Psyllid ID: psy6733

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
Protein Sequence
MVPQGPGGADTDVFCPTAKYCTATLAATLDKQTLPPCLTPHPVGTSRCQPHYPYPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPECPSLY
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHcHHHHHHHHHcccccEEEEccccHHHHHHHHHHHHHHHHHHHHccccEEcHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccEEcccccccccccccccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHEEEEEEccccEEEEccccHHHHHHEEHccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHcHHHHHHHHHHHHHHHHHHHHHHHcEEEEcccccccccc
Coil and Loop (DISEMBL)
mvpqgpggadtdvfcptakYCTATLAAtldkqtlppcltphpvgtsrcqphypypatcsihhagregpkkfrdctpftfasvcsGISVYSLLIMVWMITIVCYRYLIVSsivpgstlgipdtVMGLTFVAAGVSVPDALSSLAVVKEGygdmavsnavgSNVFDILVCLGlpwflqtaiikpgshvnvyskgltysTISLFSTVVFLISAThmngwkldRRYGAILMMWYFVFLIVGSLYElnvfgymnppecpsly
Flexible Loop (DISEMBL)
mvpqgpggadtdvfCPTAKYCTATLAATLDKQTLPPCLTPHPVGTSRCQPHYPYPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPECPSLY
Low Complexity Region (SEG)
MVPQGPGGADTDVFCPTAKYCTATLAATLDKQTLPPCLTPHPVGTSRCQPHYPYPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPECPSLY
Disordered region (IsUnstruct)
**********TDVFCPTAKYCTATLAATLDKQTLPPCLTPHPVGTSRCQPHYPYPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYM*********
Disordered Region (DISOPRED)
*************************************LTPHPVGTSRCQPHYPYPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC****
Disordered Region (DISEMBL)
********ADTDVFCPTAKYCTATLAATLDKQTLPPCLTPHPVGTSRCQPHYPYPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPECPSLY
Disordered Region (DISPRO)
**************C*TAKYCTATLAATLDKQTLPPCLTPHPVGTSRCQPHYPYPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPECPSL*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVPQGPGGADTDVFCPTAKYCTATLAATLDKQTLPPCLTPHPVGTSRCQPHYPYPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPECPSLY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	257	2.2.26 [Sep-21-2011]
Q9VN12	642	Probable sodium/potassium	yes	N/A	0.677	0.271	0.721	2e-71
Q8CGQ8	622	Sodium/potassium/calcium	yes	N/A	0.634	0.262	0.482	7e-40
Q8NFF2	622	Sodium/potassium/calcium	yes	N/A	0.634	0.262	0.471	1e-39
Q9HC58	644	Sodium/potassium/calcium	no	N/A	0.634	0.253	0.471	3e-38
Q9EPQ0	624	Sodium/potassium/calcium	no	N/A	0.634	0.261	0.471	6e-38
Q99PD7	645	Sodium/potassium/calcium	no	N/A	0.634	0.252	0.471	7e-38
Q8C261	501	Sodium/potassium/calcium	no	N/A	0.575	0.295	0.496	4e-37
Q71RS6	500	Sodium/potassium/calcium	no	N/A	0.575	0.296	0.490	3e-36
Q49SH1	513	Sodium/potassium/calcium	no	N/A	0.560	0.280	0.493	3e-33
O54701	670	Sodium/potassium/calcium	no	N/A	0.692	0.265	0.368	3e-25

>sp|Q9VN12|NCKXH_DROME Probable sodium/potassium/calcium exchanger CG1090 OS=Drosophila melanogaster GN=CG1090 PE=2 SV=3

 Score =  268 bits (686), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 135/187 (72%), Positives = 153/187 (81%), Gaps = 13/187 (6%)

Query: 69  KKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTF 128
           +++R+  PFTF      IS YS   MVWMIT++            GSTL IPDTVMGLTF
Sbjct: 469 EQYRNWYPFTFLMSMVWISFYSYF-MVWMITVI------------GSTLAIPDTVMGLTF 515

Query: 129 VAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNV 188
           VAAGVSVPDALSS+AV+KEG+GDMAVSNA+GSNVFDILVCLGLPWF+QTAIIKPGSHVNV
Sbjct: 516 VAAGVSVPDALSSIAVIKEGFGDMAVSNAIGSNVFDILVCLGLPWFIQTAIIKPGSHVNV 575

Query: 189 YSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYM 248
            SKGL YST+SLFSTVVFLI +TH+NGWKLD+R G ILM+WY  F+ + SLYELNVFGYM
Sbjct: 576 ISKGLAYSTLSLFSTVVFLILSTHLNGWKLDKRLGIILMVWYLFFITLASLYELNVFGYM 635

Query: 249 NPPECPS 255
           NPPECPS
Sbjct: 636 NPPECPS 642

May function in the removal and maintenance of calcium homeostasis. Transports one Ca(2+) and 1 K(+) in exchange for 4 Na(+).
Drosophila melanogaster (taxid: 7227)

>sp|Q8CGQ8|NCKX4_MOUSE Sodium/potassium/calcium exchanger 4 OS=Mus musculus GN=Slc24a4 PE=2 SV=2

 Score =  164 bits (414), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 85/176 (48%), Positives = 115/176 (65%), Gaps = 13/176 (7%)

Query: 78  TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
           TF +    I+V+S L MVW++TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct: 456 TFITATLWIAVFSYL-MVWLVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 502

Query: 138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
            ++SL V ++G GDMAVSN +GSNVFDILV LG+PW LQT +I  GS V + S+GL YS 
Sbjct: 503 CMASLIVARQGLGDMAVSNTIGSNVFDILVGLGIPWGLQTMVINYGSTVKINSRGLVYSV 562

Query: 198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
           + L  +V   +   H+N W+LDR+ G  +++ Y VFL    + E NVF ++N P C
Sbjct: 563 VLLLGSVALTVLGIHLNKWRLDRKLGIYVLVLYAVFLCFSIMIEFNVFTFVNLPMC 618

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Mus musculus (taxid: 10090)

>sp|Q8NFF2|NCKX4_HUMAN Sodium/potassium/calcium exchanger 4 OS=Homo sapiens GN=SLC24A4 PE=2 SV=2

 Score =  163 bits (412), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/176 (47%), Positives = 115/176 (65%), Gaps = 13/176 (7%)

Query: 78  TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
           TF +    I+V+S  IMVW++TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct: 456 TFITATLWIAVFSY-IMVWLVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 502

Query: 138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
            ++SL V ++G GDMAVSN +GSNVFDILV LG+PW LQT ++  GS V + S+GL YS 
Sbjct: 503 CMASLIVARQGLGDMAVSNTIGSNVFDILVGLGVPWGLQTMVVNYGSTVKINSRGLVYSV 562

Query: 198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
           + L  +V   +   H+N W+LDR+ G  +++ Y +FL    + E NVF ++N P C
Sbjct: 563 VLLLGSVALTVLGIHLNKWRLDRKLGVYVLVLYAIFLCFSIMIEFNVFTFVNLPMC 618

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Homo sapiens (taxid: 9606)

>sp|Q9HC58|NCKX3_HUMAN Sodium/potassium/calcium exchanger 3 OS=Homo sapiens GN=SLC24A3 PE=2 SV=4

 Score =  158 bits (400), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/176 (47%), Positives = 115/176 (65%), Gaps = 13/176 (7%)

Query: 78  TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
           TFAS    I+ +S + MVWM+TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct: 479 TFASSTLWIAAFSYM-MVWMVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 525

Query: 138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
            ++SL V ++G GDMAVSN++GSNVFDIL+ LGLPW LQT  +  GS++ + S+GL YS 
Sbjct: 526 CMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYGSYIRLNSRGLIYSV 585

Query: 198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
             L ++V   +   H+N W+LD++ G   ++ Y VFL    + E NVF ++N P C
Sbjct: 586 GLLLASVFVTVFGVHLNKWQLDKKLGCGCLLLYGVFLCFSIMTEFNVFTFVNLPMC 641

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Homo sapiens (taxid: 9606)

>sp|Q9EPQ0|NCKX3_RAT Sodium/potassium/calcium exchanger 3 (Fragment) OS=Rattus norvegicus GN=Slc24a3 PE=2 SV=1

 Score =  157 bits (397), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 83/176 (47%), Positives = 114/176 (64%), Gaps = 13/176 (7%)

Query: 78  TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
           TFAS    I+ +S + MVWM+TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct: 460 TFASSTLWIAAFSYM-MVWMVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 506

Query: 138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
            ++SL V ++G GDMAVSN++GSNVFDIL+ LGLPW LQT  +  GS++ + S+GL YS 
Sbjct: 507 CMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYGSYIRLNSRGLIYSV 566

Query: 198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
             L ++V   +   H+N W+LD++ G   +  Y VFL    + E NVF ++N P C
Sbjct: 567 GLLLASVFVTVFGVHLNKWQLDKKLGCGCLFLYGVFLCFSIMTEFNVFTFVNLPMC 622

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Rattus norvegicus (taxid: 10116)

>sp|Q99PD7|NCKX3_MOUSE Sodium/potassium/calcium exchanger 3 OS=Mus musculus GN=Slc24a3 PE=2 SV=3

 Score =  157 bits (397), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 83/176 (47%), Positives = 114/176 (64%), Gaps = 13/176 (7%)

Query: 78  TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
           TFAS    I+ +S + MVWM+TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct: 481 TFASSTLWIAAFSYM-MVWMVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 527

Query: 138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
            ++SL V ++G GDMAVSN++GSNVFDIL+ LGLPW LQT  +  GS++ + S+GL YS 
Sbjct: 528 CMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYGSYIRLNSRGLIYSV 587

Query: 198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
             L ++V   +   H+N W+LD++ G   +  Y VFL    + E NVF ++N P C
Sbjct: 588 GLLLASVFVTVFGVHLNKWQLDKKLGCGCLFLYGVFLCFSIMTEFNVFTFVNLPMC 643

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Mus musculus (taxid: 10090)

>sp|Q8C261|NCKX5_MOUSE Sodium/potassium/calcium exchanger 5 OS=Mus musculus GN=Slc24a5 PE=2 SV=1

 Score =  155 bits (391), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/161 (49%), Positives = 105/161 (65%), Gaps = 13/161 (8%)

Query: 93  IMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDM 152
           I+VWM+T            V G TLGIPDTVMGLT +AAG S+PD ++S+ V ++G GDM
Sbjct: 352 ILVWMVT------------VTGETLGIPDTVMGLTLLAAGTSIPDTVTSVLVARKGKGDM 399

Query: 153 AVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATH 212
           A+SN VGSNVFD+L CLGLPWF++TA     + + V SKGLTY TISL  +++FL  A H
Sbjct: 400 AISNIVGSNVFDML-CLGLPWFIKTAFTNASAPIEVNSKGLTYITISLNISILFLFLAVH 458

Query: 213 MNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
            NGWKLDR+ G + ++ Y     +  LYE+ + G      C
Sbjct: 459 FNGWKLDRKLGVVCLVLYLGLATLSVLYEIGIIGNNRIRGC 499

Cation exchanger involved in pigmentation, possibly by participating in ion transport in melanosomes. Probably transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Mus musculus (taxid: 10090)

>sp|Q71RS6|NCKX5_HUMAN Sodium/potassium/calcium exchanger 5 OS=Homo sapiens GN=SLC24A5 PE=1 SV=1

 Score =  152 bits (383), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/161 (49%), Positives = 104/161 (64%), Gaps = 13/161 (8%)

Query: 93  IMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDM 152
           I+VWM+TI             G TL IPDTVMGLT +AAG S+PD ++S+ V ++G GDM
Sbjct: 351 ILVWMVTIT------------GETLEIPDTVMGLTLLAAGTSIPDTIASVLVARKGKGDM 398

Query: 153 AVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATH 212
           A+SN VGSNVFD+L CLG+PWF++TA I   +   V S+GLTY TISL  +++FL  A H
Sbjct: 399 AMSNIVGSNVFDML-CLGIPWFIKTAFINGSAPAEVNSRGLTYITISLNISIIFLFLAVH 457

Query: 213 MNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
            NGWKLDR+ G + ++ Y     +  LYEL + G      C
Sbjct: 458 FNGWKLDRKLGIVCLLSYLGLATLSVLYELGIIGNNKIRGC 498

Cation exchanger involved in pigmentation, possibly by participating in ion transport in melanosomes. Probably transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Homo sapiens (taxid: 9606)

>sp|Q49SH1|NCKX5_DANRE Sodium/potassium/calcium exchanger 5 OS=Danio rerio GN=slc24a5 PE=2 SV=1

 Score =  142 bits (357), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/158 (49%), Positives = 105/158 (66%), Gaps = 14/158 (8%)

Query: 93  IMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDM 152
           ++VWM+TIV            G TLGIPDTVMG+T +AAG S+PD ++S+ V +EG  DM
Sbjct: 364 VLVWMVTIV------------GETLGIPDTVMGMTLLAAGTSIPDTVASVMVAREGKSDM 411

Query: 153 AVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATH 212
           A+SN VGSNVFD+L CLGLPWF+QT  +  GS V V S GL + + +L  +++FL  A H
Sbjct: 412 AMSNIVGSNVFDML-CLGLPWFIQTVFVDVGSPVEVNSSGLVFMSCTLLLSIIFLFLAVH 470

Query: 213 MNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNP 250
           +NGWKLD + G + +  Y +F  +  LYEL + G  NP
Sbjct: 471 INGWKLDWKLGLVCLACYILFATLSILYELGIIGN-NP 507

Cation exchanger which plays a central role in pigmentation, possibly by participating in ion transport in melanosomes. Probably transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Danio rerio (taxid: 7955)

>sp|O54701|NCKX2_RAT Sodium/potassium/calcium exchanger 2 OS=Rattus norvegicus GN=Slc24a2 PE=2 SV=1

 Score =  115 bits (288), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 110/201 (54%), Gaps = 23/201 (11%)

Query: 54  YPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVP 113
           +P   ++    +   KKF    P TF    + I+V+S L++ W   +             
Sbjct: 490 FPLWITLPDVRKPASKKF---FPITFFGSITWIAVFSYLMVWWAHQV------------- 533

Query: 114 GSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW 173
           G T+GI + +MGLT +AAG S+PD ++S+ V ++G GDMAVS++VGSN+FDI V L LPW
Sbjct: 534 GETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPW 593

Query: 174 FLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVF 233
            L T II     V V S GL  + + LF  ++F+I +  +  W++++  G I+   YF F
Sbjct: 594 LLYT-IIHRFKPVTVSSNGLFCAIVLLFIMLIFVILSIALCKWRMNKILGFIMFGLYFAF 652

Query: 234 LIVGSLYELNVFGYMNPPECP 254
           L+V  L E  V       ECP
Sbjct: 653 LVVSVLLEDKVL------ECP 667

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
383856304	790	PREDICTED: probable sodium/potassium/cal	0.684	0.222	0.735	7e-72
307175558	655	Sodium/potassium/calcium exchanger 4 [Ca	0.684	0.268	0.719	7e-71
198454486	651	GA26275 [Drosophila pseudoobscura pseudo	0.684	0.270	0.724	8e-71
195156804	650	GL12321 [Drosophila persimilis] gi|19411	0.684	0.270	0.724	9e-71
195110451	629	GI24726 [Drosophila mojavensis] gi|19391	0.821	0.335	0.632	1e-70
345496028	687	PREDICTED: probable sodium/potassium/cal	0.719	0.269	0.694	1e-70
345496026	680	PREDICTED: probable sodium/potassium/cal	0.719	0.272	0.694	1e-70
322784400	553	hypothetical protein SINV_09711 [Solenop	0.684	0.318	0.730	2e-70
350416353	665	PREDICTED: probable sodium/potassium/cal	0.680	0.263	0.739	2e-70
170043511	644	potassium-dependent sodium-calcium excha	0.684	0.273	0.724	2e-70

>gi|383856304|ref|XP_003703649.1| PREDICTED: probable sodium/potassium/calcium exchanger CG1090-like [Megachile rotundata]

 Score =  276 bits (706), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 139/189 (73%), Positives = 155/189 (82%), Gaps = 13/189 (6%)

Query: 69  KKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTF 128
           +KFR+  PFTF      IS YS  IMVWMITI+            GSTLGIPDTVMGLTF
Sbjct: 615 EKFRNWYPFTFCVSMVWISFYSY-IMVWMITII------------GSTLGIPDTVMGLTF 661

Query: 129 VAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNV 188
           VAAGVSVPDALSSLAV+KEG GDMAVSNAVGSNVFDILVCLGLPWF+QTA+I+PGSHVNV
Sbjct: 662 VAAGVSVPDALSSLAVIKEGLGDMAVSNAVGSNVFDILVCLGLPWFIQTAMIQPGSHVNV 721

Query: 189 YSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYM 248
            S+GLTYST+SL STVVFL+ ATH+NGWKLDRRYG +LM+WY VF++  SLYELNVFG M
Sbjct: 722 TSRGLTYSTVSLLSTVVFLVLATHLNGWKLDRRYGVVLMLWYLVFIVFASLYELNVFGQM 781

Query: 249 NPPECPSLY 257
           NPP CPS +
Sbjct: 782 NPPVCPSAF 790

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307175558|gb|EFN65479.1| Sodium/potassium/calcium exchanger 4 [Camponotus floridanus]

 Score =  273 bits (697), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 136/189 (71%), Positives = 155/189 (82%), Gaps = 13/189 (6%)

Query: 69  KKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTF 128
           +K+R   PFTF      IS YS  IMVWMITI+            GSTLGIPDT+MGLTF
Sbjct: 480 EKWRRWYPFTFCISMIWISFYSY-IMVWMITII------------GSTLGIPDTMMGLTF 526

Query: 129 VAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNV 188
           VAAGVSVPDALSSLAV+KEG GDMAVSNAVGSNVFDILVCLGLPWF+QTA+I+PGSHVNV
Sbjct: 527 VAAGVSVPDALSSLAVIKEGLGDMAVSNAVGSNVFDILVCLGLPWFIQTAMIQPGSHVNV 586

Query: 189 YSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYM 248
            S+GLTYST+SL STVVFL+ ATH+NGWKLDRRYG +LM+WY +F++  SLYELNVFG M
Sbjct: 587 TSRGLTYSTVSLLSTVVFLVLATHLNGWKLDRRYGMVLMIWYLIFIVFASLYELNVFGEM 646

Query: 249 NPPECPSLY 257
           NPP CPS++
Sbjct: 647 NPPVCPSVF 655

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198454486|ref|XP_002137883.1| GA26275 [Drosophila pseudoobscura pseudoobscura] gi|198132815|gb|EDY68441.1| GA26275 [Drosophila pseudoobscura pseudoobscura]

 Score =  272 bits (696), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 137/189 (72%), Positives = 154/189 (81%), Gaps = 13/189 (6%)

Query: 69  KKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTF 128
           ++FR+  PFTF      IS YS   MVWMIT++            GSTL IPDTVMGLTF
Sbjct: 476 QQFRNWYPFTFLLSMVWISFYSYF-MVWMITVI------------GSTLAIPDTVMGLTF 522

Query: 129 VAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNV 188
           VAAGVSVPDALSS+AV+KEGYGDMAVSNA+GSNVFDILVCLGLPWF+QTAIIKPGSHVNV
Sbjct: 523 VAAGVSVPDALSSIAVIKEGYGDMAVSNAIGSNVFDILVCLGLPWFIQTAIIKPGSHVNV 582

Query: 189 YSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYM 248
            SKGL YST+SLFSTVVFLI +TH+NGWKLD+R G ILM+WY  F+ + SLYELNVFGYM
Sbjct: 583 ISKGLAYSTLSLFSTVVFLILSTHLNGWKLDKRLGIILMLWYLFFITLASLYELNVFGYM 642

Query: 249 NPPECPSLY 257
           NPPECPS +
Sbjct: 643 NPPECPSTF 651

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195156804|ref|XP_002019286.1| GL12321 [Drosophila persimilis] gi|194115877|gb|EDW37920.1| GL12321 [Drosophila persimilis]

 Score =  272 bits (696), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 137/189 (72%), Positives = 154/189 (81%), Gaps = 13/189 (6%)

Query: 69  KKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTF 128
           ++FR+  PFTF      IS YS   MVWMIT++            GSTL IPDTVMGLTF
Sbjct: 475 QQFRNWYPFTFLLSMVWISFYSYF-MVWMITVI------------GSTLAIPDTVMGLTF 521

Query: 129 VAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNV 188
           VAAGVSVPDALSS+AV+KEGYGDMAVSNA+GSNVFDILVCLGLPWF+QTAIIKPGSHVNV
Sbjct: 522 VAAGVSVPDALSSIAVIKEGYGDMAVSNAIGSNVFDILVCLGLPWFIQTAIIKPGSHVNV 581

Query: 189 YSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYM 248
            SKGL YST+SLFSTVVFLI +TH+NGWKLD+R G ILM+WY  F+ + SLYELNVFGYM
Sbjct: 582 ISKGLAYSTLSLFSTVVFLILSTHLNGWKLDKRLGIILMLWYLFFITLASLYELNVFGYM 641

Query: 249 NPPECPSLY 257
           NPPECPS +
Sbjct: 642 NPPECPSTF 650

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195110451|ref|XP_001999793.1| GI24726 [Drosophila mojavensis] gi|193916387|gb|EDW15254.1| GI24726 [Drosophila mojavensis]

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/237 (63%), Positives = 167/237 (70%), Gaps = 26/237 (10%)

Query: 30  DKQTLPPCLTPHPVG--TSRCQPH-------YPYPATCSIHHAGREGPKKFRDCTPFTFA 80
           DKQ  P    P P+   T   QP        YP    C         P+ +R+  PFTF 
Sbjct: 410 DKQREP---RPDPLARPTEGGQPALIAWYVVYPIHYLCKKTMPDCRQPQ-YRNWYPFTFL 465

Query: 81  SVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALS 140
                IS YS   MVWMIT++            GSTL IPDTVMGLTFVAAGVSVPDALS
Sbjct: 466 LSMIWISFYSYF-MVWMITVI------------GSTLAIPDTVMGLTFVAAGVSVPDALS 512

Query: 141 SLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISL 200
           S+AV+KEGYGDMAVSNA+GSNVFDILVCLGLPWF+QTAIIKPGSHVNV SKGL YST+SL
Sbjct: 513 SIAVIKEGYGDMAVSNAIGSNVFDILVCLGLPWFIQTAIIKPGSHVNVISKGLAYSTLSL 572

Query: 201 FSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPECPSLY 257
           FSTVVFLI +TH+NGWKLD+R G ILM+WY  F+ + SLYELNVFGYMNPPECPS Y
Sbjct: 573 FSTVVFLILSTHLNGWKLDKRLGIILMLWYLFFITLASLYELNVFGYMNPPECPSTY 629

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345496028|ref|XP_003427626.1| PREDICTED: probable sodium/potassium/calcium exchanger CG1090-like isoform 2 [Nasonia vitripennis]

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/203 (69%), Positives = 160/203 (78%), Gaps = 18/203 (8%)

Query: 60  IHHAGRE-----GPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPG 114
           IH+ GR        +K+R+  PFTF      IS YS  IMVWMITI+            G
Sbjct: 498 IHYMGRLTMPDCRQEKYRNWYPFTFCISMIWISFYSY-IMVWMITII------------G 544

Query: 115 STLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWF 174
           STLGIPDTVMGLTFVAAGVSVPDALSSLAV+KEG GDMAVSNAVGSNVFDILVCLGLPWF
Sbjct: 545 STLGIPDTVMGLTFVAAGVSVPDALSSLAVIKEGLGDMAVSNAVGSNVFDILVCLGLPWF 604

Query: 175 LQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFL 234
           +QTA+I+PGSHVNV S+GLTYST+SL STVVFL+ ATH NGWKLDRRYG +LM+WY +F+
Sbjct: 605 IQTAMIQPGSHVNVTSRGLTYSTLSLLSTVVFLVVATHFNGWKLDRRYGVVLMIWYLIFI 664

Query: 235 IVGSLYELNVFGYMNPPECPSLY 257
           ++ SLYELNVFG MNPP C S+Y
Sbjct: 665 VLASLYELNVFGQMNPPSCFSVY 687

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345496026|ref|XP_001605211.2| PREDICTED: probable sodium/potassium/calcium exchanger CG1090-like isoform 1 [Nasonia vitripennis]

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/203 (69%), Positives = 160/203 (78%), Gaps = 18/203 (8%)

Query: 60  IHHAGRE-----GPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPG 114
           IH+ GR        +K+R+  PFTF      IS YS  IMVWMITI+            G
Sbjct: 491 IHYMGRLTMPDCRQEKYRNWYPFTFCISMIWISFYSY-IMVWMITII------------G 537

Query: 115 STLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWF 174
           STLGIPDTVMGLTFVAAGVSVPDALSSLAV+KEG GDMAVSNAVGSNVFDILVCLGLPWF
Sbjct: 538 STLGIPDTVMGLTFVAAGVSVPDALSSLAVIKEGLGDMAVSNAVGSNVFDILVCLGLPWF 597

Query: 175 LQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFL 234
           +QTA+I+PGSHVNV S+GLTYST+SL STVVFL+ ATH NGWKLDRRYG +LM+WY +F+
Sbjct: 598 IQTAMIQPGSHVNVTSRGLTYSTLSLLSTVVFLVVATHFNGWKLDRRYGVVLMIWYLIFI 657

Query: 235 IVGSLYELNVFGYMNPPECPSLY 257
           ++ SLYELNVFG MNPP C S+Y
Sbjct: 658 VLASLYELNVFGQMNPPSCFSVY 680

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322784400|gb|EFZ11371.1| hypothetical protein SINV_09711 [Solenopsis invicta]

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/189 (73%), Positives = 154/189 (81%), Gaps = 13/189 (6%)

Query: 69  KKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTF 128
           +K+R   PFTF      IS YS  IMVWMITI+            GSTLGIPDTVMGLTF
Sbjct: 378 EKWRSWYPFTFCISMIWISFYSY-IMVWMITII------------GSTLGIPDTVMGLTF 424

Query: 129 VAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNV 188
           VAAGVSVPDALSSLAV+KEG GDMAVSNAVGSNVFDILVCLGLPWF+QTA+I+PGSHVNV
Sbjct: 425 VAAGVSVPDALSSLAVIKEGLGDMAVSNAVGSNVFDILVCLGLPWFIQTAMIQPGSHVNV 484

Query: 189 YSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYM 248
            S+GLTYST+SL STVVFL+ ATH+NGWKLDRRYG +LM+WY +F++  SLYELNVFG M
Sbjct: 485 TSRGLTYSTVSLLSTVVFLVVATHLNGWKLDRRYGMVLMVWYLIFIVFASLYELNVFGEM 544

Query: 249 NPPECPSLY 257
           NPP CPS Y
Sbjct: 545 NPPVCPSSY 553

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350416353|ref|XP_003490922.1| PREDICTED: probable sodium/potassium/calcium exchanger CG1090-like [Bombus impatiens]

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 139/188 (73%), Positives = 152/188 (80%), Gaps = 13/188 (6%)

Query: 70  KFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFV 129
           KFR+  PFTF      IS YS   MVWMITI+            GSTLGIPDTVMGLTFV
Sbjct: 491 KFRNWYPFTFCVSMVWISFYSYF-MVWMITII------------GSTLGIPDTVMGLTFV 537

Query: 130 AAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVY 189
           AAGVSVPDALSSLAV+KEG GDMAVSNAVGSNVFDILVCLGLPWF+QTA+I+PGSHVNV 
Sbjct: 538 AAGVSVPDALSSLAVIKEGLGDMAVSNAVGSNVFDILVCLGLPWFIQTAMIQPGSHVNVT 597

Query: 190 SKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMN 249
           S+GLTYST+SL STVVFL+ ATH+NGWKLDRRYGAILM+WY VF+   SLYELNVFG MN
Sbjct: 598 SRGLTYSTVSLLSTVVFLVLATHLNGWKLDRRYGAILMVWYLVFITFASLYELNVFGEMN 657

Query: 250 PPECPSLY 257
           PP C S +
Sbjct: 658 PPVCFSAF 665

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170043511|ref|XP_001849429.1| potassium-dependent sodium-calcium exchanger [Culex quinquefasciatus] gi|167866825|gb|EDS30208.1| potassium-dependent sodium-calcium exchanger [Culex quinquefasciatus]

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 137/189 (72%), Positives = 154/189 (81%), Gaps = 13/189 (6%)

Query: 69  KKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTF 128
           +K+++  PFTF      IS YS   MVWMITI+            GSTLGIPDTVMGLTF
Sbjct: 469 EKYKNWYPFTFVVSMIWISFYSYF-MVWMITII------------GSTLGIPDTVMGLTF 515

Query: 129 VAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNV 188
           VAAGVSVPDALSS+AV+KEGYGDMAVSNAVGSNVFDIL+CLGLPWF+QTAIIKPGSHVNV
Sbjct: 516 VAAGVSVPDALSSIAVIKEGYGDMAVSNAVGSNVFDILICLGLPWFIQTAIIKPGSHVNV 575

Query: 189 YSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYM 248
            SKGLTYST+SL STV FL+ ATHMNGWKLD+R G ILM+WY +F+ V SLYELN FG +
Sbjct: 576 ISKGLTYSTLSLLSTVFFLLFATHMNGWKLDKRLGIILMVWYLLFITVASLYELNFFGQL 635

Query: 249 NPPECPSLY 257
           NPPECPS+Y
Sbjct: 636 NPPECPSIY 644

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
FB|FBgn0037238	642	CG1090 [Drosophila melanogaste	0.677	0.271	0.721	9.2e-68
RGD|1305926	370	Slc24a4 "solute carrier family	0.634	0.440	0.482	1.8e-39
UNIPROTKB|F1SD72	555	SLC24A4 "Uncharacterized prote	0.634	0.293	0.482	2.3e-39
MGI|MGI:2447362	622	Slc24a4 "solute carrier family	0.634	0.262	0.482	2.8e-39
UNIPROTKB|F1Q3C2	539	SLC24A4 "Uncharacterized prote	0.634	0.302	0.482	3.7e-39
UNIPROTKB|F1MD60	605	SLC24A4 "Uncharacterized prote	0.634	0.269	0.482	4.3e-39
UNIPROTKB|Q8NFF2	622	SLC24A4 "Sodium/potassium/calc	0.634	0.262	0.471	4.8e-39
UNIPROTKB|F1P3N3	558	SLC24A3 "Uncharacterized prote	0.634	0.292	0.477	6.1e-39
UNIPROTKB|F1NF78	546	SLC24A5 "Uncharacterized prote	0.704	0.331	0.451	1.3e-38
UNIPROTKB|F1NT72	460	SLC24A5 "Uncharacterized prote	0.704	0.393	0.451	1.3e-38

FB|FBgn0037238 CG1090 [Drosophila melanogaster (taxid:7227)]

 Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
 Identities = 135/187 (72%), Positives = 153/187 (81%)

Query:    69 KKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTF 128
             +++R+  PFTF      IS YS   MVWMIT++            GSTL IPDTVMGLTF
Sbjct:   469 EQYRNWYPFTFLMSMVWISFYSYF-MVWMITVI------------GSTLAIPDTVMGLTF 515

Query:   129 VAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNV 188
             VAAGVSVPDALSS+AV+KEG+GDMAVSNA+GSNVFDILVCLGLPWF+QTAIIKPGSHVNV
Sbjct:   516 VAAGVSVPDALSSIAVIKEGFGDMAVSNAIGSNVFDILVCLGLPWFIQTAIIKPGSHVNV 575

Query:   189 YSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYM 248
              SKGL YST+SLFSTVVFLI +TH+NGWKLD+R G ILM+WY  F+ + SLYELNVFGYM
Sbjct:   576 ISKGLAYSTLSLFSTVVFLILSTHLNGWKLDKRLGIILMVWYLFFITLASLYELNVFGYM 635

Query:   249 NPPECPS 255
             NPPECPS
Sbjct:   636 NPPECPS 642

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0006816 "calcium ion transport" evidence=ISS

RGD|1305926 Slc24a4 "solute carrier family 24 (sodium/potassium/calcium exchanger), member 4" [Rattus norvegicus (taxid:10116)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 85/176 (48%), Positives = 115/176 (65%)

Query:    78 TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
             TF +    I+V+S L MVW++TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct:   204 TFITATLWIAVFSYL-MVWLVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 250

Query:   138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
              ++SL V ++G GDMAVSN +GSNVFDILV LG+PW LQT +I  GS V + S+GL YS 
Sbjct:   251 CMASLIVARQGLGDMAVSNTIGSNVFDILVGLGIPWGLQTMVINYGSTVKINSRGLVYSV 310

Query:   198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
             + L  +V   +   H+N W+LDR+ G  +++ Y VFL    + E NVF ++N P C
Sbjct:   311 VLLLGSVALTVLGIHLNKWRLDRKLGIYVLVLYAVFLCFSIMIEFNVFTFVNLPMC 366

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEP

GO:0008150 "biological_process" evidence=ND

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IMP

UNIPROTKB|F1SD72 SLC24A4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 85/176 (48%), Positives = 114/176 (64%)

Query:    78 TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
             TF      I+V+S L MVW++TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct:   389 TFVIATLWIAVFSYL-MVWLVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 435

Query:   138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
              ++SL V ++G GDMAVSN +GSNVFDILV LG+PW LQT +I  GS V + S+GL YS 
Sbjct:   436 CMASLIVARQGLGDMAVSNTIGSNVFDILVGLGIPWGLQTMVISYGSTVKINSRGLVYSV 495

Query:   198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
             + L  +V   +   H+N W+LDR+ G  +++ Y VFL    + E NVF ++N P C
Sbjct:   496 VLLLGSVALTVLGIHLNKWRLDRKLGVYVLVLYAVFLCFSIMIEFNVFTFVNLPMC 551

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

MGI|MGI:2447362 Slc24a4 "solute carrier family 24 (sodium/potassium/calcium exchanger), member 4" [Mus musculus (taxid:10090)]

 Score = 421 (153.3 bits), Expect = 2.8e-39, P = 2.8e-39
 Identities = 85/176 (48%), Positives = 115/176 (65%)

Query:    78 TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
             TF +    I+V+S L MVW++TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct:   456 TFITATLWIAVFSYL-MVWLVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 502

Query:   138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
              ++SL V ++G GDMAVSN +GSNVFDILV LG+PW LQT +I  GS V + S+GL YS 
Sbjct:   503 CMASLIVARQGLGDMAVSNTIGSNVFDILVGLGIPWGLQTMVINYGSTVKINSRGLVYSV 562

Query:   198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
             + L  +V   +   H+N W+LDR+ G  +++ Y VFL    + E NVF ++N P C
Sbjct:   563 VLLLGSVALTVLGIHLNKWRLDRKLGIYVLVLYAVFLCFSIMIEFNVFTFVNLPMC 618

GO:0005432 "calcium:sodium antiporter activity" evidence=ISA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005887 "integral to plasma membrane" evidence=IC

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=ISO;ISA

GO:0015293 "symporter activity" evidence=IEA

GO:0015297 "antiporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=ISA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=ISO;ISA

GO:0071805 "potassium ion transmembrane transport" evidence=ISA

UNIPROTKB|F1Q3C2 SLC24A4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 85/176 (48%), Positives = 114/176 (64%)

Query:    78 TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
             TF +    I+V+S L MVW++TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct:   373 TFITATLWIAVFSYL-MVWLVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 419

Query:   138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
              ++SL V ++G GDMAVSN +GSNVFDILV LG+PW LQT +I  GS V + S+GL YS 
Sbjct:   420 CMASLIVARQGLGDMAVSNTIGSNVFDILVGLGIPWGLQTMVINYGSTVKINSRGLVYSV 479

Query:   198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
             + L  +V   +   H+N W+LDR+ G  ++  Y VFL    + E NVF ++N P C
Sbjct:   480 VLLLGSVALTVLGIHVNKWRLDRKLGMCVLALYAVFLCFSIMIEFNVFTFVNLPMC 535

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|F1MD60 SLC24A4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 418 (152.2 bits), Expect = 4.3e-39, P = 4.3e-39
 Identities = 85/176 (48%), Positives = 113/176 (64%)

Query:    78 TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
             TF      I+V+S L MVW++TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct:   439 TFVIATLWIAVFSYL-MVWLVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 485

Query:   138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
              ++SL V ++G GDMAVSN +GSNVFDILV LG+PW LQT ++  GS V + S+GL YS 
Sbjct:   486 CMASLIVARQGLGDMAVSNTIGSNVFDILVGLGIPWGLQTMVVNYGSTVKINSRGLVYSV 545

Query:   198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
               L  +V   +   H+N WKLDR+ G  +++ Y VFL    + E NVF ++N P C
Sbjct:   546 ALLLGSVALTVLGIHLNKWKLDRKLGVYVLVLYAVFLCFSIMIEFNVFTFVNLPMC 601

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q8NFF2 SLC24A4 "Sodium/potassium/calcium exchanger 4" [Homo sapiens (taxid:9606)]

 Score = 419 (152.6 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 83/176 (47%), Positives = 115/176 (65%)

Query:    78 TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
             TF +    I+V+S  IMVW++TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct:   456 TFITATLWIAVFSY-IMVWLVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 502

Query:   138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
              ++SL V ++G GDMAVSN +GSNVFDILV LG+PW LQT ++  GS V + S+GL YS 
Sbjct:   503 CMASLIVARQGLGDMAVSNTIGSNVFDILVGLGVPWGLQTMVVNYGSTVKINSRGLVYSV 562

Query:   198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
             + L  +V   +   H+N W+LDR+ G  +++ Y +FL    + E NVF ++N P C
Sbjct:   563 VLLLGSVALTVLGIHLNKWRLDRKLGVYVLVLYAIFLCFSIMIEFNVFTFVNLPMC 618

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0015293 "symporter activity" evidence=IEA

GO:0015297 "antiporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=TAS

GO:0006811 "ion transport" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|F1P3N3 SLC24A3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 84/176 (47%), Positives = 115/176 (65%)

Query:    78 TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPD 137
             TFAS    I+ +S + MVWM+TI+ Y            TLGIPD +MG+TF+AAG SVPD
Sbjct:   393 TFASSTLWIAAFSYM-MVWMVTIIGY------------TLGIPDVIMGITFLAAGTSVPD 439

Query:   138 ALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYST 197
              ++SL V ++G GDMAVSN++GSNVFDIL+ LGLPW LQT  +  GS++ + S+GL YS 
Sbjct:   440 CMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVNYGSYIRLNSRGLIYSV 499

Query:   198 ISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPEC 253
               L ++V   +   HMN WKLD++ G + +  Y +FL    + E NVF ++N P C
Sbjct:   500 GLLLASVFVTVFGVHMNKWKLDKKLGCVCLSLYGIFLCFSIMTEFNVFTFVNLPMC 555

GO:0016021 "integral to membrane" evidence=IEA

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=IEA

UNIPROTKB|F1NF78 SLC24A5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 89/197 (45%), Positives = 125/197 (63%)

Query:    55 PATCSIHHAGREGPKKF-RDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVP 113
             P T  ++    +  ++F R+    TF    + IS  +  ++VWMITI             
Sbjct:   359 PITTLLYLTTPDCRRRFWRNWFMVTFFMSAAWISAITY-VLVWMITIA------------ 405

Query:   114 GSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW 173
             G TLGIP++VMGLT +AAG SVPD ++S+ V ++G GDMA+SN VGSNVFD+L CLG+PW
Sbjct:   406 GETLGIPESVMGLTLLAAGTSVPDTVASVLVARKGNGDMAMSNIVGSNVFDML-CLGIPW 464

Query:   174 FLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVF 233
             F++TA I     + V S GLTY+  SL  +VVF+  A H+NGWK+D++ GAI ++ Y VF
Sbjct:   465 FIKTAFINTSEPIEVNSSGLTYTATSLICSVVFIFLAIHLNGWKIDKKLGAICLILYLVF 524

Query:   234 LIVGSLYELNVFGYMNP 250
              ++  LYEL + G  NP
Sbjct:   525 TVLSILYELGIIGN-NP 540

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NT72 SLC24A5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 89/197 (45%), Positives = 125/197 (63%)

Query:    55 PATCSIHHAGREGPKKF-RDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVP 113
             P T  ++    +  ++F R+    TF    + IS  +  ++VWMITI             
Sbjct:   273 PITTLLYLTTPDCRRRFWRNWFMVTFFMSAAWISAITY-VLVWMITIA------------ 319

Query:   114 GSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW 173
             G TLGIP++VMGLT +AAG SVPD ++S+ V ++G GDMA+SN VGSNVFD+L CLG+PW
Sbjct:   320 GETLGIPESVMGLTLLAAGTSVPDTVASVLVARKGNGDMAMSNIVGSNVFDML-CLGIPW 378

Query:   174 FLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVF 233
             F++TA I     + V S GLTY+  SL  +VVF+  A H+NGWK+D++ GAI ++ Y VF
Sbjct:   379 FIKTAFINTSEPIEVNSSGLTYTATSLICSVVFIFLAIHLNGWKIDKKLGAICLILYLVF 438

Query:   234 LIVGSLYELNVFGYMNP 250
              ++  LYEL + G  NP
Sbjct:   439 TVLSILYELGIIGN-NP 454

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VN12	NCKXH_DROME	No assigned EC number	0.7219	0.6770	0.2710	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	257
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	8e-31
pfam01699	135	pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot	1e-22
TIGR00367	307	TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang	1e-21
COG0530	320	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion	9e-19
TIGR00367	307	TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang	1e-14
COG0530	320	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion	2e-13
PRK10734	325	PRK10734, PRK10734, putative calcium/sodium:proton	1e-10
TIGR00845	928	TIGR00845, caca, sodium/calcium exchanger 1	4e-09
PRK10734	325	PRK10734, PRK10734, putative calcium/sodium:proton	6e-09
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	1e-06
PLN03151	650	PLN03151, PLN03151, cation/calcium exchanger; Prov	4e-04

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score =  120 bits (301), Expect = 8e-31
 Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 21/190 (11%)

Query: 54   YPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVP 113
            +P   ++    R+  +KF      TF      I+++S L MVW    V            
Sbjct: 916  FPLWLTVPDVRRQEARKF---FVITFLGSIMWIAMFSYL-MVWWAHQV------------ 959

Query: 114  GSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW 173
            G T+GI + +MGLT +AAG S+PD ++S+ V ++G GDMAVS++VGSN+FDI V L +PW
Sbjct: 960  GETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPW 1019

Query: 174  FLQTAI--IKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYF 231
             L + I  ++P   V V S GL  + + LF  ++F+IS+     W++++  G  + + YF
Sbjct: 1020 LLFSLINGLQP---VPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYF 1076

Query: 232  VFLIVGSLYE 241
            VFLI+  + E
Sbjct: 1077 VFLIISVMLE 1086

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein

 Score = 89.6 bits (223), Expect = 1e-22
 Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 7/140 (5%)

Query: 98  ITIVCYRYLIVSSIVP-GSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSN 156
           + I+    L+V S       LGI  TV+GLT +A G S+P+  SS+    +G  D+A+ N
Sbjct: 1   LLIILLADLLVDSAESIAEVLGISPTVIGLTLLALGTSLPELFSSIIAALKGNADLALGN 60

Query: 157 AVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGW 216
            +GSN+F+IL+ LGL   +    +     V V    L +S + L   ++ L      +  
Sbjct: 61  VIGSNLFNILLVLGLSALISPIGL----KVLVSPLSLDFSFLLLVLLLLLLFLLL--SDG 114

Query: 217 KLDRRYGAILMMWYFVFLIV 236
           ++ R  G +L++ Y V+L++
Sbjct: 115 RISRFEGLVLLLLYIVYLVL 134

This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3. Length = 135

>gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein

 Score = 91.2 bits (227), Expect = 1e-21
 Identities = 45/144 (31%), Positives = 80/144 (55%), Gaps = 10/144 (6%)

Query: 91  LLIMVWMITIVCYRYLIV-SSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGY 149
           +L+++ +I +V    L+V  ++     LGI + ++GLT +A G S+P+ + SLA  ++G 
Sbjct: 173 VLLIIGLIGLVVGSRLLVDGAVKIAEILGISEKIIGLTLLAIGTSLPELVVSLAAARKGL 232

Query: 150 GDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLIS 209
           GD+AV N +GSN+F+ILV LG+P       ++P ++       L    + + + ++ L  
Sbjct: 233 GDIAVGNVIGSNIFNILVGLGVPSLFMPIPVEPLAYN------LDAPVMVIVTLLLMLFF 286

Query: 210 ATHMNGWKLDRRYGAILMMWYFVF 233
            T M   KL R  G +L+  Y  +
Sbjct: 287 KTSM---KLGRWEGILLLALYIAY 307

This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat [Unknown function, General]. Length = 307

>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

 Score = 83.4 bits (207), Expect = 9e-19
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)

Query: 104 RYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVF 163
             L+  ++      GI + ++GLT VA G S+P+ + S+   ++G  D+AV N +GSN+F
Sbjct: 192 ELLVDGAVEIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARKGEDDIAVGNVIGSNIF 251

Query: 164 DILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYG 223
           +IL+ LG+      A+I P +     S  L  + + +  T++ L+        ++ R+ G
Sbjct: 252 NILIVLGIS-----ALIGPITVEP--SALLVDAPVLILVTLLLLLFLA-RRRRRIGRKEG 303

Query: 224 AILMMWYFVFLI 235
            +L+  Y V++ 
Sbjct: 304 LLLLGLYIVYVA 315

Length = 320

>gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 86  ISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVV 145
           + +   LI+  ++ I      + SS+     LGI   ++G+T VA G S+P+  +SL   
Sbjct: 1   LLLIGYLILGLILLIYGADLFVKSSVRIARHLGISPLIIGVTVVAIGTSLPELFTSLIAS 60

Query: 146 KEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVV 205
             G  D+ V N +GSN+F+IL+ LGL     +AI  P   + V    L    +      +
Sbjct: 61  LMGQPDIGVGNVIGSNIFNILLILGL-----SAIFSP---IIVDKDWLRRDILFYLLVSI 112

Query: 206 FLISATHMNGWKLDRRYGAILMMWYFVFL 234
            L+           R  G +L++ Y V+L
Sbjct: 113 LLLFFGLDGQI--SRIDGVVLLILYIVYL 139

This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat [Unknown function, General]. Length = 307

>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 17/157 (10%)

Query: 87  SVYSLLIMVWMITIVCYRYLIVSS--IVPGST-----LGIPDTVMGLTFVAAGVSVPDAL 139
           S   +L+++ ++ I     L+  +  +V  ++      GI + ++GLT VA G S+P+  
Sbjct: 3   SALEMLLLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELA 62

Query: 140 SSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTIS 199
            SL     G  D+AV N +GSN+F+IL+ LGL      A+I P                 
Sbjct: 63  VSLVAALSGNPDIAVGNVLGSNIFNILLILGL-----AALIAPLKV-----DSDVLRREI 112

Query: 200 LFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIV 236
            F  +  LI    +    L R  G +L++ Y ++L  
Sbjct: 113 PFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLYLYY 149

Length = 320

>gnl|CDD|182684 PRK10734, PRK10734, putative calcium/sodium:proton antiporter; Provisional

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 45/145 (31%), Positives = 80/145 (55%), Gaps = 12/145 (8%)

Query: 92  LIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGD 151
           LI++ M T    R +I ++ V  +   I +  +GLT +A G S+P+  +++A  ++G  D
Sbjct: 183 LIIMPMAT----RMVIDNATVLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGEND 238

Query: 152 MAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISAT 211
           +AV N +GSN+F+I++ LGLP     A+I PG  +N  +    Y  + L S +  L+   
Sbjct: 239 IAVGNIIGSNIFNIVIVLGLP-----ALISPG-EINPLAFSRDYWVMLLVSVIFALLCWR 292

Query: 212 HMNGWKLDRRYGAILMMWYFVFLIV 236
                ++ R  GA+L+  + V+L +
Sbjct: 293 RKR--RIGRGAGALLLGGFIVWLAM 315

Length = 325

>gnl|CDD|233149 TIGR00845, caca, sodium/calcium exchanger 1

 Score = 56.3 bits (136), Expect = 4e-09
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 5/97 (5%)

Query: 114 GSTLGIPDTVMGLTFVAAGVSVPDALSS-LAVVKEGYGDMAVSNAVGSNVFDILVCLGLP 172
           G T+G+ D+V  + FVA G SVPD  +S +A  ++ Y D ++ N  GSN  ++ + +G+ 
Sbjct: 781 GCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVA 840

Query: 173 WFLQTAIIKP--GSHVNVYSKGLTYSTISLFSTVVFL 207
           W +  AI     G+   V    L +S ++LF+   F+
Sbjct: 841 WSI-AAIYHAANGTQFKVSPGTLAFS-VTLFTIFAFI 875

The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]. Length = 928

>gnl|CDD|182684 PRK10734, PRK10734, putative calcium/sodium:proton antiporter; Provisional

 Score = 55.0 bits (133), Expect = 6e-09
 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 5/67 (7%)

Query: 116 TLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFL 175
           T GIP  ++G+T V  G S+P+ + S+A    G  D+AV  A+GSN+ +IL+ LGL    
Sbjct: 32  TFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILLILGL---- 87

Query: 176 QTAIIKP 182
             A+I+P
Sbjct: 88  -AALIRP 93

Length = 325

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 48.8 bits (116), Expect = 1e-06
 Identities = 27/83 (32%), Positives = 45/83 (54%)

Query: 88  VYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKE 147
           ++ ++ +   + IVC  Y + +  V    L I + V G TF+AAG S P+  +SL  V  
Sbjct: 461 IFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFI 520

Query: 148 GYGDMAVSNAVGSNVFDILVCLG 170
            + ++ +   VGS VF+IL  +G
Sbjct: 521 SHSNVGIGTIVGSAVFNILFVIG 543

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|215604 PLN03151, PLN03151, cation/calcium exchanger; Provisional

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 9/140 (6%)

Query: 105 YLIVSSIVP-----GSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGD---MAVSN 156
           Y+I + +V      G   GI  +++GLT +A G S+ D +S++A+   G GD   +A+S 
Sbjct: 497 YMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSG 555

Query: 157 AVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGW 216
                +F+ LV LG+   L      P S++      L Y+   L S +++ +     N  
Sbjct: 556 CYAGPMFNTLVGLGMSMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDM 615

Query: 217 KLDRRYGAILMMWYFVFLIV 236
           + ++  G  L+  Y +FL  
Sbjct: 616 RPNKTLGVGLIALYLIFLTF 635

Length = 650

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	257
KOG1307|consensus	588		100.0
TIGR00927	1096	2A1904 K+-dependent Na+/Ca+ exchanger.	100.0
PLN03151	650	cation/calcium exchanger; Provisional	99.96
KOG2399|consensus	605		99.93
TIGR00845	928	caca sodium/calcium exchanger 1. This model is spe	99.92
TIGR00927	1096	2A1904 K+-dependent Na+/Ca+ exchanger.	99.89
PRK10734	325	putative calcium/sodium:proton antiporter; Provisi	99.86
COG0530	320	ECM27 Ca2+/Na+ antiporter [Inorganic ion transport	99.86
PRK10734	325	putative calcium/sodium:proton antiporter; Provisi	99.86
TIGR00367	307	K+-dependent Na+/Ca+ exchanger related-protein. Th	99.85
PLN03151	650	cation/calcium exchanger; Provisional	99.84
TIGR00367	307	K+-dependent Na+/Ca+ exchanger related-protein. Th	99.83
KOG1307|consensus	588		99.83
COG0530	320	ECM27 Ca2+/Na+ antiporter [Inorganic ion transport	99.83
PF01699	140	Na_Ca_ex: Sodium/calcium exchanger protein; InterP	99.82
TIGR00846	365	caca2 calcium/proton exchanger. This model is gene	99.8
KOG1306|consensus	596		99.79
TIGR00378	349	cax calcium/proton exchanger (cax).	99.71
TIGR00846	365	caca2 calcium/proton exchanger. This model is gene	99.69
TIGR00378	349	cax calcium/proton exchanger (cax).	99.69
TIGR00845	928	caca sodium/calcium exchanger 1. This model is spe	99.42
KOG2399|consensus	605		99.3
PRK10599	366	calcium/sodium:proton antiporter; Provisional	99.12
COG0387	368	ChaA Ca2+/H+ antiporter [Inorganic ion transport a	99.03
KOG1397|consensus	441		98.83
KOG1397|consensus	441		98.67
COG0387	368	ChaA Ca2+/H+ antiporter [Inorganic ion transport a	98.44
KOG1306|consensus	596		96.36
PRK10599	366	calcium/sodium:proton antiporter; Provisional	95.72

>KOG1307|consensus

Probab=100.00  E-value=3.4e-49  Score=370.97  Aligned_cols=206  Identities=36%  Similarity=0.630  Sum_probs=193.1

Q ss_pred             hhccCCCCCCCCCCCCCCCccccccc--cceeeeeeeeeec-CCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6733          28 TLDKQTLPPCLTPHPVGTSRCQPHYP--YPATCSIHHAGRE-GPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYR  104 (257)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~F~~si~WI~~~s~~vv~~~l~~~~a~  104 (257)
                      ..||+++.|+.+.||+++ +||.+|.  +|+.+|+|+|+|| |+||+||||++||+.||+||+++|| +|+||+.+    
T Consensus       376 ~~~e~~e~pl~~~wP~~~-~k~l~y~~~~Pi~fpLw~TvPdvrkp~~rkfF~vTFigSIlWIA~fSY-LMVWwa~~----  449 (588)
T KOG1307|consen  376 EEEEPEEEPLSFDWPETK-RKRLTYAFLAPIVFPLWLTVPDVRKPRSRKFFPVTFIGSILWIAAFSY-LMVWWANI----  449 (588)
T ss_pred             hhccccCCCcCCCCccch-hheeeeEEEeeeeeeEEEecCCcCCccccceeehHHHHHHHHHHHHHH-HHHHHHHH----
Confidence            456666779999999955 5579997  7999999999998 9999999999999999999999999 69999998    


Q ss_pred             hhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhHHhHhhhccCCc
Q psy6733         105 YLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGS  184 (257)
Q Consensus       105 ~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~li~~~~~~~~~  184 (257)
                              +|+++|||+.+||+|++|+|||+||+++|+++||||.+|||+++.+|||+||+++|||+||++..+....++
T Consensus       450 --------iGeT~gIp~eIMGLTiLAAGTSIPDlitSvIVARKGlGDMAVSsSiGSNiFDI~VGLplPWLL~~lI~~~~~  521 (588)
T KOG1307|consen  450 --------IGETLGIPDEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNIFDILVGLPLPWLLYTLIYGFKS  521 (588)
T ss_pred             --------cccccCCCHHHhhhhhhhcCCchHHhhHhhhhcccccccceeecccccchhheeecCCcHHHHHHHHhhcCC
Confidence                    999999999999999999999999999999999999999999999999999999999999999988766555


Q ss_pred             eeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy6733         185 HVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGY  247 (257)
Q Consensus       185 ~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~il~e~~vi~~  247 (257)
                      ++.++++++.+++.++++++++++.+++++|||++|..|+.|+.+|++|++++++.|.+++..
T Consensus       522 ~i~vsS~GL~csi~lLf~ml~v~v~~ia~~rWrMnK~lG~~m~llY~~Fl~~svmlE~~v~tc  584 (588)
T KOG1307|consen  522 KISVSSNGLVCSIGLLFAMLIVLVLGIALSRWRMNKILGFLMILLYFVFLIISVMLETDVLTC  584 (588)
T ss_pred             ceeecCCceehHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHhhhheecceecc
Confidence            588999999999999999999999999999999999999999999999999999999999874

>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger

Probab=100.00  E-value=9.6e-41  Score=335.21  Aligned_cols=200  Identities=34%  Similarity=0.583  Sum_probs=183.2

Q ss_pred             cCCCCCCCCCCCCCCCccccccc--cceeeeeeeeeec-CCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy6733          31 KQTLPPCLTPHPVGTSRCQPHYP--YPATCSIHHAGRE-GPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLI  107 (257)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~F~~si~WI~~~s~~vv~~~l~~~~a~~lv  107 (257)
                      ||++.|+.++||.+.. +|..|.  ||+.+++++++|| |+++|++||+++|++|++||+.++| +++|++..       
T Consensus       888 eeee~~~~~~~P~~~~-~~~~wvl~~Pi~~~l~~TIPDcrk~~~~k~y~ltFi~SIiwIsi~Sy-ilV~~at~-------  958 (1096)
T TIGR00927       888 EENEEPLSLEWPETRQ-KQAIYLFLLPIVFPLWLTVPDVRRQEARKFFVITFLGSIMWIAMFSY-LMVWWAHQ-------  958 (1096)
T ss_pred             ccccccccccCCcccc-ceeEeEEecchhheeeeecCCCCcccccceeeehHHHHHHHHHHHHH-HHHHHHHH-------
Confidence            3567899999998776 468885  8999999999998 9999999999999999999999999 69999887       


Q ss_pred             hcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhHHhHhhhccCCceeE
Q psy6733         108 VSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVN  187 (257)
Q Consensus       108 ~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~li~~~~~~~~~~v~  187 (257)
                           +|+.+|||++++|+||+|+|||+||+++|+.+||+|++|||++|++|||+||+++++|+||+++... ....++.
T Consensus       959 -----IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnIllgLGlPWlI~~li-~g~~pV~ 1032 (1096)
T TIGR00927       959 -----VGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWLLFSLI-NGLQPVP 1032 (1096)
T ss_pred             -----hhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHccCCcceeeeccccchheeeeeccHHHHHHHHh-ccCccee
Confidence                 9999999999999999999999999999999999999999999999999999999999999998765 3345677


Q ss_pred             eccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHHHhhcccc
Q psy6733         188 VYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVF  245 (257)
Q Consensus       188 v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~il~e~~vi  245 (257)
                      +++.++.+++++++.+++++++.+.+++|+++|+.|++|+++|++|++++++.|.++|
T Consensus      1033 V~S~GL~~sI~LLF~~LlflissI~l~kwrL~R~lGivlLvlYvvFLV~aiLiE~~ii 1090 (1096)
T TIGR00927      1033 VSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVMLEDRII 1090 (1096)
T ss_pred             ecCccHHHHHHHHHHHHHHHHHHHHhcceEEechHHHHHHHHHHHHHHHHHHHhcceE
Confidence            8888888888888888887777777899999999999999999999999999999999

>PLN03151 cation/calcium exchanger; Provisional

Probab=99.96  E-value=6.2e-29  Score=247.63  Aligned_cols=174  Identities=21%  Similarity=0.270  Sum_probs=149.1

Q ss_pred             eeecCCCcccc--ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHH
Q psy6733          63 AGREGPKKFRD--CTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALS  140 (257)
Q Consensus        63 ~~~~~~~~~~~--~~~~~F~~si~WI~~~s~~vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~  140 (257)
                      +-.|+||++|.  |..++|++|++||+..++| +++++..            +|..+|+|++++|+|++|||||+||+++
T Consensus       471 tr~d~PP~~~~~~~~~~~f~~Si~wi~~~a~e-lv~~l~~------------iG~i~~is~~~lglTvlA~gnsi~Dlia  537 (650)
T PLN03151        471 TEPDRPPRRFLIPWVLGGFIMSIVWFYMIANE-LVALLVA------------FGVIFGINPSILGLTVLAWGNSMGDLMS  537 (650)
T ss_pred             cCCCCCChhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHH------------HHHHhCCCHHHHHHHHHHHHccHHHHHH
Confidence            33478898875  4556999999999999998 7777776            9999999999999999999999999999


Q ss_pred             HHHHHHhCCC--CcccccccchhhHHHHHhhhHhHHhHhhhccCCceeEec-cCchHHHHHHHHHHHHHHHHHHHhCCce
Q psy6733         141 SLAVVKEGYG--DMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVY-SKGLTYSTISLFSTVVFLISATHMNGWK  217 (257)
Q Consensus       141 si~aar~G~~--dmAvgniiGSnifnill~lGl~~li~~~~~~~~~~v~v~-~~~l~~~~l~l~~~ll~~~~~~~~~~~~  217 (257)
                      |++.||||++  .||+++++|||+||+++++|++++++....++++ ..+. .+.+.+...+++.+++..++.++.+||+
T Consensus       538 n~~lA~~G~~~m~mA~~a~~ggp~F~il~glG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~~~L~~~li~~~~~~f~  616 (650)
T PLN03151        538 NVALAMNGGDGVQIAMSGCYAGPMFNTLVGLGMSMLLGAWSKSPES-YMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMR  616 (650)
T ss_pred             HHHHHHcCCchhHHHHHHhhhhhHHHHHHhccHHHHHHHhhcCCCc-eeecCCChHHHHHHHHHHHHHHHHHHHHHhCee
Confidence            9999999987  4688899999999999999999999876544443 3333 2345666666777788877888899999


Q ss_pred             ecHHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q psy6733         218 LDRRYGAILMMWYFVFLIVGSLYELNVFGYMNP  250 (257)
Q Consensus       218 l~r~~GiiLl~lY~~fl~~~il~e~~vi~~~~~  250 (257)
                      ++|..|+.++.+|++|++++++.|.+++++++.
T Consensus       617 ~~R~~G~~li~~Y~~Fl~~~~~~~~~~~~~~~~  649 (650)
T PLN03151        617 PNKTLGVGLIALYLIFLTFRVSTAMGFIPWAGL  649 (650)
T ss_pred             echhHHHHHHHHHHHHHHHHHHHHhCccccCCC
Confidence            999999999999999999999999999998753

>KOG2399|consensus

Probab=99.93  E-value=5.7e-26  Score=223.83  Aligned_cols=181  Identities=27%  Similarity=0.402  Sum_probs=143.6

Q ss_pred             cccccceeeee-----eeeeecCCCccccc-cc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccCCCch
Q psy6733          50 PHYPYPATCSI-----HHAGREGPKKFRDC-TP-FTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDT  122 (257)
Q Consensus        50 ~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~-~~F~~si~WI~~~s~~vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~  122 (257)
                      ..|.+.++.++     +++-.++||++.+| +. .+|+||+.||+..+.| ++.+++.            +|..+|+|++
T Consensus       416 ~~~~l~is~~la~l~~~~t~~~~ppk~~~~v~~~~gF~mSi~wI~~~A~E-iv~vl~~------------lG~I~~ls~s  482 (605)
T KOG2399|consen  416 YLISLIISIPLAILAFFFTRLDKPPKFYHWVFSALGFLMSIAWIYLIANE-LVAVLTM------------LGVIFGLSPS  482 (605)
T ss_pred             HHHHHHHHHHHHHHHHHhCcccCCCchHhHHHHHHHHHHHHHHHHHHHHH-HHHHHHH------------HHHHhCCCHH
Confidence            44445544443     33444788865555 43 5999999999999999 6666666            9999999999


Q ss_pred             hhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhHHhHhhhccCCceeEeccCchHHHHHHHHH
Q psy6733         123 VMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFS  202 (257)
Q Consensus       123 v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~li~~~~~~~~~~v~v~~~~l~~~~l~l~~  202 (257)
                      ++|+|++|||||++|++++++.||||+++||+|+++|+++||+++++|++..++....++++.+.-..+.+.....++.+
T Consensus       483 iLGLTv~AWgNSiGDLIAniavak~G~p~MAmaac~GGplfn~lvg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~fL~i  562 (605)
T KOG2399|consen  483 ILGLTVLAWGNSIGDLIANIAVAKQGYPRMAMAACIGGPLFNLLVGLGLPLVISSLQGKPGNIVIPEDNSLRITLIFLLI  562 (605)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHcCcHHHHHHHHhhhHHHHHHHHhhHHHHHHHHhcCCCceecccCCceehhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999988766654322222333333345666


Q ss_pred             HHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHHHhhcc
Q psy6733         203 TVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELN  243 (257)
Q Consensus       203 ~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~il~e~~  243 (257)
                      +++..++.++.++++++|..|+.|+.+|++|..+..+.|..
T Consensus       563 ~l~~slv~~~~~~f~~~r~~gi~L~~lyi~f~~~~~ll~~~  603 (605)
T KOG2399|consen  563 GLLTSLVLIPTNRFRLRRVLGIGLLSLYIAFTLIFILLELG  603 (605)
T ss_pred             HHHHHHHHHhcccceeccchhhHHHHHHHHHHHHHHHHHHh
Confidence            77777777788999999999999999999996666666543

>TIGR00845 caca sodium/calcium exchanger 1

Probab=99.92  E-value=4.2e-25  Score=224.85  Aligned_cols=184  Identities=18%  Similarity=0.251  Sum_probs=145.4

Q ss_pred             ccccccceeeeeeeeeecCCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccCCCchhhhHHH
Q psy6733          49 QPHYPYPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTF  128 (257)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~si~WI~~~s~~vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTi  128 (257)
                      ..+|.+.+.|+..+++.++++.+++|  .+|++|++||+.+++ .+++.+..            +|+.+|+|++++|+|+
T Consensus       731 ~~~~~l~~~wk~lfa~vPP~~~~~g~--~~f~~sI~~Ig~l~~-~i~~~a~~------------ig~~~gi~~~viGlt~  795 (928)
T TIGR00845       731 YVMHFLTVFWKVLFAFVPPTEYWGGW--ACFVVSILMIGVLTA-FIGDLASH------------FGCTIGLKDSVTAVVF  795 (928)
T ss_pred             HHHHHHHhHHHhEEeecCChhHHHHH--HHHHHHHHHHHHHHH-HHHHHHHH------------HHHHcCCCHHhhhhee
Confidence            35566677778888877777778888  789999999999999 57777776            9999999999999999


Q ss_pred             HhhcCChhHHHHHHHHHHhCC-CCcccccccchhhHHHHHhhhHhHHhHhhhcc-CCceeEeccCchHHHHHHHHHHHHH
Q psy6733         129 VAAGVSVPDALSSLAVVKEGY-GDMAVSNAVGSNVFDILVCLGLPWFLQTAIIK-PGSHVNVYSKGLTYSTISLFSTVVF  206 (257)
Q Consensus       129 lA~GtSlPDli~si~aar~G~-~dmAvgniiGSnifnill~lGl~~li~~~~~~-~~~~v~v~~~~l~~~~l~l~~~ll~  206 (257)
                      +|+|||+||+++++.+|+||+ +|||+||++|||+||+++++|++|++++.... ++.++.+....+.+++.+++...++
T Consensus       796 vA~GTSlPEl~~S~~aA~~~~~~d~aigNv~GSNifNi~l~lGv~~~i~~~~~~~~~~~~~V~~~~l~~~v~l~~~~a~l  875 (928)
T TIGR00845       796 VALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAANGTQFKVSPGTLAFSVTLFTIFAFI  875 (928)
T ss_pred             eeEecCcHHHHHHHHHHHcCCCCceeEEeecchHHHHHHHHHHHHHHHhhhhhcccCceEEECccchhHHHHHHHHHHHH
Confidence            999999999999999999865 99999999999999999999999999976543 4567778777777776443332222


Q ss_pred             HHHHHHhCCc-----e------ecHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy6733         207 LISATHMNGW-----K------LDRRYGAILMMWYFVFLIVGSLYELNVFGY  247 (257)
Q Consensus       207 ~~~~~~~~~~-----~------l~r~~GiiLl~lY~~fl~~~il~e~~vi~~  247 (257)
                      ++..+..++.     +      ..+..+.+++.+|++|++++.+..+++|+.
T Consensus       876 ~~~vl~~rr~~~~g~elggp~~~~~~~~~~~~~lw~~y~~~s~l~ay~~i~g  927 (928)
T TIGR00845       876 CIGVLLYRRRPEIGGELGGPRTAKLLTSALFVLLWLLYILFSSLEAYCHIKG  927 (928)
T ss_pred             HHHHHHHhhcccccceeCCCCCcchhhhHHHHHHHHHHHHHHHHHHhcCccC
Confidence            2222222221     1      123467889999999999999999988753

This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family

>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger

Probab=99.89  E-value=7.3e-23  Score=206.85  Aligned_cols=140  Identities=24%  Similarity=0.319  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhH
Q psy6733          94 MVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW  173 (257)
Q Consensus        94 v~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~  173 (257)
                      +++++.++|+|||+++++.|++.+|+|+.++|+|++|+|||+||+++++.++++|+.|+++||++|||+||+++++|++.
T Consensus       467 ~Fv~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiAv~~g~sDIGVGNIVGSnIFNILLVLGl~a  546 (1096)
T TIGR00927       467 VFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCA  546 (1096)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHHHHcCCCcceehhhHhHHHHHHHHHHhhhe
Confidence            66788999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             HhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHHHhh
Q psy6733         174 FLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYE  241 (257)
Q Consensus       174 li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~il~e  241 (257)
                      ++.+..      ++++.+.+..++.+++.++.+++..  +.+++++|++|++|+++|++|+++....+
T Consensus       547 Lis~~~------l~Ld~~~L~RDllFyILAv~lLilf--~lDG~Itr~EgIILLlLYiiYVvvm~~n~  606 (1096)
T TIGR00927       547 LFSREI------LNLTWWPLFRDVSFYILDLMMLILF--FLDSLIAWWESLLLLLAYALYVFTMKWNK  606 (1096)
T ss_pred             eecccc------ccccccceehhHHHHHHHHHHHHHH--HhCCeEcHHHHHHHHHHHHHHHHHHHHhH
Confidence            765422      1222222223333322332222222  35789999999999999999998877654

>PRK10734 putative calcium/sodium:proton antiporter; Provisional

Probab=99.86  E-value=1.8e-21  Score=180.81  Aligned_cols=136  Identities=29%  Similarity=0.520  Sum_probs=107.1

Q ss_pred             HHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhHH
Q psy6733          95 VWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWF  174 (257)
Q Consensus        95 ~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~l  174 (257)
                      +......++++++++++.+++.+|+||.++|+|++|+|||+||+++++.++|||+.|+|+||++|||+||+++++|++++
T Consensus       182 g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslPE~~~sv~a~~~g~~~~avgniiGsnifni~~~lg~~~l  261 (325)
T PRK10734        182 ALIIMPMATRMVIDNATVLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPAL  261 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHHHHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHh
Confidence            34456689999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHH
Q psy6733         175 LQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGS  238 (257)
Q Consensus       175 i~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~i  238 (257)
                      +.+....+ +++   .++  +. .++..+++++.. ...+|+|++|++|..|+..|+.|+...+
T Consensus       262 ~~~~~v~~-~~~---~~~--~~-~~~~~~~~~~~~-~~~~~~~i~r~~G~~Ll~~Y~~y~~~l~  317 (325)
T PRK10734        262 ISPGEINP-LAF---SRD--YW-VMLLVSVIFALL-CWRRKRRIGRGAGALLLGGFIVWLAMLY  317 (325)
T ss_pred             hccccccc-hhH---HHH--HH-HHHHHHHHHHHH-HHHcCCccChHHHHHHHHHHHHHHHHHH
Confidence            86532211 111   111  11 122233322222 2236789999999999999999987665

>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

Probab=99.86  E-value=1.7e-21  Score=180.54  Aligned_cols=136  Identities=25%  Similarity=0.494  Sum_probs=110.6

Q ss_pred             HHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhH
Q psy6733          94 MVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW  173 (257)
Q Consensus        94 v~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~  173 (257)
                      .+......++|+++++.+.+++.+|+||.++|+|++|+|||+||+++++.++|||+.|+|+||++|||+||+++++|++.
T Consensus       182 ~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltivaigTSlPElv~si~a~rkg~~~iavGnviGSni~n~~~~lGi~~  261 (320)
T COG0530         182 IGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARKGEDDIAVGNVIGSNIFNILIVLGISA  261 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCCeEEeeecchHHHHHHHHHhHHH
Confidence            44456778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHhhhccCCceeEeccCchHHHHHH-HHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHH
Q psy6733         174 FLQTAIIKPGSHVNVYSKGLTYSTIS-LFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGS  238 (257)
Q Consensus       174 li~~~~~~~~~~v~v~~~~l~~~~l~-l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~i  238 (257)
                      ++.+....        ...+.++... +..++++.+.. ..+++|++|++|..++..|+.|..+.+
T Consensus       262 ~~~~~~~~--------~~~~~~~~~vmi~~~l~l~l~~-~~~~~~i~r~~g~~ll~~Y~~~~~~~~  318 (320)
T COG0530         262 LIGPITVE--------PSALLVDAPVLILVTLLLLLFL-ARRRRRIGRKEGLLLLGLYIVYVALLI  318 (320)
T ss_pred             hccccccC--------chhHHHHHHHHHHHHHHHHHHH-HhccCcchhHHHHHHHHHHHHHHHHHh
Confidence            88763221        2222333322 22333332221 358999999999999999999988765

>PRK10734 putative calcium/sodium:proton antiporter; Provisional

Probab=99.86  E-value=1.8e-21  Score=180.79  Aligned_cols=141  Identities=26%  Similarity=0.405  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHh
Q psy6733          93 IMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLP  172 (257)
Q Consensus        93 vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~  172 (257)
                      +++..+..+++|+++++++.+++++|+|+.++|+|++|+|||+||+++++.++++|++|+|+||++|||+||+++++|++
T Consensus         9 ~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia~GnilGSni~ni~lilg~~   88 (325)
T PRK10734          9 IIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILLILGLA   88 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHHH
Confidence            45666788899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHHHhhcc
Q psy6733         173 WFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELN  243 (257)
Q Consensus       173 ~li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~il~e~~  243 (257)
                      .++++...++.    ..+++..   .++..++++..   ...+++++|++|++++.+|++|+.+.+..+++
T Consensus        89 ~l~~~~~~~~~----~~~~~~~---~ll~~~~~~~~---~~~~~~l~~~~g~~ll~~~~~yl~~~~~~~~~  149 (325)
T PRK10734         89 ALIRPFTVHSD----VLRRELP---LMLLVSVLAGS---VLYDGQLSRSDGIFLLLLAVLWLLFIVKIARL  149 (325)
T ss_pred             HHhCCcccChH----HHHHHHH---HHHHHHHHHHH---HHHCCcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            98765432211    1122211   12222222211   13577899999999999999999998866653

>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein

Probab=99.85  E-value=5.9e-21  Score=175.97  Aligned_cols=140  Identities=29%  Similarity=0.402  Sum_probs=115.3

Q ss_pred             HHHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHh
Q psy6733          93 IMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLP  172 (257)
Q Consensus        93 vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~  172 (257)
                      ++++++...++|+++++++.+++++|+||.+.|+|++|+|||+||+++++.++++|++|+|+||++|||+||+++++|++
T Consensus         8 ~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la~g~ilGS~l~n~l~i~g~~   87 (307)
T TIGR00367         8 ILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIGVGNVIGSNIFNILLILGLS   87 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCeehhhhhhHHHHHHHHHHHHH
Confidence            46777889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHHHhhc
Q psy6733         173 WFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYEL  242 (257)
Q Consensus       173 ~li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~il~e~  242 (257)
                      .++++..        .+.+....+...++.+...+...  ..+++++|.+|++++..|++|+.+....|+
T Consensus        88 ~l~~~~~--------~~~~~~~~d~~~~l~~~~~~~~~--~~~g~i~~~~gi~ll~~Yv~yl~~~~~~~~  147 (307)
T TIGR00367        88 AIFSPII--------VDTDWLRRDFSFYLLVSILLLFF--GLDGPISRLDGVVLLFLYVVYLLFLVKVER  147 (307)
T ss_pred             Hhhccee--------echHHHHHHHHHHHHHHHHHHHH--HHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8876432        22222333332222222222222  346789999999999999999999998887

This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.

>PLN03151 cation/calcium exchanger; Provisional

Probab=99.84  E-value=1.8e-20  Score=187.17  Aligned_cols=151  Identities=18%  Similarity=0.270  Sum_probs=123.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHh-CCCCcccc
Q psy6733          77 FTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKE-GYGDMAVS  155 (257)
Q Consensus        77 ~~F~~si~WI~~~s~~vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~-G~~dmAvg  155 (257)
                      +.++...+|..     ++++++..+++|+|+++++.+++.+|+||.++|+|++|+|||.||+++++++..+ +.+|+++|
T Consensus       138 l~~~~l~~~l~-----~lF~~L~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig  212 (650)
T PLN03151        138 LGYAVLGVWLV-----ALFYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLN  212 (650)
T ss_pred             HHHHHHHHHHH-----HHHHHHHHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeee
Confidence            45555556665     4678899999999999999999999999999999999999999999999988664 78999999


Q ss_pred             cccchhhHHHHHhhhHhHHhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHH
Q psy6733         156 NAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLI  235 (257)
Q Consensus       156 niiGSnifnill~lGl~~li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~  235 (257)
                      +++||++||+++++|+..++.+     .++++++++...+++.+++.++.++.+.  ..++++++++|+.++.+|++|++
T Consensus       213 ~ilGs~lf~~~vV~G~v~l~~~-----~~pf~v~~~~f~RD~~F~lla~~~l~~~--l~~g~v~~~eai~ll~lY~~Yv~  285 (650)
T PLN03151        213 SVLGGAVFVTCVVVGIVSLCVA-----DKEVQIDKRCFIRDLCFFLFTLVSLLVI--LMVGKVTVGGAIAFVSIYVVYAF  285 (650)
T ss_pred             hhhhHHHHHHHHHHHHHHHhcc-----CCceeecchhHHHhHHHHHHHHHHHHHH--HHcCeEhHHHHHHHHHHHHHHHH
Confidence            9999999999999999987642     2346676666666665544444433322  45789999999999999999998


Q ss_pred             HHHH
Q psy6733         236 VGSL  239 (257)
Q Consensus       236 ~~il  239 (257)
                      +.+.
T Consensus       286 vv~~  289 (650)
T PLN03151        286 LVAA  289 (650)
T ss_pred             HHHh
Confidence            8764

>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein

Probab=99.83  E-value=2.1e-20  Score=172.32  Aligned_cols=127  Identities=30%  Similarity=0.553  Sum_probs=100.7

Q ss_pred             HHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhHHhH
Q psy6733          97 MITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQ  176 (257)
Q Consensus        97 ~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~li~  176 (257)
                      .....++++++++++.+++.+|+||.++|+|++|+|||+||+++++.++|+|+.|||+||++|||+||+++++|+++++.
T Consensus       180 ~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~PE~~~~i~a~~~g~~~~avg~~iGs~i~~~~~~~g~~~~~~  259 (307)
T TIGR00367       180 TGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLPELVVSVAAARKGLGDIAVGNVIGSNIFNILVGLGVPSLFY  259 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCchHHHHHhhhHHHHHHHHHHHHHHhc
Confidence            34456777888999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             hhhccCCceeEeccCchHHHHH-HHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHH
Q psy6733         177 TAIIKPGSHVNVYSKGLTYSTI-SLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVF  233 (257)
Q Consensus       177 ~~~~~~~~~v~v~~~~l~~~~l-~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~f  233 (257)
                      +...+        .....++.. +++.+++..+.  ..++++++|++|+.|+.+|++|
T Consensus       260 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~g~~l~~~Y~~y  307 (307)
T TIGR00367       260 PIPVE--------PLAYSLDAPVMVIVTLVLMLV--FKTSMKLGRWEGFLLLALYIAY  307 (307)
T ss_pred             ccccc--------hhHHHHHHHHHHHHHHHHHHH--HHhcCeehHHHHHHHHHHHHhC
Confidence            64222        112222221 12222222222  2358899999999999999876

This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.

>KOG1307|consensus

Probab=99.83  E-value=2.8e-21  Score=182.82  Aligned_cols=154  Identities=24%  Similarity=0.312  Sum_probs=128.1

Q ss_pred             CCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHH
Q psy6733          67 GPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVK  146 (257)
Q Consensus        67 ~~~~~~~~~~~~F~~si~WI~~~s~~vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar  146 (257)
                      .++|.+++..++.+..|       |  |+..+.++|+|+||++++.|.+++|||+.++|.|++|+|+|.||+++|+....
T Consensus        49 ~e~rr~G~VvlHv~g~i-------Y--mFvALAIVCDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVF  119 (588)
T KOG1307|consen   49 LEQRRQGAVVLHVIGLI-------Y--MFVALAIVCDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGVF  119 (588)
T ss_pred             HHHhhcCcEEeehhhHH-------H--HHHHHHHHhcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeEE
Confidence            45666777776654322       3  77778999999999999999999999999999999999999999999999998


Q ss_pred             hCCCCcccccccchhhHHHHHhhhHhHHhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHH
Q psy6733         147 EGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAIL  226 (257)
Q Consensus       147 ~G~~dmAvgniiGSnifnill~lGl~~li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiL  226 (257)
                      --++|.++|.++||.+||+|.++|.+.+++      ++..++..+.+.+++.+...+++.+++.  +.|-++.+|++++|
T Consensus       120 It~~dVGiGTIVGSAvFNIL~Vig~C~LFS------rqvl~LtWWPLfRD~sfY~lsl~~Li~F--f~D~~I~WwEaL~L  191 (588)
T KOG1307|consen  120 ITQGDVGIGTIVGSAVFNILCVIGVCGLFS------RQVLNLTWWPLFRDVSFYTLSLIMLIYF--FLDELIMWWEALAL  191 (588)
T ss_pred             EecCCcceeeeeehhhhhHHHHHHHHHhhc------ccccccccchhhhhhHHHHHHHHHHHHH--HHhhHHHHHHHHHH
Confidence            888999999999999999999999999876      3345677777777666555555544332  56889999999999


Q ss_pred             HHHHHHHHHHH
Q psy6733         227 MMWYFVFLIVG  237 (257)
Q Consensus       227 l~lY~~fl~~~  237 (257)
                      +.+|+.|+++.
T Consensus       192 ~~~Yi~Yv~~M  202 (588)
T KOG1307|consen  192 LLMYISYVVFM  202 (588)
T ss_pred             HHHHHHHheee
Confidence            99999998654

>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

Probab=99.83  E-value=9.5e-20  Score=168.92  Aligned_cols=145  Identities=26%  Similarity=0.416  Sum_probs=121.1

Q ss_pred             HHHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHh
Q psy6733          93 IMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLP  172 (257)
Q Consensus        93 vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~  172 (257)
                      +.+..+.+.++|+++++++.+++++|+|+.+.|+|++|+|||+||+.++..++.+|++|+|+||++|||++|+++++|+.
T Consensus        16 i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~iavGnvlGSni~ni~li~gl~   95 (320)
T COG0530          16 IAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIAVGNVLGSNIFNILLILGLA   95 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCeeeehhhhHHHHHHHHHHHHH
Confidence            57778899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy6733         173 WFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGY  247 (257)
Q Consensus       173 ~li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~il~e~~vi~~  247 (257)
                      .++++...+++    ..+++..+   +++++.... .  ...+++++|.+|+.++..|++|+.+....+++.-..
T Consensus        96 ali~~~~~~~~----~~~r~~~f---~ll~~~~~~-~--~~~~~~~~~~~gi~ll~l~~~yl~~~~~~~~~~~~~  160 (320)
T COG0530          96 ALIAPLKVDSD----VLRREIPF---LLLATLILL-L--VLLDGHLSRLDGIVLLLLYVLYLYYLLKLSREAEEP  160 (320)
T ss_pred             HHHhhhHhhhh----HHHHhhHH---HHHHHHHHH-H--HHHcCCccHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence            99988755432    11222222   222222222 2  235889999999999999999999999988876653

>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins

Probab=99.82  E-value=9.6e-21  Score=153.28  Aligned_cols=135  Identities=24%  Similarity=0.481  Sum_probs=98.3

Q ss_pred             HHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhHHhHhh
Q psy6733          99 TIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTA  178 (257)
Q Consensus        99 ~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~li~~~  178 (257)
                      ...+++++++++|.+++++|+|+.++|+|++|++||+||+++++.++++|++|+|+|+++|||++|++++.|++++++..
T Consensus         3 i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~~~~   82 (140)
T PF01699_consen    3 IIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLAIGNIIGSNIFNITLIVGLILLFGPI   82 (140)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTHHHHHHHHS-B
T ss_pred             ehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchhhhcccchHHHHHHHHHHHHHHhccc
Confidence            44678889999999999999999999999999999999999999999999999999999999999999999999998765


Q ss_pred             hccCCceeEeccCchHHHHHHHHHHHHHHHHHHHh---CCceecHHHHHHHHHHHHHHHHHH
Q psy6733         179 IIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHM---NGWKLDRRYGAILMMWYFVFLIVG  237 (257)
Q Consensus       179 ~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~---~~~~l~r~~GiiLl~lY~~fl~~~  237 (257)
                      ..++   .+.+......+..++........ ....   ++++.+|++|++++.+|++|++++
T Consensus        83 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~~  140 (140)
T PF01699_consen   83 KLGS---QTIDWSSFTRDFSFLLLAILLLI-LFFLAFIRDGRISRFEGLVLLILYILYLVFT  140 (140)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHH-HCCT---HCT-BSHHHHHHHHHHHHHHHHH-
T ss_pred             cccc---cccccchHHHHHHHHHHHHHHHH-HHHHHHHcCCeEhHHHHHHHHHHHHHHHhcC
Confidence            3222   11222222222222222211111 1111   389999999999999999999763

This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.

>TIGR00846 caca2 calcium/proton exchanger

Probab=99.80  E-value=3.2e-19  Score=168.14  Aligned_cols=136  Identities=13%  Similarity=0.182  Sum_probs=109.9

Q ss_pred             HHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhH
Q psy6733          94 MVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW  173 (257)
Q Consensus        94 v~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~  173 (257)
                      .+..+...++|+++++++.+++.+|+|+.++|+|++|+|||+||+++++.++|+|+.|+++||++|||+||+++++|+..
T Consensus       228 ~~~~~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~g~~~lavg~~iGSni~n~l~vl~~~~  307 (365)
T TIGR00846       228 GATIVVALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALGSALQIALFVVPVVV  307 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            45566788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHH
Q psy6733         174 FLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIV  236 (257)
Q Consensus       174 li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~  236 (257)
                      ++++..   +.+++...+.  ++..+++.++++....  ..|+|++|++|..++.+|++|...
T Consensus       308 li~~~~---~~~~~l~~~~--~~~~~l~~s~~~~~~~--~~~~~~~~~eG~~ll~~Y~~~~~~  363 (365)
T TIGR00846       308 LVAWML---GIPMDLNFGA--PETVALALSVFLTTIT--LQDGRSNYLEGAVLLALYIIIAML  363 (365)
T ss_pred             HHHHhc---CCceeccCcH--HHHHHHHHHHHHHHHH--HcCCcCcHHHHHHHHHHHHHHHHH
Confidence            987542   2223332222  2223333333332222  368899999999999999999763

This model is generated from the calcium ion/proton exchangers of the CacA family.

>KOG1306|consensus

Probab=99.79  E-value=6.7e-20  Score=174.51  Aligned_cols=177  Identities=20%  Similarity=0.279  Sum_probs=142.2

Q ss_pred             cceeeeeeeeeecCCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcC
Q psy6733          54 YPATCSIHHAGREGPKKFRDCTPFTFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGV  133 (257)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~si~WI~~~s~~vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~Gt  133 (257)
                      +.+-|++.|++.|+++.+|+|  ..|+.|++.|+.++. +++.+...            +|+..|+.|++..+|++|+||
T Consensus       408 l~~~WK~lFAfvPPt~~~~Gw--~cFvvsi~~Igl~ta-~igd~as~------------fgC~vglkdsVtA~~~vA~GT  472 (596)
T KOG1306|consen  408 LTVPWKVLFAFVPPTEICHGW--ACFVVSILFIGLLTA-VIGDLASH------------FGCTVGLKDSVTAVTFVALGT  472 (596)
T ss_pred             HHHHHHHHeeeCCchhhcCcc--HHHHHHHHHHHHHHH-HHHHHHHh------------hceeecCccceeeeeeehhcC
Confidence            567799999999999999999  578999999998888 57666665            999999999999999999999


Q ss_pred             ChhHHHHHHHHHH-hCCCCcccccccchhhHHHHHhhhHhHHhHhhhc-cCCceeEeccCchHHHHHHHHHHHHHHHHHH
Q psy6733         134 SVPDALSSLAVVK-EGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAII-KPGSHVNVYSKGLTYSTISLFSTVVFLISAT  211 (257)
Q Consensus       134 SlPDli~si~aar-~G~~dmAvgniiGSnifnill~lGl~~li~~~~~-~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~  211 (257)
                      |+||.++|-++|. +..+|-++||+-|||-.|+++|+|++|.+...+. .+|+++.++..++.|++.++.+..+..+..+
T Consensus       473 S~PDtfASkiAA~~d~~AD~~igNvTgSNaVNvflGiG~aW~iaavy~a~~g~~f~v~~g~l~FsvtlF~i~s~~~i~vl  552 (596)
T KOG1306|consen  473 SVPDTFASKIAAEQDQTADASIGNVTGSNAVNVFLGIGLAWSIAAVYWAAQGEPFYVEAGTLAFSVTLFTIFSVVCIVVL  552 (596)
T ss_pred             CCcHHHHHHHHHhhcccccccccceecccceeEEEeccHHHHHHHHHHHhcCceEEeccceeeeehHHHHHHHHHhheee
Confidence            9999999988875 4578999999999999999999999999988764 4678899988888888754433322222222


Q ss_pred             HhCCc---------eecH-HHHHHHHHHHHHHHHHHHHhhcccc
Q psy6733         212 HMNGW---------KLDR-RYGAILMMWYFVFLIVGSLYELNVF  245 (257)
Q Consensus       212 ~~~~~---------~l~r-~~GiiLl~lY~~fl~~~il~e~~vi  245 (257)
                      .++|.         +..| ..+.+++.+|++|++++.+..++++
T Consensus       553 ~~RR~~iggELGGP~~~k~~ta~~fv~lW~~yv~~s~leay~~i  596 (596)
T KOG1306|consen  553 VYRRPHIGGELGGPRGWKLLTAALFVSLWLLYVLLSSLEAYCVI  596 (596)
T ss_pred             EEeccccCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            22321         2223 3567888999999999988877654

>TIGR00378 cax calcium/proton exchanger (cax)

Probab=99.71  E-value=8.4e-17  Score=150.91  Aligned_cols=135  Identities=15%  Similarity=0.191  Sum_probs=109.3

Q ss_pred             HHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhH
Q psy6733          94 MVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW  173 (257)
Q Consensus        94 v~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~  173 (257)
                      .+......++|+++++.+.+++.+|+|+.+.|+|++|++||+||.++++.+|+||+.|++++|++|||++|.+++.++..
T Consensus       212 ~~~v~i~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~~~~~~~ai~~~~GS~i~~~l~v~p~lv  291 (349)
T TIGR00378       212 GTTVIVAFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAMKDKMDLALGVAIGSSLQIALFVAPVLV  291 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcccHHHHHHhHHHHHHHHHHHHHH
Confidence            44556778999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             HhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHH
Q psy6733         174 FLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLI  235 (257)
Q Consensus       174 li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~  235 (257)
                      +++...   ++++++..+  .++...++.+++.....  ..|+|.+|.+|..++..|+++-+
T Consensus       292 l~~~~~---~~~~~L~f~--~~~~~~l~~~v~~~~~~--~~dg~~n~leG~~ll~~Y~i~~~  346 (349)
T TIGR00378       292 IVGWMI---DVPMTLNFS--TFELVALFIAVLLSNYI--SLDGESNWLEGVMLLAMYIIIAM  346 (349)
T ss_pred             HHHHHh---CCCceecCc--HHHHHHHHHHHHHHHHH--HhCCCCcHHHHHHHHHHHHHHHH
Confidence            776432   234444333  24443444444333222  57999999999999999998754

>TIGR00846 caca2 calcium/proton exchanger

Probab=99.69  E-value=5.9e-17  Score=152.81  Aligned_cols=148  Identities=17%  Similarity=0.196  Sum_probs=109.1

Q ss_pred             HHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhH
Q psy6733          94 MVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW  173 (257)
Q Consensus        94 v~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~  173 (257)
                      ++.++.+.++|+++++++.+++++|++   .|.+++|.|||.||+++++.++.+|++|+++||++|||++|+++++|++.
T Consensus        42 ~~~~~li~~a~~lv~~a~~lA~~~G~~---vG~ll~a~~ts~pEL~vsi~A~~~g~~~la~gnivGS~i~NilLIlGl~~  118 (365)
T TIGR00846        42 LNLLGIIPLAERVSFATEQLAHRLGPT---LGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLGLSL  118 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCc---hhhHHHHHHhHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344457789999999999999999987   56667799999999999999999999999999999999999999999999


Q ss_pred             HhHhhhccCCceeEeccCchHH-HHHHHHHHHHHHHHHH--HhCCc-----eecHHHHHHHHHHHHHHHHHHHHhhcccc
Q psy6733         174 FLQTAIIKPGSHVNVYSKGLTY-STISLFSTVVFLISAT--HMNGW-----KLDRRYGAILMMWYFVFLIVGSLYELNVF  245 (257)
Q Consensus       174 li~~~~~~~~~~v~v~~~~l~~-~~l~l~~~ll~~~~~~--~~~~~-----~l~r~~GiiLl~lY~~fl~~~il~e~~vi  245 (257)
                      ++++...++++.  ++++.... ..++.++++.+.+...  ...++     .++|.+|++++.+|++|+.+.+..+++.+
T Consensus       119 l~~~~~~~~~~~--~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~~~~~~~ls~~~giill~ly~~yl~~~~~~~~~~f  196 (365)
T TIGR00846       119 FLGGIKNIREQR--FNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDSILGLSRGIAIVMLILYGAFLVFQLVTHRQLF  196 (365)
T ss_pred             HHhccCccceee--ccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccchhcc
Confidence            998775422111  22222111 1112222211111111  01232     48899999999999999999998887765


Q ss_pred             c
Q psy6733         246 G  246 (257)
Q Consensus       246 ~  246 (257)
                      +
T Consensus       197 ~  197 (365)
T TIGR00846       197 E  197 (365)
T ss_pred             c
Confidence            4

This model is generated from the calcium ion/proton exchangers of the CacA family.

>TIGR00378 cax calcium/proton exchanger (cax)

Probab=99.69  E-value=1.2e-16  Score=149.91  Aligned_cols=143  Identities=20%  Similarity=0.245  Sum_probs=107.0

Q ss_pred             HHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhHHhHhh
Q psy6733          99 TIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTA  178 (257)
Q Consensus        99 ~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~li~~~  178 (257)
                      .+-.+++++++.+.+++++|  +.+.|+|+.++|| +||+++++.++++|+.|+++||++|||++|+++++|++.++++.
T Consensus        29 iipla~~l~~~~~~lA~~~g--~~vggl~~~~~gt-~pEL~vsi~A~~~g~~~i~~gnivGS~i~NllLilGls~liggl  105 (349)
T TIGR00378        29 IIPLAAIMGNATEELADKAG--PTIGGLLNATFGN-AVELIVSIIALKEGLVRIVQASLTGSLLGNLLLVLGLCFFFGGL  105 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHcC--chHHHHHHHhhcc-HHHHHHHHHHHHcCChhhhHHHHHHHHHHhHHHHHHHHHHHhcc
Confidence            34557788999999999999  8999999999999 99999999999999999999999999999999999999999887


Q ss_pred             hccCCceeEeccCchHHHHHHHHHHHHHHHHHHH---h---CCc---eecHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy6733         179 IIKPGSHVNVYSKGLTYSTISLFSTVVFLISATH---M---NGW---KLDRRYGAILMMWYFVFLIVGSLYELNVFG  246 (257)
Q Consensus       179 ~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~---~---~~~---~l~r~~GiiLl~lY~~fl~~~il~e~~vi~  246 (257)
                      ..+++ .++.+..... ..+++++++.+.+....   .   .+.   .++|.+|++++.+|++|+.+...++++.++
T Consensus       106 ~~~~q-~~~~~~a~~~-~~ll~la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~aiill~lY~~~L~~~l~~h~~~f~  180 (349)
T TIGR00378       106 NYKQQ-TFNQTAARTN-SSLLAIACVALLIPAARATLSHGKEDGKILNLSRGTSIVIIIVYVLFLYFQLGTHHALYE  180 (349)
T ss_pred             cccee-ecCHHHHHHH-HHHHHHHHHHHHhhhHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhC
Confidence            54332 2222111111 11222222222221110   0   122   588999999999999999999988877554

>TIGR00845 caca sodium/calcium exchanger 1

Probab=99.42  E-value=2.4e-13  Score=139.48  Aligned_cols=146  Identities=21%  Similarity=0.314  Sum_probs=111.2

Q ss_pred             HHHHHHHHHHhhhhhcccccccc-----------------cCC-CchhhhHHHHhhcCChhHHHHHHHHHHhC---CCCc
Q psy6733          94 MVWMITIVCYRYLIVSSIVPGST-----------------LGI-PDTVMGLTFVAAGVSVPDALSSLAVVKEG---YGDM  152 (257)
Q Consensus        94 v~~~l~~~~a~~lv~~~~~ig~~-----------------lgI-s~~v~GlTilA~GtSlPDli~si~aar~G---~~dm  152 (257)
                      ++..+.+++++++ ++++.|...                 +++ |+++.|+|++|+|||.||+++++++...+   .+|+
T Consensus        85 ~F~~~~i~ad~f~-~sie~i~~~~~~v~~~~~~ge~~~~~~ri~~~tvag~t~~A~gssaPe~~~s~~~~~~~~~~~g~l  163 (928)
T TIGR00845        85 MFLGVSIIADRFM-ASIEVITSQEKEITIKKPNGETTVTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFEAGDL  163 (928)
T ss_pred             HHHHHHHHHHHHH-HHHHHHhhccceeeeecCCCcceeeEeeeCCcccccceeeeccCCchHHHHHHHHHhccCCccccc
Confidence            6777888888875 999999884                 444 99999999999999999999999987654   4699


Q ss_pred             ccccccchhhHHHHHhhhHhHHhHhhhccCCceeEec-----cCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHH
Q psy6733         153 AVSNAVGSNVFDILVCLGLPWFLQTAIIKPGSHVNVY-----SKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILM  227 (257)
Q Consensus       153 AvgniiGSnifnill~lGl~~li~~~~~~~~~~v~v~-----~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl  227 (257)
                      ++|.++||.+||++++.|++.+.-|    .|+.-++.     --+-.+|++..   +-++++......+.+.-|+|++-+
T Consensus       164 g~gtivGsa~Fn~~vi~~~~~~~~p----~g~~~~i~~l~Vf~vTa~wSifAY---iWl~lil~v~sp~vv~vwE~~lTl  236 (928)
T TIGR00845       164 GPSTIVGSAAFNMFIIIAICVYVIP----DGETRKIKHLRVFFVTAAWSVFAY---VWLYLILAVFSPGVVEVWEGLLTF  236 (928)
T ss_pred             cccceehhHHHHHHhhheeEEEecc----CccceeeeeeeEEEEeeeHHHHHH---HHHHhhheeeCCcHHHHHHHHHHH
Confidence            9999999999999999999876533    23322222     11223343322   222222223467789999999999


Q ss_pred             HHHHHHHHHHHHhhcccccc
Q psy6733         228 MWYFVFLIVGSLYELNVFGY  247 (257)
Q Consensus       228 ~lY~~fl~~~il~e~~vi~~  247 (257)
                      .+|.+.++.++..+++.+.+
T Consensus       237 ~ffp~~V~~A~~aD~~l~~~  256 (928)
T TIGR00845       237 FFFPLCVVFAWVADRRLLFY  256 (928)
T ss_pred             HHHHHHHHHHHHHhcchhhh
Confidence            99999999999999998863

This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family

>KOG2399|consensus

Probab=99.30  E-value=1.7e-12  Score=128.71  Aligned_cols=138  Identities=22%  Similarity=0.393  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHh-CCCCcccccccchhhHHHHHhhhH
Q psy6733          93 IMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKE-GYGDMAVSNAVGSNVFDILVCLGL  171 (257)
Q Consensus        93 vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~-G~~dmAvgniiGSnifnill~lGl  171 (257)
                      .+++++...++|||.++++.+++.+++||+++|+|++|+||+.||+++++++.+. ..+|+|+++++|+.+|.+.++.|+
T Consensus       113 ~lf~~l~~~a~~yFspsL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~~~~~~~~lg~alFVt~~V~G~  192 (605)
T KOG2399|consen  113 FLFYLLGITADDYFSPSLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKGDLALNDLLGGALFVTTVVVGL  192 (605)
T ss_pred             HHHHHHHHHHHHhcChHHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCcccHHHHHhccceeEEeeEeee
Confidence            4678889999999999999999999999999999999999999999999998764 345899999999999999999999


Q ss_pred             hHHhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHHH
Q psy6733         172 PWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSL  239 (257)
Q Consensus       172 ~~li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~il  239 (257)
                      ..+.++        ++++.....++..+++.++.++.+.. ....++..|.+..++..|..|+.....
T Consensus       193 i~~t~p--------Fki~~~~~iRDi~Fll~al~~l~~~~-~~~~~v~~~~~l~fl~~y~~Yv~~vi~  251 (605)
T KOG2399|consen  193 IILTKP--------FKINANSFIRDILFLLLALLFLAFIL-LRGNKVEIWMALTFLGIYVVYVVTVIV  251 (605)
T ss_pred             eeeecc--------eeeccchhHHHHHHHHHHHHHHHHHH-hcCCceeHHhHHHHhHHHHHHHHHHHH
Confidence            887765        34444444556555555555443332 233399999999999999999987775

>PRK10599 calcium/sodium:proton antiporter; Provisional

Probab=99.12  E-value=4.7e-10  Score=105.80  Aligned_cols=137  Identities=12%  Similarity=0.111  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhH
Q psy6733          94 MVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW  173 (257)
Q Consensus        94 v~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~  173 (257)
                      +........+|+++++.|...+.+|+|+.+.|+.+..+|| .||-++++.+|||++-|.+++-++||.+.-+++..+...
T Consensus       229 v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvIIaiv~~-apE~~tAV~aA~kNkmq~slnialGSsLq~illtvP~lv  307 (366)
T PRK10599        229 IHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLVALLIL-SPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVT  307 (366)
T ss_pred             HHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHHHHHHc-chhHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444556669999999999999999999999998754455 699999999999999999999999999999999999888


Q ss_pred             HhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHH
Q psy6733         174 FLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGS  238 (257)
Q Consensus       174 li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~i  238 (257)
                      +++-..   |+++++.-+.  +...+++.+++...+  .++++|-++.+|..++.+|..|+...+
T Consensus       308 lig~~~---g~pm~L~f~~--~e~vlL~ltv~v~~~--t~~dGrsN~LeG~~hL~lf~~y~~l~~  365 (366)
T PRK10599        308 LIAFLT---GNELQFGLGA--PEMVVMVASLVLCHI--SFSTGRTNVLNGAAHLALFAAYLMTIF  365 (366)
T ss_pred             HHHHHh---CCCeEecCCH--HHHHHHHHHHHHHHh--ccCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            877543   4456665443  444455555544333  258999999999999999999998764

>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]

Probab=99.03  E-value=3.3e-09  Score=99.54  Aligned_cols=137  Identities=16%  Similarity=0.200  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhH
Q psy6733          94 MVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW  173 (257)
Q Consensus        94 v~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~  173 (257)
                      +..++....+|+++.++|..-+.+|.|+.++|+++.++-...||.++++.+|++|+-|.+++-..||.+.-.++..+.-.
T Consensus       228 ~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~mqls~nia~Gsalq~~lltiP~lv  307 (368)
T COG0387         228 IATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRMQLSMNIAMGSALQTALLTIPVLV  307 (368)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55566777899999999999999999999999999999866799999999999999999999999999999998888776


Q ss_pred             HhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHH
Q psy6733         174 FLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVG  237 (257)
Q Consensus       174 li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~  237 (257)
                      +++-+.   ++++.+.-.  ......++++++...+.  .+++|-++.+|..++.+|.+|....
T Consensus       308 lis~~~---gqpm~l~~~--~~elV~l~~~v~~~~~~--~sdG~sn~leG~~lL~lya~~~~~f  364 (368)
T COG0387         308 LISLFT---GQPLTLGFG--PPELVLLVVTVFLANIL--FSDGRTNWLEGVVLLALYAIYAMLF  364 (368)
T ss_pred             HHHHHh---CCCccccCC--HHHHHHHHHHHHHHHHh--cCCCchHHHHHHHHHHHHHHHHHHH
Confidence            665332   344444333  34445555555544333  6899999999999999999998654

>KOG1397|consensus

Probab=98.83  E-value=1.2e-08  Score=95.98  Aligned_cols=144  Identities=15%  Similarity=0.194  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccc
Q psy6733          78 TFASVCSGISVYSLLIMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNA  157 (257)
Q Consensus        78 ~F~~si~WI~~~s~~vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgni  157 (257)
                      ++--|+.|+.      +..++....+||+|+..+...+.+|+|+.++|++++++-.+..|-+.++.-|.+|+-|+++|-.
T Consensus       287 s~~ss~~~L~------~~T~~vsllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kldLslgVa  360 (441)
T KOG1397|consen  287 SRWSSIIWLL------IMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLSLGVA  360 (441)
T ss_pred             hHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeecCcccchhhhh
Confidence            5557778886      3444566789999999999999999999999999999966677999999999999999999999


Q ss_pred             cchhhHHHHHhhhHhHHhHhhhccCCceeEeccCchHHHHHHHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHH
Q psy6733         158 VGSNVFDILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFL  234 (257)
Q Consensus       158 iGSnifnill~lGl~~li~~~~~~~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl  234 (257)
                      +||.+..-++..+...++.- ..  |.+++++-..  +....++++++++-..  .++++-++..|.+++..|++-.
T Consensus       361 igsalQI~Lf~vP~~v~v~W-~~--g~~M~LnF~~--~et~~l~isVfl~~y~--lqdG~Sny~kG~mLll~Y~Iia  430 (441)
T KOG1397|consen  361 IGSALQIALFVVPFSVIVGW-IM--GISMDLNFPL--LETACLFISVFLVAYL--LQDGKSNYFKGLMLLLCYLIIA  430 (441)
T ss_pred             hhhhHhHHHhhhhHHHHhhh-hc--CCceEEeccH--HHHHHHHHHHHHHHHH--HhcCchhHHHHHHHHHHHHHHH
Confidence            99999999999987766542 22  3344444332  3344445555543332  5799999999999999998654

>KOG1397|consensus

Probab=98.67  E-value=2.1e-07  Score=87.68  Aligned_cols=135  Identities=19%  Similarity=0.284  Sum_probs=97.0

Q ss_pred             HhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhHHhHhhhccC
Q psy6733         103 YRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIKP  182 (257)
Q Consensus       103 a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~li~~~~~~~  182 (257)
                      |+++..+.|.++...|  +++-|+.--.+||.+ |++.++.|-+||+.++.-++.+||.+-|+++++|++.+...+. ++
T Consensus       110 A~~l~~ateqls~~tg--~tvGgllNAtfGnai-Elii~ilALk~g~~riVq~SlLGSILsnlLLvlG~s~~~Ggi~-rk  185 (441)
T KOG1397|consen  110 AERLGFATEQLSAYTG--PTVGGLLNATFGNAI-ELIIYILALKNGKVRIVQGSLLGSILSNLLLVLGLSLFCGGIR-RK  185 (441)
T ss_pred             HHHHHHHHHHHHhhcC--CcHHHHHhhhhccHH-HHHHHHHHhhcCceEEEehhhHHHHHHHHHHHhhHHHhhcccc-cc
Confidence            4455566667998888  888888887888877 9999999999999999999999999999999999998887654 33


Q ss_pred             CceeEeccCchHHHHHHHHHHHHHHHHHH---HhCC-----------ceecHHHHHHHHHHHHHHHHHHHHhhc
Q psy6733         183 GSHVNVYSKGLTYSTISLFSTVVFLISAT---HMNG-----------WKLDRRYGAILMMWYFVFLIVGSLYEL  242 (257)
Q Consensus       183 ~~~v~v~~~~l~~~~l~l~~~ll~~~~~~---~~~~-----------~~l~r~~GiiLl~lY~~fl~~~il~e~  242 (257)
                      .+.++....+.... +++++.+..++-.+   ...+           -.++|..+++|+..|++|+++.+.+++
T Consensus       186 ~Q~Fn~~~A~v~s~-lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~FqL~t~~  258 (441)
T KOG1397|consen  186 DQRFNIKSAGVNSA-LLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQLKTAR  258 (441)
T ss_pred             eeecccchhhHHHH-HHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHhhhccc
Confidence            33344333343322 22222222211111   0111           246899999999999999999999943

>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]

Probab=98.44  E-value=1.1e-06  Score=82.61  Aligned_cols=146  Identities=18%  Similarity=0.230  Sum_probs=105.9

Q ss_pred             HHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhHHhHhhhcc
Q psy6733         102 CYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIK  181 (257)
Q Consensus       102 ~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~li~~~~~~  181 (257)
                      .+.++.+++|.++.+.|  |.+-|+..-.+||.+ |++...++-++|++.++-++++||.+-|++++.|++.++..+..+
T Consensus        49 lA~~v~~aaE~lA~~vG--~~~G~Lina~f~~~i-Evil~~~al~~G~~~lvr~Si~gsIm~~~llv~GlslllGglr~~  125 (368)
T COG0387          49 LAFSVVRAAEVLAARVG--EPYGSLINALFGNAI-EVILIVAALKSGSPTLVRDSLYGSIMINLLLVVGLSLLLGGLRHK  125 (368)
T ss_pred             HHHHHHHHHHHHHHHhC--CchhHHHHHHHHHHH-HHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHcchhhc
Confidence            56677888899999988  776676666667665 999999999999999999999999999999999999999877543


Q ss_pred             CCceeEeccCchHHHHHHHHHHHHHHHHHHHhC-------CceecHHHHHHHHHHHHHHHHHHHHhhccccccCCCCC
Q psy6733         182 PGSHVNVYSKGLTYSTISLFSTVVFLISATHMN-------GWKLDRRYGAILMMWYFVFLIVGSLYELNVFGYMNPPE  252 (257)
Q Consensus       182 ~~~~v~v~~~~l~~~~l~l~~~ll~~~~~~~~~-------~~~l~r~~GiiLl~lY~~fl~~~il~e~~vi~~~~~~~  252 (257)
                      . ++++.+... .++.++.+.+.+.+++-..+.       .-..++..+++++.+|.+|+.++..+|.+.|...+..+
T Consensus       126 ~-Q~fN~~~a~-~~~~~L~~~~~ialv~P~~~~~~~~~~~~~~~s~~~avv~i~~Y~lfL~fql~tH~~~f~~~~~~e  201 (368)
T COG0387         126 T-QPFNPHGAG-TYLALLFTAATIALVLPTFFPYTGGGNFSLGQSLFVAVVLIALYGLFLFFQLKTHASLFWQVHEAE  201 (368)
T ss_pred             e-eecchhhHH-HHHHHHHHHHHHHhhhhhhhcccCCCcchHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccc
Confidence            3 334332222 233333333222222222122       12356778899999999999999999999997665543

>KOG1306|consensus

Probab=96.36  E-value=0.0026  Score=62.20  Aligned_cols=124  Identities=18%  Similarity=0.272  Sum_probs=82.7

Q ss_pred             CchhhhHHHHhhcCChhHHHHHHHHH-HhCC--CCcccccccchhhHHHHHhhhHhHHhHhh-hccCCceeEeccCchHH
Q psy6733         120 PDTVMGLTFVAAGVSVPDALSSLAVV-KEGY--GDMAVSNAVGSNVFDILVCLGLPWFLQTA-IIKPGSHVNVYSKGLTY  195 (257)
Q Consensus       120 s~~v~GlTilA~GtSlPDli~si~aa-r~G~--~dmAvgniiGSnifnill~lGl~~li~~~-~~~~~~~v~v~~~~l~~  195 (257)
                      ++++.-+|++|.|+|.||+..|++=. +++.  +|++-|.++||..||...+.+++..+-+- ..++-++..+..-...+
T Consensus        81 NeTVsnltLmAlGsSaPEIlLSiIe~~gn~f~agdLGPgTIVGSAAfnlF~iiAVCv~vip~Ge~rki~~lrVf~VtA~w  160 (596)
T KOG1306|consen   81 NETVSNLTLMALGSSAPEILLSIIEFCGNEFQAGDLGPGTIVGSAAFNLFEIIAVCVRVIPAGELRKIFHLRVFFVTADW  160 (596)
T ss_pred             chhhHHHHHhhcccCcchhhHHHHHHhcccccccCcCCceEechhhhhhhhheEEEEEEcCCcccccccCceEEEEEeeH
Confidence            58999999999999999999997665 4443  69999999999999999999988653221 01111111111111112


Q ss_pred             HHHHHHHHHHHH-HHHHHhCCceecHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy6733         196 STISLFSTVVFL-ISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELNVFGY  247 (257)
Q Consensus       196 ~~l~l~~~ll~~-~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~il~e~~vi~~  247 (257)
                      ++..   -.-++ ++++ ...+...-|++++-+..|.+-+..++..+.+..+.
T Consensus       161 s~fA---YiWLyliLsV-~sPnvv~vwEallT~~ffp~~vv~ayaad~r~~f~  209 (596)
T KOG1306|consen  161 SIFA---YIWLYLILSV-FSPNVVYVWEALLTLLFFPLVVVSAYAADKRALFY  209 (596)
T ss_pred             HHHH---HHHHhheeEe-ccCCeeEEeehhhhHhhhhhhhhHHHHHhhhhhee
Confidence            2211   11111 1222 35678889999999999999999998888776554

>PRK10599 calcium/sodium:proton antiporter; Provisional

Probab=95.72  E-value=0.045  Score=52.13  Aligned_cols=137  Identities=15%  Similarity=0.134  Sum_probs=86.7

Q ss_pred             hhhhhcccccccccCCCchhhhHHHHhhcCChhHHHH--HHHHHHhCCCCcccccccchhhHHHHHhhhHhHHhHhhhcc
Q psy6733         104 RYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALS--SLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAIIK  181 (257)
Q Consensus       104 ~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~--si~aar~G~~dmAvgniiGSnifnill~lGl~~li~~~~~~  181 (257)
                      --.++.+|.+++++|=|   .|-.++++.-.+=|...  ++...-++.+.+|--.++..-+..+--.+|++.++..++.+
T Consensus        55 ~~~v~hAe~lA~~~GeP---~GtliLtlsv~~iEv~li~~~Ml~g~~~~tlaRDtvfa~vMi~~nGilGl~ll~GGlr~~  131 (366)
T PRK10599         55 FSVVRHADVLAHRLGEP---YGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFSLLLGGRKFA  131 (366)
T ss_pred             HHHHHHHHHHHHHHCCC---hHHHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHhccHHHHHHHHhccccC
Confidence            34578899999999955   56667777665667332  22222335677887888888888888889999999887543


Q ss_pred             CCceeEeccCch-HHHHHHHHHHHHHHHHHHHhCCc----eecHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy6733         182 PGSHVNVYSKGL-TYSTISLFSTVVFLISATHMNGW----KLDRRYGAILMMWYFVFLIVGSLYELNVFG  246 (257)
Q Consensus       182 ~~~~v~v~~~~l-~~~~l~l~~~ll~~~~~~~~~~~----~l~r~~GiiLl~lY~~fl~~~il~e~~vi~  246 (257)
                      . ++++  .++- .+...++..+.+.+++--...+.    ...+..+++++.+|.+|+.++..+|++.|.
T Consensus       132 e-Q~fn--~~ga~~~~~~ll~La~l~LvlP~~~~~~~~s~~~s~~~avv~lvlY~~fL~fQl~tHr~~F~  198 (366)
T PRK10599        132 T-QYMN--LFGIKQYLIALFPLAIIVLVFPMALPGANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFV  198 (366)
T ss_pred             e-eecC--HHhHHHHHHHHHHHHHHHHhcCcccCCCccchhHHHHHHHHHHHHHHHHHHHhccchHHHhc
Confidence            3 2333  3322 22222222222222111111122    234678899999999999999999999996

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	257
3v5s_A	320	Structure Of SodiumCALCIUM EXCHANGER FROM METHANOCO		7e-06

>pdb|3V5S|A Chain A, Structure Of SodiumCALCIUM EXCHANGER FROM METHANOCOCCUS JANNASCHII Length = 320

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 116 TLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDI 165
            L I D V+G T VA G S+P+ + SLA  K   G M + N +GSN+ DI
Sbjct: 192 ALDISDKVIGFTLVAFGTSLPELMVSLAAAKRNLGGMVLGNVIGSNIADI 241

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	257
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	3e-18
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	4e-15

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320

 Score = 81.1 bits (201), Expect = 3e-18
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 14/132 (10%)

Query: 104 RYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVF 163
              +  +      L I D V+G T VA G S+P+ + SLA  K   G M + N +GSN+ 
Sbjct: 180 ELFVDGAKKIALALDISDKVIGFTLVAFGTSLPELMVSLAAAKRNLGGMVLGNVIGSNIA 239

Query: 164 DILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYG 223
           DI   L +      ++      +   +  +    + +  +++  + A      K+ R  G
Sbjct: 240 DIGGALAV-----GSLFMH---LPAENVQM---AVLVIMSLLLYLFAK---YSKIGRWQG 285

Query: 224 AILMMWYFVFLI 235
            + +  Y + + 
Sbjct: 286 ILFLALYIIAIA 297

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320

 Score = 72.6 bits (179), Expect = 4e-15
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 12/132 (9%)

Query: 105 YLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFD 164
           + ++ S        + + V+G T +A G S+P+ L+S          +++ NA+GS + +
Sbjct: 22  WFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICN 81

Query: 165 ILVCLGLPWFLQTAIIKPGSHVNVYSKGLTYSTISLFSTVVFLISATHMNGWKLDRRYGA 224
           I + LGL     +AII P   + V         + L   +   +              G 
Sbjct: 82  IGLVLGL-----SAIISP---IIVDKNLQKNILVYLLFVIFAAVIGID----GFSWIDGV 129

Query: 225 ILMMWYFVFLIV 236
           +L++ + ++L  
Sbjct: 130 VLLILFIIYLRW 141

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	257
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	99.86
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	99.83

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A*

Probab=99.86  E-value=5.4e-22  Score=182.64  Aligned_cols=138  Identities=18%  Similarity=0.272  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHh
Q psy6733          93 IMVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLP  172 (257)
Q Consensus        93 vv~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~  172 (257)
                      +.+..+...++|+++++++.+++++|+||.+.|+|++|+|||+||+++++.++++|++|+|+||++|||+||+++++|++
T Consensus        10 ~~g~~~l~~~a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~~g~~diaiGnivGSni~nillvlG~~   89 (320)
T 3v5u_A           10 LLGLILLYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICNIGLVLGLS   89 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHhCCCCceeeeeecchHHHHHHHHHHHH
Confidence            46777889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHhhhccCCceeEeccCchHHHHHH-HHHHHHHHHHHHHhCCceecHHHHHHHHHHHHHHHHHHHHhhcc
Q psy6733         173 WFLQTAIIKPGSHVNVYSKGLTYSTIS-LFSTVVFLISATHMNGWKLDRRYGAILMMWYFVFLIVGSLYELN  243 (257)
Q Consensus       173 ~li~~~~~~~~~~v~v~~~~l~~~~l~-l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~fl~~~il~e~~  243 (257)
                      .++++...         ++....+... ++.++++. . . ..++ ++|++|++|+..|+.|+.+.+..+.+
T Consensus        90 ~li~p~~v---------~~~~~~d~~~~l~~~~~l~-~-~-~~~g-is~~~g~~Ll~~Y~~yl~~~~~~~~~  148 (320)
T 3v5u_A           90 AIISPIIV---------DKNLQKNILVYLLFVIFAA-V-I-GIDG-FSWIDGVVLLILFIIYLRWTVKNGSA  148 (320)
T ss_dssp             HHHSCBCC---------CHHHHHHHHHHHHHHHHHH-H-H-TTTC-BCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred             HHHccccc---------cHHHHHHHHHHHHHHHHHH-H-H-HHcc-cHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99876432         1122233322 22222222 1 2 3455 99999999999999999999987764

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A*

Probab=99.83  E-value=4.4e-21  Score=176.60  Aligned_cols=131  Identities=22%  Similarity=0.314  Sum_probs=108.7

Q ss_pred             HHHHHHHHHHhhhhhcccccccccCCCchhhhHHHHhhcCChhHHHHHHHHHHhCCCCcccccccchhhHHHHHhhhHhH
Q psy6733          94 MVWMITIVCYRYLIVSSIVPGSTLGIPDTVMGLTFVAAGVSVPDALSSLAVVKEGYGDMAVSNAVGSNVFDILVCLGLPW  173 (257)
Q Consensus        94 v~~~l~~~~a~~lv~~~~~ig~~lgIs~~v~GlTilA~GtSlPDli~si~aar~G~~dmAvgniiGSnifnill~lGl~~  173 (257)
                      .+..+...++|+++++++.+++.+|+||.++|+|++|+|||+||+++++.++|||+.|+|+||++|||+||+++++|+++
T Consensus       170 ~~l~~l~~~a~~lv~~~~~ia~~~gis~~~iGltlva~gtslPE~~~sv~aa~~g~~~laig~iiGS~ifn~~~v~g~~~  249 (320)
T 3v5u_A          170 IGLIGVLVGAELFVDGAKKIALALDISDKVIGFTLVAFGTSLPELMVSLAAAKRNLGGMVLGNVIGSNIADIGGALAVGS  249 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHTHHHHHTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHhccccHHHHHHHhCCchHHHHHHHHHHHhccHHHHHHHHHHHcCCCcHHHHHHHhHHHHHHHHHHHHHH
Confidence            45566778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHhhhccCCceeEeccCchHHHHH-HHHHHHHHHHHHHHhCCceecHHHHHHHHHHHHH-HHHHHHH
Q psy6733         174 FLQTAIIKPGSHVNVYSKGLTYSTI-SLFSTVVFLISATHMNGWKLDRRYGAILMMWYFV-FLIVGSL  239 (257)
Q Consensus       174 li~~~~~~~~~~v~v~~~~l~~~~l-~l~~~ll~~~~~~~~~~~~l~r~~GiiLl~lY~~-fl~~~il  239 (257)
                      ++++..        ++    .++.. +++.+++...   ..+|+|++|++|++++..|++ |+.+.+.
T Consensus       250 li~p~~--------~~----~~d~~~~l~~~~ll~~---~~~~~~i~~~eG~~ll~~Y~~~y~~~~~~  302 (320)
T 3v5u_A          250 LFMHLP--------AE----NVQMAVLVIMSLLLYL---FAKYSKIGRWQGILFLALYIIAIASLRMG  302 (320)
T ss_dssp             HHSCBC--------CC----HHHHHHHHHHHHHHHH---HHHHSCBSHHHHHHHHHHHHHHHHHSCSS
T ss_pred             hhcccc--------ch----HHHHHHHHHHHHHHHH---HHhCCcCcHHHHHHHHHHHHHHHHHHHHH
Confidence            876431        22    23332 2233333322   246889999999999999999 9976553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00