Psyllid ID: psy6694

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MLRLLLVCTQEVTEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSARNGTGFQASGTIATPVENARLNPSYTTVKPPAHHPFLKRPILILKAMVPEVKVLTKLRVR
Secondary Structure (PSIPRED)
cccEEEEcccccccccccccEEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEEEEEcccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccEEcEEEEcc
Secondary Structure Prediction (SSPRO)
ccEEEEEEcccccccccccEEEEEEccccccccEEEEEEcccccEEEEEcccccEEEEEEEEEcccccEEEEEEEEccccccEcccccccccccccccccHcccccccccccccccEEcccccccccEEEEEEEEc
Coil and Loop (DISEMBL)
MLRLLLVCTQEVTEEQSDVTILRQINrlnddgsytfgyeaadgsfkietrdvggnvkgmfgfvdengelkrisysarngtgfqasgtiatpvenarlnpsyttvkppahhpflkrpILILKAMVPEVKVLTKLRVR
Flexible Loop (DISEMBL)
MLRLLLVCTqevteeqsdvtilrqinrlnddgsYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSARNGTGFQASGTIATPVENARLNPSYTTVKPPAHHPFLKRPILILKAMVPEVKVLTKLRVR
Low Complexity Region (SEG)
MLRLLLVCTQEVTEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSARNGTGFQASGTIATPVENARLNPSYTTVKPPAHHPFLKRPILILKAMVPEVKVLTKLRVR
Disordered region (IsUnstruct)
***LLLVCTQEVTEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSARNGTGFQASGTIATPVENARLNPSYTTVKPPAHHPFLKRPILILKAMVPEVKVLTK****
Disordered Region (DISOPRED)
MLRLLL*CTQEVT***********INRLNDDGSYTFGYEAADGS*********GNVKGMFGFVDENGELKRISYSARNGTGFQASGTIATPV***********VKPPAHHPFLKRPILILKAMVPEVKVLTKL***
Disordered Region (DISEMBL)
MLRLLLVCTQEVTEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSARNGTGFQASGTIATPVENARLNPSYTTVKPPAHHPFLKRPILILKAMVPEVKVLTKLRVR
Disordered Region (DISPRO)
MLRLLLVCTQEVTEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSARNGTGFQASGTIATPVENARLNPSYTTVKPPAHHPFLKRPILILKAMVPEVKVLTKLRVR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLRLLLVCTQEVTEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSARNGTGFQASGTIATPVENARLNPSYTTVKPPAHHPFLKRPILILKAMVPEVKVLTKLRVR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
242013789	733	hypothetical protein Phum_PHUM331820 [Pe	0.573	0.106	0.782	1e-30
328709224	500	PREDICTED: hypothetical protein LOC10057	0.514	0.14	0.771	4e-27
332021193	704	hypothetical protein G5I_10142 [Acromyrm	0.720	0.139	0.541	6e-25
307213608	716	hypothetical protein EAI_11787 [Harpegna	0.735	0.139	0.508	2e-23
322791509	715	hypothetical protein SINV_01405 [Solenop	0.720	0.137	0.518	2e-23
307185615	1206	hypothetical protein EAG_14231 [Camponot	0.720	0.081	0.457	4e-21
157131431	749	hypothetical protein AaeL_AAEL012088 [Ae	0.757	0.137	0.432	1e-20
321478861	220	hypothetical protein DAPPUDRAFT_303105 [	0.808	0.5	0.451	3e-20
223671090	201	TPA: putative cuticle protein [Bombyx mo	0.470	0.318	0.656	6e-19
170063815	802	conserved hypothetical protein [Culex qu	0.558	0.094	0.531	1e-18

>gi|242013789|ref|XP_002427583.1| hypothetical protein Phum_PHUM331820 [Pediculus humanus corporis] gi|212511998|gb|EEB14845.1| hypothetical protein Phum_PHUM331820 [Pediculus humanus corporis]

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/78 (78%), Positives = 70/78 (89%)

Query: 14  EEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRIS 73
           E Q  V IL+QINR+NDDGSYTFGYEAADGSFKIETRDV GNVKGMFGF++E+GELKR+S
Sbjct: 67  ETQDQVAILKQINRVNDDGSYTFGYEAADGSFKIETRDVNGNVKGMFGFINEDGELKRVS 126

Query: 74  YSARNGTGFQASGTIATP 91
           YSA NGTGFQ++GT+  P
Sbjct: 127 YSASNGTGFQSTGTLNIP 144

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328709224|ref|XP_003243902.1| PREDICTED: hypothetical protein LOC100572094 [Acyrthosiphon pisum]

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/70 (77%), Positives = 65/70 (92%)

Query: 18  DVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSAR 77
           DV+IL+QIN++NDDGSYTFGYEA+DGSFK+ETRDV GNVKGMFGFVD+ G LKR+SYSA 
Sbjct: 64  DVSILKQINKVNDDGSYTFGYEASDGSFKVETRDVAGNVKGMFGFVDDVGRLKRVSYSAS 123

Query: 78  NGTGFQASGT 87
           N +GFQA+G+
Sbjct: 124 NSSGFQAAGS 133

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021193|gb|EGI61578.1| hypothetical protein G5I_10142 [Acromyrmex echinatior]

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 79/109 (72%), Gaps = 11/109 (10%)

Query: 7   VCTQEVTEEQSD-VTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDE 65
           V  Q+ +E Q D V IL+QI ++N+DGSYT+GYEA DGSFK+E+RDV GN+KG FGFVD 
Sbjct: 19  VTDQQTSETQHDQVAILKQIRKVNEDGSYTYGYEAGDGSFKVESRDVLGNIKGTFGFVDA 78

Query: 66  NGELKRISYSARNGTGFQASGTIATPVEN--------ARLNPSYTTVKP 106
           NGE+KR+SYS+ NGTGF+A  T  +P++          R+N + TT +P
Sbjct: 79  NGEIKRVSYSSSNGTGFKA--TTMSPLQEHVSVVQSMPRINRTLTTKRP 125

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213608|gb|EFN88994.1| hypothetical protein EAI_11787 [Harpegnathos saltator]

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/112 (50%), Positives = 78/112 (69%), Gaps = 12/112 (10%)

Query: 7   VCTQEVTEEQSD--VTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVD 64
           V  Q+ +E   D  V IL+QI ++N+DGSYT+GYEA DGSFK+E+RDV GN+KG FGFVD
Sbjct: 19  VTDQQTSETHRDHQVAILKQIRKVNEDGSYTYGYEAGDGSFKVESRDVLGNIKGTFGFVD 78

Query: 65  ENGELKRISYSARNGTGFQASGTIATPVEN--------ARLNPSYTTVKPPA 108
            +GE+KR+SYS+ NGTGF+A  T  +P++          R+N +  T K P+
Sbjct: 79  ADGEIKRVSYSSSNGTGFKA--TTVSPLQEHVSVVQSIPRVNRTTATTKKPS 128

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322791509|gb|EFZ15900.1| hypothetical protein SINV_01405 [Solenopsis invicta]

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/110 (51%), Positives = 78/110 (70%), Gaps = 12/110 (10%)

Query: 7   VCTQEVTEEQSD--VTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVD 64
           V  Q+ +E   D  V IL+QI ++N+DGSYT+GYEA DGSFK+E+RDV GN+KG FGFVD
Sbjct: 19  VTDQQTSETNHDHQVAILKQIRKVNEDGSYTYGYEAGDGSFKVESRDVLGNIKGTFGFVD 78

Query: 65  ENGELKRISYSARNGTGFQASGTIATPVEN--------ARLNPSYTTVKP 106
            +GE+KR+SYS+ NGTGF+A  T  +P++          R+N + TT +P
Sbjct: 79  ADGEIKRVSYSSSNGTGFKA--TTMSPLQEHVSVVQSIPRVNRTLTTKRP 126

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307185615|gb|EFN71553.1| hypothetical protein EAG_14231 [Camponotus floridanus]

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 31/129 (24%)

Query: 7   VCTQEVTEEQSD--VTILRQINRLNDDGSYTFGYEAADGSFK------------------ 46
           V  Q+ +E Q D  V IL+QI ++N+DGSYT+GYEA DGSFK                  
Sbjct: 497 VTDQQTSETQHDHQVAILKQIRKVNEDGSYTYGYEAGDGSFKNLKLRYFRENLNGKYLLC 556

Query: 47  -IETRDVGGNVKGMFGFVDENGELKRISYSARNGTGFQASGTIATPVEN--------ARL 97
            +E+RDV GNVKG FGF+D +GE+KR+SYS+ NGTGF+A  T  +P++          R+
Sbjct: 557 QVESRDVLGNVKGTFGFIDADGEIKRVSYSSSNGTGFKA--TTMSPLQEHVSVVQSIPRV 614

Query: 98  NPSYTTVKP 106
           N + TT KP
Sbjct: 615 NRTLTTKKP 623

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157131431|ref|XP_001662245.1| hypothetical protein AaeL_AAEL012088 [Aedes aegypti] gi|108871541|gb|EAT35766.1| AAEL012088-PA [Aedes aegypti]

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 73/111 (65%), Gaps = 8/111 (7%)

Query: 8   CTQEVTEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENG 67
            T+  T++   + I++QI ++N DGSYT GYEA DG+FKIE+RDV GNVKG +G++DENG
Sbjct: 29  LTEAETKDPKKLEIIKQIRKINTDGSYTVGYEAEDGTFKIESRDVLGNVKGTYGYIDENG 88

Query: 68  ELKRISYSARNGTGFQASGTIATPVENARLNPSY--------TTVKPPAHH 110
           E++R+SY+A N TG + +       +   + P +        TT +PP++H
Sbjct: 89  EIQRVSYNAHNNTGIKPAPPPQVTEDVVHIPPRFNRSHIGAPTTRRPPSYH 139

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321478861|gb|EFX89818.1| hypothetical protein DAPPUDRAFT_303105 [Daphnia pulex]

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 78/124 (62%), Gaps = 14/124 (11%)

Query: 14  EEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRIS 73
           +  + V IL+QINR+NDDGSYT+G+EAADG+FK+ETRD  GNV+G +G+VDE G+LK + 
Sbjct: 24  QSTTPVPILKQINRVNDDGSYTYGFEAADGTFKVETRDNLGNVRGKYGYVDETGQLKTVE 83

Query: 74  YSARNGTGFQASGT-------IATPVENAR----LNPSYTTVKP-PAHHPFLKRPILILK 121
           Y+A  G GF+ASG         A P+  A+     +P     +P PA   F  RP ++ +
Sbjct: 84  YAA--GQGFEASGAHLPVDGNSAAPLPAAQPITAAHPRRPVARPVPAPTTFRPRPAVVQQ 141

Query: 122 AMVP 125
              P
Sbjct: 142 PAAP 145

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|223671090|tpd|FAA00496.1| TPA: putative cuticle protein [Bombyx mori]

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%)

Query: 13  TEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRI 72
           T + S V I++QI RLNDDGSYT GYEA DG+FKIE+RDV GNVKG FG++D++GE+KR+
Sbjct: 39  TADASKVEIVKQIRRLNDDGSYTIGYEADDGTFKIESRDVRGNVKGTFGYIDKDGEIKRV 98

Query: 73  SYSA 76
           +YS+
Sbjct: 99  TYSS 102

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170063815|ref|XP_001867267.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167881318|gb|EDS44701.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 61/79 (77%), Gaps = 3/79 (3%)

Query: 13  TEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRI 72
           T++   + I++QI + N+DGSYT GYEA DG+FKIE+RDV GN+KG +G+VDENG+++R+
Sbjct: 69  TKDPKKLEIIKQIRKFNNDGSYTVGYEAEDGTFKIESRDVLGNIKGTYGYVDENGQIQRV 128

Query: 73  SYSARNGTGFQASGTIATP 91
            Y+A N TG +   T+A P
Sbjct: 129 QYNAHNNTGIK---TMAPP 144

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
FB|FBgn0039480	366	Cpr97Ea "Cuticular protein 97E	0.713	0.265	0.457	1e-16
FB|FBgn0039481	235	Cpr97Eb "Cuticular protein 97E	0.625	0.361	0.466	3.7e-16
FB|FBgn0036680	597	Cpr73D "Cuticular protein 73D"	0.536	0.122	0.346	4.2e-07
FB|FBgn0039805	241	Cpr100A "Cuticular protein 100	0.580	0.327	0.353	4.3e-07
FB|FBgn0038819	381	Cpr92F "Cuticular protein 92F"	0.661	0.236	0.336	4.2e-06
FB|FBgn0002534	112	Lcp3 "Larval cuticle protein 3	0.654	0.794	0.301	4.3e-06
FB|FBgn0033598	214	Cpr47Eb "Cuticular protein 47E	0.632	0.401	0.343	5.3e-06
FB|FBgn0036618	217	Cpr72Eb "Cuticular protein 72E	0.522	0.327	0.328	1.6e-05
FB|FBgn0002535	112	Lcp4 "Larval cuticle protein 4	0.654	0.794	0.311	2.4e-05
FB|FBgn0038405	354	CG8927 [Drosophila melanogaste	0.477	0.183	0.369	2.7e-05

FB|FBgn0039480 Cpr97Ea "Cuticular protein 97Ea" [Drosophila melanogaster (taxid:7227)]

 Score = 210 (79.0 bits), Expect = 1.0e-16, P = 1.0e-16
 Identities = 49/107 (45%), Positives = 65/107 (60%)

Query:    19 VTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSARN 78
             V IL+QIN+ N+DGS T+GYE ADGSFKIET+   G VKG +G+VDE G+++ + Y A N
Sbjct:    57 VAILKQINKHNEDGSCTYGYEGADGSFKIETKLATGEVKGKYGYVDETGKVRVVEYGA-N 115

Query:    79 GTGFQASG---TIATPV---ENARLNPSYTTVKPPAH--HPF-LKRP 116
               GF  SG   T+A P    E  +  P Y     P     P+ ++RP
Sbjct:   116 KYGFLPSGEGITVAPPTLVDETLKEEPDYADEPAPQRPQKPYRVQRP 162

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0039481 Cpr97Eb "Cuticular protein 97Eb" [Drosophila melanogaster (taxid:7227)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 42/90 (46%), Positives = 58/90 (64%)

Query:     2 LRLLLVCTQEVTEEQSDVT----ILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVK 57
             L LLL+       +  D T    IL+QI++ NDDGSYT+GYEAAD SFKIET+   G V 
Sbjct:     8 LGLLLLAAHSAYAQHQDYTTPVPILKQIDKHNDDGSYTYGYEAADKSFKIETKYANGEVY 67

Query:    58 GMFGFVDENGELKRISYSARNGTGFQASGT 87
             G +G+VD+ G+++ I Y A    GF+ +G+
Sbjct:    68 GKYGYVDDQGKVREIEYGASK-RGFEPAGS 96

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0036680 Cpr73D "Cuticular protein 73D" [Drosophila melanogaster (taxid:7227)]

 Score = 126 (49.4 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 26/75 (34%), Positives = 43/75 (57%)

Query:    30 DDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSARNGTGFQASGTIA 89
             DD SY+F +   D S + E  D G  ++G++ ++D+ GE   + Y+A  GTGF+ S  + 
Sbjct:   123 DDPSYSFSFRTPDQS-RSEENDSGNRIRGLYSYLDDVGERHSVRYAAGAGTGFEISNAVP 181

Query:    90 -TPVENARLNPSYTT 103
              +P   A  +P YT+
Sbjct:   182 DSPSVVAYSSPLYTS 196

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0039805 Cpr100A "Cuticular protein 100A" [Drosophila melanogaster (taxid:7227)]

 Score = 119 (46.9 bits), Expect = 4.3e-07, P = 4.3e-07
 Identities = 29/82 (35%), Positives = 43/82 (52%)

Query:     6 LVCTQEVTEEQSDVTILRQINRLNDDGSYTFGYEAADG-SFKIETRDVGGNVKGMFGFVD 64
             L  +Q   ++     I+ +   L+ DG +   YE  DG +FK ET D  G   G + ++D
Sbjct:    13 LASSQHYHQDPKTAAIISEQRYLSGDGKFGAAYEQEDGINFKEET-DADGTRHGSYSYLD 71

Query:    65 ENGELKRISYSARNGTGFQASG 86
               G+ + ISY+A    GFQASG
Sbjct:    72 PTGQRRTISYTAGKN-GFQASG 92

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0038819 Cpr92F "Cuticular protein 92F" [Drosophila melanogaster (taxid:7227)]

 Score = 114 (45.2 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 31/92 (33%), Positives = 42/92 (45%)

Query:    30 DDGSYTFGYEAAD-GSFKIETRDVGGNVKGMFGFVDENGELKRISYSARNGTGFQASGTI 88
             D  S+T+ Y  AD  S K ETR   G   G + +VD +G ++ +SY+A    GF A GT 
Sbjct:    31 DPHSHTYSYGYADPNSQKHETRSHDGTTHGSYSYVDGHGHVQSVSYTADPHHGFNAVGTN 90

Query:    89 ATPVENARLNPSYTTVKPP-AHHPFLKRPILI 119
                       P Y       A+ P+   PI I
Sbjct:    91 LPQAPQVHAAPVYAAAHAHGAYAPYAHGPIHI 122

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0002534 Lcp3 "Larval cuticle protein 3" [Drosophila melanogaster (taxid:7227)]

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 28/93 (30%), Positives = 47/93 (50%)

Query:     1 MLRLLLVCT-QEVTEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGM 59
             M ++LLVC+   +    ++V +   +N +  DG +       DGS    T D+ GN+ G+
Sbjct:     1 MFKILLVCSLAALVAANANVEVKELVNDVQPDG-FVSKLVLDDGSASSATGDIHGNIDGV 59

Query:    60 FGFVDENGELKRISYSARNGTGFQA-SGTIATP 91
             F ++   G   R+SY A +  G+Q  S  + TP
Sbjct:    60 FEWISPEGVHVRVSYKA-DENGYQPQSDLLPTP 91

GO:0008363 "larval chitin-based cuticle development" evidence=IC

GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=NAS;IDA

GO:0031012 "extracellular matrix" evidence=IDA

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0033598 Cpr47Eb "Cuticular protein 47Eb" [Drosophila melanogaster (taxid:7227)]

 Score = 108 (43.1 bits), Expect = 5.3e-06, P = 5.3e-06
 Identities = 33/96 (34%), Positives = 44/96 (45%)

Query:    13 TEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIE--------TRDVGGNVKGMFGFVD 64
             TE++  V +LR     N DGS+ F YE  D S + E        T D    V GM+ ++D
Sbjct:    27 TEKREIVPLLRFETNKNPDGSFHFSYEGGDQSVRQEQGVIENAGTEDEALEVSGMYSYID 86

Query:    65 ENGELKRISYSARNGTGFQASGTIATPVENARLNPS 100
              +G    + Y+A    GF   GTI  P E   L  S
Sbjct:    87 ADGNTVEVHYTAGKN-GFVPIGTII-PKEITELAKS 120

GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISS

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0036618 Cpr72Eb "Cuticular protein 72Eb" [Drosophila melanogaster (taxid:7227)]

 Score = 104 (41.7 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 24/73 (32%), Positives = 37/73 (50%)

Query:    22 LRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGELKRISYSARNGTG 81
             + Q +  ++ G Y +GY A   S K ETR V G ++G F  +D NGE + + Y A +  G
Sbjct:    33 ISQYHHQDEHGQYAYGYMAPLYS-KHETRTVDGVIRGTFSHIDANGETQTVDYVA-DAEG 90

Query:    82 FQASGTIATPVEN 94
             F  +  +     N
Sbjct:    91 FHVTSNLPNQQAN 103

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0002535 Lcp4 "Larval cuticle protein 4" [Drosophila melanogaster (taxid:7227)]

 Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 29/93 (31%), Positives = 45/93 (48%)

Query:     1 MLRLLLVCTQ-EVTEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGM 59
             M ++LLVC    +     +  +   +N +  DG +       +GS    T DV GN+ G+
Sbjct:     1 MFKILLVCALVALVAANENPEVKELVNDVQADG-FVSKLVLDNGSAASATGDVHGNIDGV 59

Query:    60 FGFVDENGELKRISYSARNGTGFQA-SGTIATP 91
             F +V   GE  R+SY A +  G+Q  S  + TP
Sbjct:    60 FEWVSPEGEHVRVSYKA-DENGYQPQSDLLPTP 91

GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=NAS

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0038405 CG8927 [Drosophila melanogaster (taxid:7227)]

 Score = 106 (42.4 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 24/65 (36%), Positives = 33/65 (50%)

Query:    10 QEVTEEQSDVTILRQINRLNDDGSYTFGYEAADGSFKIETRDVGGNVKGMFGFVDENGEL 69
             Q+    Q     +R+    N+DGS T+GYE  DGSFK E        KG +G+VD +G  
Sbjct:   233 QQQRRRQPVSQTIRKWREENEDGSITWGYENDDGSFKEELIGTDCITKGTYGYVDPDGNK 292

Query:    70 KRISY 74
             +   Y
Sbjct:   293 REYHY 297

GO:0042302 "structural constituent of cuticle" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	136
pfam00379	51	pfam00379, Chitin_bind_4, Insect cuticle protein	7e-10

>gnl|CDD|215886 pfam00379, Chitin_bind_4, Insect cuticle protein

 Score = 50.7 bits (122), Expect = 7e-10
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 4/52 (7%)

Query: 34 YTFGYEAADGSFKIETR---DVGGNVKGMFGFVDENGELKRISYSARNGTGF 82
          Y+FGYE +DG  + E R   D GG VKG + +VD +G+L+ ++Y A +  GF
Sbjct: 1  YSFGYETSDGKTQEEGRGTEDDGGVVKGSYSYVDPDGKLRTVTYVA-DENGF 51

Many insect cuticular proteins include a 35-36 amino acid motif known as the R&R consensus. The extensive conservation of this region led to the suggestion that it functions to bind chitin. Provocatively, it has no sequence similarity to the well-known cysteine-containing chitin-binding domain found in chitinases and some peritrophic membrane proteins. Chitin binding has been shown experimentally for this region. Thus arthropods have two distinct classes of chitin binding proteins, those with the chitin-binding domain found in lectins, chitinases and peritrophic membranes (cysCBD) and those with the cuticular protein chitin-binding domain (non-cysCBD). Length = 51

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
PF00379	52	Chitin_bind_4: Insect cuticle protein; InterPro: I	99.67

>PF00379 Chitin_bind_4: Insect cuticle protein; InterPro: IPR000618 Insect cuticle is composed of proteins and chitin

Probab=99.67  E-value=2.2e-16  Score=99.91  Aligned_cols=47  Identities=40%  Similarity=0.916  Sum_probs=43.3

Q ss_pred             eeEEEecCCCCEEEEee-----CCCCeEEEEEEEECCCCcEEEEEEEeeCCCCc
Q psy6694          34 YTFGYEAADGSFKIETR-----DVGGNVKGMFGFVDENGELKRISYSARNGTGF   82 (136)
Q Consensus        34 Y~f~yet~dG~~~~E~g-----~~~~~v~GsYsy~~pdG~~~~V~Y~AD~e~Gf   82 (136)
                      |+|+|+++|| .++|++     +..++|+|+|+|++|||+.++|+|+|| ++||
T Consensus         1 Y~f~Y~~~dg-~~~e~~~~~~~~~~~~v~GsY~y~~pdG~~~~V~Y~Ad-~~Gf   52 (52)
T PF00379_consen    1 YSFGYETSDG-SRQEEGRPETEDEGGVVRGSYSYIDPDGQTRTVTYVAD-ENGF   52 (52)
T ss_pred             CeeEeEcCCC-CEEEEEEcccCCCCCEEEEEEEEECCCCCEEEEEEECC-CCCC
Confidence            7999999999 666666     488999999999999999999999999 9998

The cuticular proteins seem to be specific to the type of cuticle (flexible or stiff) that occur at stages of the insect development. The proteins found in the flexible cuticle of larva and pupa of different insects share a conserved C-terminal section [] such a region is also found in the soft endocuticle of adults insects [] as well as in other cuticular proteins including in arachnids []. In addition, cuticular proteins share hydrophobic regions dominated by tetrapeptide repeats (A-A-P-A/V), which are presumed to be functionally important [, ]. Many insect cuticle proteins also include a 35-36 amino acid motif known as the R and R consensus. An extended form of this motif has been shown [] to bind chitin. It has no sequence similiarity to the cysteine-containing chitin-binding domain of chitinases and some peritrophic membrane proteins, suggesting that arthropods have two distinct classes of chitin-binding proteins, those with the chitin-binding domains found in lectins, chitinases and peritrophic membranes (cysCBD), and those with the type of chitin-binding domains found in cuticular proteins (non-cysCBD) []. The cuticle protein signature has been found in locust cuticle proteins 7 (LM-7), 8 (LM-8), 19 (LM-19) and endocuticle structural glycoprotein ABD-4; Hyalophora cecropia (Cecropia moth) cuticle proteins 12 and 66; Drosophila melanogaster (Fruit fly) larval cuticles proteins I, II, III and IV (LCP1 to LCP4); drosophila pupal cuticle proteins PCP, EDG-78E and EDG-84E; Manduca sexta (Tobacco hawkmoth) cuticle protein LCP-14; Tenebrio molitor (Yellow mealworm) cuticle proteins ACP-20, A1A, A2B and A3A; and Araneus diadematus (Spider) cuticle proteins ACP 11.9, ACP 12.4, ACP 12.6, ACP 15.5 and ACP 15.7.; GO: 0042302 structural constituent of cuticle

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00