Psyllid ID: psy6841

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110---
Protein Sequence
MGQQFPTSDGSELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG
Secondary Structure (PSIPRED)
ccccccccccEEEEEEEccccccccHHHHHHHcccccccccccccccccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEEEcccccccccHHHHHHHccccccHHccccccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mgqqfptsdgsellvyyprrhrkhsmSEFLNDmaddadtdghrpvvsghnrlyhhtitclpvlpkemdqdsddqkdpkwLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG
Flexible Loop (DISEMBL)
mgqqfptsdgselLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWnlhvmkyg
Low Complexity Region (SEG)
MGQQFPTSDGSELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG
Disordered region (IsUnstruct)
*************LVYY***************************VVSGHNRLYHHTITCLPVL**********************MMIDEFTDVNEGEKELMKLWNLHVM***
Disordered Region (DISOPRED)
******TSDGSELLVYYPRRHR**********************VVSGHNRLYHHTITCLP****************KWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKY*
Disordered Region (DISEMBL)
*********GSELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKE**********PKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG
Disordered Region (DISPRO)
****FPTSDGSELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGQQFPTSDGSELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	113	2.2.26 [Sep-21-2011]
Q9NJG9	900	Polycomb protein Su(z)12	yes	N/A	0.884	0.111	0.592	6e-29
Q0VA03	700	Polycomb protein suz12 OS	yes	N/A	0.867	0.14	0.594	1e-28
Q80U70	741	Polycomb protein Suz12 OS	yes	N/A	0.867	0.132	0.594	1e-28
Q15022	739	Polycomb protein SUZ12 OS	yes	N/A	0.867	0.132	0.594	1e-28
B0R1D5	682	Polycomb protein suz12-B	yes	N/A	0.867	0.143	0.584	2e-28
Q6DC03	657	Polycomb protein suz12-A	no	N/A	0.884	0.152	0.553	4e-27

>sp|Q9NJG9|SUZ12_DROME Polycomb protein Su(z)12 OS=Drosophila melanogaster GN=Su(z)12 PE=1 SV=1

 Score =  125 bits (315), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 61/103 (59%), Positives = 75/103 (72%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + L+V  PRR  K  + EFL    D+ +    R  ++GHNRLYHHT TCLPV PKE+D D
Sbjct: 490 TSLMVCRPRRQ-KTCLDEFLE--LDEDEISNQRSYITGHNRLYHHTETCLPVHPKELDID 546

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DP WL+ KT  MIDEF+DVNEGEKELMKLWNLHVM++G
Sbjct: 547 SEGESDPLWLRQKTIQMIDEFSDVNEGEKELMKLWNLHVMRHG 589

Polycomb group (PcG) protein. While PcG proteins are generally required to maintain the transcriptionally repressive state of homeotic genes throughout development, this protein is specifically required during the first 6 hours of embryogenesis to establish the repressed state. Component of the Esc/E(z) complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. The Esc/E(z) complex is necessary but not sufficient for the repression of homeotic target genes, suggesting that the recruitment of the distinct PRC1 complex is also required.
Drosophila melanogaster (taxid: 7227)

>sp|Q0VA03|SUZ12_XENTR Polycomb protein suz12 OS=Xenopus tropicalis GN=suz12 PE=2 SV=1

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 3/101 (2%)

Query: 13  LLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSD 72
           +LV  P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EMD DS+
Sbjct: 485 ILVCRPKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMDVDSE 541

Query: 73  DQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           D+KDP+WL+ KT   I+EF+DVNEGEKE+MK+WNLHVMK+G
Sbjct: 542 DEKDPEWLREKTITQIEEFSDVNEGEKEVMKMWNLHVMKHG 582

Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene.

Xenopus tropicalis (taxid: 8364)

>sp|Q80U70|SUZ12_MOUSE Polycomb protein Suz12 OS=Mus musculus GN=Suz12 PE=1 SV=2

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 3/101 (2%)

Query: 13  LLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSD 72
           +LV  P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+
Sbjct: 530 ILVCRPKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSE 586

Query: 73  DQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           D+KDP+WL+ KT   I+EF+DVNEGEKE+MKLWNLHVMK+G
Sbjct: 587 DEKDPEWLREKTITQIEEFSDVNEGEKEVMKLWNLHVMKHG 627

Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems (By similarity). Genes repressed by the PRC2/EED-EZH2 complex include HOXA7, HOXB6 and HOXC8.

Mus musculus (taxid: 10090)

>sp|Q15022|SUZ12_HUMAN Polycomb protein SUZ12 OS=Homo sapiens GN=SUZ12 PE=1 SV=3

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 3/101 (2%)

Query: 13  LLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSD 72
           +LV  P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+
Sbjct: 528 ILVCRPKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSE 584

Query: 73  DQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           D+KDP+WL+ KT   I+EF+DVNEGEKE+MKLWNLHVMK+G
Sbjct: 585 DEKDPEWLREKTITQIEEFSDVNEGEKEVMKLWNLHVMKHG 625

Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems. Genes repressed by the PRC2/EED-EZH2 complex include HOXC8, HOXA9, MYT1 and CDKN2A.

Homo sapiens (taxid: 9606)

>sp|B0R1D5|SZ12B_DANRE Polycomb protein suz12-B OS=Danio rerio GN=suz12b PE=2 SV=1

 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 78/101 (77%), Gaps = 3/101 (2%)

Query: 13  LLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSD 72
           +LV  P+R  K S+SEFL   ++D + +  R  VSGHNRLY H+ +C+P+ P+EM+ DS+
Sbjct: 488 ILVCRPKR-TKPSLSEFLE--SEDGEPEQQRTYVSGHNRLYFHSDSCMPLRPQEMEVDSE 544

Query: 73  DQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           D++DP+WLQ KT   I+EFTDVNEGEKE+MKLWNLHVMK G
Sbjct: 545 DERDPEWLQEKTTTQIEEFTDVNEGEKEVMKLWNLHVMKNG 585

Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene.

Danio rerio (taxid: 7955)

>sp|Q6DC03|SZ12A_DANRE Polycomb protein suz12-A OS=Danio rerio GN=suz12a PE=2 SV=1

 Score =  120 bits (300), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/103 (55%), Positives = 78/103 (75%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           +++LV  P+R  K S+SEFL    +D + +  R  +SGHNRLY H+ +C P+ P+EM+ D
Sbjct: 491 TQILVCRPKRS-KPSLSEFLE--PEDGEQEQQRTYISGHNRLYFHSDSCTPLRPQEMEVD 547

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+D++DP WL+ KT M I+EFTDVNEGEKE+MKLWNL VMK+G
Sbjct: 548 SEDERDPDWLREKTAMQIEEFTDVNEGEKEIMKLWNLLVMKHG 590

Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
91079060	673	PREDICTED: similar to Polycomb protein S	0.884	0.148	0.669	5e-34
380017821	690	PREDICTED: LOW QUALITY PROTEIN: polycomb	0.884	0.144	0.660	1e-33
328790448	692	PREDICTED: polycomb protein suz12-B [Api	0.884	0.144	0.660	1e-33
350396035	747	PREDICTED: polycomb protein Suz12-like [	0.884	0.133	0.660	3e-33
307165851	848	Polycomb protein Suz12 [Camponotus flori	0.884	0.117	0.660	3e-33
340730105	745	PREDICTED: polycomb protein Suz12-like [	0.884	0.134	0.660	3e-33
242008928	695	Polycomb protein Su, putative [Pediculus	0.884	0.143	0.679	3e-33
383862836	857	PREDICTED: polycomb protein suz12-B-like	0.884	0.116	0.650	7e-33
332030561	735	Polycomb protein SUZ12 [Acromyrmex echin	0.884	0.136	0.650	2e-32
322790918	284	hypothetical protein SINV_14717 [Solenop	0.884	0.352	0.650	2e-32

>gi|91079060|ref|XP_975158.1| PREDICTED: similar to Polycomb protein Suz12 (Suppressor of zeste 12 protein homolog) [Tribolium castaneum] gi|270004197|gb|EFA00645.1| hypothetical protein TcasGA2_TC003521 [Tribolium castaneum]

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 69/103 (66%), Positives = 83/103 (80%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + +LV +P+R  K S+SEFL    DD + DG RP ++GHNRLYHHT TCLP+ PKEMD D
Sbjct: 427 THILVCHPKRA-KPSLSEFLE--LDDCEYDGQRPFITGHNRLYHHTTTCLPIYPKEMDVD 483

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DP+WL+ KT MMIDEFTDVNEGEKELMK+WNLHVMKYG
Sbjct: 484 SEGENDPEWLRNKTMMMIDEFTDVNEGEKELMKMWNLHVMKYG 526

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017821|ref|XP_003692843.1| PREDICTED: LOW QUALITY PROTEIN: polycomb protein suz12-B-like [Apis florea]

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 84/103 (81%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + +LV  P+R  K S+SEFL    D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD D
Sbjct: 474 TNILVCRPKR-TKPSLSEFLE--LDENEYESQRPYITGHNRLYHHTVTCLPIYPKEMDID 530

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DPKWLQTKT+MMID+FTDVNEGEKELMK+WNLHVMKYG
Sbjct: 531 SEGENDPKWLQTKTRMMIDDFTDVNEGEKELMKMWNLHVMKYG 573

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328790448|ref|XP_392695.3| PREDICTED: polycomb protein suz12-B [Apis mellifera]

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 84/103 (81%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + +LV  P+R  K S+SEFL    D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD D
Sbjct: 476 TNILVCRPKR-TKPSLSEFLE--LDENEYESQRPYITGHNRLYHHTVTCLPIYPKEMDID 532

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DPKWLQTKT+MMID+FTDVNEGEKELMK+WNLHVMKYG
Sbjct: 533 SEGENDPKWLQTKTRMMIDDFTDVNEGEKELMKMWNLHVMKYG 575

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350396035|ref|XP_003484416.1| PREDICTED: polycomb protein Suz12-like [Bombus impatiens]

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 83/103 (80%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + +LV  P+R  K S+SEFL    D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD D
Sbjct: 486 TNILVCRPKR-TKPSLSEFLE--LDENEYESQRPYITGHNRLYHHTVTCLPIYPKEMDID 542

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DPKWLQTKT MMID+FTDVNEGEKELMK+WNLHVMKYG
Sbjct: 543 SEGENDPKWLQTKTMMMIDDFTDVNEGEKELMKMWNLHVMKYG 585

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307165851|gb|EFN60214.1| Polycomb protein Suz12 [Camponotus floridanus]

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 83/103 (80%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + +LV  P+R  K S+SEFL    D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD D
Sbjct: 481 TNILVCRPKRT-KPSLSEFLE--LDENEFESQRPYITGHNRLYHHTVTCLPIYPKEMDID 537

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DPKWLQTKT MMID+FTDVNEGEKELMK+WNLHVMKYG
Sbjct: 538 SEGENDPKWLQTKTMMMIDDFTDVNEGEKELMKMWNLHVMKYG 580

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340730105|ref|XP_003403327.1| PREDICTED: polycomb protein Suz12-like [Bombus terrestris]

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 83/103 (80%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + +LV  P+R  K S+SEFL    D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD D
Sbjct: 484 TNILVCRPKR-TKPSLSEFLE--LDENEYESQRPYITGHNRLYHHTVTCLPIYPKEMDID 540

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DPKWLQTKT MMID+FTDVNEGEKELMK+WNLHVMKYG
Sbjct: 541 SEGENDPKWLQTKTMMMIDDFTDVNEGEKELMKMWNLHVMKYG 583

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242008928|ref|XP_002425246.1| Polycomb protein Su, putative [Pediculus humanus corporis] gi|212508994|gb|EEB12508.1| Polycomb protein Su, putative [Pediculus humanus corporis]

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 70/103 (67%), Positives = 82/103 (79%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + +LV  P+R R  S+SEFL    ++ D DG RP ++GHNRLYHHT TCLPV PKEMD D
Sbjct: 444 TNILVCRPKRQRP-SLSEFLE--LEENDFDGQRPYITGHNRLYHHTTTCLPVYPKEMDID 500

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DPKWLQ KT MMID+FTDVNEGEKELMKLWNLHVMK+G
Sbjct: 501 SEGENDPKWLQQKTIMMIDDFTDVNEGEKELMKLWNLHVMKHG 543

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862836|ref|XP_003706889.1| PREDICTED: polycomb protein suz12-B-like [Megachile rotundata]

 Score =  144 bits (363), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 67/103 (65%), Positives = 83/103 (80%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + +LV  P+R  K S+SEFL    D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD D
Sbjct: 475 TNILVCRPKR-TKPSLSEFLE--LDENEYESQRPYITGHNRLYHHTVTCLPIYPKEMDID 531

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DPKWLQTKT MMID+FTDVNEGEKELMK+WNLHVMK+G
Sbjct: 532 SEGENDPKWLQTKTMMMIDDFTDVNEGEKELMKMWNLHVMKHG 574

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030561|gb|EGI70249.1| Polycomb protein SUZ12 [Acromyrmex echinatior]

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/103 (65%), Positives = 83/103 (80%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + +LV  P+R  K S+SEFL    D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD D
Sbjct: 481 TNILVCRPKR-TKPSLSEFLE--LDENEFESQRPYITGHNRLYHHTVTCLPIYPKEMDID 537

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DPKWLQTKT MMID+FTDVNEGEKELMK+WNLHVMK+G
Sbjct: 538 SEGENDPKWLQTKTMMMIDDFTDVNEGEKELMKMWNLHVMKHG 580

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790918|gb|EFZ15584.1| hypothetical protein SINV_14717 [Solenopsis invicta]

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/103 (65%), Positives = 83/103 (80%), Gaps = 3/103 (2%)

Query: 11  SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
           + +LV  P+R  K S+SEFL    D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD D
Sbjct: 50  TNILVCRPKR-TKPSLSEFLE--LDENEFESQRPYITGHNRLYHHTVTCLPIYPKEMDID 106

Query: 71  SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
           S+ + DPKWLQTKT MMID+FTDVNEGEKELMK+WNLHVMK+G
Sbjct: 107 SEGENDPKWLQTKTMMMIDDFTDVNEGEKELMKMWNLHVMKHG 149

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
UNIPROTKB|Q0VA03	700	suz12 "Polycomb protein suz12"	0.884	0.142	0.582	1.2e-27
FB|FBgn0020887	900	Su(z)12 "Su(z)12" [Drosophila	0.884	0.111	0.592	1.3e-27
UNIPROTKB|F1PLK9	664	SUZ12 "Uncharacterized protein	0.884	0.150	0.582	1.7e-27
UNIPROTKB|J3QQW9	716	SUZ12 "Polycomb protein SUZ12"	0.884	0.139	0.582	2.1e-27
UNIPROTKB|F1RKV6	737	SUZ12 "Uncharacterized protein	0.884	0.135	0.582	2.2e-27
UNIPROTKB|F1NLE8	739	SUZ12 "Uncharacterized protein	0.884	0.135	0.582	2.2e-27
UNIPROTKB|Q15022	739	SUZ12 "Polycomb protein SUZ12"	0.884	0.135	0.582	2.2e-27
MGI|MGI:1261758	741	Suz12 "suppressor of zeste 12	0.884	0.134	0.582	2.3e-27
ZFIN|ZDB-GENE-030131-3255	682	suz12b "suppressor of zeste 12	0.884	0.146	0.572	2.4e-27
UNIPROTKB|E1B9T7	740	SUZ12 "Uncharacterized protein	0.823	0.125	0.604	1.3e-26

UNIPROTKB|Q0VA03 suz12 "Polycomb protein suz12" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 318 (117.0 bits), Expect = 1.2e-27, P = 1.2e-27
 Identities = 60/103 (58%), Positives = 79/103 (76%)

Query:    11 SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
             + +LV  P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EMD D
Sbjct:   483 THILVCRPKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMDVD 539

Query:    71 SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
             S+D+KDP+WL+ KT   I+EF+DVNEGEKE+MK+WNLHVMK+G
Sbjct:   540 SEDEKDPEWLREKTITQIEEFSDVNEGEKEVMKMWNLHVMKHG 582

GO:0035098 "ESC/E(Z) complex" evidence=ISS

FB|FBgn0020887 Su(z)12 "Su(z)12" [Drosophila melanogaster (taxid:7227)]

 Score = 320 (117.7 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 61/103 (59%), Positives = 76/103 (73%)

Query:    11 SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
             + L+V  PRR +K  + EFL    D+ +    R  ++GHNRLYHHT TCLPV PKE+D D
Sbjct:   490 TSLMVCRPRR-QKTCLDEFLE--LDEDEISNQRSYITGHNRLYHHTETCLPVHPKELDID 546

Query:    71 SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
             S+ + DP WL+ KT  MIDEF+DVNEGEKELMKLWNLHVM++G
Sbjct:   547 SEGESDPLWLRQKTIQMIDEFSDVNEGEKELMKLWNLHVMRHG 589

GO:0035098 "ESC/E(Z) complex" evidence=IDA

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0016571 "histone methylation" evidence=IDA

GO:0046976 "histone methyltransferase activity (H3-K27 specific)" evidence=IC

GO:0005515 "protein binding" evidence=IPI

GO:0005704 "polytene chromosome band" evidence=NAS

GO:0008283 "cell proliferation" evidence=NAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0031491 "nucleosome binding" evidence=IDA

GO:0035097 "histone methyltransferase complex" evidence=IDA

GO:0042054 "histone methyltransferase activity" evidence=IDA

GO:0007517 "muscle organ development" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0048666 "neuron development" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

GO:2001229 "negative regulation of response to gamma radiation" evidence=IMP

UNIPROTKB|F1PLK9 SUZ12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 316 (116.3 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/103 (58%), Positives = 79/103 (76%)

Query:    11 SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
             + +LV  P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ D
Sbjct:   451 THILVCRPKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVD 507

Query:    71 SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
             S+D+KDP+WL+ KT   I+EF+DVNEGEKE+MKLWNLHVMK+G
Sbjct:   508 SEDEKDPEWLREKTITQIEEFSDVNEGEKEVMKLWNLHVMKHG 550

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=IEA

GO:0035064 "methylated histone residue binding" evidence=IEA

GO:0016574 "histone ubiquitination" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J3QQW9 SUZ12 "Polycomb protein SUZ12" [Homo sapiens (taxid:9606)]

 Score = 316 (116.3 bits), Expect = 2.1e-27, P = 2.1e-27
 Identities = 60/103 (58%), Positives = 79/103 (76%)

Query:    11 SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
             + +LV  P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ D
Sbjct:   503 THILVCRPKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVD 559

Query:    71 SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
             S+D+KDP+WL+ KT   I+EF+DVNEGEKE+MKLWNLHVMK+G
Sbjct:   560 SEDEKDPEWLREKTITQIEEFSDVNEGEKEVMKLWNLHVMKHG 602

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1RKV6 SUZ12 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 316 (116.3 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 60/103 (58%), Positives = 79/103 (76%)

Query:    11 SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
             + +LV  P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ D
Sbjct:   524 THILVCRPKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVD 580

Query:    71 SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
             S+D+KDP+WL+ KT   I+EF+DVNEGEKE+MKLWNLHVMK+G
Sbjct:   581 SEDEKDPEWLREKTITQIEEFSDVNEGEKEVMKLWNLHVMKHG 623

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=IEA

GO:0035064 "methylated histone residue binding" evidence=IEA

GO:0016574 "histone ubiquitination" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NLE8 SUZ12 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 316 (116.3 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 60/103 (58%), Positives = 79/103 (76%)

Query:    11 SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
             + +LV  P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ D
Sbjct:   526 THILVCRPKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVD 582

Query:    71 SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
             S+D+KDP+WL+ KT   I+EF+DVNEGEKE+MKLWNLHVMK+G
Sbjct:   583 SEDEKDPEWLREKTITQIEEFSDVNEGEKEVMKLWNLHVMKHG 625

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0016574 "histone ubiquitination" evidence=IEA

GO:0035064 "methylated histone residue binding" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

UNIPROTKB|Q15022 SUZ12 "Polycomb protein SUZ12" [Homo sapiens (taxid:9606)]

 Score = 316 (116.3 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 60/103 (58%), Positives = 79/103 (76%)

Query:    11 SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
             + +LV  P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ D
Sbjct:   526 THILVCRPKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVD 582

Query:    71 SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
             S+D+KDP+WL+ KT   I+EF+DVNEGEKE+MKLWNLHVMK+G
Sbjct:   583 SEDEKDPEWLREKTITQIEEFSDVNEGEKEVMKLWNLHVMKHG 625

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0016574 "histone ubiquitination" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IMP

GO:0035064 "methylated histone residue binding" evidence=IDA

GO:0035098 "ESC/E(Z) complex" evidence=IMP;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042054 "histone methyltransferase activity" evidence=IMP

MGI|MGI:1261758 Suz12 "suppressor of zeste 12 homolog (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 316 (116.3 bits), Expect = 2.3e-27, P = 2.3e-27
 Identities = 60/103 (58%), Positives = 79/103 (76%)

Query:    11 SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
             + +LV  P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ D
Sbjct:   528 THILVCRPKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVD 584

Query:    71 SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
             S+D+KDP+WL+ KT   I+EF+DVNEGEKE+MKLWNLHVMK+G
Sbjct:   585 SEDEKDPEWLREKTITQIEEFSDVNEGEKEVMKLWNLHVMKHG 627

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0001739 "sex chromatin" evidence=IDA

GO:0003682 "chromatin binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005694 "chromosome" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0016568 "chromatin modification" evidence=IEA

GO:0016571 "histone methylation" evidence=IMP

GO:0016574 "histone ubiquitination" evidence=IMP

GO:0035064 "methylated histone residue binding" evidence=ISO

GO:0035098 "ESC/E(Z) complex" evidence=ISO;IDA

GO:0042054 "histone methyltransferase activity" evidence=ISO

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045596 "negative regulation of cell differentiation" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-030131-3255 suz12b "suppressor of zeste 12 homolog (Drosophila) b" [Danio rerio (taxid:7955)]

 Score = 315 (115.9 bits), Expect = 2.4e-27, P = 2.4e-27
 Identities = 59/103 (57%), Positives = 79/103 (76%)

Query:    11 SELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQD 70
             + +LV  P+R  K S+SEFL   ++D + +  R  VSGHNRLY H+ +C+P+ P+EM+ D
Sbjct:   486 THILVCRPKR-TKPSLSEFLE--SEDGEPEQQRTYVSGHNRLYFHSDSCMPLRPQEMEVD 542

Query:    71 SDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
             S+D++DP+WLQ KT   I+EFTDVNEGEKE+MKLWNLHVMK G
Sbjct:   543 SEDERDPEWLQEKTTTQIEEFTDVNEGEKEVMKLWNLHVMKNG 585

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

UNIPROTKB|E1B9T7 SUZ12 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 309 (113.8 bits), Expect = 1.3e-26, P = 1.3e-26
 Identities = 58/96 (60%), Positives = 75/96 (78%)

Query:    18 PRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDP 77
             P+R  K SMSEFL   ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+D+KDP
Sbjct:   534 PKR-TKASMSEFLE--SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDP 590

Query:    78 KWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYG 113
             +WL+ KT   I+EF+DVNEGEKE+MKLWNLHVMK+G
Sbjct:   591 EWLREKTITQIEEFSDVNEGEKEVMKLWNLHVMKHG 626

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=IEA

GO:0035064 "methylated histone residue binding" evidence=IEA

GO:0016574 "histone ubiquitination" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9NJG9	SUZ12_DROME	No assigned EC number	0.5922	0.8849	0.1111	yes	N/A
B0R1D5	SZ12B_DANRE	No assigned EC number	0.5841	0.8672	0.1436	yes	N/A
Q80U70	SUZ12_MOUSE	No assigned EC number	0.5940	0.8672	0.1322	yes	N/A
Q15022	SUZ12_HUMAN	No assigned EC number	0.5940	0.8672	0.1326	yes	N/A
Q0VA03	SUZ12_XENTR	No assigned EC number	0.5940	0.8672	0.14	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	113
pfam09733	141	pfam09733, VEFS-Box, VEFS-Box of polycomb protein	1e-30

>gnl|CDD|204299 pfam09733, VEFS-Box, VEFS-Box of polycomb protein

 Score =  105 bits (265), Expect = 1e-30
 Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 2/81 (2%)

Query: 35  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEM--DQDSDDQKDPKWLQTKTKMMIDEFT 92
             A+    R  +  H R + H+ TC P+ P+E+  D+DS+D+ D  WL  +T+ M+DEF 
Sbjct: 4   LSAERSDQRSYILLHKRQFFHSHTCQPMHPEEVMSDRDSEDEVDDDWLDLETRQMLDEFV 63

Query: 93  DVNEGEKELMKLWNLHVMKYG 113
           DVNEGEK +MKLWN  V K  
Sbjct: 64  DVNEGEKRIMKLWNSFVRKQR 84

The VEFS-Box (VRN2-EMF2-FIS2-Su(z)12) box is the C-terminal region of these proteins, characterized by an acidic cluster and a tryptophan/methionine-rich sequence, the acidic-W/M domain. Some of these sequences are associated with a zinc-finger domain about 100 residues towards the N-terminus. This protein is one of the polycomb cluster of proteins which control HOX gene transcription as it functions in heterochromatin-mediated repression. Length = 141

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	113
PF09733	140	VEFS-Box: VEFS-Box of polycomb protein; InterPro:	100.0
KOG2350|consensus	221		100.0

>PF09733 VEFS-Box: VEFS-Box of polycomb protein; InterPro: IPR019135 The VEFS-Box is found in the the C-terminal region of the VRN2, EMF2, FIS2, and Su(z)12 polycomb proteins

Probab=100.00  E-value=6.1e-39  Score=238.18  Aligned_cols=80  Identities=49%  Similarity=0.873  Sum_probs=77.4

Q ss_pred             ccCCCcCCCCCcccCCCcceeeccCccccCCCCC--CCCCCCCCCHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHhhh
Q psy6841          34 ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEM--DQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMK  111 (113)
Q Consensus        34 ~~~~~~~~~r~~~~~~~R~yfHs~T~~Pl~p~E~--D~DSEdE~D~~WL~~k~r~~LddF~DVn~~EKe~M~lWN~FV~k  111 (113)
                      .++++++++|+|++||||+||||+||+||+++|+  |+|||||+|++||+++++++|+||+|||++||+||++||+||+|
T Consensus         2 ~~~~~~~~~r~~~~~~~R~y~Hs~t~~p~~~~e~~sd~DSedE~D~~wl~~~~r~~l~dF~Dv~~~EKefM~lWN~fv~k   81 (140)
T PF09733_consen    2 KEPAERSDQRPYILLHNRQYFHSRTCQPMRPEEVLSDRDSEDEVDDEWLDQKHRRMLDDFSDVNEEEKEFMKLWNSFVMK   81 (140)
T ss_pred             CCchhhhcchhHhhccCcceeccccceeccHHHhcCCCCCCCcCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHH
Confidence            4678889999999999999999999999999999  99999999999999999999999999999999999999999999


Q ss_pred             cC
Q psy6841         112 YG  113 (113)
Q Consensus       112 q~  113 (113)
                      |+
T Consensus        82 ~r   83 (140)
T PF09733_consen   82 QR   83 (140)
T ss_pred             cc
Confidence            86

This domain is characterised by an acidic cluster and a tryptophan/methionine-rich sequence, the acidic-W/M domain []. In some proteins the VEFS-Box is associated with a zinc-finger domain located roughly 100 residues towards the N terminus. These proteins are part of the polycomb cluster of proteins which control HOX gene transcription as it functions in heterochromatin-mediated repression [].

>KOG2350|consensus

Probab=100.00  E-value=1.2e-37  Score=245.86  Aligned_cols=99  Identities=37%  Similarity=0.651  Sum_probs=90.3

Q ss_pred             CCCccceEeccCCCCCCChHHHHhhcccCCCcCCCCCcccCCCcceeeccCccccCCCCCCCCCCCCCC-HHHHHHHHHH
Q psy6841           8 SDGSELLVYYPRRHRKHSMSEFLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKD-PKWLQTKTKM   86 (113)
Q Consensus         8 ~~~t~~lv~rp~r~~~~slsefle~~~~~~~~~~~r~~~~~~~R~yfHs~T~~Pl~p~E~D~DSEdE~D-~~WL~~k~r~   86 (113)
                      .|+|+|++|+|+|.+ .++++|+|  .+|++..++    .|||||||||+|||||+++|+.+|+|+|.| ++||+.++++
T Consensus        61 ~p~t~i~~~~p~~~a-tt~k~~ae--rsd~~v~~l----~lhkRqffHS~t~qPl~leqvmsdrdsE~d~dd~a~~e~~~  133 (221)
T KOG2350|consen   61 TPITHILVCRPKRTA-TTMKEFAE--RSDGEVEQL----RLHKRQFFHSDTCQPLRLEQVMSDRDSEKDEDDWARLETST  133 (221)
T ss_pred             CcchhhhccchHhhh-hccccccc--ccccceeee----ccccceeeeccccCCCCHHHHhccccccccchhhhhhHHHH
Confidence            489999999999999 99999999  999987644    499999999999999999999555555555 8999999999


Q ss_pred             HhhccCCCChhhHHHHHHHHHHhhhcC
Q psy6841          87 MIDEFTDVNEGEKELMKLWNLHVMKYG  113 (113)
Q Consensus        87 ~LddF~DVn~~EKe~M~lWN~FV~kq~  113 (113)
                      ||++|+|||++||+||+|||+||+||+
T Consensus       134 mLe~fvdvne~ekr~mkLWNsfVrkqr  160 (221)
T KOG2350|consen  134 MLEEFVDVNEGEKRVMKLWNSFVRKQR  160 (221)
T ss_pred             HHHHhccccHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999996

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00