Psyllid ID: psy653

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-
Protein Sequence
MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSSRVGFSDSGVIRVVPCFSRLECLATCNPCPDW
Secondary Structure (PSIPRED)
cccccccccccEEEEEEEccHHHHHHHHHccccccEEEEcccccccccccHHHHHHHHHHHHHccccccEEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHcHcccccccccEEEEEccccHHHHHccccccccc
Coil and Loop (DISEMBL)
MGSLFRSEEMALCQLFLQSEAAYACVSELGelglvqfrdrdiplgylhfdrinserlvssrvgfsdsgvirvvpcfsrleclatcnpcpdw
Flexible Loop (DISEMBL)
MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHfdrinserlvssrvgfsdsGVIRVVPCFSrleclatcnpcpdw
Low Complexity Region (SEG)
MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSSRVGFSDSGVIRVVPCFSRLECLATCNPCPDW
Disordered region (IsUnstruct)
*********MALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSSRVGFSDSGVIRVVPCFSRLECLATCNP****
Disordered Region (DISOPRED)
**SLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSSRVGFSDSGVIRVVPCFSRLECLATCNPC***
Disordered Region (DISEMBL)
********EMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSSRVGFSDSGVIRVVPCFSRLECLATCNPCPDW
Disordered Region (DISPRO)
*****RSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSSRVGFSDSGVIRVVPCFSRLECLATCNPCPDW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSSRVGFSDSGVIRVVPCFSRLECLATCNPCPDW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	91	2.2.26 [Sep-21-2011]
Q29466	838	V-type proton ATPase 116	yes	N/A	0.428	0.046	0.871	3e-13
Q9Z1G4	839	V-type proton ATPase 116	yes	N/A	0.428	0.046	0.871	3e-13
Q9I8D0	838	V-type proton ATPase 116	yes	N/A	0.428	0.046	0.871	4e-13
Q93050	837	V-type proton ATPase 116	yes	N/A	0.428	0.046	0.871	4e-13
Q5R422	837	V-type proton ATPase 116	yes	N/A	0.428	0.046	0.871	4e-13
A1A5G6	837	V-type proton ATPase 116	yes	N/A	0.428	0.046	0.871	4e-13
Q8AVM5	831	V-type proton ATPase 116	N/A	N/A	0.428	0.046	0.871	5e-13
P25286	838	V-type proton ATPase 116	yes	N/A	0.428	0.046	0.846	3e-12
Q9HBG4	840	V-type proton ATPase 116	no	N/A	0.659	0.071	0.566	9e-12
Q920R6	833	V-type proton ATPase 116	no	N/A	0.659	0.072	0.55	1e-11

>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1  MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.
Bos taurus (taxid: 9913)

>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus GN=Atp6v0a1 PE=1 SV=3

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1  MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Mus musculus (taxid: 10090)

>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus GN=ATP6V0A1 PE=1 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1  MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Gallus gallus (taxid: 9031)

>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1  MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Homo sapiens (taxid: 9606)

>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1  MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Pongo abelii (taxid: 9601)

>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus tropicalis GN=atp6v0a1 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1  MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Xenopus tropicalis (taxid: 8364)

>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis GN=atp6v0a1 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct: 1  MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Xenopus laevis (taxid: 8355)

>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus GN=Atp6v0a1 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/39 (84%), Positives = 33/39 (84%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MG LFRSEEM L QLFLQSEAAY CVSEL ELG VQFRD
Sbjct: 1  MGELFRSEEMTLAQLFLQSEAAYCCVSELEELGKVQFRD 39

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Rattus norvegicus (taxid: 10116)

>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=2

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/60 (56%), Positives = 41/60 (68%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSS 60
          M S+FRSEEM L QLFLQ EAAY CV+ELGELGLVQF+D ++ +       +N  R   S
Sbjct: 1  MVSVFRSEEMCLSQLFLQVEAAYCCVAELGELGLVQFKDLNMNVNSFQRKFVNEVRRCES 60

Part of the proton channel of the V-ATPase that is involved in normal vectorial acid transport into the urine by the kidney.

Homo sapiens (taxid: 9606)

>sp|Q920R6|VPP4_MOUSE V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus GN=Atp6v0a4 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/60 (55%), Positives = 40/60 (66%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSS 60
          M S+FRSEEM L Q+FLQ EAAY CV+ELGELGLVQF+D +  +       +N  R   S
Sbjct: 1  MASVFRSEEMCLSQVFLQVEAAYCCVAELGELGLVQFKDLNANVNSFQRKFVNEVRRCES 60

Part of the proton channel of the V-ATPase that is involved in normal vectorial acid transport into the urine by the kidney.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
390177594	855	GA14320, isoform D [Drosophila pseudoobs	0.428	0.045	1.0	4e-15
24650963	850	vacuolar H[+] ATPase subunit 100-1, isof	0.428	0.045	1.0	4e-15
24650959	833	vacuolar H[+] ATPase subunit 100-1, isof	0.428	0.046	1.0	4e-15
24650965	836	vacuolar H[+] ATPase subunit 100-1, isof	0.428	0.046	1.0	4e-15
21358171	855	vacuolar H[+] ATPase subunit 100-1, isof	0.428	0.045	1.0	4e-15
390177602	852	GA14320, isoform H [Drosophila pseudoobs	0.428	0.045	1.0	4e-15
390177598	833	GA14320, isoform F [Drosophila pseudoobs	0.428	0.046	1.0	4e-15
390177596	850	GA14320, isoform E [Drosophila pseudoobs	0.428	0.045	1.0	4e-15
390177592	836	GA14320, isoform C [Drosophila pseudoobs	0.428	0.046	1.0	4e-15
195503375	888	GE23836 [Drosophila yakuba] gi|194184726	0.428	0.043	1.0	4e-15

>gi|390177594|ref|XP_003736428.1| GA14320, isoform D [Drosophila pseudoobscura pseudoobscura] gi|388859110|gb|EIM52501.1| GA14320, isoform D [Drosophila pseudoobscura pseudoobscura]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24650963|ref|NP_733273.1| vacuolar H[+] ATPase subunit 100-1, isoform G [Drosophila melanogaster] gi|23172537|gb|AAN14157.1| vacuolar H[+] ATPase subunit 100-1, isoform G [Drosophila melanogaster]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

Source: Drosophila melanogaster

Species: melanogaster group

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

>gi|24650959|ref|NP_733271.1| vacuolar H[+] ATPase subunit 100-1, isoform A [Drosophila melanogaster] gi|24650961|ref|NP_733272.1| vacuolar H[+] ATPase subunit 100-1, isoform F [Drosophila melanogaster] gi|23172535|gb|AAN14155.1| vacuolar H[+] ATPase subunit 100-1, isoform A [Drosophila melanogaster] gi|23172536|gb|AAN14156.1| vacuolar H[+] ATPase subunit 100-1, isoform F [Drosophila melanogaster]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

Source: Drosophila melanogaster

Species: melanogaster group

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

>gi|24650965|ref|NP_733274.1| vacuolar H[+] ATPase subunit 100-1, isoform B [Drosophila melanogaster] gi|24650967|ref|NP_733275.1| vacuolar H[+] ATPase subunit 100-1, isoform D [Drosophila melanogaster] gi|442621618|ref|NP_733276.3| vacuolar H[+] ATPase subunit 100-1, isoform K [Drosophila melanogaster] gi|23172538|gb|AAN14158.1| vacuolar H[+] ATPase subunit 100-1, isoform B [Drosophila melanogaster] gi|23172539|gb|AAN14159.1| vacuolar H[+] ATPase subunit 100-1, isoform D [Drosophila melanogaster] gi|281183445|gb|ADA53591.1| RE06427p [Drosophila melanogaster] gi|440218005|gb|AAN14160.3| vacuolar H[+] ATPase subunit 100-1, isoform K [Drosophila melanogaster]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

Source: Drosophila melanogaster

Species: melanogaster group

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

>gi|21358171|ref|NP_651672.1| vacuolar H[+] ATPase subunit 100-1, isoform E [Drosophila melanogaster] gi|24650956|ref|NP_733270.1| vacuolar H[+] ATPase subunit 100-1, isoform C [Drosophila melanogaster] gi|4972712|gb|AAD34751.1| unknown [Drosophila melanogaster] gi|7301749|gb|AAF56861.1| vacuolar H[+] ATPase subunit 100-1, isoform C [Drosophila melanogaster] gi|23172534|gb|AAN14154.1| vacuolar H[+] ATPase subunit 100-1, isoform E [Drosophila melanogaster] gi|220943692|gb|ACL84389.1| Vha100-1-PC [synthetic construct]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

Source: Drosophila melanogaster

Species: melanogaster group

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

>gi|390177602|ref|XP_001358296.3| GA14320, isoform H [Drosophila pseudoobscura pseudoobscura] gi|388859114|gb|EAL27434.3| GA14320, isoform H [Drosophila pseudoobscura pseudoobscura]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390177598|ref|XP_003736430.1| GA14320, isoform F [Drosophila pseudoobscura pseudoobscura] gi|388859112|gb|EIM52503.1| GA14320, isoform F [Drosophila pseudoobscura pseudoobscura]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390177596|ref|XP_003736429.1| GA14320, isoform E [Drosophila pseudoobscura pseudoobscura] gi|388859111|gb|EIM52502.1| GA14320, isoform E [Drosophila pseudoobscura pseudoobscura]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390177592|ref|XP_003736427.1| GA14320, isoform C [Drosophila pseudoobscura pseudoobscura] gi|388859109|gb|EIM52500.1| GA14320, isoform C [Drosophila pseudoobscura pseudoobscura]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195503375|ref|XP_002098625.1| GE23836 [Drosophila yakuba] gi|194184726|gb|EDW98337.1| GE23836 [Drosophila yakuba]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
          MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct: 1  MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
FB|FBgn0028671	855	Vha100-1 "Vacuolar H[+] ATPase	0.428	0.045	1.0	6.5e-15
UNIPROTKB|K7ELZ6	93	ATP6V0A1 "V-type proton ATPase	0.428	0.419	0.871	1.2e-12
UNIPROTKB|K7EM24	130	ATP6V0A1 "V-type proton ATPase	0.428	0.3	0.871	1.2e-12
UNIPROTKB|K7EPG4	198	ATP6V0A1 "V-type proton ATPase	0.428	0.196	0.871	1.2e-12
UNIPROTKB|K7EQW2	68	ATP6V0A1 "V-type proton ATPase	0.428	0.573	0.871	1.2e-12
ZFIN|ZDB-GENE-050522-215	839	atp6v0a1b "ATPase, H+ transpor	0.428	0.046	0.871	7.9e-12
UNIPROTKB|F1P4E6	77	ATP6V0A4 "Uncharacterized prot	0.659	0.779	0.566	1.3e-11
UNIPROTKB|B7Z641	788	ATP6V0A1 "cDNA FLJ54439, highl	0.428	0.049	0.871	2e-11
UNIPROTKB|B7Z2A9	794	ATP6V0A1 "V-type proton ATPase	0.428	0.049	0.871	2e-11
UNIPROTKB|F1PVS8	801	ATP6V0A1 "Uncharacterized prot	0.428	0.048	0.871	2e-11

FB|FBgn0028671 Vha100-1 "Vacuolar H[+] ATPase 100kD subunit 1" [Drosophila melanogaster (taxid:7227)]

 Score = 195 (73.7 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
             MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD
Sbjct:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=ISS

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=ISS

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0045202 "synapse" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0005769 "early endosome" evidence=IDA

GO:0051452 "intracellular pH reduction" evidence=IMP

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0048388 "endosomal lumen acidification" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0009881 "photoreceptor activity" evidence=IMP

UNIPROTKB|K7ELZ6 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
             MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct:     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|K7EM24 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
             MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct:     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|K7EPG4 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
             MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct:     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|K7EQW2 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
             MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct:     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

ZFIN|ZDB-GENE-050522-215 atp6v0a1b "ATPase, H+ transporting, lysosomal V0 subunit a isoform 1b" [Danio rerio (taxid:7955)]

 Score = 172 (65.6 bits), Expect = 7.9e-12, P = 7.9e-12
 Identities = 34/39 (87%), Positives = 35/39 (89%)

Query:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
             MG LFRSEEM L QLFLQSEAAY CVSELGELG+VQFRD
Sbjct:     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGMVQFRD 39

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0042221 "response to chemical stimulus" evidence=IDA

UNIPROTKB|F1P4E6 ATP6V0A4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 34/60 (56%), Positives = 41/60 (68%)

Query:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLVSS 60
             M S+FRSEEM+L QLFLQ EAAY CV+ELG+LGLVQFRD +  +       +N  R   S
Sbjct:     1 MASVFRSEEMSLMQLFLQVEAAYCCVAELGDLGLVQFRDLNANVSSFQRKFVNEVRRCES 60

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0006885 "regulation of pH" evidence=IEA

GO:0007588 "excretion" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0016471 "vacuolar proton-transporting V-type ATPase complex" evidence=IEA

GO:0031526 "brush border membrane" evidence=IEA

GO:0051117 "ATPase binding" evidence=IEA

UNIPROTKB|B7Z641 ATP6V0A1 "cDNA FLJ54439, highly similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 168 (64.2 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
             MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct:     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|B7Z2A9 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 168 (64.2 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
             MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct:     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|F1PVS8 ATP6V0A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 168 (64.2 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 34/39 (87%), Positives = 34/39 (87%)

Query:     1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRD 39
             MG LFRSEEM L QLFLQSEAAY CVSELGELG VQFRD
Sbjct:     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9Z1G4	VPP1_MOUSE	No assigned EC number	0.8717	0.4285	0.0464	yes	N/A
P25286	VPP1_RAT	No assigned EC number	0.8461	0.4285	0.0465	yes	N/A
O13742	VPH1_SCHPO	No assigned EC number	0.5405	0.4065	0.0445	yes	N/A
Q93050	VPP1_HUMAN	No assigned EC number	0.8717	0.4285	0.0465	yes	N/A
P32563	VPH1_YEAST	No assigned EC number	0.5135	0.4065	0.0440	yes	N/A
Q54E04	VATM_DICDI	No assigned EC number	0.5675	0.4065	0.0453	yes	N/A
Q9I8D0	VPP1_CHICK	No assigned EC number	0.8717	0.4285	0.0465	yes	N/A
A1A5G6	VPP1_XENTR	No assigned EC number	0.8717	0.4285	0.0465	yes	N/A
Q29466	VPP1_BOVIN	No assigned EC number	0.8717	0.4285	0.0465	yes	N/A
Q5R422	VPP1_PONAB	No assigned EC number	0.8717	0.4285	0.0465	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	91
KOG2189|consensus	829		99.97
PF01496	759	V_ATPase_I: V-type ATPase 116kDa subunit family ;	99.01
PRK05771	646	V-type ATP synthase subunit I; Validated	97.6
COG1269	660	NtpI Archaeal/vacuolar-type H+-ATPase subunit I [E	90.46
PF09902	71	DUF2129: Uncharacterized protein conserved in bact	84.28
PRK02302	89	hypothetical protein; Provisional	83.14

>KOG2189|consensus

Probab=99.97  E-value=3.2e-31  Score=227.38  Aligned_cols=75  Identities=53%  Similarity=0.816  Sum_probs=71.9

Q ss_pred             CCCCccccCCceEEEEeecchHHHHHHHhhcccceeeeeCCCCCCCCCcchhhHHHHH---HHHHhhhhhhhhhh-hcc
Q psy653            1 MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSERLV---SSRVGFSDSGVIRV-VPC   75 (91)
Q Consensus         1 mgslfRSE~M~l~qL~ip~E~A~~~V~eLG~LglvqF~DLN~~v~~FqR~Fv~eIrRc---Er~l~~l~~ei~~~-~~~   75 (91)
                      ||||||||+|+|+|||+|+|+||+||++||++|+|||+|||++|++|||+||||||||   |||||||++||.+. +|.
T Consensus         1 ~~s~fRSE~M~L~Ql~l~~eaAy~~vaeLGelGlvqFrDLN~~v~afQR~fv~evrRcdemeRklrfl~~ei~k~~i~~   79 (829)
T KOG2189|consen    1 MGSLFRSEEMCLVQLFLQSEAAYQCVAELGELGLVQFRDLNPDVSAFQRKFVNEVRRCDEMERKLRFLESEIKKAGIPL   79 (829)
T ss_pred             CccccccccceeeEEEecHHHHHHHHHHhhccCeeEeeeCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            8999999999999999999999999999999999999999999999999999999999   69999999999994 443

>PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=99.01  E-value=5.4e-11  Score=101.04  Aligned_cols=47  Identities=34%  Similarity=0.545  Sum_probs=0.0

Q ss_pred             HHHhhcccceeeeeCCCCCCCCCcchhhHHHHH---HHHHhhhhhhhhhh
Q psy653           26 VSELGELGLVQFRDRDIPLGYLHFDRINSERLV---SSRVGFSDSGVIRV   72 (91)
Q Consensus        26 V~eLG~LglvqF~DLN~~v~~FqR~Fv~eIrRc---Er~l~~l~~ei~~~   72 (91)
                      |++||++|+|||+|+|+++++|||+|++++|||   ||+|+++++++.++
T Consensus         1 V~eLgelG~VqF~Dln~~~~~fqr~f~~ev~r~de~erkL~~le~~I~k~   50 (759)
T PF01496_consen    1 VNELGELGLVQFRDLNEDVSAFQRKFVNEVRRCDEMERKLRFLEEEIKKL   50 (759)
T ss_dssp             --------------------------------------------------
T ss_pred             CchhhcCCcEEEEECccchhHHHHHhhhccccHHHHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999   59999999999985

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents the 116kDa subunit (or subunit a) and subunit I found in the V0 or A0 complex of V- or A-ATPases, respectively. The 116kDa subunit is a transmembrane glycoprotein required for the assembly and proton transport activity of the ATPase complex. Several isoforms of the 116kDa subunit exist, providing a potential role in the differential targeting and regulation of the V-ATPase for specific organelles []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0015078 hydrogen ion transmembrane transporter activity, 0015991 ATP hydrolysis coupled proton transport, 0033177 proton-transporting two-sector ATPase complex, proton-transporting domain; PDB: 2RPW_X 2NVJ_A 2JTW_A 3RRK_A.

>PRK05771 V-type ATP synthase subunit I; Validated

Probab=97.60  E-value=0.00011  Score=61.96  Aligned_cols=67  Identities=15%  Similarity=0.031  Sum_probs=58.3

Q ss_pred             ccccCCceEEEEeecchHHHHHHHhhcccceeeeeCCCCCC-CCCcchhhHHHHHHHHHhhhhhhhhh
Q psy653            5 FRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLG-YLHFDRINSERLVSSRVGFSDSGVIR   71 (91)
Q Consensus         5 fRSE~M~l~qL~ip~E~A~~~V~eLG~LglvqF~DLN~~v~-~FqR~Fv~eIrRcEr~l~~l~~ei~~   71 (91)
                      ++.++|..++++.|.+.+.+++++|.++|.+|+.|++...+ ...+.+.+...++++.+++|++...+
T Consensus         1 m~i~kM~kv~l~~~~~~~~~~l~~L~~lg~vhi~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~   68 (646)
T PRK05771          1 LAPVRMKKVLIVTLKSYKDEVLEALHELGVVHIEDLKEELSNERLRKLRSLLTKLSEALDKLRSYLPK   68 (646)
T ss_pred             CCceeeEEEEEEEEHHHHHHHHHHHHhCCCEEEeecccccchhHHhHHHHHHHHHHHHHHHHHHhccc
Confidence            36789999999999999999999999999999999998875 55778888888888888888766554

>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion]

Probab=90.46  E-value=0.3  Score=42.17  Aligned_cols=43  Identities=23%  Similarity=0.283  Sum_probs=39.0

Q ss_pred             ccccCCceEEEEeecchHHHHHHHhhcccceeeeeCCCCCCCC
Q psy653            5 FRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYL   47 (91)
Q Consensus         5 fRSE~M~l~qL~ip~E~A~~~V~eLG~LglvqF~DLN~~v~~F   47 (91)
                      +|-+.|..+.++.+++..-+++.+|++.|++|+.|++.++..+
T Consensus         1 ~~~~~M~kv~i~~~~~~~~~vi~~L~~~g~~~~~d~~~~~~~~   43 (660)
T COG1269           1 MRPEKMKKVSIIGLKSELDPVLAELHDFGLVHLEDLEEGEKGL   43 (660)
T ss_pred             CchhhheeEEEEeehhhhhHHHHHHHHcCeEEeeccccccccc
Confidence            4789999999999999999999999999999999999776543

>PF09902 DUF2129: Uncharacterized protein conserved in bacteria (DUF2129); InterPro: IPR016979 This is a group of uncharacterised conserved proteins

Probab=84.28  E-value=1.8  Score=28.05  Aligned_cols=36  Identities=19%  Similarity=0.338  Sum_probs=32.4

Q ss_pred             ccccCCceEEEEeecchHHHHHHHhhcccceeeeeC
Q psy653            5 FRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDR   40 (91)
Q Consensus         5 fRSE~M~l~qL~ip~E~A~~~V~eLG~LglvqF~DL   40 (91)
                      +-|..|.++.||+..|.+-+++++|.++..|.-+..
T Consensus        25 Y~Skk~kYvvlYvn~~~~e~~~~kl~~l~fVk~Ve~   60 (71)
T PF09902_consen   25 YVSKKMKYVVLYVNEEDVEEIIEKLKKLKFVKKVEP   60 (71)
T ss_pred             EEECCccEEEEEECHHHHHHHHHHHhcCCCeeEEec
Confidence            568999999999999999999999999998876654

>PRK02302 hypothetical protein; Provisional

Probab=83.14  E-value=2.4  Score=28.73  Aligned_cols=51  Identities=14%  Similarity=0.148  Sum_probs=39.0

Q ss_pred             ccccCCceEEEEeecchHHHHHHHhhcccceeeeeCCCCCCCCCcchhhHHH
Q psy653            5 FRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLHFDRINSER   56 (91)
Q Consensus         5 fRSE~M~l~qL~ip~E~A~~~V~eLG~LglvqF~DLN~~v~~FqR~Fv~eIr   56 (91)
                      +=|..|.++-||+..|.|-+++.+|.++..|.-++..+- +-..-.|...+-
T Consensus        31 Y~Skk~kYvvlYvn~~~~e~~~~kl~~l~fVk~Ve~S~~-~~l~~~f~~~l~   81 (89)
T PRK02302         31 YHSKRSRYLVLYVNKEDVEQKLEELSKLKFVKKVRPSAI-DEIDQNFVGNLY   81 (89)
T ss_pred             EEeccccEEEEEECHHHHHHHHHHHhcCCCeeEEcccCc-hhccchhhhhhh
Confidence            458899999999999999999999999999988775542 222444544443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	91
3rrk_A	357	V-type ATPase 116 kDa subunit; alpha beta fold, pr	2e-10

>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357

 Score = 54.4 bits (130), Expect = 2e-10
 Identities = 7/40 (17%), Positives = 16/40 (40%)

Query: 2  GSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRD 41
          G++   ++M    +      A   ++EL + G+V      
Sbjct: 6  GTIDDDDKMEKLIVAGPKRLARELLAELQKAGVVHIDPLR 45

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	91
3rrk_A	357	V-type ATPase 116 kDa subunit; alpha beta fold, pr	99.2

>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}

Probab=99.20  E-value=1.2e-11  Score=94.09  Aligned_cols=71  Identities=14%  Similarity=-0.065  Sum_probs=55.7

Q ss_pred             CCCccccCCceEEEEeecchHHHHHHHhhcccceeeeeCCCCCCCCC--cchh-hHHHHHH---HHHhhhhhhhhhh
Q psy653            2 GSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDRDIPLGYLH--FDRI-NSERLVS---SRVGFSDSGVIRV   72 (91)
Q Consensus         2 gslfRSE~M~l~qL~ip~E~A~~~V~eLG~LglvqF~DLN~~v~~Fq--R~Fv-~eIrRcE---r~l~~l~~ei~~~   72 (91)
                      |.|+|-++|+.++|++|.+.+++++++||++|.|||.|+|++++.|+  ++|. +++++|+   ++++++.+.+.+.
T Consensus         6 ~~~~~pekM~kv~l~~~~~~~~~vl~~L~~lg~vhi~d~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~L~~~   82 (357)
T 3rrk_A            6 GTIDDDDKMEKLIVAGPKRLARELLAELQKAGVVHIDPLRPDELGEYRLSPTEEAELKRWEAVVSQAEQSLTVVGLA   82 (357)
T ss_dssp             --------CEEEEEEECGGGHHHHHHHHHHHTCEEEEEECGGGGGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             CCCCChhheEEEEEEeEHHHHHHHHHHHHHcCcEEEEeccccccccccCCccchHHHhHHHHHHHHHHHHHHHhccc
Confidence            67999999999999999999999999999999999999999999998  7766 5778874   7777777777654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00