~~vvC~Y~P~GN~~g~~~~nV   50 (60)
                      .+||||||||++|++||||++. .++   ..++||+|+|.||+.|+.+|++
T Consensus       158 ~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~P~GN~~g~~~Y~~  208 (209)
T 1qnx_A          158 KTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELYQT  208 (209)
T ss_dssp             HHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCCCCTTSCSSCB
T ss_pred             cccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeCCCCCCCCCCCCee
Confidence            5899999999999999999998 333   4689999999999999999875

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=99.76  E-value=8.4e-19  Score=118.98  Aligned_cols=52  Identities=31%  Similarity=0.576  Sum_probs=47.8

Q ss_pred             cccchHHHHHhhcCceEEEEEEeeCCCEEEEEEeeCCCCCCCcccccCCCCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEGN   54 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~~~~~~vvC~Y~P~GN~~g~~~~nV~~p~   54 (60)
                      +.+||||||||++|++||||++.+.+..++||+|+|+||+.|+++|+.++|-
T Consensus       354 ~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~VC~Y~p~GN~~g~~~Y~~G~pc  405 (424)
T 3nt8_A          354 MQIGHYTQMAWDTTYKLGCAVVFCNDFTFGVCQYGPGGNYMGHVIYTMGQPC  405 (424)
T ss_dssp             CCCHHHHHHHCTTCCEEEEEEEECSSSEEEEEEEESCCCCTTSBSSCBSSTT
T ss_pred             CcccchHHHhhhhcceeeeEEEEeCCCeEEEEEecCCCCcCCCCCCCCCccc
Confidence            4799999999999999999999965568999999999999999999999874

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=99.75  E-value=9.2e-19  Score=111.72  Aligned_cols=51  Identities=14%  Similarity=0.249  Sum_probs=45.1

Q ss_pred             cccchHHHHHhhcCceEEEEEEe-eCC---CEEEEEEeeCCCCCCCcccccCC-CCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIAR-KNG---HILVVANYDPPGNYQGQYANNNL-EGN   54 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~-~~~---~~~vvC~Y~P~GN~~g~~~~nV~-~p~   54 (60)
                      +.+||||||||++|++||||++. .++   .+++||+|+| ||+.|+.+|+.+ +|-
T Consensus       152 ~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~p-GN~~g~~~Y~~G~~pc  207 (233)
T 3u3l_C          152 GDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFSS-QNTRGRPVYKIGNSPG  207 (233)
T ss_dssp             CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEESC-CCCTTSCSSCBCSSTT
T ss_pred             cchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEECCC-CCCCCCceeeCCCCcc
Confidence            57999999999999999999999 333   5799999998 999999999998 653

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=99.71  E-value=1.2e-17  Score=113.29  Aligned_cols=52  Identities=19%  Similarity=0.164  Sum_probs=47.9

Q ss_pred             cccchHHHHHhhcCceEEEEEEeeCCCEEEEEEeeCCCCCCCcccccCCCCC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARKNGHILVVANYDPPGNYQGQYANNNLEGN   54 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~~~~~~vvC~Y~P~GN~~g~~~~nV~~p~   54 (60)
                      ..+||||||||++|++||||++.+...+++||+|+|.||+.|+.+|+.++|-
T Consensus       144 ~~~ghfTqmvw~~t~~vGCa~~~c~~~~~~VC~Y~p~GN~~g~~~Y~~G~~c  195 (424)
T 3nt8_A          144 GGLFAFSNMVYSETTKLGCAYKVCGTKLAVSCIYNGVGYITNQPMWETGQAC  195 (424)
T ss_dssp             TTCHHHHHHHCTTCCEEEEEEEEETTEEEEEEEESSCCCSTTCBSSEESCCB
T ss_pred             cchHHHHHHHHHhcCeeceEEEEeCCcEEEEEEECCCCCcccccccccCCCC
Confidence            4689999999999999999999965588999999999999999999999875

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=99.70  E-value=1.7e-17  Score=106.13  Aligned_cols=49  Identities=14%  Similarity=0.103  Sum_probs=43.6

Q ss_pred             ccchHHHHHhhcCceEEEEEEeeC-----C-CEEEEEEeeCCCCCCCcccccCCCCC
Q psy6503           4 YLGHFTQVVWKSSSKLGVGIARKN-----G-HILVVANYDPPGNYQGQYANNNLEGN   54 (60)
Q Consensus         4 ~~ghftqmvW~~t~~vGCa~~~~~-----~-~~~vvC~Y~P~GN~~g~~~~nV~~p~   54 (60)
                      .+||||||||++|++||||++.+.     + .+++||+|+|.|  .|+.+|+.++|=
T Consensus       102 ~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--~g~~~Y~~G~pC  156 (206)
T 3s6s_A          102 DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--KDGESFEGGKPC  156 (206)
T ss_dssp             CHHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--CTTCCCCCSCCC
T ss_pred             hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--CCCCCcccCCCC
Confidence            579999999999999999999952     3 579999999988  999999999884

>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}

Probab=81.98  E-value=0.79  Score=30.76  Aligned_cols=21  Identities=29%  Similarity=0.439  Sum_probs=19.1

Q ss_pred             cchHHHHHhhcCceEEEEEEe
Q psy6503           5 LGHFTQVVWKSSSKLGVGIAR   25 (60)
Q Consensus         5 ~ghftqmvW~~t~~vGCa~~~   25 (60)
                      .||..+|++.+.+++|+|+..
T Consensus       309 pGHr~NIL~~~~t~iGvGv~~  329 (339)
T 4ifa_A          309 EGHRKNLLNEQFTGLGVGVYD  329 (339)
T ss_dssp             HHHHHHHTCTTCCEEEEEEET
T ss_pred             HhHHHHHhCCCCCEEEEEEEe
Confidence            589999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	60
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	2e-10
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	1e-09
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	8e-09
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	2e-07

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score = 51.1 bits (121), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 4/45 (8%)

Query: 6   GHFTQVVWKSSSKLGVGIAR----KNGHILVVANYDPPGNYQGQY 46
           GH+TQ+VW ++ ++G G  +    K     +V NY P GN++ + 
Sbjct: 160 GHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEE 204

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score = 47.9 bits (113), Expect = 1e-09
 Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%)

Query: 7   HFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQY 46
           H+TQVVW++S +LG G AR  NG   +  NYDP GN+ GQ 
Sbjct: 93  HYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQR 133

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score = 46.4 bits (109), Expect = 8e-09
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 7   HFTQVVWKSSSKLGVGIAR---KNGHILVVANYDPPGNYQGQYANNNLEG 53
           H+TQ+VW  S ++G   A           V  Y P GN+ G+ A     G
Sbjct: 115 HYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPYTSG 164

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 2e-07
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)

Query: 6   GHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNY--QGQYANN 49
           GHFT +VWK++ K+GVG A   +G   VVA Y P GN   +G +  N
Sbjct: 99  GHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEEN 145

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	60
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	99.85
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	99.85
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	99.79
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	99.74

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.3e-22  Score=118.63  Aligned_cols=52  Identities=42%  Similarity=0.714  Sum_probs=46.8

Q ss_pred             CcccchHHHHHhhcCceEEEEEEe-eCCCEEEEEEeeCCCCCCCc--ccccCCCC
Q psy6503           2 VIYLGHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQ--YANNNLEG   53 (60)
Q Consensus         2 ~~~~ghftqmvW~~t~~vGCa~~~-~~~~~~vvC~Y~P~GN~~g~--~~~nV~~p   53 (60)
                      ...+||||||||.+|++||||++. .++..++||+|+|.||+.|+  |.+||+||
T Consensus        95 ~~~~ghftqmvw~~t~~vGCg~a~c~~~~~~~VC~Y~p~GN~~~~~~y~~nv~~p  149 (149)
T d1smba_          95 TSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLPP  149 (149)
T ss_dssp             CGGGHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHHHHHSCCC
T ss_pred             ccccchhhheecCCceEeeEEEEEcCCCCEEEEEEeeCCCCcCCcccchhcCCCc
Confidence            356899999999999999999999 45688999999999999876  88999998

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=99.85  E-value=3.9e-22  Score=117.49  Aligned_cols=47  Identities=47%  Similarity=0.787  Sum_probs=42.8

Q ss_pred             CcccchHHHHHhhcCceEEEEEEe-eCCCEEEEEEeeCCCCCCCcccc
Q psy6503           2 VIYLGHFTQVVWKSSSKLGVGIAR-KNGHILVVANYDPPGNYQGQYAN   48 (60)
Q Consensus         2 ~~~~ghftqmvW~~t~~vGCa~~~-~~~~~~vvC~Y~P~GN~~g~~~~   48 (60)
                      .+.+||||||||++|++||||++. .++.+++||+|+|+||+.|+++|
T Consensus        88 ~~~~ghftQmvW~~t~~vGCa~~~c~~~~~~vVC~Y~P~GN~~g~~pY  135 (135)
T d1cfea_          88 GKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             SSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred             CcccchhheeeehhheEeeEEEEEECCCCEEEEEEEeCCCCcCCcCCC
Confidence            357899999999999999999999 45688999999999999999986

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=99.79  E-value=9.7e-20  Score=109.34  Aligned_cols=48  Identities=33%  Similarity=0.626  Sum_probs=41.3

Q ss_pred             cccchHHHHHhhcCceEEEEEEee-CC--CEEEEEEeeCCCCCCCccc--ccC
Q psy6503           3 IYLGHFTQVVWKSSSKLGVGIARK-NG--HILVVANYDPPGNYQGQYA--NNN   50 (60)
Q Consensus         3 ~~~ghftqmvW~~t~~vGCa~~~~-~~--~~~vvC~Y~P~GN~~g~~~--~nV   50 (60)
                      ..++|||||||++|++||||++.+ ++  ..++||+|+|+||+.|++.  |+.
T Consensus       111 ~~~ghftqmvW~~t~~vGCa~~~c~~~~~~~~vVC~Y~P~GN~~g~~~~~Y~~  163 (164)
T d1rc9a1         111 AVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPYTS  163 (164)
T ss_dssp             CCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTCTTCSSCB
T ss_pred             chhhHHHHHhhhcccEEeEEEEEeCCCCceEEEEEEEcCCCccCCCcCCCccC
Confidence            458999999999999999999983 43  6889999999999999864  554

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=99.74  E-value=6.5e-19  Score=108.72  Aligned_cols=47  Identities=30%  Similarity=0.663  Sum_probs=42.2

Q ss_pred             ccchHHHHHhhcCceEEEEEEe-eC-C--CEEEEEEeeCCCCCCCcccccC
Q psy6503           4 YLGHFTQVVWKSSSKLGVGIAR-KN-G--HILVVANYDPPGNYQGQYANNN   50 (60)
Q Consensus         4 ~~ghftqmvW~~t~~vGCa~~~-~~-~--~~~vvC~Y~P~GN~~g~~~~nV   50 (60)
                      .+||||||||++|++||||++. .. +  .+++||+|+|.||+.|+.+|++
T Consensus       158 ~~ghftQmvw~~t~~VGCa~~~c~~~~~~~~~vVC~Y~p~GN~~g~~~Y~~  208 (209)
T d1qnxa_         158 KTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELYQT  208 (209)
T ss_dssp             HHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCCCCTTSCSSCB
T ss_pred             ccchhHHHhhhhhCEEeEEEEEEcCCCCCEEEEEEEECCCCCCCCCCCCcc
Confidence            5899999999999999999998 33 2  6789999999999999999975