Psyllid ID: psy6604

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-----
Protein Sequence
MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG
Secondary Structure (PSIPRED)
ccHHHHHHcHHHHcccccccHHHHHHHHHHHHccEEEEEcccHHHHHccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
HHHHHHHHHHHHHccccccEEEEcEHHHHHccccEEEEEcccHHHHHHHcccEEEccHHHHHHHcccHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MDKLVILFGTEILniipgrvstevdaslklkdYTVVVAdtgdfeamkkykptdattnpsliLQAATMPQYQHLINKAVEFGKQNG
Flexible Loop (DISEMBL)
MDKLVILFGteilniipgrvstevdaslklKDYTVVVadtgdfeamkkykptdattNPSLILQAATMPQYQHLINKAVEFGKQNG
Low Complexity Region (SEG)
MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG
Disordered region (IsUnstruct)
***LVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYK*****TNPSLILQAATMPQYQHLINKAV*******
Disordered Region (DISOPRED)
*DKLVILFGTE*******************KDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQ**
Disordered Region (DISEMBL)
MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG
Disordered Region (DISPRO)
MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	85	2.2.26 [Sep-21-2011]
Q9EQS0	337	Transaldolase OS=Rattus n	yes	N/A	0.752	0.189	0.567	3e-15
Q8VI73	337	Transaldolase OS=Cricetul	yes	N/A	0.752	0.189	0.567	3e-15
Q93092	337	Transaldolase OS=Mus musc	yes	N/A	0.752	0.189	0.567	3e-15
P37837	337	Transaldolase OS=Homo sap	yes	N/A	0.752	0.189	0.552	4e-15
Q2TBL6	337	Transaldolase OS=Bos taur	yes	N/A	0.658	0.166	0.614	4e-15
Q9W1G0	331	Probable transaldolase OS	yes	N/A	0.635	0.163	0.666	1e-14
A6VLW0	317	Transaldolase OS=Actinoba	yes	N/A	0.705	0.189	0.634	1e-14
A3QBW2	318	Transaldolase OS=Shewanel	yes	N/A	0.635	0.169	0.611	1e-14
Q65PZ8	317	Transaldolase OS=Mannheim	yes	N/A	0.705	0.189	0.587	1e-14
Q9CKL0	317	Transaldolase A OS=Pasteu	yes	N/A	0.705	0.189	0.571	2e-14

>sp|Q9EQS0|TALDO_RAT Transaldolase OS=Rattus norvegicus GN=Taldo1 PE=1 SV=2

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 3/67 (4%)

Query: 19 RVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAV 78
          R+ + +D   +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+
Sbjct: 10 RMESALD---QLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAI 66

Query: 79 EFGKQNG 85
           +GK+ G
Sbjct: 67 AYGKKLG 73

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 2EC: .EC: 1EC: .EC: 2

>sp|Q8VI73|TALDO_CRIGR Transaldolase OS=Cricetulus griseus GN=TALDO1 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 3/67 (4%)

Query: 19 RVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAV 78
          R+ + +D   +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+
Sbjct: 10 RMESALD---QLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAI 66

Query: 79 EFGKQNG 85
           +GK+ G
Sbjct: 67 AYGKKLG 73

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

Cricetulus griseus (taxid: 10029)

EC: 2

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

>sp|Q93092|TALDO_MOUSE Transaldolase OS=Mus musculus GN=Taldo1 PE=1 SV=2

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 3/67 (4%)

Query: 19 RVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAV 78
          R+ + +D   +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+
Sbjct: 10 RMESALD---QLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAI 66

Query: 79 EFGKQNG 85
           +GK+ G
Sbjct: 67 AYGKKLG 73

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

>sp|P37837|TALDO_HUMAN Transaldolase OS=Homo sapiens GN=TALDO1 PE=1 SV=2

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 50/67 (74%), Gaps = 3/67 (4%)

Query: 19 RVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAV 78
          R+ + +D   +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+
Sbjct: 10 RMESALD---QLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAI 66

Query: 79 EFGKQNG 85
           +G++ G
Sbjct: 67 AYGRKLG 73

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

>sp|Q2TBL6|TALDO_BOVIN Transaldolase OS=Bos taurus GN=TALDO1 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 45/57 (78%)

Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +G++ G
Sbjct: 17 QLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPTYQELVEEAIAYGRKLG 73

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

>sp|Q9W1G0|TALDO_DROME Probable transaldolase OS=Drosophila melanogaster GN=Tal PE=2 SV=2

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 44/54 (81%)

Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGK 82
          +LK  T +VADTGDFEA+  YKPTDATTNPSLIL A++M +YQ L+ KAVE+ K
Sbjct: 17 ELKKITTIVADTGDFEAINIYKPTDATTNPSLILSASSMERYQPLVQKAVEYAK 70

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

>sp|A6VLW0|TAL_ACTSZ Transaldolase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=tal PE=3 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 3/63 (4%)

Query: 20 VSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVE 79
          ++T++DA   LK  TVVVADTGD EAMK YKP DATTNPSLIL A+ +PQY  LI+ AV 
Sbjct: 1  MTTQLDA---LKQMTVVVADTGDIEAMKLYKPQDATTNPSLILSASALPQYVSLIDDAVA 57

Query: 80 FGK 82
          + K
Sbjct: 58 YAK 60

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

Actinobacillus succinogenes (strain ATCC 55618 / 130Z) (taxid: 339671)

EC: 2

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

>sp|A3QBW2|TAL_SHELP Transaldolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=tal PE=3 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/54 (61%), Positives = 44/54 (81%)

Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGK 82
          + K  T +VADTGD EA+K+Y+P DATTNPSLIL+AA +P+Y+HLI  A+E+ K
Sbjct: 7  QFKSITTIVADTGDIEAIKRYQPQDATTNPSLILKAAQIPEYKHLIANAIEWAK 60

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

Shewanella loihica (strain ATCC BAA-1088 / PV-4) (taxid: 323850)

EC: 2

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

>sp|Q65PZ8|TAL_MANSM Transaldolase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=tal PE=3 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 50/63 (79%), Gaps = 3/63 (4%)

Query: 20 VSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVE 79
          ++T++DA   L++ TVVVADTGD EA+KKY+P DATTNPSLIL A+ +PQY  LI+ A+ 
Sbjct: 1  MTTQLDA---LRNMTVVVADTGDIEAIKKYQPQDATTNPSLILSASALPQYASLIDDAIN 57

Query: 80 FGK 82
          + K
Sbjct: 58 YAK 60

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

Mannheimia succiniciproducens (strain MBEL55E) (taxid: 221988)

EC: 2

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

>sp|Q9CKL0|TALA_PASMU Transaldolase A OS=Pasteurella multocida (strain Pm70) GN=talA PE=3 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 51/63 (80%), Gaps = 3/63 (4%)

Query: 20 VSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVE 79
          ++T++D+   L++ TVVVADTGD EA+KKY+P DATTNPSLIL A+ +PQY  LI++A+ 
Sbjct: 1  MTTQLDS---LRNMTVVVADTGDIEAIKKYQPEDATTNPSLILSASALPQYASLIDEAIA 57

Query: 80 FGK 82
          + K
Sbjct: 58 YAK 60

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

Pasteurella multocida (strain Pm70) (taxid: 272843)

EC: 2

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
114052613	332	transaldolase [Bombyx mori] gi|95103094|	0.8	0.204	0.637	2e-18
346471493	334	hypothetical protein [Amblyomma maculatu	0.870	0.221	0.584	5e-18
157123140	333	transaldolase [Aedes aegypti] gi|1088745	0.752	0.192	0.707	1e-17
94469060	321	transaldolase [Aedes aegypti]	0.658	0.174	0.754	2e-17
239790714	207	ACYPI000582 [Acyrthosiphon pisum]	0.811	0.333	0.623	3e-17
321468103	320	hypothetical protein DAPPUDRAFT_304993 [	0.670	0.178	0.741	5e-17
328706639	333	PREDICTED: transaldolase-like isoform 1	0.811	0.207	0.623	5e-17
442754585	331	Putative transaldolase [Ixodes ricinus]	0.764	0.196	0.602	5e-17
241861621	219	transaldolase, putative [Ixodes scapular	0.670	0.260	0.684	6e-17
118793159	333	AGAP011800-PA [Anopheles gambiae str. PE	0.811	0.207	0.642	9e-17

>gi|114052613|ref|NP_001040544.1| transaldolase [Bombyx mori] gi|95103094|gb|ABF51488.1| transaldolase [Bombyx mori]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 56/69 (81%)

Query: 17 PGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINK 76
          P    T++ A  +LK ++ VVADTGDFEAMK+YKPTDATTNPSLIL AA M QYQH+++K
Sbjct: 5  PDTKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDK 64

Query: 77 AVEFGKQNG 85
          A+++GK NG
Sbjct: 65 AIKYGKDNG 73

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346471493|gb|AEO35591.1| hypothetical protein [Amblyomma maculatum]

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 3/77 (3%)

Query: 9  GTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMP 68
          G  I +I   ++S+ +D   +LK+ T VVADTGDFE MK+YKPTDATTNPSLIL A+ +P
Sbjct: 3  GDSIGSIKRAKMSSSLD---QLKEVTTVVADTGDFEVMKQYKPTDATTNPSLILAASKLP 59

Query: 69 QYQHLINKAVEFGKQNG 85
          QY HL+++AV++GK NG
Sbjct: 60 QYAHLVDEAVKYGKSNG 76

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123140|ref|XP_001660027.1| transaldolase [Aedes aegypti] gi|108874520|gb|EAT38745.1| AAEL009389-PA [Aedes aegypti]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)

Query: 22 TEVDASL-KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEF 80
          T++ +SL +LK  T +VADTGDFEAMK YKPTDATTNPSLIL AA MPQYQHLI+KAV++
Sbjct: 11 TKMGSSLEQLKQLTTIVADTGDFEAMKVYKPTDATTNPSLILSAAGMPQYQHLIDKAVKY 70

Query: 81 GKQNG 85
          G  +G
Sbjct: 71 GLAHG 75

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|94469060|gb|ABF18379.1| transaldolase [Aedes aegypti]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 49/57 (85%)

Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          +LK  T +VADTGDFEAMK YKPTDATTNPSLIL AA MPQYQHLI+KAV++G  +G
Sbjct: 7  QLKQLTTIVADTGDFEAMKVYKPTDATTNPSLILSAAGMPQYQHLIDKAVKYGLAHG 63

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239790714|dbj|BAH71901.1| ACYPI000582 [Acyrthosiphon pisum]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 54/69 (78%)

Query: 17 PGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINK 76
          P    +++ +  +LK++TVVVADTGDFE MKKYKPTDATTNPSLIL AA MPQY+ LI+K
Sbjct: 4  PSPKKSKISSLAQLKNFTVVVADTGDFETMKKYKPTDATTNPSLILAAAKMPQYKDLISK 63

Query: 77 AVEFGKQNG 85
          A++    NG
Sbjct: 64 ALKLAVANG 72

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321468103|gb|EFX79090.1| hypothetical protein DAPPUDRAFT_304993 [Daphnia pulex]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/58 (74%), Positives = 50/58 (86%), Gaps = 1/58 (1%)

Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGK-QNG 85
          +LK  T+VVADTGDFE M KYKPTDATTNPSL+L AAT+PQYQHL+ KAV++GK Q G
Sbjct: 5  QLKTMTIVVADTGDFETMIKYKPTDATTNPSLLLAAATLPQYQHLVQKAVDYGKTQEG 62

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706639|ref|XP_001945887.2| PREDICTED: transaldolase-like isoform 1 [Acyrthosiphon pisum] gi|328706641|ref|XP_003243159.1| PREDICTED: transaldolase-like isoform 2 [Acyrthosiphon pisum]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 54/69 (78%)

Query: 17 PGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINK 76
          P    +++ +  +LK++TVVVADTGDFE MKKYKPTDATTNPSLIL AA MPQY+ LI+K
Sbjct: 4  PSPKKSKISSLAQLKNFTVVVADTGDFETMKKYKPTDATTNPSLILAAAKMPQYKDLISK 63

Query: 77 AVEFGKQNG 85
          A++    NG
Sbjct: 64 ALKLAVANG 72

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442754585|gb|JAA69452.1| Putative transaldolase [Ixodes ricinus]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 56/68 (82%), Gaps = 3/68 (4%)

Query: 18 GRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKA 77
           ++S+ +D   +LK+ T VVADTGDFE MK+YKPTDATTNPSLIL A+ +PQY HL+++A
Sbjct: 9  SKMSSSLD---QLKEITTVVADTGDFEVMKQYKPTDATTNPSLILAASKLPQYSHLVDEA 65

Query: 78 VEFGKQNG 85
          V++GK+ G
Sbjct: 66 VQYGKKTG 73

Source: Ixodes ricinus

Species: Ixodes ricinus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241861621|ref|XP_002416341.1| transaldolase, putative [Ixodes scapularis] gi|215510555|gb|EEC20008.1| transaldolase, putative [Ixodes scapularis]

 Score = 91.7 bits (226), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 50/57 (87%)

Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          +LK+ T VVADTGDFE MK+YKPTDATTNPSLIL A+ +PQY HL+++AV++GK+ G
Sbjct: 7  QLKEITTVVADTGDFEVMKQYKPTDATTNPSLILAASKLPQYSHLVDEAVQYGKKTG 63

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118793159|ref|XP_320715.3| AGAP011800-PA [Anopheles gambiae str. PEST] gi|116117245|gb|EAA00399.3| AGAP011800-PA [Anopheles gambiae str. PEST]

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 45/70 (64%), Positives = 55/70 (78%), Gaps = 1/70 (1%)

Query: 17 PGRVSTEVDASL-KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLIN 75
          P    T++ +SL +LK  T +VADTGDFEAMK YKPTDATTNPSLIL AA M QYQHLI+
Sbjct: 6  PQTKKTKMASSLEQLKQLTTIVADTGDFEAMKTYKPTDATTNPSLILSAAGMEQYQHLID 65

Query: 76 KAVEFGKQNG 85
          KA++ G++ G
Sbjct: 66 KAIKHGQKAG 75

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
ZFIN|ZDB-GENE-030131-3277	337	taldo1 "transaldolase 1" [Dani	0.858	0.216	0.520	1.2e-15
UNIPROTKB|Q58DR3	213	TALDO1 "Transaldolase" [Bos ta	0.670	0.267	0.614	6.9e-15
UNIPROTKB|E9PKI8	93	TALDO1 "Transaldolase" [Homo s	0.670	0.612	0.614	6.9e-15
MGI|MGI:1274789	337	Taldo1 "transaldolase 1" [Mus	0.670	0.169	0.631	7.6e-15
RGD|620674	337	Taldo1 "transaldolase 1" [Ratt	0.670	0.169	0.631	7.6e-15
UNIPROTKB|F2Z393	318	TALDO1 "Transaldolase" [Homo s	0.670	0.179	0.614	1.3e-14
UNIPROTKB|G5E5C8	337	TALDO1 "Transaldolase" [Bos ta	0.670	0.169	0.614	1.7e-14
UNIPROTKB|Q2TBL6	337	TALDO1 "Transaldolase" [Bos ta	0.670	0.169	0.614	1.7e-14
UNIPROTKB|P37837	337	TALDO1 "Transaldolase" [Homo s	0.670	0.169	0.614	1.7e-14
FB|FBgn0023477	331	Tal "Tal" [Drosophila melanoga	0.635	0.163	0.666	2.6e-14

ZFIN|ZDB-GENE-030131-3277 taldo1 "transaldolase 1" [Danio rerio (taxid:7955)]

 Score = 199 (75.1 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 38/73 (52%), Positives = 54/73 (73%)

Query:    13 LNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQH 72
             +++ P +      A  ++K +TVVVADTGDF A+++YKP DATTNPSLIL AA MP YQ 
Sbjct:     1 MSVSPDKRRKMESALEQIKKFTVVVADTGDFNAIEEYKPQDATTNPSLILAAAKMPAYQP 60

Query:    73 LINKAVEFGKQNG 85
             L+++A+++G  NG
Sbjct:    61 LVDQAIKYGTANG 73

GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|Q58DR3 TALDO1 "Transaldolase" [Bos taurus (taxid:9913)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 35/57 (61%), Positives = 45/57 (78%)

Query:    29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
             +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +G++ G
Sbjct:    17 QLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPTYQELVEEAIAYGRKLG 73

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=IEA

UNIPROTKB|E9PKI8 TALDO1 "Transaldolase" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 35/57 (61%), Positives = 45/57 (78%)

Query:    29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
             +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +G++ G
Sbjct:    17 QLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGRKLG 73

GO:0003824 "catalytic activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

MGI|MGI:1274789 Taldo1 "transaldolase 1" [Mus musculus (taxid:10090)]

 Score = 192 (72.6 bits), Expect = 7.6e-15, P = 7.6e-15
 Identities = 36/57 (63%), Positives = 45/57 (78%)

Query:    29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
             +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +GK+ G
Sbjct:    17 QLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGKKLG 73

GO:0003824 "catalytic activity" evidence=IEA

GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006002 "fructose 6-phosphate metabolic process" evidence=ISO

GO:0006098 "pentose-phosphate shunt" evidence=ISO

GO:0009052 "pentose-phosphate shunt, non-oxidative branch" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0019682 "glyceraldehyde-3-phosphate metabolic process" evidence=ISO

GO:0030246 "carbohydrate binding" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0048029 "monosaccharide binding" evidence=ISO

RGD|620674 Taldo1 "transaldolase 1" [Rattus norvegicus (taxid:10116)]

 Score = 192 (72.6 bits), Expect = 7.6e-15, P = 7.6e-15
 Identities = 36/57 (63%), Positives = 45/57 (78%)

Query:    29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
             +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +GK+ G
Sbjct:    17 QLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGKKLG 73

GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006002 "fructose 6-phosphate metabolic process" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=IDA

GO:0009052 "pentose-phosphate shunt, non-oxidative branch" evidence=IDA

GO:0019682 "glyceraldehyde-3-phosphate metabolic process" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

GO:0048029 "monosaccharide binding" evidence=IDA

UNIPROTKB|F2Z393 TALDO1 "Transaldolase" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 1.3e-14, P = 1.3e-14
 Identities = 35/57 (61%), Positives = 45/57 (78%)

Query:    29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
             +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +G++ G
Sbjct:    17 QLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGRKLG 73

GO:0005737 "cytoplasm" evidence=IEA

GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

UNIPROTKB|G5E5C8 TALDO1 "Transaldolase" [Bos taurus (taxid:9913)]

 Score = 189 (71.6 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 35/57 (61%), Positives = 45/57 (78%)

Query:    29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
             +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +G++ G
Sbjct:    17 QLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPTYQELVEEAIAYGRKLG 73

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=IEA

UNIPROTKB|Q2TBL6 TALDO1 "Transaldolase" [Bos taurus (taxid:9913)]

 Score = 189 (71.6 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 35/57 (61%), Positives = 45/57 (78%)

Query:    29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
             +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +G++ G
Sbjct:    17 QLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPTYQELVEEAIAYGRKLG 73

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=IEA

UNIPROTKB|P37837 TALDO1 "Transaldolase" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 35/57 (61%), Positives = 45/57 (78%)

Query:    29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
             +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +G++ G
Sbjct:    17 QLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGRKLG 73

GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA;TAS

GO:0005737 "cytoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0005999 "xylulose biosynthetic process" evidence=TAS

GO:0006112 "energy reserve metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

FB|FBgn0023477 Tal "Tal" [Drosophila melanogaster (taxid:7227)]

 Score = 187 (70.9 bits), Expect = 2.6e-14, P = 2.6e-14
 Identities = 36/54 (66%), Positives = 44/54 (81%)

Query:    29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGK 82
             +LK  T +VADTGDFEA+  YKPTDATTNPSLIL A++M +YQ L+ KAVE+ K
Sbjct:    17 ELKKITTIVADTGDFEAINIYKPTDATTNPSLILSASSMERYQPLVQKAVEYAK 70

GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=IEA;NAS

GO:0009052 "pentose-phosphate shunt, non-oxidative branch" evidence=NAS

GO:0005737 "cytoplasm" evidence=IEA;NAS

GO:0006098 "pentose-phosphate shunt" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B3GZQ2	TAL_ACTP7	2, ., 2, ., 1, ., 2	0.6415	0.6235	0.1682	yes	N/A
B4RX40	TAL_ALTMD	2, ., 2, ., 1, ., 2	0.6415	0.6235	0.1661	yes	N/A
A5UIP9	TAL_HAEIG	2, ., 2, ., 1, ., 2	0.5555	0.7058	0.1892	yes	N/A
B1ZUE6	TAL_OPITP	2, ., 2, ., 1, ., 2	0.64	0.5882	0.1587	yes	N/A
B0UV30	TAL_HAES2	2, ., 2, ., 1, ., 2	0.5714	0.7058	0.1892	yes	N/A
A8FSH3	TAL_SHESH	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
Q9EQS0	TALDO_RAT	2, ., 2, ., 1, ., 2	0.5671	0.7529	0.1899	yes	N/A
P37837	TALDO_HUMAN	2, ., 2, ., 1, ., 2	0.5522	0.7529	0.1899	yes	N/A
A9L4T6	TAL_SHEB9	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
Q3YZ89	TAL2_SHISS	2, ., 2, ., 1, ., 2	0.5714	0.6588	0.1772	yes	N/A
A0L002	TAL_SHESA	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
Q0I1U0	TAL_HAES1	2, ., 2, ., 1, ., 2	0.5714	0.7058	0.1892	yes	N/A
P0A872	TALB_SHIFL	2, ., 2, ., 1, ., 2	0.6363	0.6470	0.1735	yes	N/A
Q326L3	TAL_SHIBS	2, ., 2, ., 1, ., 2	0.6363	0.6470	0.1735	yes	N/A
Q65PZ8	TAL_MANSM	2, ., 2, ., 1, ., 2	0.5873	0.7058	0.1892	yes	N/A
A5UCY0	TAL_HAEIE	2, ., 2, ., 1, ., 2	0.5714	0.7058	0.1892	yes	N/A
Q0HFX9	TAL_SHESM	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
Q5PDM6	TAL1_SALPA	2, ., 2, ., 1, ., 2	0.6181	0.6470	0.1735	yes	N/A
A6VLW0	TAL_ACTSZ	2, ., 2, ., 1, ., 2	0.6349	0.7058	0.1892	yes	N/A
Q07Z25	TAL_SHEFN	2, ., 2, ., 1, ., 2	0.5689	0.6823	0.1829	yes	N/A
Q0K979	TAL_CUPNH	2, ., 2, ., 1, ., 2	0.5964	0.6705	0.1792	yes	N/A
A3QBW2	TAL_SHELP	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
Q32KB0	TAL_SHIDS	2, ., 2, ., 1, ., 2	0.6363	0.6470	0.1735	yes	N/A
A3D1F5	TAL_SHEB5	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
A3MYD4	TAL_ACTP2	2, ., 2, ., 1, ., 2	0.6415	0.6235	0.1682	yes	N/A
B3R1I4	TAL_CUPTR	2, ., 2, ., 1, ., 2	0.5789	0.6588	0.1761	yes	N/A
A1RMN6	TAL_SHESW	2, ., 2, ., 1, ., 2	0.5925	0.6352	0.1698	yes	N/A
A4Y494	TAL_SHEPC	2, ., 2, ., 1, ., 2	0.5925	0.6352	0.1698	yes	N/A
A6WKC4	TAL_SHEB8	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
Q9W1G0	TALDO_DROME	2, ., 2, ., 1, ., 2	0.6666	0.6352	0.1631	yes	N/A
P45055	TAL_HAEIN	2, ., 2, ., 1, ., 2	0.5714	0.7058	0.1892	yes	N/A
Q93092	TALDO_MOUSE	2, ., 2, ., 1, ., 2	0.5671	0.7529	0.1899	yes	N/A
Q0HS72	TAL_SHESR	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
B0BRM0	TAL_ACTPJ	2, ., 2, ., 1, ., 2	0.6415	0.6235	0.1682	yes	N/A
P0A868	TALA_ECOL6	2, ., 2, ., 1, ., 2	0.5714	0.6588	0.1772	yes	N/A
Q8VI73	TALDO_CRIGR	2, ., 2, ., 1, ., 2	0.5671	0.7529	0.1899	yes	N/A
P66955	TALB_SALTY	2, ., 2, ., 1, ., 2	0.6181	0.6470	0.1735	yes	N/A
B8EFD7	TAL_SHEB2	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
Q8EBH2	TAL_SHEON	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
Q2TBL6	TALDO_BOVIN	2, ., 2, ., 1, ., 2	0.6140	0.6588	0.1661	yes	N/A
B1KIS4	TAL_SHEWM	2, ., 2, ., 1, ., 2	0.6111	0.6352	0.1698	yes	N/A
Q4QLG9	TAL_HAEI8	2, ., 2, ., 1, ., 2	0.5714	0.7058	0.1892	yes	N/A
Q9CKL0	TALA_PASMU	2, ., 2, ., 1, ., 2	0.5714	0.7058	0.1892	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	85
PRK05269	318	PRK05269, PRK05269, transaldolase B; Provisional	3e-30
PTZ00411	333	PTZ00411, PTZ00411, transaldolase-like protein; Pr	9e-27
PRK12346	316	PRK12346, PRK12346, transaldolase A; Provisional	2e-26
TIGR00874	317	TIGR00874, talAB, transaldolase	3e-25
cd00957	313	cd00957, Transaldolase_TalAB, Transaldolases inclu	4e-25
PRK12309	391	PRK12309, PRK12309, transaldolase/EF-hand domain-c	2e-19
PRK05269	318	PRK05269, PRK05269, transaldolase B; Provisional	7e-12
cd00957	313	cd00957, Transaldolase_TalAB, Transaldolases inclu	3e-10
PRK12346	316	PRK12346, PRK12346, transaldolase A; Provisional	8e-10
COG0176	239	COG0176, MipB, Transaldolase [Carbohydrate transpo	2e-09
pfam00923	244	pfam00923, Transaldolase, Transaldolase	4e-09
TIGR00874	317	TIGR00874, talAB, transaldolase	1e-08
PRK12309	391	PRK12309, PRK12309, transaldolase/EF-hand domain-c	3e-08
PTZ00411	333	PTZ00411, PTZ00411, transaldolase-like protein; Pr	4e-08
cd00439	252	cd00439, Transaldolase, Transaldolase	2e-07
pfam00923	244	pfam00923, Transaldolase, Transaldolase	0.003

>gnl|CDD|235381 PRK05269, PRK05269, transaldolase B; Provisional

 Score =  107 bits (271), Expect = 3e-30
 Identities = 36/56 (64%), Positives = 44/56 (78%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          LK +T VVADTGD EA+KKY+P DATTNPSLIL+AA +P+Y  LI+ AV + KQ  
Sbjct: 8  LKQFTTVVADTGDIEAIKKYQPQDATTNPSLILKAAQIPEYAPLIDDAVAWAKQQS 63

Length = 318

>gnl|CDD|240406 PTZ00411, PTZ00411, transaldolase-like protein; Provisional

 Score = 99.0 bits (247), Expect = 9e-27
 Identities = 34/55 (61%), Positives = 45/55 (81%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN 84
          LK++T VVADTGDF  +KK++P DATTNPSL+L AA MP+Y HLI+ A+++ K N
Sbjct: 8  LKEHTTVVADTGDFSLLKKFQPEDATTNPSLVLAAAQMPEYAHLIDDAIKYAKAN 62

Length = 333

>gnl|CDD|183458 PRK12346, PRK12346, transaldolase A; Provisional

 Score = 97.9 bits (244), Expect = 2e-26
 Identities = 33/56 (58%), Positives = 46/56 (82%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          +K +T VVAD+GD E+++ Y P DATTNPSL+L+AA +PQYQHLI+ A+ +GK+ G
Sbjct: 7  IKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLPQYQHLIDDAIAWGKKQG 62

Length = 316

>gnl|CDD|162081 TIGR00874, talAB, transaldolase

 Score = 94.8 bits (236), Expect = 3e-25
 Identities = 38/56 (67%), Positives = 47/56 (83%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          LK +TVVVADTGD EA+KKY+P DATTNPSLIL AA +P+Y  LI++AV +GK+ G
Sbjct: 6  LKQFTVVVADTGDIEAIKKYQPQDATTNPSLILAAAQLPKYAELIDEAVAWGKKQG 61

This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis [Energy metabolism, Pentose phosphate pathway]. Length = 317

>gnl|CDD|188644 cd00957, Transaldolase_TalAB, Transaldolases including both TalA and TalB

 Score = 94.6 bits (236), Expect = 4e-25
 Identities = 34/56 (60%), Positives = 46/56 (82%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          LK +T +VADTGDFEA+KK+KP DATTNPSLIL AA +P+Y  L+++A+ + K+ G
Sbjct: 6  LKKFTTIVADTGDFEAIKKFKPQDATTNPSLILAAAKLPEYNKLVDEAIAYAKKKG 61

Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution. Length = 313

>gnl|CDD|183426 PRK12309, PRK12309, transaldolase/EF-hand domain-containing protein; Provisional

 Score = 79.8 bits (197), Expect = 2e-19
 Identities = 29/55 (52%), Positives = 42/55 (76%)

Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQ 83
          +L+  TVVVADTGD +A++K+ P DATTNPSLI  AA MPQYQ ++++ +   ++
Sbjct: 8  QLRQMTVVVADTGDIQAIEKFTPRDATTNPSLITAAAQMPQYQSIVDETLRQARK 62

Length = 391

>gnl|CDD|235381 PRK05269, PRK05269, transaldolase B; Provisional

 Score = 58.6 bits (143), Expect = 7e-12
 Identities = 20/28 (71%), Positives = 23/28 (82%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDASL 28
           +DKL + FG EIL +IPGRVSTEVDA L
Sbjct: 74  IDKLAVNFGLEILKLIPGRVSTEVDARL 101

Length = 318

>gnl|CDD|188644 cd00957, Transaldolase_TalAB, Transaldolases including both TalA and TalB

 Score = 53.8 bits (130), Expect = 3e-10
 Identities = 21/28 (75%), Positives = 25/28 (89%)

Query: 1  MDKLVILFGTEILNIIPGRVSTEVDASL 28
          +DKL++ FGTEIL +IPGRVSTEVDA L
Sbjct: 72 LDKLLVNFGTEILKLIPGRVSTEVDARL 99

Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution. Length = 313

>gnl|CDD|183458 PRK12346, PRK12346, transaldolase A; Provisional

 Score = 52.8 bits (127), Expect = 8e-10
 Identities = 19/27 (70%), Positives = 21/27 (77%)

Query: 2   DKLVILFGTEILNIIPGRVSTEVDASL 28
           DKL + FG EIL  +PGRVSTEVDA L
Sbjct: 74  DKLAVNFGAEILKSVPGRVSTEVDARL 100

Length = 316

>gnl|CDD|223254 COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism]

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 10/58 (17%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPT----DATTNPSLILQAATMPQYQHLINKAVEFGKQ 83
          L  +  +  DT D E +KK  P       TTNPSLIL+A   P        AVEFGK+
Sbjct: 4  LSQWMELFLDTADIEEIKKLLPIGPVDGVTTNPSLILKAGAKP------RDAVEFGKE 55

Length = 239

>gnl|CDD|216195 pfam00923, Transaldolase, Transaldolase

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 36 VVADTGDFEAMKKYKP----TDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          +  DT D E +KK          TTNPS+ L+A    +Y  L ++A+   K+ G
Sbjct: 1  IWLDTADRELIKKLIEEGPIDGVTTNPSIFLKAI---EYSALYDEAIAEIKEIG 51

Length = 244

>gnl|CDD|162081 TIGR00874, talAB, transaldolase

 Score = 49.4 bits (118), Expect = 1e-08
 Identities = 20/28 (71%), Positives = 23/28 (82%)

Query: 1  MDKLVILFGTEILNIIPGRVSTEVDASL 28
          +DKL + FG EIL I+PGRVSTEVDA L
Sbjct: 72 LDKLAVNFGLEILKIVPGRVSTEVDARL 99

This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis [Energy metabolism, Pentose phosphate pathway]. Length = 317

>gnl|CDD|183426 PRK12309, PRK12309, transaldolase/EF-hand domain-containing protein; Provisional

 Score = 48.6 bits (116), Expect = 3e-08
 Identities = 18/28 (64%), Positives = 22/28 (78%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDASL 28
            D+L + FG +IL I+PGRVSTEVDA L
Sbjct: 78  FDRLAVAFGLKILKIVPGRVSTEVDARL 105

Length = 391

>gnl|CDD|240406 PTZ00411, PTZ00411, transaldolase-like protein; Provisional

 Score = 48.2 bits (115), Expect = 4e-08
 Identities = 20/27 (74%), Positives = 22/27 (81%)

Query: 2   DKLVILFGTEILNIIPGRVSTEVDASL 28
           DKL + FG EIL I+PGRVSTEVDA L
Sbjct: 85  DKLTVNFGVEILKIVPGRVSTEVDARL 111

Length = 333

>gnl|CDD|188631 cd00439, Transaldolase, Transaldolase

 Score = 45.8 bits (108), Expect = 2e-07
 Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 4/54 (7%)

Query: 36 VVADTGDFEAMKKYK----PTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
             DT D  A             TTNPS+I  A +     +   + +    ++ 
Sbjct: 2  PWYDTLDRPATDLLPLIRGVRGVTTNPSIIQAAISTSNAYNDQFRTLVESGKDI 55

Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates. Length = 252

>gnl|CDD|216195 pfam00923, Transaldolase, Transaldolase

 Score = 34.1 bits (79), Expect = 0.003
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 4  LVILFGTEILNIIPGRVSTEVDASL 28
            +  G EIL  I GRVS EVD  L
Sbjct: 59 EELRPGYEILKGIDGRVSLEVDPRL 83

Length = 244

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	85
PTZ00411	333	transaldolase-like protein; Provisional	99.87
PRK12346	316	transaldolase A; Provisional	99.83
TIGR00874	317	talAB transaldolase. This family includes the majo	99.79
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	99.77
PRK05269	318	transaldolase B; Provisional	99.73
cd00957	313	Transaldolase_TalAB Transaldolases including both	99.73
KOG2772|consensus	337		99.7
KOG2772|consensus	337		99.62
PTZ00411	333	transaldolase-like protein; Provisional	98.96
PRK12346	316	transaldolase A; Provisional	98.93
COG0176	239	MipB Transaldolase [Carbohydrate transport and met	98.88
TIGR00874	317	talAB transaldolase. This family includes the majo	98.79
cd00957	313	Transaldolase_TalAB Transaldolases including both	98.78
PRK05269	318	transaldolase B; Provisional	98.77
PRK12309	391	transaldolase/EF-hand domain-containing protein; P	98.74
PRK03343	368	transaldolase; Validated	98.66
cd00955	338	Transaldolase_like Transaldolase-like proteins fro	98.51
cd00439	252	Transaldolase Transaldolase. Enzymes found in the	98.39
TIGR00876	350	tal_mycobact transaldolase, mycobacterial type. Th	98.22
PF00923	287	Transaldolase: Transaldolase; InterPro: IPR001585	97.71
cd00956	211	Transaldolase_FSA Transaldolase-like fructose-6-ph	97.63
PRK01362	214	putative translaldolase; Provisional	97.4
COG0176	239	MipB Transaldolase [Carbohydrate transport and met	97.31
PRK09533	948	bifunctional transaldolase/phosoglucose isomerase;	97.19
TIGR00875	213	fsa_talC_mipB fructose-6-phosphate aldolase, TalC/	97.12
PRK12656	222	fructose-6-phosphate aldolase; Reviewed	97.06
TIGR02134	236	transald_staph transaldolase. This small family of	97.05
PRK12376	236	putative translaldolase; Provisional	96.95
PRK12653	220	fructose-6-phosphate aldolase; Reviewed	96.83
PRK12655	220	fructose-6-phosphate aldolase; Reviewed	96.76
PF00923	287	Transaldolase: Transaldolase; InterPro: IPR001585	96.16
PRK03343	368	transaldolase; Validated	95.8
cd00439	252	Transaldolase Transaldolase. Enzymes found in the	95.71
TIGR00876	350	tal_mycobact transaldolase, mycobacterial type. Th	95.68
cd00955	338	Transaldolase_like Transaldolase-like proteins fro	95.06

>PTZ00411 transaldolase-like protein; Provisional

Probab=99.87  E-value=1.8e-22  Score=158.14  Aligned_cols=62  Identities=55%  Similarity=0.852  Sum_probs=59.6

Q ss_pred             ccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhc
Q psy6604          23 EVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN   84 (85)
Q Consensus        23 em~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~   84 (85)
                      +||+|+|||++|+|||||||++.|++|+|+|+|||||||++|++.|+|++||+++++|+++.
T Consensus         1 m~~~L~~L~~~t~vv~Dt~d~~~i~~~~p~daTtNPslil~a~~~~~y~~li~~a~~~~~~~   62 (333)
T PTZ00411          1 MPNQLEALKEHTTVVADTGDFSLLKKFQPEDATTNPSLVLAAAQMPEYAHLIDDAIKYAKAN   62 (333)
T ss_pred             CCCHHHHhhCCeEEecCCCCHHHHHhcCCCCCCCCHHHHHHHhcChHHHHHHHHHHHHHhhc
Confidence            47899999999999999999999999999999999999999999999999999999998764

>PRK12346 transaldolase A; Provisional

Probab=99.83  E-value=6.8e-21  Score=148.51  Aligned_cols=62  Identities=53%  Similarity=0.939  Sum_probs=59.7

Q ss_pred             cccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhcC
Q psy6604          24 VDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG   85 (85)
Q Consensus        24 m~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~~   85 (85)
                      ||+|+|||++|+|||||||++.|++|+|+|+|||||||++|.+.|+|+++|+++++|+++.|
T Consensus         1 m~~L~~Lk~~t~vv~Dtgd~~~i~~~~p~daTtNPsli~~a~~~~~y~~li~~ai~~~~~~~   62 (316)
T PRK12346          1 MNQLDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLPQYQHLIDDAIAWGKKQG   62 (316)
T ss_pred             CChHHHhhCCeEEecCCCCHHHHHhcCCCccccCHHHHHHHhcChhhHHHHHHHHHHHHhcC
Confidence            79999999999999999999999999999999999999999999999999999999988653

>TIGR00874 talAB transaldolase

Probab=99.79  E-value=8.5e-20  Score=142.36  Aligned_cols=60  Identities=62%  Similarity=0.955  Sum_probs=57.8

Q ss_pred             ccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhc
Q psy6604          25 DASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN   84 (85)
Q Consensus        25 ~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~   84 (85)
                      |+|+|||++|+|||||||+++|++|+|+|+|||||||++|++.|.|+++|+++++|+++.
T Consensus         1 ~~L~~L~~~t~vv~Dtgd~~~I~~~~p~~aTtNPsi~~~A~~~~~Y~~~i~~~~~~~~~~   60 (317)
T TIGR00874         1 NQLDQLKQFTVVVADTGDIEAIKKYQPQDATTNPSLILAAAQLPKYAELIDEAVAWGKKQ   60 (317)
T ss_pred             ChHHHhhcCeEEEeCCCCHHHHHhCCCCccccCHHHHHHHhCChHHHHHHHHHHHHhhhc
Confidence            579999999999999999999999999999999999999999999999999999998765

This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=99.77  E-value=3.4e-19  Score=141.74  Aligned_cols=61  Identities=48%  Similarity=0.757  Sum_probs=58.5

Q ss_pred             cccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhc
Q psy6604          24 VDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN   84 (85)
Q Consensus        24 m~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~   84 (85)
                      +|+|+|||++|+||+||||++.|++|+|+|||||||||+++++.|.|+++|++++.|+++.
T Consensus         3 ~~~L~~L~~~t~vv~Dtgd~~~i~~~~p~~aTtNPsli~~a~~~~~y~~~i~~~~~~~~~~   63 (391)
T PRK12309          3 ASLLEQLRQMTVVVADTGDIQAIEKFTPRDATTNPSLITAAAQMPQYQSIVDETLRQARKE   63 (391)
T ss_pred             cCHHHHHHcCcEEecCCCCHHHHHhcCCCccccCHHHHHHHhCCHHHHHHHHHHHHHhhhc
Confidence            4899999999999999999999999999999999999999999999999999999998753

>PRK05269 transaldolase B; Provisional

Probab=99.73  E-value=2.1e-18  Score=134.18  Aligned_cols=61  Identities=59%  Similarity=0.882  Sum_probs=58.4

Q ss_pred             ccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhh
Q psy6604          23 EVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQ   83 (85)
Q Consensus        23 em~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~   83 (85)
                      +|++|+|||++|+||+||||++.|++|.|+|+|||||||++|.+.+.|+++|++++.+++.
T Consensus         1 ~~~~L~~L~~~t~vv~Dtgdl~~i~~~~p~g~TtNPsli~ka~~~~~Y~~~i~~~~~~~~~   61 (318)
T PRK05269          1 MTNKLEQLKQFTTVVADTGDIEAIKKYQPQDATTNPSLILKAAQIPEYAPLIDDAVAWAKQ   61 (318)
T ss_pred             CCCHHHHHHhCCEEEcCCCCHHHHHhcCCCceeeCHHHHHHHhcCHhHHHHHHHHHHhhcc
Confidence            4689999999999999999999999999999999999999999999999999999998765

>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB

Probab=99.73  E-value=2.8e-18  Score=133.47  Aligned_cols=60  Identities=55%  Similarity=0.936  Sum_probs=57.7

Q ss_pred             ccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhc
Q psy6604          25 DASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN   84 (85)
Q Consensus        25 ~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~   84 (85)
                      |+|+|||++|+||+||||++.|++|.|+|+|||||||++|.+.|.|+++|++++.|+++.
T Consensus         1 ~~L~~L~~~t~vv~Dtgdl~~I~~~~p~gaTtNPsli~ka~~~~~y~~~i~~~~~~~~~~   60 (313)
T cd00957           1 NQLDQLKKFTTIVADTGDFEAIKKFKPQDATTNPSLILAAAKLPEYNKLVDEAIAYAKKK   60 (313)
T ss_pred             ChHHHhhcCcEEEecCCCHHHHHhcCCCeeeeCHHHHHHHhcCHHHHHHHHHHHHHhhhc
Confidence            579999999999999999999999999999999999999999999999999999998765

The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.

>KOG2772|consensus

Probab=99.70  E-value=8.9e-18  Score=132.04  Aligned_cols=62  Identities=60%  Similarity=0.877  Sum_probs=59.4

Q ss_pred             cccccccccc-eeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhcC
Q psy6604          24 VDASLKLKDY-TVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG   85 (85)
Q Consensus        24 m~~L~~Lk~~-T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~~   85 (85)
                      |+.|+||++. |+||+|||||+.|..|+|+|+|||||||++|++++.|+++++.+++|+|+++
T Consensus        13 ~ssL~qLk~~~t~vvadtgDf~~i~~~~p~daTtnpSlil~as~~~~y~~~~~~aveygk~~~   75 (337)
T KOG2772|consen   13 RSSLEQLKASGTVVVADTGDFLAIIEYKPQDATTNPSLILAASKMPAYAELFDTAVEYGKKHG   75 (337)
T ss_pred             HhhHHHHHhccCeeecCccchHHHHhcCCCCCccCHHHHHhhhccHhHHHHHHHHHHHHHHhc
Confidence            5789999999 9999999999999999999999999999999999999999999999999864

>KOG2772|consensus

Probab=99.62  E-value=4.2e-17  Score=128.23  Aligned_cols=70  Identities=37%  Similarity=0.483  Sum_probs=67.6

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      ||+++|+||.+|+++||||||||+|++.++++.++|.   +...+|+.|+..|+...+.||+.|++||++++.
T Consensus        86 idr~~v~fg~dilk~vpGrVStEVdaRLsfDTq~tve---kA~~Likly~~~gv~k~rvliKI~sTwegI~Aa  155 (337)
T KOG2772|consen   86 IDRACVLFGTDILKGVPGRVSTEVDARLSFDTQGTVE---KARHLIKLYNEEGVPKERVLIKIASTWEGIQAA  155 (337)
T ss_pred             HHHHHHHhChhhhhcCCCeeeeeecccccccchhHHH---HHHHHHHHHHhcCCChheEEEecccccchhHHH
Confidence            5899999999999999999999999999999999999   899999999999999999999999999999863

>PTZ00411 transaldolase-like protein; Provisional

Probab=98.96  E-value=9.6e-11  Score=92.25  Aligned_cols=70  Identities=40%  Similarity=0.539  Sum_probs=65.6

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ...+.++.|+..++..++.+|+.|++|++++..
T Consensus        84 ~d~l~v~~g~~i~~~i~G~VS~EVd~~ls~d~e~~i~---~A~~l~~l~~~~gi~~~rilIKIPaT~eGi~Aa  153 (333)
T PTZ00411         84 VDKLTVNFGVEILKIVPGRVSTEVDARLSFDKQAMVD---KARKIIKMYEEAGISKDRILIKLASTWEGIQAA  153 (333)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEccccccCHHHHHH---HHHHHHHhhhhhcCCCCcEEEEeCCCHHHHHHH
Confidence            4899999999999999999999999999999998887   789999999999999999999999999998764

>PRK12346 transaldolase A; Provisional

Probab=98.93  E-value=1.4e-10  Score=90.85  Aligned_cols=70  Identities=34%  Similarity=0.438  Sum_probs=66.1

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ...++++.|+..++...+.+|+.+++|+++++.
T Consensus        73 ~D~l~v~~g~ei~~~v~G~Vs~EVdp~la~d~e~~i~---~A~~l~~l~~~~gi~~~~i~IKIPaT~eGi~A~  142 (316)
T PRK12346         73 CDKLAVNFGAEILKSVPGRVSTEVDARLSFDREKSIE---KARHLVDLYQQQGIDKSRILIKLASTWEGIRAA  142 (316)
T ss_pred             HHHHHHHHHHHHhcCCCCcEEEEEccccccCHHHHHH---HHHHHHHHhhhcCCCCCcEEEEeCCCHHHHHHH
Confidence            5899999999999999999999999999999999997   789999999999999999999999999998864

>COG0176 MipB Transaldolase [Carbohydrate transport and metabolism]

Probab=98.88  E-value=7.9e-10  Score=84.18  Aligned_cols=41  Identities=41%  Similarity=0.536  Sum_probs=37.7

Q ss_pred             ccccccceeeeeccccHHHHHhhCC----CCCCCChHHHHhhhCc
Q psy6604          27 SLKLKDYTVVVADTGDFEAMKKYKP----TDATTNPSLILQAATM   67 (85)
Q Consensus        27 L~~Lk~~T~VvADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~~   67 (85)
                      ++++++++.+++||+|++.|++|.|    .|+|||||||++|.+.
T Consensus         1 ~~~~~~~~~~~~Dt~d~~eikk~~~~g~v~GvTTNPSli~ka~~~   45 (239)
T COG0176           1 LDGLSQWMELFLDTADIEEIKKLLPIGPVDGVTTNPSLILKAGAK   45 (239)
T ss_pred             CchhhhhHhheecccCHHHHHHhhhcCCcCCcCCCHHHHHhhccc
Confidence            4678888999999999999999999    9999999999999853

>TIGR00874 talAB transaldolase

Probab=98.79  E-value=7.6e-10  Score=86.72  Aligned_cols=70  Identities=39%  Similarity=0.503  Sum_probs=65.9

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ...++++.|+..++.....+|+.+++|++++..
T Consensus        72 ~D~l~v~~g~~i~~~i~G~VS~EVdprls~d~~~~i~---~A~~l~~l~~~~gi~~~~v~IKIPaT~eGi~A~  141 (317)
T TIGR00874        72 LDKLAVNFGLEILKIVPGRVSTEVDARLSFDTEATVE---KARHLIKLYEDAGVDKKRILIKIASTWEGIRAA  141 (317)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEecccccCHHHHHH---HHHHHHHHhHhcCCCCCcEEEEeCCCHHHHHHH
Confidence            5899999999999999999999999999999998887   788999999999999999999999999999876

This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.

>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB

Probab=98.78  E-value=9e-10  Score=86.06  Aligned_cols=70  Identities=41%  Similarity=0.554  Sum_probs=65.5

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ...++++.|+..++...+.+|+.+++|++++..
T Consensus        72 ~d~l~v~~~~~i~~~i~G~Vs~EVdp~la~d~~~~i~---~A~~l~~~~~~~gi~~~~i~IKIPaT~eGi~A~  141 (313)
T cd00957          72 LDKLLVNFGTEILKLIPGRVSTEVDARLSFDTNATIA---KARKLIKLYEEAGIDKERILIKIAATWEGIQAA  141 (313)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEecccccCHHHHHH---HHHHHHHHhHhcCCCCCcEEEEeCCCHHHHHHH
Confidence            4899999999999999999999999999999998887   788999999999999999999999999999876

The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.

>PRK05269 transaldolase B; Provisional

Probab=98.77  E-value=1e-09  Score=85.75  Aligned_cols=70  Identities=36%  Similarity=0.505  Sum_probs=65.6

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++||+||+|++++.+.+...+|.   ...++++.|+..++..+..+|+.+++|++++..
T Consensus        74 ~d~l~v~~g~ei~~~i~G~Vs~EVdp~l~~d~~~~i~---~A~~l~~~~~~~gi~~~~v~IKIPaT~eGi~A~  143 (318)
T PRK05269         74 IDKLAVNFGLEILKLIPGRVSTEVDARLSFDTEATIA---KARKLIALYEEAGISKDRILIKIASTWEGIRAA  143 (318)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEecccccCHHHHHH---HHHHHHHHhhhcCCCCCcEEEEeCCCHHHHHHH
Confidence            5899999999999999999999999999999998887   788999999999999988999999999999876

>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional

Probab=98.74  E-value=1.6e-09  Score=86.70  Aligned_cols=70  Identities=33%  Similarity=0.491  Sum_probs=65.1

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ....+++.|+..++...+.+|+.+++|++++..
T Consensus        78 ~d~l~v~~g~~i~~~i~G~Vs~EVdprl~~d~~~~i~---~A~~l~~~~~~~gi~~~~v~IKIPaT~eGi~A~  147 (391)
T PRK12309         78 FDRLAVAFGLKILKIVPGRVSTEVDARLSYDTEATIA---KARKLISLYEDAGISRDRVLIKIASTWEGIKAA  147 (391)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEecccccCHHHHHH---HHHHHHHHhhhhcCCCCcEEEEeCCCHHHHHHH
Confidence            4899999999999999999999999999999988887   788899999999999889999999999998865

>PRK03343 transaldolase; Validated

Probab=98.66  E-value=2.8e-08  Score=79.42  Aligned_cols=60  Identities=17%  Similarity=0.262  Sum_probs=48.6

Q ss_pred             ccccccccccee-eeec--------cccHH-HHHhhCCCCCCCChHHHHhhh-CchHHHHHHHHHHHhhhh
Q psy6604          24 VDASLKLKDYTV-VVAD--------TGDFE-AMKKYKPTDATTNPSLILQAA-TMPQYQHLINKAVEFGKQ   83 (85)
Q Consensus        24 m~~L~~Lk~~T~-VvAD--------Tgd~~-~I~~y~p~DaTTNPSLIl~Aa-~~~~y~~li~~a~~~~~~   83 (85)
                      |+.|.+|.++.. +=+|        ||+|. +|++|.|+|+|||||++.+|. +.+.|++.|++.+++++.
T Consensus         2 ~~~l~~l~~~g~s~WlD~i~R~~l~~g~l~~lI~~~g~~GaTsNPsIf~~Ai~~~~~Y~~~i~~l~~~~~~   72 (368)
T PRK03343          2 MNPLQALSALGQSIWLDDLSRDRLTSGNLARLIDEKGVVGVTSNPAIFQKAIAGGDAYDAQIAELAAAGAD   72 (368)
T ss_pred             CcHHHHHHHcCcEEeecCCccccccCcCHHHHHHhCCCCeeccCHHHHHHHHhCCHHHHHHHHHHHHhcCC
Confidence            455666655533 3344        59999 899999999999999999999 789999999999987653

>cd00955 Transaldolase_like Transaldolase-like proteins from plants and bacteria

Probab=98.51  E-value=1.1e-07  Score=75.28  Aligned_cols=45  Identities=20%  Similarity=0.278  Sum_probs=41.5

Q ss_pred             eccccHHHH-HhhCCCCCCCChHHHHhhhCc-hHHHHHHHHHHHhhh
Q psy6604          38 ADTGDFEAM-KKYKPTDATTNPSLILQAATM-PQYQHLINKAVEFGK   82 (85)
Q Consensus        38 ADTgd~~~I-~~y~p~DaTTNPSLIl~Aa~~-~~y~~li~~a~~~~~   82 (85)
                      -|||++..| ++|.|.|+|||||++++|.+. +.|+++|++.+.+++
T Consensus        12 l~~g~l~~li~~~~~~g~TsNPsi~~~Ai~~~~~y~~~i~~~~~~~~   58 (338)
T cd00955          12 IDNGFLKRLIEEQGVVGVTSNPAIFEKAIAGSAAYDDQIRALKGQGL   58 (338)
T ss_pred             ccccCHHHHHHhCCCceeccCHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence            478999988 999999999999999999988 999999999988753

Transaldolase is found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.

>cd00439 Transaldolase Transaldolase

Probab=98.39  E-value=3.7e-07  Score=69.03  Aligned_cols=47  Identities=23%  Similarity=0.067  Sum_probs=42.3

Q ss_pred             eeeccccHHHHHhhC----CCCCCCChHHHHhhhCchHHHHHHHHHHHhhh
Q psy6604          36 VVADTGDFEAMKKYK----PTDATTNPSLILQAATMPQYQHLINKAVEFGK   82 (85)
Q Consensus        36 VvADTgd~~~I~~y~----p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~   82 (85)
                      +..||.|++.|+++.    +.|+|||||+++++...+.|.+.+.+++.+++
T Consensus         2 ~~lDt~d~~~i~~~~~~~~~~GvTTNPsiv~~~~~~~~~~~~~~~~l~~~~   52 (252)
T cd00439           2 PWYDTLDRPATDLLPLIRGVRGVTTNPSIIQAAISTSNAYNDQFRTLVESG   52 (252)
T ss_pred             EEeeCCCHHHHHHhhccCCCCeeccCHHHHHHHhcCchhhHHHHHHHHHcc
Confidence            568999999999988    99999999999999999999999988887654

Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.

>TIGR00876 tal_mycobact transaldolase, mycobacterial type

Probab=98.22  E-value=1.3e-06  Score=69.68  Aligned_cols=41  Identities=32%  Similarity=0.428  Sum_probs=36.5

Q ss_pred             ccccH-HHHHhhCCCCCCCChHHHHhhhCch-HHHHHHHHHHH
Q psy6604          39 DTGDF-EAMKKYKPTDATTNPSLILQAATMP-QYQHLINKAVE   79 (85)
Q Consensus        39 DTgd~-~~I~~y~p~DaTTNPSLIl~Aa~~~-~y~~li~~a~~   79 (85)
                      ++||| ++|+++.|.|+|||||++.+|.+.+ .|++.|++...
T Consensus        16 ~~G~l~~lI~~~~~~G~TsNPsif~~Ai~~~~~Y~~~i~~l~~   58 (350)
T TIGR00876        16 ENGDFLELIDKGAICGATSNPSIFCEAISEGAFYDAEIAELAA   58 (350)
T ss_pred             cCCCHHHHHHhCCCCcccCCHHHHHHHHhCCHHHHHHHHHHHh
Confidence            45999 9999999999999999999999876 59999988654

This model describes one of three related but easily separable famiiles of known and putative transaldolases. This family and the family typified by E. coli TalA and TalB both contain experimentally verified examples.

>PF00923 Transaldolase: Transaldolase; InterPro: IPR001585 Transaldolase (2

Probab=97.71  E-value=2.1e-05  Score=59.76  Aligned_cols=42  Identities=31%  Similarity=0.491  Sum_probs=32.2

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhhhC-chHHHHHHHHH
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQAAT-MPQYQHLINKA   77 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~-~~~y~~li~~a   77 (85)
                      +-.||.|++.|+++.|    .|+||||+|+.+|.. ...|...+.+.
T Consensus         1 i~~Dsad~~~i~~~~~~~~~~GvTTNPsii~~a~~~~~~~~~~i~~l   47 (287)
T PF00923_consen    1 IWLDSADRDEIKELLPNGGIDGVTTNPSIIAKALSGSEAYDEAIKEL   47 (287)
T ss_dssp             EEEESSSHHHHHHHHHTTTESEEEE-HHHHHHHHTGHHHHHHHHHHH
T ss_pred             CCccCCCHHHHHHHhhccccCCCccCHHHHHHHHcccccHHHHHHHH
Confidence            3579999999999999    999999999999977 22444444433

2.1.2 from EC) catalyses the reversible transfer of a three-carbon ketol unit from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate to form erythrose 4-phosphate and fructose 6-phosphate. This enzyme, together with transketolase, provides a link between the glycolytic and pentose-phosphate pathways. Transaldolase is an enzyme of about 34 kDa whose sequence has been well conserved throughout evolution. A lysine has been implicated [] in the catalytic mechanism of the enzyme; it acts as a nucleophilic group that attacks the carbonyl group of fructose-6-phosphate.; GO: 0005975 carbohydrate metabolic process; PDB: 3R5E_A 1F05_A 1I2P_A 1UCW_A 1ONR_A 1I2O_B 3KOF_A 3CWN_B 1I2N_A 1I2Q_A ....

>cd00956 Transaldolase_FSA Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases

Probab=97.63  E-value=7.7e-05  Score=54.92  Aligned_cols=44  Identities=32%  Similarity=0.527  Sum_probs=33.6

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhhhCchHHHHHHHHHHHh
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQAATMPQYQHLINKAVEF   80 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~~~~y~~li~~a~~~   80 (85)
                      +-.||.|++.|+++.+    .++||||||+.++-. +.|...+.+..+.
T Consensus         2 ~~lDsa~~~ei~~~~~~~~i~GvTTNPsll~k~~~-~~~~~~~~~i~~~   49 (211)
T cd00956           2 IFLDTADLEEIKKASETGLLDGVTTNPSLIAKSGR-IDFEAVLKEICEI   49 (211)
T ss_pred             EEecCCCHHHHHHHHhcCCcCccccCHHHHHhcCC-cCHHHHHHHHHHh
Confidence            3479999999999998    599999999998644 3455566555443

FSA catalyze an aldol cleavage of fructose 6-phosphate and do not utilize fructose, fructose 1-phosphate, fructose 1,6-phosphate, or dihydroxyacetone phosphate. The enzymes belong to the transaldolase family that serves in transfer reactions in the pentose phosphate cycle, and are more distantly related to fructose 1,6-bisphosphate aldolase.

>PRK01362 putative translaldolase; Provisional

Probab=97.40  E-value=0.00018  Score=53.66  Aligned_cols=42  Identities=29%  Similarity=0.472  Sum_probs=32.3

Q ss_pred             eeeccccHHHHHhhCCC----CCCCChHHHHhhhCchHHHHHHHHHHH
Q psy6604          36 VVADTGDFEAMKKYKPT----DATTNPSLILQAATMPQYQHLINKAVE   79 (85)
Q Consensus        36 VvADTgd~~~I~~y~p~----DaTTNPSLIl~Aa~~~~y~~li~~a~~   79 (85)
                      +-.||.|++.|+++.+.    ++||||||+.++-.  .|.+++.+..+
T Consensus         3 ~~lDsA~~~ei~~~~~~~~i~GvTTNPsll~k~g~--~~~~~~~~i~~   48 (214)
T PRK01362          3 FFIDTANVEEIKEANELGVLDGVTTNPSLIAKEGR--DFEEVIKEICS   48 (214)
T ss_pred             EEEecCCHHHHHHHHhCCCcceEcCCHHHHHhcCC--CHHHHHHHHHH
Confidence            45799999999988874    89999999999753  45555555543

>COG0176 MipB Transaldolase [Carbohydrate transport and metabolism]

Probab=97.31  E-value=5.1e-05  Score=58.06  Aligned_cols=61  Identities=31%  Similarity=0.397  Sum_probs=49.5

Q ss_pred             hHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHH
Q psy6604           3 KLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQH   72 (85)
Q Consensus         3 k~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~   72 (85)
                      +.++.||.++++++|||| +|++++.+++...+|-   ...++++.|.-.+     .+|+.|++|++++.
T Consensus        47 ~~~~~~~~ei~~~v~G~v-~e~~~~ls~d~e~mi~---eA~~L~~~~~~~~-----i~IKIP~T~eGl~A  107 (239)
T COG0176          47 RDAVEFGKEILKIVPGRV-TEVDEVLSFDAEAMIE---EARRLAKLIDNVG-----IVIKIPATWEGLKA  107 (239)
T ss_pred             ccHHHHHHHHHhcCCCCC-eEeeeeecccHHHHHH---HHHHHHHhcCcCC-----eEEEeCCCHHHHHH
Confidence            457899999999999999 9999999999988886   5566666665544     67888888888654

>PRK09533 bifunctional transaldolase/phosoglucose isomerase; Validated

Probab=97.19  E-value=0.00047  Score=60.95  Aligned_cols=58  Identities=21%  Similarity=0.298  Sum_probs=44.5

Q ss_pred             ccccccccccee-eeec--------cccHHH-HHhhCCCCCCCChHHHHhhhC-chHHHHHHHHHHHhh
Q psy6604          24 VDASLKLKDYTV-VVAD--------TGDFEA-MKKYKPTDATTNPSLILQAAT-MPQYQHLINKAVEFG   81 (85)
Q Consensus        24 m~~L~~Lk~~T~-VvAD--------Tgd~~~-I~~y~p~DaTTNPSLIl~Aa~-~~~y~~li~~a~~~~   81 (85)
                      ||.|.+|.++.. +=.|        +|++.. |+.+.+.++|||||++.+|.. .+.|++.|.+.+.++
T Consensus         1 ~~~l~~l~~~gqsiWlD~l~R~~l~~g~l~~li~~~~~~GvTsNPsIf~~Ai~~~~~Y~~~i~~l~~~~   69 (948)
T PRK09533          1 MNPLKALAQHGQSVWLDFLARGFIAKGELKRLVEEDGLRGVTSNPAIFEKAIGSSDEYDDAIKAALAEG   69 (948)
T ss_pred             CchHHHHHHcCcEEeecccchhcccCchHHHHHHhCCCceeecCHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence            345555555432 3344        488776 999999999999999999975 799999999988765

>TIGR00875 fsa_talC_mipB fructose-6-phosphate aldolase, TalC/MipB family

Probab=97.12  E-value=0.00047  Score=51.31  Aligned_cols=42  Identities=31%  Similarity=0.456  Sum_probs=31.9

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhhhCchHHHHHHHHHHH
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQAATMPQYQHLINKAVE   79 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~~~~y~~li~~a~~   79 (85)
                      +-.||.|++.|+++.+    .++||||||+.++-.  .|..++.+..+
T Consensus         3 ~~lDsAd~~~i~~~~~~~~i~GvTTNPsll~k~g~--~~~~~~~~i~~   48 (213)
T TIGR00875         3 FFLDTANVEEIKKAAELGILAGVTTNPSLIAKEGR--SFWEVLKEIQE   48 (213)
T ss_pred             EEEcCCCHHHHHHHHhcCCcceEeCCHHHHHhcCC--CHHHHHHHHHH
Confidence            3469999999999887    688999999998754  25555555443

This model represents a family that includes the E. coli transaldolase homologs TalC and MipB, both shown to be fructose-6-phosphate aldolases rather than transaldolases as previously thought. It is related to but distinct from the transaldolase family of E. coli TalA and TalB. The member from Bacillus subtilis becomes phosphorylated during early stationary phase but not during exponential growth.

>PRK12656 fructose-6-phosphate aldolase; Reviewed

Probab=97.06  E-value=0.00045  Score=51.91  Aligned_cols=42  Identities=29%  Similarity=0.417  Sum_probs=31.5

Q ss_pred             eccccHHHHHhhCC----CCCCCChHHHHhhhCchHHHHHHHHHHHh
Q psy6604          38 ADTGDFEAMKKYKP----TDATTNPSLILQAATMPQYQHLINKAVEF   80 (85)
Q Consensus        38 ADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~~~~y~~li~~a~~~   80 (85)
                      -||.|++.|+++.+    .++||||||+.++.. ..|..++.+..+.
T Consensus         5 lDtAd~~~i~~~~~~~~i~GvTTNPsll~k~g~-~~~~~~~~~i~~~   50 (222)
T PRK12656          5 LDTLNLEAIKKWHEILPLAGVTSNPSIAKKEGD-IDFFERIREVREI   50 (222)
T ss_pred             EecCCHHHHHHHHhcCCcceEeCCHHHHHhcCC-CCHHHHHHHHHHH
Confidence            59999999988876    689999999999742 2455666555443

>TIGR02134 transald_staph transaldolase

Probab=97.05  E-value=0.00038  Score=52.94  Aligned_cols=43  Identities=35%  Similarity=0.560  Sum_probs=33.3

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhhhCchHHHHHHHHHHH
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQAATMPQYQHLINKAVE   79 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~~~~y~~li~~a~~   79 (85)
                      +-.||.|++.|+++.+    .++||||||+.++. ...|..++.+.++
T Consensus         8 ~flDtAd~~ei~~~~~~g~i~GvTTNPsll~k~g-~~~~~~~~~~i~~   54 (236)
T TIGR02134         8 VFADGANLEEMVKFSTHPYVKGFTTNPSLMRKAG-IVDYEAFAHEALA   54 (236)
T ss_pred             EEEeCCCHHHHHHHHhCCCeeEEeCCHHHHHhcC-CCCHHHHHHHHHH
Confidence            5579999999998887    57999999999864 2346677766543

This small family of proteins is a member of the transaldolase sybfamily represented by pfam00923. Coxiella and Staphylococcus lack members of the known transaldolase equivalog families and appear to require a transaldolase activity for completion of the pentose phosphate pathway.

>PRK12376 putative translaldolase; Provisional

Probab=96.95  E-value=0.00053  Score=52.02  Aligned_cols=42  Identities=31%  Similarity=0.451  Sum_probs=31.9

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhhhCchHHHHHHHHHH
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQAATMPQYQHLINKAV   78 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~~~~y~~li~~a~   78 (85)
                      +-.||.|++.|+++.+    .++||||||+.++.. ..|..++.+..
T Consensus         8 ~flDtAd~~eik~~~~~g~i~GVTTNPsll~k~g~-~~~~~~~~~i~   53 (236)
T PRK12376          8 IFADGADLEEMLAAYKNPLVKGFTTNPSLMRKAGV-TDYKAFAKEVL   53 (236)
T ss_pred             EEEecCCHHHHHHHHhCCCeeEEECCHHHHHhcCC-CCHHHHHHHHH
Confidence            4579999999999887    579999999999743 23555555543

>PRK12653 fructose-6-phosphate aldolase; Reviewed

Probab=96.83  E-value=0.00095  Score=49.95  Aligned_cols=31  Identities=35%  Similarity=0.442  Sum_probs=26.0

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhhhC
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQAAT   66 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~   66 (85)
                      +-.||.|++.|+++.+    .++||||||+.++..
T Consensus         3 ~flDtA~~~~i~~~~~~~~i~GvTTNPsll~k~g~   37 (220)
T PRK12653          3 LYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKK   37 (220)
T ss_pred             EEEecCCHHHHHHHHhCCCccEEeCCHHHHHhcCC
Confidence            3469999999988876    679999999998744

>PRK12655 fructose-6-phosphate aldolase; Reviewed

Probab=96.76  E-value=0.0011  Score=49.66  Aligned_cols=31  Identities=26%  Similarity=0.422  Sum_probs=25.7

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhhhC
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQAAT   66 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~   66 (85)
                      +-.||.|++.|+++.+    .++||||||+.++..
T Consensus         3 ~flDtA~~~~i~~~~~~~~i~GvTTNPsll~k~g~   37 (220)
T PRK12655          3 LYLDTANVAEVERLARIFPIAGVTTNPSIIAASKE   37 (220)
T ss_pred             EEEecCCHHHHHHHHhCCCccEEeCCHHHHHhcCC
Confidence            3469999999987765    689999999998754

>PF00923 Transaldolase: Transaldolase; InterPro: IPR001585 Transaldolase (2

Probab=96.16  E-value=0.00065  Score=51.68  Aligned_cols=64  Identities=23%  Similarity=0.282  Sum_probs=53.9

Q ss_pred             hhHHHhHchhhhhcC--CCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           2 DKLVILFGTEILNII--PGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         2 dk~~v~~g~~~l~~v--~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      |++.|+.|.++++++  +|+||.|++++...+...+|.   ...+..+.|.     ++..+|+.++++++.+..
T Consensus        59 ~~l~~~~~~~~~~~lg~~G~vsvqv~p~~~~d~e~~i~---~A~~l~~~~~-----r~~v~IKIPaT~~Gi~A~  124 (287)
T PF00923_consen   59 DKLAVEDGREALDLLGKDGPVSVQVDPRLAYDAEEMIE---EARRLHALFE-----RPNVVIKIPATEEGIKAI  124 (287)
T ss_dssp             HHHHHHHHHHHHCCHTSSSEEEEE-SGGGTTSHHHHHH---HHHHHHHHHH-----GGTEEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEecCCccccCHHHHHH---HHHHHHHhcc-----ccCeeEECCCCHHHHHHH
Confidence            789999999999999  999999999988888877776   5666777776     788899999999988753

2.1.2 from EC) catalyses the reversible transfer of a three-carbon ketol unit from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate to form erythrose 4-phosphate and fructose 6-phosphate. This enzyme, together with transketolase, provides a link between the glycolytic and pentose-phosphate pathways. Transaldolase is an enzyme of about 34 kDa whose sequence has been well conserved throughout evolution. A lysine has been implicated [] in the catalytic mechanism of the enzyme; it acts as a nucleophilic group that attacks the carbonyl group of fructose-6-phosphate.; GO: 0005975 carbohydrate metabolic process; PDB: 3R5E_A 1F05_A 1I2P_A 1UCW_A 1ONR_A 1I2O_B 3KOF_A 3CWN_B 1I2N_A 1I2Q_A ....

>PRK03343 transaldolase; Validated

Probab=95.80  E-value=0.0045  Score=49.81  Aligned_cols=78  Identities=21%  Similarity=0.237  Sum_probs=50.3

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeee-------------------eccccHHHHHhhCCCCCCCChHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVV-------------------ADTGDFEAMKKYKPTDATTNPSLI   61 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~Vv-------------------ADTgd~~~I~~y~p~DaTTNPSLI   61 (85)
                      +|.+.+.|  +.++.++|+||+|++++.+.+...+|-                   +--..+.+|+.....++.+|-.||
T Consensus        89 aD~L~p~~--e~~~g~~G~VS~EVdp~la~d~e~~i~eA~~L~~~~~~~nv~IKIPaT~~Gi~Ai~~L~~~GI~vn~Tli  166 (368)
T PRK03343         89 CDVLRPVY--EATGGVDGRVSIEVSPRLAHDTEATIAEARRLWAAVDRPNLMIKIPATPEGLPAIEALIAEGISVNVTLI  166 (368)
T ss_pred             HHHHHHHH--HHhCCCCCeEEEEeccccccCHHHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHHHCCCceeEeee
Confidence            47888888  899999999999998765555443332                   222346666666666666666666


Q ss_pred             HhhhCchHHHHHHHHHHHh
Q psy6604          62 LQAATMPQYQHLINKAVEF   80 (85)
Q Consensus        62 l~Aa~~~~y~~li~~a~~~   80 (85)
                      ..+.|-..-.+.+.+.++.
T Consensus       167 FS~~Qa~a~~eA~~~Gl~~  185 (368)
T PRK03343        167 FSVERYRAVADAYLRGLEK  185 (368)
T ss_pred             cCHHHHHHHHHHHHHHHHH
Confidence            6665554444444444433

>cd00439 Transaldolase Transaldolase

Probab=95.71  E-value=0.0025  Score=48.33  Aligned_cols=64  Identities=22%  Similarity=0.057  Sum_probs=45.8

Q ss_pred             hhHHHhHchhhhhcC--CCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           2 DKLVILFGTEILNII--PGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         2 dk~~v~~g~~~l~~v--~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|.+++++.++++.+  +|+||.|++++...+...+|.   -..++.+.+..     +..+|+.+++|++++..
T Consensus        67 ~~~~~~~~~~i~~~~~~~G~Vs~ev~~~~~~d~~~mi~---~A~~l~~~~~~-----~nv~IKIPaT~~Gl~A~  132 (252)
T cd00439          67 IQDACKLFEPIYDQTEADGRVSVEVSARLADDTQGMVE---AAKYLSKVVNR-----RNIYIKIPATAEGIPAI  132 (252)
T ss_pred             HHHHHHHHHHHHHhhCCCCeEEEEEeccccCCHHHHHH---HHHHHHHhcCc-----ccEEEEeCCCHHHHHHH
Confidence            568899999999999  999999999877776666654   23333333322     33777888888777654

Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.

>TIGR00876 tal_mycobact transaldolase, mycobacterial type

Probab=95.68  E-value=0.0048  Score=49.52  Aligned_cols=79  Identities=23%  Similarity=0.237  Sum_probs=52.1

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeee-------------------eccccHHHHHhhCCCCCCCChHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVV-------------------ADTGDFEAMKKYKPTDATTNPSLI   61 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~Vv-------------------ADTgd~~~I~~y~p~DaTTNPSLI   61 (85)
                      +|.+.+.|  +.++.++|+||+|++++.+.+...+|.                   +--..+++|+.....++.+|-.||
T Consensus        79 ~D~L~p~~--e~~~g~~G~VS~EVdP~la~d~e~~i~eA~~L~~~~~~~nv~IKIPaT~~Gi~Ai~~L~~~GI~vNvTli  156 (350)
T TIGR00876        79 CDALMPLW--EDSDGNDGRISIEIDPFLADDAAKSIDEAIELFKILDRPNLFIKIPASEAGIEAISALLAAGIPVNVTLI  156 (350)
T ss_pred             HHHHHHHH--HHhCCCCCcEEEEEccccccCHHHHHHHHHHHHHhhCCCCEEEEeCCCHHHHHHHHHHHHCCCceeEEEe
Confidence            47888888  799999999999998755544333221                   333446777777777777777777


Q ss_pred             HhhhCchHHHHHHHHHHHhh
Q psy6604          62 LQAATMPQYQHLINKAVEFG   81 (85)
Q Consensus        62 l~Aa~~~~y~~li~~a~~~~   81 (85)
                      ..+.|-.+-.+.+.+.++.+
T Consensus       157 FS~~q~~~v~eA~~~Gl~~~  176 (350)
T TIGR00876       157 FSPKIAGEIADALAKEAEKA  176 (350)
T ss_pred             ecHHHHHHHHHHHHHHHHHH
Confidence            77765544444444444433

This model describes one of three related but easily separable famiiles of known and putative transaldolases. This family and the family typified by E. coli TalA and TalB both contain experimentally verified examples.

>cd00955 Transaldolase_like Transaldolase-like proteins from plants and bacteria

Probab=95.06  E-value=0.0096  Score=47.45  Aligned_cols=35  Identities=23%  Similarity=0.152  Sum_probs=28.3

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeee
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVV   37 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~Vv   37 (85)
                      +|++.++|+  +++.++|+||+|+|++.+.+...+|.
T Consensus        76 ~d~l~p~~~--~~~g~~G~Vs~EVdP~la~d~~~~i~  110 (338)
T cd00955          76 CDLLAPVYE--QTGGNDGYVSLEVSPRLADDTQGTIA  110 (338)
T ss_pred             HHHHHHHHh--hcCCCCCeEEEEecccccCCHHHHHH
Confidence            478899996  78999999999999877766655543

Transaldolase is found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	85
2e1d_A	331	Crystal Structure Of Mouse Transaldolase Length = 3		3e-16
1f05_A	337	Crystal Structure Of Human Transaldolase Length = 3		3e-16
2cwn_A	332	Crystal Structure Of Mouse Transaldolase Length = 3		3e-16
3cwn_A	337	Escherichia Coli Transaldolase B Mutant F178y Lengt		2e-15
3kof_A	337	Crystal Structure Of The Double Mutant F178yR181E O		2e-15
1i2q_A	316	Crystal Structure Of Escherichia Coli Transaldolase		4e-15
1ucw_A	317	Complex Of Transaldolase With The Reduced Schiff-Ba		4e-15
1i2o_A	316	Crystal Structure Of Escherichia Coli Transaldolase		5e-15
1i2r_A	316	Crystal Structure Of Escherichia Coli Transaldolase		5e-15
1onr_A	316	Structure Of Transaldolase B Length = 316		5e-15
1i2n_A	316	Crystal Structure Of Escherichia Coli Transaldolase		4e-14
1i2p_A	316	Crystal Structure Of Escherichia Coli Transaldolase		4e-14
3m16_A	329	Structure Of A Transaldolase From Oleispira Antarct		5e-14
3cq0_A	339	Crystal Structure Of Tal2_yeast Length = 339		2e-13
3tk7_A	345	2.0 Angstrom Resolution Crystal Structure Of Transa		3e-12
3te9_A	345	1.8 Angstrom Resolution Crystal Structure Of K135m		3e-12
3hjz_A	334	The Structure Of An Aldolase From Prochlorococcus M		4e-12
3igx_A	324	1.85 Angstrom Resolution Crystal Structure Of Trans		5e-12

>pdb|2E1D|A Chain A, Crystal Structure Of Mouse Transaldolase Length = 331

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +GK+ G
Sbjct: 14 QLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGKKLG 70

>pdb|1F05|A Chain A, Crystal Structure Of Human Transaldolase Length = 337

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Query: 19 RVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAV 78
          R+ + +D   +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+
Sbjct: 10 RMESALD---QLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAI 66
Query: 79 EFGKQNG 85
           +G++ G
Sbjct: 67 AYGRKLG 73

>pdb|2CWN|A Chain A, Crystal Structure Of Mouse Transaldolase Length = 332

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          +LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +GK+ G
Sbjct: 12 QLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGKKLG 68

>pdb|3CWN|A Chain A, Escherichia Coli Transaldolase B Mutant F178y Length = 337

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 15 IIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLI 74
          ++P R S   D    L+ YT VVADTGD  AMK Y+P DATTNPSLIL AA +P+Y+ LI
Sbjct: 14 LVP-RGSHMTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLI 72
Query: 75 NKAVEFGKQN 84
          + AV + KQ 
Sbjct: 73 DDAVAWAKQQ 82

>pdb|3KOF|A Chain A, Crystal Structure Of The Double Mutant F178yR181E OF E.COLI Transaldolase B Length = 337

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 15 IIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLI 74
          ++P R S   D    L+ YT VVADTGD  AMK Y+P DATTNPSLIL AA +P+Y+ LI
Sbjct: 14 LVP-RGSHMTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLI 72
Query: 75 NKAVEFGKQN 84
          + AV + KQ 
Sbjct: 73 DDAVAWAKQQ 82

>pdb|1I2Q|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant T156a Length = 316

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 42/55 (76%)
Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN 84
          L+ YT VVADTGD  AMK Y+P DATTNPSLIL AA +P+Y+ LI+ AV + KQ 
Sbjct: 7  LRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQ 61

>pdb|1UCW|A Chain A, Complex Of Transaldolase With The Reduced Schiff-Base Intermediate Length = 317

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 42/55 (76%)
Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN 84
          L+ YT VVADTGD  AMK Y+P DATTNPSLIL AA +P+Y+ LI+ AV + KQ 
Sbjct: 8  LRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQ 62

>pdb|1I2O|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant E96a Length = 316

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 42/55 (76%)
Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN 84
          L+ YT VVADTGD  AMK Y+P DATTNPSLIL AA +P+Y+ LI+ AV + KQ 
Sbjct: 7  LRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQ 61

>pdb|1I2R|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant S176a Length = 316

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 42/55 (76%)
Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN 84
          L+ YT VVADTGD  AMK Y+P DATTNPSLIL AA +P+Y+ LI+ AV + KQ 
Sbjct: 7  LRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQ 61

>pdb|1ONR|A Chain A, Structure Of Transaldolase B Length = 316

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 42/55 (76%)
Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN 84
          L+ YT VVADTGD  AMK Y+P DATTNPSLIL AA +P+Y+ LI+ AV + KQ 
Sbjct: 7  LRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQ 61

>pdb|1I2N|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant N35a Length = 316

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN 84
          L+ YT VVADTGD  AMK Y+P DATT PSLIL AA +P+Y+ LI+ AV + KQ 
Sbjct: 7  LRQYTTVVADTGDIAAMKLYQPQDATTAPSLILNAAQIPEYRKLIDDAVAWAKQQ 61

>pdb|1I2P|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant D17a Length = 316

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN 84
          L+ YT VVA TGD  AMK Y+P DATTNPSLIL AA +P+Y+ LI+ AV + KQ 
Sbjct: 7  LRQYTTVVAATGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQ 61

>pdb|3M16|A Chain A, Structure Of A Transaldolase From Oleispira Antarctica Length = 329

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQ 83
          LK  T VVADTGD EA+K++KP DATTNPSLIL+AA +  YQHLI +A+++  Q
Sbjct: 13 LKAXTTVVADTGDIEAIKQFKPVDATTNPSLILKAAKLANYQHLIEEAIDWALQ 66

>pdb|3CQ0|A Chain A, Crystal Structure Of Tal2_yeast Length = 339

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 34 TVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          T VVAD+GDFEA+ KY+P D+TTNPSLIL A+ + +Y   I+ AVE+G+++G
Sbjct: 24 THVVADSGDFEAISKYEPQDSTTNPSLILAASKLEKYARFIDAAVEYGRKHG 75

>pdb|3TK7|A Chain A, 2.0 Angstrom Resolution Crystal Structure Of Transaldolase B (Tala) From Francisella Tularensis In Covalent Complex With Fructose 6- Phosphate Length = 345

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          +LK  T+VVADTGDFE +KKYKP DATTNPSLIL+A    +Y +L+ + +   K N 
Sbjct: 32 QLKQVTMVVADTGDFELIKKYKPVDATTNPSLILKAVKEQKYSNLVAETISKVKANN 88

>pdb|3TE9|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of K135m Mutant Of Transaldolase B (Tala) From Francisella Tularensis In Complex With Fructose 6-Phosphate Length = 345

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          +LK  T+VVADTGDFE +KKYKP DATTNPSLIL+A    +Y +L+ + +   K N 
Sbjct: 32 QLKQVTMVVADTGDFELIKKYKPVDATTNPSLILKAVKEQKYSNLVAETISKVKANN 88

>pdb|3HJZ|A Chain A, The Structure Of An Aldolase From Prochlorococcus Marinus Length = 334

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVE 79
          +L   TVVVADTGD +++KK++P DATTNPSLIL AA  P Y  LI+KA+E
Sbjct: 8  QLSSXTVVVADTGDLDSIKKFQPRDATTNPSLILAAAKNPDYVKLIDKAIE 58

>pdb|3IGX|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Transaldolase B (Tala) From Francisella Tularensis. Length = 324

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 29 KLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          +LK  T VVADTGDFE +KKYKP DATTNPSLIL+A    +Y +L+ + +   K N 
Sbjct: 11 QLKQVTXVVADTGDFELIKKYKPVDATTNPSLILKAVKEQKYSNLVAETISKVKANN 67

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	85
3tkf_A	345	Transaldolase; structural genomics, center for str	6e-27
3tkf_A	345	Transaldolase; structural genomics, center for str	6e-04
3hjz_A	334	Transaldolase B; parachlorococcus, marine, cyanoba	9e-27
3hjz_A	334	Transaldolase B; parachlorococcus, marine, cyanoba	7e-04
3cwn_A	337	Transaldolase B; directed evolution, cytoplasm, pe	2e-26
3cq0_A	339	Putative transaldolase YGR043C; alpha/beta barrel,	1e-25
3cq0_A	339	Putative transaldolase YGR043C; alpha/beta barrel,	2e-04
2e1d_A	331	Transaldolase; pentose phosphate pathway, structur	1e-25
2e1d_A	331	Transaldolase; pentose phosphate pathway, structur	4e-04
3m16_A	329	Transaldolase; dimer, molecular replac swiss-model	6e-25
3m16_A	329	Transaldolase; dimer, molecular replac swiss-model	1e-04
3clm_A	352	Transaldolase; YP_208650.1, structural genomics, j	3e-18
3r5e_A	360	Transaldolase; pentose phosphate pathway, TIM barr	9e-14
3r5e_A	360	Transaldolase; pentose phosphate pathway, TIM barr	7e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	4e-04

>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A Length = 345

 Score = 99.3 bits (247), Expect = 6e-27
 Identities = 32/56 (57%), Positives = 40/56 (71%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          LK  T+VVADTGDFE +KKYKP DATTNPSLIL+A    +Y +L+ + +   K N 
Sbjct: 33 LKQVTMVVADTGDFELIKKYKPVDATTNPSLILKAVKEQKYSNLVAETISKVKANN 88

>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A Length = 345

 Score = 35.7 bits (82), Expect = 6e-04
 Identities = 12/28 (42%), Positives = 22/28 (78%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDASL 28
             ++++ FG +IL++I G+VS+EVDA +
Sbjct: 101 AIEILVSFGIKILDVIEGKVSSEVDARV 128

>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str} Length = 334

 Score = 98.5 bits (245), Expect = 9e-27
 Identities = 32/56 (57%), Positives = 40/56 (71%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          L   TVVVADTGD +++KK++P DATTNPSLIL AA  P Y  LI+KA+E  +   
Sbjct: 9  LSSMTVVVADTGDLDSIKKFQPRDATTNPSLILAAAKNPDYVKLIDKAIESSENTL 64

>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str} Length = 334

 Score = 35.7 bits (82), Expect = 7e-04
 Identities = 18/28 (64%), Positives = 22/28 (78%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDASL 28
           +D++ + FG EIL II GRVSTEVDA L
Sbjct: 78  VDQVSVFFGKEILKIISGRVSTEVDARL 105

>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A Length = 337

 Score = 97.7 bits (243), Expect = 2e-26
 Identities = 35/56 (62%), Positives = 42/56 (75%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          L+ YT VVADTGD  AMK Y+P DATTNPSLIL AA +P+Y+ LI+ AV + KQ  
Sbjct: 28 LRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQS 83

>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae} Length = 339

 Score = 95.4 bits (237), Expect = 1e-25
 Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 3/72 (4%)

Query: 17 PGRVSTEVDASL--KLKDY-TVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL 73
          P     +V  S   +LK   T VVAD+GDFEA+ KY+P D+TTNPSLIL A+ + +Y   
Sbjct: 4  PSEKKQKVATSSLEQLKKAGTHVVADSGDFEAISKYEPQDSTTNPSLILAASKLEKYARF 63

Query: 74 INKAVEFGKQNG 85
          I+ AVE+G+++G
Sbjct: 64 IDAAVEYGRKHG 75

>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae} Length = 339

 Score = 37.2 bits (86), Expect = 2e-04
 Identities = 19/28 (67%), Positives = 25/28 (89%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDASL 28
           MDK+++ FGT+IL ++PGRVSTEVDA L
Sbjct: 86  MDKILVEFGTQILKVVPGRVSTEVDARL 113

>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A Length = 331

 Score = 95.4 bits (237), Expect = 1e-25
 Identities = 36/56 (64%), Positives = 44/56 (78%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +GK+ G
Sbjct: 15 LKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGKKLG 70

>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A Length = 331

 Score = 36.1 bits (83), Expect = 4e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDASL 28
           +DKL +LFG EIL  IPGRVSTEVDA L
Sbjct: 81  IDKLFVLFGAEILKKIPGRVSTEVDARL 108

>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} Length = 329

 Score = 93.5 bits (232), Expect = 6e-25
 Identities = 34/56 (60%), Positives = 43/56 (76%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          LK  T VVADTGD EA+K++KP DATTNPSLIL+AA +  YQHLI +A+++  Q  
Sbjct: 13 LKAMTTVVADTGDIEAIKQFKPVDATTNPSLILKAAKLANYQHLIEEAIDWALQIK 68

>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} Length = 329

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDASL 28
            DKL +  G E+L  IPG +STEVDA L
Sbjct: 82  GDKLAVNIGCEVLTSIPGVISTEVDARL 109

>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae} Length = 352

 Score = 76.0 bits (187), Expect = 3e-18
 Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 1/60 (1%)

Query: 27 SLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQ-YQHLINKAVEFGKQNG 85
           + L + +  +  +G+   M K      T+NP++  +A      Y   +           
Sbjct: 14 QIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEVAALKRQNLSPK 73

>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum} Length = 360

 Score = 63.3 bits (154), Expect = 9e-14
 Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 27 SLKLKDYTVVVADTGDF-EAMKKYKPTDATTNPSLILQAATMPQ-YQHLINKAVEFGKQN 84
          S  L D +     +G+  + +++      TTNP++   A +    Y   I +    G   
Sbjct: 13 STWLDDLSRERITSGNLSQVIEEKSVVGVTTNPAIFAAAMSKGDSYDAQIAELKAAGASV 72

Query: 85 G 85
           
Sbjct: 73 D 73

>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum} Length = 360

 Score = 35.6 bits (82), Expect = 7e-04
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query: 11  EILNIIPGRVSTEVDASL 28
           E  N   GRVS EVD  +
Sbjct: 96  ESSNGYDGRVSIEVDPRI 113

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 35.7 bits (81), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 5/26 (19%)

Query: 43 FEA-MKKYKPTDATTNPSLILQAATM 67
           +A +K Y    A   P+L ++ ATM
Sbjct: 25 LQASLKLYADDSA---PALAIK-ATM 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	85
3m16_A	329	Transaldolase; dimer, molecular replac swiss-model	99.82
3hjz_A	334	Transaldolase B; parachlorococcus, marine, cyanoba	99.82
3tkf_A	345	Transaldolase; structural genomics, center for str	99.79
3cwn_A	337	Transaldolase B; directed evolution, cytoplasm, pe	99.67
2e1d_A	331	Transaldolase; pentose phosphate pathway, structur	99.64
3cq0_A	339	Putative transaldolase YGR043C; alpha/beta barrel,	99.63
3r5e_A	360	Transaldolase; pentose phosphate pathway, TIM barr	99.41
3cq0_A	339	Putative transaldolase YGR043C; alpha/beta barrel,	98.92
2e1d_A	331	Transaldolase; pentose phosphate pathway, structur	98.91
3cwn_A	337	Transaldolase B; directed evolution, cytoplasm, pe	98.9
3m16_A	329	Transaldolase; dimer, molecular replac swiss-model	98.81
3hjz_A	334	Transaldolase B; parachlorococcus, marine, cyanoba	98.8
3clm_A	352	Transaldolase; YP_208650.1, structural genomics, j	98.79
3tkf_A	345	Transaldolase; structural genomics, center for str	98.79
1l6w_A	220	Fructose-6-phosphate aldolase 1; alpha-beta barrel	98.13
1wx0_A	223	Transaldolase; structural genomics, riken structur	98.1
3clm_A	352	Transaldolase; YP_208650.1, structural genomics, j	97.49
3r5e_A	360	Transaldolase; pentose phosphate pathway, TIM barr	97.31
3s1x_A	223	Probable transaldolase; alpha-beta barrel, conform	97.07
1vpx_A	230	Protein (transaldolase (EC 2.2.1.2)); TM0295, stru	97.0
3r8r_A	212	Transaldolase; pentose phosphate pathway, schiff b	96.84
1wx0_A	223	Transaldolase; structural genomics, riken structur	96.72
3s1x_A	223	Probable transaldolase; alpha-beta barrel, conform	94.4
3r8r_A	212	Transaldolase; pentose phosphate pathway, schiff b	94.0
1l6w_A	220	Fructose-6-phosphate aldolase 1; alpha-beta barrel	93.48
1vpx_A	230	Protein (transaldolase (EC 2.2.1.2)); TM0295, stru	93.25

>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1

Probab=99.82  E-value=4.9e-21  Score=148.66  Aligned_cols=63  Identities=54%  Similarity=0.795  Sum_probs=60.2

Q ss_pred             ccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhh
Q psy6604          21 STEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQ   83 (85)
Q Consensus        21 sTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~   83 (85)
                      -|-||+|+|||++|+||+||||++.|++|+|+|+|||||||++|++.|.|+++|+++++|+++
T Consensus         4 ~~~~~~L~~Lk~~t~vv~Dtgd~~~i~~~~p~daTTNPsi~~~A~~~~~Y~~li~~~~~~~~~   66 (329)
T 3m16_A            4 AQAKNKLEALKAMTTVVADTGDIEAIKQFKPVDATTNPSLILKAAKLANYQHLIEEAIDWALQ   66 (329)
T ss_dssp             C-CCCHHHHHTTTSEEEEECSCHHHHHHHCCSEEECCHHHHHHHHTCGGGHHHHHHHHHHHHH
T ss_pred             ccccCHHHHHhcCcEEeeCCCCHHHHHhcCCCccCCCHHHHHHHhcCHhHHHHHHHHHHHhhh
Confidence            467899999999999999999999999999999999999999999999999999999999987

>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}

Probab=99.82  E-value=3.8e-21  Score=149.56  Aligned_cols=62  Identities=52%  Similarity=0.739  Sum_probs=59.3

Q ss_pred             ccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhc
Q psy6604          23 EVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN   84 (85)
Q Consensus        23 em~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~   84 (85)
                      ++++|+|||++|+||+||||+++|++|+|+|+|||||||++|+++|.|+++|+++++|+++.
T Consensus         2 m~~~L~~Lk~~t~vv~Dtgd~~~i~~~~p~daTTNPsi~~~A~~~~~Y~~li~~~~~~~~~~   63 (334)
T 3hjz_A            2 MKSILEQLSSMTVVVADTGDLDSIKKFQPRDATTNPSLILAAAKNPDYVKLIDKAIESSENT   63 (334)
T ss_dssp             CCCHHHHHHTTSEEEECCCSHHHHHHHCCSSEEECHHHHHHHTTSTTTHHHHHHHHHHHHHH
T ss_pred             CccHHHHHhhCeEEecCCCCHHHHHhcCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHhhhc
Confidence            35789999999999999999999999999999999999999999999999999999999864

>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A

Probab=99.79  E-value=2.4e-20  Score=145.65  Aligned_cols=77  Identities=47%  Similarity=0.649  Sum_probs=58.6

Q ss_pred             HhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhc
Q psy6604           6 ILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN   84 (85)
Q Consensus         6 v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~   84 (85)
                      |..|++.+-.-.+-.  .|++|+|||++|+|||||||++.|++|+|+|+|||||||++|++.|.|+++|+++++|+++.
T Consensus        11 ~~~~~~~~~~~~~~m--~~~~Ld~Lk~~t~vv~Dtgdl~~i~~~~p~daTTNPsi~~~A~~~~~Y~~li~~~~~~~~~~   87 (345)
T 3tkf_A           11 VDLGTENLYFQSNAM--QKSVLEQLKQVTMVVADTGDFELIKKYKPVDATTNPSLILKAVKEQKYSNLVAETISKVKAN   87 (345)
T ss_dssp             -----------------CCCHHHHHHHHSEEEEECSCHHHHGGGCCSEEECCHHHHHHHHHTCTTHHHHHHHHHHHHHH
T ss_pred             cccCcchhhhhccCC--ChhHHHHhhcCcEEecCCCCHHHHHhcCCCccccCHHHHHHHhcCHhHHHHHHHHHHHhhhc
Confidence            455665554433332  12689999999999999999999999999999999999999999999999999999999864

>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A

Probab=99.67  E-value=2.2e-17  Score=127.97  Aligned_cols=68  Identities=56%  Similarity=0.806  Sum_probs=59.2

Q ss_pred             CccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhcC
Q psy6604          18 GRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG   85 (85)
Q Consensus        18 GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~~   85 (85)
                      ++++-+||+|++|++++++++||||++.|++|.|.|+|||||||++|.+.+.|+++|+++++|+++.|
T Consensus        16 ~~~~~m~~~L~~L~~~~~~~~DT~dl~~i~~~~~~GvTTNPsLi~ka~~~~~y~~~i~~~~~~~~~~~   83 (337)
T 3cwn_A           16 PRGSHMTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQS   83 (337)
T ss_dssp             ------CBHHHHHTTTSEEEEECSCHHHHHHHCCSEEECCHHHHHHHHTSGGGHHHHHHHHHHHHHHC
T ss_pred             chhhhhCcHHHHHHhCCEEEccCCCHHHHHHhCCCCeecCHHHHHHhcCCchHHHHHHHHHHHHHhcC
Confidence            45555679999999999999999999999999999999999999999988999999999999988653

>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A

Probab=99.64  E-value=5.2e-17  Score=125.55  Aligned_cols=64  Identities=58%  Similarity=0.920  Sum_probs=58.3

Q ss_pred             ccc-ccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhcC
Q psy6604          22 TEV-DASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG   85 (85)
Q Consensus        22 Tem-~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~~   85 (85)
                      +-| |+|++|+++|++++||||++.|++|.|+|+|||||||++|.+.+.|+++|+++++|+++++
T Consensus         6 ~~m~~~L~~L~~~t~~~~Dt~dl~~i~~~~~~GvTTNPsli~ka~~~~~y~~~i~~~~~~~~~~~   70 (331)
T 2e1d_A            6 SGMESALDQLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGKKLG   70 (331)
T ss_dssp             ---CCHHHHHTTTSEEEEECSCGGGTTTTCCSEEECCHHHHHHHHTSGGGHHHHHHHHHHHHHHC
T ss_pred             hhhhHHHHHHHHcCEEEecCcCHHHHHhhCCCCeecCHHHHHHHcCCchHHHHHHHHHHHHhhcC
Confidence            345 8899999999999999999999999999999999999999999999999999999988753

>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae}

Probab=99.63  E-value=6.5e-17  Score=125.44  Aligned_cols=63  Identities=51%  Similarity=0.831  Sum_probs=58.8

Q ss_pred             cc-ccccccccc-eeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhcC
Q psy6604          23 EV-DASLKLKDY-TVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG   85 (85)
Q Consensus        23 em-~~L~~Lk~~-T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~~   85 (85)
                      .| |+|++|+++ |.|++||||++.|++|.|+|+|||||||++|.+.+.|+++|+++++|++++|
T Consensus        11 ~m~~~L~~L~~~gt~i~lDT~dl~~i~~~~~~GvTTNPsLi~ka~~~~~y~~~i~~~~~~~~~~~   75 (339)
T 3cq0_A           11 VATSSLEQLKKAGTHVVADSGDFEAISKYEPQDSTTNPSLILAASKLEKYARFIDAAVEYGRKHG   75 (339)
T ss_dssp             -CCCHHHHHHHTTCEEEEECSCGGGTGGGCCSEEECCHHHHHHHHTCGGGHHHHHHHHHHHHHHC
T ss_pred             hhhhHHHHHHHcCCEEEecCCCHHHHHhhCCCCeecCHHHHHHHhCChhHHHHHHHHHHHHhhcC
Confidence            35 789999999 9999999999999999999999999999999999999999999999987653

>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum}

Probab=99.41  E-value=4.9e-14  Score=110.84  Aligned_cols=60  Identities=20%  Similarity=0.272  Sum_probs=55.9

Q ss_pred             cccccccccc-eeeeec--------cccHH-HHHhhCCCCCCCChHHHHhh-hCchHHHHHHHHHHHhhhh
Q psy6604          24 VDASLKLKDY-TVVVAD--------TGDFE-AMKKYKPTDATTNPSLILQA-ATMPQYQHLINKAVEFGKQ   83 (85)
Q Consensus        24 m~~L~~Lk~~-T~VvAD--------Tgd~~-~I~~y~p~DaTTNPSLIl~A-a~~~~y~~li~~a~~~~~~   83 (85)
                      ||.|.+|+++ +.|.+|        ||||+ +|++|+|+|+|||||||++| ++.|.|+++|++++++++.
T Consensus         1 m~~l~~L~~~g~siw~D~l~R~~l~sGdl~~~I~~~~~~gaTTNPsi~~kAi~~~~~Y~~~i~~~~~~~~~   71 (360)
T 3r5e_A            1 MSHIDDLAQLGTSTWLDDLSRERITSGNLSQVIEEKSVVGVTTNPAIFAAAMSKGDSYDAQIAELKAAGAS   71 (360)
T ss_dssp             CCHHHHHHHTTEEEEESCCCHHHHHTSHHHHHHHHHCCCEEECCHHHHHHHHHHCSTTHHHHHHHHHTTCC
T ss_pred             CChHHHHHHcCcEEEeeCCcccccccccHHHHHHhCCCCeecCCHHHHHHHHhCCHHHHHHHHHHHHhcCC
Confidence            7889999999 678899        99999 89999999999999999999 6999999999999988764

>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae}

Probab=98.92  E-value=6.1e-11  Score=91.97  Aligned_cols=70  Identities=40%  Similarity=0.571  Sum_probs=66.2

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ...++++.|+..++.+...+|+.|+||+++++.
T Consensus        86 ~D~l~v~~g~ei~~~v~G~VS~EV~prls~D~e~~i~---eA~~L~~l~~~~gi~r~nv~IKIPaT~eGi~A~  155 (339)
T 3cq0_A           86 MDKILVEFGTQILKVVPGRVSTEVDARLSFDKKATVK---KALHIIKLYKDAGVPKERVLIKIASTWEGIQAA  155 (339)
T ss_dssp             HHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHH---HHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCceEEEeeccccCCHHHHHH---HHHHHHHHhHhhCCCCCcEEEEeCCCHHHHHHH
Confidence            4899999999999999999999999999999999998   789999999999999999999999999998864

>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A

Probab=98.91  E-value=6.3e-11  Score=91.53  Aligned_cols=69  Identities=41%  Similarity=0.555  Sum_probs=65.4

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQH   72 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~   72 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ...++++.|+..++.+...+|+.|+||++++.
T Consensus        81 ~D~l~v~~g~ei~~~v~G~VS~EV~prla~d~e~~i~---eA~~L~~l~~~~gi~r~nv~IKIPaT~eGi~A  149 (331)
T 2e1d_A           81 IDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVA---RARRLIELYKEAGVGKDRILIKLSSTWEGIQA  149 (331)
T ss_dssp             HHHHHHHHHHHHHHHCSSCEEEECCGGGTTCHHHHHH---HHHHHHHHHHHTTCCGGGEEEEEECSHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCceEEEeccccCCCHHHHHH---HHHHHHHHhHhhCCCCCcEEEEeCCCHHHHHH
Confidence            4899999999999999999999999999999999998   78999999999999999999999999999876

>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A

Probab=98.90  E-value=8.4e-11  Score=91.11  Aligned_cols=70  Identities=33%  Similarity=0.457  Sum_probs=65.7

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ...++++.|+..++.+...+|+.|+||+++++.
T Consensus        94 ~D~l~v~~g~ei~~~v~G~VS~EVdprla~D~e~~i~---eA~~L~~l~~~~gi~r~nv~IKIPaT~eGi~A~  163 (337)
T 3cwn_A           94 TDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIA---KAKRLIKLYNDAGISNDRILIKLASTWQGIRAA  163 (337)
T ss_dssp             HHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHH---HHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCceEEEecccccCCHHHHHH---HHHHHHHHhhhhCCCCCcEEEEeCCCHHHHHHH
Confidence            4899999999999999999999999999999999998   789999999999999999999999999998753

>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1

Probab=98.81  E-value=2.5e-10  Score=88.63  Aligned_cols=70  Identities=33%  Similarity=0.418  Sum_probs=65.3

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ...++++.|+..++.....+|+.+++|++++..
T Consensus        82 ~D~l~v~~g~ei~~~v~G~VS~EV~~~ls~d~e~~i~---eA~~l~~l~~~~gi~~~nv~IKIP~T~eGl~A~  151 (329)
T 3m16_A           82 GDKLAVNIGCEVLTSIPGVISTEVDARLSFDTQATVA---KARKLIRLYQDAGIDSDRILIKIASTWEGIQAA  151 (329)
T ss_dssp             HHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHH---HHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCcEEEEECCcccCCHHHHHH---HHHHHHHhhhhhCCCCCcEEEEeCCCHHHHHHH
Confidence            5899999999999999999999999999999999988   788999999999999999999999999998754

>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}

Probab=98.80  E-value=3.1e-10  Score=88.25  Aligned_cols=70  Identities=37%  Similarity=0.464  Sum_probs=65.2

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ...++++.|+..++.....+|+.+++|++++..
T Consensus        78 ~D~l~v~~g~ei~~~v~G~VS~EV~~~ls~d~e~~i~---eA~~l~~l~~~~gi~~~nv~IKIP~T~eGl~A~  147 (334)
T 3hjz_A           78 VDQVSVFFGKEILKIISGRVSTEVDARLSFDTEATVK---KARKLINLYKNFGIEKERILIKIAATWEGIKAA  147 (334)
T ss_dssp             HHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHH---HHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEEcCCccCCHHHHHH---HHHHHHHHhhhhCCCCCcEEEEeCCCHHHHHHH
Confidence            5899999999999999999999999999999999988   678999999999999999999999999997754

>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae}

Probab=98.79  E-value=8.8e-10  Score=85.83  Aligned_cols=45  Identities=18%  Similarity=0.251  Sum_probs=40.7

Q ss_pred             eeccccHHHHHhhCCCCCCCChHHHHhhh-CchHHHHHHHHHHHhh
Q psy6604          37 VADTGDFEAMKKYKPTDATTNPSLILQAA-TMPQYQHLINKAVEFG   81 (85)
Q Consensus        37 vADTgd~~~I~~y~p~DaTTNPSLIl~Aa-~~~~y~~li~~a~~~~   81 (85)
                      ..||||++.+..|.|.|+||||||+.+|. +.+.|+++|++.++++
T Consensus        24 ~ldtgdl~~~~~~g~~GvTTNPsl~~kA~~~~~~y~~~i~~~~~~~   69 (352)
T 3clm_A           24 LVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEVAALKRQN   69 (352)
T ss_dssp             HHHTSHHHHHHTTTCCCEECCHHHHHHHHHHCTTHHHHHHHHTTSS
T ss_pred             hccccCHHHHHhcCCCeEecCHHHHHHHHhcCCcHHHHHHHHHHhC
Confidence            68999999999999999999999999997 5589999999987544

>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A

Probab=98.79  E-value=3.5e-10  Score=88.33  Aligned_cols=70  Identities=27%  Similarity=0.422  Sum_probs=65.0

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|+||.++++++|||||+|++++.+.+...+|.   ...++++.|+..++.....+|+.+++|++++..
T Consensus       101 ~D~l~v~~g~ei~~~v~G~VS~EV~~~ls~d~e~~i~---eA~~l~~l~~~~gi~~~nv~IKIP~T~eGi~A~  170 (345)
T 3tkf_A          101 AIEILVSFGIKILDVIEGKVSSEVDARVSFNSATTID---YAKRIIARYESNGIPKDRVLIMIAATWEGIKAA  170 (345)
T ss_dssp             HHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHH---HHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEEcCCccCCHHHHHH---HHHHHHHHhhhcCCCCCcEEEEeCCCHHHHHHH
Confidence            5899999999999999999999999999999999888   678899999999999989999999999998754

>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1

Probab=98.13  E-value=1.3e-06  Score=64.11  Aligned_cols=42  Identities=29%  Similarity=0.346  Sum_probs=34.6

Q ss_pred             eeeccccHHHHHhhCCC----CCCCChHHHHhhhCchHHHHHHHHHHH
Q psy6604          36 VVADTGDFEAMKKYKPT----DATTNPSLILQAATMPQYQHLINKAVE   79 (85)
Q Consensus        36 VvADTgd~~~I~~y~p~----DaTTNPSLIl~Aa~~~~y~~li~~a~~   79 (85)
                      +.+||+|++.|+++.|.    |+||||||+.++.  ..|.+.+.+..+
T Consensus         3 ~~~Dtad~~~i~~~~~~g~i~GvTTNPsii~k~~--~~~~~~i~ei~~   48 (220)
T 1l6w_A            3 LYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGK--KPLDVVLPQLHE   48 (220)
T ss_dssp             EEEECCCHHHHHHHHTTSCCCEEECCHHHHHHHC--SCHHHHHHHHHH
T ss_pred             EEecCCCHHHHHHHHhcCCcCceeeCHHHHHhcC--CCHHHHHHHHHH
Confidence            67899999999999885    8999999999963  347777766543

>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1

Probab=98.10  E-value=8.1e-07  Score=65.24  Aligned_cols=30  Identities=30%  Similarity=0.457  Sum_probs=27.3

Q ss_pred             eeeccccHHHHHhhCCC----CCCCChHHHHhhh
Q psy6604          36 VVADTGDFEAMKKYKPT----DATTNPSLILQAA   65 (85)
Q Consensus        36 VvADTgd~~~I~~y~p~----DaTTNPSLIl~Aa   65 (85)
                      +++||+|++.|++|.|.    |+||||||+.++.
T Consensus         3 ~~~Dtad~~~i~~~~~~g~i~GvTTNPsli~ka~   36 (223)
T 1wx0_A            3 LYLDTASLEEIREIAAWGVLSGVTTNPTLVAKAF   36 (223)
T ss_dssp             EEEECCCHHHHHHHHHHTCCCEEECCHHHHHHHH
T ss_pred             EEEeCCCHHHHHHHHhcCCcCceecCHHHHHhcC
Confidence            67999999999999874    8999999999984

>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae}

Probab=97.49  E-value=8.9e-06  Score=63.27  Aligned_cols=62  Identities=21%  Similarity=0.065  Sum_probs=44.4

Q ss_pred             hhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           2 DKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         2 dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      |.+.+.|  ++++.+|||||+|++++.+.+...+|.   ...++++.     +.....+|+.++||++++..
T Consensus        89 d~l~~~~--e~~~~v~G~VS~EVdprla~D~e~~i~---eA~~L~~~-----i~r~nv~IKIPaT~eGi~A~  150 (352)
T 3clm_A           89 DVCLAEH--ESTGGKTGFVSLEVSPELAKDAQGTVE---EARRLHAA-----IARKNAMIKVPATDAGIDAL  150 (352)
T ss_dssp             HHHHHHH--HHTTSSSCCEEEECCGGGTTCHHHHHH---HHHHHHHH-----HCCTTEEEEEECSHHHHHHH
T ss_pred             HHHHHHH--HhcCCCCeeEEEEeccccCCCHHHHHH---HHHHHHHh-----cCCCCEEEEeCCCHHHHHHH
Confidence            4455555  667889999999999999988888776   45555555     22334677777777776653

>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum}

Probab=97.31  E-value=1.9e-05  Score=62.16  Aligned_cols=35  Identities=31%  Similarity=0.347  Sum_probs=29.4

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeee
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVV   37 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~Vv   37 (85)
                      +|++.|+|  ++++.++|+||+|++++.+.+...+|.
T Consensus        88 ~D~L~~~~--e~~~~~~G~VS~EV~prla~d~e~mi~  122 (360)
T 3r5e_A           88 CDLFTGIF--ESSNGYDGRVSIEVDPRISADRDATLA  122 (360)
T ss_dssp             HHHTHHHH--HHTTTSSSEEEEECCGGGTTCHHHHHH
T ss_pred             HHHHHHHH--HhcCCCCccEEEEecccccCCHHHHHH
Confidence            48899999  899999999999999887776655554

>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*

Probab=97.07  E-value=0.00017  Score=53.32  Aligned_cols=42  Identities=24%  Similarity=0.474  Sum_probs=31.5

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhh---hCchHHHHHHHHHHH
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQA---ATMPQYQHLINKAVE   79 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~A---a~~~~y~~li~~a~~   79 (85)
                      +-.||.|++.|+++.+    .++||||||+.++   ..  .|.+++.+..+
T Consensus         3 ~flDtAn~~ei~~~~~~g~i~GVTTNPsli~k~~~~g~--~~~~~~~ei~~   51 (223)
T 3s1x_A            3 IFLDTANIDEIRTGVNWGIVDGVTTNPTLISKEAVNGK--KYGDIIREILK   51 (223)
T ss_dssp             EEEECCCHHHHHHHHHHTCCCEEECCHHHHHHHSCTTC--CHHHHHHHHHH
T ss_pred             EEEecCCHHHHHHHHhcCCcccccCCHHHHHhhhccCC--CHHHHHHHHHH
Confidence            3469999999998876    5689999999999   53  45556555443

>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1

Probab=97.00  E-value=0.00012  Score=54.04  Aligned_cols=47  Identities=23%  Similarity=0.360  Sum_probs=27.3

Q ss_pred             cccceeeeeccccHHHHHhhC---C-CCCCCChHHHHhhhCchHHHHHHHHHH
Q psy6604          30 LKDYTVVVADTGDFEAMKKYK---P-TDATTNPSLILQAATMPQYQHLINKAV   78 (85)
Q Consensus        30 Lk~~T~VvADTgd~~~I~~y~---p-~DaTTNPSLIl~Aa~~~~y~~li~~a~   78 (85)
                      -..||-+-.||++++.|+++.   + .++||||||+.++.  ..|.+.+.+..
T Consensus         9 ~~~~~~~flDta~~~ei~~~~~~g~i~GvTTNPsi~~k~g--~~~~~~i~ei~   59 (230)
T 1vpx_A            9 HHHHMKIFLDTANLEEIKKGVEWGIVDGVTTNPTLISKEG--AEFKQRVKEIC   59 (230)
T ss_dssp             --CCCEEEEECCCHHHHHHHHHTTCCCEEECCC-------------CHHHHHH
T ss_pred             cccceEEEEcCCCHHHHHHHHhcCCcCCCccCHHHHHhcC--CCHHHHHHHHH
Confidence            345788999999999999875   4 57999999999953  34666666543

>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}

Probab=96.84  E-value=0.00047  Score=50.53  Aligned_cols=41  Identities=20%  Similarity=0.433  Sum_probs=31.2

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhh-hCchHHHHHHHHHH
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQA-ATMPQYQHLINKAV   78 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~A-a~~~~y~~li~~a~   78 (85)
                      +-.||.|++.|+++.+    .++||||||+.++ ..  .|...+.+..
T Consensus         3 ~flDtAn~~ei~~~~~~g~i~GVTTNPsli~k~~g~--~~~~~~~eI~   48 (212)
T 3r8r_A            3 FFVDTANIDEIREANELGILAGVTTNPSLVAKEANV--SFHDRLREIT   48 (212)
T ss_dssp             EEEECCCHHHHHHHHHTTCEEEEECCHHHHHTSCSS--CHHHHHHHHH
T ss_pred             EEEecCCHHHHHHHHhcCCcccccCCHHHHHHccCC--CHHHHHHHHH
Confidence            3469999999999887    5579999999999 43  3555555544

>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1

Probab=96.72  E-value=0.00012  Score=53.61  Aligned_cols=57  Identities=16%  Similarity=0.058  Sum_probs=44.1

Q ss_pred             HHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           4 LVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         4 ~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      -...++.++++++|||||+|++   +.+...+|.   ...++++.|       ...+|+.+++|++++..
T Consensus        47 ~~~~~~~~i~~~v~G~VS~EV~---a~d~e~~i~---eA~~l~~~~-------~nv~IKIP~T~eGl~A~  103 (223)
T 1wx0_A           47 AFAAHLRAICETVGGPVSAEVT---ALEAEAMVA---EGRRLAAIH-------PNIVVKLPTTEEGLKAC  103 (223)
T ss_dssp             HHHHHHHHHHHHHTSCEEEECC---CSSHHHHHH---HHHHHHHHC-------TTEEEEEESSHHHHHHH
T ss_pred             CHHHHHHHHHhccCCcEEEEEe---cCCHHHHHH---HHHHHHhhC-------CCEEEEeCCCHHHHHHH
Confidence            3567899999999999999998   556666665   566667766       24888999999887654

>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*

Probab=94.40  E-value=0.0042  Score=45.79  Aligned_cols=55  Identities=22%  Similarity=0.065  Sum_probs=35.8

Q ss_pred             HHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHH
Q psy6604           5 VILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQH   72 (85)
Q Consensus         5 ~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~   72 (85)
                      +..+..+|+++|||+||+|+++   .+...+|.   -..++.+.+       ...+|+.+++|++++.
T Consensus        42 ~~~~~~ei~~~v~G~Vs~EV~a---~d~e~mi~---eA~~L~~~~-------~nv~IKIP~T~eGl~A   96 (223)
T 3s1x_A           42 YGDIIREILKIVDGPVSVEVVS---TKYEGMVE---EARKIHGLG-------DNAVVKIPMTEDGLRA   96 (223)
T ss_dssp             HHHHHHHHHHHCSSCEEEECCC---CSHHHHHH---HHHHHHHTC-------TTEEEEEESSHHHHHH
T ss_pred             HHHHHHHHHHhCCCCEEEEEcc---CCHHHHHH---HHHHHHHhC-------CCEEEEeCCCHHHHHH
Confidence            4577889999999999999875   33333332   223333333       2467777788777654

>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}

Probab=94.00  E-value=0.0049  Score=45.06  Aligned_cols=55  Identities=22%  Similarity=0.124  Sum_probs=34.2

Q ss_pred             HHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHH
Q psy6604           5 VILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQH   72 (85)
Q Consensus         5 ~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~   72 (85)
                      +..+..+|+++|+|+||+|+   .+.+...+|.   -..++.+.+       ...+|+.+++|++++.
T Consensus        40 ~~~~~~eI~~~v~G~Vs~EV---~a~d~e~mi~---ea~~l~~~~-------~nv~IKIP~T~eGl~A   94 (212)
T 3r8r_A           40 FHDRLREITDVVKGSVSAEV---ISLKAEEMIE---EGKELAKIA-------PNITVKIPMTSDGLKA   94 (212)
T ss_dssp             HHHHHHHHHHHCCSCEEEEC---CCSSHHHHHH---HHHHHHTTC-------TTEEEEEESSHHHHHH
T ss_pred             HHHHHHHHHHhcCCCEEEEE---ecCCHHHHHH---HHHHHHHhC-------CCEEEEeCCCHHHHHH
Confidence            46788999999999999998   2333333332   122222222       2467777777777643

>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1

Probab=93.48  E-value=0.0068  Score=44.27  Aligned_cols=51  Identities=8%  Similarity=0.061  Sum_probs=38.1

Q ss_pred             hhhhhcCCCc--cccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604          10 TEILNIIPGR--VSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus        10 ~~~l~~v~Gr--vsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      .+++++++|+  ||+|++   +.+...+|.   -..++.+.|       ...+|+.+++|++++..
T Consensus        44 ~ei~~~v~G~~~VS~EV~---a~d~e~mi~---eA~~l~~~~-------~nv~IKIP~T~eGl~A~   96 (220)
T 1l6w_A           44 PQLHEAMGGQGRLFAQVM---ATTAEGMVN---DALKLRSII-------ADIVVKVPVTAEGLAAI   96 (220)
T ss_dssp             HHHHHHTTTCSEEEEECC---CSSHHHHHH---HHHHHHHHS-------TTCEEEEECSHHHHHHH
T ss_pred             HHHHHhcCCCceEEEEEc---cCCHHHHHH---HHHHHHHhC-------CCEEEEeCCCHHHHHHH
Confidence            6789999999  999998   555555665   456666666       24888999998887653

>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1

Probab=93.25  E-value=0.0056  Score=45.15  Aligned_cols=51  Identities=24%  Similarity=0.126  Sum_probs=31.5

Q ss_pred             chhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHH
Q psy6604           9 GTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQH   72 (85)
Q Consensus         9 g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~   72 (85)
                      -.+|+++++|+||.|++   +.+...+|.   -..++.+.+       ...+|+.+++|++++.
T Consensus        55 i~ei~~iv~G~VS~EV~---a~d~e~mi~---eA~~L~~~~-------~nv~IKIP~T~eGl~A  105 (230)
T 1vpx_A           55 VKEICDLVKGPVSAEVV---SLDYEGMVR---EARELAQIS-------EYVVIKIPMTPDGIKA  105 (230)
T ss_dssp             HHHHHHHHCSCEEEECS---CCSHHHHHH---HHHHHHTTC-------TTEEEEEESSHHHHHH
T ss_pred             HHHHHhccCCcEEEEEc---cCCHHHHHH---HHHHHHHhC-------CCEEEEeCCCHHHHHH
Confidence            35789999999999997   334444443   233333333       2366677777766554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	85
d1onra_	316	c.1.10.1 (A:) Transaldolase {Escherichia coli [Tax	3e-25
d1onra_	316	c.1.10.1 (A:) Transaldolase {Escherichia coli [Tax	0.004
d2e1da1	319	c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musc	5e-24
d2e1da1	319	c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musc	4e-04
d1wx0a1	211	c.1.10.1 (A:1-211) Decameric fructose-6-phosphate	2e-06
d1l6wa_	220	c.1.10.1 (A:) Decameric fructose-6-phosphate aldol	2e-05
d1vpxa_	218	c.1.10.1 (A:) Decameric fructose-6-phosphate aldol	6e-05

>d1onra_ c.1.10.1 (A:) Transaldolase {Escherichia coli [TaxId: 562]} Length = 316

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Escherichia coli [TaxId: 562]

 Score = 92.9 bits (230), Expect = 3e-25
 Identities = 35/56 (62%), Positives = 42/56 (75%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          L+ YT VVADTGD  AMK Y+P DATTNPSLIL AA +P+Y+ LI+ AV + KQ  
Sbjct: 7  LRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQS 62

>d1onra_ c.1.10.1 (A:) Transaldolase {Escherichia coli [TaxId: 562]} Length = 316

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Escherichia coli [TaxId: 562]

 Score = 32.0 bits (72), Expect = 0.004
 Identities = 17/29 (58%), Positives = 21/29 (72%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDASLK 29
            DKL +  G EIL ++PGR+STEVDA L 
Sbjct: 73  TDKLAVNIGLEILKLVPGRISTEVDARLS 101

>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus) [TaxId: 10090]} Length = 319

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.2 bits (223), Expect = 5e-24
 Identities = 36/56 (64%), Positives = 44/56 (78%)

Query: 30 LKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG 85
          LK +T VVADTGDF A+ +YKP DATTNPSLIL AA MP YQ L+ +A+ +GK+ G
Sbjct: 6  LKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGKKLG 61

>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus) [TaxId: 10090]} Length = 319

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (79), Expect = 4e-04
 Identities = 22/36 (61%), Positives = 25/36 (69%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVV 36
           +DKL +LFG EIL  IPGRVSTEVDA L      +V
Sbjct: 72  IDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMV 107

>d1wx0a1 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate aldolase/transaldolase {Thermus thermophilus [TaxId: 274]} Length = 211

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Decameric fructose-6-phosphate aldolase/transaldolase
species: Thermus thermophilus [TaxId: 274]

 Score = 41.3 bits (96), Expect = 2e-06
 Identities = 9/50 (18%), Positives = 16/50 (32%), Gaps = 4/50 (8%)

Query: 38 ADTGDFEAMKKYKPT----DATTNPSLILQAATMPQYQHLINKAVEFGKQ 83
           DT   E +++          TTNP+L+ +A                 + 
Sbjct: 5  LDTASLEEIREIAAWGVLSGVTTNPTLVAKAFAAKGEALTEEAFAAHLRA 54

>d1l6wa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Escherichia coli [TaxId: 562]} Length = 220

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Decameric fructose-6-phosphate aldolase/transaldolase
species: Escherichia coli [TaxId: 562]

 Score = 38.6 bits (89), Expect = 2e-05
 Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 5/50 (10%)

Query: 38 ADTGDFEAMKKYKPT----DATTNPSLILQAATMPQYQHLINKAVEFGKQ 83
           DT D  A+K           TTNPS+I  A   P    L       G Q
Sbjct: 5  LDTSDVVAVKALSRIFPLAGVTTNPSIIA-AGKKPLDVVLPQLHEAMGGQ 53

>d1vpxa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]} Length = 218

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Decameric fructose-6-phosphate aldolase/transaldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.4 bits (86), Expect = 6e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%)

Query: 38 ADTGDFEAMKKYKPT----DATTNPSLILQAA 65
           DT + E +KK          TTNP+LI +  
Sbjct: 7  LDTANLEEIKKGVEWGIVDGVTTNPTLISKEG 38

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	85
d1onra_	316	Transaldolase {Escherichia coli [TaxId: 562]}	99.83
d2e1da1	319	Transaldolase {Mouse (Mus musculus) [TaxId: 10090]	99.78
d1onra_	316	Transaldolase {Escherichia coli [TaxId: 562]}	98.77
d2e1da1	319	Transaldolase {Mouse (Mus musculus) [TaxId: 10090]	98.53
d1wx0a1	211	Decameric fructose-6-phosphate aldolase/transaldol	97.44
d1vpxa_	218	Decameric fructose-6-phosphate aldolase/transaldol	97.21
d1l6wa_	220	Decameric fructose-6-phosphate aldolase/transaldol	97.2

>d1onra_ c.1.10.1 (A:) Transaldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1e-21  Score=149.00  Aligned_cols=61  Identities=59%  Similarity=0.900  Sum_probs=58.5

Q ss_pred             ccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhcC
Q psy6604          25 DASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQNG   85 (85)
Q Consensus        25 ~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~~   85 (85)
                      |+|++||++|+|||||||++.|++|.|+|+|||||||++|.+.|.|++||+++++|+++++
T Consensus         2 ~~l~~l~~~t~vv~DT~d~~~I~~~~p~~~TTNPSLi~ka~~~~~y~~li~~~i~~~~~~~   62 (316)
T d1onra_           2 DKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQS   62 (316)
T ss_dssp             BHHHHHTTTSEEEEESSCHHHHHHHCCSEEECCHHHHHHHTTSGGGHHHHHHHHHHHHHHC
T ss_pred             ChHHHhhcCCEEECCCcCHHHHHhhCCCCccCCHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Confidence            6799999999999999999999999999999999999999999999999999999998653

>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=1.4e-20  Score=142.66  Aligned_cols=60  Identities=60%  Similarity=0.932  Sum_probs=57.7

Q ss_pred             ccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHHHHHHHHhhhhc
Q psy6604          25 DASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHLINKAVEFGKQN   84 (85)
Q Consensus        25 ~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~li~~a~~~~~~~   84 (85)
                      ++|++||++|+|||||+|++.|++|+|+|+|||||||++|.+.|.|+++|++++.++++.
T Consensus         1 s~L~~l~~~t~vv~DT~d~~~I~~~~p~~~TTNPSii~kA~~~~~y~~li~~~~~~~k~~   60 (319)
T d2e1da1           1 SALDQLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGKKL   60 (319)
T ss_dssp             CHHHHHTTTSEEEEECSCGGGTTTTCCSEEECCHHHHHHHHTSGGGHHHHHHHHHHHHHH
T ss_pred             ChhHHhhCCCEEeCCCcCHHHHHhcCCCCeeeCHHHHHHHhcChhHHHHHHHHHHHhhhc
Confidence            469999999999999999999999999999999999999999999999999999998864

>d1onra_ c.1.10.1 (A:) Transaldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Escherichia coli [TaxId: 562]

Probab=98.77  E-value=2.6e-10  Score=85.63  Aligned_cols=70  Identities=33%  Similarity=0.457  Sum_probs=65.8

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|+++|+||.++++++||+||+|++++.+.+...+|.   ...+.++.|+..++..++.+|+.+++|++.++.
T Consensus        73 ~d~l~v~~~~~i~~~v~G~VS~EVd~~l~~d~~~~i~---~A~~l~~l~~~~~i~~~~i~IKIPaT~eGi~A~  142 (316)
T d1onra_          73 TDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIA---KAKRLIKLYNDAGISNDRILIKLASTWQGIRAA  142 (316)
T ss_dssp             HHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHH---HHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCCceeEEeccCccCCHHHHHH---HHHHHHHHHHhcCCCCcceeeecCCcHHHHHHH
Confidence            3789999999999999999999999999999998888   789999999999999999999999999999873

>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.53  E-value=2.5e-09  Score=80.13  Aligned_cols=70  Identities=40%  Similarity=0.526  Sum_probs=65.7

Q ss_pred             ChhHHHhHchhhhhcCCCccccccccccccccceeeeeccccHHHHHhhCCCCCCCChHHHHhhhCchHHHHH
Q psy6604           1 MDKLVILFGTEILNIIPGRVSTEVDASLKLKDYTVVVADTGDFEAMKKYKPTDATTNPSLILQAATMPQYQHL   73 (85)
Q Consensus         1 ~dk~~v~~g~~~l~~v~GrvsTem~~L~~Lk~~T~VvADTgd~~~I~~y~p~DaTTNPSLIl~Aa~~~~y~~l   73 (85)
                      +|++.|++|.++++.+||+||+||++..+.+...+|.   ...++++.|+...+...+.+|+.+++|++.+++
T Consensus        72 ~d~~~~~~~~~~~~~~~G~VS~EVdp~la~d~~~~i~---~A~~l~~l~~~~~i~~~~v~IKIPaT~eGi~A~  141 (319)
T d2e1da1          72 IDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVA---RARRLIELYKEAGVGKDRILIKLSSTWEGIQAG  141 (319)
T ss_dssp             HHHHHHHHHHHHHHHCSSCEEEECCGGGTTCHHHHHH---HHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEECCCcccCHHHHHH---HHHHHHHHHHhcCCCCCceEEcCCCchHHHHHH
Confidence            3789999999999999999999999999999998887   789999999999999999999999999999875

>d1wx0a1 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate aldolase/transaldolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Decameric fructose-6-phosphate aldolase/transaldolase
species: Thermus thermophilus [TaxId: 274]

Probab=97.44  E-value=2.2e-05  Score=54.63  Aligned_cols=29  Identities=31%  Similarity=0.509  Sum_probs=25.7

Q ss_pred             eeccccHHHHHhhCC----CCCCCChHHHHhhh
Q psy6604          37 VADTGDFEAMKKYKP----TDATTNPSLILQAA   65 (85)
Q Consensus        37 vADTgd~~~I~~y~p----~DaTTNPSLIl~Aa   65 (85)
                      -.||+|++.|++|.+    .++||||||+.++.
T Consensus         4 ~lDtad~~eik~~~~~g~i~GvTTNPtl~~k~~   36 (211)
T d1wx0a1           4 YLDTASLEEIREIAAWGVLSGVTTNPTLVAKAF   36 (211)
T ss_dssp             EEECCCHHHHHHHHHHTCCCEEECCHHHHHHHH
T ss_pred             EEEcCCHHHHHHHhcCCCcCeEeeCHHHHHHcC
Confidence            469999999998885    78999999999984

>d1vpxa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Decameric fructose-6-phosphate aldolase/transaldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.21  E-value=2.5e-05  Score=55.07  Aligned_cols=41  Identities=27%  Similarity=0.476  Sum_probs=23.6

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhhhCchHHHHHHHHHH
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQAATMPQYQHLINKAV   78 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~~~~y~~li~~a~   78 (85)
                      +-.||+|++.|+++.+    .++||||||+.++..  .|...+.+..
T Consensus         5 l~lDtad~~~i~~~~~~g~i~GvTTNPsl~~k~g~--~~~~~~~~i~   49 (218)
T d1vpxa_           5 IFLDTANLEEIKKGVEWGIVDGVTTNPTLISKEGA--EFKQRVKEIC   49 (218)
T ss_dssp             EEEECCCHHHHHHHHHTTCCCEEECCC-------------CHHHHHH
T ss_pred             EEEeCCCHHHHHHHHhcCCcCcCccCHHHHHHcCC--CHHHHHHHHH
Confidence            5689999999988875    689999999999874  4555554443

>d1l6wa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Decameric fructose-6-phosphate aldolase/transaldolase
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=6.9e-05  Score=52.71  Aligned_cols=31  Identities=35%  Similarity=0.442  Sum_probs=26.6

Q ss_pred             eeeccccHHHHHhhCC----CCCCCChHHHHhhhC
Q psy6604          36 VVADTGDFEAMKKYKP----TDATTNPSLILQAAT   66 (85)
Q Consensus        36 VvADTgd~~~I~~y~p----~DaTTNPSLIl~Aa~   66 (85)
                      +-.||+|++.|+++.+    .++||||||+.++..
T Consensus         3 l~lDtAd~~eik~~~~~~~i~GvTTNPsll~k~~~   37 (220)
T d1l6wa_           3 LYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKK   37 (220)
T ss_dssp             EEEECCCHHHHHHHHTTSCCCEEECCHHHHHHHCS
T ss_pred             EEEEcCCHHHHHHHHhcCCCCEEecCHHHHHhCCC
Confidence            3479999999998886    679999999998764