Psyllid ID: psy6862

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-----
MFRQLFHFRYHSVHFKPPVINVEDLLQQLLDGGGCGELTTPIILTMPEDLADLPCSPVPTPPTEEQLEDLVEPLDLPEHDTSTSRDNDDEDDVSSTVSNLSDISGFSDISGLDWKSGNFSGSLLWIRKQMANGINPRDVLSHILGADARIPDHIDDQTAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQVAGIENVIECHDWVGVCRRPLNQL
cccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHcccccccccccHHHHHHHHHHHHcccHHHHHccccccHHHHHHHHHHcccEEEEEccccccccccccccccccccccccccccccccccHHEEHHHHHHccHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccccHHHHHHccccEEEEcccccccccccccc
cccEEEEEEEcEEcccccEEEHHHHHHHHHcccccccccccEEEccccHHcccccccccccccHHHccccccccccccccccccccccccccccccHccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHccccccccccccHHHHHHHHHHHHHcccHHHHccccccHHHHHHHHHHcccEEEEEcHHHHHHHccccccccccccccHHHcccccccHHHHHEHHHHHHccHHHHHHHHHHccccccccHHHHHHHHHHHcccEEEEEEcccccHHHHccccEEEEEccccEEEEcccccc
mfrqlfhfryhsvhfkppviNVEDLLQQLldgggcgelttpiiltmpedladlpcspvptppteeqledlvepldlpehdtstsrdnddeddvsstvsnlsdisgfsdisgldwksgnfsgSLLWIRKQManginprdVLSHIlgadaripdhiddQTAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGagvsvscgipdfrsrdgiysrlavdfpnlpdpqamfdinyfkqdprpffkfareiypgqfkpspcHRFIKMLERHGKLLRNYSQNIDTLEQVAGIENVIECHdwvgvcrrplnql
MFRQLFHFRYHSVHFKPPVINVEDLLQQLLDGGGCGELTTPIILTMPEDLADLPCSPVPTPPTEEQLEDLVEPLDLPEHDtstsrdnddeddvsstvsnlsdisgfsdisgldwKSGNFSGSLLWIRKQMANGINPRDVLSHILGADARIPDHIDDQTAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPgqfkpspcHRFIKMLERHGKLLRNYSQNIDTLEQVAGIENVIECHDWVGVCRRPLNQL
MFRQLFHFRYHSVHFKPPVINVedllqqlldgggcgelTTPIILTMPEDLADLPCSPVPTPPTeeqledlvepldlpeHDTSTSRDNDDEDDVSSTVSNLSDISGFSDISGLDWKSGNFSGSLLWIRKQMANGINPRDVLSHILGADARIPDHIDDQTAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQVAGIENVIECHDWVGVCRRPLNQL
***QLFHFRYHSVHFKPPVINVEDLLQQLLDGGGCGELTTPIILTMPEDLA*****************************************************GFSDISGLDWKSGNFSGSLLWIRKQMANGINPRDVLSHILGADARIPDHIDDQTAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQVAGIENVIECHDWVGVCRR*****
*FRQLFHFRYHSVHFKPPVINVEDLLQ*************************************************************************************************WIRKQMANGINPRDVLSHILGADA******DDQTAWR*******************TFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQVAGIENVIECHDWVGVCRRPLN**
MFRQLFHFRYHSVHFKPPVINVEDLLQQLLDGGGCGELTTPIILTMPEDLADLPCSPVPTPPTEEQLEDLVEPLDLPE*******************SNLSDISGFSDISGLDWKSGNFSGSLLWIRKQMANGINPRDVLSHILGADARIPDHIDDQTAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQVAGIENVIECHDWVGVCRRPLNQL
*FRQLFHFRYHSVHFKPPVINVEDLLQQLLDGGGCGELTTPIILTMPEDLA*****************************************************************GNFSGSLLWIRKQMANGINPRDVLSHILGADARIPDHIDDQTAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQVAGIENVIECHDWVGVCRRPLNQL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MFRQLFHFRYHSVHFKPPVINVEDLLQQLLDGGGCGELTTPIILTMPEDLADLPCSPVPTPPTEEQLEDLVEPLDLPEHDTSTSRDNDDEDDVSSTVSNLSDISGFSDISGLDWKSGNFSGSLLWIRKQMANGINPRDVLSHILGADARIPDHIDDQTAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMxxxxxxxxxxxxxxxxxxxxxAGIENVIECHDWVGVCRRPLNQL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query315 2.2.26 [Sep-21-2011]
Q9VK34 823 NAD-dependent histone dea yes N/A 0.580 0.222 0.628 2e-66
Q96EB6 747 NAD-dependent protein dea yes N/A 0.619 0.261 0.586 3e-66
Q923E4 737 NAD-dependent protein dea yes N/A 0.619 0.264 0.581 7e-66
Q60L58 602 NAD-dependent protein dea N/A N/A 0.514 0.269 0.543 2e-48
Q21921 607 NAD-dependent protein dea yes N/A 0.431 0.224 0.632 5e-48
Q54GV7 542 NAD-dependent deacetylase yes N/A 0.444 0.258 0.520 6e-39
Q8VDQ8 389 NAD-dependent protein dea no N/A 0.409 0.331 0.5 2e-31
C8V3W5 489 NAD-dependent protein dea no N/A 0.441 0.284 0.486 3e-31
Q5RJQ4 350 NAD-dependent protein dea no N/A 0.409 0.368 0.492 7e-31
Q8IXJ6 389 NAD-dependent protein dea no N/A 0.409 0.331 0.477 5e-30
>sp|Q9VK34|SIR2_DROME NAD-dependent histone deacetylase Sir2 OS=Drosophila melanogaster GN=Sir2 PE=1 SV=1 Back     alignment and function desciption
 Score =  252 bits (644), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 120/191 (62%), Positives = 147/191 (76%), Gaps = 8/191 (4%)

Query: 113 DWKSGNFSGSLLWIRKQMANGINPRDVLSHILGADAR-IPDHIDDQTAWRLVLNMICEPR 171
           DWK       L W++++   G  PR V++ I+   A  +    DD   W  + +++ EP+
Sbjct: 148 DWK-------LRWLQREFYTGRVPRQVIASIMPHFATGLAGDTDDSVLWDYLAHLLNEPK 200

Query: 172 RRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPD 231
           RR +L  + TF+DVI L+K   KIIVLTGAGVSVSCGIPDFRS +GIY+RLA DFP+LPD
Sbjct: 201 RRNKLASVNTFDDVISLVKKSQKIIVLTGAGVSVSCGIPDFRSTNGIYARLAHDFPDLPD 260

Query: 232 PQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQ 291
           PQAMFDINYFK+DPRPF+KFAREIYPG+F+PSPCHRFIKMLE  GKLLRNY+QNIDTLE+
Sbjct: 261 PQAMFDINYFKRDPRPFYKFAREIYPGEFQPSPCHRFIKMLETKGKLLRNYTQNIDTLER 320

Query: 292 VAGIENVIECH 302
           VAGI+ VIECH
Sbjct: 321 VAGIQRVIECH 331
NAD-dependent histone deacetylase involved in heterochromatic silencing. Mildly suppresses the heterochromatin-mediated silencing phenomenon known as position-effect variegation (PEV). Required for epigenetic silencing of the polycomb group proteins. Has histone H4 deacetylase activity in vitro. Required maternally for establishing proper segmentation of the embryo. Involved in sex determination. May be involved in the regulation of life span.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q96EB6|SIR1_HUMAN NAD-dependent protein deacetylase sirtuin-1 OS=Homo sapiens GN=SIRT1 PE=1 SV=2 Back     alignment and function description
>sp|Q923E4|SIR1_MOUSE NAD-dependent protein deacetylase sirtuin-1 OS=Mus musculus GN=Sirt1 PE=1 SV=2 Back     alignment and function description
>sp|Q60L58|SIR2_CAEBR NAD-dependent protein deacetylase sir-2.1 OS=Caenorhabditis briggsae GN=sir-2.1 PE=3 SV=1 Back     alignment and function description
>sp|Q21921|SIR2_CAEEL NAD-dependent protein deacetylase sir-2.1 OS=Caenorhabditis elegans GN=sir-2.1 PE=1 SV=1 Back     alignment and function description
>sp|Q54GV7|SIR2D_DICDI NAD-dependent deacetylase sir2D OS=Dictyostelium discoideum GN=sir2D PE=2 SV=1 Back     alignment and function description
>sp|Q8VDQ8|SIR2_MOUSE NAD-dependent protein deacetylase sirtuin-2 OS=Mus musculus GN=Sirt2 PE=1 SV=2 Back     alignment and function description
>sp|C8V3W5|HST1_EMENI NAD-dependent protein deacetylase hst1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN10449 PE=3 SV=1 Back     alignment and function description
>sp|Q5RJQ4|SIR2_RAT NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus GN=Sirt2 PE=1 SV=1 Back     alignment and function description
>sp|Q8IXJ6|SIR2_HUMAN NAD-dependent protein deacetylase sirtuin-2 OS=Homo sapiens GN=SIRT2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query315
332022373 854 NAD-dependent deacetylase sirtuin-1 [Acr 0.679 0.250 0.702 3e-86
328790113 892 PREDICTED: hypothetical protein LOC41191 0.682 0.241 0.693 6e-86
380011705 849 PREDICTED: uncharacterized protein LOC10 0.682 0.253 0.693 6e-86
307095206305 NAD-dependent deacetylase sirtuin1-like 0.666 0.688 0.690 1e-85
307186885 775 NAD-dependent deacetylase sirtuin-1 [Cam 0.682 0.277 0.693 2e-85
383850442 892 PREDICTED: uncharacterized protein LOC10 0.749 0.264 0.648 3e-85
350419529 898 PREDICTED: NAD-dependent deacetylase sir 0.682 0.239 0.688 5e-85
340712899 898 PREDICTED: NAD-dependent deacetylase sir 0.682 0.239 0.688 7e-85
270003357 722 hypothetical protein TcasGA2_TC002584 [T 0.752 0.328 0.596 3e-82
189235743 695 PREDICTED: similar to NAD-dependent deac 0.752 0.341 0.596 4e-82
>gi|332022373|gb|EGI62685.1| NAD-dependent deacetylase sirtuin-1 [Acromyrmex echinatior] Back     alignment and taxonomy information
 Score =  324 bits (831), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 151/215 (70%), Positives = 181/215 (84%), Gaps = 1/215 (0%)

Query: 88  DDEDDVSSTVSNLSDISGFSDISGLDWKSGNFSGSLLWIRKQMANGINPRDVLSHILGAD 147
           D++D+VSSTVSNLSD+SG SD+SG    +  +  +  WI+KQM  G NPRD+L H L   
Sbjct: 124 DEKDEVSSTVSNLSDLSGLSDLSGEAEVNHQWRNASSWIQKQMLTGANPRDLL-HNLMDS 182

Query: 148 ARIPDHIDDQTAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSC 207
            ++P+ +DD T W++++NM+ EP RRQ+L+HI T +DV+ L+++  KIIVLTGAGVSVSC
Sbjct: 183 IQVPEQVDDLTLWKIIINMMSEPPRRQKLKHINTLSDVVRLIRSSKKIIVLTGAGVSVSC 242

Query: 208 GIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHR 267
           GIPDFRSRDGIYSRLA DFP+LPDPQAMFDI+YF QDPRPF+KFAREIYPGQFKPSPCHR
Sbjct: 243 GIPDFRSRDGIYSRLAQDFPDLPDPQAMFDIDYFSQDPRPFYKFAREIYPGQFKPSPCHR 302

Query: 268 FIKMLERHGKLLRNYSQNIDTLEQVAGIENVIECH 302
           FIKMLE+  KLLRNYSQNIDTLEQVAGIENVIECH
Sbjct: 303 FIKMLEKQKKLLRNYSQNIDTLEQVAGIENVIECH 337

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328790113|ref|XP_395386.3| PREDICTED: hypothetical protein LOC411917 isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|380011705|ref|XP_003689938.1| PREDICTED: uncharacterized protein LOC100863714 [Apis florea] Back     alignment and taxonomy information
>gi|307095206|gb|ADN29909.1| NAD-dependent deacetylase sirtuin1-like protein [Triatoma matogrossensis] Back     alignment and taxonomy information
>gi|307186885|gb|EFN72286.1| NAD-dependent deacetylase sirtuin-1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|383850442|ref|XP_003700804.1| PREDICTED: uncharacterized protein LOC100881811 [Megachile rotundata] Back     alignment and taxonomy information
>gi|350419529|ref|XP_003492215.1| PREDICTED: NAD-dependent deacetylase sirtuin-1-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|340712899|ref|XP_003394990.1| PREDICTED: NAD-dependent deacetylase sirtuin-1-like isoform 1 [Bombus terrestris] Back     alignment and taxonomy information
>gi|270003357|gb|EEZ99804.1| hypothetical protein TcasGA2_TC002584 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|189235743|ref|XP_967068.2| PREDICTED: similar to NAD-dependent deacetylase sirtuin-1 (SIR2alpha) (mSIR2a) (Sir2) (SIR2-like protein 1) [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query315
ZFIN|ZDB-GENE-070801-2 710 sirt1 "sirtuin (silent mating 0.615 0.273 0.607 2e-63
FB|FBgn0024291 823 Sir2 "Sir2" [Drosophila melano 0.663 0.253 0.581 2.6e-63
UNIPROTKB|E2RE73 745 SIRT1 "Uncharacterized protein 0.688 0.291 0.554 1.1e-62
UNIPROTKB|F1N886 601 SIRT1 "Uncharacterized protein 0.619 0.324 0.576 1.8e-62
UNIPROTKB|Q96EB6 747 SIRT1 "NAD-dependent protein d 0.619 0.261 0.586 2.3e-62
UNIPROTKB|F1SUJ0 639 SIRT1 "Uncharacterized protein 0.619 0.305 0.586 2.3e-62
UNIPROTKB|F1LTP2 628 F1LTP2 "Uncharacterized protei 0.619 0.310 0.586 2.3e-62
UNIPROTKB|F1MQB8 734 SIRT1 "Uncharacterized protein 0.619 0.265 0.581 3e-62
MGI|MGI:2135607 737 Sirt1 "sirtuin 1 (silent matin 0.619 0.264 0.581 3.8e-62
RGD|1308542 589 Sirt1 "sirtuin 1" [Rattus norv 0.580 0.310 0.603 1.6e-61
ZFIN|ZDB-GENE-070801-2 sirt1 "sirtuin (silent mating type information regulation 2 homolog) 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 119/196 (60%), Positives = 153/196 (78%)

Query:   107 SDISGLDWKSGNFSGSLLWIRKQMANGINPRDVLSHILGADARIPDHIDDQTAWRLVLNM 166
             S  S  DW      GS  +I++ +  G +PR +L  +L  +  +P  +DD T W++++N 
Sbjct:   106 SRASSSDWTPQPQIGSYRFIQQHIMRGTDPRAILKDLL-PETVLPPDLDDMTLWQIIIN- 163

Query:   167 ICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDF 226
             I EP +R++ + I T  DV+ LL    KI+VLTGAGVSVSCGIPDFRSRDGIY+RLAVDF
Sbjct:   164 ISEPPKRKKRKDINTLEDVVRLLNERKKILVLTGAGVSVSCGIPDFRSRDGIYARLAVDF 223

Query:   227 PNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNI 286
             P+LPDPQAMFDI+YF++DPRPFFKFA+EIYPGQF+PSPCHRFI ML++ G+LLRNY+QNI
Sbjct:   224 PDLPDPQAMFDIDYFRRDPRPFFKFAKEIYPGQFQPSPCHRFISMLDKKGRLLRNYTQNI 283

Query:   287 DTLEQVAGIENVIECH 302
             DTLEQVAGI+ +I+CH
Sbjct:   284 DTLEQVAGIQKIIQCH 299
GO:0070403 "NAD+ binding" evidence=IEA
GO:0002042 "cell migration involved in sprouting angiogenesis" evidence=IMP
GO:0001944 "vasculature development" evidence=IMP
FB|FBgn0024291 Sir2 "Sir2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E2RE73 SIRT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1N886 SIRT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q96EB6 SIRT1 "NAD-dependent protein deacetylase sirtuin-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SUJ0 SIRT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1LTP2 F1LTP2 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1MQB8 SIRT1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2135607 Sirt1 "sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1308542 Sirt1 "sirtuin 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q21921SIR2_CAEEL3, ., 5, ., 1, ., -0.63230.43170.2240yesN/A
Q923E4SIR1_MOUSE3, ., 5, ., 1, ., -0.58160.61900.2645yesN/A
Q54GV7SIR2D_DICDI3, ., 5, ., 1, ., -0.52080.44440.2583yesN/A
Q9VK34SIR2_DROME3, ., 5, ., 1, ., -0.62820.58090.2223yesN/A
Q96EB6SIR1_HUMAN3, ., 5, ., 1, ., -0.58670.61900.2610yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.10.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query315
cd01408 235 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) w 6e-65
pfam02146177 pfam02146, SIR2, Sir2 family 4e-51
cd01407 218 cd01407, SIR2-fam, SIR2 family of proteins include 2e-46
COG0846 250 COG0846, SIR2, NAD-dependent protein deacetylases, 3e-40
cd00296 222 cd00296, SIR2, SIR2 superfamily of proteins includ 9e-38
cd01413 222 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryo 3e-31
PRK14138 244 PRK14138, PRK14138, NAD-dependent deacetylase; Pro 1e-27
PRK00481 242 PRK00481, PRK00481, NAD-dependent deacetylase; Pro 2e-27
PTZ00410 349 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisiona 9e-26
cd01411225 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic 2e-22
cd01412 224 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryoti 4e-15
cd01410 206 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic 5e-15
cd01409 260 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic 1e-14
PTZ00409 271 PTZ00409, PTZ00409, Sir2 (Silent Information Regul 2e-12
PRK05333 285 PRK05333, PRK05333, NAD-dependent deacetylase; Pro 6e-11
PTZ00408 242 PTZ00408, PTZ00408, NAD-dependent deacetylase; Pro 3e-09
>gnl|CDD|238699 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information 
 Score =  204 bits (520), Expect = 6e-65
 Identities = 70/112 (62%), Positives = 88/112 (78%), Gaps = 5/112 (4%)

Query: 194 KIIVLTGAGVSVSCGIPDFRSRD-GIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFA 252
           KI+VL GAG+S S GIPDFRS   G+Y+ LA    NLP P+AMFDI+YF+++PRPF+  A
Sbjct: 2   KIVVLVGAGISTSAGIPDFRSPGTGLYANLARY--NLPYPEAMFDISYFRKNPRPFYALA 59

Query: 253 REIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQVAGIEN--VIECH 302
           +E+YPGQFKPS  H FIK+LE  G LLRNY+QNIDTLE+VAG+ +  +IE H
Sbjct: 60  KELYPGQFKPSVAHYFIKLLEDKGLLLRNYTQNIDTLERVAGVPDDRIIEAH 111

Sir2 proteins have been shown to regulate gene silencing, DNA repair, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The nuclear SIRT1 has been shown to target the p53 tumor suppressor protein for deacetylation to suppress DNA damage, and the cytoplasmic SIRT2 homolog has been shown to target alpha-tubulin for deacetylation for the maintenance of cell integrity. Length = 235
>gnl|CDD|216902 pfam02146, SIR2, Sir2 family Back     alignment and domain information
>gnl|CDD|238698 cd01407, SIR2-fam, SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>gnl|CDD|223915 COG0846, SIR2, NAD-dependent protein deacetylases, SIR2 family [Transcription] Back     alignment and domain information
>gnl|CDD|238184 cd00296, SIR2, SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>gnl|CDD|238704 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|172627 PRK14138, PRK14138, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|234777 PRK00481, PRK00481, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|185600 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisional Back     alignment and domain information
>gnl|CDD|238702 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|238703 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>gnl|CDD|238701 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|238700 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|173599 PTZ00409, PTZ00409, Sir2 (Silent Information Regulator) protein; Provisional Back     alignment and domain information
>gnl|CDD|235415 PRK05333, PRK05333, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|240405 PTZ00408, PTZ00408, NAD-dependent deacetylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 315
KOG2684|consensus 412 100.0
COG0846 250 SIR2 NAD-dependent protein deacetylases, SIR2 fami 100.0
PTZ00409 271 Sir2 (Silent Information Regulator) protein; Provi 100.0
PTZ00410 349 NAD-dependent SIR2; Provisional 100.0
PRK00481 242 NAD-dependent deacetylase; Provisional 100.0
cd01411225 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homo 100.0
cd01408 235 SIRT1 SIRT1: Eukaryotic group (class1) which inclu 100.0
PRK14138 244 NAD-dependent deacetylase; Provisional 100.0
cd01413222 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group 100.0
cd01409 260 SIRT4 SIRT4: Eukaryotic and prokaryotic group (cla 100.0
cd01407218 SIR2-fam SIR2 family of proteins includes silent i 100.0
PRK05333 285 NAD-dependent deacetylase; Provisional 100.0
cd01412 224 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaea 100.0
PTZ00408 242 NAD-dependent deacetylase; Provisional 100.0
KOG2682|consensus 314 99.97
cd01410 206 SIRT7 SIRT7: Eukaryotic and prokaryotic group (cla 99.97
PF02146178 SIR2: Sir2 family; InterPro: IPR003000 These seque 99.97
cd00296222 SIR2 SIR2 superfamily of proteins includes silent 99.97
KOG2683|consensus 305 99.94
KOG1905|consensus 353 99.91
cd01406242 SIR2-like Sir2-like: Prokaryotic group of uncharac 99.18
PF04574153 DUF592: Protein of unknown function (DUF592); Inte 97.63
>KOG2684|consensus Back     alignment and domain information 
Probab=100.00  E-value=6e-42  Score=334.67  Aligned_cols=186  Identities=44%  Similarity=0.761  Sum_probs=166.8

Q ss_pred             HHHHHHHhhCCCCHHHHHHHhhcCCCCCCCCCC--hHHHHHHHHHhhcCccccccccccccHHHHHHHHHhCCcEEEEcC
Q psy6862         123 LLWIRKQMANGINPRDVLSHILGADARIPDHID--DQTAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTG  200 (315)
Q Consensus       123 ~~~~~~~~~~g~~~~~il~~~~~~~~~~p~~~~--~~~~~~~l~~~~~~~~~r~kl~~~~tLe~l~elI~~Ak~IVVlTG  200 (315)
                      ..|.++....|..++.+++.+.+.- .-+.+.+  ...+|.+...++++.++|.++...++++++..++++|++|||+||
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~s~~~~~~~~~~~~l~~~l~~~~~~r~~~~~~~t~~~~~~~l~kaKrIvVlTG   96 (412)
T KOG2684|consen   18 LRVNQREFPCGLQSRHILKELVPLI-PPSREYSQEVNLLKDLQSTLLSECLKRARLSNFNTLADFVKLLKKAKRIVVLTG   96 (412)
T ss_pred             HHHhhcccccCcchHHHHHhcCccc-CCchhhchhhcccccHHHHHhhhhhhhccCCccccHHHHHHHHHhcCeEEEEeC
Confidence            6777888889999999999976532 1222222  234788888889999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCcCCCchhhhccccCCCCCCChhhhcchHhhhcCChHHHHHHHHHcCCCCCCChHHHHHHHHHHcCCcce
Q psy6862         201 AGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLR  280 (315)
Q Consensus       201 AGISaaSGIPDFRs~~Gly~~l~~~f~~l~dP~emfd~~~F~~dP~~Fw~f~r~i~~~~~~Pn~~H~aLa~Le~~Gkl~~  280 (315)
                      ||||+++|||||||.+|+|+++++  +++++|++|||+.+|+++|..||.|++++++....|++.|.+|++|+++||++|
T Consensus        97 AGVSvs~GIPDFRSs~G~ys~l~~--~~l~sp~~mFd~~~fr~d~~~F~~~a~~l~~~~~~ps~~H~Fi~~L~~~gkLlR  174 (412)
T KOG2684|consen   97 AGVSVSAGIPDFRSSEGIYSKLKA--PDLPSPQAMFDISYFRDDPSIFYRFARELKPPSNNPSAFHEFIKLLEKKGKLLR  174 (412)
T ss_pred             CceeeecCCCCccccccHHHHhhc--ccCCCHHHhccchhhhcccHHHHHHHHHhcCCccCCchHHHHHHHHHhcCceeE
Confidence            999999999999999999999987  689999999999999999999999999999888889999999999999999999


Q ss_pred             eeecCccchHhhhCCCC--eeEcCccccccCcC
Q psy6862         281 NYSQNIDTLEQVAGIEN--VIECHDWVGVCRRP  311 (315)
Q Consensus       281 VITQNIDgLhqkAG~~k--VIElHGSl~qC~~P  311 (315)
                      +|||||||||++||++.  +++|||||++++|-
T Consensus       175 ~YTQNID~LE~~aGl~~~~lVq~HGSf~t~sCt  207 (412)
T KOG2684|consen  175 NYTQNIDGLERKAGLSTNKLVQCHGSFKTASCT  207 (412)
T ss_pred             EeecccchhhhccCCCcCceEEeccccceeeec
Confidence            99999999999999965  99999999965543

>COG0846 SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] Back     alignment and domain information
>PTZ00409 Sir2 (Silent Information Regulator) protein; Provisional Back     alignment and domain information
>PTZ00410 NAD-dependent SIR2; Provisional Back     alignment and domain information
>PRK00481 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01411 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PRK14138 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01413 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd01409 SIRT4 SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd01407 SIR2-fam SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>PRK05333 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01412 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>PTZ00408 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>KOG2682|consensus Back     alignment and domain information
>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PF02146 SIR2: Sir2 family; InterPro: IPR003000 These sequences represent the Sirtuin (Sir2-related) family of NAD+-dependent deacetylases Back     alignment and domain information
>cd00296 SIR2 SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>KOG2683|consensus Back     alignment and domain information
>KOG1905|consensus Back     alignment and domain information
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PF04574 DUF592: Protein of unknown function (DUF592); InterPro: IPR007654 This N-terminal region is found in SIR2 proteins (IPR003000 from INTERPRO) and its homologues Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query315
4i5i_A 287 Crystal Structure Of The Sirt1 Catalytic Domain Bou 4e-55
1j8f_A 323 Human Sirt2 Histone Deacetylase Length = 323 3e-31
1j8f_C 323 Human Sirt2 Histone Deacetylase Length = 323 4e-31
4iao_A 492 Crystal Structure Of Sir2 C543s Mutant In Complex W 6e-29
2hjh_A 354 Crystal Structure Of The Sir2 Deacetylase Length = 7e-28
3glr_A 285 Crystal Structure Of Human Sirt3 With Acetyl-Lysine 8e-27
4hd8_A 284 Crystal Structure Of Human Sirt3 In Complex With Fl 9e-27
4fvt_A 274 Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad L 1e-26
1q14_A 361 Structure And Autoregulation Of The Yeast Hst2 Homo 3e-26
1q17_A 300 Structure Of The Yeast Hst2 Protein Deacetylase In 5e-26
2od7_A 308 Crystal Structure Of Yhst2 Bound To The Intermediat 5e-26
1szc_A 297 Structural Basis For Nicotinamide Cleavage And Adp- 6e-26
1q1a_A 289 Structure Of The Yeast Hst2 Protein Deacetylase In 7e-26
2od2_A 308 Crystal Structure Of Yhst2 I117f Mutant Bound To Ca 2e-25
1yc5_A 246 Sir2-P53 Peptide-Nicotinamide Length = 246 1e-16
2h4h_A 246 Sir2 H116y Mutant-P53 Peptide-Nad Length = 246 5e-16
2h59_A 246 Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp 1e-15
1ma3_A 253 Structure Of A Sir2 Enzyme Bound To An Acetylated P 1e-15
1m2n_A 249 Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acety 2e-12
1m2k_A 249 Sir2 Homologue F159a Mutant-Adp Ribose Complex Leng 2e-12
1m2g_A 249 Sir2 Homologue-Adp Ribose Complex Length = 249 3e-12
1ici_A 256 Crystal Structure Of A Sir2 Homolog-Nad Complex Len 3e-12
1m2h_A 249 Sir2 Homologue S24a Mutant-adp Ribose Complex Lengt 5e-12
1m2j_A 249 Sir2 Homologue H80n Mutant-Adp Ribose Complex Lengt 2e-11
2nyr_A 271 Crystal Structure Of Human Sirtuin Homolog 5 In Com 4e-08
3rig_A 273 Sirt5 Is An Nad-Dependent Protein Lysine Demalonyla 4e-08
4g1c_A 267 Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length 4e-08
4hda_A 275 Crystal Structure Of Human Sirt5 In Complex With Fl 4e-08
2b4y_A 271 Crystal Structure Of Human Sirtuin Homolog 5 Length 5e-08
3u31_A 290 Plasmodium Falciparum Sir2a Preferentially Hydrolyz 5e-07
3jwp_A 265 Crystal Structure Of Plasmodium Falciparum Sir2a (P 5e-07
1s5p_A 235 Structure And Substrate Binding Properties Of Cobb, 1e-06
>pdb|4I5I|A Chain A, Crystal Structure Of The Sirt1 Catalytic Domain Bound To Nad And An Ex527 Analog Length = 287 Back     alignment and structure 
Iteration: 1

 Score =  211 bits (537), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 94/124 (75%), Positives = 111/124 (89%)
Query: 179 IGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDI 238
           + T  D + LL+ C KIIVLTGAGVSVSCGIPDFRSRDGIY+RLAVDFP+LPDPQAMFDI
Sbjct: 3   LNTIEDAVKLLQECKKIIVLTGAGVSVSCGIPDFRSRDGIYARLAVDFPDLPDPQAMFDI 62
Query: 239 NYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQVAGIENV 298
            YF++DPRPFFKFA+EIYPGQF+PS CH+FI + ++ GKLLRNY+QNIDTLEQVAGI+ +
Sbjct: 63  EYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAGIQRI 122
Query: 299 IECH 302
           I+CH
Sbjct: 123 IQCH 126
>pdb|1J8F|A Chain A, Human Sirt2 Histone Deacetylase Length = 323 Back     alignment and structure
>pdb|1J8F|C Chain C, Human Sirt2 Histone Deacetylase Length = 323 Back     alignment and structure
>pdb|4IAO|A Chain A, Crystal Structure Of Sir2 C543s Mutant In Complex With Sid Domain Of Sir4 Length = 492 Back     alignment and structure
>pdb|2HJH|A Chain A, Crystal Structure Of The Sir2 Deacetylase Length = 354 Back     alignment and structure
>pdb|3GLR|A Chain A, Crystal Structure Of Human Sirt3 With Acetyl-Lysine Acecs2 Peptide Length = 285 Back     alignment and structure
>pdb|4HD8|A Chain A, Crystal Structure Of Human Sirt3 In Complex With Fluor-de-lys Peptide And Piceatannol Length = 284 Back     alignment and structure
>pdb|4FVT|A Chain A, Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad Length = 274 Back     alignment and structure
>pdb|1Q14|A Chain A, Structure And Autoregulation Of The Yeast Hst2 Homolog Of Sir2 Length = 361 Back     alignment and structure
>pdb|1Q17|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 300 Back     alignment and structure
>pdb|2OD7|A Chain A, Crystal Structure Of Yhst2 Bound To The Intermediate Analogue Adp-Hpd, And And Aceylated H4 Peptide Length = 308 Back     alignment and structure
>pdb|1SZC|A Chain A, Structural Basis For Nicotinamide Cleavage And Adp-Ribose Transfer By Nad+-Dependent Sir2 HistonePROTEIN DEACETYLASES Length = 297 Back     alignment and structure
>pdb|1Q1A|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 289 Back     alignment and structure
>pdb|2OD2|A Chain A, Crystal Structure Of Yhst2 I117f Mutant Bound To Carba-Nad+ And An Acetylated H4 Peptide Length = 308 Back     alignment and structure
>pdb|1YC5|A Chain A, Sir2-P53 Peptide-Nicotinamide Length = 246 Back     alignment and structure
>pdb|2H4H|A Chain A, Sir2 H116y Mutant-P53 Peptide-Nad Length = 246 Back     alignment and structure
>pdb|2H59|A Chain A, Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp Ribose Length = 246 Back     alignment and structure
>pdb|1MA3|A Chain A, Structure Of A Sir2 Enzyme Bound To An Acetylated P53 Peptide Length = 253 Back     alignment and structure
>pdb|1M2N|A Chain A, Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acetyl Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2K|A Chain A, Sir2 Homologue F159a Mutant-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2G|A Chain A, Sir2 Homologue-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1ICI|A Chain A, Crystal Structure Of A Sir2 Homolog-Nad Complex Length = 256 Back     alignment and structure
>pdb|1M2H|A Chain A, Sir2 Homologue S24a Mutant-adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2J|A Chain A, Sir2 Homologue H80n Mutant-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|2NYR|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 In Complex With Suramin Length = 271 Back     alignment and structure
>pdb|3RIG|A Chain A, Sirt5 Is An Nad-Dependent Protein Lysine Demalonylase And Desuccinylase Length = 273 Back     alignment and structure
>pdb|4G1C|A Chain A, Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length = 267 Back     alignment and structure
>pdb|4HDA|A Chain A, Crystal Structure Of Human Sirt5 In Complex With Fluor-de-lys Peptide And Resveratrol Length = 275 Back     alignment and structure
>pdb|2B4Y|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 Length = 271 Back     alignment and structure
>pdb|3U31|A Chain A, Plasmodium Falciparum Sir2a Preferentially Hydrolyzes Medium And Long Chain Fatty Acyl Lysine Length = 290 Back     alignment and structure
>pdb|3JWP|A Chain A, Crystal Structure Of Plasmodium Falciparum Sir2a (Pf13_0152) In Complex With Amp Length = 265 Back     alignment and structure
>pdb|1S5P|A Chain A, Structure And Substrate Binding Properties Of Cobb, A Sir2 Homolog Protein Deacetylase From Eschericia Coli Length = 235 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query315
2hjh_A 354 NAD-dependent histone deacetylase SIR2; protein, s 1e-66
3glr_A 285 NAD-dependent deacetylase sirtuin-3, mitochondria; 4e-62
1q1a_A 289 HST2 protein; ternary complex, histone deacetylase 7e-62
1j8f_A 323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 2e-58
1q14_A 361 HST2 protein; histone deacetylase, hydrolase; 2.50 2e-55
1yc5_A 246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 7e-53
3u31_A 290 SIR2A, transcriptional regulatory protein SIR2 hom 2e-39
3k35_A 318 NAD-dependent deacetylase sirtuin-6; rossmann fold 9e-39
1ma3_A 253 SIR2-AF2, transcriptional regulatory protein, SIR2 1e-38
3pki_A 355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 3e-38
1m2k_A 249 Silent information regulator 2; protein-ligand com 7e-29
1s5p_A 235 NAD-dependent deacetylase; protein deacetylase, SI 1e-26
3riy_A 273 NAD-dependent deacetylase sirtuin-5; desuccinylase 1e-22
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Length = 354 Back     alignment and structure
 Score =  211 bits (539), Expect = 1e-66
 Identities = 67/144 (46%), Positives = 85/144 (59%), Gaps = 4/144 (2%)

Query: 161 RLVLNMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYS 220
            L   +      R RL +  T +  I  L T  KI+VLTGAGVS S GIPDFRS +G YS
Sbjct: 15  DLQRAINKVLCTRLRLSNFFTIDHFIQKLHTARKILVLTGAGVSTSLGIPDFRSSEGFYS 74

Query: 221 RLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLR 280
           ++      L DPQ +F+ N F  DP  F+  A  + P +   SP H FIKML+  GKLLR
Sbjct: 75  KI--KHLGLDDPQDVFNYNIFMHDPSVFYNIANMVLPPEKIYSPLHSFIKMLQMKGKLLR 132

Query: 281 NYSQNIDTLEQVAGI--ENVIECH 302
           NY+QNID LE  AGI  + +++CH
Sbjct: 133 NYTQNIDNLESYAGISTDKLVQCH 156
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A Length = 285 Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Length = 289 Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Length = 323 Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Length = 361 Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Length = 246 Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Length = 290 Back     alignment and structure
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Length = 318 Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Length = 253 Back     alignment and structure
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Length = 355 Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Length = 249 Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Length = 235 Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} PDB: 3rig_A* 2b4y_A* 2nyr_A* Length = 273 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query315
4iao_A 492 NAD-dependent histone deacetylase SIR2; protein co 100.0
2hjh_A 354 NAD-dependent histone deacetylase SIR2; protein, s 100.0
3glr_A 285 NAD-dependent deacetylase sirtuin-3, mitochondria; 100.0
1q1a_A 289 HST2 protein; ternary complex, histone deacetylase 100.0
1j8f_A 323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 100.0
1ma3_A 253 SIR2-AF2, transcriptional regulatory protein, SIR2 100.0
3u31_A 290 SIR2A, transcriptional regulatory protein SIR2 hom 100.0
1yc5_A 246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 100.0
3riy_A 273 NAD-dependent deacetylase sirtuin-5; desuccinylase 100.0
1m2k_A 249 Silent information regulator 2; protein-ligand com 100.0
1q14_A 361 HST2 protein; histone deacetylase, hydrolase; 2.50 100.0
1s5p_A 235 NAD-dependent deacetylase; protein deacetylase, SI 100.0
3k35_A 318 NAD-dependent deacetylase sirtuin-6; rossmann fold 99.97
3pki_A 355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 99.97
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=2.2e-41  Score=338.06  Aligned_cols=191  Identities=38%  Similarity=0.625  Sum_probs=159.1

Q ss_pred             CCcchHHHHHHHhhCCCCHHHHHHHh--hcCCCC-----------CCCC--------------------CChHH---HHH
Q psy6862         118 NFSGSLLWIRKQMANGINPRDVLSHI--LGADAR-----------IPDH--------------------IDDQT---AWR  161 (315)
Q Consensus       118 ~~~g~~~~~~~~~~~g~~~~~il~~~--~~~~~~-----------~p~~--------------------~~~~~---~~~  161 (315)
                      +.+|.++||++||+..++...|...+  ||+...           +...                    .+.+.   +.+
T Consensus        73 k~~g~~~f~~~~~~~~~~~~~~~~~~~~lgf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (492)
T 4iao_A           73 KYYGAHKFLDTYLPEDLNSLYIYYLIKLLGFEVKDQALIGTINSIVHINSQERVQDLGSAISVTNVEDPLAKKQTVRLIK  152 (492)
T ss_dssp             HHHHHHHHHHHHSCSSCCTTHHHHHHHHTTEEECCHHHHHHHHHHC---------------------CCSCHHHHHHHHH
T ss_pred             HHhCHHHHHHHhCCCCcchHHHHHHHHHhCCccchHHHHHHHHHHhhhhhhhccccccchhccccccCchhHHHHHHHHH
Confidence            35799999999999999999987654  554210           1000                    01112   222


Q ss_pred             HHH-HhhcCccccccccccccHHHHHHHHHhCCcEEEEcCCCCCccCCCCCcCCCchhhhccccCCCCCCChhhhcchHh
Q psy6862         162 LVL-NMICEPRRRQRLRHIGTFNDVIHLLKTCSKIIVLTGAGVSVSCGIPDFRSRDGIYSRLAVDFPNLPDPQAMFDINY  240 (315)
Q Consensus       162 ~l~-~~~~~~~~r~kl~~~~tLe~l~elI~~Ak~IVVlTGAGISaaSGIPDFRs~~Gly~~l~~~f~~l~dP~emfd~~~  240 (315)
                      .|. .+.++..+|.|+++++++++++++|++|++|||+|||||||+||||||||++|+|+++.+  .++.+|+++|+.++
T Consensus       153 ~l~~~~~r~~~~r~kl~~~~~i~~l~~~L~~ak~IVVLTGAGISTeSGIPDFRs~~GLw~~~~~--~gl~~Pe~v~s~~~  230 (492)
T 4iao_A          153 DLQRAINKVLCTRLRLSNFFTIDHFIQKLHTARKILVLTGAGVSTSLGIPDFRSSEGFYSKIKH--LGLDDPQDVFNYNI  230 (492)
T ss_dssp             HHHHHHHHHHTSCCCCTTCCSHHHHHHHHHHCSCEEEEECGGGGGGGTCCCSSSTTSHHHHHHT--SCCSCGGGGGBHHH
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhCCcEEEEeCcccccccCCccccCchHHHHhhhh--cCCCCHHHhcCHHH
Confidence            222 344667899999999999999999999999999999999999999999999999998754  25678999999999


Q ss_pred             hhcCChHHHHHHHHHcCCCCCCChHHHHHHHHHHcCCcceeeecCccchHhhhCC--CCeeEcCcccc--ccCc
Q psy6862         241 FKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQVAGI--ENVIECHDWVG--VCRR  310 (315)
Q Consensus       241 F~~dP~~Fw~f~r~i~~~~~~Pn~~H~aLa~Le~~Gkl~~VITQNIDgLhqkAG~--~kVIElHGSl~--qC~~  310 (315)
                      |..||+.||+|++++++..++||++|++|++|+++|++.+||||||||||++||+  ++|+|+|||++  +|..
T Consensus       231 F~~dP~~Fy~~~r~~~~~~~~Pn~aH~aLa~Le~~G~l~~VITQNIDgLHqrAG~~s~~ViELHGsl~~~~C~~  304 (492)
T 4iao_A          231 FMHDPSVFYNIANMVLPPEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVT  304 (492)
T ss_dssp             HHHCHHHHHHHGGGGCCCSSCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTCCTTEEEETT
T ss_pred             HhhChHHHHHHHHHhhCCcCCCCHHHHHHHHHHHCCCCceeEeccccchHhhcCCChhhEEeecCccceeecCC
Confidence            9999999999998877777899999999999999999999999999999999998  69999999997  4654
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A* Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A* Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Back     alignment and structure
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Back     alignment and structure
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 315
d1j8fa_ 323 c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Ho 7e-31
d1q1aa_ 289 c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces c 9e-28
d1yc5a1 245 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA 1e-26
d2b4ya1 267 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirt 3e-26
d1ma3a_ 252 c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Arc 2e-25
d1m2ka_ 249 c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Ar 3e-24
d1s5pa_ 235 c.31.1.5 (A:) NAD-dependent deacetylase CobB {Esch 2e-23
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Sirt2 histone deacetylase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 7e-31
 Identities = 66/148 (44%), Positives = 96/148 (64%), Gaps = 7/148 (4%)

Query: 160 WRLVLNMICEPRRRQRLRHIGTFNDVIHLLKT--CSKIIVLTGAGVSVSCGIPDFRSR-D 216
             L    +    +++RL    T   V   +++  C ++I L GAG+S S GIPDFRS   
Sbjct: 9   RNLFSQTLSLGSQKERLLDELTLEGVARYMQSERCRRVICLVGAGISTSAGIPDFRSPST 68

Query: 217 GIYSRLAVDFPNLPDPQAMFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHG 276
           G+Y  L     +LP P+A+F+I+YFK+ P PFF  A+E+YPGQFKP+ CH F+++L+  G
Sbjct: 69  GLYDNLEKY--HLPYPEAIFEISYFKKHPEPFFALAKELYPGQFKPTICHYFMRLLKDKG 126

Query: 277 KLLRNYSQNIDTLEQVAG--IENVIECH 302
            LLR Y+QNIDTLE++AG   E+++E H
Sbjct: 127 LLLRCYTQNIDTLERIAGLEQEDLVEAH 154
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 289 Back     information, alignment and structure
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Length = 245 Back     information, alignment and structure
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Length = 267 Back     information, alignment and structure
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 252 Back     information, alignment and structure
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 249 Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query315
d1j8fa_ 323 Sirt2 histone deacetylase {Human (Homo sapiens) [T 100.0
d1yc5a1 245 NAD-dependent deacetylase NpdA {Thermotoga maritim 100.0
d1m2ka_ 249 AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeo 100.0
d1ma3a_ 252 AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeog 100.0
d1q1aa_ 289 Hst2 {Baker's yeast (Saccharomyces cerevisiae) [Ta 100.0
d2b4ya1 267 NAD-dependent deacetylase sirtuin-5 {Human (Homo s 100.0
d1s5pa_ 235 NAD-dependent deacetylase CobB {Escherichia coli [ 100.0
d1ybha1179 Acetohydroxyacid synthase catalytic subunit {Thale 81.51
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Sirt2 histone deacetylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-40  Score=314.24  Aligned_cols=153  Identities=44%  Similarity=0.828  Sum_probs=129.4

Q ss_pred             HHHHHHHHhhcCccccccccccccHHHHHHHHH--hCCcEEEEcCCCCCccCCCCCcCCC-chhhhccccCCCCCCChhh
Q psy6862         158 TAWRLVLNMICEPRRRQRLRHIGTFNDVIHLLK--TCSKIIVLTGAGVSVSCGIPDFRSR-DGIYSRLAVDFPNLPDPQA  234 (315)
Q Consensus       158 ~~~~~l~~~~~~~~~r~kl~~~~tLe~l~elI~--~Ak~IVVlTGAGISaaSGIPDFRs~-~Gly~~l~~~f~~l~dP~e  234 (315)
                      .+++++.+.+.-.+++.|+....+++.++++|+  +||+|||+|||||||+||||||||+ +|+|+++.+  ..++.|++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~a~~i~~~~~k~IvvlTGAGISt~SGIPDFRs~~~Glw~~~~~--~~l~~~e~   84 (323)
T d1j8fa_           7 FLRNLFSQTLSLGSQKERLLDELTLEGVARYMQSERCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEK--YHLPYPEA   84 (323)
T ss_dssp             HHHHHC-----------CCCSSSSHHHHHHHHHSTTCCCEEEEECGGGTGGGTCCCTTCSCSTTSTTTTT--TCCSSGGG
T ss_pred             HHHHHHHHhhccCCCccccccccCHHHHHHHHHhCCCCeEEEEeCCeeecccCCCCCcCCCCCCccCCcc--cCCCCHHH
Confidence            456667676776778889999999999999998  5899999999999999999999995 699999864  36778999


Q ss_pred             hcchHhhhcCChHHHHHHHHHcCCCCCCChHHHHHHHHHHcCCcceeeecCccchHhhhCC--CCeeEcCcccc--ccCc
Q psy6862         235 MFDINYFKQDPRPFFKFAREIYPGQFKPSPCHRFIKMLERHGKLLRNYSQNIDTLEQVAGI--ENVIECHDWVG--VCRR  310 (315)
Q Consensus       235 mfd~~~F~~dP~~Fw~f~r~i~~~~~~Pn~~H~aLa~Le~~Gkl~~VITQNIDgLhqkAG~--~kVIElHGSl~--qC~~  310 (315)
                      +|+..+|+++|+.||.|++++++.+++||++|++|+.|+++|++.+||||||||||++||+  ++|+|+|||+.  +|.+
T Consensus        85 ~~~~~~f~~~p~~f~~~~~~~~~~~~~Pn~~H~~l~~L~~~g~l~~viTQNIDgLh~~AG~~~~~viElHGsl~~~~C~~  164 (323)
T d1j8fa_          85 IFEISYFKKHPEPFFALAKELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVS  164 (323)
T ss_dssp             GGBHHHHHHCCHHHHHHHHHHSSSSCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEESC
T ss_pred             HhCHHHHHHChHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCCceEEEeccccchhhccCCchhhheeeccccccceecc
Confidence            9999999999999999999998888999999999999999999999999999999999997  68999999997  5764


Q ss_pred             CC
Q psy6862         311 PL  312 (315)
Q Consensus       311 PC  312 (315)
                      .+
T Consensus       165 c~  166 (323)
T d1j8fa_         165 AS  166 (323)
T ss_dssp             TT
T ss_pred             cc
Confidence            33
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure