Psyllid ID: psy6783
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1119 | 2.2.26 [Sep-21-2011] | |||||||
| Q9VXN4 | 665 | Probable arginine--tRNA l | yes | N/A | 0.378 | 0.637 | 0.515 | 1e-126 | |
| P37880 | 661 | Arginine--tRNA ligase, cy | yes | N/A | 0.360 | 0.609 | 0.531 | 1e-124 | |
| Q9D0I9 | 660 | Arginine--tRNA ligase, cy | yes | N/A | 0.361 | 0.612 | 0.531 | 1e-123 | |
| P54136 | 660 | Arginine--tRNA ligase, cy | yes | N/A | 0.369 | 0.625 | 0.522 | 1e-123 | |
| Q5RA20 | 660 | Arginine--tRNA ligase, cy | yes | N/A | 0.369 | 0.625 | 0.518 | 1e-122 | |
| Q6P1S4 | 660 | Arginine--tRNA ligase, cy | yes | N/A | 0.337 | 0.572 | 0.519 | 1e-121 | |
| P40329 | 660 | Arginine--tRNA ligase, cy | yes | N/A | 0.361 | 0.612 | 0.512 | 1e-121 | |
| A7YW98 | 660 | Arginine--tRNA ligase, cy | yes | N/A | 0.369 | 0.625 | 0.5 | 1e-120 | |
| Q5ZM11 | 661 | Arginine--tRNA ligase, cy | yes | N/A | 0.360 | 0.609 | 0.508 | 1e-120 | |
| Q19825 | 713 | Probable arginine--tRNA l | yes | N/A | 0.383 | 0.601 | 0.458 | 5e-99 |
| >sp|Q9VXN4|SYRC_DROME Probable arginine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster GN=Aats-arg PE=2 SV=1 | Back alignment and function desciption |
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Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/464 (51%), Positives = 311/464 (67%), Gaps = 40/464 (8%)
Query: 168 LISKAIAEEEKKQGISSSSSSQTKGTAKKMNVPVSDRMSVRDYLSDVFTHAVQVAFPELG 227
++ K+IAEE G S ++ S+ ++L VF A+ AFPE
Sbjct: 54 ILKKSIAEESTAAGGDVSKPKESS--------------SITEHLESVFRQAIASAFPEFR 99
Query: 228 DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNP 287
D +A N KFGD+QCN+AM L K K+KG K P DIA +EL +
Sbjct: 100 DTPVIIAPVNSTSA-KFGDYQCNNAMGLSKKLKEKGINKAPRDIA--------TELKGHC 150
Query: 288 SLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAK 347
+ +I+K+E+A GFVNVFLS+ YA + +++ NGV+PP + KK RVLVDFSSPNIAK
Sbjct: 151 PASPIIEKLEIAGAGFVNVFLSKDYASLALSNLLRNGVKPPEVIKK-RVLVDFSSPNIAK 209
Query: 348 EMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPP 407
+MHVGHLRSTIIG+++ RLLE+L HDV+R+NH+GDWGTQFGMLIAHL+D+FP+YL +SPP
Sbjct: 210 QMHVGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPP 269
Query: 408 IADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDR 467
I+DLQ FYKESKKRFDEDE FKKRAY VV+LQ+ P+ KAWE+IC+VSR++FQ IY+R
Sbjct: 270 ISDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYER 329
Query: 468 LNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGED-RGSIPMTIVKSDGGFT 526
L++++ ERGESFYQ M +V YL KGLLE+D+GR+IMW +D + IP+TIVKSDGGFT
Sbjct: 330 LDISVKERGESFYQSRMLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFT 389
Query: 527 YDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEESTIIGDTISRLLEYLGHDVVRL 586
YDTSD+AAIR R+EEE DWI+YV D GQ HF + ++ S +L L H R+
Sbjct: 390 YDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAA----ERSAILNPLSH---RV 442
Query: 587 NHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKR 630
+HV QFG+++ KF T+S L E KR
Sbjct: 443 DHV-----QFGVVLGEDGKKFK---TRSGDTVKLSDLLDEGMKR 478
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Forms part of a macromolecular complex that catalyzes the attachment of specific amino acids to cognate tRNAs during protein synthesis. Drosophila melanogaster (taxid: 7227) EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 9 |
| >sp|P37880|SYRC_CRIGR Arginine--tRNA ligase, cytoplasmic OS=Cricetulus griseus GN=RARS PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9D0I9|SYRC_MOUSE Arginine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Rars PE=2 SV=2 | Back alignment and function description |
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| >sp|P54136|SYRC_HUMAN Arginine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=RARS PE=1 SV=2 | Back alignment and function description |
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| >sp|Q5RA20|SYRC_PONAB Arginine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=RARS PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6P1S4|SYRC_XENTR Arginine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis GN=rars PE=2 SV=1 | Back alignment and function description |
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| >sp|P40329|SYRC_RAT Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Rars PE=1 SV=2 | Back alignment and function description |
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| >sp|A7YW98|SYRC_BOVIN Arginine--tRNA ligase, cytoplasmic OS=Bos taurus GN=RARS PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5ZM11|SYRC_CHICK Arginine--tRNA ligase, cytoplasmic OS=Gallus gallus GN=RARS PE=2 SV=1 | Back alignment and function description |
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| >sp|Q19825|SYRC_CAEEL Probable arginine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=rrt-1 PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1119 | ||||||
| 242009305 | 575 | Arginyl-tRNA synthetase, putative [Pedic | 0.349 | 0.68 | 0.583 | 1e-133 | |
| 157117728 | 671 | arginyl-tRNA synthetase [Aedes aegypti] | 0.381 | 0.636 | 0.540 | 1e-131 | |
| 350420346 | 674 | PREDICTED: arginyl-tRNA synthetase, cyto | 0.372 | 0.618 | 0.538 | 1e-130 | |
| 340712657 | 674 | PREDICTED: arginyl-tRNA synthetase, cyto | 0.423 | 0.703 | 0.490 | 1e-129 | |
| 383862219 | 675 | PREDICTED: arginine--tRNA ligase, cytopl | 0.365 | 0.605 | 0.541 | 1e-129 | |
| 380013212 | 674 | PREDICTED: LOW QUALITY PROTEIN: arginine | 0.380 | 0.632 | 0.516 | 1e-128 | |
| 91080725 | 671 | PREDICTED: similar to arginyl-tRNA synth | 0.372 | 0.621 | 0.534 | 1e-128 | |
| 66501636 | 674 | PREDICTED: arginyl-tRNA synthetase, cyto | 0.380 | 0.632 | 0.516 | 1e-128 | |
| 170028825 | 664 | arginyl-tRNA synthetase [Culex quinquefa | 0.360 | 0.606 | 0.557 | 1e-127 | |
| 194745067 | 666 | GF16459 [Drosophila ananassae] gi|190628 | 0.374 | 0.629 | 0.516 | 1e-126 |
| >gi|242009305|ref|XP_002425430.1| Arginyl-tRNA synthetase, putative [Pediculus humanus corporis] gi|212509247|gb|EEB12692.1| Arginyl-tRNA synthetase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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Score = 484 bits (1246), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/415 (58%), Positives = 298/415 (71%), Gaps = 24/415 (5%)
Query: 206 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEK 265
S+++ L +F A+Q AFPEL + +A++N KFGD+QCN AM + ++ K +G+K
Sbjct: 59 SIQNTLVSIFKEAIQRAFPELKNAPVVIAASNNS---KFGDYQCNSAMPIVQLLKSEGKK 115
Query: 266 KNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGV 325
NP ++A+ I S V+ +I+K+EVA GF+NV LSR ++ I+ NGV
Sbjct: 116 SNPREVAEKIKSCVSPH--------NLIEKLEVAGAGFINVTLSRTEGQNCLQFILKNGV 167
Query: 326 QPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGT 385
PP +N K RV+VDFSSPNIAKEMHVGHLRSTIIGD+IS LLE+LGHDVVR+NHVGDWGT
Sbjct: 168 LPPKVNAKCRVIVDFSSPNIAKEMHVGHLRSTIIGDSISNLLEFLGHDVVRVNHVGDWGT 227
Query: 386 QFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 445
QFGMLIAHL+DKFPDYLTKSPPI DLQAFYKESKKRFDEDE FKKRAY CVV LQ PD
Sbjct: 228 QFGMLIAHLEDKFPDYLTKSPPIQDLQAFYKESKKRFDEDEAFKKRAYNCVVQLQSHHPD 287
Query: 446 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 505
Y KAW +ICDVSR++FQKIY RL++ +TE+GESFYQ ME+LV LE K L D+GRKI
Sbjct: 288 YLKAWNLICDVSRKEFQKIYQRLDIRITEKGESFYQTRMEKLVKELEAKNFLVEDEGRKI 347
Query: 506 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEES 565
MWG D SIP TIVKSDGGFTYDTSDLA I+ RIEEEKADWI+YVTD GQ HF +L++
Sbjct: 348 MWG-DSSSIPFTIVKSDGGFTYDTSDLACIKYRIEEEKADWIIYVTDSGQSTHFDVLQKC 406
Query: 566 TIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADL 620
I L + VR++ VG FG+++ + KF ++ + DL
Sbjct: 407 AIKCGI-------LNPEKVRIDFVG-----FGVVLGEDKKKFKTRSGETVRLVDL 449
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Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157117728|ref|XP_001658908.1| arginyl-tRNA synthetase [Aedes aegypti] gi|108884575|gb|EAT48800.1| AAEL000199-PA [Aedes aegypti] | Back alignment and taxonomy information |
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| >gi|350420346|ref|XP_003492480.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|340712657|ref|XP_003394872.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|383862219|ref|XP_003706581.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|380013212|ref|XP_003690660.1| PREDICTED: LOW QUALITY PROTEIN: arginine--tRNA ligase, cytoplasmic-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|91080725|ref|XP_975392.1| PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum] gi|270005463|gb|EFA01911.1| hypothetical protein TcasGA2_TC007521 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|66501636|ref|XP_623301.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|170028825|ref|XP_001842295.1| arginyl-tRNA synthetase [Culex quinquefasciatus] gi|167877980|gb|EDS41363.1| arginyl-tRNA synthetase [Culex quinquefasciatus] | Back alignment and taxonomy information |
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| >gi|194745067|ref|XP_001955014.1| GF16459 [Drosophila ananassae] gi|190628051|gb|EDV43575.1| GF16459 [Drosophila ananassae] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1119 | ||||||
| ZFIN|ZDB-GENE-030131-9014 | 661 | rars "arginyl-tRNA synthetase" | 0.365 | 0.618 | 0.511 | 1.4e-174 | |
| UNIPROTKB|P54136 | 660 | RARS "Arginine--tRNA ligase, c | 0.369 | 0.625 | 0.522 | 7.5e-174 | |
| MGI|MGI:1914297 | 660 | Rars "arginyl-tRNA synthetase" | 0.383 | 0.65 | 0.519 | 1.1e-172 | |
| UNIPROTKB|E2QRR5 | 660 | RARS "Uncharacterized protein" | 0.368 | 0.624 | 0.510 | 1.8e-172 | |
| UNIPROTKB|Q5ZM11 | 661 | RARS "Arginine--tRNA ligase, c | 0.369 | 0.624 | 0.501 | 3.7e-172 | |
| FB|FBgn0027093 | 665 | Aats-arg "Arginyl-tRNA synthet | 0.357 | 0.601 | 0.544 | 4.7e-172 | |
| UNIPROTKB|A7YW98 | 660 | RARS "Arginine--tRNA ligase, c | 0.376 | 0.637 | 0.493 | 1.1e-170 | |
| RGD|1309215 | 660 | Rars "arginyl-tRNA synthetase" | 0.361 | 0.612 | 0.512 | 2.3e-170 | |
| UNIPROTKB|J9P440 | 643 | RARS "Uncharacterized protein" | 0.368 | 0.640 | 0.510 | 1.5e-164 | |
| UNIPROTKB|F1NFP5 | 608 | RARS "Arginine--tRNA ligase, c | 0.369 | 0.679 | 0.498 | 4.9e-155 |
| ZFIN|ZDB-GENE-030131-9014 rars "arginyl-tRNA synthetase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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Score = 1103 (393.3 bits), Expect = 1.4e-174, Sum P(2) = 1.4e-174
Identities = 223/436 (51%), Positives = 306/436 (70%)
Query: 195 KKMNVPVSDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMA 254
++MN +++ L +F A+ A+P+L + SV + + KFGD+QCN AMA
Sbjct: 65 EEMNHNGKTMLNINQLLQQIFGEAISSAYPDLENPPLSVTPSQQA---KFGDYQCNSAMA 121
Query: 255 LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 314
+ ++ K KG K +P +IA+ I + + +I+K E+A PGF+NV L R +
Sbjct: 122 MSQMMKAKGLKVSPREIAEKIVQNIPNN--------DLIEKTEIAGPGFINVHLKRNFVS 173
Query: 315 EQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 374
+ + +++VNGVQPP L KK +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG++V
Sbjct: 174 KLLSNVLVNGVQPPPLQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEV 233
Query: 375 VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 434
+RLNHVGDWGTQFGMLIAHLQDKFP+YL+ SPPI DLQAFYKESKKRFDEDE FKKRAY+
Sbjct: 234 LRLNHVGDWGTQFGMLIAHLQDKFPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKKRAYK 293
Query: 435 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 494
CVV LQ + D+ KAW +ICDVSR++FQK+Y+ L++++ ERGES+YQ M +V E+K
Sbjct: 294 CVVKLQSKEADFIKAWNLICDVSRKEFQKVYNCLDISIKERGESYYQDMMTAVVKEFEEK 353
Query: 495 GLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLG 554
GL+E+D+GRKI++ + SIP+TIVKSDGG+TYDTSDLAAIR R+ +EKAD I+YVTD G
Sbjct: 354 GLVEVDEGRKIVFAPGQ-SIPLTIVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYVTDSG 412
Query: 555 QGVHFRLLEESTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKS 614
Q +HF+++ + ++L+ + V R+ H G FG+++ + KF T+S
Sbjct: 413 QAMHFQVIFAA-------AQLIGWYDPKVTRVEHAG-----FGVVLGEDKKKFK---TRS 457
Query: 615 PPIADLQAFYKESKKR 630
L +E KR
Sbjct: 458 GDTVRLMDLLEEGLKR 473
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| UNIPROTKB|P54136 RARS "Arginine--tRNA ligase, cytoplasmic" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:1914297 Rars "arginyl-tRNA synthetase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2QRR5 RARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ZM11 RARS "Arginine--tRNA ligase, cytoplasmic" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| FB|FBgn0027093 Aats-arg "Arginyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A7YW98 RARS "Arginine--tRNA ligase, cytoplasmic" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| RGD|1309215 Rars "arginyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9P440 RARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NFP5 RARS "Arginine--tRNA ligase, cytoplasmic" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P40329 | SYRC_RAT | 6, ., 1, ., 1, ., 1, 9 | 0.5127 | 0.3610 | 0.6121 | yes | N/A |
| P37880 | SYRC_CRIGR | 6, ., 1, ., 1, ., 1, 9 | 0.5316 | 0.3601 | 0.6096 | yes | N/A |
| Q5RA20 | SYRC_PONAB | 6, ., 1, ., 1, ., 1, 9 | 0.5181 | 0.3690 | 0.6257 | yes | N/A |
| Q9D0I9 | SYRC_MOUSE | 6, ., 1, ., 1, ., 1, 9 | 0.5313 | 0.3610 | 0.6121 | yes | N/A |
| P54136 | SYRC_HUMAN | 6, ., 1, ., 1, ., 1, 9 | 0.5227 | 0.3690 | 0.6257 | yes | N/A |
| Q6P1S4 | SYRC_XENTR | 6, ., 1, ., 1, ., 1, 9 | 0.5198 | 0.3378 | 0.5727 | yes | N/A |
| Q9VXN4 | SYRC_DROME | 6, ., 1, ., 1, ., 1, 9 | 0.5150 | 0.3789 | 0.6375 | yes | N/A |
| Q5ZM11 | SYRC_CHICK | 6, ., 1, ., 1, ., 1, 9 | 0.5081 | 0.3601 | 0.6096 | yes | N/A |
| B1XPX8 | SYR_SYNP2 | 6, ., 1, ., 1, ., 1, 9 | 0.5060 | 0.2689 | 0.5145 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 6.1.1.19 | 0.824 |
| 3rd Layer | 6.1.1 | 0.766 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1119 | |||
| PLN02286 | 576 | PLN02286, PLN02286, arginine-tRNA ligase | 1e-146 | |
| PLN02286 | 576 | PLN02286, PLN02286, arginine-tRNA ligase | 1e-129 | |
| pfam00750 | 345 | pfam00750, tRNA-synt_1d, tRNA synthetases class I | 4e-94 | |
| COG0018 | 577 | COG0018, ArgS, Arginyl-tRNA synthetase [Translatio | 4e-86 | |
| pfam00750 | 345 | pfam00750, tRNA-synt_1d, tRNA synthetases class I | 2e-82 | |
| PRK01611 | 507 | PRK01611, argS, arginyl-tRNA synthetase; Reviewed | 9e-76 | |
| COG0018 | 577 | COG0018, ArgS, Arginyl-tRNA synthetase [Translatio | 1e-66 | |
| TIGR00456 | 566 | TIGR00456, argS, arginyl-tRNA synthetase | 2e-65 | |
| cd00671 | 212 | cd00671, ArgRS_core, catalytic core domain of argi | 4e-60 | |
| PLN02286 | 576 | PLN02286, PLN02286, arginine-tRNA ligase | 9e-58 | |
| PRK01611 | 507 | PRK01611, argS, arginyl-tRNA synthetase; Reviewed | 2e-57 | |
| TIGR00456 | 566 | TIGR00456, argS, arginyl-tRNA synthetase | 2e-54 | |
| PRK12451 | 562 | PRK12451, PRK12451, arginyl-tRNA synthetase; Revie | 3e-52 | |
| COG0018 | 577 | COG0018, ArgS, Arginyl-tRNA synthetase [Translatio | 1e-38 | |
| PRK01611 | 507 | PRK01611, argS, arginyl-tRNA synthetase; Reviewed | 3e-38 | |
| PRK12451 | 562 | PRK12451, PRK12451, arginyl-tRNA synthetase; Revie | 9e-38 | |
| TIGR00456 | 566 | TIGR00456, argS, arginyl-tRNA synthetase | 1e-35 | |
| cd07956 | 156 | cd07956, Anticodon_Ia_Arg, Anticodon-binding domai | 4e-34 | |
| cd00671 | 212 | cd00671, ArgRS_core, catalytic core domain of argi | 2e-30 | |
| pfam05746 | 117 | pfam05746, DALR_1, DALR anticodon binding domain | 8e-30 | |
| smart00836 | 122 | smart00836, DALR_1, DALR anticodon binding domain | 2e-29 | |
| PLN02286 | 576 | PLN02286, PLN02286, arginine-tRNA ligase | 2e-22 | |
| PRK01611 | 507 | PRK01611, argS, arginyl-tRNA synthetase; Reviewed | 5e-18 | |
| COG0018 | 577 | COG0018, ArgS, Arginyl-tRNA synthetase [Translatio | 9e-17 | |
| pfam03485 | 84 | pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetas | 4e-16 | |
| pfam03485 | 84 | pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetas | 7e-16 | |
| smart01016 | 85 | smart01016, Arg_tRNA_synt_N, Arginyl tRNA syntheta | 3e-14 | |
| smart01016 | 85 | smart01016, Arg_tRNA_synt_N, Arginyl tRNA syntheta | 4e-14 | |
| cd07956 | 156 | cd07956, Anticodon_Ia_Arg, Anticodon-binding domai | 5e-14 | |
| PRK12451 | 562 | PRK12451, PRK12451, arginyl-tRNA synthetase; Revie | 6e-13 | |
| TIGR00456 | 566 | TIGR00456, argS, arginyl-tRNA synthetase | 1e-09 | |
| cd00802 | 143 | cd00802, class_I_aaRS_core, catalytic core domain | 1e-07 | |
| pfam00750 | 345 | pfam00750, tRNA-synt_1d, tRNA synthetases class I | 5e-07 | |
| PRK12451 | 562 | PRK12451, PRK12451, arginyl-tRNA synthetase; Revie | 2e-05 |
| >gnl|CDD|215160 PLN02286, PLN02286, arginine-tRNA ligase | Back alignment and domain information |
|---|
Score = 451 bits (1163), Expect = e-146
Identities = 194/426 (45%), Positives = 270/426 (63%), Gaps = 35/426 (8%)
Query: 211 LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG-EKKNPF 269
L+ +F ++++ P+ VA+ KFGD+QCN+AM L K KG KNP
Sbjct: 3 LAKLFEASLRLTVPDEPSVEPLVAACTNP---KFGDYQCNNAMGLWSKLKGKGTSFKNPR 59
Query: 270 DIAQSI-ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQP- 327
+AQ+I ++ SE+ I+ VA PGFVNV LS + ++I+ ++V+G+
Sbjct: 60 AVAQAIVKNLPASEM---------IESTSVAGPGFVNVRLSASWLAKRIERMLVDGIDTW 110
Query: 328 -PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 386
PTL K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+ G +V+R NHVGDWGTQ
Sbjct: 111 APTLPVK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSGVEVLRRNHVGDWGTQ 169
Query: 387 FGMLIAHLQDKFPDYLT-KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 445
FGMLI HL +KFP++ + I DLQ FYK +KKRFDEDE FK RA Q VV LQ DP+
Sbjct: 170 FGMLIEHLFEKFPNWESVSDQAIGDLQEFYKAAKKRFDEDEEFKARAQQAVVRLQGGDPE 229
Query: 446 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 505
Y+ AW IC++SRR+F+K+Y RL V L E+GESFY ++ ++ LE KGL+ DG ++
Sbjct: 230 YRAAWAKICEISRREFEKVYQRLRVELEEKGESFYNPYIPGVIEELESKGLVVESDGARV 289
Query: 506 MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEES 565
++ E IP+ +VKSDGGF Y ++DLAA+ R+ EEKA+WI+YVTD+GQ HF ++ ++
Sbjct: 290 IFVEGF-DIPLIVVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQQHFDMVFKA 348
Query: 566 TIIGDTISRLLEYLGHDV-VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 624
++ +L D RL HVG FG+++ +F + + DL
Sbjct: 349 -------AKRAGWLPEDTYPRLEHVG-----FGLVLGEDGKRFRTRSGEVVRLVDL---L 393
Query: 625 KESKKR 630
E+K R
Sbjct: 394 DEAKSR 399
|
Length = 576 |
| >gnl|CDD|215160 PLN02286, PLN02286, arginine-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|216097 pfam00750, tRNA-synt_1d, tRNA synthetases class I (R) | Back alignment and domain information |
|---|
| >gnl|CDD|223097 COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|216097 pfam00750, tRNA-synt_1d, tRNA synthetases class I (R) | Back alignment and domain information |
|---|
| >gnl|CDD|234964 PRK01611, argS, arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223097 COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|232981 TIGR00456, argS, arginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|185675 cd00671, ArgRS_core, catalytic core domain of arginyl-tRNA synthetases | Back alignment and domain information |
|---|
| >gnl|CDD|215160 PLN02286, PLN02286, arginine-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|234964 PRK01611, argS, arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|232981 TIGR00456, argS, arginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|183534 PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223097 COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|234964 PRK01611, argS, arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|183534 PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|232981 TIGR00456, argS, arginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|153410 cd07956, Anticodon_Ia_Arg, Anticodon-binding domain of arginyl tRNA synthetases | Back alignment and domain information |
|---|
| >gnl|CDD|185675 cd00671, ArgRS_core, catalytic core domain of arginyl-tRNA synthetases | Back alignment and domain information |
|---|
| >gnl|CDD|218729 pfam05746, DALR_1, DALR anticodon binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|214846 smart00836, DALR_1, DALR anticodon binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|215160 PLN02286, PLN02286, arginine-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|234964 PRK01611, argS, arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223097 COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|217589 pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|217589 pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|214975 smart01016, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal dom | Back alignment and domain information |
|---|
| >gnl|CDD|214975 smart01016, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal dom | Back alignment and domain information |
|---|
| >gnl|CDD|153410 cd07956, Anticodon_Ia_Arg, Anticodon-binding domain of arginyl tRNA synthetases | Back alignment and domain information |
|---|
| >gnl|CDD|183534 PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|232981 TIGR00456, argS, arginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|216097 pfam00750, tRNA-synt_1d, tRNA synthetases class I (R) | Back alignment and domain information |
|---|
| >gnl|CDD|183534 PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1119 | |||
| KOG4426|consensus | 656 | 100.0 | ||
| COG0018 | 577 | ArgS Arginyl-tRNA synthetase [Translation, ribosom | 100.0 | |
| PLN02286 | 576 | arginine-tRNA ligase | 100.0 | |
| PRK12451 | 562 | arginyl-tRNA synthetase; Reviewed | 100.0 | |
| TIGR00456 | 566 | argS arginyl-tRNA synthetase. This model recognize | 100.0 | |
| PRK01611 | 507 | argS arginyl-tRNA synthetase; Reviewed | 100.0 | |
| KOG1195|consensus | 567 | 100.0 | ||
| PF00750 | 354 | tRNA-synt_1d: tRNA synthetases class I (R); InterP | 100.0 | |
| cd00671 | 212 | ArgRS_core catalytic core domain of arginyl-tRNA s | 100.0 | |
| PF00750 | 354 | tRNA-synt_1d: tRNA synthetases class I (R); InterP | 100.0 | |
| KOG4426|consensus | 656 | 100.0 | ||
| KOG1195|consensus | 567 | 100.0 | ||
| PRK12451 | 562 | arginyl-tRNA synthetase; Reviewed | 100.0 | |
| PLN02286 | 576 | arginine-tRNA ligase | 100.0 | |
| COG0018 | 577 | ArgS Arginyl-tRNA synthetase [Translation, ribosom | 100.0 | |
| TIGR00456 | 566 | argS arginyl-tRNA synthetase. This model recognize | 100.0 | |
| cd07956 | 156 | Anticodon_Ia_Arg Anticodon-binding domain of argin | 99.97 | |
| PRK01611 | 507 | argS arginyl-tRNA synthetase; Reviewed | 99.92 | |
| PF05746 | 119 | DALR_1: DALR anticodon binding domain; InterPro: I | 99.91 | |
| cd00671 | 212 | ArgRS_core catalytic core domain of arginyl-tRNA s | 99.87 | |
| smart00836 | 122 | DALR_1 DALR anticodon binding domain. This all alp | 99.87 | |
| PTZ00399 | 651 | cysteinyl-tRNA-synthetase; Provisional | 99.78 | |
| TIGR00398 | 530 | metG methionyl-tRNA synthetase. The methionyl-tRNA | 99.72 | |
| PRK11893 | 511 | methionyl-tRNA synthetase; Reviewed | 99.69 | |
| PRK00133 | 673 | metG methionyl-tRNA synthetase; Reviewed | 99.65 | |
| PF03485 | 85 | Arg_tRNA_synt_N: Arginyl tRNA synthetase N termina | 99.64 | |
| cd00802 | 143 | class_I_aaRS_core catalytic core domain of class I | 99.62 | |
| PF03485 | 85 | Arg_tRNA_synt_N: Arginyl tRNA synthetase N termina | 99.62 | |
| PRK12268 | 556 | methionyl-tRNA synthetase; Reviewed | 99.58 | |
| PRK00260 | 463 | cysS cysteinyl-tRNA synthetase; Validated | 99.51 | |
| PLN02946 | 557 | cysteine-tRNA ligase | 99.46 | |
| TIGR00464 | 470 | gltX_bact glutamyl-tRNA synthetase, bacterial fami | 99.4 | |
| PRK01406 | 476 | gltX glutamyl-tRNA synthetase; Reviewed | 99.31 | |
| cd00812 | 314 | LeuRS_core catalytic core domain of leucyl-tRNA sy | 99.29 | |
| TIGR00435 | 465 | cysS cysteinyl-tRNA synthetase. This model finds t | 99.27 | |
| PRK12267 | 648 | methionyl-tRNA synthetase; Reviewed | 99.27 | |
| cd00668 | 312 | Ile_Leu_Val_MetRS_core catalytic core domain of is | 99.26 | |
| PLN02224 | 616 | methionine-tRNA ligase | 99.23 | |
| PRK06039 | 975 | ileS isoleucyl-tRNA synthetase; Reviewed | 99.06 | |
| cd00674 | 353 | LysRS_core_class_I catalytic core domain of class | 99.03 | |
| PRK14895 | 513 | gltX glutamyl-tRNA synthetase; Provisional | 99.02 | |
| cd00814 | 319 | MetRS_core catalytic core domain of methioninyl-tR | 98.88 | |
| PRK14536 | 490 | cysS cysteinyl-tRNA synthetase; Provisional | 98.86 | |
| cd00818 | 338 | IleRS_core catalytic core domain of isoleucyl-tRNA | 98.76 | |
| cd07956 | 156 | Anticodon_Ia_Arg Anticodon-binding domain of argin | 98.69 | |
| PRK14534 | 481 | cysS cysteinyl-tRNA synthetase; Provisional | 98.67 | |
| cd00817 | 382 | ValRS_core catalytic core domain of valyl-tRNA syn | 98.67 | |
| cd00672 | 213 | CysRS_core catalytic core domain of cysteinyl tRNA | 98.62 | |
| PRK12418 | 384 | cysteinyl-tRNA synthetase; Provisional | 98.58 | |
| PRK00750 | 510 | lysK lysyl-tRNA synthetase; Reviewed | 98.54 | |
| TIGR03447 | 411 | mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- | 98.53 | |
| COG0143 | 558 | MetG Methionyl-tRNA synthetase [Translation, ribos | 98.5 | |
| PRK13208 | 800 | valS valyl-tRNA synthetase; Reviewed | 98.47 | |
| PF09334 | 391 | tRNA-synt_1g: tRNA synthetases class I (M); InterP | 98.29 | |
| TIGR00467 | 515 | lysS_arch lysyl-tRNA synthetase, archaeal and spir | 98.28 | |
| PRK14535 | 699 | cysS cysteinyl-tRNA synthetase; Provisional | 98.24 | |
| TIGR00422 | 861 | valS valyl-tRNA synthetase. The valyl-tRNA synthet | 98.21 | |
| TIGR00396 | 842 | leuS_bact leucyl-tRNA synthetase, eubacterial and | 98.21 | |
| PLN02610 | 801 | probable methionyl-tRNA synthetase | 98.2 | |
| PLN02381 | 1066 | valyl-tRNA synthetase | 98.17 | |
| PLN02943 | 958 | aminoacyl-tRNA ligase | 98.11 | |
| PTZ00419 | 995 | valyl-tRNA synthetase-like protein; Provisional | 98.11 | |
| PRK14900 | 1052 | valS valyl-tRNA synthetase; Provisional | 98.11 | |
| PRK00390 | 805 | leuS leucyl-tRNA synthetase; Validated | 98.09 | |
| PLN02563 | 963 | aminoacyl-tRNA ligase | 98.08 | |
| PRK05729 | 874 | valS valyl-tRNA synthetase; Reviewed | 98.04 | |
| TIGR00395 | 938 | leuS_arch leucyl-tRNA synthetase, archaeal and cyt | 98.03 | |
| COG0215 | 464 | CysS Cysteinyl-tRNA synthetase [Translation, ribos | 98.03 | |
| PF01406 | 300 | tRNA-synt_1e: tRNA synthetases class I (C) catalyt | 98.03 | |
| PF00133 | 601 | tRNA-synt_1: tRNA synthetases class I (I, L, M and | 98.03 | |
| PRK05743 | 912 | ileS isoleucyl-tRNA synthetase; Reviewed | 97.97 | |
| PTZ00427 | 1205 | isoleucine-tRNA ligase, putative; Provisional | 97.96 | |
| cd00802 | 143 | class_I_aaRS_core catalytic core domain of class I | 97.95 | |
| TIGR00392 | 861 | ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA | 97.94 | |
| PRK12558 | 445 | glutamyl-tRNA synthetase; Provisional | 97.89 | |
| COG0495 | 814 | LeuS Leucyl-tRNA synthetase [Translation, ribosoma | 97.88 | |
| PLN02882 | 1159 | aminoacyl-tRNA ligase | 97.87 | |
| PRK13804 | 961 | ileS isoleucyl-tRNA synthetase; Provisional | 97.81 | |
| cd00814 | 319 | MetRS_core catalytic core domain of methioninyl-tR | 97.81 | |
| PLN02843 | 974 | isoleucyl-tRNA synthetase | 97.79 | |
| cd00808 | 239 | GluRS_core catalytic core domain of discriminating | 97.75 | |
| COG0525 | 877 | ValS Valyl-tRNA synthetase [Translation, ribosomal | 97.73 | |
| PLN02959 | 1084 | aminoacyl-tRNA ligase | 97.55 | |
| TIGR00435 | 465 | cysS cysteinyl-tRNA synthetase. This model finds t | 97.54 | |
| TIGR00398 | 530 | metG methionyl-tRNA synthetase. The methionyl-tRNA | 97.42 | |
| PRK00260 | 463 | cysS cysteinyl-tRNA synthetase; Validated | 97.39 | |
| COG0143 | 558 | MetG Methionyl-tRNA synthetase [Translation, ribos | 97.34 | |
| KOG2007|consensus | 586 | 97.28 | ||
| PRK12410 | 433 | glutamylglutaminyl-tRNA synthetase; Provisional | 97.1 | |
| PLN02610 | 801 | probable methionyl-tRNA synthetase | 97.08 | |
| PF00749 | 314 | tRNA-synt_1c: tRNA synthetases class I (E and Q), | 97.05 | |
| PLN02627 | 535 | glutamyl-tRNA synthetase | 97.05 | |
| PRK12267 | 648 | methionyl-tRNA synthetase; Reviewed | 97.03 | |
| KOG1149|consensus | 524 | 96.95 | ||
| cd09287 | 240 | GluRS_non_core catalytic core domain of non-discri | 96.88 | |
| PRK12300 | 897 | leuS leucyl-tRNA synthetase; Reviewed | 96.76 | |
| KOG0435|consensus | 876 | 96.73 | ||
| PRK11893 | 511 | methionyl-tRNA synthetase; Reviewed | 96.65 | |
| COG1384 | 521 | LysS Lysyl-tRNA synthetase (class I) [Translation, | 96.57 | |
| cd00668 | 312 | Ile_Leu_Val_MetRS_core catalytic core domain of is | 96.57 | |
| PRK12418 | 384 | cysteinyl-tRNA synthetase; Provisional | 96.53 | |
| cd00818 | 338 | IleRS_core catalytic core domain of isoleucyl-tRNA | 96.51 | |
| cd00817 | 382 | ValRS_core catalytic core domain of valyl-tRNA syn | 96.46 | |
| cd00807 | 238 | GlnRS_core catalytic core domain of glutaminyl-tRN | 96.36 | |
| TIGR00392 | 861 | ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA | 96.35 | |
| PLN02224 | 616 | methionine-tRNA ligase | 96.34 | |
| cd00812 | 314 | LeuRS_core catalytic core domain of leucyl-tRNA sy | 96.33 | |
| TIGR03838 | 272 | queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe | 96.32 | |
| PRK04156 | 567 | gltX glutamyl-tRNA synthetase; Provisional | 96.24 | |
| cd00418 | 230 | GlxRS_core catalytic core domain of glutamyl-tRNA | 96.23 | |
| PRK14534 | 481 | cysS cysteinyl-tRNA synthetase; Provisional | 96.18 | |
| TIGR03447 | 411 | mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- | 96.16 | |
| KOG0432|consensus | 995 | 96.12 | ||
| COG0215 | 464 | CysS Cysteinyl-tRNA synthetase [Translation, ribos | 96.07 | |
| PLN02946 | 557 | cysteine-tRNA ligase | 95.99 | |
| TIGR00463 | 560 | gltX_arch glutamyl-tRNA synthetase, archaeal and e | 95.9 | |
| PRK05729 | 874 | valS valyl-tRNA synthetase; Reviewed | 95.81 | |
| PTZ00402 | 601 | glutamyl-tRNA synthetase; Provisional | 95.8 | |
| PRK00133 | 673 | metG methionyl-tRNA synthetase; Reviewed | 95.79 | |
| PRK14536 | 490 | cysS cysteinyl-tRNA synthetase; Provisional | 95.78 | |
| COG0008 | 472 | GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr | 95.75 | |
| PLN03233 | 523 | putative glutamate-tRNA ligase; Provisional | 95.75 | |
| PLN02907 | 722 | glutamate-tRNA ligase | 95.71 | |
| PF09334 | 391 | tRNA-synt_1g: tRNA synthetases class I (M); InterP | 95.68 | |
| PTZ00437 | 574 | glutaminyl-tRNA synthetase; Provisional | 95.65 | |
| PRK12268 | 556 | methionyl-tRNA synthetase; Reviewed | 95.64 | |
| PRK05710 | 299 | glutamyl-Q tRNA(Asp) synthetase; Reviewed | 95.62 | |
| PRK14535 | 699 | cysS cysteinyl-tRNA synthetase; Provisional | 95.61 | |
| PRK14703 | 771 | glutaminyl-tRNA synthetase/YqeY domain fusion prot | 95.6 | |
| KOG0436|consensus | 578 | 95.49 | ||
| PRK05347 | 554 | glutaminyl-tRNA synthetase; Provisional | 95.45 | |
| PTZ00399 | 651 | cysteinyl-tRNA-synthetase; Provisional | 95.12 | |
| PF01406 | 300 | tRNA-synt_1e: tRNA synthetases class I (C) catalyt | 94.39 | |
| COG0060 | 933 | IleS Isoleucyl-tRNA synthetase [Translation, ribos | 94.22 | |
| TIGR00440 | 522 | glnS glutaminyl-tRNA synthetase. This protein is a | 93.97 | |
| PRK13208 | 800 | valS valyl-tRNA synthetase; Reviewed | 93.85 | |
| cd00418 | 230 | GlxRS_core catalytic core domain of glutamyl-tRNA | 93.82 | |
| TIGR00396 | 842 | leuS_bact leucyl-tRNA synthetase, eubacterial and | 93.55 | |
| PRK01233 | 682 | glyS glycyl-tRNA synthetase subunit beta; Validate | 93.48 | |
| TIGR00211 | 691 | glyS glycyl-tRNA synthetase, tetrameric type, beta | 93.3 | |
| PLN02859 | 788 | glutamine-tRNA ligase | 93.27 | |
| PRK00390 | 805 | leuS leucyl-tRNA synthetase; Validated | 92.69 | |
| PLN02563 | 963 | aminoacyl-tRNA ligase | 92.54 | |
| cd00672 | 213 | CysRS_core catalytic core domain of cysteinyl tRNA | 92.44 | |
| KOG0436|consensus | 578 | 92.41 | ||
| COG0751 | 691 | GlyS Glycyl-tRNA synthetase, beta subunit [Transla | 91.92 | |
| PRK13804 | 961 | ileS isoleucyl-tRNA synthetase; Provisional | 91.65 | |
| PRK14900 | 1052 | valS valyl-tRNA synthetase; Provisional | 91.46 | |
| PRK14908 | 1000 | glycyl-tRNA synthetase; Provisional | 91.32 | |
| TIGR00422 | 861 | valS valyl-tRNA synthetase. The valyl-tRNA synthet | 90.34 | |
| PLN02943 | 958 | aminoacyl-tRNA ligase | 90.17 | |
| cd00674 | 353 | LysRS_core_class_I catalytic core domain of class | 89.89 | |
| COG0495 | 814 | LeuS Leucyl-tRNA synthetase [Translation, ribosoma | 88.82 | |
| PF00133 | 601 | tRNA-synt_1: tRNA synthetases class I (I, L, M and | 88.55 | |
| PRK05743 | 912 | ileS isoleucyl-tRNA synthetase; Reviewed | 87.89 | |
| COG0525 | 877 | ValS Valyl-tRNA synthetase [Translation, ribosomal | 87.8 | |
| PRK12558 | 445 | glutamyl-tRNA synthetase; Provisional | 86.2 | |
| PLN02381 | 1066 | valyl-tRNA synthetase | 85.87 | |
| PTZ00419 | 995 | valyl-tRNA synthetase-like protein; Provisional | 85.63 | |
| PF01921 | 360 | tRNA-synt_1f: tRNA synthetases class I (K); InterP | 85.43 | |
| cd07375 | 117 | Anticodon_Ia_like Anticodon-binding domain of clas | 84.9 | |
| KOG0434|consensus | 1070 | 84.29 | ||
| PRK12300 | 897 | leuS leucyl-tRNA synthetase; Reviewed | 84.05 | |
| TIGR00395 | 938 | leuS_arch leucyl-tRNA synthetase, archaeal and cyt | 82.58 | |
| PRK00750 | 510 | lysK lysyl-tRNA synthetase; Reviewed | 82.08 | |
| PLN02843 | 974 | isoleucyl-tRNA synthetase | 81.98 | |
| KOG0433|consensus | 937 | 80.69 |
| >KOG4426|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-128 Score=1062.62 Aligned_cols=584 Identities=61% Similarity=1.012 Sum_probs=551.0
Q ss_pred cHHHHHHHHHHHHHHHhcCcCCCCcceEeecCcccccCCccchhchHHHHHHHhhccCCCCCHHHHHHHHHHhhcccccC
Q psy6783 206 SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELAT 285 (1119)
Q Consensus 206 ~i~~~l~~~i~~al~~~~~~~~~~~~~ve~p~~~~~~~~GD~atn~Am~lAK~~k~~~~~~~P~~IA~~i~~~l~~~l~~ 285 (1119)
||+.++...+..+|+.++|+..+.++.|.+++++ +|||||||.||.|++.+|.++.+++|++||++|..+ +|.
T Consensus 72 ni~~~L~~lF~~aik~a~Pd~~~vp~liaps~~~---kFGDYQCNnAMgl~~~lK~kg~~~~P~~va~~l~~~----lP~ 144 (656)
T KOG4426|consen 72 NIFRRLQSLFDVAIKLAFPDLPDVPLLIAPSPNA---KFGDYQCNNAMGLSSKLKGKGINKRPRDVAQELQKH----LPT 144 (656)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCceeccCccc---ccccccccchhhHHHHHhhcCCccCcHHHHHHHHhh----CCc
Confidence 8999999999999999999876677788888777 999999999999999999888888999999999999 887
Q ss_pred CcccccceeeEEEeCCeEEEEEeCHHHHHHHHHHHHHcCCCCCCCCCCcEEEEEeeCCCCCCCccccccchhcHHHHHHH
Q psy6783 286 NPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISR 365 (1119)
Q Consensus 286 ~~~~~~~ie~vevagpGFINf~L~~~~~~~~l~~il~~g~~~~~~~~~kkV~VEfsSpNptkpLHVGHlRsaiiGDsLar 365 (1119)
+ +.||+++||||||||++|+.+|....+..++.+|...+.+. .++|+|||||||++|.|||||+|||||||+|||
T Consensus 145 s----e~vEk~~iagpGFiNv~Ls~d~~~~~i~nll~~GV~~P~l~-~KrvlVDFSSPNIAKeMHVGHLRSTIIGdsl~R 219 (656)
T KOG4426|consen 145 S----EMVEKCEIAGPGFINVFLSKDYMSKQISNLLVNGVKLPTLS-VKRVLVDFSSPNIAKEMHVGHLRSTIIGDSLCR 219 (656)
T ss_pred h----hhhhhhcccCCceEEEEechHHHHHHHHHHHHcCCCCcccc-eeeEEEecCCCcHHHHhhhhhhhhhhHhHHHHH
Confidence 7 89999999999999999999999999999999999887764 489999999999999999999999999999999
Q ss_pred HHHHcCCcEEEecccCCchhHHHHHHHHHHhhcCCCCCCCCChHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHhcCChh
Q psy6783 366 LLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 445 (1119)
Q Consensus 366 il~~~Gy~V~renyInD~G~Qi~~L~~~~~~r~~e~~~~~~~i~~l~~~y~~~~~~~~~de~~~~~a~~~~~~le~gd~e 445 (1119)
+|++.||+|.|.|||||||||||||+++++.+||+.....++|.||.-+|++.+++|++||+|+++|++++++||.|||.
T Consensus 220 llE~~~~dVlR~NHvGDWGTQFGMLIahL~dkFPd~l~vsp~IgDLQvFYkeSKkrFD~deeFKkrAyq~VV~LQggdp~ 299 (656)
T KOG4426|consen 220 LLEFSGVDVLRRNHVGDWGTQFGMLIAHLFDKFPDYLSVSPPIGDLQVFYKESKKRFDEDEEFKKRAYQAVVRLQGGDPD 299 (656)
T ss_pred HHHhcCcceEeeccccchHHHHHHHHHHHHHhCCchhccCCCchhHHHHHHHHHhccCcCHHHHHHHHHHeeecccCCCh
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCcEEeccchhhhhHHHHHHHHHHHHCCCeEeeCCCeEEEcCCCCCCCeEEEecCCCc
Q psy6783 446 YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGF 525 (1119)
Q Consensus 446 ~~~lW~~~~~~s~~~~~~~y~~l~i~f~~~geS~y~~~v~~vi~~L~~kG~~~e~dGA~~~~~ddkd~~~~VL~KSDGt~ 525 (1119)
+++.|..+|++|+++|+.+|++|+|++.+.|||||++.+.+++++|+.+|++.++||+.++|.++-+ .|..++||||++
T Consensus 300 ~~kAW~~ICdvSr~ef~kvY~rLdi~l~e~GESFYq~~m~~vveel~~kglvee~~Gr~i~f~~g~~-IPLtvVKSDGGf 378 (656)
T KOG4426|consen 300 IRKAWALICDVSRKEFQKVYNRLDISLKERGESFYQDRMAEVVEELKSKGLVEEDDGRRIMFPEGCD-IPLTVVKSDGGF 378 (656)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHhcchHhhcchhhhhhHHHHHHHHHhcCCceeecCCceEeccCCCC-cceEEEecCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999877 799999999999
Q ss_pred ccchhhHHHHHHHhhhhCCCEEEEEeecCcccchhhhhhhhhhHHHHHHHHHHcCCceeeecccCcchhhHHHHHHHHhh
Q psy6783 526 TYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEESTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQD 605 (1119)
Q Consensus 526 tY~t~DIAy~~~R~~~~~~d~iIyVv~~~Q~~H~~~~~RStIIG~~l~~l~~~~G~~V~r~NylGDwG~QfG~l~~g~~~ 605 (1119)
||.|+|+|+++||+.+.++||+|||||++|+.||..
T Consensus 379 tYdtsDlaAl~yRl~EEkadwiIYVvD~GQs~Hf~t-------------------------------------------- 414 (656)
T KOG4426|consen 379 TYDTSDLAALKYRLNEEKADWIIYVVDSGQSQHFNT-------------------------------------------- 414 (656)
T ss_pred ccccchHHHHHHHHHHhhcCeEEEEeeCchhHHHHH--------------------------------------------
Confidence 999999999999999999999999999999999986
Q ss_pred hcCCCCCCCCchhhHHHHHHHHhhhcCccHHHHHHHHHHHHHhhcCChhHHHHHHHHHHhhHHHHHHHHHHhcccccccc
Q psy6783 606 KFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERG 685 (1119)
Q Consensus 606 ~~~~~~~~~~~i~~L~~~Y~~~~~~~~~d~~~~~~a~~~~~~le~gd~e~~~lW~~~rd~Si~~~~~~Y~rL~V~Fd~~g 685 (1119)
T Consensus 415 -------------------------------------------------------------------------------- 414 (656)
T KOG4426|consen 415 -------------------------------------------------------------------------------- 414 (656)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhHHHHHHHHHhcCCeeeecCceEEEEecCCcchhhHHHHHHHHHcCCCCCCCCCceeeeeeEEECCCCcccccc
Q psy6783 686 ESFYQKHMEQLVPYLEKKGNLSLTKKLGIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTR 765 (1119)
Q Consensus 686 ES~y~~~~~~vi~~l~~~g~~~~~~~~~~v~v~d~~~~~h~~~l~~~~~~~g~~~~~~~~~~h~~fg~V~~~~~~~~str 765 (1119)
+++++++.||++|...|+.|++||+|+|+|+++|+||
T Consensus 415 -------------------------------------------~fkAar~~gwld~~~~RV~HvgFGlVLGeD~KkFkTR 451 (656)
T KOG4426|consen 415 -------------------------------------------IFKAARKAGWLDPTYPRVEHVGFGLVLGEDKKKFKTR 451 (656)
T ss_pred -------------------------------------------HHHHHHHcCccCCCccceeeeeeeeEEccCccccccc
Confidence 5677888999999889999999999999999999999
Q ss_pred cCCeeeHHHHHHHHHHHHHHHHHhccCCCCCChhhhHHHHHHhhhceeeeecccCCCCCcccccccccccccCCchhhhH
Q psy6783 766 SGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLL 845 (1119)
Q Consensus 766 ~G~~v~l~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~v~~gaI~~~dl~~~r~~~y~F~~~~~~~~~g~t~~yl~ 845 (1119)
.|.+|.|.|||+|+..|+++.+.+++|++
T Consensus 452 sgetVrL~DLLdEg~kRs~~~Liergrdk--------------------------------------------------- 480 (656)
T KOG4426|consen 452 SGETVRLLDLLDEGKKRSKEKLIERGRDK--------------------------------------------------- 480 (656)
T ss_pred ccceeeHHHHHHHHHHHHHHHHHHhcccc---------------------------------------------------
Confidence 99999999999999999988888776543
Q ss_pred HHHHHHHHHHHhhCCCCCCCCCCCCCCcccccccCCCCCcCCCCCCCchhHHHHHHhhhccccccccccccCccchhhhh
Q psy6783 846 YAYTRIASIARTAGINSEDPPEPDPSQSEVEDRCCPSHAKTHRKPPFTYTELIEQALKENGLCWVWRGVGRGQEEVQDSL 925 (1119)
Q Consensus 846 y~~~rl~si~rk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1119)
T Consensus 481 -------------------------------------------------------------------------------- 480 (656)
T KOG4426|consen 481 -------------------------------------------------------------------------------- 480 (656)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcchhhhhhHHhhhcccCCCCChhhhHHHHHHHhhhhhhhhhcccCCCCCcccchhhhccccCCchhHHHHHHHHHHHHH
Q psy6783 926 RGYGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIA 1005 (1119)
Q Consensus 926 ~~~~~~~~~~~~~~k~~~~~~~~~e~~~~~~~v~~~ai~~~~L~~~r~~~~~Fd~d~~l~~~gnt~~YlQYahARi~SIl 1005 (1119)
.|+++|+.+++++||.|||||+||+++|.++|+|++|+||+..|||++||.|||+|||||.
T Consensus 481 -------------------~~tpeeL~~a~eavayGciKYaDL~hnR~~dY~FSFDkML~DrGnTAvYLLYa~tRIcSI~ 541 (656)
T KOG4426|consen 481 -------------------VLTPEELDAAQEAVAYGCIKYADLSHNRITDYIFSFDKMLEDRGNTAVYLLYAYTRICSIA 541 (656)
T ss_pred -------------------cCCHHHHHHHHHHHHhcchhHhhhccccccceeeeHHHHhhccCcceehhHHHHHHHHHHH
Confidence 4567778888899999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCcchhhh-hccCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhcchHHHHHHHHHHHHHHHhhhhcccccccCCcc
Q psy6783 1006 RTAGINSEDLRV-AAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEG 1084 (1119)
Q Consensus 1006 rKa~~~~~~l~~-~~~~~~~~L~~~~E~~Li~~L~~fpevl~~Aa~~l~P~~L~~YL~~LA~~F~~FY~~~~VL~~~~~~ 1084 (1119)
||+|.+...+.. ....+...|.|+.||.|.++|++|+|+|+.+..++-||.||+|+|+||..|+.||++|.|++.++++
T Consensus 542 rksg~d~~~l~~~lkkT~ki~LDH~~E~kLg~~lLkf~e~v~~~~~~L~lh~lC~y~y~l~t~Ft~FY~~Cyv~e~~~eg 621 (656)
T KOG4426|consen 542 RKSGKDNVDLIKELKKTGKIALDHEKEWKLGKHLLKFAEIVEKALDSLFLHVLCDYLYELATLFTEFYDSCYVIEKNKEG 621 (656)
T ss_pred HHcCCchhhHHHHHHhcCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccEEecccccc
Confidence 999987544432 2234567899999999999999999999999999999999999999999999999999999888778
Q ss_pred chhhhHhHHHHHHHHHHHHHHHHhhhcCCCcCcCC
Q psy6783 1085 KIKTVHTGRLLLAEATAKVMKKCFDILNIRTVHKM 1119 (1119)
Q Consensus 1085 ~~~~~~~aRL~L~~at~~VL~~gL~LLGI~~~erM 1119 (1119)
+.+.+..+||+||+||+.|++.|+.+|||.|+.+|
T Consensus 622 ~i~~vn~sRllLCeata~VmrkcF~iLGi~pV~km 656 (656)
T KOG4426|consen 622 EIPFVNMSRLLLCEATAAVMRKCFHILGIKPVYKM 656 (656)
T ss_pred ccccchhHHHHHHHHHHHHHHHhhHhhCCcccccC
Confidence 88889999999999999999999999999999998
|
|
| >COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN02286 arginine-tRNA ligase | Back alignment and domain information |
|---|
| >PRK12451 arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00456 argS arginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK01611 argS arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >KOG1195|consensus | Back alignment and domain information |
|---|
| >PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases | Back alignment and domain information |
|---|
| >PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >KOG4426|consensus | Back alignment and domain information |
|---|
| >KOG1195|consensus | Back alignment and domain information |
|---|
| >PRK12451 arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PLN02286 arginine-tRNA ligase | Back alignment and domain information |
|---|
| >COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >TIGR00456 argS arginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >cd07956 Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases | Back alignment and domain information |
|---|
| >PRK01611 argS arginyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PF05746 DALR_1: DALR anticodon binding domain; InterPro: IPR008909 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases | Back alignment and domain information |
|---|
| >smart00836 DALR_1 DALR anticodon binding domain | Back alignment and domain information |
|---|
| >PTZ00399 cysteinyl-tRNA-synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00398 metG methionyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK11893 methionyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PRK00133 metG methionyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PF03485 Arg_tRNA_synt_N: Arginyl tRNA synthetase N terminal domain; InterPro: IPR005148 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PF03485 Arg_tRNA_synt_N: Arginyl tRNA synthetase N terminal domain; InterPro: IPR005148 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >PRK12268 methionyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PRK00260 cysS cysteinyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >PLN02946 cysteine-tRNA ligase | Back alignment and domain information |
|---|
| >TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family | Back alignment and domain information |
|---|
| >PRK01406 gltX glutamyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases | Back alignment and domain information |
|---|
| >TIGR00435 cysS cysteinyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK12267 methionyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases | Back alignment and domain information |
|---|
| >PLN02224 methionine-tRNA ligase | Back alignment and domain information |
|---|
| >PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase | Back alignment and domain information |
|---|
| >PRK14895 gltX glutamyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases | Back alignment and domain information |
|---|
| >PRK14536 cysS cysteinyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases | Back alignment and domain information |
|---|
| >cd07956 Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases | Back alignment and domain information |
|---|
| >PRK14534 cysS cysteinyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases | Back alignment and domain information |
|---|
| >cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase | Back alignment and domain information |
|---|
| >PRK12418 cysteinyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK00750 lysK lysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase | Back alignment and domain information |
|---|
| >COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK13208 valS valyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete | Back alignment and domain information |
|---|
| >PRK14535 cysS cysteinyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00422 valS valyl-tRNA synthetase | Back alignment and domain information |
|---|
| >TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family | Back alignment and domain information |
|---|
| >PLN02610 probable methionyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PLN02381 valyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PLN02943 aminoacyl-tRNA ligase | Back alignment and domain information |
|---|
| >PTZ00419 valyl-tRNA synthetase-like protein; Provisional | Back alignment and domain information |
|---|
| >PRK14900 valS valyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK00390 leuS leucyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >PLN02563 aminoacyl-tRNA ligase | Back alignment and domain information |
|---|
| >PRK05729 valS valyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family | Back alignment and domain information |
|---|
| >COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PTZ00427 isoleucine-tRNA ligase, putative; Provisional | Back alignment and domain information |
|---|
| >cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase | Back alignment and domain information |
|---|
| >TIGR00392 ileS isoleucyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK12558 glutamyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN02882 aminoacyl-tRNA ligase | Back alignment and domain information |
|---|
| >PRK13804 ileS isoleucyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases | Back alignment and domain information |
|---|
| >PLN02843 isoleucyl-tRNA synthetase | Back alignment and domain information |
|---|
| >cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase | Back alignment and domain information |
|---|
| >COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN02959 aminoacyl-tRNA ligase | Back alignment and domain information |
|---|
| >TIGR00435 cysS cysteinyl-tRNA synthetase | Back alignment and domain information |
|---|
| >TIGR00398 metG methionyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK00260 cysS cysteinyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG2007|consensus | Back alignment and domain information |
|---|
| >PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PLN02610 probable methionyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >PLN02627 glutamyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK12267 methionyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >KOG1149|consensus | Back alignment and domain information |
|---|
| >cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK12300 leuS leucyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >KOG0435|consensus | Back alignment and domain information |
|---|
| >PRK11893 methionyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases | Back alignment and domain information |
|---|
| >PRK12418 cysteinyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases | Back alignment and domain information |
|---|
| >cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases | Back alignment and domain information |
|---|
| >cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase | Back alignment and domain information |
|---|
| >TIGR00392 ileS isoleucyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PLN02224 methionine-tRNA ligase | Back alignment and domain information |
|---|
| >cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases | Back alignment and domain information |
|---|
| >TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase | Back alignment and domain information |
|---|
| >PRK04156 gltX glutamyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK14534 cysS cysteinyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase | Back alignment and domain information |
|---|
| >KOG0432|consensus | Back alignment and domain information |
|---|
| >COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN02946 cysteine-tRNA ligase | Back alignment and domain information |
|---|
| >TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family | Back alignment and domain information |
|---|
| >PRK05729 valS valyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PTZ00402 glutamyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK00133 metG methionyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PRK14536 cysS cysteinyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN03233 putative glutamate-tRNA ligase; Provisional | Back alignment and domain information |
|---|
| >PLN02907 glutamate-tRNA ligase | Back alignment and domain information |
|---|
| >PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >PTZ00437 glutaminyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK12268 methionyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed | Back alignment and domain information |
|---|
| >PRK14535 cysS cysteinyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional | Back alignment and domain information |
|---|
| >KOG0436|consensus | Back alignment and domain information |
|---|
| >PRK05347 glutaminyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PTZ00399 cysteinyl-tRNA-synthetase; Provisional | Back alignment and domain information |
|---|
| >PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >TIGR00440 glnS glutaminyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK13208 valS valyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase | Back alignment and domain information |
|---|
| >TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family | Back alignment and domain information |
|---|
| >PRK01233 glyS glycyl-tRNA synthetase subunit beta; Validated | Back alignment and domain information |
|---|
| >TIGR00211 glyS glycyl-tRNA synthetase, tetrameric type, beta subunit | Back alignment and domain information |
|---|
| >PLN02859 glutamine-tRNA ligase | Back alignment and domain information |
|---|
| >PRK00390 leuS leucyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >PLN02563 aminoacyl-tRNA ligase | Back alignment and domain information |
|---|
| >cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase | Back alignment and domain information |
|---|
| >KOG0436|consensus | Back alignment and domain information |
|---|
| >COG0751 GlyS Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK13804 ileS isoleucyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK14900 valS valyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK14908 glycyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00422 valS valyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PLN02943 aminoacyl-tRNA ligase | Back alignment and domain information |
|---|
| >cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase | Back alignment and domain information |
|---|
| >COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK12558 glutamyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PLN02381 valyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PTZ00419 valyl-tRNA synthetase-like protein; Provisional | Back alignment and domain information |
|---|
| >PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains | Back alignment and domain information |
|---|
| >KOG0434|consensus | Back alignment and domain information |
|---|
| >PRK12300 leuS leucyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family | Back alignment and domain information |
|---|
| >PRK00750 lysK lysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PLN02843 isoleucyl-tRNA synthetase | Back alignment and domain information |
|---|
| >KOG0433|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1119 | ||||
| 1bs2_A | 607 | Yeast Arginyl-Trna Synthetase Length = 607 | 6e-22 | ||
| 1bs2_A | 607 | Yeast Arginyl-Trna Synthetase Length = 607 | 5e-16 | ||
| 1bs2_A | 607 | Yeast Arginyl-Trna Synthetase Length = 607 | 4e-07 | ||
| 2zue_A | 629 | Crystal Structure Of Pyrococcus Horikoshii Arginyl- | 1e-12 | ||
| 2zue_A | 629 | Crystal Structure Of Pyrococcus Horikoshii Arginyl- | 1e-09 | ||
| 1iq0_A | 592 | Thermus Thermophilus Arginyl-Trna Synthetase Length | 2e-08 | ||
| 1iq0_A | 592 | Thermus Thermophilus Arginyl-Trna Synthetase Length | 2e-05 | ||
| 3fnr_A | 464 | Crystal Structure Of Putative Arginyl T-Rna Synthet | 2e-07 |
| >pdb|1BS2|A Chain A, Yeast Arginyl-Trna Synthetase Length = 607 | Back alignment and structure |
|
| >pdb|1BS2|A Chain A, Yeast Arginyl-Trna Synthetase Length = 607 | Back alignment and structure |
| >pdb|1BS2|A Chain A, Yeast Arginyl-Trna Synthetase Length = 607 | Back alignment and structure |
| >pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna Synthetase Complexed With Trna(Arg) And An Atp Analog (Anp) Length = 629 | Back alignment and structure |
| >pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna Synthetase Complexed With Trna(Arg) And An Atp Analog (Anp) Length = 629 | Back alignment and structure |
| >pdb|1IQ0|A Chain A, Thermus Thermophilus Arginyl-Trna Synthetase Length = 592 | Back alignment and structure |
| >pdb|1IQ0|A Chain A, Thermus Thermophilus Arginyl-Trna Synthetase Length = 592 | Back alignment and structure |
| >pdb|3FNR|A Chain A, Crystal Structure Of Putative Arginyl T-Rna Synthetase From Campylobacter Jejuni Length = 464 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Length = 607 | Back alignment and structure |
|---|
Score = 404 bits (1040), Expect = e-128
Identities = 104/434 (23%), Positives = 175/434 (40%), Gaps = 53/434 (12%)
Query: 183 SSSSSSQTKGTAKKMNVPVSDR-MSVRDYLSDVFTHAVQVAFP-ELGDKTASVASTNEKY 240
+ S + A+ S +++ D + + + + + ++ TN
Sbjct: 6 NMISQLKKLSIAEPAVAKDSHPDVNIVDLMRNYISQELSKISGVDSSLIFPALEWTNTM- 64
Query: 241 VHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAK 300
+ GD + + NP D+A A + ++K+E
Sbjct: 65 --ERGDLLIPIPRL-------RIKGANPKDLAVQWAE----KFPCGD----FLEKVEANG 107
Query: 301 PGFVNVFLSRVYAGEQIKDIIVN-----GVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLR 355
P F+ F + + + + I+ G NKK V+++FSSPNIAK H GHLR
Sbjct: 108 P-FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKK--VIIEFSSPNIAKPFHAGHLR 164
Query: 356 STIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFY 415
STIIG ++ L E LG +V+R+N++GDWG QFG+L + + PI L Y
Sbjct: 165 STIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDPIHHLFDVY 224
Query: 416 KESKKRFDE-------DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRL 468
K +E ++ +A + ++ D + K W+ + S + Y RL
Sbjct: 225 VRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARL 284
Query: 469 NVTLTE-RGES-FYQKHMEQLVPYLEKKGLLELDDGRKIMW--GEDRGSIPMTIVKSDGG 524
N+ GES ++ M + + ++KGL D G ++ ++ + KSDG
Sbjct: 285 NIKYDVYSGESQVSKESMLKAIDLFKEKGLTHEDKGAVLIDLTKFNKKLGKAIVQKSDGT 344
Query: 525 FTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEESTIIGDTISRLLEYLGHDVV 584
Y T D+ A R E+ D ++YV Q +H E I + + +
Sbjct: 345 TLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQFFE-------ILKQMGFE--WAK 395
Query: 585 RLNHVGDWGTQFGM 598
L HV FGM
Sbjct: 396 DLQHVN-----FGM 404
|
| >1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Length = 607 | Back alignment and structure |
|---|
| >1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Length = 607 | Back alignment and structure |
|---|
| >1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Length = 607 | Back alignment and structure |
|---|
| >2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Length = 629 | Back alignment and structure |
|---|
| >2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Length = 629 | Back alignment and structure |
|---|
| >2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Length = 629 | Back alignment and structure |
|---|
| >2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Length = 629 | Back alignment and structure |
|---|
| >1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Length = 592 | Back alignment and structure |
|---|
| >1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Length = 592 | Back alignment and structure |
|---|
| >1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Length = 592 | Back alignment and structure |
|---|
| >1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Length = 592 | Back alignment and structure |
|---|
| >1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Length = 592 | Back alignment and structure |
|---|
| >3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} Length = 109 | Back alignment and structure |
|---|
| >3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} Length = 109 | Back alignment and structure |
|---|
| >3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Length = 464 | Back alignment and structure |
|---|
| >3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Length = 464 | Back alignment and structure |
|---|
| >3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Length = 464 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1119 | |||
| 1f7u_A | 607 | Arginyl-tRNA synthetase; RNA-protein complex, amin | 100.0 | |
| 2zue_A | 629 | Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase | 100.0 | |
| 1iq0_A | 592 | Arginyl-tRNA synthetase; riken structural genomics | 100.0 | |
| 3fnr_A | 464 | Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX | 100.0 | |
| 1f7u_A | 607 | Arginyl-tRNA synthetase; RNA-protein complex, amin | 100.0 | |
| 2zue_A | 629 | Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase | 99.95 | |
| 3fnr_A | 464 | Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX | 99.94 | |
| 4dlp_A | 536 | Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA | 99.94 | |
| 3kfl_A | 564 | Methionyl-tRNA synthetase; parasite, aminoacyl-tRN | 99.92 | |
| 1iq0_A | 592 | Arginyl-tRNA synthetase; riken structural genomics | 99.92 | |
| 1li5_A | 461 | Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys | 99.92 | |
| 3h99_A | 560 | Methionyl-tRNA synthetase; rossmann fold, aminoacy | 99.9 | |
| 2csx_A | 497 | Methionyl-tRNA synthetase; ligase, riken structura | 99.86 | |
| 2d5b_A | 500 | Methionyl-tRNA synthetase; rossmann fold, class 1A | 99.84 | |
| 2x1l_A | 524 | Methionyl-tRNA synthetase; nucleotide-binding, pro | 99.84 | |
| 3gdz_A | 109 | Arginyl-tRNA synthetase; klebsiella pneumoniae sub | 99.82 | |
| 3gdz_A | 109 | Arginyl-tRNA synthetase; klebsiella pneumoniae sub | 99.79 | |
| 2o5r_A | 481 | Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g | 99.65 | |
| 3tqo_A | 462 | Cysteinyl-tRNA synthetase; protein synthesis, liga | 99.61 | |
| 3c8z_A | 414 | Cysteinyl-tRNA synthetase; cysteine ligase, rossma | 99.61 | |
| 1rqg_A | 722 | Methionyl-tRNA synthetase; translation, dimerizati | 99.58 | |
| 3al0_C | 592 | Glutamyl-tRNA(Gln) amidotransferase subunit C, GL | 99.45 | |
| 1ffy_A | 917 | Isoleucyl-tRNA synthetase; protein-RNA complex, me | 99.25 | |
| 1wkb_A | 810 | Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e | 99.23 | |
| 3u1f_A | 542 | Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta | 99.16 | |
| 3sp1_A | 501 | Cysteinyl-tRNA synthetase; structural genomics, se | 99.01 | |
| 1irx_A | 523 | Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin | 98.91 | |
| 1li5_A | 461 | Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys | 98.9 | |
| 3afh_A | 488 | Glutamyl-tRNA synthetase 2; protein-substrate comp | 98.88 | |
| 4arc_A | 880 | Leucine--tRNA ligase; ligase-RNA complex, nucleoti | 98.84 | |
| 1nzj_A | 298 | Hypothetical protein YADB; Zn cluster, glutamyl T- | 98.8 | |
| 2v0c_A | 878 | Aminoacyl-tRNA synthetase; ligase, nucleotide-bind | 98.69 | |
| 1ile_A | 821 | Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s | 98.65 | |
| 3c8z_A | 414 | Cysteinyl-tRNA synthetase; cysteine ligase, rossma | 98.5 | |
| 1gax_A | 862 | Valrs, valyl-tRNA synthetase; protein-RNA complex, | 98.42 | |
| 2ja2_A | 498 | Glutamyl-tRNA synthetase; non-discriminating gluta | 98.41 | |
| 4g6z_A | 490 | Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, | 98.37 | |
| 3kfl_A | 564 | Methionyl-tRNA synthetase; parasite, aminoacyl-tRN | 98.35 | |
| 4dlp_A | 536 | Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA | 98.35 | |
| 3tqo_A | 462 | Cysteinyl-tRNA synthetase; protein synthesis, liga | 98.35 | |
| 4gri_A | 512 | Glutamate--tRNA ligase; structural genomics, seatt | 98.24 | |
| 1j09_A | 468 | Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r | 98.21 | |
| 2x1l_A | 524 | Methionyl-tRNA synthetase; nucleotide-binding, pro | 98.18 | |
| 1wz2_A | 967 | Leucyl-tRNA synthetase; ligase, riken structural g | 98.13 | |
| 3sp1_A | 501 | Cysteinyl-tRNA synthetase; structural genomics, se | 98.09 | |
| 3h99_A | 560 | Methionyl-tRNA synthetase; rossmann fold, aminoacy | 97.96 | |
| 2d5b_A | 500 | Methionyl-tRNA synthetase; rossmann fold, class 1A | 97.95 | |
| 2cfo_A | 492 | Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s | 97.88 | |
| 2csx_A | 497 | Methionyl-tRNA synthetase; ligase, riken structura | 97.85 | |
| 1wkb_A | 810 | Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e | 97.62 | |
| 3al0_C | 592 | Glutamyl-tRNA(Gln) amidotransferase subunit C, GL | 97.22 | |
| 1irx_A | 523 | Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin | 97.06 | |
| 1rqg_A | 722 | Methionyl-tRNA synthetase; translation, dimerizati | 96.98 | |
| 2v0c_A | 878 | Aminoacyl-tRNA synthetase; ligase, nucleotide-bind | 96.91 | |
| 4arc_A | 880 | Leucine--tRNA ligase; ligase-RNA complex, nucleoti | 96.68 | |
| 3u1f_A | 542 | Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta | 96.44 | |
| 2o5r_A | 481 | Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g | 96.13 | |
| 1ile_A | 821 | Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s | 96.1 | |
| 1qtq_A | 553 | GLNRS, protein (glutaminyl-tRNA synthetase); gluta | 95.69 | |
| 2hz7_A | 851 | Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c | 95.35 | |
| 1nzj_A | 298 | Hypothetical protein YADB; Zn cluster, glutamyl T- | 95.34 | |
| 3aii_A | 553 | Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta | 95.22 | |
| 1gax_A | 862 | Valrs, valyl-tRNA synthetase; protein-RNA complex, | 94.08 | |
| 1ffy_A | 917 | Isoleucyl-tRNA synthetase; protein-RNA complex, me | 93.77 | |
| 1wz2_A | 967 | Leucyl-tRNA synthetase; ligase, riken structural g | 93.4 |
| >1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-110 Score=1009.43 Aligned_cols=586 Identities=26% Similarity=0.392 Sum_probs=493.3
Q ss_pred HHHHHHHHHcCCCCCccccccccccccccCCCccccHHHHHHHHHHHHHHHhcCcC-CCCcceEeecCcccccCCccchh
Q psy6783 171 KAIAEEEKKQGISSSSSSQTKGTAKKMNVPVSDRMSVRDYLSDVFTHAVQVAFPEL-GDKTASVASTNEKYVHKFGDFQC 249 (1119)
Q Consensus 171 d~lar~~~~~G~~v~~~~~~~~~~~~~~~~~~~~m~i~~~l~~~i~~al~~~~~~~-~~~~~~ve~p~~~~~~~~GD~at 249 (1119)
..|.-.|...|.+.. .+ + |...--|++.+.+++.|.+++.+++... ......|+.|+++ +||||++
T Consensus 5 ~~~~~~~~~~~~~~~--~~-~-------~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~v~~~~~~---~~GD~a~ 71 (607)
T 1f7u_A 5 ANMISQLKKLSIAEP--AV-A-------KDSHPDVNIVDLMRNYISQELSKISGVDSSLIFPALEWTNTM---ERGDLLI 71 (607)
T ss_dssp HHHHHHHHHCCCSCH--HH-H-------TTCCTTTCHHHHHHHHHHHHHHHHHCCCHHHHGGGCEECSSG---GGCSEEE
T ss_pred HHHHHHHHhCCCCCC--CC-C-------CCCCccccHHHHHHHHHHHHHHHHhCCCccccccceeCCCCC---CCCchhh
Confidence 456666777776441 11 1 1112235889999999999999886421 0123358889999 9999999
Q ss_pred chHHHHHHHhhccCCCCCHHHHHHHHHHhhcccccCCcccccceeeEEEeCCeEEEEEeCHHHHHH-HHHHHHHcCCCCC
Q psy6783 250 NDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGE-QIKDIIVNGVQPP 328 (1119)
Q Consensus 250 n~Am~lAK~~k~~~~~~~P~~IA~~i~~~l~~~l~~~~~~~~~ie~vevagpGFINf~L~~~~~~~-~l~~il~~g~~~~ 328 (1119)
|++| +|.+| +||++||++|++. |+.+ +.|++++++|| ||||+|+++++.+ ++..++..|..|+
T Consensus 72 ~~~~--~k~~~-----~~P~~iA~~i~~~----l~~~----~~i~~ve~ag~-fiN~~l~~~~~~~~~~~~i~~~~~~~G 135 (607)
T 1f7u_A 72 PIPR--LRIKG-----ANPKDLAVQWAEK----FPCG----DFLEKVEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYG 135 (607)
T ss_dssp EGGG--GCCTT-----CCHHHHHHHHHHT----CCCT----TTEEEEEEETT-EEEEEECHHHHHHHHHHHHHHHGGGTT
T ss_pred HHHH--HHhcC-----CCHHHHHHHHHHh----cccc----CceeEEEEcCC-EEEEEECHHHHHHHHHHHHHhhhhhcC
Confidence 9776 36664 8999999999999 7554 67999999996 9999999999986 6677778877776
Q ss_pred C--CCCCcEEEEEeeCCCCCCCccccccchhcHHHHHHHHHHHcCCcEEEecccCCchhHHHHHHHHHHhhcCCCC-CCC
Q psy6783 329 T--LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKS 405 (1119)
Q Consensus 329 ~--~~~~kkV~VEfsSpNptkpLHVGHlRsaiiGDsLaril~~~Gy~V~renyInD~G~Qi~~L~~~~~~r~~e~~-~~~ 405 (1119)
. .+++++|+||||||||||||||||+||+||||+|+|+|+++||+|+++|||||||+|||+|+.++ .++++.. ...
T Consensus 136 ~~~~~~~~~V~ve~~spN~~~plHvGHlRs~iiGD~laRil~~~G~~V~~~~~i~D~G~Q~~~l~~~~-~~~g~~~~~~~ 214 (607)
T 1f7u_A 136 SCKLVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGF-ERYGNEEALVK 214 (607)
T ss_dssp CCCCSSCCEEEEECCCCBTTSCCBGGGHHHHHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHH-HHHCCHHHHHH
T ss_pred CCcccCCCeEEEEecCCCCCCCCccchHHHHHHHHHHHHHHHHcCCCeeEEEeecCcchHHHHHHHHH-HHhCchhhccC
Confidence 3 46788999999999999999999999999999999999999999999999999999999999985 5555321 122
Q ss_pred CChHHHHHHHHHhcccCCCc-------HHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHhhcCcEEec-cch
Q psy6783 406 PPIADLQAFYKESKKRFDED-------EIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-RGE 477 (1119)
Q Consensus 406 ~~i~~l~~~y~~~~~~~~~d-------e~~~~~a~~~~~~le~gd~e~~~lW~~~~~~s~~~~~~~y~~l~i~f~~-~ge 477 (1119)
.++.++.++|+++++.++++ +.+.++|++.+.+||+||+++.++|++++++++++|+++|++|||+|+. .||
T Consensus 215 ~~i~~l~~~Y~~~~~~~~~~~e~g~~~~~i~~~A~~~~~~le~gd~e~~~~w~~~~~~~~~~~~~~~~~L~V~fD~~~~E 294 (607)
T 1f7u_A 215 DPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGE 294 (607)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTSSCHHHHSSHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEG
T ss_pred CChHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcceeecCc
Confidence 46888999999999988877 8899999999999999999999999999999999999999999999964 689
Q ss_pred hhhh-HHHHHHHHHHHHCCCeEeeCCCeEEEcCCC--CCCCeEEEecCCCcccchhhHHHHHHHhhhhCCCEEEEEeecC
Q psy6783 478 SFYQ-KHMEQLVPYLEKKGLLELDDGRKIMWGEDR--GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLG 554 (1119)
Q Consensus 478 S~y~-~~v~~vi~~L~~kG~~~e~dGA~~~~~ddk--d~~~~VL~KSDGt~tY~t~DIAy~~~R~~~~~~d~iIyVv~~~ 554 (1119)
|.|. +.++++++.|+++|++|++|||+|++.++. +..|+|++||||++||+|+|||||+||++++++|++|||||++
T Consensus 295 S~~~~~~~~~vi~~L~~kG~~ye~dGa~~~~~~~~g~~~d~~v~~KsDG~~~Y~t~Dia~~~~k~~~~~~d~~IyV~g~~ 374 (607)
T 1f7u_A 295 SQVSKESMLKAIDLFKEKGLTHEDKGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQ 374 (607)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEETTEEEEEGGGTCTTTCEEEEECTTSCCCHHHHHHHHHHHHHHHHCCSEEEEECCGG
T ss_pred chhhhhHHHHHHHHHHhCCCEEEECCcEEEEecccCCCCCceeEeccCCCcCCCCCcHHHHHHHHhhcCCCcEEEEEcCh
Confidence 9997 799999999999999999999999987643 3346899999999999999999999999889999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHcCCceeeecccCcchhhHHHHHHHHhhhcCCCCCCCCchhhHHHHHHHHhhhcCcc
Q psy6783 555 QGVHFRLLEESTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDED 634 (1119)
Q Consensus 555 Q~~H~~~~~RStIIG~~l~~l~~~~G~~V~r~NylGDwG~QfG~l~~g~~~~~~~~~~~~~~i~~L~~~Y~~~~~~~~~d 634 (1119)
|++||.|
T Consensus 375 q~~~f~q------------------------------------------------------------------------- 381 (607)
T 1f7u_A 375 QDLHAAQ------------------------------------------------------------------------- 381 (607)
T ss_dssp GHHHHHH-------------------------------------------------------------------------
T ss_pred HhhHHHH-------------------------------------------------------------------------
Confidence 9999987
Q ss_pred HHHHHHHHHHHHHhhcCChhHHHHHHHHHHhhHHHHHHHHHHhcccccccccchhhhhHHHHHHHHHhcCCeeeecCceE
Q psy6783 635 EIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGNLSLTKKLGI 714 (1119)
Q Consensus 635 ~~~~~~a~~~~~~le~gd~e~~~lW~~~rd~Si~~~~~~Y~rL~V~Fd~~gES~y~~~~~~vi~~l~~~g~~~~~~~~~~ 714 (1119)
T Consensus 382 -------------------------------------------------------------------------------- 381 (607)
T 1f7u_A 382 -------------------------------------------------------------------------------- 381 (607)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCcchhhHHHHHHHHHcCCCCCCCCCceeeeeeEEECCCCcccccccCCeeeHHHHHHHHHHHHHHHHHhccCCC
Q psy6783 715 VYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHT 794 (1119)
Q Consensus 715 v~v~d~~~~~h~~~l~~~~~~~g~~~~~~~~~~h~~fg~V~~~~~~~~str~G~~v~l~~ll~~~~~~~~~~l~~~~~~~ 794 (1119)
++++++.+|+. +...+.|++||+|. +||||.|++|+|+|+|+++..+|...+. ++.
T Consensus 382 --------------~~~~~~~lG~~--~~~~~~Hv~fg~v~-----kMSkR~G~~v~L~dLlde~~~~a~~~~~-~~~-- 437 (607)
T 1f7u_A 382 --------------FFEILKQMGFE--WAKDLQHVNFGMVQ-----GMSTRKGTVVFLDNILEETKEKMHEVMK-KNE-- 437 (607)
T ss_dssp --------------HHHHHHHTTCG--GGGGEEEECCCCEE-----SCCGGGTCCCBHHHHHHHHHHHHHHHHH-TCH--
T ss_pred --------------HHHHHHHcCCC--cCcEEEEecccccc-----cccCCCCCcccHHHHHHHHHHHHHHHHH-hCc--
Confidence 34455566762 33469999999996 4999999999999999998776644332 100
Q ss_pred CCChhhhHHHHHHhhhceeeeecccCCCCCcccccccccccccCCchhhhHHHHHHHHHHHHhhCCCCCCCCCCCCCCcc
Q psy6783 795 ELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDPPEPDPSQSE 874 (1119)
Q Consensus 795 ~~~~~~~~~~a~~v~~gaI~~~dl~~~r~~~y~F~~~~~~~~~g~t~~yl~y~~~rl~si~rk~g~~~~~~~~~~~~~~~ 874 (1119)
+. |
T Consensus 438 ----~~---------------------------------------------~---------------------------- 440 (607)
T 1f7u_A 438 ----NK---------------------------------------------Y---------------------------- 440 (607)
T ss_dssp ----HH---------------------------------------------H----------------------------
T ss_pred ----cc---------------------------------------------c----------------------------
Confidence 00 0
Q ss_pred cccccCCCCCcCCCCCCCchhHHHHHHhhhccccccccccccCccchhhhhhcchhhhhhHHhhhcccCCCCChhhhHHH
Q psy6783 875 VEDRCCPSHAKTHRKPPFTYTELIEQALKENGLCWVWRGVGRGQEEVQDSLRGYGLRRSLDKLKDKNRHTELTPTELSEA 954 (1119)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~e~~~~ 954 (1119)
.+.+|..++
T Consensus 441 -----------------------------------------------------------------------~~~~e~~~~ 449 (607)
T 1f7u_A 441 -----------------------------------------------------------------------AQIEHPEEV 449 (607)
T ss_dssp -----------------------------------------------------------------------TTCSCHHHH
T ss_pred -----------------------------------------------------------------------cchhhHHHH
Confidence 001345678
Q ss_pred HHHHhhhhhhhhhcccCCCCCcccchhhhccccCCchhHHHHHHHHHHHHHHHh-CCCcchhhhhccCCCCCCCCHHHHH
Q psy6783 955 QQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTA-GINSEDLRVAAQSTPVSLEHEKEFA 1033 (1119)
Q Consensus 955 ~~~v~~~ai~~~~L~~~r~~~~~Fd~d~~l~~~gnt~~YlQYahARi~SIlrKa-~~~~~~l~~~~~~~~~~L~~~~E~~ 1033 (1119)
+++||+|||+|+||++++.++|+|||++|++++|||||||||||||||||+||+ +.....+ ...+...|++++|++
T Consensus 450 a~~vgi~avry~~Ls~~~~s~~~Fd~d~~~~~~g~t~pylqYa~aRi~SIlrka~~~~~~~~---~~~~~~~l~~~~e~~ 526 (607)
T 1f7u_A 450 ADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGPYLQYAHSRLRSVERNASGITQEKW---INADFSLLKEPAAKL 526 (607)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCEECCHHHHHCCSSSSHHHHHHHHHHHHHHHHHTTTSCHHHH---TTSCGGGCCSHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCcccCHHHHHHHhccchHHHHHHHHHHHHHHHHhcCCCcccc---cccchhhcCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 4321111 112234577999999
Q ss_pred HHHHHHhhHHHHHHHHHhcchHHHHHHHHHHHHHHHhhhhcccccccCCccchhhhHhHHHHHHHHHHHHHHHHhhhcCC
Q psy6783 1034 LAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1113 (1119)
Q Consensus 1034 Li~~L~~fpevl~~Aa~~l~P~~L~~YL~~LA~~F~~FY~~~~VL~~~~~~~~~~~~~aRL~L~~at~~VL~~gL~LLGI 1113 (1119)
|++.|++||++|+.|+++++||+||+||++||++||+||++|||++++ .+++.+||+||.+|++||++||.||||
T Consensus 527 L~~~l~~fp~vv~~a~~~~~P~~l~~Yl~~La~~fn~fY~~~~Vl~~~-----~~~~~aRL~L~~a~~~vL~~gL~LLGI 601 (607)
T 1f7u_A 527 LIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYDVLWVAGQT-----EELATARLALYGAARQVLYNGMRLLGL 601 (607)
T ss_dssp HHHHHTTHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCSTTSC-----HHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999754 257889999999999999999999999
Q ss_pred CcCcCC
Q psy6783 1114 RTVHKM 1119 (1119)
Q Consensus 1114 ~~~erM 1119 (1119)
+|||||
T Consensus 602 ~~perM 607 (607)
T 1f7u_A 602 TPVERM 607 (607)
T ss_dssp CCCSCC
T ss_pred CccccC
Confidence 999999
|
| >2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A | Back alignment and structure |
|---|
| >1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 | Back alignment and structure |
|---|
| >3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} | Back alignment and structure |
|---|
| >1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* | Back alignment and structure |
|---|
| >2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A | Back alignment and structure |
|---|
| >3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} | Back alignment and structure |
|---|
| >4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} | Back alignment and structure |
|---|
| >3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} | Back alignment and structure |
|---|
| >1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 | Back alignment and structure |
|---|
| >1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B | Back alignment and structure |
|---|
| >3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A | Back alignment and structure |
|---|
| >2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* | Back alignment and structure |
|---|
| >2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A | Back alignment and structure |
|---|
| >2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* | Back alignment and structure |
|---|
| >3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} | Back alignment and structure |
|---|
| >3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
| >1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 | Back alignment and structure |
|---|
| >3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* | Back alignment and structure |
|---|
| >1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* | Back alignment and structure |
|---|
| >3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} | Back alignment and structure |
|---|
| >1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 | Back alignment and structure |
|---|
| >1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B | Back alignment and structure |
|---|
| >3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* | Back alignment and structure |
|---|
| >4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* | Back alignment and structure |
|---|
| >1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* | Back alignment and structure |
|---|
| >2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* | Back alignment and structure |
|---|
| >1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* | Back alignment and structure |
|---|
| >3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
| >1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A | Back alignment and structure |
|---|
| >2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A | Back alignment and structure |
|---|
| >4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} | Back alignment and structure |
|---|
| >4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} | Back alignment and structure |
|---|
| >3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} | Back alignment and structure |
|---|
| >4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} | Back alignment and structure |
|---|
| >1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A | Back alignment and structure |
|---|
| >2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* | Back alignment and structure |
|---|
| >1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} | Back alignment and structure |
|---|
| >3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A | Back alignment and structure |
|---|
| >2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A | Back alignment and structure |
|---|
| >2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} | Back alignment and structure |
|---|
| >2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* | Back alignment and structure |
|---|
| >1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 | Back alignment and structure |
|---|
| >1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 | Back alignment and structure |
|---|
| >2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* | Back alignment and structure |
|---|
| >4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* | Back alignment and structure |
|---|
| >3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* | Back alignment and structure |
|---|
| >2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* | Back alignment and structure |
|---|
| >1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A | Back alignment and structure |
|---|
| >2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* | Back alignment and structure |
|---|
| >3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} | Back alignment and structure |
|---|
| >1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A | Back alignment and structure |
|---|
| >1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* | Back alignment and structure |
|---|
| >1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1119 | ||||
| d1f7ua2 | 348 | c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgR | 2e-45 | |
| d1f7ua2 | 348 | c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgR | 1e-42 | |
| d1f7ua2 | 348 | c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgR | 2e-10 | |
| d1iq0a2 | 370 | c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS | 5e-39 | |
| d1iq0a2 | 370 | c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS | 1e-22 | |
| d1iq0a2 | 370 | c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS | 2e-18 | |
| d1f7ua1 | 124 | a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgR | 2e-25 | |
| d1f7ua1 | 124 | a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgR | 1e-04 | |
| d1iq0a1 | 126 | a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgR | 6e-24 | |
| d1iq0a1 | 126 | a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgR | 1e-05 | |
| d1irxa2 | 317 | c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { | 8e-10 | |
| d1irxa2 | 317 | c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { | 7e-04 | |
| d1iq0a3 | 96 | d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), | 6e-08 | |
| d1iq0a3 | 96 | d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), | 2e-07 | |
| d1li5a2 | 315 | c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR | 3e-07 | |
| d1li5a2 | 315 | c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR | 3e-04 | |
| d1ivsa4 | 425 | c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase | 4e-06 | |
| d2d5ba2 | 348 | c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR | 3e-05 | |
| d1pfva2 | 350 | c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe | 1e-04 | |
| d1f7ua3 | 134 | d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS) | 2e-04 | |
| d1f7ua3 | 134 | d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS) | 0.001 | |
| d1ilea3 | 452 | c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe | 5e-04 | |
| d1rqga2 | 361 | c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe | 7e-04 |
| >d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Arginyl-tRNA synthetase (ArgRS) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 165 bits (417), Expect = 2e-45
Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 21/280 (7%)
Query: 330 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 389
L + +V+++FSSPNIAK H GHLRSTIIG ++ L E LG +V+R+N++GDWG QFG+
Sbjct: 4 LVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGL 63
Query: 390 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDED-------EIFKKRAYQCVVALQRF 442
L + + PI L Y K +E+ + +A + ++
Sbjct: 64 LAVGFERYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDG 123
Query: 443 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH--MEQLVPYLEKKGLLELD 500
D + K W+ + S + Y RLN+ M + + ++KGL D
Sbjct: 124 DEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVSKESMLKAIDLFKEKGLTHED 183
Query: 501 DGRKIMWGEDRGSIP--MTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 558
G ++ + KSDG Y T D+ A R E+ D ++YV Q +H
Sbjct: 184 KGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLH 243
Query: 559 FRLLEESTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 598
E + +G + + ++G GM
Sbjct: 244 AAQFFEIL----------KQMGFEWAKDLQHVNFGMVQGM 273
|
| >d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 348 | Back information, alignment and structure |
|---|
| >d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 348 | Back information, alignment and structure |
|---|
| >d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 370 | Back information, alignment and structure |
|---|
| >d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 370 | Back information, alignment and structure |
|---|
| >d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 370 | Back information, alignment and structure |
|---|
| >d1f7ua1 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 | Back information, alignment and structure |
|---|
| >d1f7ua1 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 | Back information, alignment and structure |
|---|
| >d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 126 | Back information, alignment and structure |
|---|
| >d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 126 | Back information, alignment and structure |
|---|
| >d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 | Back information, alignment and structure |
|---|
| >d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 | Back information, alignment and structure |
|---|
| >d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} Length = 96 | Back information, alignment and structure |
|---|
| >d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} Length = 96 | Back information, alignment and structure |
|---|
| >d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
| >d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
| >d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 | Back information, alignment and structure |
|---|
| >d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 | Back information, alignment and structure |
|---|
| >d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 | Back information, alignment and structure |
|---|
| >d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 | Back information, alignment and structure |
|---|
| >d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 | Back information, alignment and structure |
|---|
| >d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 | Back information, alignment and structure |
|---|
| >d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1119 | |||
| d1f7ua2 | 348 | Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa | 100.0 | |
| d1iq0a2 | 370 | Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi | 100.0 | |
| d1f7ua2 | 348 | Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa | 100.0 | |
| d1iq0a2 | 370 | Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi | 100.0 | |
| d1f7ua1 | 124 | Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa | 99.98 | |
| d1iq0a1 | 126 | Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi | 99.97 | |
| d1irxa2 | 317 | Class I lysyl-tRNA synthetase {Archaeon Pyrococcus | 99.72 | |
| d1li5a2 | 315 | Cysteinyl-tRNA synthetase (CysRS) {Escherichia col | 99.68 | |
| d1iq0a3 | 96 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'addit | 99.63 | |
| d1iq0a3 | 96 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'addit | 99.58 | |
| d1f7ua3 | 134 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'addit | 99.36 | |
| d1f7ua3 | 134 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'addit | 99.35 | |
| d2d5ba2 | 348 | Methionyl-tRNA synthetase (MetRS) {Thermus thermop | 99.28 | |
| d1ivsa4 | 425 | Valyl-tRNA synthetase (ValRS) {Thermus thermophilu | 99.08 | |
| d1pfva2 | 350 | Methionyl-tRNA synthetase (MetRS) {Escherichia col | 98.99 | |
| d1ilea3 | 452 | Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop | 98.73 | |
| d1ffya3 | 450 | Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus | 98.52 | |
| d1irxa2 | 317 | Class I lysyl-tRNA synthetase {Archaeon Pyrococcus | 98.44 | |
| d1rqga2 | 361 | Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys | 98.42 | |
| d1li5a2 | 315 | Cysteinyl-tRNA synthetase (CysRS) {Escherichia col | 98.18 | |
| d1h3na3 | 494 | Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil | 98.01 | |
| d1j09a2 | 305 | Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph | 97.88 | |
| d1nzja_ | 286 | Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c | 97.43 | |
| d1ffya3 | 450 | Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus | 97.42 | |
| d1iq0a1 | 126 | Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi | 97.29 | |
| d2d5ba2 | 348 | Methionyl-tRNA synthetase (MetRS) {Thermus thermop | 97.28 | |
| d1pfva2 | 350 | Methionyl-tRNA synthetase (MetRS) {Escherichia col | 96.94 | |
| d1ivsa4 | 425 | Valyl-tRNA synthetase (ValRS) {Thermus thermophilu | 96.93 | |
| d1f7ua1 | 124 | Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa | 96.92 | |
| d1gtra2 | 331 | Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co | 96.49 | |
| d1rqga2 | 361 | Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys | 96.08 | |
| d1ilea3 | 452 | Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop | 95.6 | |
| d1h3na3 | 494 | Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil | 82.51 |
| >d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Arginyl-tRNA synthetase (ArgRS) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.4e-68 Score=607.51 Aligned_cols=334 Identities=29% Similarity=0.433 Sum_probs=284.2
Q ss_pred CCCCcEEEEEeeCCCCCCCccccccchhcHHHHHHHHHHHcCCcEEEecccCCchhHHHHHHHHHHhhcCCCCCCCCChH
Q psy6783 330 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA 409 (1119)
Q Consensus 330 ~~~~kkV~VEfsSpNptkpLHVGHlRsaiiGDsLaril~~~Gy~V~renyInD~G~Qi~~L~~~~~~r~~e~~~~~~~i~ 409 (1119)
+++++||+||||||||||||||||+|||||||+|||||+++||+|+|+|||||||+||++|+.++.....+......++.
T Consensus 4 ~~~~kki~vE~~SaNpt~plHvGH~R~aiiGd~larlL~~~G~~V~re~yvnD~G~Qi~~l~~~~~~~~~~~~~~~~~~~ 83 (348)
T d1f7ua2 4 LVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDPIH 83 (348)
T ss_dssp CSSCCEEEEECCCCBTTSCCBGGGHHHHHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHHHHCCHHHHHHCHHH
T ss_pred CCCCCEEEEEecCCCCCCCcchhhhhhHHHHHHHHHHHHHCCCeEEEEEEECCchHHHHHHHHHHHHhccccccccccch
Confidence 57899999999999999999999999999999999999999999999999999999999999998654332222234556
Q ss_pred HHHHHHHHhcccCC-------CcHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHhhcCcEEec-cchh-hh
Q psy6783 410 DLQAFYKESKKRFD-------EDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-RGES-FY 480 (1119)
Q Consensus 410 ~l~~~y~~~~~~~~-------~de~~~~~a~~~~~~le~gd~e~~~lW~~~~~~s~~~~~~~y~~l~i~f~~-~geS-~y 480 (1119)
++.++|...++.++ ..+.+.+++.+.+.+++.+|+++.++|+.+++++++++.++|.+||+.|+. .+|| ++
T Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~l~~~~~~~~~l~i~fD~~~~Es~~~ 163 (348)
T d1f7ua2 84 HLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVS 163 (348)
T ss_dssp HHHHHHHHHHHHHHHSTTSSCHHHHSSHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEGGGCC
T ss_pred hHHHHHHHHHhhhcccchhhhhhhhhHhHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccc
Confidence 77777776554332 245688889999999999999999999999999999999999999999874 4555 55
Q ss_pred hHHHHHHHHHHHHCCCeEeeCCCeEEEcCCC--CCCCeEEEecCCCcccchhhHHHHHHHhhhhCCCEEEEEeecCcccc
Q psy6783 481 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDR--GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 558 (1119)
Q Consensus 481 ~~~v~~vi~~L~~kG~~~e~dGA~~~~~ddk--d~~~~VL~KSDGt~tY~t~DIAy~~~R~~~~~~d~iIyVv~~~Q~~H 558 (1119)
.+...++++.|+++|++++++||+|.+..+. +..++||+||||++||+|+|||||.+|+++++||++|||||++|..|
T Consensus 164 ~~~~~~v~~~L~~~~~~~~~~ga~~~~~~~~g~~~~~~vl~ksDG~~tY~t~DiAy~~~K~~~~~~D~~I~V~g~dq~~~ 243 (348)
T d1f7ua2 164 KESMLKAIDLFKEKGLTHEDKGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLH 243 (348)
T ss_dssp HHHHHHHHHHHHHTTCEEEETTEEEEEGGGTCTTTCEEEEECTTSCCCHHHHHHHHHHHHHHHHCCSEEEEECCGGGHHH
T ss_pred ccchHHHHHHHHhhccccccCCcccccchhhccccccceeccCCCccceecchHHhhhhhhhccCCCEEEEecccccchh
Confidence 6667789999999999999999999876432 22346789999999999999999999999889999999999999988
Q ss_pred hhhhhhhhhhHHHHHHHHHHcCCceeeecccCcchhhHHHHHHHHhhhcCCCCCCCCchhhHHHHHHHHhhhcCccHHHH
Q psy6783 559 FRLLEESTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFK 638 (1119)
Q Consensus 559 ~~~~~RStIIG~~l~~l~~~~G~~V~r~NylGDwG~QfG~l~~g~~~~~~~~~~~~~~i~~L~~~Y~~~~~~~~~d~~~~ 638 (1119)
+.++
T Consensus 244 ~~~l---------------------------------------------------------------------------- 247 (348)
T d1f7ua2 244 AAQF---------------------------------------------------------------------------- 247 (348)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred hhhH----------------------------------------------------------------------------
Confidence 8873
Q ss_pred HHHHHHHHHhhcCChhHHHHHHHHHHhhHHHHHHHHHHhcccccccccchhhhhHHHHHHHHHhcCCeeeecCceEEEEe
Q psy6783 639 KRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGNLSLTKKLGIVYVT 718 (1119)
Q Consensus 639 ~~a~~~~~~le~gd~e~~~lW~~~rd~Si~~~~~~Y~rL~V~Fd~~gES~y~~~~~~vi~~l~~~g~~~~~~~~~~v~v~ 718 (1119)
T Consensus 248 -------------------------------------------------------------------------------- 247 (348)
T d1f7ua2 248 -------------------------------------------------------------------------------- 247 (348)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcchhhHHHHHHHHHcCCCCCCCCCceeeeeeEEECCCCcccccccCCeeeHHHHHHHHHHHHHHHHHhccCCCCCCh
Q psy6783 719 DLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTP 798 (1119)
Q Consensus 719 d~~~~~h~~~l~~~~~~~g~~~~~~~~~~h~~fg~V~~~~~~~~str~G~~v~l~~ll~~~~~~~~~~l~~~~~~~~~~~ 798 (1119)
+++++.+|+. ....+.|+.||+|. +||||+|++|+|+|||+++.+++.+.++++. ....+.
T Consensus 248 -----------~~~l~~lg~~--~~~~~~h~~~g~v~-----kMStR~G~~i~l~dll~e~~~~a~~~~~~~~-~~~~~~ 308 (348)
T d1f7ua2 248 -----------FEILKQMGFE--WAKDLQHVNFGMVQ-----GMSTRKGTVVFLDNILEETKEKMHEVMKKNE-NKYAQI 308 (348)
T ss_dssp -----------HHHHHHTTCG--GGGGEEEECCCCEE-----SCCGGGTCCCBHHHHHHHHHHHHHHHHHTCH-HHHTTC
T ss_pred -----------HHHHHHhCCC--cccceeeecCCccc-----cccccCCCceEHHHHHHHHHHHHHHHHHhcc-CcCCCh
Confidence 3444555542 12368999999995 6999999999999999999999998887643 233455
Q ss_pred hhhHHHHHHhhhceeeeecccCCCCCcccccccccccccC
Q psy6783 799 TELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 838 (1119)
Q Consensus 799 ~~~~~~a~~v~~gaI~~~dl~~~r~~~y~F~~~~~~~~~g 838 (1119)
++.+++|+.||+|||+|.||+.+|.++|+|||++|++|+|
T Consensus 309 ~~~~~ia~~vgv~ai~y~~L~~~~~~~~~Fd~d~~l~~eG 348 (348)
T d1f7ua2 309 EHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEG 348 (348)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSSCTTCCEECCHHHHHCCSS
T ss_pred hhHHHHHHHhhHHheehhhhhcCCCCCCEECHHHhcCCCC
Confidence 6788999999999999999999999999999999999997
|
| >d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1f7ua1 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
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| >d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1f7ua1 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
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| >d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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