Psyllid ID: psy6977
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 239 | 2.2.26 [Sep-21-2011] | |||||||
| O49923 | 343 | Adenosine kinase OS=Physc | N/A | N/A | 0.983 | 0.685 | 0.462 | 3e-55 | |
| Q9LZG0 | 345 | Adenosine kinase 2 OS=Ara | yes | N/A | 0.979 | 0.678 | 0.432 | 1e-54 | |
| Q9SF85 | 344 | Adenosine kinase 1 OS=Ara | no | N/A | 0.979 | 0.680 | 0.416 | 2e-52 | |
| Q64640 | 361 | Adenosine kinase OS=Rattu | yes | N/A | 0.983 | 0.650 | 0.433 | 9e-49 | |
| P55264 | 361 | Adenosine kinase OS=Mus m | yes | N/A | 0.983 | 0.650 | 0.425 | 6e-48 | |
| P55263 | 362 | Adenosine kinase OS=Homo | no | N/A | 0.983 | 0.649 | 0.417 | 6e-47 | |
| P55262 | 361 | Adenosine kinase OS=Crice | yes | N/A | 0.983 | 0.650 | 0.409 | 7e-45 | |
| P78825 | 340 | Adenosine kinase OS=Schiz | yes | N/A | 0.995 | 0.7 | 0.366 | 5e-41 | |
| Q54MB5 | 340 | Adenosine kinase OS=Dicty | yes | N/A | 0.958 | 0.673 | 0.351 | 6e-35 | |
| P47143 | 340 | Adenosine kinase OS=Sacch | yes | N/A | 0.945 | 0.664 | 0.380 | 2e-32 |
| >sp|O49923|ADK_PHYPA Adenosine kinase OS=Physcomitrella patens subsp. patens GN=ADK PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 214 bits (546), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 154/253 (60%), Gaps = 18/253 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G VGKD Y D + ASE G+ ++Y + PTGTC VL+ RSLVANL+AAN +
Sbjct: 84 FGCVGKDEYGDRMFKLASEGGVNIRYDVDEDLPTGTCGVLVVKG--ERSLVANLSAANKY 141
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFI--- 117
DHL PEN ++ A+Y Y +GFFLTVSPES++ VAK A + L FI
Sbjct: 142 KIDHLKKPENWAFVEKAKYIYSAGFFLTVSPESMMTVAKHAAETGKYYMINLAAPFICQF 201
Query: 118 -------YLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
+DF EA AFA+ Q ++TED IA+K++ LPK +R+ +IT
Sbjct: 202 FKDPLMELFPYVDFIFGNESEARAFAQVQGWETEDTKVIAVKLAALPKAGGTHKRVAVIT 261
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG P I++++GK TEFPV +P E +VDTN AGDSFVGGFLSQL+ G+ ++ C+ G +
Sbjct: 262 QGTDPTIVAEDGKVTEFPVTPIPKEKLVDTNAAGDSFVGGFLSQLVLGKDIAQCVRAGNY 321
Query: 225 AAQHIIQVSGCTL 237
AA IIQ SGCT
Sbjct: 322 AASVIIQRSGCTF 334
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Can also act on the cytokinin isopentenyladenosine to produce isopentenyladenosine monophosphate. Physcomitrella patens subsp. patens (taxid: 145481) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 2EC: 0 |
| >sp|Q9LZG0|ADK2_ARATH Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 160/252 (63%), Gaps = 18/252 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MG++GKD Y + ++ A+ G+ V Y ++ PTGTC V + G RSL+ANL+AAN +
Sbjct: 88 MGSIGKDKYGEAMKKDATAAGVNVHYYEDESAPTGTCGVCVV--GGERSLIANLSAANCY 145
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFI--- 117
DHL PEN L++ A++YY++GFFLTVSPESI V++ A + L FI
Sbjct: 146 KVDHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVSEHAAANNKVFTMNLSAPFICEF 205
Query: 118 -------YLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
+L +DF EA F++ ++TED+ IA+KIS LPK +R T+IT
Sbjct: 206 FKDVQEKFLPYMDFVFGNETEARTFSRVHGWETEDVEQIAIKISQLPKATGTYKRTTVIT 265
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG P++++++GK ++PV LP E +VDTNGAGD+FVGGF+SQL+K + + C++ G +
Sbjct: 266 QGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFMSQLVKEKSIEECVKAGCY 325
Query: 225 AAQHIIQVSGCT 236
A+ +IQ SGCT
Sbjct: 326 ASNVVIQRSGCT 337
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Essential to sustain methyl recycling. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|Q9SF85|ADK1_ARATH Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 156/252 (61%), Gaps = 18/252 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MG++GKD Y + ++ A+ G+ V Y + PTGTC V + G RSL+ANL+AAN +
Sbjct: 87 MGSIGKDKYGEAMKKDATAAGVYVHYYEDEATPTGTCGVCVL--GGERSLIANLSAANCY 144
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFI--- 117
+HL PEN L++ A++YY++GFFLTVSPESI V + A + L FI
Sbjct: 145 KVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVREHAAANNKVFTMNLSAPFICEF 204
Query: 118 -------------YLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
Y+ + EA F++ ++T+D+ IA+K+S LPK + +R T+IT
Sbjct: 205 FKDVQEKCLPYMDYIFGNETEARTFSRVHGWETDDVEQIAIKMSQLPKASGTYKRTTVIT 264
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG P++++++GK ++PV LP E +VDTNGAGD+FVGGFLSQL+ G+ + C+ G +
Sbjct: 265 QGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFLSQLVHGKGIEECVRAGCY 324
Query: 225 AAQHIIQVSGCT 236
A+ +IQ SGCT
Sbjct: 325 ASNVVIQRSGCT 336
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Essential to sustain methyl recycling. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|Q64640|ADK_RAT Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 SV=3 | Back alignment and function description |
|---|
Score = 193 bits (490), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 151/254 (59%), Gaps = 19/254 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G +G D + +IL+SKA++ + Y + +PTGTCA IT G RSLVANLAAAN +
Sbjct: 103 FGCIGIDKFGEILKSKAADAHVDAHYYEQNEQPTGTCAACIT--GGNRSLVANLAAANCY 160
Query: 61 TPD-HLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA--------LSCTIRNINY 111
+ HL + N L++ A YY++GFFLTVSPES+L+VA+ A L+ + I+
Sbjct: 161 KKEKHLDLENNWMLVEKARVYYIAGFFLTVSPESVLKVARYAAENNRTFTLNLSAPFISQ 220
Query: 112 LHHRFIYLVL--IDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
+ V+ +D EA FA++Q F+T+D+ IA K LPK N R+R I
Sbjct: 221 FFKEALMEVMPYVDILFGNETEAATFAREQGFETKDIKEIARKTQALPKVNSKRQRTVIF 280
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
TQG I++ T FPV E +VDTNGAGD+FVGGFLSQL+ +PL+ CI G
Sbjct: 281 TQGRDDTIVATGNDVTAFPVLDQNQEEIVDTNGAGDAFVGGFLSQLVSNKPLTECIRAGH 340
Query: 224 WAAQHIIQVSGCTL 237
+AA II+ +GCT
Sbjct: 341 YAASVIIRRTGCTF 354
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55264|ADK_MOUSE Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2 | Back alignment and function description |
|---|
Score = 190 bits (483), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 147/254 (57%), Gaps = 19/254 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G +G D + +IL+ KA++ + Y + +PTGTCA IT G RSLVANLAAAN +
Sbjct: 103 FGCIGIDKFGEILKRKAADAHVDAHYYEQNEQPTGTCAACIT--GGNRSLVANLAAANCY 160
Query: 61 TPD-HLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALS----CTIRNINYLHHR 115
+ HL + N L++ A YY++GFFLTVSPES+L+VA+ A T+ +
Sbjct: 161 KKEKHLDLERNWVLVEKARVYYIAGFFLTVSPESVLKVARYAAENNRVFTLNLSAPFISQ 220
Query: 116 FIYLVLIDF------------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
F L+D EA FA++Q F+T+D+ IA K LPK N R+R I
Sbjct: 221 FFKEALMDVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKAQALPKVNSKRQRTVIF 280
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
TQG I++ T FPV E ++DTNGAGD+FVGGFLSQL+ +PL+ CI G
Sbjct: 281 TQGRDDTIVAAENDVTAFPVLDQNQEEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGH 340
Query: 224 WAAQHIIQVSGCTL 237
+AA II+ +GCT
Sbjct: 341 YAASVIIRRTGCTF 354
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55263|ADK_HUMAN Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2 | Back alignment and function description |
|---|
Score = 187 bits (475), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 147/254 (57%), Gaps = 19/254 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G +G D + +IL+ KA+E + Y + +PTGTCA IT G RSL+ANLAAAN +
Sbjct: 104 FGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT--GDNRSLIANLAAANCY 161
Query: 61 TPD-HLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA----------LSCTIRNI 109
+ HL + +N L++ A Y++GFFLTVSPES+L+VA A LS +
Sbjct: 162 KKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQ 221
Query: 110 NYLHHRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
Y + +D EA FA++Q F+T+D+ IA K LPK N R+RI I
Sbjct: 222 FYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIF 281
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
TQG I++ + T F V + ++DTNGAGD+FVGGFLSQL+ +PL+ CI G
Sbjct: 282 TQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGH 341
Query: 224 WAAQHIIQVSGCTL 237
+AA II+ +GCT
Sbjct: 342 YAASIIIRRTGCTF 355
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55262|ADK_CRIGR Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1 SV=2 | Back alignment and function description |
|---|
Score = 180 bits (457), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 148/254 (58%), Gaps = 19/254 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G +G D + +IL+SKA+E + Y + +PTGTCA IT G RSLVANLAAAN +
Sbjct: 103 FGCIGIDKFGEILKSKAAEAHVDAHYYEQNEQPTGTCAACIT--GDNRSLVANLAAANCY 160
Query: 61 TPD-HLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA--------LSCTIRNINY 111
+ HL + N L++ A YY++GFFLTVSPES+L+VA+ A L+ + I+
Sbjct: 161 KKEKHLDLENNWVLVEKARVYYIAGFFLTVSPESVLKVARYAAENNRIFTLNLSAPFISQ 220
Query: 112 LHHRFIYLVL--IDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
+ V+ +D EA FA++Q F+T+D+ IA K L K N R R +
Sbjct: 221 FFKESLMEVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKAQALAKVNSKRPRTVVF 280
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
TQG +++ + F V + ++DTNGAGD+FVGGFLSQL+ +PL+ CI G
Sbjct: 281 TQGRDDTVVATENEVMAFAVLDQNQKEIIDTNGAGDAFVGGFLSQLVYNKPLTECIRAGH 340
Query: 224 WAAQHIIQVSGCTL 237
+AA II+ +GCT
Sbjct: 341 YAASVIIRRTGCTF 354
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Cricetulus griseus (taxid: 10029) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P78825|ADK_SCHPO Adenosine kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ado1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 167 bits (424), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 142/254 (55%), Gaps = 16/254 (6%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
G VG+D ++D+L + GL ++ T PTG CAV++++N K RSL NL AAN +
Sbjct: 79 GCVGQDKFADMLLESNEKAGLRSEFSVDPTTPTGVCAVVLSNNNKNRSLCTNLGAANNYK 138
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFI---- 117
L P K ++ A+ YV GF LTVSPES+L +A+ A I L F+
Sbjct: 139 LKDLQQPNVWKFVEEAKVIYVGGFHLTVSPESMLCLAQHANENNKPYIMNLSAPFLSQFF 198
Query: 118 ------------YLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
Y++ + E L++ + ++ D+ IAL +S++ K N R R+ +ITQ
Sbjct: 199 KEQMDSVIPYCDYVIGNEAEILSYGENHGIKSTDVQEIALALSSVEKVNKKRTRVVVITQ 258
Query: 166 GDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225
G I++++GK T + R+P+E +VDTNGAGD+F GGF++ L +G+ + + G W
Sbjct: 259 GADATIVAKDGKVTTYKPNRVPSEEIVDTNGAGDAFAGGFIAALSQGQGIDYAVTLGHWL 318
Query: 226 AQHIIQVSGCTLGL 239
Q I+VSG TL L
Sbjct: 319 GQECIKVSGTTLPL 332
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|Q54MB5|ADK_DICDI Adenosine kinase OS=Dictyostelium discoideum GN=adk PE=3 SV=2 | Back alignment and function description |
|---|
Score = 147 bits (371), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 132/256 (51%), Gaps = 27/256 (10%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
G VG D + IL++ G+V KYQ + PTG CAVLI N K RS+V NL AAN F
Sbjct: 83 GCVGTDENATILKTATESNGVVTKYQVDSSAPTGACAVLI--NHKERSMVTNLGAANNFK 140
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFIYLVL 121
H E ++ +A+++Y+ G+FLTVSP+S + + K A N + L
Sbjct: 141 IAHFQTEEMKAIVNSAQFFYLVGYFLTVSPDSAVHLGKHA----AENDKPFLYGLAAPFL 196
Query: 122 IDF--------------------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERIT 161
IDF EA ++ N+ EDL IA K++ K N R R
Sbjct: 197 IDFFFDKVSELLPYVDIVFANESEAATLGRKMNWG-EDLTVIAEKLAAWEKVNTKRTRTV 255
Query: 162 IITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIEC 221
+ TQG ++ QNG T++ ++ E ++D N AGDSF GGFL+ G+ ++ C+E
Sbjct: 256 VFTQGPDATLVFQNGVLTKYNPIKVATEDILDLNAAGDSFCGGFLAAYSNGQEIAKCVEA 315
Query: 222 GVWAAQHIIQVSGCTL 237
G +A+ II+ +G T+
Sbjct: 316 GHYASWEIIRQNGATV 331
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P47143|ADK_YEAST Adenosine kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADO1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 142/252 (56%), Gaps = 26/252 (10%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G+VGKD +S+ L ++ + G+ YQ + TG CA LIT G RSLV +L AAN F
Sbjct: 85 FGSVGKDKFSERLLNENEKAGVKSMYQVQNDIGTGKCAALIT--GHNRSLVTDLGAANFF 142
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNIN--YLHHR 115
TPDHL ++ L++ A+ +Y+ GF LTVSP++I+++ + A + + N + ++ H
Sbjct: 143 TPDHLD--KHWDLVEAAKLFYIGGFHLTVSPDAIVKLGQHAKENSKPFVLNFSAPFIPHV 200
Query: 116 FI--------YLVLI---DFEALAF--AKQQNFQTEDLHAIALKISNLPKQNPNRERITI 162
F Y +I + EA AF A Q + DL AIA +I K +P E+ I
Sbjct: 201 FKDALARVLPYATVIIANESEAEAFCDAFQLDCANTDLEAIAQRIV---KDSP-VEKTVI 256
Query: 163 ITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222
T G +P ++ + T+ +PV+ L + +VDTNGAGD+F GGF++ L KGE L I+ G
Sbjct: 257 FTHGVEPTVVVSSKGTSTYPVKPLDSSKIVDTNGAGDAFAGGFMAGLTKGEDLETSIDMG 316
Query: 223 VWAAQHIIQVSG 234
W A IQ G
Sbjct: 317 QWLAALSIQEVG 328
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. ADO1 does not play a major role in adenine utilization in yeast. Its physiological role could primarily be to recycle adenosine produced by the methyl cycle. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 239 | ||||||
| 91088847 | 346 | PREDICTED: similar to CG11255 CG11255-PB | 0.983 | 0.679 | 0.549 | 7e-69 | |
| 157114808 | 344 | adenosine kinase [Aedes aegypti] gi|9446 | 0.983 | 0.683 | 0.561 | 2e-68 | |
| 170038613 | 344 | adenosine kinase 2 [Culex quinquefasciat | 0.983 | 0.683 | 0.545 | 6e-67 | |
| 307187783 | 333 | Adenosine kinase 2 [Camponotus floridanu | 0.979 | 0.702 | 0.559 | 2e-66 | |
| 321475266 | 353 | hypothetical protein DAPPUDRAFT_45130 [D | 0.991 | 0.671 | 0.503 | 9e-66 | |
| 322797538 | 400 | hypothetical protein SINV_05090 [Solenop | 0.979 | 0.585 | 0.543 | 5e-65 | |
| 383848386 | 345 | PREDICTED: adenosine kinase 2-like [Mega | 0.979 | 0.678 | 0.523 | 3e-62 | |
| 289743539 | 344 | adenosine kinase [Glossina morsitans mor | 0.983 | 0.683 | 0.498 | 4e-62 | |
| 332031360 | 365 | Adenosine kinase 2 [Acromyrmex echinatio | 0.979 | 0.641 | 0.519 | 7e-61 | |
| 340725187 | 345 | PREDICTED: adenosine kinase 2-like [Bomb | 0.979 | 0.678 | 0.507 | 1e-60 |
| >gi|91088847|ref|XP_970872.1| PREDICTED: similar to CG11255 CG11255-PB [Tribolium castaneum] gi|270011602|gb|EFA08050.1| hypothetical protein TcasGA2_TC005644 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 139/253 (54%), Positives = 172/253 (67%), Gaps = 18/253 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G VG D YS IL+ KA G+ V YQ++D PTGTCAVLIT G RSL ANLAAAN F
Sbjct: 88 FGCVGTDKYSQILKDKAKADGVNVVYQYNDKVPTGTCAVLIT--GTNRSLCANLAAANCF 145
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFI--- 117
T DH+ PEN KL+++A+Y+Y+SGFF+TVSP+SILEVAK AL+ I L FI
Sbjct: 146 TIDHIRDPENRKLLESAQYFYISGFFITVSPQSILEVAKHALANDRPFIMNLSAPFISQF 205
Query: 118 ----------YLVLI---DFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
Y+ L+ + EA FA +QNF T+DL IALKI NLPKQN NR R+ +IT
Sbjct: 206 YKEPLMQAMPYVDLLFGNETEAETFANEQNFGTKDLKEIALKICNLPKQNENRSRVCVIT 265
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
G P+IL++ GK +EFPV L + +VDTNGAGD+F GGFLSQ I+G+ L VC+ CG+W
Sbjct: 266 TGHNPVILAREGKISEFPVDVLSKDKLVDTNGAGDAFAGGFLSQYIQGQSLDVCVRCGIW 325
Query: 225 AAQHIIQVSGCTL 237
AA I+Q SGCT
Sbjct: 326 AASQIVQRSGCTF 338
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157114808|ref|XP_001652432.1| adenosine kinase [Aedes aegypti] gi|94469260|gb|ABF18479.1| adenosine kinase [Aedes aegypti] gi|108883585|gb|EAT47810.1| AAEL001102-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/253 (56%), Positives = 173/253 (68%), Gaps = 18/253 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G VG+D YSDIL KA++ G+ V+YQ PTGTCAVLIT G RSL ANLAAAN F
Sbjct: 86 FGCVGEDKYSDILLEKATQDGVNVQYQFCRDTPTGTCAVLIT--GTQRSLCANLAAANSF 143
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFI--- 117
T DHL EN K +QNAEY+Y+SGFFLTVS ESIL VAK ALS + L FI
Sbjct: 144 TVDHLKSAENEKYLQNAEYFYISGFFLTVSLESILTVAKHALSKDRLFMMNLSAPFIPQF 203
Query: 118 ----------YLVLI---DFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
Y+ ++ + EALAFA+ Q F TEDL I LKIS LPKQN +R+R+ IIT
Sbjct: 204 FKDNLDQVMPYIDILFGNETEALAFAEAQKFGTEDLKEIGLKISALPKQNESRKRVAIIT 263
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG P++L ++G TEFPV++L A+ +VDTNGAGD+FVGGFL+QL++ CIECG+W
Sbjct: 264 QGSDPVLLIRDGTITEFPVEKLAADQIVDTNGAGDAFVGGFLAQLVQKRNFDTCIECGIW 323
Query: 225 AAQHIIQVSGCTL 237
AA+ IIQ SGCT
Sbjct: 324 AARKIIQRSGCTF 336
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170038613|ref|XP_001847143.1| adenosine kinase 2 [Culex quinquefasciatus] gi|167882342|gb|EDS45725.1| adenosine kinase 2 [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 138/253 (54%), Positives = 172/253 (67%), Gaps = 18/253 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G VG+D YS+IL KAS G+ V+YQ PTGTCAVLIT G RSL ANLAAAN F
Sbjct: 86 FGCVGQDKYSEILSEKASSDGVNVQYQRCKETPTGTCAVLIT--GTQRSLCANLAAANNF 143
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI-------- 109
T DHL PEN K ++ AEY+Y+SGFFLTVS ESIL VAK AL+ + N+
Sbjct: 144 TVDHLTTPENEKYLKEAEYFYISGFFLTVSVESILLVAKRALAQDRPFMMNLSAPFIPQF 203
Query: 110 --NYLHHRFIYLVLI---DFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
+ L F Y+ +I + EALAFA++Q TEDL I LK++ LPKQN R R+ IIT
Sbjct: 204 FKDNLDQVFPYIDIIFGNETEALAFAEKQELGTEDLKEIGLKMAALPKQNSGRGRVVIIT 263
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG P++L Q+GK E+PV++L E +VDTNGAGD+FVGGFL+QL++ E CI+CG+W
Sbjct: 264 QGSDPVLLIQDGKIAEYPVEKLATEQIVDTNGAGDAFVGGFLAQLVQHESYETCIKCGIW 323
Query: 225 AAQHIIQVSGCTL 237
AA+ IIQ SGCT
Sbjct: 324 AARQIIQRSGCTF 336
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307187783|gb|EFN72749.1| Adenosine kinase 2 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/252 (55%), Positives = 169/252 (67%), Gaps = 18/252 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MG VGKD YS ILE KA+ GL V+YQ+ D EPTGTCAVLIT GK RSL ANLAAAN F
Sbjct: 75 MGCVGKDKYSKILEDKATMEGLNVRYQYTDQEPTGTCAVLIT--GKDRSLCANLAAANCF 132
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVAL---SCTIRNIN--YLHHR 115
+ H+ PEN LI A Y YVS FFLTVSPESI VAK A + N++ +L
Sbjct: 133 SLSHIEKPENKHLIDIANYIYVSSFFLTVSPESIQTVAKHAYENNKMFMMNLSAPFLCEF 192
Query: 116 FIYLVLIDF-----------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
F +L F EA AFAK NF T D IALKI N+ K N R RI I+T
Sbjct: 193 FQKPMLAAFPYVDILFGNETEADAFAKSNNFDTMDRKQIALKILNMEKINDKRNRIVILT 252
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG KP++L+++G TEFPV +LP E VVDTNGAGD+FVGGF++QLI+G+ + +CI+CG+W
Sbjct: 253 QGAKPVLLAKDGTVTEFPVIKLPEEKVVDTNGAGDAFVGGFIAQLIQGKSIEICIKCGIW 312
Query: 225 AAQHIIQVSGCT 236
AA I+Q SGCT
Sbjct: 313 AATQIVQRSGCT 324
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|321475266|gb|EFX86229.1| hypothetical protein DAPPUDRAFT_45130 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 129/256 (50%), Positives = 176/256 (68%), Gaps = 19/256 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTG-TCAVLITDNGKARSLVANLAAANL 59
MG VGKD YS+ILE+KA G+ V+YQ+ ++E TG TCAVL+T+NG RSL ANLAAANL
Sbjct: 85 MGCVGKDEYSEILETKARYEGVNVRYQYTESESTGSTCAVLLTENGANRSLCANLAAANL 144
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALS---CTIRNINY----- 111
FT H+ +PEN K I A+++Y++GFFLTV+P++I+EVA+ A + + N++
Sbjct: 145 FTKHHIEIPENRKFIDEADFFYITGFFLTVNPDTIMEVARHANTQNKTLMMNLSAPFLSQ 204
Query: 112 -----LHHRFIYLVLI---DFEALAFAKQQNF--QTEDLHAIALKISNLPKQNPNRERIT 161
+ F Y+ ++ + EA FAK+QN ED+ IAL I+ LPK+N NR RI
Sbjct: 205 FFKEPMMQTFPYIDILFGNETEAETFAKEQNLPVNKEDMSEIALSIAALPKENKNRNRIV 264
Query: 162 IITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIEC 221
IITQG +I++Q+GK T P +P+E +VDTNGAGD+FVGGF+SQ+++G P+ VC C
Sbjct: 265 IITQGKDDVIIAQDGKITRIPAISVPSEKIVDTNGAGDAFVGGFISQILQGRPIDVCARC 324
Query: 222 GVWAAQHIIQVSGCTL 237
GVWAA IIQ GCT
Sbjct: 325 GVWAATQIIQQDGCTF 340
|
Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322797538|gb|EFZ19582.1| hypothetical protein SINV_05090 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 137/252 (54%), Positives = 168/252 (66%), Gaps = 18/252 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MG VG+D YS ILE KA+ GL V+YQ+ D EPTGTCAVLIT GK RSL ANLAAAN F
Sbjct: 142 MGCVGRDKYSKILEDKATTDGLNVRYQYTDQEPTGTCAVLIT--GKERSLCANLAAANCF 199
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVAL---SCTIRNIN--YLHHR 115
+P H+ PEN LI+ A Y YVSGFFLTVSPESI VA+ A + N++ +L
Sbjct: 200 SPLHIEKPENKHLIEIARYIYVSGFFLTVSPESIQTVARHAYENDKMFMMNLSAPFLCEF 259
Query: 116 FIYLVLIDF-----------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
F +L F EA AFAK NF D IALKIS + K N R+RI +IT
Sbjct: 260 FQKPMLAAFPYIDVLFGNETEADAFAKANNFNETDRRQIALKISEMEKINDKRKRIVVIT 319
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG + +I++++G TE+PV +LP E VVDTN AGD+FVGGFL+QLI+G + CI+CG+W
Sbjct: 320 QGAEEVIVAKDGTVTEYPVIKLPEEKVVDTNAAGDAFVGGFLAQLIQGRSIDTCIKCGIW 379
Query: 225 AAQHIIQVSGCT 236
AA I+Q SGCT
Sbjct: 380 AATQIVQRSGCT 391
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383848386|ref|XP_003699832.1| PREDICTED: adenosine kinase 2-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/252 (52%), Positives = 162/252 (64%), Gaps = 18/252 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MG VG D YS ILE +A GL V+YQ+ + EPTGTCAVLIT G RSL ANLAAAN F
Sbjct: 87 MGCVGIDKYSKILEERAKADGLNVRYQYTNKEPTGTCAVLIT--GNDRSLCANLAAANCF 144
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA----------LSCTIRNIN 110
+ H+ PEN KLI+ AEY YVS FFLTVSPE+I VA+ A LS
Sbjct: 145 SLSHIEEPENKKLIEAAEYIYVSSFFLTVSPETIQAVAQHANEKNKMFMMNLSAPFLCEF 204
Query: 111 YLHHRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
Y L +D EA FAK +F T D I LK+S +PK N R+R+ +IT
Sbjct: 205 YKTPMLAALPYVDILFGNETEADTFAKLNDFGTTDRKEITLKLSQMPKVNDKRQRVVVIT 264
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG I+++++ K EFP +LPAE VVDTNGAGD+FVGGFL+QLI+G+ + VCI+CG+W
Sbjct: 265 QGADHILVAKDNKVQEFPAIKLPAEKVVDTNGAGDAFVGGFLAQLIQGKDIEVCIKCGIW 324
Query: 225 AAQHIIQVSGCT 236
AA I+Q SGCT
Sbjct: 325 AATQIVQRSGCT 336
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|289743539|gb|ADD20517.1| adenosine kinase [Glossina morsitans morsitans] | Back alignment and taxonomy information |
|---|
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/253 (49%), Positives = 165/253 (65%), Gaps = 18/253 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G VGKD+Y+ ILE KA++ GL V+YQ+ + PTGTCAVLIT G RSL A+LAAAN F
Sbjct: 86 FGCVGKDDYAKILEKKATQDGLNVRYQYTNEAPTGTCAVLIT--GTHRSLCAHLAAANHF 143
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA----------LSCTIRNIN 110
T DHL P++ +L+++A+Y+Y+SGFFLTVSP SI+E+A+ A LS +
Sbjct: 144 TIDHLQKPDSRQLLESADYFYISGFFLTVSPPSIIEIARHAHKRKRTFMMNLSAPFVSQY 203
Query: 111 YLHHRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
Y +V +D E FA++ ++ +D I K+ LPK+N RERI IIT
Sbjct: 204 YKEQLMAAMVYVDILFGNEEEVETFAREHSWHAKDRKEIGQKLLTLPKENSERERIVIIT 263
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG P++L Q EFPVQ+L E +VDTNGAGD+FVGGFL+Q IK + L VC+ CG+W
Sbjct: 264 QGHYPVLLFQGNNIKEFPVQQLSREQLVDTNGAGDAFVGGFLAQYIKKKSLDVCVRCGIW 323
Query: 225 AAQHIIQVSGCTL 237
AA IIQ SGCT
Sbjct: 324 AASQIIQRSGCTF 336
|
Source: Glossina morsitans morsitans Species: Glossina morsitans Genus: Glossina Family: Glossinidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332031360|gb|EGI70873.1| Adenosine kinase 2 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 131/252 (51%), Positives = 161/252 (63%), Gaps = 18/252 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MG VGKD YS ILE KA GL V+YQ+ D EPTGTCAVLIT GK RSL ANLAAAN F
Sbjct: 107 MGCVGKDKYSKILEDKAMADGLNVRYQYTDQEPTGTCAVLIT--GKERSLCANLAAANCF 164
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVAL---SCTIRNIN--YLHHR 115
+ H+ PEN LI A Y Y+SGFFLTVSPESI VAK A + N++ +L
Sbjct: 165 SQSHIEKPENKHLIDIARYIYISGFFLTVSPESIQTVAKHAYENDKMFMMNLSAPFLCEF 224
Query: 116 FIYLVLIDF-----------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
F +L F EA FAK N + IALKIS + K N R+RI +IT
Sbjct: 225 FQEPMLAAFPYVDILFGNETEADTFAKTNNLNATNRRQIALKISEMDKINNKRKRIVVIT 284
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG ++L+++G TE+P+ +LP E VVDTN AGD+FVGGFL+QLI+ + + CI+CG+W
Sbjct: 285 QGTDAVLLAKDGTVTEYPIIKLPEEKVVDTNAAGDAFVGGFLAQLIQDKSIDTCIKCGIW 344
Query: 225 AAQHIIQVSGCT 236
AA I+Q GCT
Sbjct: 345 AATQIVQKFGCT 356
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340725187|ref|XP_003400955.1| PREDICTED: adenosine kinase 2-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 160/252 (63%), Gaps = 18/252 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MG VG D YS ILE KA GL V+YQ+ EPTGTCAVLIT G RSL ANLAAA F
Sbjct: 87 MGCVGIDKYSKILEDKARADGLNVRYQYTKKEPTGTCAVLIT--GNERSLCANLAAATCF 144
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFI--- 117
+P H+ EN ++I+ AEY Y+SGFFLTVSPE+ L +A+ AL I L F+
Sbjct: 145 SPSHIEESENKRIIEMAEYIYISGFFLTVSPETTLMIAQHALEKNKMFIMNLSAPFLCEY 204
Query: 118 -------YLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
L +D EA FAK +F+T D IALK+S + K N R+RI IIT
Sbjct: 205 YKKPMLEALPYVDILFGNEAEADTFAKANDFKTTDRKEIALKLSQMEKLNKKRQRIVIIT 264
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG I++ ++ E P RLP + VVDTNGAGD+FVGGFL+QL++G+ + VCI+CG+W
Sbjct: 265 QGPDNILVVKDNTIIEIPATRLPNDKVVDTNGAGDAFVGGFLAQLVQGKSIEVCIKCGIW 324
Query: 225 AAQHIIQVSGCT 236
AA I+Q SGCT
Sbjct: 325 AATQIVQRSGCT 336
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 239 | ||||||
| FB|FBgn0036337 | 348 | CG11255 [Drosophila melanogast | 0.974 | 0.669 | 0.494 | 8.9e-54 | |
| WB|WBGene00011128 | 342 | R07H5.8 [Caenorhabditis elegan | 0.974 | 0.681 | 0.480 | 1e-52 | |
| UNIPROTKB|Q93934 | 342 | R07H5.8 "Protein R07H5.8" [Cae | 0.974 | 0.681 | 0.480 | 1e-52 | |
| TAIR|locus:2142609 | 345 | ADK2 "adenosine kinase 2" [Ara | 0.974 | 0.675 | 0.434 | 7.4e-50 | |
| TAIR|locus:2085079 | 344 | ADK1 "adenosine kinase 1" [Ara | 0.974 | 0.677 | 0.422 | 4.7e-48 | |
| ZFIN|ZDB-GENE-030131-948 | 345 | adkb "adenosine kinase b" [Dan | 0.970 | 0.672 | 0.426 | 7.3e-43 | |
| ZFIN|ZDB-GENE-030425-3 | 359 | adka "adenosine kinase a" [Dan | 0.974 | 0.649 | 0.416 | 3.2e-42 | |
| UNIPROTKB|Q5ZMK9 | 359 | ADK "Uncharacterized protein" | 0.970 | 0.646 | 0.426 | 6.6e-42 | |
| UNIPROTKB|F1N468 | 345 | ADK "Uncharacterized protein" | 0.979 | 0.678 | 0.410 | 2e-40 | |
| UNIPROTKB|F1PJV5 | 362 | ADK "Uncharacterized protein" | 0.979 | 0.646 | 0.402 | 4.2e-40 |
| FB|FBgn0036337 CG11255 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 124/251 (49%), Positives = 155/251 (61%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
G VG+D Y++IL+ KA GL V YQ PTGTCAVLIT G RSL ANLAAAN FT
Sbjct: 91 GCVGEDRYANILKEKAQAAGLDVHYQVKKDVPTGTCAVLIT--GTHRSLCANLAAANNFT 148
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA----------LSCTIRNINY 111
DHL P N L+ NA+YYY+SGFFLTV+P SI++VA A LS + Y
Sbjct: 149 IDHLEEPSNKALVDNAQYYYISGFFLTVNPPSIMQVAATAHAKQRPFLMNLSAPFISQFY 208
Query: 112 LHHRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
+ L +D EA AFA+ Q + + DL I ++ + K+NP R RI I+TQ
Sbjct: 209 MAPLLAALPYVDIIFGNEAEAQAFAEAQQWPSGDLREIGKRLVAMEKKNPTRPRIAILTQ 268
Query: 166 GDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225
G P++L Q EFPV +L +VDTNGAGD+FVGGFLSQ ++G+ L VCI CG +A
Sbjct: 269 GCDPVLLIQQDSVQEFPVTKLAVHEIVDTNGAGDAFVGGFLSQFVQGKSLDVCIRCGNYA 328
Query: 226 AQHIIQVSGCT 236
A HII+ GCT
Sbjct: 329 AGHIIKNPGCT 339
|
|
| WB|WBGene00011128 R07H5.8 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 121/252 (48%), Positives = 164/252 (65%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
GAVGKD Y D+L SKA E G+ V YQ ++T TGTCA LI NG RSL A+LAAAN FT
Sbjct: 87 GAVGKDQYGDLLASKAKEAGVNVHYQINETVKTGTCAALI--NGTHRSLCAHLAAANTFT 144
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAK--VALSCTIR-NIN--YLHHRF 116
DHL EN K+I+ A+Y+YV+GFF+TV P +IL++A + T N++ ++ F
Sbjct: 145 QDHLQKEENQKIIEQAKYFYVTGFFITVCPPAILQLASHSAEFNKTFTLNLSAPFISQFF 204
Query: 117 I-----YLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
+ L+D EA AFAK ++T + IALK + LPK++ + R+ + TQ
Sbjct: 205 FDKLSEIIPLVDVLFGNEDEAAAFAKANGWETTCVKEIALKAAALPKKS-TKPRLVVFTQ 263
Query: 166 GDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225
G +P+I+ + K TEFPV RLP E +VDTNGAGD+FVGGFLSQ I+G+ + + CG +A
Sbjct: 264 GPEPVIVVEGDKVTEFPVTRLPKEEIVDTNGAGDAFVGGFLSQFIQGKGVEASVTCGSYA 323
Query: 226 AQHIIQVSGCTL 237
AQ II+ GCT+
Sbjct: 324 AQEIIKKHGCTV 335
|
|
| UNIPROTKB|Q93934 R07H5.8 "Protein R07H5.8" [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 121/252 (48%), Positives = 164/252 (65%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
GAVGKD Y D+L SKA E G+ V YQ ++T TGTCA LI NG RSL A+LAAAN FT
Sbjct: 87 GAVGKDQYGDLLASKAKEAGVNVHYQINETVKTGTCAALI--NGTHRSLCAHLAAANTFT 144
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAK--VALSCTIR-NIN--YLHHRF 116
DHL EN K+I+ A+Y+YV+GFF+TV P +IL++A + T N++ ++ F
Sbjct: 145 QDHLQKEENQKIIEQAKYFYVTGFFITVCPPAILQLASHSAEFNKTFTLNLSAPFISQFF 204
Query: 117 I-----YLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
+ L+D EA AFAK ++T + IALK + LPK++ + R+ + TQ
Sbjct: 205 FDKLSEIIPLVDVLFGNEDEAAAFAKANGWETTCVKEIALKAAALPKKS-TKPRLVVFTQ 263
Query: 166 GDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225
G +P+I+ + K TEFPV RLP E +VDTNGAGD+FVGGFLSQ I+G+ + + CG +A
Sbjct: 264 GPEPVIVVEGDKVTEFPVTRLPKEEIVDTNGAGDAFVGGFLSQFIQGKGVEASVTCGSYA 323
Query: 226 AQHIIQVSGCTL 237
AQ II+ GCT+
Sbjct: 324 AQEIIKKHGCTV 335
|
|
| TAIR|locus:2142609 ADK2 "adenosine kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 110/253 (43%), Positives = 163/253 (64%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MG++GKD Y + ++ A+ G+ V Y ++ PTGTC V + G RSL+ANL+AAN +
Sbjct: 88 MGSIGKDKYGEAMKKDATAAGVNVHYYEDESAPTGTCGVCVV--GGERSLIANLSAANCY 145
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAK-VALSCTIRNINYLHHRFI-- 117
DHL PEN L++ A++YY++GFFLTVSPESI V++ A + + +N L FI
Sbjct: 146 KVDHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVSEHAAANNKVFTMN-LSAPFICE 204
Query: 118 --------YLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
+L +DF EA F++ ++TED+ IA+KIS LPK +R T+I
Sbjct: 205 FFKDVQEKFLPYMDFVFGNETEARTFSRVHGWETEDVEQIAIKISQLPKATGTYKRTTVI 264
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
TQG P++++++GK ++PV LP E +VDTNGAGD+FVGGF+SQL+K + + C++ G
Sbjct: 265 TQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFMSQLVKEKSIEECVKAGC 324
Query: 224 WAAQHIIQVSGCT 236
+A+ +IQ SGCT
Sbjct: 325 YASNVVIQRSGCT 337
|
|
| TAIR|locus:2085079 ADK1 "adenosine kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 107/253 (42%), Positives = 160/253 (63%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MG++GKD Y + ++ A+ G+ V Y + PTGTC V + G RSL+ANL+AAN +
Sbjct: 87 MGSIGKDKYGEAMKKDATAAGVYVHYYEDEATPTGTCGVCVL--GGERSLIANLSAANCY 144
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAK-VALSCTIRNINYLHHRFIY- 118
+HL PEN L++ A++YY++GFFLTVSPESI V + A + + +N L FI
Sbjct: 145 KVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVREHAAANNKVFTMN-LSAPFICE 203
Query: 119 ---------LVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
L +D+ EA F++ ++T+D+ IA+K+S LPK + +R T+I
Sbjct: 204 FFKDVQEKCLPYMDYIFGNETEARTFSRVHGWETDDVEQIAIKMSQLPKASGTYKRTTVI 263
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
TQG P++++++GK ++PV LP E +VDTNGAGD+FVGGFLSQL+ G+ + C+ G
Sbjct: 264 TQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFLSQLVHGKGIEECVRAGC 323
Query: 224 WAAQHIIQVSGCT 236
+A+ +IQ SGCT
Sbjct: 324 YASNVVIQRSGCT 336
|
|
| ZFIN|ZDB-GENE-030131-948 adkb "adenosine kinase b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 108/253 (42%), Positives = 147/253 (58%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLIT-DNGKARSLVANLAAANLF 60
G +G D++ +IL+ KA+E + Y + EPTGTCA IT DN + +A N
Sbjct: 88 GCIGTDHFGEILKQKAAEAHVDAHYYEQNQEPTGTCAACITGDNRSLVANLAAANCYN-- 145
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT-IRNINYLHHRFI-- 117
HL + N L++ A YY++GFFLTVSP+SIL+VAK A I +N L FI
Sbjct: 146 KEKHLDIDRNWSLVEKARVYYIAGFFLTVSPDSILKVAKHASDNNKIFGLN-LSAPFISQ 204
Query: 118 -----------YLVLI---DFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
Y+ +I + EA FAK+Q F+TED+ IA ++ NLPK N NR+RI +
Sbjct: 205 FSKEPLMKVLPYVDIIFGNETEAATFAKEQGFETEDIAEIAHRVQNLPKVNKNRQRIVVF 264
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
TQG + + + K FPV + +VDTNGAGD+FVGGFLS L++ +PL CI G
Sbjct: 265 TQGREDTVATVGDKVKMFPVLDIDQNDIVDTNGAGDAFVGGFLSALVQDQPLEECIRAGH 324
Query: 224 WAAQHIIQVSGCT 236
+AA II+ SGCT
Sbjct: 325 YAAHVIIRRSGCT 337
|
|
| ZFIN|ZDB-GENE-030425-3 adka "adenosine kinase a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 105/252 (41%), Positives = 148/252 (58%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLIT-DNGKARSLVANLAAANLF 60
G +GKD + IL+ KA E + Y EPTG+CA IT DN + +A AA
Sbjct: 102 GCIGKDKFGKILKEKAEEAHVDAHYYEQSEEPTGSCAACITGDNRSLVANLA--AANCYK 159
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA-----LSCTIRNINYLHHR 115
HL + EN KL++ A+ YY++GFFLTVS ESIL+VAK A + C + ++
Sbjct: 160 KEKHLDLEENWKLVEKAQVYYIAGFFLTVSLESILKVAKHASENNKIFCLNLSAPFICEF 219
Query: 116 F---IYLVL--IDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
F + V+ +D EA AFA++Q F+TED+ IA K +LPK+N R+RI + T
Sbjct: 220 FKEALMKVMPYVDILFGNETEAAAFAREQGFETEDIEEIAKKAQSLPKENKKRQRIVVFT 279
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG + ++++ K FPV + +VDTNGAGD+FVGGFLSQL++ + CI G +
Sbjct: 280 QGKEGTVMAKGDKVETFPVLEIDQSEIVDTNGAGDAFVGGFLSQLVQDKTFEQCIRAGHY 339
Query: 225 AAQHIIQVSGCT 236
AA II+ +GCT
Sbjct: 340 AANVIIRHAGCT 351
|
|
| UNIPROTKB|Q5ZMK9 ADK "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 108/253 (42%), Positives = 149/253 (58%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLIT-DNGKARSLVANLAAANLF 60
G +GKD + +IL+ KA E + Y EPTGTCA IT DN + +A AA
Sbjct: 102 GCIGKDKFGEILKKKAEEAHVDAHYYEQSEEPTGTCAACITSDNRSLVANLA--AANCYK 159
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVA-KVALSCTIRNINYLHHRFI-- 117
HL + +N KL++ A+ YY++GFFLTVSPE++L+VA + + + I ++N L FI
Sbjct: 160 KEKHLDLEKNWKLVEKAKVYYIAGFFLTVSPEAVLKVATQASANNKIFSLN-LSAPFISQ 218
Query: 118 -----------YL-VLI--DFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
Y+ VL + EA FA++Q F+TED+ IA K LPK N R+RI I
Sbjct: 219 FYKEPMMKVMPYVDVLFGNETEAATFAREQGFETEDIKEIARKTQALPKVNTKRQRIVIF 278
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
TQG + +++ + T FPV +VDTNGAGD+FVGGFLSQL+ P++ CI G
Sbjct: 279 TQGKEDTVMATENEVTTFPVLVSDQSEIVDTNGAGDAFVGGFLSQLVYDRPVTECIRAGH 338
Query: 224 WAAQHIIQVSGCT 236
+AA II+ SGCT
Sbjct: 339 YAASVIIKRSGCT 351
|
|
| UNIPROTKB|F1N468 ADK "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 103/251 (41%), Positives = 142/251 (56%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
G +G D + +IL+ KA+E + Y + +PTGTCA IT G + AA
Sbjct: 88 GCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGTCAACIT-GGNRSLVANLAAANCYKK 146
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA--------LSCTIRNINYLH 113
HL + +N L+ A YY++GFFLTVSPES+L+VA A L+ + I+ +
Sbjct: 147 EKHLDMEKNWMLVDKARVYYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFY 206
Query: 114 HRFIYLVL--IDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
+ V+ +D EA AFA++Q F+TED+ IA K LPK N R+RI I TQ
Sbjct: 207 KESLMKVMPFVDILFGNEMEAAAFAREQGFETEDIKEIARKTQALPKVNSKRQRIVIFTQ 266
Query: 166 GDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225
G + IL+ + T F V +VDTNGAGD+FVGGFLSQL+ +PL+ CI G +A
Sbjct: 267 GREDTILATESEVTAFAVLDQDQTEIVDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYA 326
Query: 226 AQHIIQVSGCT 236
A II+ +GCT
Sbjct: 327 ASVIIRRTGCT 337
|
|
| UNIPROTKB|F1PJV5 ADK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 101/251 (40%), Positives = 145/251 (57%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
G +G D + +IL+ KA+E + Y + + TGTCAV IT + ++ + AA
Sbjct: 105 GCIGTDTFGEILKKKAAEAHVDAHYYEQNEQTTGTCAVCITGSNRSL-VANLAAANCYKK 163
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA--------LSCTIRNINYLH 113
HL + +N L++ A YY++GFFLTVSPES+L+VA A L+ + I+ +
Sbjct: 164 EKHLDMDKNWTLVEKARVYYIAGFFLTVSPESVLKVANHASENNRIFTLNLSAPFISQFY 223
Query: 114 HRFIYLVL--IDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
+ V+ ID EA FA++Q F+TED+ IA K LPK N R+RI I TQ
Sbjct: 224 KESLMKVMPYIDILFGNETEAATFAREQGFETEDIKEIARKTQALPKVNQKRQRIVIFTQ 283
Query: 166 GDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225
G + I++ + T F V + +VDTNGAGD+FVGGFLSQL+ +PL+ CI G +A
Sbjct: 284 GREDTIMATESEVTAFAVLDQDQKEIVDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYA 343
Query: 226 AQHIIQVSGCT 236
A II+ +GCT
Sbjct: 344 ASVIIRRTGCT 354
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P47143 | ADK_YEAST | 2, ., 7, ., 1, ., 2, 0 | 0.3809 | 0.9456 | 0.6647 | yes | N/A |
| Q54MB5 | ADK_DICDI | 2, ., 7, ., 1, ., 2, 0 | 0.3515 | 0.9581 | 0.6735 | yes | N/A |
| P55262 | ADK_CRIGR | 2, ., 7, ., 1, ., 2, 0 | 0.4094 | 0.9832 | 0.6509 | yes | N/A |
| P55264 | ADK_MOUSE | 2, ., 7, ., 1, ., 2, 0 | 0.4251 | 0.9832 | 0.6509 | yes | N/A |
| Q64640 | ADK_RAT | 2, ., 7, ., 1, ., 2, 0 | 0.4330 | 0.9832 | 0.6509 | yes | N/A |
| P78825 | ADK_SCHPO | 2, ., 7, ., 1, ., 2, 0 | 0.3661 | 0.9958 | 0.7 | yes | N/A |
| Q9LZG0 | ADK2_ARATH | 2, ., 7, ., 1, ., 2, 0 | 0.4325 | 0.9790 | 0.6782 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 239 | |||
| PLN02548 | 332 | PLN02548, PLN02548, adenosine kinase | 3e-90 | |
| PTZ00247 | 345 | PTZ00247, PTZ00247, adenosine kinase; Provisional | 2e-77 | |
| cd01168 | 312 | cd01168, adenosine_kinase, Adenosine kinase (AK) c | 2e-64 | |
| pfam00294 | 298 | pfam00294, PfkB, pfkB family carbohydrate kinase | 8e-41 | |
| COG0524 | 311 | COG0524, RbsK, Sugar kinases, ribokinase family [C | 6e-28 | |
| cd01166 | 294 | cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg | 8e-18 | |
| cd01167 | 295 | cd01167, bac_FRK, Fructokinases (FRKs) mainly from | 5e-17 | |
| cd01941 | 288 | cd01941, YeiC_kinase_like, YeiC-like sugar kinase | 6e-14 | |
| TIGR02152 | 293 | TIGR02152, D_ribokin_bact, ribokinase | 8e-14 | |
| cd01942 | 279 | cd01942, ribokinase_group_A, Ribokinase-like subgr | 2e-13 | |
| cd01174 | 292 | cd01174, ribokinase, Ribokinase catalyses the phos | 2e-13 | |
| cd01940 | 264 | cd01940, Fructoselysine_kinase_like, Fructoselysin | 3e-12 | |
| cd01947 | 265 | cd01947, Guanosine_kinase_like, Guanosine kinase-l | 5e-08 | |
| cd00287 | 196 | cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup | 3e-07 | |
| PRK09813 | 260 | PRK09813, PRK09813, fructoselysine 6-kinase; Provi | 5e-07 | |
| cd01944 | 289 | cd01944, YegV_kinase_like, YegV-like sugar kinase | 1e-06 | |
| PRK09434 | 304 | PRK09434, PRK09434, aminoimidazole riboside kinase | 1e-06 | |
| cd01945 | 284 | cd01945, ribokinase_group_B, Ribokinase-like subgr | 2e-06 | |
| PLN02323 | 330 | PLN02323, PLN02323, probable fructokinase | 6e-05 | |
| cd01937 | 254 | cd01937, ribokinase_group_D, Ribokinase-like subgr | 9e-05 | |
| PLN02379 | 367 | PLN02379, PLN02379, pfkB-type carbohydrate kinase | 1e-04 | |
| PRK11142 | 306 | PRK11142, PRK11142, ribokinase; Provisional | 2e-04 | |
| COG1105 | 310 | COG1105, FruK, Fructose-1-phosphate kinase and rel | 5e-04 | |
| cd01164 | 289 | cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr | 6e-04 | |
| TIGR03168 | 303 | TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki | 7e-04 | |
| PTZ00292 | 326 | PTZ00292, PTZ00292, ribokinase; Provisional | 8e-04 | |
| PLN02630 | 335 | PLN02630, PLN02630, pfkB-type carbohydrate kinase | 0.002 | |
| cd01939 | 290 | cd01939, Ketohexokinase, Ketohexokinase (fructokin | 0.003 | |
| cd01946 | 277 | cd01946, ribokinase_group_C, Ribokinase-like subgr | 0.003 |
| >gnl|CDD|178163 PLN02548, PLN02548, adenosine kinase | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 3e-90
Identities = 120/255 (47%), Positives = 163/255 (63%), Gaps = 20/255 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MG +GKD + + ++ A+ G+ V Y ++ PTGTCAVL+ G RSLVANL+AAN +
Sbjct: 75 MGCIGKDKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVLV--VGGERSLVANLSAANCY 132
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVAL-SCTIRNINYLHHRFI-- 117
+HL PEN L++ A++YY++GFFLTVSPESI+ VA+ A + +N L FI
Sbjct: 133 KVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIMLVAEHAAANNKTFMMN-LSAPFICE 191
Query: 118 --------YLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
L +DF EA FAK Q ++TED+ IALKIS LPK + +R +I
Sbjct: 192 FFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPKASGTHKRTVVI 251
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
TQG P +++++GK EFPV LP E +VDTNGAGD+FVGGFLSQL++G+ + C+ G
Sbjct: 252 TQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQGKDIEECVRAGN 311
Query: 224 WAAQHIIQVSGCTLG 238
+AA IIQ SGCT
Sbjct: 312 YAANVIIQRSGCTYP 326
|
Length = 332 |
| >gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional | Back alignment and domain information |
|---|
Score = 236 bits (605), Expect = 2e-77
Identities = 105/251 (41%), Positives = 150/251 (59%), Gaps = 18/251 (7%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
G VG D +++IL+ A + G+ + +++ PTGTCAVL+ GK RSLVANL AAN +
Sbjct: 87 GCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGTCAVLVC--GKERSLVANLGAANHLS 144
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA-----LSCTIRNINYLHHRF 116
+H+ + I+ A+ YY+ GFFLTVSP ++L+VAK A L C + ++ F
Sbjct: 145 AEHMQSHAVQEAIKTAQLYYLEGFFLTVSPNNVLQVAKHARESGKLFCLNLSAPFISQFF 204
Query: 117 ---IYLVL--IDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
+ VL +D EA FAK + TEDL IA +I+ LPK + R R+ + TQ
Sbjct: 205 FERLLQVLPYVDILFGNEEEAKTFAKAMKWDTEDLKEIAARIAMLPKYSGTRPRLVVFTQ 264
Query: 166 GDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225
G +P +++ T PV L E +VDTNGAGD+FVGGFL+Q G+ + C+E G ++
Sbjct: 265 GPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGKDIDRCVEAGHYS 324
Query: 226 AQHIIQVSGCT 236
AQ IIQ +GCT
Sbjct: 325 AQVIIQHNGCT 335
|
Length = 345 |
| >gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 2e-64
Identities = 95/254 (37%), Positives = 132/254 (51%), Gaps = 32/254 (12%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
+G VG D D L G+ +YQ PTGTCAVL+T + + R++ L AAN
Sbjct: 75 IGRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVLVTPDAE-RTMCTYLGAANEL 133
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVA--------KVALSCTIRNINYL 112
+PD L + L+ A+Y Y+ G+ LTV PE+IL A K+AL+ + I
Sbjct: 134 SPDDL----DWSLLAKAKYLYLEGYLLTVPPEAILLAAEHAKENGVKIALNLSAPFIVQR 189
Query: 113 HHRFIYLVL--IDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
+ +L +D EA A A+ + T D ALK+ L R RI +IT
Sbjct: 190 FKEALLELLPYVDILFGNEEEAEALAEAE---TTDDLEAALKLLAL------RCRIVVIT 240
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG K ++ + G+ +PV +P E +VDTNGAGD+F GGFL L++GEPL CI G +
Sbjct: 241 QGAKGAVVVEGGE--VYPVPAIPVEKIVDTNGAGDAFAGGFLYGLVQGEPLEECIRLGSY 298
Query: 225 AAQHIIQVSGCTLG 238
AA +IQ G L
Sbjct: 299 AAAEVIQQLGPRLP 312
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. . Length = 312 |
| >gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 8e-41
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTE-PTGTCAVLITDNGKARSLVANLAAANL 59
+G VG DN+ + L + G+ Y D + TG +L+ +G+ R++ AA
Sbjct: 56 IGKVGDDNFGEFLLELLKKEGVDTDYVVIDEDTRTGLALILVDGDGE-RTINFYRGAAAD 114
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVA-KVALSCTIRNINYL------ 112
TP+ L L++NA+ Y+SG PE+ LE + A + + N
Sbjct: 115 LTPEEL----PEDLLENADILYLSGSLPLPLPEATLEELIEAAKNGGTFDPNLRDPLWAD 170
Query: 113 ---HHRFIYLVLI----DFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
+ L I + E A ++ E+ A K + + ++T
Sbjct: 171 LEVLLELLPLADILKPNEEELEALTGEKINDIEEALAALHKHAK-------GVKTVVVTL 223
Query: 166 GDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225
G +L E V +P VVDT GAGD+FV GFL+ L+ G+ L +
Sbjct: 224 GADGALLVDGDG--EVHVPPVPKVKVVDTTGAGDAFVAGFLAGLLAGKSLEEALRFANAV 281
Query: 226 AQHIIQVSGCTLGL 239
A ++Q +G L
Sbjct: 282 AALVVQKTGAISSL 295
|
This family includes a variety of carbohydrate and pyrimidine kinases. Length = 298 |
| >gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 6e-28
Identities = 59/255 (23%), Positives = 101/255 (39%), Gaps = 30/255 (11%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTE-PTGTCAVLITDNGKARSLVANLAAANL 59
+GAVG D++ + L + + G+ + D TG +L+ ++G+ + AAA L
Sbjct: 57 IGAVGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGAAALL 116
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALS---------------C 104
TP+ L + + A+ ++SG L + PE++L ++A +
Sbjct: 117 LTPEDL----DEDELAGADVLHISGIQLEIPPEALLAALELAKAAGVTVSFDLNPRPALW 172
Query: 105 TIRNINYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
+ L L + EA ED A A + + ++T
Sbjct: 173 DRELLEELLALADILFPNEEEAELLTGL----EEDAEAAAALLLAKG------VKTVVVT 222
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
G + ++ G PV VVDT GAGD+F GFL+ L++G+ L +
Sbjct: 223 LGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKSLEEALRFANA 282
Query: 225 AAQHIIQVSGCTLGL 239
AA + G L
Sbjct: 283 AAALAVTRPGARPSL 297
|
Length = 311 |
| >gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Score = 79.9 bits (198), Expect = 8e-18
Identities = 58/264 (21%), Positives = 100/264 (37%), Gaps = 48/264 (18%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLV---ANLAA 56
+ AVG D + + ++ G+ + + PTG + I G R ++ A +A
Sbjct: 51 VTAVGDDPFGRFILAELRREGVDTSHVRVDPGRPTGLYFLEIGAGG-ERRVLYYRAG-SA 108
Query: 57 ANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPE------SILEVAKVALSCTIRNIN 110
A+ TP+ L + + A++ ++SG L +S LE AK ++N
Sbjct: 109 ASRLTPEDL----DEAALAGADHLHLSGITLALSESAREALLEALEAAKARGVTVSFDLN 164
Query: 111 Y------------LHHRFIYLVLI------DFEALAFAKQQNFQTEDLHAIALKISNLPK 152
Y + V I + EAL + E A+AL +
Sbjct: 165 YRPKLWSAEEAREALEELLPYVDIVLPSEEEAEALLGDEDPTDAAERALALALGV----- 219
Query: 153 QNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG 212
+ ++ G + ++ G P + VVDT GAGD+F GFL+ L++G
Sbjct: 220 ------KAVVVKLGAEGALVYTGGGRVFVPAYPVE---VVDTTGAGDAFAAGFLAGLLEG 270
Query: 213 EPLSVCIECGVWAAQHIIQVSGCT 236
L + AA ++ G
Sbjct: 271 WDLEEALRFANAAAALVVTRPGDI 294
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. Length = 294 |
| >gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 5e-17
Identities = 54/245 (22%), Positives = 86/245 (35%), Gaps = 45/245 (18%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKAR-SLVANLAAAN 58
+G VG D + D L E G+ + Q PT V + +G+ AA
Sbjct: 48 IGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSFEFYRGPAADL 107
Query: 59 LFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP--ESILEVAKVALSCTIR---NINYLH 113
L + N L+ A+ + L P ++LE+ + A + + N
Sbjct: 108 LLDTEL-----NPDLLSEADILHFGSIALASEPSRSALLELLEAAKKAGVLISFDPNLR- 161
Query: 114 HRFIYLVLIDFEALAFAKQQN------------------FQTEDLHAIALKISNLPKQNP 155
L E A + F ED IA +
Sbjct: 162 -----PPLWRDEEEARERIAELLELADIVKLSDEELELLFGEEDPEEIAALL-----LLF 211
Query: 156 NRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215
+ + ++T+G +L G E P + VVDT GAGD+FV G L+QL+ L
Sbjct: 212 GLKLV-LVTRGADGALLYTKGGVGEVPGIPVE---VVDTTGAGDAFVAGLLAQLLSRGLL 267
Query: 216 SVCIE 220
++ +
Sbjct: 268 ALDED 272
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. Length = 295 |
| >gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 6e-14
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 28/246 (11%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
+ AVG D+ + + ++ + GL V+ + T + ++ +G +A++ L
Sbjct: 55 LSAVGDDSEGESILEESEKAGLNVRGIVFEGRSTASYTAILDKDGDLVVALADMDIYELL 114
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAK--------VALSCT----IRN 108
TPD L + + ++ A+ V + E++ + VA T ++
Sbjct: 115 TPDFL--RKIREALKEAKPIVVDA---NLPEEALEYLLALAAKHGVPVAFEPTSAPKLKK 169
Query: 109 INYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK 168
+ YL H L E A A ED A KI LP I+T G K
Sbjct: 170 LFYLLHAIDLLTPNRAELEALAGALIENNED-ENKAAKILLLPGIK-----NVIVTLGAK 223
Query: 169 PIILSQ---NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225
++LS +T FP + E+VV+ GAGD+FV G ++ L++G L + A
Sbjct: 224 GVLLSSREGGVETKLFPAPQ--PETVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQAA 281
Query: 226 AQHIIQ 231
A ++
Sbjct: 282 AALTLE 287
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 288 |
| >gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 8e-14
Identities = 68/240 (28%), Positives = 98/240 (40%), Gaps = 33/240 (13%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAANL- 59
G VG D + D L G+ +Y PTGT + + D G+ R +V A AN
Sbjct: 52 GKVGDDAFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVV--AGANAE 109
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSC---TIRN----INYL 112
TP+ + E LI ++ + L + E++LE AK+A I N I L
Sbjct: 110 LTPEDIDAAEA--LIAESDIVLLQ---LEIPLETVLEAAKIAKKHGVKVILNPAPAIKDL 164
Query: 113 HHRFIYLVLI------DFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQG 166
+ LV I + E L + + ED A K+ +N IIT G
Sbjct: 165 DDELLSLVDIITPNETEAEILTGIEVTDE--EDAEKAAEKLLEKGVKN------VIITLG 216
Query: 167 DKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226
K +L ++ P ++ A VDT AGD+F G F L +G+ L I AA
Sbjct: 217 SKGALLVSKDESKLIPAFKVKA---VDTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAA 273
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not [Energy metabolism, Sugars]. Length = 293 |
| >gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 2e-13
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 38/248 (15%)
Query: 1 MGAVGKDNYSDILESKASEFGL---VVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAA 57
+ AVG+D + + + E G+ V+ D + TG A ++TD + A
Sbjct: 56 VAAVGEDFHGRLYLEELREEGVDTSHVRVV--DEDSTGV-AFILTDGDDNQIAYFYPGAM 112
Query: 58 NLFTP----------DHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIR 107
+ P D +H+ LI+ A G ++ P E+ +++
Sbjct: 113 DELEPNDEADPDGLADIVHLSSGPGLIELARELAAGGITVSFDPGQ--ELPRLSGEELEE 170
Query: 108 NINYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGD 167
+ L + D+EA ++ +A + R+ ++T G
Sbjct: 171 ILERAD----ILFVNDYEAELLKERTG---LSEAELASGV-----------RVVVVTLGP 212
Query: 168 KPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227
K I+ ++G+ E P +PA VVDT GAGD+F GFL L++G L + G AA
Sbjct: 213 KGAIVFEDGEEVEVPA--VPAVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGNLAAS 270
Query: 228 HIIQVSGC 235
++ G
Sbjct: 271 LKVERRGA 278
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 279 |
| >gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Score = 67.6 bits (166), Expect = 2e-13
Identities = 63/247 (25%), Positives = 92/247 (37%), Gaps = 32/247 (12%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
GAVG D + D L E G+ V Y + PTGT + + ++G+ R +V A L
Sbjct: 57 GAVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGTAVITVDESGENRIVVVPGANGELT 116
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLT---VSPESILEVAKVALSCTIRNI-N---YLH 113
D V +LI A+ L + E++L + A + I N
Sbjct: 117 PAD---VDAALELIAAAD------VLLLQLEIPLETVLAALRAARRAGVTVILNPAPARP 167
Query: 114 HRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGD 167
L L+D EA + ED A + +N I+T G
Sbjct: 168 LPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKN------VIVTLGA 221
Query: 168 KPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227
K +L+ G+ P VDT GAGD+F+G + L +G L I AA
Sbjct: 222 KGALLASGGEVEHVPA---FKVKAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAA 278
Query: 228 HIIQVSG 234
+ G
Sbjct: 279 LSVTRPG 285
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. Length = 292 |
| >gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 3e-12
Identities = 54/243 (22%), Positives = 83/243 (34%), Gaps = 31/243 (12%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
+GAVG D+ + S G+ + + A + +G ++N
Sbjct: 42 IGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGENA-VADVELVDGDRIFGLSNKGGVARE 100
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFL----TVSPESILEVAKVALSCTIRNINY---LH 113
P A+ Y+S F L S E LE A AL I++
Sbjct: 101 HPF------------EADLEYLSQFDLVHTGIYSHEGHLEKALQALVGAGALISFDFSDR 148
Query: 114 HRFIYLVL-IDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIIL 172
YL L + AF + E++ A + + ++ I+T+G+ I
Sbjct: 149 WDDDYLQLVCPYVDFAFFSASDLSDEEVKAKLKEAVS------RGAKLVIVTRGEDGAIA 202
Query: 173 SQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL-SQLIKGEPLSVCIECGVWAAQHIIQ 231
VVDT GAGDSF+ GFL S L G ++ + G A
Sbjct: 203 YDGAVFYS---VAPRPVEVVDTLGAGDSFIAGFLLSLLAGGTAIAEAMRQGAQFAAKTCG 259
Query: 232 VSG 234
G
Sbjct: 260 HEG 262
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. Length = 264 |
| >gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 5e-08
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 156 NRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215
R I+T+G+ IL G+ V A V D+ GAGDSF GF+ L+KG +
Sbjct: 188 PFPRYLIVTEGELGAILYPGGR--YNHVPAKKA-KVPDSTGAGDSFAAGFIYGLLKGWSI 244
Query: 216 SVCIECGVWAAQHIIQ 231
+E G +
Sbjct: 245 EEALELGAQCGAICVS 260
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 265 |
| >gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 3e-07
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 118 YLVLIDFEALAFAKQQNF-QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNG 176
L + EA A +++ E A AL +S PK + I+T G+K I++ G
Sbjct: 112 ILTPNEEEAEALTGRRDLEVKEAAEAAALLLSKGPK-------VVIVTLGEKGAIVATRG 164
Query: 177 KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLI 210
T E V P + VVDT GAGD+F+ + L
Sbjct: 165 GT-EVHVPAFPVK-VVDTTGAGDAFLAALAAGLA 196
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). Length = 196 |
| >gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 5e-07
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 160 ITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219
+ I+T G+ I + + P VVDT GAGDSF+ GFL + G L +
Sbjct: 187 VVIVTLGENGSIAWDGAQFWRQAPE--PVT-VVDTMGAGDSFIAGFLCGWLAGMTLPQAM 243
Query: 220 ECGVWAAQHIIQVSG 234
G A IQ G
Sbjct: 244 AQGTACAAKTIQYHG 258
|
Length = 260 |
| >gnl|CDD|238919 cd01944, YegV_kinase_like, YegV-like sugar kinase | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 1e-06
Identities = 47/250 (18%), Positives = 90/250 (36%), Gaps = 33/250 (13%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
G +G N++D + + G+ + + G L+ +G+ RS ++ A ++
Sbjct: 56 GPLGNGNWADQIRQAMRDEGIEILLPPRGGDDGGCLVALVEPDGE-RSFISISGAEQDWS 114
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFL---TVSPESILEV-----AKVAL----SCTIRNI 109
+ + +Y Y+SG+ L S +LE A L I +I
Sbjct: 115 TEWFATLT----VAPYDYVYLSGYTLASENASKVILLEWLEALPAGTTLVFDPGPRISDI 170
Query: 110 NYLHHRFIYLVLIDFEALAFAKQQ-NFQTEDLHAIALKISNLPKQNPNRERITIITQGDK 168
+ ++ + +++ E A + + + ++ +
Sbjct: 171 P---DTILQALMAKRPIWSCNREEAAIFAERGDPAAEASA---LRIYAKTAAPVVVRLGS 224
Query: 169 --PIILSQNGKTTEFPVQRLPAE--SVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
I +G T +P VDT GAGD+ GG L+ L KG L+ +
Sbjct: 225 NGAWIRLPDGNT-----HIIPGFKVKAVDTIGAGDTHAGGMLAGLAKGMSLADAVLLANA 279
Query: 225 AAQHIIQVSG 234
AA ++ SG
Sbjct: 280 AAAIVVTRSG 289
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 289 |
| >gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 158 ERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQL 209
+ ++T G + +++ G+ FP + VDT GAGD+FV G L+ L
Sbjct: 213 IALLLVTLGAEGVLVHTRGQVQHFPAPSV---DPVDTTGAGDAFVAGLLAGL 261
|
Length = 304 |
| >gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 159 RITIITQGDKPII-LSQNGKTTEFPVQRLPAESV--VDTNGAGDSFVGGFLSQLIKGEPL 215
+T G+ + L ++G+ +PA V VDT GAGD F G F L +G PL
Sbjct: 204 PFVAVTLGEAGCLWLERDGEL-----FHVPAFPVEVVDTTGAGDVFHGAFAHALAEGMPL 258
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . Length = 284 |
| >gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 6e-05
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 6/37 (16%)
Query: 175 NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIK 211
G+ F V+ VDT GAGD+FVGG LSQL K
Sbjct: 250 KGRVEGFKVK------AVDTTGAGDAFVGGLLSQLAK 280
|
Length = 330 |
| >gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 9e-05
Identities = 47/215 (21%), Positives = 77/215 (35%), Gaps = 28/215 (13%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
VG+D + F ++ + T T + T+ G+ R+L+A AA T
Sbjct: 45 TKVGRDYPDKWSD----LFDNGIEVISLLSTETTTFELNYTNEGRTRTLLA-KCAAIPDT 99
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT--IRN-INYLHHRFIY 118
E+ AE + +SP + A ++L +R + +
Sbjct: 100 -------ESPLSTITAEIVILGPVPEEISPSLFRKFAFISLDAQGFLRRANQEKLIKCVI 152
Query: 119 LVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK-PIILSQNGK 177
L L D L+ + + +A I + I+T G++ I NGK
Sbjct: 153 LKLHDVLKLSRVEAE--VISTPTELARLIKETGV------KEIIVTDGEEGGYIFDGNGK 204
Query: 178 TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG 212
T + VVD GAGD F+ FL + G
Sbjct: 205 YTIPA----SKKDVVDPTGAGDVFLAAFLYSRLSG 235
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 254 |
| >gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 1e-04
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 183 VQRLPA---ESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSG 234
V R+PA + VD GAGD F GFL LIKG L C + G + +++ G
Sbjct: 286 VVRVPAIGETNAVDATGAGDLFASGFLYGLIKGLSLEECCKVGACSGGSVVRALG 340
|
Length = 367 |
| >gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 160 ITIITQGDKPIILSQNGKTTEFPVQRLPAESV--VDTNGAGDSFVGGFLSQLIKGEPL 215
+IT G + + LS+NG+ QR+P V VDT AGD+F G ++ L++G+PL
Sbjct: 217 TVLITLGSRGVWLSENGEG-----QRVPGFRVQAVDTIAAGDTFNGALVTALLEGKPL 269
|
Length = 306 |
| >gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 5e-04
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 162 IITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215
I++ G +L P VV T GAGDS V GFL+ L+KG+ L
Sbjct: 219 IVSLGADGALLVTAEGVYFA---SPPKVQVVSTVGAGDSMVAGFLAGLLKGKSL 269
|
Length = 310 |
| >gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 6e-04
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 185 RLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215
P VV T GAGDS V GF++ L +G L
Sbjct: 238 SPPKVKVVSTVGAGDSMVAGFVAGLAQGLSL 268
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. Length = 289 |
| >gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 7e-04
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 187 PAESVVDTNGAGDSFVGGFLSQLIKGEPL 215
P VV+T GAGDS V GFL+ L +G L
Sbjct: 239 PKVEVVNTVGAGDSMVAGFLAGLARGLSL 267
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. Length = 303 |
| >gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 8e-04
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 162 IITQGDKPIILSQNGKTTEFPVQRLPAESV--VDTNGAGDSFVGGFLSQLIKGEPLSVCI 219
IIT G ++ + PV +P + V VDT GAGD FVG + +G+ L
Sbjct: 239 IITLGANGCLIVEKENE---PVH-VPGKRVKAVDTTGAGDCFVGSMAYFMSRGKDLKESC 294
Query: 220 E 220
+
Sbjct: 295 K 295
|
Length = 326 |
| >gnl|CDD|178237 PLN02630, PLN02630, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.002
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 162 IITQGDKPI-ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215
I+T G K I ++G E V PA VD GAGDSF+GGF++ L++G +
Sbjct: 207 IVTNGKKGCRIYWKDG---EMRVPPFPA-IQVDPTGAGDSFLGGFVAGLVQGLAV 257
|
Length = 335 |
| >gnl|CDD|238914 cd01939, Ketohexokinase, Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.003
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 171 ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE-PLSVCIECGVWAAQHI 229
L +G+ P VVDT GAGD+F + L KG LS ++ G A
Sbjct: 226 ALGPDGEYVHSPAH--KPIRVVDTLGAGDTFNAAVIYALNKGPDDLSEALDFGNRVASQK 283
Query: 230 IQVSG 234
G
Sbjct: 284 CTGVG 288
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. Length = 290 |
| >gnl|CDD|238921 cd01946, ribokinase_group_C, Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.003
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 159 RITIITQGDKPIIL-SQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQL 209
+ II +G+ +L + +G F P ESV D GAGD+F GGF+ L
Sbjct: 196 KALIIKRGEYGALLFTDDGY---FAAPAYPLESVFDPTGAGDTFAGGFIGYL 244
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 277 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| PTZ00247 | 345 | adenosine kinase; Provisional | 100.0 | |
| cd01168 | 312 | adenosine_kinase Adenosine kinase (AK) catalyzes t | 100.0 | |
| PLN02548 | 332 | adenosine kinase | 100.0 | |
| KOG2854|consensus | 343 | 100.0 | ||
| PLN02813 | 426 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PRK15074 | 434 | inosine/guanosine kinase; Provisional | 100.0 | |
| PLN02379 | 367 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01174 | 292 | ribokinase Ribokinase catalyses the phosphorylatio | 100.0 | |
| PRK11142 | 306 | ribokinase; Provisional | 100.0 | |
| PLN02341 | 470 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PTZ00292 | 326 | ribokinase; Provisional | 100.0 | |
| cd01172 | 304 | RfaE_like RfaE encodes a bifunctional ADP-heptose | 100.0 | |
| COG0524 | 311 | RbsK Sugar kinases, ribokinase family [Carbohydrat | 100.0 | |
| cd01944 | 289 | YegV_kinase_like YegV-like sugar kinase. Found onl | 100.0 | |
| TIGR03828 | 304 | pfkB 1-phosphofructokinase. This enzyme acts in co | 100.0 | |
| PLN02967 | 581 | kinase | 100.0 | |
| COG1105 | 310 | FruK Fructose-1-phosphate kinase and related fruct | 100.0 | |
| TIGR02152 | 293 | D_ribokin_bact ribokinase. This model describes ri | 100.0 | |
| cd01166 | 294 | KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho | 100.0 | |
| PLN02323 | 330 | probable fructokinase | 100.0 | |
| cd01167 | 295 | bac_FRK Fructokinases (FRKs) mainly from bacteria | 100.0 | |
| TIGR02198 | 315 | rfaE_dom_I rfaE bifunctional protein, domain I. Rf | 100.0 | |
| PLN02543 | 496 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01945 | 284 | ribokinase_group_B Ribokinase-like subgroup B. Fou | 100.0 | |
| PF00294 | 301 | PfkB: pfkB family carbohydrate kinase; InterPro: I | 100.0 | |
| cd01940 | 264 | Fructoselysine_kinase_like Fructoselysine kinase-l | 100.0 | |
| PRK09434 | 304 | aminoimidazole riboside kinase; Provisional | 100.0 | |
| cd01943 | 328 | MAK32 MAK32 kinase. MAK32 is a protein found prima | 100.0 | |
| TIGR03168 | 303 | 1-PFK hexose kinase, 1-phosphofructokinase family. | 100.0 | |
| PRK10294 | 309 | 6-phosphofructokinase 2; Provisional | 100.0 | |
| KOG2855|consensus | 330 | 100.0 | ||
| PRK09850 | 313 | pseudouridine kinase; Provisional | 100.0 | |
| cd01942 | 279 | ribokinase_group_A Ribokinase-like subgroup A. Fou | 100.0 | |
| cd01164 | 289 | FruK_PfkB_like 1-phosphofructokinase (FruK), minor | 100.0 | |
| PRK13508 | 309 | tagatose-6-phosphate kinase; Provisional | 100.0 | |
| PRK09513 | 312 | fruK 1-phosphofructokinase; Provisional | 100.0 | |
| PRK09954 | 362 | putative kinase; Provisional | 100.0 | |
| cd01947 | 265 | Guanosine_kinase_like Guanosine kinase-like sugar | 100.0 | |
| cd01939 | 290 | Ketohexokinase Ketohexokinase (fructokinase, KHK) | 100.0 | |
| TIGR01231 | 309 | lacC tagatose-6-phosphate kinase. This enzyme is p | 100.0 | |
| cd01941 | 288 | YeiC_kinase_like YeiC-like sugar kinase. Found in | 99.98 | |
| PRK09813 | 260 | fructoselysine 6-kinase; Provisional | 99.97 | |
| PRK11316 | 473 | bifunctional heptose 7-phosphate kinase/heptose 1- | 99.97 | |
| cd01946 | 277 | ribokinase_group_C Ribokinase-like subgroup C. Fou | 99.96 | |
| PLN02630 | 335 | pfkB-type carbohydrate kinase family protein | 99.94 | |
| cd01937 | 254 | ribokinase_group_D Ribokinase-like subgroup D. Fou | 99.94 | |
| KOG2947|consensus | 308 | 99.91 | ||
| COG2870 | 467 | RfaE ADP-heptose synthase, bifunctional sugar kina | 99.9 | |
| PRK05756 | 286 | pyridoxamine kinase; Validated | 99.76 | |
| cd01173 | 254 | pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla | 99.75 | |
| cd00287 | 196 | ribokinase_pfkB_like ribokinase/pfkB superfamily: | 99.74 | |
| TIGR00687 | 286 | pyridox_kin pyridoxal kinase. ThiD and related pro | 99.74 | |
| PRK12412 | 268 | pyridoxal kinase; Reviewed | 99.73 | |
| TIGR00097 | 254 | HMP-P_kinase phosphomethylpyrimidine kinase. This | 99.72 | |
| PRK12413 | 253 | phosphomethylpyrimidine kinase; Provisional | 99.71 | |
| cd01169 | 242 | HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim | 99.69 | |
| PRK06427 | 266 | bifunctional hydroxy-methylpyrimidine kinase/ hydr | 99.68 | |
| PRK08176 | 281 | pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy | 99.66 | |
| PRK07105 | 284 | pyridoxamine kinase; Validated | 99.66 | |
| PRK08573 | 448 | phosphomethylpyrimidine kinase; Provisional | 99.65 | |
| PRK12616 | 270 | pyridoxal kinase; Reviewed | 99.64 | |
| PTZ00344 | 296 | pyridoxal kinase; Provisional | 99.48 | |
| PLN02898 | 502 | HMP-P kinase/thiamin-monophosphate pyrophosphoryla | 99.46 | |
| PTZ00347 | 504 | phosphomethylpyrimidine kinase; Provisional | 99.42 | |
| cd01171 | 254 | YXKO-related B.subtilis YXKO protein of unknown fu | 99.36 | |
| PRK09517 | 755 | multifunctional thiamine-phosphate pyrophosphoryla | 99.32 | |
| COG0351 | 263 | ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi | 99.31 | |
| PF08543 | 246 | Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte | 99.3 | |
| TIGR00196 | 272 | yjeF_cterm yjeF C-terminal region, hydroxyethylthi | 99.28 | |
| PRK14713 | 530 | multifunctional hydroxymethylpyrimidine phosphokin | 99.26 | |
| PLN02978 | 308 | pyridoxal kinase | 99.23 | |
| COG2240 | 281 | PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe | 99.14 | |
| cd01170 | 242 | THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T | 99.13 | |
| PTZ00493 | 321 | phosphomethylpyrimidine kinase; Provisional | 98.87 | |
| KOG2599|consensus | 308 | 98.66 | ||
| PRK09355 | 263 | hydroxyethylthiazole kinase; Validated | 98.51 | |
| KOG3009|consensus | 614 | 98.46 | ||
| TIGR00694 | 249 | thiM hydroxyethylthiazole kinase. This model repre | 98.28 | |
| KOG2598|consensus | 523 | 98.25 | ||
| PF01256 | 242 | Carb_kinase: Carbohydrate kinase; InterPro: IPR000 | 97.3 | |
| PRK10565 | 508 | putative carbohydrate kinase; Provisional | 96.81 | |
| COG2145 | 265 | ThiM Hydroxyethylthiazole kinase, sugar kinase fam | 96.21 | |
| PF02110 | 246 | HK: Hydroxyethylthiazole kinase family; InterPro: | 96.06 | |
| PRK03979 | 463 | ADP-specific phosphofructokinase; Provisional | 95.22 | |
| KOG3974|consensus | 306 | 94.63 | ||
| PRK14039 | 453 | ADP-dependent glucokinase; Provisional | 92.26 | |
| COG0063 | 284 | Predicted sugar kinase [Carbohydrate transport and | 91.89 | |
| PRK14038 | 453 | ADP-dependent glucokinase; Provisional | 91.79 | |
| TIGR02045 | 446 | P_fruct_ADP ADP-specific phosphofructokinase. Phos | 91.4 |
| >PTZ00247 adenosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=267.74 Aligned_cols=236 Identities=43% Similarity=0.722 Sum_probs=193.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+++++.|+++||+++++...+.+|+.++++++ .++|+++.+++++..+++++++.....+.+++++++
T Consensus 86 ig~vG~D~~G~~i~~~l~~~GVd~~~~~~~~~~Tg~~~i~v~--~~~r~~~~~~ga~~~l~~~~i~~~~~~~~l~~~~~v 163 (345)
T PTZ00247 86 VGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGTCAVLVC--GKERSLVANLGAANHLSAEHMQSHAVQEAIKTAQLY 163 (345)
T ss_pred EEEeccchhHHHHHHHHHHcCCeeeccccCCCCcEEEEEEEc--CCCcccccCcchhhcCChHHcCcHHHHHHHhhCCEE
Confidence 578999999999999999999999988655668999998886 358888888888889988887753223468899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|++|+.+.++.+.+..+++.+++.| ++|+ |. +.++++++ ++|++|++.|++....+.++.++++
T Consensus 164 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~Dil~~N~~Ea~~l~g~~~~~~~~~~~~~ 243 (345)
T PTZ00247 164 YLEGFFLTVSPNNVLQVAKHARESGKLFCLNLSAPFISQFFFERLLQVLPYVDILFGNEEEAKTFAKAMKWDTEDLKEIA 243 (345)
T ss_pred EEEEEEecccHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEeCHHHHHHHhhccCCCccCHHHHH
Confidence 9999866677889999999999988 6664 32 22556665 9999999999984333345688888
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+.+++.....+++.||||+|++|++++++++.++++++++++.++|||+||||+|+|||++++++|+++++|+++|++
T Consensus 244 ~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTtGAGDaF~agfl~~l~~g~~~~~al~~a~~ 323 (345)
T PTZ00247 244 ARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGKDIDRCVEAGHY 323 (345)
T ss_pred HHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 77765322000157899999999999999999888888888743359999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++++.|++++
T Consensus 324 aAa~~v~~~Ga~~~ 337 (345)
T PTZ00247 324 SAQVIIQHNGCTYP 337 (345)
T ss_pred HHHHHHhccCCCCC
Confidence 99999999999876
|
|
| >cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=257.09 Aligned_cols=221 Identities=41% Similarity=0.623 Sum_probs=188.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+.+++.|+++||+++++...+.+|+.+++++++ +++|+++.+++++..+++++++. +.+++++++
T Consensus 75 i~~vG~D~~g~~i~~~l~~~GV~~~~~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~v 149 (312)
T cd01168 75 IGRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVLVTP-DAERTMCTYLGAANELSPDDLDW----SLLAKAKYL 149 (312)
T ss_pred EEEeccChhHHHHHHHHHHCCCccccccCCCCCceEEEEEEcC-CCceeeecccchhhcCChhHCCH----HHHccCCEE
Confidence 5789999999999999999999999988666789999988876 67888888888888888877753 568899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|++++.+..+++.+..+++.+++.| .+|+ |. +.++++++ ++|++|++.|++. +..+..+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~---~~~~~~~~a 226 (312)
T cd01168 150 YLEGYLLTVPPEAILLAAEHAKENGVKIALNLSAPFIVQRFKEALLELLPYVDILFGNEEEAEALAEA---ETTDDLEAA 226 (312)
T ss_pred EEEEEecCCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEEeCHHHHHHHhCC---CCCChHHHH
Confidence 9999876666688999999999887 5554 21 22555655 9999999999874 224566777
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccC-CCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQR-LPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
+.+.+. |++.||+|+|++|++++++++.+++|+++ + +++||+||||+|+|||++++++|+++++|+++|+
T Consensus 227 ~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~ag~l~~l~~g~~~~~a~~~a~ 297 (312)
T cd01168 227 LKLLAL------RCRIVVITQGAKGAVVVEGGEVYPVPAIPVE---KIVDTNGAGDAFAGGFLYGLVQGEPLEECIRLGS 297 (312)
T ss_pred HHHHhc------CCCEEEEecCCCCeEEEECCEEEeCCCCCCC---CcccCCchHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 888774 88999999999999999988888888887 6 8999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcCC
Q psy6977 224 WAAQHIIQVSGCTLG 238 (239)
Q Consensus 224 ~~a~~~~~~~G~~~~ 238 (239)
++|+.++++.|++.+
T Consensus 298 ~~Aa~~v~~~G~~~~ 312 (312)
T cd01168 298 YAAAEVIQQLGPRLP 312 (312)
T ss_pred HHHHHHHhccCCCCC
Confidence 999999999999864
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. |
| >PLN02548 adenosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=256.31 Aligned_cols=236 Identities=49% Similarity=0.827 Sum_probs=185.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+++++.|+++||+++++...+.+|+.++++++ +++|+++.+.++...+++++++....++.+..++++
T Consensus 75 ig~vG~D~~g~~i~~~L~~~gVd~~~~~~~~~~T~~~~i~~~--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 152 (332)
T PLN02548 75 MGCIGKDKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVLVV--GGERSLVANLSAANCYKVEHLKKPENWALVEKAKFY 152 (332)
T ss_pred EEEEcCChhHHHHHHHHHHcCCceeeeccCCCCCceEEEEEe--cCCceeeeccchhhcCCHHHhcChhhHhHHhhCCEE
Confidence 578999999999999999999999998766678999888875 567777766666666666555432223567899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|++|+.+.++++.+..+++.+++.| ++|+ +. +.++++++ ++|++|+..|++....+.++.++.+
T Consensus 153 ~~~g~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~ 232 (332)
T PLN02548 153 YIAGFFLTVSPESIMLVAEHAAANNKTFMMNLSAPFICEFFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIA 232 (332)
T ss_pred EEEEEEccCCHHHHHHHHHHHHHcCCEEEEECCChhHHHHhHHHHHHHHhhCCEEEecHHHHHHHhCccCCCcccHHHHH
Confidence 9999877777888899999998888 5555 32 22455555 9999999999886444445666666
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+.++.+....+++.||+|+|++|++++++++.+++|+.++++.+++||+||||+|+|||++++++|+++++|+++|++
T Consensus 233 ~~l~~~~~~~g~~~~~vvvT~G~~G~~~~~~~~~~~~pa~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~eal~~a~a 312 (332)
T PLN02548 233 LKISALPKASGTHKRTVVITQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQGKDIEECVRAGNY 312 (332)
T ss_pred HHHHHhhhhccccCCEEEEEeCCCcEEEEECCeEEEeccccCCcCccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 65554211000157899999999999999988888877644333479999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++++.|+++|
T Consensus 313 aAa~~v~~~G~~~~ 326 (332)
T PLN02548 313 AANVIIQRSGCTYP 326 (332)
T ss_pred HHHHHHhccCCCCC
Confidence 99999999999876
|
|
| >KOG2854|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=241.46 Aligned_cols=236 Identities=50% Similarity=0.826 Sum_probs=214.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||.|.+|+++++.+++.||+..+....+.+|+.+.++++ +..|+.+.+-++...++.++++.+++|..++++.++
T Consensus 86 ~GsvG~Dk~ge~l~~~~~~aGv~~~yq~~~d~~TGtCavli~--~~nRSL~anLgAAn~f~~dhl~~~~~~~lveka~v~ 163 (343)
T KOG2854|consen 86 FGSVGKDKFGELLKSKARAAGVNVHYQVKEDGPTGTCAVLIT--GDNRSLCANLGAANCFKVDHLDKEENWALVEKAKVF 163 (343)
T ss_pred EeeccCchHHHHHHHHHHhcCceEEEEeccCCCCceEEEEEe--CCCcchhhccchhhccCHHHhcchhhhhhhhheeEE
Confidence 589999999999999999999999998888889999999998 555999999999999999999888889999999999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hhHH--------HHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NYLH--------HRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~~--------~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|+.|+.+.++|+.+..+.+.+.+.+ .+|+ |+.. +.+||+ +.|++|++.++....+...+..+.+
T Consensus 164 yv~Gffltv~p~ai~~v~qh~~e~~r~~~lnlsapfI~q~~~~~l~~v~~y~DiifgNe~EA~af~~~~~~~t~dv~eia 243 (343)
T KOG2854|consen 164 YVAGFFLTVSPDAIRKVAQHAAENNRVFTLNLSAPFISQFFKDALDKVLPYADIIFGNEDEAAAFARAHGWETKDVKEIA 243 (343)
T ss_pred EEEEEEEEeChHHHHHHHHHHHHhcchhheeccchhHHHHHHHHHHhhcCcceEEEcCHHHHHHHHHhhCCcccchHHHh
Confidence 9999999999999999999988887 6777 6654 555666 9999999999998888888888888
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
.......+.+....+.+++|.|.++++...++..+..|..+++.++++||+||||+|++||++++.+|.++++|++.|..
T Consensus 244 ~~~~~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGDaFvgGFl~~l~qg~~l~~cir~g~~ 323 (343)
T KOG2854|consen 244 LKLSALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGDAFVGGFLSQLVQGKSLEECIRAGSY 323 (343)
T ss_pred hHhhccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 88888777666678899999999999999998888888888888899999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++...|+..|
T Consensus 324 aa~~vi~~~G~~~p 337 (343)
T KOG2854|consen 324 AASHVIRRVGCTVP 337 (343)
T ss_pred HhhheeeccCCCCC
Confidence 99999999999876
|
|
| >PLN02813 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=257.72 Aligned_cols=221 Identities=21% Similarity=0.247 Sum_probs=184.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+++++.|+++||++.++.+.+.+|+.+++++++ +++|+++.+.+++..++++++.. +.+++++++
T Consensus 154 ig~VG~D~~G~~i~~~L~~~GVd~~~~~~~~~~Tg~~~ilv~~-~gertii~~~Ga~~~l~~~~~~~----~~i~~adiv 228 (426)
T PLN02813 154 AGSVGSDPLGDFYRTKLRRANVHFLSQPVKDGTTGTVIVLTTP-DAQRTMLSYQGTSSTVNYDSCLA----SAISKSRVL 228 (426)
T ss_pred EEEeCCChHHHHHHHHHHHcCCcccceecCCCCceEEEEEEcC-CCCceeeeccCchhhCCccccCH----HHHhcCCEE
Confidence 5789999999999999999999999887666789999888876 67888888888777776655432 678899999
Q ss_pred EEeccccccCh--HHHHHHHHHhhhCC---CCCh-h---------hHH-HHhhHH---hcCHHHHHHHHHHcCCCccCHH
Q psy6977 81 YVSGFFLTVSP--ESILEVAKVALSCT---IRNI-N---------YLH-HRFIYL---VLIDFEALAFAKQQNFQTEDLH 141 (239)
Q Consensus 81 ~~~g~~~~~~~--~~~~~~~~~~~~~g---~~~~-p---------~~~-~~~~~~---~~n~~E~~~l~~~~~~~~~~~~ 141 (239)
|++|+...++. +.+..+++.+++.| ++|+ + .++ .+++++ ++|++|+..|++.. ..++.+
T Consensus 229 ~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~~~~~~~~l~~~ll~~vDil~~Ne~Ea~~l~g~~--~~~~~~ 306 (426)
T PLN02813 229 VVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGNYADILFANSDEARALCGLG--SEESPE 306 (426)
T ss_pred EEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcchhhhhHHHHHHHHHhcCCEEEeCHHHHHHHhCCC--CCCCHH
Confidence 99997655443 67888999999888 5554 2 233 333555 99999999998752 224567
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC-CHHHHHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE-PLSVCIE 220 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~-~~~~a~~ 220 (239)
++.+.+.+ +++.||||+|++|++++++++.+++|++++ ++|||+||||+|+|||++++++|+ +++++++
T Consensus 307 ~a~~~L~~-------~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v---~vVDTtGAGDAF~Agfl~~l~~G~~~l~~al~ 376 (426)
T PLN02813 307 SATRYLSH-------FCPLVSVTDGARGSYIGVKGEAVYIPPSPC---VPVDTCGAGDAYAAGILYGLLRGVSDLRGMGE 376 (426)
T ss_pred HHHHHHHc-------CCCEEEEEeCCCCeEEEECCEEEEeCCCCC---CcccCCChHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 77766653 689999999999999999998889998887 899999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHhccCcCC
Q psy6977 221 CGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~~~~ 238 (239)
+|+++|+.++++.|++.+
T Consensus 377 ~A~a~Aa~~v~~~Ga~~~ 394 (426)
T PLN02813 377 LAARVAATVVGQQGTRLR 394 (426)
T ss_pred HHHHHHHHHHcccCCCcC
Confidence 999999999999999875
|
|
| >PRK15074 inosine/guanosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-36 Score=251.49 Aligned_cols=221 Identities=14% Similarity=0.223 Sum_probs=180.0
Q ss_pred CCcccCC-chHHHHHHHHH--hcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKD-NYSDILESKAS--EFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D-~~g~~i~~~l~--~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|+||+| ++|+++++.|+ +.||+++++...+.+|+.+++++++ +++|+++.+.+++..+++++++. ..++++
T Consensus 113 ig~VGdDd~~G~~~~~~L~~~~~GVdt~~v~~~~~~TG~~~VlV~~-dGeRt~~t~~GA~~~Lt~edld~----~~i~~a 187 (434)
T PRK15074 113 LGVMSSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLISE-DGERTFAISPGHMNQLRPESIPE----DVIAGA 187 (434)
T ss_pred EEEeCCCHHHHHHHHHHhhhhhCCccCcceEEcCCCCEEEEEEECC-CCCEEEEEecChhhcCChhHCCH----hHhccC
Confidence 5799999 79999999997 6899999987655689999999987 78999988889989999988874 678999
Q ss_pred eEEEEeccccc-----cChHHHHHHHHHhhhCC---CCCh--hh-------HH--HHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLT-----VSPESILEVAKVALSCT---IRNI--NY-------LH--HRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~-----~~~~~~~~~~~~~~~~g---~~~~--p~-------~~--~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++|++|+.+. ..++.+..+++.+++.| .+|+ +. .+ .+++++ ++|++|+..|++.
T Consensus 188 ~ilyl~Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~~~~v~~~~~~~~e~l~~~vDILf~NeeEa~~LtG~--- 264 (434)
T PRK15074 188 SALVLTAYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGTKFVIEDNPQWWQEFLKEHVSILAMNEDEAEALTGE--- 264 (434)
T ss_pred CEEEEeeeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcchhhccccHHHHHHHHHhcCCEEEcCHHHHHHHhCC---
Confidence 99999998754 23577889999999998 5555 21 11 233344 9999999999875
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-------E------------------------------
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGK-------T------------------------------ 178 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-------~------------------------------ 178 (239)
++++++++.+.+ +++.||||+|++|++++..++ .
T Consensus 265 --~d~eea~~~L~~-------~~~~VVVTlG~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK15074 265 --SDPLLASDKALD-------WVDLVLCTAGPIGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAMRKKDCQNPLR 335 (434)
T ss_pred --CCHHHHHHHHHc-------CCCEEEEEECCCCEEEEecccccccCceeeeccccccccccchhcccchhccccccccc
Confidence 578888887775 468999999999999965221 1
Q ss_pred --EEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC--------------------CHHHHHHHHHHHHHHHHHhccCc
Q psy6977 179 --TEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE--------------------PLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 179 --~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~--------------------~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
.+++++.+.+.++||||||||+|+|||+|+|.+|+ ++.+|+++|+.+|+.++++.|++
T Consensus 336 ~~~~~~~~~~~~~~~vDttGAGD~f~~gfl~~l~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~vi~~~G~~ 415 (434)
T PRK15074 336 VYSHIAPYMGGPEKIMNTNGAGDGALSALLHDITANSYHRSNVPNSSKHKRTYLTYSSLAQVCKYANRVSYEVLNQHSPR 415 (434)
T ss_pred cccccCcccCCCCcceeCCCcHHHHHHHHHHHHHCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 15666611123799999999999999999999997 89999999999999999999997
Q ss_pred CC
Q psy6977 237 LG 238 (239)
Q Consensus 237 ~~ 238 (239)
++
T Consensus 416 ~~ 417 (434)
T PRK15074 416 LS 417 (434)
T ss_pred CC
Confidence 65
|
|
| >PLN02379 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=248.27 Aligned_cols=220 Identities=21% Similarity=0.295 Sum_probs=180.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|+||+|.+|+++++.|++.||+++++.+.+.+|+.+++++++ +++|++..+.++...++++++.. +.+++++++
T Consensus 107 ig~VG~D~~G~~~~~~L~~~GI~~~~~~~~~~~Tg~~~v~v~~-dgert~~~~lg~~~~l~~~~~~~----~~~~~~~~v 181 (367)
T PLN02379 107 IGACGDDEQGKLFVSNMGFSGVDLSRLRAKKGPTAQCVCLVDA-LGNRTMRPCLSSAVKLQADELTK----EDFKGSKWL 181 (367)
T ss_pred EEEeCCChhHHHHHHHHHHcCCCccCcccCCCCCceEEEEECC-CCCccccCCccccccCChhHCCH----HHHhcCCEE
Confidence 5789999999999999999999999887666689999998886 67787766556666676666653 567899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh----------hhHHHHhh--HH---hcCHHHHHHHHHHcCCCccCHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI----------NYLHHRFI--YL---VLIDFEALAFAKQQNFQTEDLHA 142 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~----------p~~~~~~~--~~---~~n~~E~~~l~~~~~~~~~~~~~ 142 (239)
|++ +. ..+++.+.++++.+++.| .+|+ +.++++++ ++ ++|++|+..+++.. ..++.++
T Consensus 182 ~v~-~~-~~~~~~~~~~~~~A~~~g~~v~lD~s~~~~v~~~r~~l~~ll~~~~vDilf~Ne~Ea~~l~~~~--~~~~~~~ 257 (367)
T PLN02379 182 VLR-YG-FYNLEVIEAAIRLAKQEGLSVSLDLASFEMVRNFRSPLLQLLESGKIDLCFANEDEARELLRGE--QESDPEA 257 (367)
T ss_pred EEE-cc-cCCHHHHHHHHHHHHHcCCEEEEeccchhhhhhhhHHHHHHhhcCCccEEEcCHHHHHHHhcCC--CCCCHHH
Confidence 998 42 256788999999999988 4444 33455654 44 99999999998641 1245666
Q ss_pred HHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 143 IALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 143 ~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
+.+.+.+ +++.++||+|++|++++++++.++++++++ .++|||+||||+|+|||+|++++|+++++|+++|
T Consensus 258 ~~~~l~~-------~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~~--~~vVDTtGAGDaFaagfl~gl~~G~~l~~a~~~g 328 (367)
T PLN02379 258 ALEFLAK-------YCNWAVVTLGSKGCIARHGKEVVRVPAIGE--TNAVDATGAGDLFASGFLYGLIKGLSLEECCKVG 328 (367)
T ss_pred HHHHHHh-------cCCEEEEEECCCCeEEEECCEEEEecCCCC--CCcccCCChhHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 6655543 689999999999999999988888888763 2799999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCcCC
Q psy6977 223 VWAAQHIIQVSGCTLG 238 (239)
Q Consensus 223 ~~~a~~~~~~~G~~~~ 238 (239)
+.+|+.++++.|++++
T Consensus 329 ~~aAa~vi~~~G~~~~ 344 (367)
T PLN02379 329 ACSGGSVVRALGGEVT 344 (367)
T ss_pred HHHHHHHHhccCCCCC
Confidence 9999999999999864
|
|
| >cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=241.53 Aligned_cols=223 Identities=25% Similarity=0.333 Sum_probs=184.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.++++++. +++|+++.+.++...+++++++. ....++.+++
T Consensus 56 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 132 (292)
T cd01174 56 IGAVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGTAVITVDE-SGENRIVVVPGANGELTPADVDA--ALELIAAADV 132 (292)
T ss_pred EEEEcCCccHHHHHHHHHHcCCCceEEEEcCCCCceeEEEEEcC-CCceEEEEeCCCCCCCCHHHHHH--HHHhcccCCE
Confidence 57899999999999999999999999965 46689999888876 57788877776665665544432 3356789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h---hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N---YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p---~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+++++ ..+.+.+..+++.+++.| ++|+ + ...++++++ ++|++|+..|++....+.++..++++.+.+
T Consensus 133 v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 209 (292)
T cd01174 133 LLLQL---EIPLETVLAALRAARRAGVTVILNPAPARPLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLA 209 (292)
T ss_pred EEEeC---CCCHHHHHHHHHHHHhcCCEEEEeCCCcCcCcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 99964 345678889999999888 5666 2 234667765 999999999988644334456677777777
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
. |++.||+|+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 210 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GaGD~F~ag~l~~l~~g~~~~~al~~a~~~Aa~~ 280 (292)
T cd01174 210 K------GVKNVIVTLGAKGALLASGGEVEHVPAFKV---KAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAALS 280 (292)
T ss_pred c------CCCEEEEEeCCCceEEEeCCceEEecCCCc---ccCCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 899999999999999999888888888887 8999999999999999999999999999999999999999
Q ss_pred HHhccCcCC
Q psy6977 230 IQVSGCTLG 238 (239)
Q Consensus 230 ~~~~G~~~~ 238 (239)
+++.|+..+
T Consensus 281 ~~~~G~~~~ 289 (292)
T cd01174 281 VTRPGAQPS 289 (292)
T ss_pred hcCcCCCCC
Confidence 999998754
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. |
| >PRK11142 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=244.83 Aligned_cols=222 Identities=23% Similarity=0.308 Sum_probs=182.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+ ++.+|+.++++++. +++|+++.++++...+++++++. ..+.+.++++
T Consensus 59 ~~~vG~D~~g~~i~~~L~~~gV~~~~i~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~ 135 (306)
T PRK11142 59 IACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVND-EGENSIGIHAGANAALTPALVEA--HRELIANADA 135 (306)
T ss_pred EEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCCEEEEEECC-CCCEEEEEeCCccccCCHHHHHH--HHhhhccCCE
Confidence 57899999999999999999999999985 45689999888876 67788777777666676654432 2356789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h---hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N---YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p---~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+++++ ..+.+.+.++++.+++.| ++|+ + ...++++++ ++|++|+..+++....+.++..++++.+.+
T Consensus 136 v~~~~---~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~~ 212 (306)
T PRK11142 136 LLMQL---ETPLETVLAAAKIAKQHGTKVILNPAPARELPDELLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQVLHQ 212 (306)
T ss_pred EEEeC---CCCHHHHHHHHHHHHHcCCEEEEECCCCcccCHHHHhhCCEEcCCHHHHHHHhCCCCCChHHHHHHHHHHHH
Confidence 99964 335677888999999888 4555 2 223566665 999999999987633333456677777776
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
. |++.||+|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 213 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDt~GAGDaF~Agfi~~l~~g~~~~~al~~a~~~Aa~~ 283 (306)
T PRK11142 213 K------GIETVLITLGSRGVWLSENGEGQRVPGFRV---QAVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAAAAIA 283 (306)
T ss_pred h------CCCeEEEEECCCcEEEEeCCcceeccCCCc---ccccCCCchhHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 4 899999999999999998888888888887 7999999999999999999999999999999999999999
Q ss_pred HHhccCcC
Q psy6977 230 IQVSGCTL 237 (239)
Q Consensus 230 ~~~~G~~~ 237 (239)
+++.|++.
T Consensus 284 ~~~~G~~~ 291 (306)
T PRK11142 284 VTRKGAQP 291 (306)
T ss_pred cCCCcccc
Confidence 99999864
|
|
| >PLN02341 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=249.35 Aligned_cols=223 Identities=20% Similarity=0.226 Sum_probs=176.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCC---------CCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--ch
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDT---------EPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PE 69 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~---------~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~ 69 (239)
+|+||+|.+|+++++.|+++||+++++...+ .+|+.+++++++ ++++.++...........+.+.. .+
T Consensus 139 ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~-~ger~~~~~~~~~~~~~~~~~~~l~~~ 217 (470)
T PLN02341 139 IGHVGDEIYGKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDP-LQRHGFCSRADFGPEPAFSWISKLSAE 217 (470)
T ss_pred EEEecCcHHHHHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcC-CCCceeeeccccccccchhhhhcccHH
Confidence 5889999999999999999999999987542 468899999886 55665443221111111111111 12
Q ss_pred hhhcccceeEEEEeccccc-cChHHHHHHHHHhhhCC---CCCh-hh--------------HHHHhhHH---hcCHHHHH
Q psy6977 70 NNKLIQNAEYYYVSGFFLT-VSPESILEVAKVALSCT---IRNI-NY--------------LHHRFIYL---VLIDFEAL 127 (239)
Q Consensus 70 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~-p~--------------~~~~~~~~---~~n~~E~~ 127 (239)
..+.+++++++|++|+.+. ++.+.+..+++.+++.| ++|+ +. +.++++++ ++|++|+.
T Consensus 218 ~~~~l~~adiv~lsg~~~~~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~Dil~~Ne~Ea~ 297 (470)
T PLN02341 218 AKMAIRQSKALFCNGYVFDELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMSDVLLLTSEEAE 297 (470)
T ss_pred HHhhhhcCCEEEEeceeCCcCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhCCEEEecHHHHH
Confidence 3367889999999998653 67888999999999888 5555 21 22555655 99999999
Q ss_pred HHHHHcCCCccCHHHHHHHHhcCCCCCCCC--ceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 128 AFAKQQNFQTEDLHAIALKISNLPKQNPNR--ERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g--~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
.+++. ++.+++++.+.+. | .+.||||+|++|++++++++.+++|++++ +++||+||||+|+|||
T Consensus 298 ~l~g~-----~~~~~a~~~l~~~------g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~v---~vVDTtGAGDaF~Agf 363 (470)
T PLN02341 298 ALTGI-----RNPILAGQELLRP------GIRTKWVVVKMGSKGSILVTRSSVSCAPAFKV---NVVDTVGCGDSFAAAI 363 (470)
T ss_pred HHhCC-----CCHHHHHHHHHhc------CCCCCEEEEeeCCCCeEEEECCeeEEeCCCCc---CCCCCcCccHHHHHHH
Confidence 99875 5677888887753 5 58999999999999999988889999888 8999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
++++++|+++++|+++|+++|+.++++.|++.+
T Consensus 364 l~gll~G~~l~eal~~A~a~aA~~v~~~Ga~~~ 396 (470)
T PLN02341 364 ALGYIHNLPLVNTLTLANAVGAATAMGCGAGRN 396 (470)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCC
Confidence 999999999999999999999999999998743
|
|
| >PTZ00292 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=242.59 Aligned_cols=224 Identities=21% Similarity=0.299 Sum_probs=179.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccc-ee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQN-AE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~-~~ 78 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++.+++|+++.+++++..+++++++. ....+.+ ++
T Consensus 72 is~vG~D~~g~~i~~~l~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~--~~~~i~~~~~ 149 (326)
T PTZ00292 72 VGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVIIPGANNALTPQMVDA--QTDNIQNICK 149 (326)
T ss_pred EEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEeCCccccCCHHHHHH--HHHHhhhhCC
Confidence 57899999999999999999999999965 56689999998874477888887777666676655542 1244566 89
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC---CCCh---h------hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT---IRNI---N------YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p------~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
++++++ ..+.+...++++.+++.| ++|+ + .+.++++++ ++|++|+..+++....+.++..++
T Consensus 150 ~~~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~~~~~~ 226 (326)
T PTZ00292 150 YLICQN---EIPLETTLDALKEAKERGCYTVFNPAPAPKLAEVEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKA 226 (326)
T ss_pred EEEECC---CCCHHHHHHHHHHHHHcCCEEEEECCCCccccccccHHHHHhcCCEEcCCHHHHHHHhCCCCCChhHHHHH
Confidence 998853 345677888999998888 4554 2 233666665 999999999987533233445566
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-EEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGK-TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
.+.+.+. |++.||+|+|++|++++++++ .+++|++++ +++||+||||+|+|||++++++|+++++|+++|
T Consensus 227 ~~~l~~~------g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a 297 (326)
T PTZ00292 227 SKELQQL------GVENVIITLGANGCLIVEKENEPVHVPGKRV---KAVDTTGAGDCFVGSMAYFMSRGKDLKESCKRA 297 (326)
T ss_pred HHHHHHc------CCCeEEEEeCCCcEEEEeCCCceEEccCCcc---ccCCCcchHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 6777664 889999999999999988764 578888887 899999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCcCC
Q psy6977 223 VWAAQHIIQVSGCTLG 238 (239)
Q Consensus 223 ~~~a~~~~~~~G~~~~ 238 (239)
+++|+.++++.|++.+
T Consensus 298 ~a~Aa~~v~~~G~~~~ 313 (326)
T PTZ00292 298 NRIAAISVTRHGTQSS 313 (326)
T ss_pred HHHHHHHcCCCCcccc
Confidence 9999999999998753
|
|
| >cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=240.66 Aligned_cols=228 Identities=18% Similarity=0.186 Sum_probs=176.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~~ 78 (239)
+|.||+|.+|+++++.|+++||+++++...+.+|+.+++++++ + .+.+..+.+....++.+.... ......+++++
T Consensus 59 i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 136 (304)
T cd01172 59 LGVVGDDEAGDLLRKLLEKEGIDTDGIVDEGRPTTTKTRVIAR-N-QQLLRVDREDDSPLSAEEEQRLIERIAERLPEAD 136 (304)
T ss_pred EEEEcCCccHHHHHHHHHhCCCCcceEecCCCCceEEEEEecC-C-cEEEEEecCCCCCCCHHHHHHHHHHHHHhhccCC
Confidence 5789999999999999999999999966566678888777764 3 444443333333333221110 11235678999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcC
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNL 150 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~ 150 (239)
+++++++... ++++.+..+++.+++.+ ++|+ +..+..+++. ++|++|++.+++....+..+++++++.+.+.
T Consensus 137 ~v~~s~~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~ 216 (304)
T cd01172 137 VVILSDYGKGVLTPRVIEALIAAARELGIPVLVDPKGRDYSKYRGATLLTPNEKEAREALGDEINDDDELEAAGEKLLEL 216 (304)
T ss_pred EEEEEcCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCcchhhccCCcEeCCCHHHHHHHhCCCCCChHHHHHHHHHHHHH
Confidence 9999887543 67788889999999887 6676 3333444443 9999999999886433445566777776543
Q ss_pred CCCCCCCceEEEEeeCCCcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 151 PKQNPNRERITIITQGDKPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 151 ~~~~~~g~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
.|++.||||+|++|+++++ +++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 217 -----~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvdttGAGDaf~ag~i~~l~~g~~~~~al~~a~a~Aa~~ 288 (304)
T cd01172 217 -----LNLEALLVTLGEEGMTLFERDGEVQHIPALAK---EVYDVTGAGDTVIATLALALAAGADLEEAAFLANAAAGVV 288 (304)
T ss_pred -----hCCCeEEEEcCCCccEEEcCCCcEEEecCCCC---CCCCCcCccHHHHHHHHHHHHcCCCHHHHHHHHHHHhhee
Confidence 3889999999999999998 677889998887 8999999999999999999999999999999999999999
Q ss_pred HHhccCcCC
Q psy6977 230 IQVSGCTLG 238 (239)
Q Consensus 230 ~~~~G~~~~ 238 (239)
+++.|+..+
T Consensus 289 ~~~~g~~~~ 297 (304)
T cd01172 289 VGKVGTAPV 297 (304)
T ss_pred eecCCCCCc
Confidence 999998754
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. |
| >COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=234.89 Aligned_cols=223 Identities=26% Similarity=0.359 Sum_probs=182.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCC-CCceeEEEEEecCCCceeEeechh-hhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDT-EPTGTCAVLITDNGKARSLVANLA-AANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~-~~t~~~~~~~~~~~~~r~~~~~~~-~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+|.+|+.+++.|+++||+++++...+ .+|+.+.+.+++ +++|.++.+++ +...++++++++ ..+...+
T Consensus 57 ~~~vG~D~~g~~~~~~l~~~GVd~~~~~~~~~~~tg~~~i~~~~-~g~r~~~~~~~~a~~~~~~~~~~~----~~~~~~~ 131 (311)
T COG0524 57 IGAVGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDE-DGERTFVFYRGAAALLLTPEDLDE----DELAGAD 131 (311)
T ss_pred EEEecCcHHHHHHHHHHHHcCCccceEEEcCCCcceEEEEEEcC-CCceeEEEECCcccccCChHHcCh----HHHhhcC
Confidence 4789999999999999999999999998754 489999888887 48888887777 456677776663 5677999
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC-----CCCh-hhH------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT-----IRNI-NYL------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g-----~~~~-p~~------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
++|++++.+..+++....+++.+++.| ++|+ +.+ +++++++ ++|++|+..+++. ..+....
T Consensus 132 ~~~~~~~~l~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~----~~~~~~~ 207 (311)
T COG0524 132 VLHISGIQLEIPPEALLAALELAKAAGVTVSFDLNPRPALWDRELLEELLALADILFPNEEEAELLTGL----EEDAEAA 207 (311)
T ss_pred eeeEEEeecCCChHHHHHHHHHHHHcCCeEEEecCCCccccchhhHHHHHhhCCEEeCCHHHHHHHhCC----CccHHHH
Confidence 999999888877789999999999998 5666 443 3556655 9999999999873 2455555
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
...++. .|++.+|+|+|++|+++++.+...+++.++.++.++|||+||||+|.|||++++++|.++++++++|+
T Consensus 208 ~~~~~~------~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~~~~a~~~a~ 281 (311)
T COG0524 208 AALLLA------KGVKTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKSLEEALRFAN 281 (311)
T ss_pred HHHHhh------cCCCEEEEEeCCCcEEEEeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 545555 38999999999999999998543334422222238999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcCC
Q psy6977 224 WAAQHIIQVSGCTLG 238 (239)
Q Consensus 224 ~~a~~~~~~~G~~~~ 238 (239)
++|+.++++.|++.+
T Consensus 282 a~aa~~~~~~g~~~~ 296 (311)
T COG0524 282 AAAALAVTRPGARPS 296 (311)
T ss_pred HHhhhhhccCCCCCC
Confidence 999999999999864
|
|
| >cd01944 YegV_kinase_like YegV-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=232.37 Aligned_cols=217 Identities=23% Similarity=0.308 Sum_probs=168.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+++++.|++.||+++++.+.+.+|+.+++++++ +++|+++.+.+++..+++++++. ..+.+++++
T Consensus 55 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 129 (289)
T cd01944 55 AGPLGNGNWADQIRQAMRDEGIEILLPPRGGDDGGCLVALVEP-DGERSFISISGAEQDWSTEWFAT----LTVAPYDYV 129 (289)
T ss_pred EEEecCChHHHHHHHHHHHcCCccccccccCCCCeEEEEEEcC-CCceEEEEeCCccCCCCHHHhcc----ccCCCCCEE
Confidence 4789999999999999999999999988776678777677765 67888877777666666655543 236789999
Q ss_pred EEecccccc---ChHHHHHHHHHhhhCC--CCCh-hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 81 YVSGFFLTV---SPESILEVAKVALSCT--IRNI-NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 81 ~~~g~~~~~---~~~~~~~~~~~~~~~g--~~~~-p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
|++|+.+.. +.+.+.++++..+... ++|+ +. +.++++++ ++|++|+..|++.. .++....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~---~~~~~~~ 206 (289)
T cd01944 130 YLSGYTLASENASKVILLEWLEALPAGTTLVFDPGPRISDIPDTILQALMAKRPIWSCNREEAAIFAERG---DPAAEAS 206 (289)
T ss_pred EEeCccccCcchhHHHHHHHHHhccCCCEEEEcCcccccccCHHHHHHHHhcCCEEccCHHHHHHHhCCC---CcchHHH
Confidence 999876532 2455666666655333 4444 22 23555665 99999999998852 2222333
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
++.+... |++.||+|+|++|++++. ++..++.|++++ +++||+||||+|+|||++++.+|+++++|+++|
T Consensus 207 ~~~~~~~------~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~ag~l~~~~~g~~~~~a~~~a 277 (289)
T cd01944 207 ALRIYAK------TAAPVVVRLGSNGAWIRLPDGNTHIIPGFKV---KAVDTIGAGDTHAGGMLAGLAKGMSLADAVLLA 277 (289)
T ss_pred HHHHHhc------cCCeEEEEECCCcEEEEecCCCeEEecCCCC---CCccCCCchHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5556653 788999999999999998 456677887877 899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc
Q psy6977 223 VWAAQHIIQVSG 234 (239)
Q Consensus 223 ~~~a~~~~~~~G 234 (239)
+++|+.++++.|
T Consensus 278 ~a~aa~~~~~~G 289 (289)
T cd01944 278 NAAAAIVVTRSG 289 (289)
T ss_pred HHHHHhhhccCC
Confidence 999999999987
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >TIGR03828 pfkB 1-phosphofructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=236.36 Aligned_cols=224 Identities=20% Similarity=0.199 Sum_probs=176.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|+||+| +|+.+++.|++.||+++++.+.+ +|+.+++++++ +++++.+...+ ..+++++++.. ...+.+++++
T Consensus 55 is~vG~D-~g~~~~~~L~~~gId~~~~~~~~-~t~~~~~~~~~-~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~ 129 (304)
T TIGR03828 55 LGFLGGF-TGDFIEALLREEGIKTDFVRVPG-ETRINVKIKEP-SGTETKLNGPG--PEISEEELEALLEKLRAQLAEGD 129 (304)
T ss_pred EEEecCc-hhHHHHHHHHHCCCcceEEECCC-CCeeeEEEEeC-CCCEEEEECCC--CCCCHHHHHHHHHHHHHhccCCC
Confidence 5789999 69999999999999999998754 57777777775 56777665443 23444333210 1123678999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhhH---H-hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFIY---L-VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~~---~-~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++|++|+.+. ++.+.+..+++.+++.+ .+|+ +.+++.+.. + ++|++|++.+++....+.+++.++++.++
T Consensus 130 ~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~i~~~n~~E~~~l~g~~~~~~~~~~~~~~~l~ 209 (304)
T TIGR03828 130 WLVLSGSLPPGVPPDFYAELIALAREKGAKVILDTSGEALRDGLKAKPFLIKPNDEELEELFGRELKTLEEIIEAARELL 209 (304)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHHHHHHHhcCCcEECcCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 9999987653 56788889999998888 5665 444444432 3 89999999998863333345667777777
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
++ |++.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 210 ~~------g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~a~~l~~l~~g~~~~~a~~~a~~~Aa~ 280 (304)
T TIGR03828 210 DL------GAENVLISLGADGALLVTKEGALFAQPPKG---EVVSTVGAGDSMVAGFLAGLESGLSLEEALRLAVAAGSA 280 (304)
T ss_pred Hc------CCCEEEEccCCCCcEEEcCCceEEEeCCCc---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 64 889999999999999998887788888777 799999999999999999999999999999999999999
Q ss_pred HHHhccCcCC
Q psy6977 229 IIQVSGCTLG 238 (239)
Q Consensus 229 ~~~~~G~~~~ 238 (239)
++++.|++.|
T Consensus 281 ~~~~~G~~~p 290 (304)
T TIGR03828 281 AAFSEGTGLP 290 (304)
T ss_pred HhcCcCCCCC
Confidence 9999998755
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). |
| >PLN02967 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=246.71 Aligned_cols=227 Identities=14% Similarity=0.163 Sum_probs=173.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
||+||+|.+|+++++.|+++||+++++.+. +.+|+.+++.+++++..+.++..++++..+++++++. ..+.++++
T Consensus 263 Ig~VGdD~~G~~ll~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~~~~~gAd~~L~~~di~~----~~l~~A~i 338 (581)
T PLN02967 263 MGKLGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTCVKPCAEDSLSKSEINI----DVLKEAKM 338 (581)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEEEecCChhhhCChhhcCH----hHhcCCCE
Confidence 589999999999999999999999999864 5689999999987444344445678888888877764 56789999
Q ss_pred EEEeccccc--cChHHHHHHHHHhhhCC-----CCCh-hhH-----------HHHhhHH---hcCHHHHHHHHHHcCCCc
Q psy6977 80 YYVSGFFLT--VSPESILEVAKVALSCT-----IRNI-NYL-----------HHRFIYL---VLIDFEALAFAKQQNFQT 137 (239)
Q Consensus 80 ~~~~g~~~~--~~~~~~~~~~~~~~~~g-----~~~~-p~~-----------~~~~~~~---~~n~~E~~~l~~~~~~~~ 137 (239)
+|++++.+. .+...+..+++.+++.| ++|+ +.+ .++++++ ++|++|+..|++......
T Consensus 339 ~hfgg~~ll~e~~~~all~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL~~aDILk~NeeEl~~LtG~~~~~e 418 (581)
T PLN02967 339 FYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPTEE 418 (581)
T ss_pred EEEeCchhcccchHHHHHHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHHHhCCEEEECHHHHHHHhCCCcccc
Confidence 999886431 23478889999999988 5554 322 2556666 999999999987521000
Q ss_pred c------------CHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe---EEEEeccCCCCCCcccCCCCchhhh
Q psy6977 138 E------------DLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGK---TTEFPVQRLPAESVVDTNGAGDSFV 202 (239)
Q Consensus 138 ~------------~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~---~~~~~~~~~~~~~vvdt~GaGDaf~ 202 (239)
. ...+.+..+... |++.||||+|++|+++++++. ...++++++++ .+||||||||+|+
T Consensus 419 ~~~~~~~~~~~~~~~~e~a~~l~~~------g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V~V-~vVDTTGAGDAF~ 491 (581)
T PLN02967 419 FDTKDNDKSKFVHYSPEVVAPLWHE------NLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITP-FTSDMSASGDGIV 491 (581)
T ss_pred ccccccchhccccchHHHHHHHHhC------CCCEEEEEECccceEEEECCCceeEeeccCCCCCC-CCCCCCchhHHHH
Confidence 0 012334555553 889999999999999998754 33344455521 2699999999999
Q ss_pred HHHHHHHHcC-------CCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 203 GGFLSQLIKG-------EPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 203 ag~~~~l~~g-------~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
|||+++|+++ .+++++++||+++|+.+++..|++.+
T Consensus 492 AGfL~~Ll~g~~~~~g~~~LeeaLrfAnAaAAL~vt~~GA~~g 534 (581)
T PLN02967 492 AGLMRMLTVQPHLITDKGYLEKTIKYAIDCGVIDQWLLARTRG 534 (581)
T ss_pred HHHHHHHHhccCcccccccHHHHHHHHHHHHHHHhccCCCccC
Confidence 9999999973 67999999999999999999999854
|
|
| >COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=225.19 Aligned_cols=224 Identities=18% Similarity=0.196 Sum_probs=190.5
Q ss_pred CcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhcccceeE
Q psy6977 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAEY 79 (239)
Q Consensus 2 ~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~~ 79 (239)
|.+|.+ .|+.|.+.|+..||...++.+.+ +|+.++-+.+..++..+.+..++ ..+++++++.. .....+.+.|+
T Consensus 57 GflGg~-tg~~~~~~l~~~gi~~~fv~v~g-~TRinvki~~~~~~~~Tein~~G--p~is~~~~~~~l~~~~~~l~~~d~ 132 (310)
T COG1105 57 GFLGGF-TGEFFVALLKDEGIPDAFVEVKG-DTRINVKILDEEDGEETEINFPG--PEISEAELEQFLEQLKALLESDDI 132 (310)
T ss_pred EecCCc-cHHHHHHHHHhcCCCceEEEccC-CCeeeEEEEecCCCcEEEecCCC--CCCCHHHHHHHHHHHHHhcccCCE
Confidence 567876 89999999999999999999866 89998888876555566675544 67777766641 22345788999
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh---hHH-hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF---IYL-VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~---~~~-~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
++++|+.+. ++.+.+.++++.+++.| ++|. +.+.+.+ |++ +||.+|+..+++....+.+|..++++.+..
T Consensus 133 VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~~L~~~L~~~P~lIKPN~~EL~~~~g~~~~~~~d~i~~a~~l~~ 212 (310)
T COG1105 133 VVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGEALLAALEAKPWLIKPNREELEALFGRELTTLEDVIKAARELLA 212 (310)
T ss_pred EEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChHHHHHHHccCCcEEecCHHHHHHHhCCCCCChHHHHHHHHHHHH
Confidence 999999887 88999999999999999 7777 5555333 555 999999999999876667788888888777
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
. |+++|||++|.+|+++.++++.+++.+|++ ++++|+||||+++|||++++.+++++++++++|+++|+.+
T Consensus 213 ~------g~~~ViVSlG~~Gal~~~~~~~~~a~~p~~---~vvstVGAGDs~VAGf~~~~~~~~~~e~~l~~avA~g~a~ 283 (310)
T COG1105 213 E------GIENVIVSLGADGALLVTAEGVYFASPPKV---QVVSTVGAGDSMVAGFLAGLLKGKSLEEALRFAVACGAAA 283 (310)
T ss_pred C------CCCEEEEEecCcccEEEccCCeEEEeCCCc---ceecCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 999999999999999999999999998888 8999999999999999999999999999999999999999
Q ss_pred HHhccCcCC
Q psy6977 230 IQVSGCTLG 238 (239)
Q Consensus 230 ~~~~G~~~~ 238 (239)
+++.|...+
T Consensus 284 ~~~~~~~~~ 292 (310)
T COG1105 284 ASQKGTGIP 292 (310)
T ss_pred hhcCCCCCC
Confidence 998886543
|
|
| >TIGR02152 D_ribokin_bact ribokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=230.68 Aligned_cols=222 Identities=25% Similarity=0.319 Sum_probs=183.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+. +.+|+.+++++++ +++|+++.+++++..+++++++. ..+.++.+++
T Consensus 51 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 127 (293)
T TIGR02152 51 IGKVGDDAFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDD-TGENRIVVVAGANAELTPEDIDA--AEALIAESDI 127 (293)
T ss_pred EEEecCCccHHHHHHHHHHcCCCeeEEEEcCCCCCceEEEEEcC-CCCEEEEEECCcCCcCCHHHHHH--HHhhhccCCE
Confidence 478999999999999999999999999865 4589999988876 56777776666555565554432 2356789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hh----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NY----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
+++++ ..+.+.+..+++.+++.+ .+|+ +. ..++++++ ++|++|+..+++....+.++..++++.+.
T Consensus 128 ~~~~~---~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 204 (293)
T TIGR02152 128 VLLQL---EIPLETVLEAAKIAKKHGVKVILNPAPAIKDLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLL 204 (293)
T ss_pred EEEec---CCCHHHHHHHHHHHHHcCCEEEEECCcCcccchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHHHHH
Confidence 99863 456778889999998887 5666 32 24666766 99999999998864334456777888887
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
++ |++.+|||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+.+|+.
T Consensus 205 ~~------g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~---~~vdt~GAGDaf~Ag~l~~l~~g~~~~~al~~a~~~Aa~ 275 (293)
T TIGR02152 205 EK------GVKNVIITLGSKGALLVSKDESKLIPAFKV---KAVDTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAI 275 (293)
T ss_pred Hc------CCCeEEEEeCCCceEEEeCCceeEccCCCC---ceeCCCCcHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 74 899999999999999999988888888887 799999999999999999999999999999999999999
Q ss_pred HHHhccCcC
Q psy6977 229 IIQVSGCTL 237 (239)
Q Consensus 229 ~~~~~G~~~ 237 (239)
++++.|++.
T Consensus 276 ~~~~~G~~~ 284 (293)
T TIGR02152 276 SVTRKGAQS 284 (293)
T ss_pred HHcccCccc
Confidence 999999875
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. |
| >cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=228.91 Aligned_cols=218 Identities=25% Similarity=0.342 Sum_probs=173.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeech--hhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++.++. +++|+++.+. .+...++.++++ ...++++
T Consensus 51 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 125 (294)
T cd01166 51 VTAVGDDPFGRFILAELRREGVDTSHVRVDPGRPTGLYFLEIGA-GGERRVLYYRAGSAASRLTPEDLD----EAALAGA 125 (294)
T ss_pred EEecCCCHHHHHHHHHHHHcCCCCceEEEeCCCcceEEEEEecC-CCCceEEEeCCCChhHhCChhhCC----HHHHhCC
Confidence 57899999999999999999999999975 46689998888765 5677666553 344566665554 2567899
Q ss_pred eEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---hh----------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---NY----------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p~----------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++|++++.+...+ +.+.++++.+++.+ ++|+ +. +.++++++ ++|..|++.+++...
T Consensus 126 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~- 204 (294)
T cd01166 126 DHLHLSGITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLPYVDIVLPSEEEAEALLGDED- 204 (294)
T ss_pred CEEEEcCcchhhCHHHHHHHHHHHHHHHHcCCEEEECCCCcchhcChHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCC-
Confidence 99999988765433 67888999998877 4555 21 12455555 999999999987521
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCH
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~ 215 (239)
.++..+.++.+ + .|++.|+||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|.++
T Consensus 205 -~~~~~~~~~~l-~------~g~~~viit~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~a~~~~~l~~g~~~ 273 (294)
T cd01166 205 -PTDAAERALAL-A------LGVKAVVVKLGAEGALVYTGGGRVFVPAYPV---EVVDTTGAGDAFAAGFLAGLLEGWDL 273 (294)
T ss_pred -chhHHHHHHhh-c------CCccEEEEEEcCCceEEEECCceEEeCCCCc---ccccCCCchHHHHHHHHHHHHcCCCH
Confidence 12333343434 3 4899999999999999999888889988887 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccC
Q psy6977 216 SVCIECGVWAAQHIIQVSGC 235 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~ 235 (239)
++|+++|+++|+.++++.|+
T Consensus 274 ~~a~~~a~~~aa~~i~~~G~ 293 (294)
T cd01166 274 EEALRFANAAAALVVTRPGD 293 (294)
T ss_pred HHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999996
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. |
| >PLN02323 probable fructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=231.28 Aligned_cols=219 Identities=20% Similarity=0.232 Sum_probs=170.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeech--hhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+++++.|++.||+++++.+. +.+|+.+++.+++ +++|+++.+. +++..+++++++. +.++.+
T Consensus 63 i~~vG~D~~g~~i~~~L~~~GI~~~~v~~~~~~~t~~~~i~~~~-~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 137 (330)
T PLN02323 63 IGKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRS-DGEREFMFYRNPSADMLLRESELDL----DLIRKA 137 (330)
T ss_pred EEEecCChhHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECC-CCceeEEeecCCchhccCChHHCCh----HHHccC
Confidence 578999999999999999999999998864 5689898888765 5677776553 4455677776663 567889
Q ss_pred eEEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
++++++++... .+...+..+++.+++.| ++|+ +. +.++++++ ++|++|+..+++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~-- 215 (330)
T PLN02323 138 KIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGD-- 215 (330)
T ss_pred CEEEEechhccCchHHHHHHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCC--
Confidence 99988765432 12245678888888888 4444 11 12445555 99999999998752
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC-
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP- 214 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~- 214 (239)
..+..++. ++.. .|++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|++
T Consensus 216 -~~~~~~~~-~~~~------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~Agfl~~l~~g~~~ 284 (330)
T PLN02323 216 -DPDDDTVV-KLWH------PNLKLLLVTEGEEGCRYYTKDFKGRVEGFKV---KAVDTTGAGDAFVGGLLSQLAKDLSL 284 (330)
T ss_pred -CccHHHHH-HHHh------cCCCEEEEecCCCceEEEeCCCceEeCCccC---CCCCCCCcHHHHHHHHHHHHHcCCcc
Confidence 22233333 3333 3889999999999999999887778888887 8999999999999999999999986
Q ss_pred ------HHHHHHHHHHHHHHHHHhccCcC
Q psy6977 215 ------LSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 215 ------~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
+++|+++|+++|+.++++.|++.
T Consensus 285 ~~~~~~l~~al~~a~a~Aa~~v~~~g~~~ 313 (330)
T PLN02323 285 LEDEERLREALRFANACGAITTTERGAIP 313 (330)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 89999999999999999999863
|
|
| >cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=228.78 Aligned_cols=217 Identities=24% Similarity=0.290 Sum_probs=172.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCC-CCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDH-LHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~-i~~~~~~~~~~~~~ 78 (239)
+|+||+|.+|+.+++.|+++||++.++.+ .+.+|+.+++++++ +++|++....+.......+. +. .+.+++++
T Consensus 48 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~T~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 122 (295)
T cd01167 48 IGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDA-DGERSFEFYRGPAADLLLDTELN----PDLLSEAD 122 (295)
T ss_pred EEeecCcHHHHHHHHHHHHcCCCchheeecCCCCceEEEEEECC-CCCEeEEeecCCcHhhhcCccCC----hhHhccCC
Confidence 57899999999999999999999999984 56799999988875 66777776555433222211 22 25678899
Q ss_pred EEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 79 YYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 79 ~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
+++++++... ...+.+.++++.+++.| .+|+ +. +.++++++ ++|++|+..+++.
T Consensus 123 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~---- 198 (295)
T cd01167 123 ILHFGSIALASEPSRSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGE---- 198 (295)
T ss_pred EEEEechhhccchHHHHHHHHHHHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCC----
Confidence 9999765321 12356788899998877 3444 21 22455665 9999999999875
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC---
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE--- 213 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~--- 213 (239)
....+.++.+.++ |++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+
T Consensus 199 -~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~a~~~---~vvDttGAGD~f~a~~~~~l~~g~~~~ 268 (295)
T cd01167 199 -EDPEEIAALLLLF------GLKLVLVTRGADGALLYTKGGVGEVPGIPV---EVVDTTGAGDAFVAGLLAQLLSRGLLA 268 (295)
T ss_pred -CCHHHHHHHHhhc------CCCEEEEecCCcceEEEECCcceeeCCCCc---ceeeCCCccHHHHHHHHHHHHhCCccc
Confidence 4455666667664 899999999999999999888889998887 899999999999999999999999
Q ss_pred ----CHHHHHHHHHHHHHHHHHhccCc
Q psy6977 214 ----PLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 214 ----~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
++++|+++|+++|+.+++++|+.
T Consensus 269 ~~~~~~~~a~~~a~~~aa~~~~~~G~~ 295 (295)
T cd01167 269 LDEDELAEALRFANAVGALTCTKAGAI 295 (295)
T ss_pred ccHHHHHHHHHHHHHhhHHHhcccCCC
Confidence 99999999999999999999973
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. |
| >TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=230.86 Aligned_cols=226 Identities=19% Similarity=0.184 Sum_probs=171.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~ 77 (239)
+|.||+|.+|+++++.|+++||+++++.+ .+.+|+.++++++. + .+....+......++.+.... ....+.++++
T Consensus 67 i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 144 (315)
T TIGR02198 67 VGVVGDDEAGKRLEALLAEEGIDTSGLIRDKDRPTTTKTRVLAR-N-QQLLRVDFEERDPINAELEARLLAAIREQLASA 144 (315)
T ss_pred EEEEecchhHHHHHHHHHHCCCCcceEEECCCCCcceEEEEEcC-C-eEEEEecCCCCCCCCHHHHHHHHHHHHhhhhhC
Confidence 57899999999999999999999998875 45689888887764 2 222222221111222111000 1123567899
Q ss_pred eEEEEecccc-ccChHHHHHHHHHhhhCC---CCCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 78 EYYYVSGFFL-TVSPESILEVAKVALSCT---IRNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 78 ~~~~~~g~~~-~~~~~~~~~~~~~~~~~g---~~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
++++++++.. .++++.+..+++.+++.| ++|+ +..+..++++ ++|++|++.|++. ..+.++.++.++.+..
T Consensus 145 ~~v~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~d~l~~n~~E~~~l~~~-~~~~~~~~~~~~~l~~ 223 (315)
T TIGR02198 145 DAVVLSDYAKGVLTPRVVQEVIAAARKHGKPVLVDPKGKDFSRYRGATLITPNRKEAEAAVGA-CDTEAELVQAAEKLLE 223 (315)
T ss_pred CEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCcchhhcCCCcEECCCHHHHHHHhCC-CCCHHHHHHHHHHHHH
Confidence 9999988753 367788999999999888 5676 4434445544 9999999999873 2233456666666654
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
. .|++.||||+|++|++++++ ++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 224 ~-----~g~~~vivT~G~~G~~~~~~~~~~~~~~~~~~---~vvdt~GAGDaf~ag~~~~l~~g~~~~~al~~A~~~aa~ 295 (315)
T TIGR02198 224 E-----LDLEALLVTRSEKGMTLFTREGEPIHIPAQAR---EVYDVTGAGDTVIATLALALAAGASLEEACRLANAAAGV 295 (315)
T ss_pred H-----cCCCEEEEEcCCCCeEEEecCCCeEEecCCCC---CCCCCcCccHHHHHHHHHHHHcCCCHHHHHHHHHHHhhh
Confidence 3 38899999999999999884 56788888877 899999999999999999999999999999999999999
Q ss_pred HHHhccCcC
Q psy6977 229 IIQVSGCTL 237 (239)
Q Consensus 229 ~~~~~G~~~ 237 (239)
++++.|++.
T Consensus 296 ~~~~~G~~~ 304 (315)
T TIGR02198 296 VVGKLGTAT 304 (315)
T ss_pred hhccCCCCC
Confidence 999999874
|
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose. |
| >PLN02543 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=236.55 Aligned_cols=226 Identities=15% Similarity=0.156 Sum_probs=168.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEe-cCCCceeE-eechhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLIT-DNGKARSL-VANLAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~-~~~~~r~~-~~~~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
||+||+|.+|+++++.|+++|||++++.+. +.+|+.+++.++ .+++.+.+ +...+++..+.+++++. ..++++
T Consensus 192 IG~VGdD~fG~~l~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~gr~~~~~~~~gA~~~L~~~di~~----~~l~~a 267 (496)
T PLN02543 192 MGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGGKMVAETVKEAAEDSLLASELNL----AVLKEA 267 (496)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCceEEEEEEeCCCCCEEEEecCCCHHHhCChhhcCH----hHhCCC
Confidence 589999999999999999999999999975 568999988885 23554433 24456667888887764 567899
Q ss_pred eEEEEeccccccC--hHHHHHHHHHhhhCC-----CCCh-hhHH-----------HHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLTVS--PESILEVAKVALSCT-----IRNI-NYLH-----------HRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~~~--~~~~~~~~~~~~~~g-----~~~~-p~~~-----------~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++|++++.+.-+ .+.+..+++.+++.| ++|+ |.+| ++++++ ++|++|++.|++....
T Consensus 268 ~ilh~~~~~l~~~~~~~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~~aDIl~~SeeEa~~Ltg~~~~ 347 (496)
T PLN02543 268 RMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDEDYY 347 (496)
T ss_pred ceEEECChhhcCchHHHHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCcc
Confidence 9999988654222 367889999999988 4554 4433 344555 9999999999875210
Q ss_pred ------C------------------ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecc---CCCC
Q psy6977 136 ------Q------------------TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQ---RLPA 188 (239)
Q Consensus 136 ------~------------------~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~---~~~~ 188 (239)
+ ..+++.+ ..+... |++.||||+|++|+++++++....++.. .+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~------g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~~ 420 (496)
T PLN02543 348 ERKRNYPPQYYAESFEQTKNWRDYYHYTPEEI-APLWHD------GLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLITP 420 (496)
T ss_pred cccccccchhhhhhhhhhhcccccccCCHHHH-HHHHHC------CCCEEEEEcCCCcEEEEECCCcccccccccccCCC
Confidence 0 0133443 445553 8899999999999999986421122111 1111
Q ss_pred CCcccCCCCchhhhHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 189 ESVVDTNGAGDSFVGGFLSQLIK-------GEPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 189 ~~vvdt~GaGDaf~ag~~~~l~~-------g~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
.+||||||||+|+|||+++|++ +.+++++++||+++|+.++++.|++.+
T Consensus 421 -~~VDTTGAGDAF~AGfL~~Ll~~~~~~~~g~~l~ealrfAnAaaAl~vt~~GA~~~ 476 (496)
T PLN02543 421 -FTCDRTGSGDAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVAAGIISQWTIGAVRG 476 (496)
T ss_pred -CCcCCCchHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 3589999999999999999985 678999999999999999999998754
|
|
| >cd01945 ribokinase_group_B Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=225.16 Aligned_cols=213 Identities=21% Similarity=0.232 Sum_probs=168.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++.+. +.+|+.+++ ... .+++..+...+....+..++++. ..++++++
T Consensus 56 ~~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 129 (284)
T cd01945 56 IGVVGDDAIGRLILAELAAEGVDTSFIVVAPGARSPISSI-TDI-TGDRATISITAIDTQAAPDSLPD----AILGGADA 129 (284)
T ss_pred EEEecCchHHHHHHHHHHHcCCCccceeecCCCCCccEEE-Ecc-CCCceEEEecCCCCCCCcccCCH----HHhCcCCE
Confidence 578999999999999999999999999875 457877765 333 34444444445555566666653 45799999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC-----CCCh-hh--HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT-----IRNI-NY--LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g-----~~~~-p~--~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
+|++++. ++...++++.+++.| ++|+ +. +.++++++ ++|++|+..+++. .+. ++++.+.
T Consensus 130 v~i~~~~----~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~dil~~n~~e~~~l~~~-----~~~-~~~~~l~ 199 (284)
T cd01945 130 VLVDGRQ----PEAALHLAQEARARGIPIPLDLDGGGLRVLEELLPLADHAICSENFLRPNTGS-----ADD-EALELLA 199 (284)
T ss_pred EEEcCCC----HHHHHHHHHHHHHcCCCeeEeccCCcccchHHHhccCCEEEeChhHHhhhcCC-----CHH-HHHHHHH
Confidence 9998753 366778899998887 3344 21 33555555 8999999988764 222 5666666
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~ 227 (239)
+. |++.||||+|++|+++++ +++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+
T Consensus 200 ~~------~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~ag~l~~l~~g~~~~~al~~a~~~Aa 270 (284)
T cd01945 200 SL------GIPFVAVTLGEAGCLWLERDGELFHVPAFPV---EVVDTTGAGDVFHGAFAHALAEGMPLREALRFASAAAA 270 (284)
T ss_pred hc------CCcEEEEEECCCCeEEEcCCCCEEecCCCcc---ccccCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 64 899999999999999998 677888888776 89999999999999999999999999999999999999
Q ss_pred HHHHhccCcCC
Q psy6977 228 HIIQVSGCTLG 238 (239)
Q Consensus 228 ~~~~~~G~~~~ 238 (239)
.++++.|++.+
T Consensus 271 ~~~~~~G~~~~ 281 (284)
T cd01945 271 LKCRGLGGRAG 281 (284)
T ss_pred HHHhccCCccc
Confidence 99999998854
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . |
| >PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=232.15 Aligned_cols=225 Identities=27% Similarity=0.375 Sum_probs=180.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|++.||+++++.+. +.+|+++++++++ +++|+++.+.+....++++++ ....+.++++
T Consensus 56 i~~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 130 (301)
T PF00294_consen 56 IGKVGDDFFGEIILEELKERGVDTSYIPRDGDEPTGRCLIIVDP-DGERTFVFSPGANSDLTPDEL----DEEAIDEADI 130 (301)
T ss_dssp EEEEESSHHHHHHHHHHHHTTEEETTEEEESSSEEEEEEEEEET-TSEEEEEEEEGGGGGGGHHHH----HHHHHHTESE
T ss_pred EeeccCcchhhhhhhccccccccccccccccccccceeEeeecc-cccceeeeccccccccccccc----cccccccccc
Confidence 578999999999999999999999999864 5699999998886 578888877776666666444 2378889999
Q ss_pred EEEec-cccc-cChHHHHHHHHHhhhCC--CCCh--hh-------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 80 YYVSG-FFLT-VSPESILEVAKVALSCT--IRNI--NY-------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 80 ~~~~g-~~~~-~~~~~~~~~~~~~~~~g--~~~~--p~-------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
+++++ +... .+...+..+.+.+++.+ +.++ +. +.++++++ ++|++|+..+++....+.++..+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 210 (301)
T PF00294_consen 131 LHLSGVSLPEGIPEDLLEALAKAAKKNGPFDPVFRDPSWDDLREDLKELLPYADILKPNEEEAEALTGSKIDDPEDALAA 210 (301)
T ss_dssp EEEESGHCSTTSHHHHHHHHHHHHHHTTEEEEEEEGGGSHHHHHHHHHHHHTSSEEEEEHHHHHHHHTCSTSSHHHHHHH
T ss_pred eeecccccccccccceeeecccccccccccccccccccccccchhhhhhccccchhccccccccccccccccchhhhhcc
Confidence 99998 3333 45577888888888777 3333 21 22555554 999999999998732222333344
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecc-CCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQ-RLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~-~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
++.++.. |++.+++|+|++|++++++++.+++++. +. +++||+||||+|+|||++++++|+++++|+++|
T Consensus 211 ~~~l~~~------g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~---~vvdttGAGD~f~A~~i~~l~~~~~~~~a~~~a 281 (301)
T PF00294_consen 211 LRELQAR------GVKIVIVTLGEDGALYYTNDESYHVPPVPPV---NVVDTTGAGDAFAAGFIYGLLSGMSLEEALKFA 281 (301)
T ss_dssp HHHHHHT------TSSEEEEEEGGGEEEEEETTEEEEEEEESSS---SSSSCTTHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred ccccchh------hhhhhhccccccCcccccccccccccccccc---cccceeccchhhhHHHHHHHHcCCCHHHHHHHH
Confidence 4444444 8899999999999999999998888884 45 899999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCcCCC
Q psy6977 223 VWAAQHIIQVSGCTLGL 239 (239)
Q Consensus 223 ~~~a~~~~~~~G~~~~~ 239 (239)
+++|+.++++.|++.|.
T Consensus 282 ~~~aa~~v~~~g~~~~~ 298 (301)
T PF00294_consen 282 NAAAALKVQQPGPRSPL 298 (301)
T ss_dssp HHHHHHHHTSSSSSGGT
T ss_pred HHHHHHHhCCCCCcCCC
Confidence 99999999999998763
|
The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B .... |
| >cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=221.62 Aligned_cols=209 Identities=17% Similarity=0.215 Sum_probs=162.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeech-hhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANL-AAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~-~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|++|+.+++.|++.||+++++.+.+.+|+.+++.. + +++|+++.+. +......+.+. ....++++++
T Consensus 42 ~~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~-~-~g~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 115 (264)
T cd01940 42 IGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGENAVADVEL-V-DGDRIFGLSNKGGVAREHPFEA----DLEYLSQFDL 115 (264)
T ss_pred EecccCchhHHHHHHHHHHcCCChhheEEcCCCCceEEEEe-c-CCceEEEeecCCcHHhcccCcc----cHhHHhcCCE
Confidence 57899999999999999999999999987556788877543 3 5667665442 33333322211 1256789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hh-----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NY-----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKI 147 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~-----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l 147 (239)
+|++++.+ .+.+.++++.+++.| ++|+ +. +.++++++ ++|.+|.. ..+.+++++.+
T Consensus 116 v~~~~~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~d~~~~~~~~~~---------~~~~~~~~~~l 183 (264)
T cd01940 116 VHTGIYSH---EGHLEKALQALVGAGALISFDFSDRWDDDYLQLVCPYVDFAFFSASDLS---------DEEVKAKLKEA 183 (264)
T ss_pred EEEccccc---HHHHHHHHHHHHHcCCEEEEcCcccCCHHHHHhhcccCCEEEechhhcC---------cchHHHHHHHH
Confidence 99986542 567889999999888 5665 21 23555665 77866531 24456667777
Q ss_pred hcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC-HHHHHHHHHHHH
Q psy6977 148 SNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP-LSVCIECGVWAA 226 (239)
Q Consensus 148 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~-~~~a~~~a~~~a 226 (239)
.++ |++.||+|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|++ +++|+++|+++|
T Consensus 184 ~~~------~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGDaf~ag~i~~l~~g~~~~~~al~~a~~~a 254 (264)
T cd01940 184 VSR------GAKLVIVTRGEDGAIAYDGAVFYSVAPRPV---EVVDTLGAGDSFIAGFLLSLLAGGTAIAEAMRQGAQFA 254 (264)
T ss_pred HHc------CCCEEEEEECCCCeEEEeCCeEEecCCcCC---CCCCCCCchHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 664 889999999999999999888888888877 8999999999999999999999999 999999999999
Q ss_pred HHHHHhccCc
Q psy6977 227 QHIIQVSGCT 236 (239)
Q Consensus 227 ~~~~~~~G~~ 236 (239)
+.++++.|+.
T Consensus 255 a~~~~~~G~~ 264 (264)
T cd01940 255 AKTCGHEGAF 264 (264)
T ss_pred HHHhcccCCC
Confidence 9999999974
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. |
| >PRK09434 aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=223.53 Aligned_cols=217 Identities=19% Similarity=0.298 Sum_probs=170.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeec--hhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVAN--LAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~--~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+++++.|+++||+++++.. .+.+|+.+++.+++ +++|++... .++...++.++++ .+.+.
T Consensus 48 v~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~i~~~~-~g~r~~~~~~~~~~~~~~~~~~~~------~~~~~ 120 (304)
T PRK09434 48 IGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTSTVVVDLDD-QGERSFTFMVRPSADLFLQPQDLP------PFRQG 120 (304)
T ss_pred EEEecCchHHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECC-CCCEeEEEecCCchhhhCCHHHhh------hhcCC
Confidence 57899999999999999999999999875 46689888887765 567765432 2333334443332 35679
Q ss_pred eEEEEeccccccC--hHHHHHHHHHhhhCC---CCCh---hhH-----------HHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLTVS--PESILEVAKVALSCT---IRNI---NYL-----------HHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~~~--~~~~~~~~~~~~~~g---~~~~---p~~-----------~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
++++++++....+ .....++++.+++.| .+|+ +.. .++++++ ++|++|+..+++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g~--- 197 (304)
T PRK09434 121 EWLHLCSIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSGT--- 197 (304)
T ss_pred CEEEEccccccCchHHHHHHHHHHHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhCC---
Confidence 9999987654322 245678888888887 3443 221 1445555 9999999999875
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC--
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE-- 213 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~-- 213 (239)
++.+++++.+.+. .|++.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+
T Consensus 198 --~~~~~~~~~l~~~-----~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGD~f~ag~~~~l~~g~~~ 267 (304)
T PRK09434 198 --SQLEDAIYALADR-----YPIALLLVTLGAEGVLVHTRGQVQHFPAPSV---DPVDTTGAGDAFVAGLLAGLSQAGLW 267 (304)
T ss_pred --CCHHHHHHHHHhh-----cCCcEEEEEecCCceEEEeCCceeEeCCCCC---CCCcCCCchHHHHHHHHHHHHcCCCc
Confidence 5678888888763 2789999999999999999888889988887 899999999999999999999996
Q ss_pred ----CHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 214 ----PLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 214 ----~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
++++|+++|+++|+.++++.|++.
T Consensus 268 ~~~~~~~~a~~~a~~~Aa~~v~~~g~~~ 295 (304)
T PRK09434 268 TDEAELAEIIAQAQACGALATTAKGAMT 295 (304)
T ss_pred cchHHHHHHHHHHHHHHHHHHcccCCcC
Confidence 899999999999999999999763
|
|
| >cd01943 MAK32 MAK32 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=228.85 Aligned_cols=224 Identities=14% Similarity=0.128 Sum_probs=169.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
++.+|+| +|+++++.|+++||++++ .+ .+.+|+.+++++++ +++|.++...+.+..+++++++. ..+..+++
T Consensus 51 ~~~vG~D-~G~~l~~~L~~~GVd~~~-~~~~~~~Tg~~~v~~~~-~g~r~~~~~~~~~~~~~~~~l~~----~~~~~a~~ 123 (328)
T cd01943 51 IVDKGSD-FPKSVEDELESWGTGMVF-RRDPGRLTTRGLNIYDG-NDRRFFKYLTPKKRIDVSDDLNS----TPLIRSSC 123 (328)
T ss_pred EEecCCC-CCHHHHHHHHhcCCceEE-EeCCCCcchhhhhhcCC-CCcceeeecCccccccccccccc----ccccCCCe
Confidence 4678999 999999999999999999 54 46689988877765 77787777667777888887764 45778999
Q ss_pred EEEeccccccChHHHHHHHHHhhh------CC---CCCh-hh---------HHHHhhHH---hcCHHHHHHHHHHcCCCc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALS------CT---IRNI-NY---------LHHRFIYL---VLIDFEALAFAKQQNFQT 137 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~------~g---~~~~-p~---------~~~~~~~~---~~n~~E~~~l~~~~~~~~ 137 (239)
+|+++.... ..+....+++.+++ .+ .+|+ |. +.++++++ ++|++|+..|++....+.
T Consensus 124 ~hl~~~~~~-~~~~~~~~~~~a~~~~~d~~~g~~~~~d~~~~~~~~~~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~~~~ 202 (328)
T cd01943 124 IHLICSPER-CASIVDDIINLFKLLKGNSPTRPKIVWEPLPDSCDPENLEDLLQALPRVDVFSPNLEEAARLLGLPTSEP 202 (328)
T ss_pred EEEECCHHH-HHHHHHHHHHHHHhhccccCCccEEEEecCCcccChhhHHHHHHHhccCCEECCCHHHHHHHhCCCCCCc
Confidence 999765321 12677888888887 45 3444 32 22566665 999999999998633222
Q ss_pred cCHHHHH-----HHHhcCCCCCCCCceEEEEeeCCCcEEEEE--CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHH
Q psy6977 138 EDLHAIA-----LKISNLPKQNPNRERITIITQGDKPIILSQ--NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLI 210 (239)
Q Consensus 138 ~~~~~~~-----~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~--~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~ 210 (239)
...+... ..+..... .|++.||||+|++|+++++ +++.+++|++++++.+++||+||||+|+|||+++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~---~g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~ 279 (328)
T cd01943 203 SSDEEKEAVLQALLFSGILQ---DPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLA 279 (328)
T ss_pred cchhhhhhhHHHHHHHhhhc---cCCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHH
Confidence 2122211 11211111 3889999999999999988 456778877765334799999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhccC
Q psy6977 211 KGEPLSVCIECGVWAAQHIIQVSGC 235 (239)
Q Consensus 211 ~g~~~~~a~~~a~~~a~~~~~~~G~ 235 (239)
+|+++++|+++|+++|+.++++.|.
T Consensus 280 ~g~~~~~al~~a~a~Aa~~v~~~G~ 304 (328)
T cd01943 280 LTKSIDEACIYGSVAASFAIEQVGL 304 (328)
T ss_pred cCCCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999995
|
MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply. |
| >TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=226.10 Aligned_cols=224 Identities=17% Similarity=0.199 Sum_probs=175.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|.||+| +|+.+++.|++.||+++++...+ +|++++++.++ ++.++.+...+ ..+++++++.. ...+.+++++
T Consensus 55 i~~vG~D-~g~~i~~~l~~~gI~~~~i~~~~-~t~~~~~~~~~-~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 129 (303)
T TIGR03168 55 TGFLGGF-TGEFIEALLAEEGIKNDFVEVKG-ETRINVKIKES-SGEETELNEPG--PEISEEELEQLLEKLRELLASGD 129 (303)
T ss_pred EEEeCCc-hhHHHHHHHHHcCCCceEEECCC-CCEEeEEEEeC-CCCEEEEeCcC--CCCCHHHHHHHHHHHHHhccCCC
Confidence 4789998 79999999999999999998753 56677776664 55666554433 33554443321 1124578999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh-HH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI-YL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~-~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++|++++... ++.+.+..+++.+++.| .+|+ +.+++.+. ++ ++|++|+..+++....+.++..++++.+.
T Consensus 130 ~v~i~~~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~ 209 (303)
T TIGR03168 130 IVVISGSLPPGVPPDFYAQLIAIARKRGAKVILDTSGEALREALAAKPFLIKPNHEELEELFGRELKTEEEIIEAARELL 209 (303)
T ss_pred EEEEeCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcHHHHHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 9999886543 66788889999998888 6666 33443332 22 89999999998864333345667777777
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|+|++++++|+++++|+++|+++|+.
T Consensus 210 ~~------g~~~vviT~g~~G~~~~~~~~~~~~~~~~~---~~vDttGAGD~F~a~~~~~l~~g~~i~~a~~~A~~~aa~ 280 (303)
T TIGR03168 210 DR------GAENVLVSLGADGALLVTKEGALKATPPKV---EVVNTVGAGDSMVAGFLAGLARGLSLEEALRFAVAAGSA 280 (303)
T ss_pred Hc------CCCEEEEeecCCCcEEEeCCceEEeeCCcc---eeecCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 74 889999999999999999888888888887 799999999999999999999999999999999999999
Q ss_pred HHHhccCcCC
Q psy6977 229 IIQVSGCTLG 238 (239)
Q Consensus 229 ~~~~~G~~~~ 238 (239)
++++.|+++|
T Consensus 281 ~~~~~G~~~~ 290 (303)
T TIGR03168 281 AAFSPGTGLP 290 (303)
T ss_pred HhcCCCcCCC
Confidence 9999999754
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. |
| >PRK10294 6-phosphofructokinase 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=226.21 Aligned_cols=226 Identities=17% Similarity=0.145 Sum_probs=172.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc-hhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP-ENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~ 79 (239)
++.+|+ ++|+.+++.|++.||+++++.+.+..+...++.+++ +++++++...+. .++.++++.. .....++++++
T Consensus 58 i~~vG~-~~g~~i~~~l~~~gv~~~~~~~~~~~~~~~~i~~~~-~g~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~ 133 (309)
T PRK10294 58 IFPAGG-ATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEA-SGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAI 133 (309)
T ss_pred EEEecC-ccHHHHHHHHHHcCCCceEEECCCCCeeeEEEEEcC-CCcEEEEECCCC--CCCHHHHHHHHHHHHhcCCCCE
Confidence 467896 799999999999999999998755444334445554 556776665442 3444433321 11124678999
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh--hHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF--IYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~--~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++++|+.+. .+.+.+.++++.+++.| ++|+ ..+...+ +++ ++|++|+..|++....+.++++++++.++
T Consensus 134 ~~i~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~i~~n~~E~~~l~g~~~~~~~~~~~a~~~l~ 213 (309)
T PRK10294 134 LVISGSLPPGVKLEKLTQLISAAQKQGIRCIIDSSGDALSAALAIGNIELVKPNQKELSALVNRDLTQPDDVRKAAQELV 213 (309)
T ss_pred EEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCHHHHHHHhcCCCeEECCCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 999987653 55678899999999888 5676 3333322 223 99999999998864333445667777777
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
+. .+++.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 214 ~~-----~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~ag~l~~l~~g~~~~~al~~a~a~aa~ 285 (309)
T PRK10294 214 NS-----GKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSA 285 (309)
T ss_pred Hc-----CCCCEEEEecCCCceEEEcCCccEEEeCCCc---ccCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 64 1378999999999999998887778888877 899999999999999999999999999999999999999
Q ss_pred HHHhccCcCC
Q psy6977 229 IIQVSGCTLG 238 (239)
Q Consensus 229 ~~~~~G~~~~ 238 (239)
++++.|++++
T Consensus 286 ~v~~~G~~~~ 295 (309)
T PRK10294 286 ATLNQGTRLC 295 (309)
T ss_pred HhcCCCCCCC
Confidence 9999999864
|
|
| >KOG2855|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=218.35 Aligned_cols=223 Identities=21% Similarity=0.259 Sum_probs=163.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
||+||+|.||+++.+.|++++|+++++... +.+|+...+.+.. +|++.++.+.+++....++..+ ...+.++.+++
T Consensus 66 iGkvGdD~fG~~l~~~L~~~~V~~~~v~~~~~~~T~~a~i~v~~-dG~~~~~~v~gan~~~~~~~se--~~~~~i~~ak~ 142 (330)
T KOG2855|consen 66 IGKVGDDEFGDDLLDILKQNGVDTSGVKFDENARTACATITVSK-DGENRIIFVRGANADMLPEDSE--LNLEVIKEAKV 142 (330)
T ss_pred eecccchhhHHHHHHHHhhCCcccccceecCCCceEEEEEEEcc-CCceEEEEEecCchhcCccccc--ccHHHHhhccE
Confidence 689999999999999999999999999964 6699999988875 6666666667777666665432 23488999999
Q ss_pred EEEeccccccChHHHHHH-----HHHhhhCC--CCCh-hhHHHHhhHHhcCHHHHHHHHHHcCCCccCHHHHHH------
Q psy6977 80 YYVSGFFLTVSPESILEV-----AKVALSCT--IRNI-NYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIAL------ 145 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~-----~~~~~~~g--~~~~-p~~~~~~~~~~~n~~E~~~l~~~~~~~~~~~~~~~~------ 145 (239)
+++.+ +++.+..... ++.+++.| +.+. +..+++.+...+|+.|++.+++..+.-.-+-+++..
T Consensus 143 ~~~q~---ei~~~~~~~s~~~~~~~~~~~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~~~ 219 (330)
T KOG2855|consen 143 FHCQS---EILIEEPMRSLHIAAVKVAKNAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGIED 219 (330)
T ss_pred EEEee---ecCCcchhHHHHHhhhhhhhcccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccCcc
Confidence 99954 4333322222 33555555 2222 222234444467777776666653322222222221
Q ss_pred ----HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEE-EEeccCCCCCCcccCCCCchhhhHHHHHHHHcC--CC---H
Q psy6977 146 ----KISNLPKQNPNRERITIITQGDKPIILSQNGKTT-EFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG--EP---L 215 (239)
Q Consensus 146 ----~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~-~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g--~~---~ 215 (239)
+|.. .+.|.||||+|++|+.|++++..- ++++..+ ++||||||||+|+|||+.+|.+| .+ +
T Consensus 220 ~~~~~L~~------~~~k~viVTlG~kG~~y~tk~~~~~~v~~~~V---~~VDtTGAGDsFvgal~~~L~~~~~~~~~~L 290 (330)
T KOG2855|consen 220 DKILKLWH------MKLKLVIVTLGEKGCRYYTKDFKGSHVPAFKV---KAVDTTGAGDSFVGALAVQLVRGSLLPELSL 290 (330)
T ss_pred chHHHHhc------cCCCEEEEEeCCCceEEEecCCCCCCCCCccc---ccccCCCchHHHHHHHHHHHhhccccchHHH
Confidence 2333 266999999999999999986544 8888888 79999999999999999999999 66 9
Q ss_pred HHHHHHHHHHHHHHHHhccCcCC
Q psy6977 216 SVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
++++++|++|++.+++++|++++
T Consensus 291 ~~~l~~A~a~~ai~v~~~Ga~~s 313 (330)
T KOG2855|consen 291 EEALRFANACGAITVQRKGAIPS 313 (330)
T ss_pred HHHHHHHHHhhhHHhhccCCCcc
Confidence 99999999999999999999875
|
|
| >PRK09850 pseudouridine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=228.46 Aligned_cols=223 Identities=17% Similarity=0.208 Sum_probs=169.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeec-hhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVAN-LAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+|.+|+.+++.|++.||+++++.+ .+.+|+.+++++++ +++|.+..+ +++...++++.++. ..+.+++++
T Consensus 60 ig~vG~D~~g~~i~~~l~~~gVd~~~~~~~~~~~T~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 136 (313)
T PRK09850 60 LSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDN-TGEMLVAINDMNISNAITAEYLAQ--HREFIQRAK 136 (313)
T ss_pred EEEecCchhHHHHHHHHHHcCCCchheeecCCCCceEEEEEecC-CCCEEEEecCchHhhhCCHHHHHH--HHHHHhcCC
Confidence 57899999999999999999999998765 55679999998886 566665443 33344444333321 124578999
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC-CCCh-hh-----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT-IRNI-NY-----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g-~~~~-p~-----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++++++ .++.+.+..+++.++... ++|+ +. +.++++++ ++|++|+..|++....+.++++++++++.
T Consensus 137 ~v~~~~---~~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~ 213 (313)
T PRK09850 137 VIVADC---NISEEALAWILDNAANVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFH 213 (313)
T ss_pred EEEEeC---CCCHHHHHHHHHhccCCCEEEEcCCHHHHHHHHhhhccceEEccCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 999865 345666667766543111 5665 22 23555555 99999999998853333456777878777
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~ 227 (239)
+. |++.||||+|++|++++++ ++..++|++++ ++|||+||||+|+|||++++++|+++++|+++|+++|+
T Consensus 214 ~~------g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~agfi~~l~~g~~~~eal~~a~a~aa 284 (313)
T PRK09850 214 QH------GLNRLVLSMGGDGVYYSDISGESGWSAPIKT---NVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSS 284 (313)
T ss_pred Hc------CCCEEEEEeCCceEEEEcCCCCeEecCCCCc---ccccCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 64 8899999999999999975 44566777776 89999999999999999999999999999999999999
Q ss_pred HHHHhccCcCC
Q psy6977 228 HIIQVSGCTLG 238 (239)
Q Consensus 228 ~~~~~~G~~~~ 238 (239)
.++++.++..+
T Consensus 285 ~~~~~~~~~~~ 295 (313)
T PRK09850 285 MALSCEYTNNP 295 (313)
T ss_pred HHhcCCCCCCc
Confidence 99999887643
|
|
| >cd01942 ribokinase_group_A Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=219.32 Aligned_cols=207 Identities=23% Similarity=0.289 Sum_probs=162.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.. .+.+|+.+++++++ +++|+++.++++...+++++ . ...++++++
T Consensus 56 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~ 129 (279)
T cd01942 56 VAAVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDG-DDNQIAYFYPGAMDELEPND-E----ADPDGLADI 129 (279)
T ss_pred EEEecCCcchHHHHHHHHHcCCCccceEEcCCCCcceEEEEEcC-CCCEEEEecCCcccccccCC-c----hhhhcccCE
Confidence 57899999999999999999999999964 56689998888875 67777776666666665544 2 256789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
+++++.. .+.++++.+++.| .+|+ +. +.++++++ ++|++|+..|..... ..+...
T Consensus 130 ~~~~~~~------~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~--~~~~~~-- 199 (279)
T cd01942 130 VHLSSGP------GLIELARELAAGGITVSFDPGQELPRLSGEELEEILERADILFVNDYEAELLKERTG--LSEAEL-- 199 (279)
T ss_pred EEeCCch------HHHHHHHHHHHcCCeEEEcchhhhhhccHHHHHHHHhhCCEEecCHHHHHHHHhhcC--CChHHH--
Confidence 9997652 4567777777767 5665 21 23556665 999999954432211 111111
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecc-CCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQ-RLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~-~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
. .|++.||+|+|++|++++++++.+++|++ ++ +++||+||||+|+|||++++++|+++++|+++|+
T Consensus 200 ----~------~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~a~~i~~l~~g~~l~~al~~a~ 266 (279)
T cd01942 200 ----A------SGVRVVVVTLGPKGAIVFEDGEEVEVPAVPAV---KVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGN 266 (279)
T ss_pred ----h------cCCCEEEEEECCCceEEEECCceEEccCcCcC---CCcCCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 1 27899999999999999998888888876 66 8999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCc
Q psy6977 224 WAAQHIIQVSGCT 236 (239)
Q Consensus 224 ~~a~~~~~~~G~~ 236 (239)
++|+.+++++|++
T Consensus 267 ~~Aa~~~~~~G~~ 279 (279)
T cd01942 267 LAASLKVERRGAQ 279 (279)
T ss_pred HHHHHHHcccCCC
Confidence 9999999999985
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=221.79 Aligned_cols=221 Identities=19% Similarity=0.191 Sum_probs=171.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|+||+| +|+.+++.|++.||+++++... .+|+...++.+. +++++.+...+ ..+++++++.. ...+.+++++
T Consensus 56 is~vG~D-~g~~i~~~l~~~gi~~~~~~~~-~~t~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 130 (289)
T cd01164 56 LGFLGGF-TGDFFEALLKEEGIPDDFVEVA-GETRINVKIKEE-DGTETEINEPG--PEISEEELEALLEKLKALLKKGD 130 (289)
T ss_pred EEEccCc-hhHHHHHHHHHcCCCceEEECC-CCCEEEEEEEeC-CCCEEEEeCCC--CCCCHHHHHHHHHHHHHhcCCCC
Confidence 4789998 8999999999999999998864 357777777665 35566554333 23444333210 1124567899
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh-hHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF-IYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~-~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++|++|..+. .+.+.+..+++.+++.+ .+|+ ..+++.+ +++ ++|++|+..+++....+.++..++++.++
T Consensus 131 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 210 (289)
T cd01164 131 IVVLSGSLPPGVPADFYAELVRLAREKGARVILDTSGEALLAALAAKPFLIKPNREELEELFGRPLGDEEDVIAAARKLI 210 (289)
T ss_pred EEEEeCCCCCCcCHHHHHHHHHHHHHcCCeEEEECChHHHHHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 9999887653 44578888999888877 4565 2333444 344 89999999999864334456777777787
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
+. |++.|++|+|++|++++.+++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 211 ~~------g~~~vivt~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~a~~i~~l~~g~~~~~a~~~A~~~Aa~ 281 (289)
T cd01164 211 ER------GAENVLVSLGADGALLVTKDGVYRASPPKV---KVVSTVGAGDSMVAGFVAGLAQGLSLEEALRLAVAAGSA 281 (289)
T ss_pred Hc------CCCEEEEecCCCCCEEEcCCcEEEecCCCc---cccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 74 889999999999999998888888888877 799999999999999999999999999999999999999
Q ss_pred HHHhccC
Q psy6977 229 IIQVSGC 235 (239)
Q Consensus 229 ~~~~~G~ 235 (239)
++++.|+
T Consensus 282 ~~~~~G~ 288 (289)
T cd01164 282 TAFSPGT 288 (289)
T ss_pred HhcCccC
Confidence 9999986
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. |
| >PRK13508 tagatose-6-phosphate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=223.45 Aligned_cols=221 Identities=12% Similarity=0.126 Sum_probs=166.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~~ 78 (239)
+|.||+ .+|+++++.|++ ||+++++...+ +|+.+.++++ +++|+++...++ .++.++... ....+.+++++
T Consensus 56 ~~~vGd-~~G~~i~~~l~~-gI~~~~~~~~~-~t~~~~~~~~--~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 128 (309)
T PRK13508 56 TGLIGG-ELGQFIAEHLDD-QIKHAFYKIKG-ETRNCIAILH--EGQQTEILEKGP--EISVQEADGFLHHFKQLLESVE 128 (309)
T ss_pred EEEecC-hhHHHHHHHHHc-CCCceEEECCC-CCeeeEEEEe--CCCEEEEECCCC--CCCHHHHHHHHHHHHHhccCCC
Confidence 478995 789999999999 99999877643 6777777665 567777765543 232222111 11235678999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh---hHH---hcCHHHHHHHHHHcCC-CccCHHHHHH
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF---IYL---VLIDFEALAFAKQQNF-QTEDLHAIAL 145 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~---~~~---~~n~~E~~~l~~~~~~-~~~~~~~~~~ 145 (239)
++|++|+.+. .+.+.+..+++.+++.| .+|+ ....+++ ... ++|++|+..+++.... +.++..++++
T Consensus 129 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~ 208 (309)
T PRK13508 129 VVAISGSLPAGLPVDYYAQLIELANQAGKPVVLDCSGAALQAVLESPYKPTVIKPNIEELSQLLGKEVSEDLDELKEVLQ 208 (309)
T ss_pred EEEEeCCCCCCcCHHHHHHHHHHHHHCCCEEEEECCcHHHHHHHhccCCceEEccCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 9999987654 34577888999999888 5666 2223332 222 9999999999875211 1123444444
Q ss_pred HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 146 ~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
.+.. .|++.|++|+|++|++++++++.++.+++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 209 ~~~~------~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~Agfi~~l~~g~~~~~al~~a~a~ 279 (309)
T PRK13508 209 QPLF------EGIEWIIVSLGADGAFAKHNDTFYKVDIPKI---EVVNPVGSGDSTVAGIASGLLHQEDDADLLKKANVL 279 (309)
T ss_pred HHHH------cCCCEEEEecCCCceEEEeCCceEEEeCCCc---cccCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5544 3899999999999999998888888888888 899999999999999999999999999999999999
Q ss_pred HHHHHHhccCcC
Q psy6977 226 AQHIIQVSGCTL 237 (239)
Q Consensus 226 a~~~~~~~G~~~ 237 (239)
|++++++.++..
T Consensus 280 aa~~~~~~~~~~ 291 (309)
T PRK13508 280 GMLNAQEKQTGH 291 (309)
T ss_pred HHHHhcCcCcCC
Confidence 999999888653
|
|
| >PRK09513 fruK 1-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=222.78 Aligned_cols=224 Identities=20% Similarity=0.154 Sum_probs=171.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|.||+|.+|+. ++.|+++||++.++...+ +|+.++.+++. +++++.+...+ ..+++.+.+.. .....+++++
T Consensus 59 i~~vG~D~~~~~-~~~l~~~gv~~~~~~~~~-~t~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~d 133 (312)
T PRK09513 59 GGFLGKDNQDGF-QQLFSELGIANRFQVVQG-RTRINVKLTEK-DGEVTDFNFSG--FEVTPADWERFVTDSLSWLGQFD 133 (312)
T ss_pred EEEecCccHHHH-HHHHHHcCCCccEEECCC-CCEEEEEEEeC-CCcEEEEeCCC--CCCCHHHHHHHHHHHHhhcCCCC
Confidence 478999999986 689999999998875544 78877777665 56776655433 22333222210 1124678999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh---HH-hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI---YL-VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~---~~-~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++|++|+.+. .+.+.+.++++.+++.| ++|+ +.+++.+. ++ ++|++|+..+++....+.+++.++++.+.
T Consensus 134 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~~~~~~l~ 213 (312)
T PRK09513 134 MVAVSGSLPRGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPELKDVIEAAHALR 213 (312)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHHHHHHhccCCeEEcCCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 9999997654 45578888899998877 5666 44443332 22 89999999999864333345666777777
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
++ |++.||+|+|++|++++++++.++.+++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 214 ~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGDaf~ag~i~~l~~g~~~~~a~~~A~a~Aa~ 284 (312)
T PRK09513 214 EQ------GIAHVVISLGAEGALWVNASGEWIAKPPAC---DVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVSAL 284 (312)
T ss_pred Hc------CCCEEEEEeCCCCcEEEeCCceEEecCCCc---cccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 74 899999999999999988877777887776 799999999999999999999999999999999999999
Q ss_pred HHHhccCcCC
Q psy6977 229 IIQVSGCTLG 238 (239)
Q Consensus 229 ~~~~~G~~~~ 238 (239)
++++.|..++
T Consensus 285 ~~~~~~~~~~ 294 (312)
T PRK09513 285 AVSQSNVGIT 294 (312)
T ss_pred HhhCCCCCCC
Confidence 9999886543
|
|
| >PRK09954 putative kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=227.72 Aligned_cols=221 Identities=16% Similarity=0.170 Sum_probs=162.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeec-hhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVAN-LAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+++++.|+++||+++++.+ ++.+|+.++++.++ ++.+.+... +.....++++.++. ..+.+..++
T Consensus 113 ig~VG~D~~G~~i~~~l~~~GVd~~~~~~~~~~~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 189 (362)
T PRK09954 113 LSAIGDDFYGETLLEETRRAGVNVSGCIRLHGQSTSTYLAIANR-QDETVLAINDTHILQQLTPQLLNG--SRDLIRHAG 189 (362)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCccceEEcCCCCCeEEEEEEcC-CCCEEEEEcCchhhhcCCHHHHHH--HHHHHhcCC
Confidence 57899999999999999999999998886 45578887776654 444433322 12234444433331 124567889
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC-CCCh-hh-----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT-IRNI-NY-----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g-~~~~-p~-----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++++++ ..+.+.+..+++.++... .+|+ +. +.++++++ ++|++|++.+++....+.++.+++++.++
T Consensus 190 ~v~~~~---~~~~~~~~~~~~~a~~~~v~~D~~~~~~~~~~~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~ 266 (362)
T PRK09954 190 VVLADC---NLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPTQPELEILWGQAITSDADRNAAVNALH 266 (362)
T ss_pred EEEEEC---CCCHHHHHHHHHhCCCCcEEEECCCHHHhhhhhhhhccccEEecCHHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 998854 345666666666654212 5666 32 23555555 99999999998753323345667777787
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECC-eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNG-KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~-~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~ 227 (239)
+. |++.||||+|++|+++++.+ +.++++++++ ++||||||||+|+|||++++++|+++++|+++|+++|+
T Consensus 267 ~~------g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~Ag~l~~l~~g~~~~eal~~a~a~Aa 337 (362)
T PRK09954 267 QQ------GVQQIFVYLPDESVFCSEKDGEQFLLTAPAH---TTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAMACAA 337 (362)
T ss_pred Hc------CCCEEEEEeCCccEEEEeCCCceEeccCCCc---ccccccchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 74 89999999999999988754 4667777777 89999999999999999999999999999999999999
Q ss_pred HHHHhccCc
Q psy6977 228 HIIQVSGCT 236 (239)
Q Consensus 228 ~~~~~~G~~ 236 (239)
.++.+..+.
T Consensus 338 l~~~s~~~~ 346 (362)
T PRK09954 338 ISRASGSLN 346 (362)
T ss_pred HHhcCCCcC
Confidence 997655444
|
|
| >cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=214.65 Aligned_cols=199 Identities=21% Similarity=0.271 Sum_probs=157.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+.+++.|++ ++++.++...+.+|+.+++++++ +++|+++...... +++++. ..+++++++
T Consensus 56 i~~vG~D~~g~~i~~~l~~-~~~~~~~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~----~~~~~~----~~~~~~~~~ 125 (265)
T cd01947 56 FSNLGRDEIGIQSLEELES-GGDKHTVAWRDKPTRKTLSFIDP-NGERTITVPGERL----EDDLKW----PILDEGDGV 125 (265)
T ss_pred EEEecCChHHHHHHHHHHh-cCCcceEEecCCCCceEEEEECC-CCcceEEecCCCC----cccCCH----hHhccCCEE
Confidence 5789999999999999999 99999887666689998888875 6677776543321 223332 467899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC--CCCh---h---hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT--IRNI---N---YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g--~~~~---p---~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
|+++... ..++++.+++.+ +++. + .+.++++++ ++|++|+..+++ .+.+.+
T Consensus 126 ~~~~~~~------~~~~~~~a~~~~~~~~d~~~~~~~~~~~~~~~~~d~~~~n~~e~~~l~~------------~~~~~~ 187 (265)
T cd01947 126 FITAAAV------DKEAIRKCRETKLVILQVTPRVRVDELNQALIPLDILIGSRLDPGELVV------------AEKIAG 187 (265)
T ss_pred EEecccc------cHHHHHHHHHhCCeEeccCccccchhHHHHhhhCCEEEeCHHHHHHhhh------------HHHHHh
Confidence 9987531 235566666656 4444 2 223556665 999999987753 233444
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
. |++.||+|+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 188 ~------~~~~viit~G~~Ga~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~~~Aa~~ 258 (265)
T cd01947 188 P------FPRYLIVTEGELGAILYPGGRYNHVPAKKA---KVPDSTGAGDSFAAGFIYGLLKGWSIEEALELGAQCGAIC 258 (265)
T ss_pred c------cCCEEEEEeCCCCeEEEECCeeEECCCCCC---CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 3 889999999999999999888888888877 8999999999999999999999999999999999999999
Q ss_pred HHhccCc
Q psy6977 230 IQVSGCT 236 (239)
Q Consensus 230 ~~~~G~~ 236 (239)
+++.|+.
T Consensus 259 v~~~G~~ 265 (265)
T cd01947 259 VSHFGPY 265 (265)
T ss_pred HhccCCC
Confidence 9999974
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-32 Score=219.47 Aligned_cols=214 Identities=16% Similarity=0.128 Sum_probs=157.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|++|+.+++.|+++||+++++.+. +..+..+++++++ +++|+++...++...++.++++. ..++++++
T Consensus 56 ~~~vG~D~~g~~~~~~l~~~gId~~~~~~~~~~~~~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 130 (290)
T cd01939 56 LGVLSRGPVFESLLDDFQSRGIDISHCYRKDIDEPASSYIIRSR-AGGRTTIVNDNNLPEVTYDDFSK----IDLTQYGW 130 (290)
T ss_pred EEeecCCHHHHHHHHHHHHcCCceeeeeEcCCCCCeeEEEEEcC-CCCeEEEEeCCCCCCCCHHHHhh----hhhccCCE
Confidence 578999999999999999999999998654 3344445655554 56677766666555565555442 33589999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC----------CCCh----hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT----------IRNI----NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHA 142 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g----------~~~~----p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~ 142 (239)
+|++++.+ +...++++.+++.+ ++|+ +.+.++++++ ++|++|+..+ +. .+.++
T Consensus 131 ~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~l~~~di~~~n~~~~~~~-~~-----~~~~~ 200 (290)
T cd01939 131 IHFEGRNP----DETLRMMQHIEEHNNRRPEIRITISVEVEKPREELLELAAYCDVVFVSKDWAQSR-GY-----KSPEE 200 (290)
T ss_pred EEEeccCH----HHHHHHHHHHHHhcCcCCCcceEEEEEeccCchhhhhHHhhCCEEEEEhHHHHhc-Cc-----CCHHH
Confidence 99988654 33445555555432 2333 3355777775 8999887654 43 34455
Q ss_pred HHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC-HHHHHH
Q psy6977 143 IALKISNLPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP-LSVCIE 220 (239)
Q Consensus 143 ~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~-~~~a~~ 220 (239)
++..+..+. +|++.||+|+|++|++++.+ ++.+++|+++. .++|||+||||+|+|||+|++++|++ +++|++
T Consensus 201 ~~~~~~~~~----~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~~vvDt~GAGDsf~agfl~~l~~g~~~~~~a~~ 274 (290)
T cd01939 201 CLRGEGPRA----KKAALLVCTWGDQGAGALGPDGEYVHSPAHKP--IRVVDTLGAGDTFNAAVIYALNKGPDDLSEALD 274 (290)
T ss_pred HHHhhhhhc----cCCcEEEEEcccCCeEEEcCCCCEEEecCCCC--CCcccCCCchHHHHHHHHHHHHcCCccHHHHHH
Confidence 444332221 37899999999999998876 55677787653 26999999999999999999999995 999999
Q ss_pred HHHHHHHHHHHhccC
Q psy6977 221 CGVWAAQHIIQVSGC 235 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~ 235 (239)
+|+++|+.++++.|.
T Consensus 275 ~a~a~aa~~i~~~G~ 289 (290)
T cd01939 275 FGNRVASQKCTGVGF 289 (290)
T ss_pred HHHHHHHHHHhhhcC
Confidence 999999999999985
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. |
| >TIGR01231 lacC tagatose-6-phosphate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=221.21 Aligned_cols=221 Identities=13% Similarity=0.115 Sum_probs=165.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~~ 78 (239)
+|.+|+ .+|+++++.|++.||+++++...+ +|+.+..++. +++|+++..+++. +..+.... ......+++++
T Consensus 55 i~~vG~-~~G~~i~~~l~~~GV~~~~~~~~~-~t~~~~~~~~--~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 128 (309)
T TIGR01231 55 SGFLGG-KLGEFIEKELDHSDIKHAFYKISG-ETRNCIAILH--EGQQTEILEQGPE--ISNQEAAGFLKHFEQLLEKVE 128 (309)
T ss_pred EEEecC-hhHHHHHHHHHHcCCceeEEECCC-CCEEeEEEEe--CCCEEEEeCCCCC--CCHHHHHHHHHHHHHHhccCC
Confidence 478996 499999999999999999988643 5767666664 4677777665532 21111000 11235678999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh---hHH---hcCHHHHHHHHHHcCC-CccCHHHHHH
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF---IYL---VLIDFEALAFAKQQNF-QTEDLHAIAL 145 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~---~~~---~~n~~E~~~l~~~~~~-~~~~~~~~~~ 145 (239)
++|++|+.+. .+...+..+++.+++.| ++|+ +.++.++ +++ ++|.+|+..+++.... +.++..+.++
T Consensus 129 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~ 208 (309)
T TIGR01231 129 VVAISGSLPKGLPQDYYAQIIERCQNKGVPVVLDCSGATLQTVLENPAKPTVIKPNIEELSQLLNQELTEDLESLKQALS 208 (309)
T ss_pred EEEEECCCCCCcCHHHHHHHHHHHHhCCCeEEEECChHHHHHHHhccCCCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 9999997654 45678889999999888 5665 2233222 233 9999999999875211 1122333444
Q ss_pred HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 146 ~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
.+.. .|++.|++|+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 209 ~~~~------~g~~~vivT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~agfl~~l~~g~~~~~a~~~a~a~ 279 (309)
T TIGR01231 209 QPLF------SGIEWIIVSLGAQGAFAKHGHTFYKVNIPTI---SVVNPVGSGDSTVAGITSALLNHESDHDLLKKANTL 279 (309)
T ss_pred HHHH------cCCCEEEEccCCCceEEEeCCeeEEeeCCcc---CcCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4444 3889999999999999998888888888888 899999999999999999999999999999999999
Q ss_pred HHHHHHhccCc
Q psy6977 226 AQHIIQVSGCT 236 (239)
Q Consensus 226 a~~~~~~~G~~ 236 (239)
|+.++++.++.
T Consensus 280 aa~~~~~~~~~ 290 (309)
T TIGR01231 280 GMLNAQEAQTG 290 (309)
T ss_pred HHHHhcCcccC
Confidence 99999887754
|
This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation. |
| >cd01941 YeiC_kinase_like YeiC-like sugar kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=217.34 Aligned_cols=216 Identities=23% Similarity=0.271 Sum_probs=165.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEe-echhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLV-ANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~-~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|++|+.+++.|++.||+++++...+.+|+.++++++. +++|++. ..+.....++++.++ ...+.+.++++
T Consensus 55 ~~~lG~D~~g~~i~~~L~~~gI~~~~~~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~ 131 (288)
T cd01941 55 LSAVGDDSEGESILEESEKAGLNVRGIVFEGRSTASYTAILDK-DGDLVVALADMDIYELLTPDFLR--KIREALKEAKP 131 (288)
T ss_pred EEEEecCccHHHHHHHHHHcCCccceeeeCCCCcceEEEEECC-CCCEEEEEechHhhhhCCHHHHH--HHHHHHhcCCE
Confidence 4789999999999999999999999987556789998888876 6666653 333333334332221 22356889999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh---hhHHH---HhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI---NYLHH---RFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKI 147 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p~~~~---~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l 147 (239)
+++++ ..+++.+..+++.+++.+ .+|+ +.+++ +++++ ++|++|+..+++....+......+++.+
T Consensus 132 v~~~~---~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~~~~~~~ 208 (288)
T cd01941 132 IVVDA---NLPEEALEYLLALAAKHGVPVAFEPTSAPKLKKLFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKIL 208 (288)
T ss_pred EEEeC---CCCHHHHHHHHHhhhhcCCcEEEEccchHHhccchhhcccceEEeCCHHHHHHHhCcccCCchhHHHHHHHH
Confidence 99864 345677888888888877 4444 33333 55655 9999999999886332223334455666
Q ss_pred hcCCCCCCCCceEEEEeeCCCcEEEEEC---CeEEEEec-cCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 148 SNLPKQNPNRERITIITQGDKPIILSQN---GKTTEFPV-QRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 148 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~---~~~~~~~~-~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
... |++.||+|+|++|++++++ +..+++|+ +++ +++||+||||+|.|||++++++|+++++|+++|+
T Consensus 209 ~~~------~~~~vvit~G~~Ga~~~~~~~~~~~~~~~~~~~~---~~vDttGAGDaf~a~~~~~l~~g~~~~~al~~a~ 279 (288)
T cd01941 209 LLP------GIKNVIVTLGAKGVLLSSREGGVETKLFPAPQPE---TVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQ 279 (288)
T ss_pred HHc------CCcEEEEEeCCCcEEEEecCCCceeEEecCCCCc---cceeCCCcHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 653 8999999999999999987 55678887 355 8999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q psy6977 224 WAAQHIIQ 231 (239)
Q Consensus 224 ~~a~~~~~ 231 (239)
++|+.+++
T Consensus 280 ~~Aa~~~~ 287 (288)
T cd01941 280 AAAALTLE 287 (288)
T ss_pred HHHHHHhc
Confidence 99999986
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >PRK09813 fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=212.39 Aligned_cols=204 Identities=20% Similarity=0.215 Sum_probs=154.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeech-hhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANL-AAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~-~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+++++.|+++||+++++.+.+.+|+.+++.++ +++|++..+. +....+..+. ...+.+.++++
T Consensus 43 is~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~--~~~r~~~~~~~~~~~~~~~~~----~~~~~l~~~~~ 116 (260)
T PRK09813 43 ITWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELH--DNDRVFGDYTEGVMADFALSE----EDYAWLAQYDI 116 (260)
T ss_pred EEEecCcHHHHHHHHHHHHcCCcchheeeecCCCceEEEEEe--CCcEEeeccCCCcccccccCH----HHHHHHHhCCE
Confidence 578999999999999999999999999876567888877775 5677665432 3223322221 12255788999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h-----hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N-----YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKI 147 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p-----~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l 147 (239)
++++.+. ...++++.++++| ++|+ + .+.++++++ +.|.++ ...+++++++.+
T Consensus 117 v~~~~~~------~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~d~~~~~~~~----------~~~~~~~~~~~~ 180 (260)
T PRK09813 117 VHAAIWG------HAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHLDYAFASAPQ----------EDEFLRLKMKAI 180 (260)
T ss_pred EEEeccc------hHHHHHHHHHHcCCeEEEEcCCCccHHHHHHhCCceeEEEecCCc----------chHHHHHHHHHH
Confidence 9995321 1245677777777 4555 1 223455554 444332 113455677777
Q ss_pred hcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy6977 148 SNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227 (239)
Q Consensus 148 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~ 227 (239)
.+. |++.++||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+
T Consensus 181 ~~~------g~~~viit~G~~Ga~~~~~~~~~~~~~~~~---~~vDttGAGDaF~ag~i~~~~~g~~~~~al~~a~~~aa 251 (260)
T PRK09813 181 VAR------GAGVVIVTLGENGSIAWDGAQFWRQAPEPV---TVVDTMGAGDSFIAGFLCGWLAGMTLPQAMAQGTACAA 251 (260)
T ss_pred HHc------CCCEEEEEECCCceEEEECCEEEecCCccc---CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 664 889999999999999999988889888887 79999999999999999999999999999999999999
Q ss_pred HHHHhccC
Q psy6977 228 HIIQVSGC 235 (239)
Q Consensus 228 ~~~~~~G~ 235 (239)
.++++.|+
T Consensus 252 ~~~~~~G~ 259 (260)
T PRK09813 252 KTIQYHGA 259 (260)
T ss_pred HHHhccCC
Confidence 99999986
|
|
| >PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-30 Score=220.45 Aligned_cols=225 Identities=17% Similarity=0.166 Sum_probs=164.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechh-hhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLA-AANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~-~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+++++.|+++||+++++.+.+.+|+.++++++. ++. ....+.. ....++++.+. ......++++++
T Consensus 70 i~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~T~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~ 146 (473)
T PRK11316 70 VGLTGIDEAARALSKLLAAVGVKCDFVSVPTHPTITKLRVLSR-NQQ-LIRLDFEEGFEGVDPQPLL-ERIEQALPSIGA 146 (473)
T ss_pred EEEEcCCHHHHHHHHHHHHcCCceeEEEcCCCCCCeeEEEEeC-Cce-EEecccccCCCchhHHHHH-HHHHHHhccCCE
Confidence 5789999999999999999999999988766789888888763 332 2221111 11111111111 112356789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCCC
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLPK 152 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~ 152 (239)
++++++.... .+.+..+++.+++.| ++|+ +.....++.+ ++|.+|+..+++.. .+.++..+.++++...
T Consensus 147 v~is~~~~~~-~~~~~~~~~~~k~~g~~vv~Dp~~~~~~~~~~~dil~pN~~Ea~~l~g~~-~~~~~~~~~~~~l~~~-- 222 (473)
T PRK11316 147 LVLSDYAKGA-LASVQAMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKC-KDEAELVEKGMKLIAD-- 222 (473)
T ss_pred EEEecCCccc-hhHHHHHHHHHHhcCCeEEEeCCCCCccccCCCeEECcCHHHHHHHhCCC-CCHHHHHHHHHHHHHh--
Confidence 9998764322 256778888888887 5666 2222223333 99999999998741 1223334445555432
Q ss_pred CCCCCceEEEEeeCCCcEEEEECCe-EEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 153 QNPNRERITIITQGDKPIILSQNGK-TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 153 ~~~~g~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
.|++.|+||+|++|++++++++ .+++|++++ +++||+||||+|.|||++++++|+++++|+++|+++|+.+++
T Consensus 223 ---~g~~~vvVT~G~~G~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~aa~~~~l~~g~~~~~al~~A~a~Aa~~v~ 296 (473)
T PRK11316 223 ---YDLSALLVTRSEQGMTLLQPGKAPLHLPTQAR---EVYDVTGAGDTVISVLAAALAAGNSLEEACALANAAAGVVVG 296 (473)
T ss_pred ---cCCCEEEEEecCCCcEEEecCCceEEecCcCC---CCCCCCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhcc
Confidence 3889999999999999888765 578888877 899999999999999999999999999999999999999999
Q ss_pred hccCcCC
Q psy6977 232 VSGCTLG 238 (239)
Q Consensus 232 ~~G~~~~ 238 (239)
+.|+..+
T Consensus 297 ~~G~~~~ 303 (473)
T PRK11316 297 KLGTSTV 303 (473)
T ss_pred cCCCccC
Confidence 9998643
|
|
| >cd01946 ribokinase_group_C Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-28 Score=194.34 Aligned_cols=209 Identities=23% Similarity=0.302 Sum_probs=154.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecC----CCceeEeechhhhhccCCCCCCCchhhhccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDN----GKARSLVANLAAANLFTPDHLHVPENNKLIQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~----~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~ 75 (239)
+|.||+| +|+.+++.|+++||+++++.+. +.+|.. ..... +..++..........+.+ .+ .+.+.
T Consensus 44 i~~vG~D-~g~~~~~~l~~~gi~~~~v~~~~~~~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~ 113 (277)
T cd01946 44 VGVVGED-FPEEDYKLLNSHNIVTLGLLSKEDGKTFH---WAGRYHYDLNEADTLDTDLNVFADFDP-QL-----PEHYK 113 (277)
T ss_pred EEeccCc-ChHHHHHHHHhccCcceeEEEecCCCeEE---EeeEehhhcccccchhhhhhHHhhcCC-CC-----hHHhh
Confidence 5889999 8999999999999999999864 445521 11110 111121111111122222 12 25578
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC--CCCh-hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT--IRNI-NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLH 141 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g--~~~~-p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~ 141 (239)
+++++|+++. +++....+++.+++.. .+|+ +. +.++++++ ++|++|+..|++. +++.
T Consensus 114 ~~~~v~~~~~----~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~-----~~~~ 184 (277)
T cd01946 114 DSEFVFLGNI----APELQREVLEQVKDPKLVVMDTMNFWISIKPEKLKKVLAKVDVVIINDGEARQLTGA-----ANLV 184 (277)
T ss_pred cCCEEEECCC----CHHHHHHHHHHHHhCCEEEEccHHHhhhhhHHHHHHHhccCCEEeCCHHHHHHHhCC-----chHH
Confidence 8999999653 4566777788777545 5564 22 23555655 9999999999864 5677
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC-----CCHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG-----EPLS 216 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g-----~~~~ 216 (239)
++++.+.++ |++.||+|+|.+|++++++++.+++|++++ .+++||+||||+|.|||++++.++ .+++
T Consensus 185 ~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~~vDttGAGDaF~Agfl~~l~~~~~~~~~~~~ 256 (277)
T cd01946 185 KAARLILAM------GPKALIIKRGEYGALLFTDDGYFAAPAYPL--ESVFDPTGAGDTFAGGFIGYLASQKDTSEANMR 256 (277)
T ss_pred HHHHHHHHc------CCCEEEEecCCCcEEEEECCceEEcCCccc--CccCCCCCchHHHHHHHHHHHHhCCCcchhhHH
Confidence 888888874 899999999999999998888888887776 248999999999999999999987 4699
Q ss_pred HHHHHHHHHHHHHHHhccCc
Q psy6977 217 VCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 217 ~a~~~a~~~a~~~~~~~G~~ 236 (239)
+|+++|+++|+.++++.|+.
T Consensus 257 ~a~~~a~~~aa~~~~~~G~~ 276 (277)
T cd01946 257 RAIIYGSAMASFCVEDFGTK 276 (277)
T ss_pred HHHHHhHHHHhhhhhhcCCC
Confidence 99999999999999999975
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >PLN02630 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-26 Score=186.95 Aligned_cols=195 Identities=18% Similarity=0.232 Sum_probs=152.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecC----CCceeEeechhhhhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDN----GKARSLVANLAAANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~----~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~ 76 (239)
||+||+|.. .+|+...+...+.+|+.+.+++++. ++++.++...+++..+++++++. ..++.
T Consensus 57 is~VG~D~~----------~~v~~~~~~~~~~~T~~~~~~~~~g~~~~~~e~~i~~~~ga~~~l~~~di~~----~~~~~ 122 (335)
T PLN02630 57 VSKVGPDFL----------YQVSHPPIVIPDSKTTEFHADFDQGIDGNGHEDRVLKRVCACDPIEPSDIPD----MRYEF 122 (335)
T ss_pred EEEecCCcc----------ccccccceecCCCCceEEEEEEcCCcccCCCCeEEEEeccccCCCChHHCCH----HHhcc
Confidence 578999952 3677665555566898888877653 45777888889999999988874 24677
Q ss_pred eeEEEEeccccccChHHHHHHHHHhhh-----CC---CCCh-hh-----------HHHHhhHH---hcCHHHHHHHHHHc
Q psy6977 77 AEYYYVSGFFLTVSPESILEVAKVALS-----CT---IRNI-NY-----------LHHRFIYL---VLIDFEALAFAKQQ 133 (239)
Q Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~g---~~~~-p~-----------~~~~~~~~---~~n~~E~~~l~~~~ 133 (239)
++++++.+ +++++....+++.++. +| .+|+ +. +.++++++ ++|++|+..+
T Consensus 123 ~~~~~l~~---ei~~e~~~~~~~~a~~v~~D~~g~~~~~Dp~~~~~~~~~~~~~~~~~~L~~iDil~~ne~Ea~~l---- 195 (335)
T PLN02630 123 GMAVGVAG---EILPETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVKLEETGFYDMLPRIGFLKASSEEALFI---- 195 (335)
T ss_pred cceeeecC---CCcHHHHHHHHHHhhhheeccCceEEecCCcccccccchhhHHHHHHHHHhCCEEEecHHHHhhc----
Confidence 78888843 4557888889998887 56 5566 32 22556666 9999999765
Q ss_pred CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC
Q psy6977 134 NFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213 (239)
Q Consensus 134 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~ 213 (239)
+.+++ .+ .+.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|.
T Consensus 196 -----~~~~~----~~--------~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vDttGAGDaF~agfi~~l~~g~ 255 (335)
T PLN02630 196 -----DVEEV----RQ--------KCCVIVTNGKKGCRIYWKDGEMRVPPFPA---IQVDPTGAGDSFLGGFVAGLVQGL 255 (335)
T ss_pred -----CHHHH----cc--------CCEEEEEECCCceEEEECCeeEEeCCCCC---CCCCCCChHHHHHHHHHHHHHcCC
Confidence 22222 22 13899999999999999888888888887 799999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhccCc
Q psy6977 214 PLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 214 ~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
++++|+++|+++|+.++++.|..
T Consensus 256 ~~~~a~~~A~a~aa~~v~~~G~~ 278 (335)
T PLN02630 256 AVPDAALLGNYFGSLAVEQVGIP 278 (335)
T ss_pred CHHHHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999999999953
|
|
| >cd01937 ribokinase_group_D Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-26 Score=181.20 Aligned_cols=197 Identities=20% Similarity=0.151 Sum_probs=144.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+ ++.|++.||++..+. ..+|+.+++.++. +++|.++.+.+....... . ...+.+++++
T Consensus 44 i~~vG~D~~g~--~~~l~~~gv~~~~~~--~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~ 111 (254)
T cd01937 44 VTKVGRDYPDK--WSDLFDNGIEVISLL--STETTTFELNYTN-EGRTRTLLAKCAAIPDTE--S-----PLSTITAEIV 111 (254)
T ss_pred EEeeCCCchHH--HHHHHHCCcEEEEec--CCCeEEEEEEecC-CCCeeeeeccccCCcccc--c-----ccccCcccEE
Confidence 57899999999 788999999975443 3356666666664 456666555443322211 1 1346789999
Q ss_pred EEeccccccChHHHHHHHHHhhhCCCCCh-hh----------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCTIRNI-NY----------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~-p~----------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
|+++. +++....+.+.+. .-.+|+ +. +.++++++ ++|++|+..+ .+.+++++.
T Consensus 112 ~~~~~----~~~~~~~~~~~~~-~v~~D~~~~~~~~~~~~~~~~~~l~~~di~~~n~~E~~~~--------~~~~~~~~~ 178 (254)
T cd01937 112 ILGPV----PEEISPSLFRKFA-FISLDAQGFLRRANQEKLIKCVILKLHDVLKLSRVEAEVI--------STPTELARL 178 (254)
T ss_pred EECCC----cchhcHHHHhhhh-heeEccccceeeccccchHHHhhcccCcEEEEcHHHHhhc--------CCHHHHHHH
Confidence 99754 2333334443331 113333 11 12555665 8999998772 467778888
Q ss_pred HhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHH
Q psy6977 147 ISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226 (239)
Q Consensus 147 l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a 226 (239)
+.++ |++.||+|+|++|++++++++.++++++++ +++||+||||+|+|||++++.+|+++++|+++|+++|
T Consensus 179 l~~~------g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~a 249 (254)
T cd01937 179 IKET------GVKEIIVTDGEEGGYIFDGNGKYTIPASKK---DVVDPTGAGDVFLAAFLYSRLSGKDIKEAAEFAAAAA 249 (254)
T ss_pred HHHc------CCCEEEEeeCCcceEEEECCccEEccccCc---eeccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7774 899999999999999999888888888877 7999999999999999999999999999999999999
Q ss_pred HHHHH
Q psy6977 227 QHIIQ 231 (239)
Q Consensus 227 ~~~~~ 231 (239)
+.+++
T Consensus 250 a~~i~ 254 (254)
T cd01937 250 AKFIE 254 (254)
T ss_pred HHHhC
Confidence 99864
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >KOG2947|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-23 Score=154.77 Aligned_cols=218 Identities=15% Similarity=0.164 Sum_probs=160.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.+....--+++++.|++.|||+++....+..++.+.++++.+.+.|++++.....+.++-+++.. --+.+..|+
T Consensus 61 ~Gvlsr~~~f~~lLddl~~rgIdishcpftd~~pp~ssiI~~r~s~trTil~~dks~p~vT~~dF~k----vdl~qy~Wi 136 (308)
T KOG2947|consen 61 FGVLSRGHVFRFLLDDLRRRGIDISHCPFTDHSPPFSSIIINRNSGTRTILYCDKSLPDVTATDFEK----VDLTQYGWI 136 (308)
T ss_pred eeecccchhHHHHHHHHHhcCCCcccCccccCCCCcceEEEecCCCceEEEEecCCCccccHHHhhh----cccceeeeE
Confidence 3566777788999999999999999998777777788999999899999998887778777777653 456799999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC-----------CCCh----hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT-----------IRNI----NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHA 142 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g-----------~~~~----p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~ 142 (239)
||.+. ++....+|++...+++ .+++ +.+.+++.+. +.+++=++.+ ...++++
T Consensus 137 hfE~R----np~etlkM~~~I~~~N~r~pe~qrI~vSvd~en~req~~~l~am~DyVf~sK~~a~~~------gfks~re 206 (308)
T KOG2947|consen 137 HFEAR----NPSETLKMLQRIDAHNTRQPEEQRIRVSVDVENPREQLFQLFAMCDYVFVSKDVAKHL------GFKSPRE 206 (308)
T ss_pred EEecC----ChHHHHHHHHHHHHhhcCCCccceEEEEEEecCcHHHHHHHhhcccEEEEEHHHHhhh------ccCCHHH
Confidence 99543 3334445555555554 2233 3333444333 5665544443 2356777
Q ss_pred HHHHHhcCCCCCCCCceEEEEeeCCCcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHH-HHcCCCHHHHHH
Q psy6977 143 IALKISNLPKQNPNRERITIITQGDKPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQ-LIKGEPLSVCIE 220 (239)
Q Consensus 143 ~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~-l~~g~~~~~a~~ 220 (239)
+.+.+..+..-+. ..+.+|+.++++|+-... +++.+++++.+-| ++||+.|+||+|.|||+|+ +.++.++.||++
T Consensus 207 a~~~l~~r~~~~~-pkpv~I~~w~~eGA~~l~adg~yfev~a~~pp--kvVD~lg~~DtF~A~vIyA~lk~~r~l~eAvd 283 (308)
T KOG2947|consen 207 ACEGLYGRVPKGK-PKPVLICPWASEGAGALGADGKYFEVDAFKPP--KVVDTLGAGDTFNAGVIYALLKQGRSLAEAVD 283 (308)
T ss_pred HHHHHHhhcccCC-CCcEEEeccccccccccCCCCCEEecCCCCCc--cceeeccCCCcchHHHHHHHHHhhhhHHHHHH
Confidence 7766655544111 124577889999987664 4677787777643 9999999999999999999 567999999999
Q ss_pred HHHHHHHHHHHhccC
Q psy6977 221 CGVWAAQHIIQVSGC 235 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~ 235 (239)
||+++|+.+++-.|-
T Consensus 284 fg~rvas~Kl~g~Gf 298 (308)
T KOG2947|consen 284 FGNRVASKKLGGQGF 298 (308)
T ss_pred HHHHhhhcccccccc
Confidence 999999999988773
|
|
| >COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-23 Score=166.73 Aligned_cols=222 Identities=18% Similarity=0.194 Sum_probs=170.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~~ 78 (239)
+|.+|+|+.|+.+.+.|...+|+..++....++|.....++.. .++.+..+.. ..+..+.... ..+...+.+.+
T Consensus 70 ~GvvG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~Rv~s~--nQQllRvD~E--e~~~~~~~~~ll~~~~~~l~~~~ 145 (467)
T COG2870 70 VGVVGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKLRVLSR--NQQLLRLDFE--EKFPIEDENKLLEKIKNALKSFD 145 (467)
T ss_pred EEeeccchhHHHHHHHHHhcCcccceEeecCCCceeeeeeecc--cceEEEeccc--ccCcchhHHHHHHHHHHHhhcCC
Confidence 5889999999999999999999988888778899888888864 3333322221 1111111111 23447788999
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC---CCCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCC
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT---IRNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLP 151 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~ 151 (239)
.+++|.|.-..-.+ +..+++.+++.| .+|+ +.--+.+..+ .||..|++...|... +.+++.+...+|.+.+
T Consensus 146 ~vVLSDY~KG~L~~-~q~~I~~ar~~~~pVLvDPKg~Df~~Y~GAtLiTPN~~E~~~~vg~~~-~e~el~~~g~kL~~~~ 223 (467)
T COG2870 146 ALVLSDYAKGVLTN-VQKMIDLAREAGIPVLVDPKGKDFEKYRGATLITPNLKEFEEAVGKCK-SEEELEERGQKLKEEL 223 (467)
T ss_pred EEEEeccccccchh-HHHHHHHHHHcCCcEEECCCCcchhhhCCCeecCCCHHHHHHHHcccc-cHHHHHHHHHHHHHhh
Confidence 99999987663222 788999999998 5666 3222233333 899999999998743 2344666667777764
Q ss_pred CCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 152 KQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 152 ~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+...+++|++++|+.+++.++..|+|+... +|-|.|||||+-+|.|..+++.|.++++|+.+|++||+..+.
T Consensus 224 -----~L~alLvTRsE~GMtL~~~~~~~h~pt~Ak---EVyDVTGAGDTVIa~la~~laaG~s~~eAc~lAN~AagiVVg 295 (467)
T COG2870 224 -----DLSALLVTRSEKGMTLFQEGKPLHFPARAK---EVYDVTGAGDTVIAVLAAALAAGASLEEACELANAAAGIVVG 295 (467)
T ss_pred -----CcceEEEEeccCCceeecCCcccccchhhe---eeeeccCCCchHHHHHHHHHHcCCCHHHHHHHhhhhcceEEe
Confidence 678999999999999999888888888775 899999999999999999999999999999999999999999
Q ss_pred hccCc
Q psy6977 232 VSGCT 236 (239)
Q Consensus 232 ~~G~~ 236 (239)
..|+.
T Consensus 296 KlGTa 300 (467)
T COG2870 296 KLGTA 300 (467)
T ss_pred eccce
Confidence 99874
|
|
| >PRK05756 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=135.29 Aligned_cols=149 Identities=17% Similarity=0.199 Sum_probs=113.2
Q ss_pred ccceeEEEEeccccc-cChHHHHHHHHHhhhCC-----CCCh---h-------------hHH-HHhhHH---hcCHHHHH
Q psy6977 74 IQNAEYYYVSGFFLT-VSPESILEVAKVALSCT-----IRNI---N-------------YLH-HRFIYL---VLIDFEAL 127 (239)
Q Consensus 74 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g-----~~~~---p-------------~~~-~~~~~~---~~n~~E~~ 127 (239)
+...+++ ++|+.+. ...+.+.++++.+++.+ ++|+ + .+. ++++++ +||..|++
T Consensus 72 l~~~~~v-~~G~l~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea~ 150 (286)
T PRK05756 72 LGECDAV-LSGYLGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFELE 150 (286)
T ss_pred cccCCEE-EECCCCCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHHH
Confidence 4577855 6687665 33467888888877654 3343 2 111 355555 99999999
Q ss_pred HHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC--------cEEEEECCeEEEEeccCCCCCCc-ccCCCCc
Q psy6977 128 AFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK--------PIILSQNGKTTEFPVQRLPAESV-VDTNGAG 198 (239)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~--------G~~~~~~~~~~~~~~~~~~~~~v-vdt~GaG 198 (239)
.|++....+.++..+++++++++ |++.|+||.|.. |++++++++.++.+.+++ ++ +|++|||
T Consensus 151 ~L~g~~~~~~~~~~~~~~~l~~~------g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~v~~~GaG 221 (286)
T PRK05756 151 WLSGRPVETLEDAVAAARALIAR------GPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLV---DFMRQPVGVG 221 (286)
T ss_pred HHhCCCcCCHHHHHHHHHHHHHh------CCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCcc---CCCCCCCChH
Confidence 99986433345566777778774 899999999876 477777777777777776 56 7999999
Q ss_pred hhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 199 DSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 199 Daf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
|+|+|+|++++++|+++++|+++|++.....+..
T Consensus 222 D~f~a~~~a~l~~g~~~~~al~~A~~~~~~~i~~ 255 (286)
T PRK05756 222 DLTSALFLARLLQGGSLEEALEHTTAAVYEVMAR 255 (286)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988877765
|
|
| >cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.5e-17 Score=131.78 Aligned_cols=148 Identities=16% Similarity=0.211 Sum_probs=113.1
Q ss_pred cceeEEEEeccccc-cChHHHHHHHHHhhhC--C---CCCh---h-------------hHHHHhh-HH---hcCHHHHHH
Q psy6977 75 QNAEYYYVSGFFLT-VSPESILEVAKVALSC--T---IRNI---N-------------YLHHRFI-YL---VLIDFEALA 128 (239)
Q Consensus 75 ~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--g---~~~~---p-------------~~~~~~~-~~---~~n~~E~~~ 128 (239)
..++++ ++|+.+. ...+.+.++++.+++. + ++|+ + .+.+++. ++ ++|.+|+..
T Consensus 71 ~~~~~v-~~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~~ 149 (254)
T cd01173 71 LEYDAV-LTGYLGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELEL 149 (254)
T ss_pred ccCCEE-EEecCCCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHHH
Confidence 456777 5677554 3457788888888875 5 3443 1 1124444 54 999999999
Q ss_pred HHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC------cEEEEECCeEEEEeccCCCCCC-cccCCCCchhh
Q psy6977 129 FAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK------PIILSQNGKTTEFPVQRLPAES-VVDTNGAGDSF 201 (239)
Q Consensus 129 l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~------G~~~~~~~~~~~~~~~~~~~~~-vvdt~GaGDaf 201 (239)
|++....+.++.+++++++.++ |++.|++|.|.. |++++++++.++++.+.+ + ++|++||||+|
T Consensus 150 l~g~~~~~~~~~~~~~~~l~~~------g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~GaGD~f 220 (254)
T cd01173 150 LTGKKINDLEDAKAAARALHAK------GPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKI---PFPAYFNGTGDLF 220 (254)
T ss_pred HcCCCcCCHHHHHHHHHHHHHh------CCCEEEEEeeccCCCCcEEEEEEecCccEEEEeecc---CCCCCcCChHHHH
Confidence 9987443445677888888874 899999999985 788887776666777776 4 69999999999
Q ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 202 VGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 202 ~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
+|||++++++|+++++|+++|++.-...+..
T Consensus 221 ~a~~~~~l~~g~~~~~a~~~A~~~~~~~i~~ 251 (254)
T cd01173 221 AALLLARLLKGKSLAEALEKALNFVHEVLEA 251 (254)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988776653
|
Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria. |
| >cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=128.12 Aligned_cols=123 Identities=24% Similarity=0.349 Sum_probs=95.8
Q ss_pred eeEEEEeccccccChHHHHHHHHHhhhCC---CCCh---hh------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHH
Q psy6977 77 AEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI---NY------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLH 141 (239)
Q Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p~------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~ 141 (239)
+++++++++.+. .+.+.++++.+++.+ ++|+ +. +.++++++ ++|.+|++.+++....+.++..
T Consensus 58 ~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~ 135 (196)
T cd00287 58 ADAVVISGLSPA--PEAVLDALEEARRRGVPVVLDPGPRAVRLDGEELEKLLPGVDILTPNEEEAEALTGRRDLEVKEAA 135 (196)
T ss_pred ccEEEEecccCc--HHHHHHHHHHHHHcCCeEEEeCCccccccccchHHHHHhhCCEECCCHHHHHHHhCCCCCChHHHH
Confidence 899999876543 367888899998877 5555 11 12456665 9999999999886433333445
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLI 210 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~ 210 (239)
+.++.+.+. |++.||+|+|++|+++++ ++..+++++++. +++||+||||+|+|||+++++
T Consensus 136 ~~~~~l~~~------g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 136 EAAALLLSK------GPKVVIVTLGEKGAIVATRGGTEVHVPAFPV---KVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred HHHHHHHhc------CCCEEEEEECCCccEEEecCCceEEcCCccC---CcccCCCchHHHHHHHHHHhC
Confidence 667777764 889999999999999998 777778887766 799999999999999999874
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). |
| >TIGR00687 pyridox_kin pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.2e-17 Score=132.58 Aligned_cols=148 Identities=14% Similarity=0.165 Sum_probs=108.8
Q ss_pred cccceeEEEEeccccc-cChHHHHHHHHHhhhCC-----CCCh------------hhHH-----HHhhHH---hcCHHHH
Q psy6977 73 LIQNAEYYYVSGFFLT-VSPESILEVAKVALSCT-----IRNI------------NYLH-----HRFIYL---VLIDFEA 126 (239)
Q Consensus 73 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g-----~~~~------------p~~~-----~~~~~~---~~n~~E~ 126 (239)
.+.++|++ ++|+.+. ...+.+.++++.+++.+ ++|+ +.+. ++++++ ++|..|+
T Consensus 71 ~~~~~d~v-~~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~~~~~~~~~~~ll~~adii~pN~~Ea 149 (286)
T TIGR00687 71 KLNQCDAV-LSGYLGSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVAPDLLEVYREKAIPVADIITPNQFEL 149 (286)
T ss_pred ccccCCEE-EECCCCCHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeChhHHHHHHHhccccccEecCCHHHH
Confidence 44678886 6687664 33467888888887654 2344 1111 344555 9999999
Q ss_pred HHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEe-eCCCcE--------EEEECCeEEEEeccCCCCCC-cccCCC
Q psy6977 127 LAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT-QGDKPI--------ILSQNGKTTEFPVQRLPAES-VVDTNG 196 (239)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt-~G~~G~--------~~~~~~~~~~~~~~~~~~~~-vvdt~G 196 (239)
..|++....+.++..++++.++++ |++.||+| .|.+|+ +++++++.++.+.+++ + ++|++|
T Consensus 150 ~~L~g~~~~~~~~~~~~~~~l~~~------g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~G 220 (286)
T TIGR00687 150 ELLTGRKINTVEEALAAADALIAM------GPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLA---VFMRQPVG 220 (286)
T ss_pred HHHhCCCcCCHHHHHHHHHHHHHh------CCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccCc---CCCCCCCC
Confidence 999986433445566777888774 89999999 688775 4456566666766665 5 689999
Q ss_pred CchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q psy6977 197 AGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 197 aGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~ 230 (239)
|||+|+|+|++++++|.++++|+++|+++....+
T Consensus 221 aGD~f~A~~l~~l~~g~~~~~al~~A~~~v~~~l 254 (286)
T TIGR00687 221 TGDLIAALLLATLLHGNSLKEALEKTVSAVYHVL 254 (286)
T ss_pred hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999844333
|
ThiD and related proteins form an outgroup. |
| >PRK12412 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=128.95 Aligned_cols=145 Identities=19% Similarity=0.192 Sum_probs=111.3
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh-h-----------hH-----HHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI-N-----------YL-----HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~-p-----------~~-----~~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+. -+.+.+..+++.+++.+ ++|+ . .. .++++++ +||..|++.|++
T Consensus 72 ~~~~iki-G~l--~~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~g 148 (268)
T PRK12412 72 GVDALKT-GML--GSVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLFEAYQLSG 148 (268)
T ss_pred CCCEEEE-CCC--CCHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHHHHHHHhC
Confidence 3788887 433 34577777777777665 4454 1 11 1355555 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcE------EEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPI------ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~------~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
....+.+++.++++.++++ |++.|+||.|+.|. +++.++..++++.+++ +.+||+||||+|+|+|
T Consensus 149 ~~~~~~~~~~~aa~~l~~~------g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~v---~~~~t~GaGD~f~aa~ 219 (268)
T PRK12412 149 VKINSLEDMKEAAKKIHAL------GAKYVLIKGGSKLGTETAIDVLYDGETFDLLESEKI---DTTNTHGAGCTYSAAI 219 (268)
T ss_pred cCCCCHHHHHHHHHHHHhc------CCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeCcc---CCCCCCchHHHHHHHH
Confidence 6433445677888888874 99999999998753 4455566677888887 7899999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++++++|+++++|+++|..+....+..
T Consensus 220 aa~l~~g~~l~eA~~~A~~~~~~~i~~ 246 (268)
T PRK12412 220 TAELAKGKPVKEAVKTAKEFITAAIRY 246 (268)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888775
|
|
| >TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-16 Score=125.76 Aligned_cols=145 Identities=18% Similarity=0.194 Sum_probs=112.1
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh---h-------------hH-HHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI---N-------------YL-HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~---p-------------~~-~~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+. .+.+.+..+++.+++.+ ++|+ + .+ .++++++ +||..|++.|++
T Consensus 67 ~~~aiki-G~l--~~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 143 (254)
T TIGR00097 67 PVDAAKT-GML--ASAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLLEEEAIEALRKRLLPLATLITPNLPEAEALLG 143 (254)
T ss_pred CCCEEEE-CCc--CCHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCCCHHHHHHHHHhccccccEecCCHHHHHHHhC
Confidence 4677777 332 35677788888877664 4453 1 01 1355655 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCC----CcE-EEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGD----KPI-ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL 206 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~----~G~-~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~ 206 (239)
....+.++..++++.+.++ |++.|+||.|+ +|. +++++++.++++.+++ +++|++|+||+|.|+|+
T Consensus 144 ~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~GaGD~f~aala 214 (254)
T TIGR00097 144 TKIRTEQDMIKAAKKLREL------GPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAPRI---ETKNTHGTGCTLSAAIA 214 (254)
T ss_pred CCCCCHHHHHHHHHHHHhc------CCCEEEEeCCCCCCCceeEEEEECCeEEEEEeccc---CCCCCCChHHHHHHHHH
Confidence 6433345677788888874 99999999997 344 6677777778888887 78999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 207 SQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 207 ~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
+++++|+++++|+++|.+++...+.+
T Consensus 215 a~la~g~~l~eA~~~A~~~~~~~i~~ 240 (254)
T TIGR00097 215 ANLAKGLSLKEAVKEAKEFVTGAIRY 240 (254)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988875
|
This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species. |
| >PRK12413 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.5e-16 Score=127.16 Aligned_cols=146 Identities=18% Similarity=0.186 Sum_probs=103.3
Q ss_pred ceeEEEEe-ccccccChHHHHHHHHHhhh-CC---CCCh---hh-------------HHHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVS-GFFLTVSPESILEVAKVALS-CT---IRNI---NY-------------LHHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~-g~~~~~~~~~~~~~~~~~~~-~g---~~~~---p~-------------~~~~~~~~---~~n~~E~~~l~~ 131 (239)
..++..+. |+.+ +.+....+++..++ .+ ++|+ +. +.++++++ +||.+|++.|+|
T Consensus 68 ~~~~~~i~~G~l~--~~~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~~L~g 145 (253)
T PRK12413 68 DVPFSAIKIGLLP--NVEIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAELLSG 145 (253)
T ss_pred CCCCCEEEECCcC--CHHHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHHHHhC
Confidence 34444443 5543 33555566666653 34 5553 21 11456654 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-----E-EEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-----I-ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-----~-~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
....+.++..++++.++++ |++.|+||.|++| . +++++++ .+.+.+++ ..+|++||||+|+|+|
T Consensus 146 ~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~g~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~GaGDaf~a~~ 215 (253)
T PRK12413 146 KEIKTLEDMKEAAKKLYDL------GAKAVVIKGGNRLSQKKAIDLFYDGKE-FVILESPV---LEKNNIGAGCTFASSI 215 (253)
T ss_pred cCCCCHHHHHHHHHHHHHc------CCCEEEEeCCCCCCCCcceEEEEcCCE-EEEEeecc---cCCCCCChHHHHHHHH
Confidence 7444445677788888874 8999999999864 2 3444444 44455555 6789999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
++++.+|+++++|+++|.++-...+++.
T Consensus 216 ~~~l~~g~~l~ea~~~A~~~~~~~l~~~ 243 (253)
T PRK12413 216 ASQLVKGKSPLEAVKNSKDFVYQAIQQS 243 (253)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888777653
|
|
| >cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.9e-16 Score=121.65 Aligned_cols=144 Identities=20% Similarity=0.192 Sum_probs=109.8
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhC-C---CCCh---h-------------hH-HHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSC-T---IRNI---N-------------YL-HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-g---~~~~---p-------------~~-~~~~~~~---~~n~~E~~~l~~ 131 (239)
+++++.+ |+.. +.+.+..+.+.+++. + ++|+ + .+ ..+++++ +||..|++.|++
T Consensus 68 ~~~~i~~-G~l~--~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 144 (242)
T cd01169 68 PVDAIKI-GMLG--SAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELLTG 144 (242)
T ss_pred CCCEEEE-CCCC--CHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHHhC
Confidence 5788887 5543 467777777777765 4 4554 1 01 1333555 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-----EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-----IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL 206 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~ 206 (239)
....+.++.+++++.+.++ |++.||||.|++| .+++++++.++++.+++ +++|++|+||+|+|+|+
T Consensus 145 ~~~~~~~~~~~~~~~l~~~------g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~GaGD~f~a~l~ 215 (242)
T cd01169 145 LEIATEEDMMKAAKALLAL------GAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRI---DTKNTHGTGCTLSSAIA 215 (242)
T ss_pred CCCCCHHHHHHHHHHHHhc------CCCEEEEecCCCCCCceeEEEEECCcEEEEeccee---CCCCCCChHHHHHHHHH
Confidence 6433334566677777774 8999999999885 36667777778888877 68999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 207 SQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 207 ~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+++++|.++++|+++|+..-...+.
T Consensus 216 a~l~~g~~~~~A~~~A~~~~~~~i~ 240 (242)
T cd01169 216 ANLAKGLSLEEAVREAKEYVTQAIR 240 (242)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998776654
|
The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction. |
| >PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-15 Score=123.18 Aligned_cols=146 Identities=20% Similarity=0.189 Sum_probs=110.3
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh---h-------------hHH-HHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI---N-------------YLH-HRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~---p-------------~~~-~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+.. +.+.+..+++.+++.+ ++|+ + .+. ++++++ +||..|++.|++
T Consensus 73 ~~~ai~i-G~l~--~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 149 (266)
T PRK06427 73 RIDAVKI-GMLA--SAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLLADDAVAALRERLLPLATLITPNLPEAEALTG 149 (266)
T ss_pred CCCEEEE-CCcC--CHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhCcCeEEcCCHHHHHHHhC
Confidence 5677777 4433 4667777777777654 4443 1 111 355554 999999999998
Q ss_pred HcCCCccC-HHHHHHHHhcCCCCCCCCceEEEEeeCC--CcE----EEEECCeEEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 132 QQNFQTED-LHAIALKISNLPKQNPNRERITIITQGD--KPI----ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 132 ~~~~~~~~-~~~~~~~l~~~~~~~~~g~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
....+.++ .+++++.+.++ |++.||||.|+ +|. +++++++.++++.+++ +.+|++|+||+|+|+
T Consensus 150 ~~~~~~~~~~~~~a~~l~~~------g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~GaGD~f~a~ 220 (266)
T PRK06427 150 LPIADTEDEMKAAARALHAL------GCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRI---PTKNTHGTGCTLSAA 220 (266)
T ss_pred CCCCCcHHHHHHHHHHHHhc------CCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeE---CCCCCCChHHHHHHH
Confidence 63222233 67788888874 89999999998 553 5667666677888777 788999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
|++++++|.++++|+++|+.....++.+.
T Consensus 221 l~~~l~~g~~l~~A~~~A~~~~~~~i~~~ 249 (266)
T PRK06427 221 IAAELAKGASLLDAVQTAKDYVTRAIRHA 249 (266)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888763
|
|
| >PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.4e-15 Score=120.91 Aligned_cols=147 Identities=14% Similarity=0.144 Sum_probs=104.2
Q ss_pred ccceeEEEEecccccc-ChHHHHHHHHHhhh--CC---CCCh---h-------------hHH-HHhhHH---hcCHHHHH
Q psy6977 74 IQNAEYYYVSGFFLTV-SPESILEVAKVALS--CT---IRNI---N-------------YLH-HRFIYL---VLIDFEAL 127 (239)
Q Consensus 74 ~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~--~g---~~~~---p-------------~~~-~~~~~~---~~n~~E~~ 127 (239)
+.++|.+++ |+..+. ..+.+.+.++..+. .+ ++|+ + .+. ++++++ +||..|++
T Consensus 86 l~~~d~i~~-G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~ 164 (281)
T PRK08176 86 LRQLRAVTT-GYMGSASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQHLLPLAQGLTPNIFELE 164 (281)
T ss_pred cccCCEEEE-CCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccHHHHHHHHhHhhcCEeCCCHHHHH
Confidence 457899987 655431 12344555544432 23 3443 1 121 466666 99999999
Q ss_pred HHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-------EEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 128 AFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-------IILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-------~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
.|+|....+.++..+++++++++ |++.||||.|+.| ++++++++.+..+.+. ..+|++|+||+
T Consensus 165 ~L~g~~~~~~~~~~~~~~~l~~~------g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~GaGD~ 234 (281)
T PRK08176 165 ILTGKPCRTLDSAIAAAKSLLSD------TLKWVVITSAAGNEENQEMQVVVVTADSVNVISHPR----VDTDLKGTGDL 234 (281)
T ss_pred HHhCCCCCCHHHHHHHHHHHHhc------CCCEEEEeeccCCCCCCcEEEEEEeCCceEEEecCc----cCCCCCChhHH
Confidence 99986433344566778888874 9999999999988 5667766654444333 45799999999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
|+|+|++++++|.++++|+++|...-...+.
T Consensus 235 faa~~~a~l~~g~~l~~Av~~A~~~v~~~i~ 265 (281)
T PRK08176 235 FCAELVSGLLKGKALTDAAHRAGLRVLEVMR 265 (281)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987766664
|
|
| >PRK07105 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.2e-15 Score=122.37 Aligned_cols=147 Identities=15% Similarity=0.212 Sum_probs=104.7
Q ss_pred ceeEEEEecccccc-ChHHHHHHHHHhhhCC---CCCh---h--------------hHHHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTV-SPESILEVAKVALSCT---IRNI---N--------------YLHHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~g---~~~~---p--------------~~~~~~~~~---~~n~~E~~~l~~ 131 (239)
.++.+.+ |+.... .-+.+.++++.+++.+ ++|+ + .+.++++++ +||..|+..|++
T Consensus 75 ~~~aik~-G~l~~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~g 153 (284)
T PRK07105 75 KFDAIYS-GYLGSPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLLLD 153 (284)
T ss_pred ccCEEEE-CcCCCHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHHcC
Confidence 6788776 654431 1234445555445444 4444 1 112566666 999999999988
Q ss_pred HcCC----CccCHHHHHHHHhcCCCCCCCCceEEEEee-----CCCcEEEEECC--eEEEEeccCCCCCCcccCCCCchh
Q psy6977 132 QQNF----QTEDLHAIALKISNLPKQNPNRERITIITQ-----GDKPIILSQNG--KTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 132 ~~~~----~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~-----G~~G~~~~~~~--~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
.... +.+++.++++.+.++ |++.||||. |..|+++++++ ..++.+.+.+ .+|++||||+
T Consensus 154 ~~~~~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~~----~~~~~GaGD~ 223 (284)
T PRK07105 154 KPYLEKSYSEEEIKQLLRKLADL------GPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCKYI----PAHYPGTGDI 223 (284)
T ss_pred CCcCcCCCCHHHHHHHHHHHHhc------CCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeeccc----CCCcCChhHH
Confidence 6321 234566777777764 899999999 67788888653 3455555543 4799999999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
|+|+|++++++|+++++|+++|..+....+.+.
T Consensus 224 f~aa~~~~l~~g~~l~~av~~A~~~~~~~i~~~ 256 (284)
T PRK07105 224 FTSVITGSLLQGDSLPIALDRAVQFIEKGIRAT 256 (284)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888754
|
|
| >PRK08573 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-15 Score=129.10 Aligned_cols=135 Identities=21% Similarity=0.175 Sum_probs=106.4
Q ss_pred ChHHHHHHHHHhhhCC---CCCh---h-----h--------H-HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 90 SPESILEVAKVALSCT---IRNI---N-----Y--------L-HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 90 ~~~~~~~~~~~~~~~g---~~~~---p-----~--------~-~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
+.+.+..+++.+++.+ ++|+ + . + .++++++ ++|..|+..|+|....+.++.+++++.
T Consensus 82 ~~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~~~~~~~l~~~llp~adli~pN~~Ea~~L~g~~i~~~~d~~~aa~~ 161 (448)
T PRK08573 82 NREIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLREDAVDALIKRLLPLATVVTPNRPEAEKLTGMKIRSVEDARKAAKY 161 (448)
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhccCEEEcCCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 4688889999999887 4553 1 1 1 2455654 999999999998643344567778888
Q ss_pred HhcCCCCCCCCceEEEEeeCC----CcE-EEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHH
Q psy6977 147 ISNLPKQNPNRERITIITQGD----KPI-ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIEC 221 (239)
Q Consensus 147 l~~~~~~~~~g~~~vvvt~G~----~G~-~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 221 (239)
+.+. .|++.|+||.|. +++ +++.+++.++++.+++ +++|++||||+|+|+|++++++|+++++|+++
T Consensus 162 L~~~-----~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v---~~~dt~GAGDaFsAa~aa~l~~G~~l~eAl~~ 233 (448)
T PRK08573 162 IVEE-----LGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAPRV---ESGCTHGTGCSFSAAIAAGLAKGLDPEEAIKT 233 (448)
T ss_pred HHHH-----cCCCEEEEecccCCCCceeEEEEECCeEEEEEecCc---CCCCCCChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 8742 389999999985 344 4556667778888887 78999999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q psy6977 222 GVWAAQHIIQV 232 (239)
Q Consensus 222 a~~~a~~~~~~ 232 (239)
|+.+....+..
T Consensus 234 A~~~~~~al~~ 244 (448)
T PRK08573 234 AKKFITMAIKY 244 (448)
T ss_pred HHHHHHHHHHH
Confidence 99998888883
|
|
| >PRK12616 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.8e-15 Score=118.92 Aligned_cols=145 Identities=19% Similarity=0.149 Sum_probs=108.3
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh-h---------------hHH-HHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI-N---------------YLH-HRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~-p---------------~~~-~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+.. +.+.+..+.+.+++.+ ++|+ . .+. .+++++ +||..|++.|++
T Consensus 74 ~~~aiki-G~l~--s~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L~g 150 (270)
T PRK12616 74 GVDAMKT-GMLP--TVDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQLSG 150 (270)
T ss_pred CCCEEEE-CCCC--CHHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHHcC
Confidence 4677777 5443 3466666666666554 4454 1 011 345444 999999999987
Q ss_pred H-cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcE------EEEECCeEEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 132 Q-QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPI------ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 132 ~-~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~------~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
. ...+.+++.++++.+.++ |++.||||.|..|. +++++++.++++.+++ +.+|++|+||+|.|+
T Consensus 151 ~~~~~~~~~~~~aa~~l~~~------G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~GaGD~fsaa 221 (270)
T PRK12616 151 MGEIKTVEQMKEAAKKIHEL------GAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (270)
T ss_pred CCCCCCHHHHHHHHHHHHHc------CCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeeee---CCCCCCcHHHHHHHH
Confidence 5 233445677888888874 99999999998762 5566666677787777 788999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
|++++++|.++++|+++|.......+..
T Consensus 222 laa~l~~g~~l~~Av~~A~~~~~~~i~~ 249 (270)
T PRK12616 222 VTAELAKGSEVKEAIYAAKEFITAAIKE 249 (270)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988877765
|
|
| >PTZ00344 pyridoxal kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-12 Score=107.13 Aligned_cols=108 Identities=19% Similarity=0.198 Sum_probs=79.5
Q ss_pred HHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEe---eCCCc----EEEEEC------Ce
Q psy6977 114 HRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT---QGDKP----IILSQN------GK 177 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt---~G~~G----~~~~~~------~~ 177 (239)
++++++ ++|.+|+..|+|....+.++..++++.+.+. |++.|||| .|.+| +++.+. ++
T Consensus 135 ~ll~~~dii~pN~~E~~~L~g~~~~~~~~~~~~~~~l~~~------g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~ 208 (296)
T PTZ00344 135 ELIPYADVITPNQFEASLLSGVEVKDLSDALEAIDWFHEQ------GIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNK 208 (296)
T ss_pred HHhhhCCEEeCCHHHHHHHhCCCCCCHHHHHHHHHHHHHh------CCCEEEEEeecCCCCCCcEEEEEEeccccCCCce
Confidence 455555 9999999999986333334566677778774 89999999 55566 444431 23
Q ss_pred EEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 178 TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 178 ~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
.+....|++ + ++++|+||+|+|+|++.+.+| ++++|+++|.+.-...+..
T Consensus 209 ~~~~~~~~~---~-~~~~GaGD~f~A~~~a~l~~g-~~~~a~~~A~a~~~~~i~~ 258 (296)
T PTZ00344 209 RFTGKVPYI---E-GRYTGTGDLFAALLLAFSHQH-PMDLAVGKAMGVLQDIIKA 258 (296)
T ss_pred eEEEecccc---C-CCCCCchHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHH
Confidence 455666665 3 577999999999999778888 9999999998877766544
|
|
| >PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-12 Score=113.29 Aligned_cols=146 Identities=16% Similarity=0.189 Sum_probs=108.7
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh------------h----hHH-HHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI------------N----YLH-HRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~------------p----~~~-~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+.. +.+.+..+++.+++.+ ++|+ + .+. ++++++ +||..|++.|++
T Consensus 78 ~~~aik~-G~l~--~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~~~~~~~l~~~Ll~~adiitPN~~Ea~~L~g 154 (502)
T PLN02898 78 PVDVVKT-GMLP--SAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAGPSILSALREELLPLATIVTPNVKEASALLG 154 (502)
T ss_pred CCCEEEE-CCcC--CHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCCHHHHHHHHHhhhccCeEEcCCHHHHHHHhC
Confidence 4566666 5443 3677777777777664 3333 0 111 445544 999999999987
Q ss_pred Hc-CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc------EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 132 QQ-NFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP------IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 132 ~~-~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
.. ..+.++..++++.+.++ |++.||||.|..+ .+++++++.++++.+++ +.+|++|+||+|.|+
T Consensus 155 ~~~~~~~~~~~~~a~~l~~~------G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i---~~~~t~GaGD~fsaa 225 (502)
T PLN02898 155 GDPLETVADMRSAAKELHKL------GPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSRI---KTRNTHGTGCTLASC 225 (502)
T ss_pred CCCCCCHHHHHHHHHHHHhc------CCCEEEEcCCCCCCCCcceEEEEcCCeEEEEeccee---CCCCCCchhhhHHHH
Confidence 42 12334567778888774 8999999999753 35566666677887777 678999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
|++++++|+++++|+++|..+....+.+.
T Consensus 226 iaa~l~~G~~l~eAv~~A~~~v~~ai~~~ 254 (502)
T PLN02898 226 IAAELAKGSDMLSAVKVAKRYVETALEYS 254 (502)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999888764
|
|
| >PTZ00347 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-12 Score=114.44 Aligned_cols=150 Identities=15% Similarity=0.155 Sum_probs=105.5
Q ss_pred hcccceeEEEE-eccccccChHHHHHHHHHhhhCC-CCCh-h------h----------HH----HHhhHH---hcCHHH
Q psy6977 72 KLIQNAEYYYV-SGFFLTVSPESILEVAKVALSCT-IRNI-N------Y----------LH----HRFIYL---VLIDFE 125 (239)
Q Consensus 72 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g-~~~~-p------~----------~~----~~~~~~---~~n~~E 125 (239)
.++++.++..+ .|+.. +.+.+..+++.++... ++|+ . . +. ++++++ +||..|
T Consensus 293 ~l~~d~~~~~Ik~G~l~--s~e~i~~i~~~l~~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitPN~~E 370 (504)
T PTZ00347 293 SVMSDFNISVVKLGLVP--TARQLEIVIEKLKNLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITPNIPE 370 (504)
T ss_pred HHHhCCCCCEEEECCcC--CHHHHHHHHHHhcCCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeCCHHH
Confidence 34444443333 46544 3677777777776333 4553 0 0 10 344544 999999
Q ss_pred HHHHHHHc-CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-------EEEEEC--CeEEEEeccCCCCCCcccCC
Q psy6977 126 ALAFAKQQ-NFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-------IILSQN--GKTTEFPVQRLPAESVVDTN 195 (239)
Q Consensus 126 ~~~l~~~~-~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-------~~~~~~--~~~~~~~~~~~~~~~vvdt~ 195 (239)
++.|+|.. ..+.++..++++.+.++ |++.||||.|.+| .+++.+ ++.++++.+++ +++|++
T Consensus 371 a~~L~g~~~~~~~~~~~~aa~~l~~~------G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i---~~~~~~ 441 (504)
T PTZ00347 371 AERILGRKEITGVYEARAAAQALAQY------GSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANRI---ATINTH 441 (504)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHhc------CCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeE---CCCCCC
Confidence 99999852 22334566777888774 9999999999863 344443 35677888877 789999
Q ss_pred CCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 196 GAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 196 GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
|+||+|+|+|++++++|.++++|+++|...-...+..
T Consensus 442 GaGD~fsaaiaa~la~G~~l~eAv~~A~~~v~~~i~~ 478 (504)
T PTZ00347 442 GTGCTLASAISSFLARGYTVPDAVERAIGYVHEAIVR 478 (504)
T ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998877766654
|
|
| >cd01171 YXKO-related B | Back alignment and domain information |
|---|
Probab=99.36 E-value=1e-11 Score=99.37 Aligned_cols=148 Identities=14% Similarity=0.077 Sum_probs=104.0
Q ss_pred hcccceeEEEEeccccccCh-HHHHHHHHHhhhCC---CCCh-hh--HHH-----HhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP-ESILEVAKVALSCT---IRNI-NY--LHH-----RFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~g---~~~~-p~--~~~-----~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
..+.+.++++++.. ++. +.+..+++.+++.+ ++|. .. +.. +.+.. +||..|++.|++....+
T Consensus 73 ~~~~~~d~v~ig~g---l~~~~~~~~i~~~~~~~~~pvVlDa~~~~~~~~~~~~~~~~~~~iltPn~~E~~~L~g~~~~~ 149 (254)
T cd01171 73 ELLERADAVVIGPG---LGRDEEAAEILEKALAKDKPLVLDADALNLLADEPSLIKRYGPVVLTPHPGEFARLLGALVEE 149 (254)
T ss_pred hhhccCCEEEEecC---CCCCHHHHHHHHHHHhcCCCEEEEcHHHHHhhcChhhhccCCCEEECCCHHHHHHHhCCChhh
Confidence 45678899999542 333 67788888888776 6676 21 221 22332 99999999999863211
Q ss_pred -ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCH
Q psy6977 137 -TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215 (239)
Q Consensus 137 -~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~ 215 (239)
.++..++++.+.++ + +.+|+..|. +.+++++++.+++..+.. +.+++.|+||+|.|.+.+.+.+|.++
T Consensus 150 ~~~~~~~~a~~l~~~------~-~~~vvlkG~-~~~i~~~~~~~~~~~~~~---~~~~~~GaGD~lag~iaa~la~g~~~ 218 (254)
T cd01171 150 IQADRLAAAREAAAK------L-GATVVLKGA-VTVIADPDGRVYVNPTGN---PGLATGGSGDVLAGIIAALLAQGLSP 218 (254)
T ss_pred hhhHHHHHHHHHHHH------c-CcEEEEcCC-CCEEECCCCcEEEECCCC---cccccCchHHHHHHHHHHHHHcCCCH
Confidence 23455677777774 4 355556675 555566544455666665 78899999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy6977 216 SVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~ 233 (239)
.+|+++|+.+.+.+.+..
T Consensus 219 ~eA~~~A~~~~~~a~~~~ 236 (254)
T cd01171 219 LEAAALAVYLHGLAGDLA 236 (254)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999888887653
|
subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily. |
| >PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.3e-11 Score=109.66 Aligned_cols=145 Identities=14% Similarity=0.169 Sum_probs=105.6
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh-h---------------hHHHHhhHH---hcCHHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI-N---------------YLHHRFIYL---VLIDFEALAFAKQ 132 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~-p---------------~~~~~~~~~---~~n~~E~~~l~~~ 132 (239)
+.+.+-+ |+. -+.+.+..+++.+++.+ ++|+ . .+.++++.+ +||..|+..|+|.
T Consensus 310 ~~~aiKi-GmL--~s~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~~~~~~~~l~~Llp~adlItPN~~Ea~~L~g~ 386 (755)
T PRK09517 310 TVDAVKL-GML--GSADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLLDADATEALRRLAVHVDVVTPNIPELAVLCGE 386 (755)
T ss_pred CCCEEEE-CCC--CCHHHHHHHHHHHHhCCCCCEEEecccccCCCCCCCCHHHHHHHHHHhCcccCccCCHHHHHHHhCC
Confidence 4567776 433 24567777777777642 5554 1 122455555 9999999999984
Q ss_pred c-CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCC------CcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 133 Q-NFQTEDLHAIALKISNLPKQNPNRERITIITQGD------KPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 133 ~-~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~------~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
. ..+.++..++++.+.+. .| ..||||.|. .++++..++..++++.+++ +.+||+|+||+|.|+|
T Consensus 387 ~~~~~~~d~~~aa~~L~~~-----~g-~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v---~~~~t~GaGDtfsaai 457 (755)
T PRK09517 387 APAITMDEAIAQARGFART-----HG-TIVIVKGGHLTGDLADNAVVRPDGSVHQVENPRV---NTTNSHGTGCSLSAAL 457 (755)
T ss_pred CCCCCHHHHHHHHHHHHHh-----cC-CEEEEcCCcCCCCccceEEEeCCCeEEEEeeccc---CCCCCcChHHHHHHHH
Confidence 2 12334566677777664 14 489999983 4666665555678888887 7899999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++++++|.++++|+++|...-...+.+
T Consensus 458 aa~La~G~sl~eAv~~A~~~v~~~i~~ 484 (755)
T PRK09517 458 ATLIAAGESVEKALEWATRWLNEALRH 484 (755)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988877765
|
|
| >COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.2e-11 Score=93.90 Aligned_cols=144 Identities=19% Similarity=0.173 Sum_probs=112.0
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh--------hh--------H-HHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI--------NY--------L-HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~--------p~--------~-~~~~~~~---~~n~~E~~~l~~ 131 (239)
+++.+-+ | +--+.+++..+.+..++++ ++|+ +. + .+++|++ .||..|++.|+|
T Consensus 72 ~v~avKt-G--ML~~~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L~g 148 (263)
T COG0351 72 PVDAVKT-G--MLGSAEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEALSG 148 (263)
T ss_pred CCCEEEE-C--CcCCHHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHHcC
Confidence 4556655 2 2234677777777777766 4444 11 1 1677777 899999999999
Q ss_pred H-cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc----EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHH
Q psy6977 132 Q-QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP----IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL 206 (239)
Q Consensus 132 ~-~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G----~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~ 206 (239)
. ...+.++..++++.+.++ |++.|+|+-|... -++|+++..+.+..|.+ .-.+|-|+|++|.|++.
T Consensus 149 ~~~i~~~~d~~~a~~~i~~~------g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~ri---~t~~tHGTGCTlSaAIa 219 (263)
T COG0351 149 LPKIKTEEDMKEAAKLLHEL------GAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAPRI---PTKNTHGTGCTLSAAIA 219 (263)
T ss_pred CCccCCHHHHHHHHHHHHHh------CCCEEEEcCCCCCCCceeEEEcCCceEEEecccc---CCCCCCCccHHHHHHHH
Confidence 4 555677788887778785 9999999987643 35667777888889988 67789999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 207 SQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 207 ~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+.|++|.++++|++.|-..-..+++
T Consensus 220 a~LA~G~~l~~AV~~Ak~fv~~AI~ 244 (263)
T COG0351 220 ANLAKGLSLEEAVKKAKEFVTRAIR 244 (263)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988877776
|
|
| >PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.1e-11 Score=95.97 Aligned_cols=144 Identities=18% Similarity=0.172 Sum_probs=100.7
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC---CCCh----------------hhHH-HHhhHH---hcCHHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI----------------NYLH-HRFIYL---VLIDFEALAFAKQ 132 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~----------------p~~~-~~~~~~---~~n~~E~~~l~~~ 132 (239)
+.+.+.+ |+.. +.+.+..+.+..++.+ ++|+ +.+. +++|++ .||..|+..|++.
T Consensus 60 ~~~aiki-G~l~--~~~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Llp~AdiitPN~~Ea~~L~g~ 136 (246)
T PF08543_consen 60 KFDAIKI-GYLG--SAEQVEIIADFLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELLPLADIITPNLTEAELLTGR 136 (246)
T ss_dssp C-SEEEE--S-S--SHHHHHHHHHHHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCGGG-SEEE-BHHHHHHHHTS
T ss_pred cccEEEE-cccC--CchhhhhHHHHHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccCCcCeEEeCCHHHHHHHhCC
Confidence 6788887 5543 3455555555554444 3333 1112 477777 9999999999996
Q ss_pred cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC----c---EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 133 QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK----P---IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~----G---~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
...+.+++.+++++++++ |++.||||-+.. + -+++++++.+.+..+.+ +..+..|.||.|.|++
T Consensus 137 ~i~~~~~~~~~~~~l~~~------G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~GTGd~fss~l 207 (246)
T PF08543_consen 137 EINSEEDIEEAAKALLAL------GPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRI---PTGSFHGTGDLFSSAL 207 (246)
T ss_dssp --SSHHHHHHHHHHHHHT------S-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEE---CTSGCTTHHHHHHHHH
T ss_pred CCCChHhHHHHHHHHHHh------CCceEEEeeeccccccccccceeeeccceeecceeEE---cCCCCCCchhHHHHHH
Confidence 555667788899999995 999999998763 2 23445677777777766 3467899999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+..|++|.++++|++.|...-...+.
T Consensus 208 aa~l~~g~~l~~Av~~A~~~v~~~i~ 233 (246)
T PF08543_consen 208 AAFLAKGYSLEEAVEKAKNFVRRAIK 233 (246)
T ss_dssp HHHHHTTSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887766665
|
7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D .... |
| >TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related | Back alignment and domain information |
|---|
Probab=99.28 E-value=8e-11 Score=95.08 Aligned_cols=148 Identities=12% Similarity=-0.009 Sum_probs=101.6
Q ss_pred hcccceeEEEEeccccccChHHHHHHHHHhhhCC---CCCh--hhHH-HH-----hhHH-hcCHHHHHHHHHHcCCCccC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI--NYLH-HR-----FIYL-VLIDFEALAFAKQQNFQTED 139 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~~-~~-----~~~~-~~n~~E~~~l~~~~~~~~~~ 139 (239)
+.++.++++++++..+. .+.+..+++.+++.+ ++|. ..+. .. -+.+ +||..|++.|++....+.++
T Consensus 88 ~~~~~~davvig~Gl~~--~~~~~~l~~~~~~~~~pvVlDa~g~~l~~~~~~~~~~~~vItPN~~El~~L~g~~~~~~~~ 165 (272)
T TIGR00196 88 ELLERYDVVVIGPGLGQ--DPSFKKAVEEVLELDKPVVLDADALNLLTYDKPKREGEVILTPHPGEFKRLLGLVNEIQGD 165 (272)
T ss_pred hhhccCCEEEEcCCCCC--CHHHHHHHHHHHhcCCCEEEEhHHHHHHhhcccccCCCEEECCCHHHHHHHhCCchhhhhh
Confidence 55678899999764332 233677888888777 6777 3332 21 1223 99999999999864434456
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHH
Q psy6977 140 LHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219 (239)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~ 219 (239)
..++++++.+. .+.+|++.|.+++++..++..+.. ..+. ...+++|+||++.|.+...+.+|.++.+|+
T Consensus 166 ~~~aa~~l~~~-------~~~vVv~kG~~~~i~~~~~~~~~~-~~~~---~~~~~~GaGD~lag~iaa~la~g~~~~~A~ 234 (272)
T TIGR00196 166 RLEAAQDIAQK-------LQAVVVLKGAADVIAAPDGDLWIN-KTGN---AALAKGGTGDVLAGLIGGLLAQNLDPFDAA 234 (272)
T ss_pred HHHHHHHHHHH-------hCCEEEEcCCCCEEEcCCCeEEEE-CCCC---CccCCCCchHHHHHHHHHHHhCCCCHHHHH
Confidence 77777777774 346888899999877644555543 4444 678899999995555555566899999999
Q ss_pred HHH---HHHHHHHHHh
Q psy6977 220 ECG---VWAAQHIIQV 232 (239)
Q Consensus 220 ~~a---~~~a~~~~~~ 232 (239)
..| ...|+..+..
T Consensus 235 ~~a~~~~~~a~~~~~~ 250 (272)
T TIGR00196 235 CNAAFAHGLAGDLALK 250 (272)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 777 6666665533
|
The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis. |
| >PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.1e-11 Score=105.18 Aligned_cols=108 Identities=16% Similarity=0.151 Sum_probs=81.5
Q ss_pred HHhhHH---hcCHHHHHHHHHHcC-CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC------cEEEEECCeEEEEec
Q psy6977 114 HRFIYL---VLIDFEALAFAKQQN-FQTEDLHAIALKISNLPKQNPNRERITIITQGDK------PIILSQNGKTTEFPV 183 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~------G~~~~~~~~~~~~~~ 183 (239)
++++++ +||..|++.|+|... .+.++..++++.+.+. +.+.||||.|.. ++++..+++.++++.
T Consensus 153 ~Ll~~advItPN~~Ea~~Ltg~~~~~~~~d~~~aa~~L~~~------~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~ 226 (530)
T PRK14713 153 ELVPRADLITPNLPELAVLLGEPPATTWEEALAQARRLAAE------TGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPG 226 (530)
T ss_pred HHhhhhheecCChHHHHHHhCCCCCCCHHHHHHHHHHHHHh------cCCEEEEeCCCCCCCcceEEEEcCCCeEEEEee
Confidence 566665 999999999998532 1334556667777654 346899998863 234433444677887
Q ss_pred cCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q psy6977 184 QRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 184 ~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~ 230 (239)
+++ +.+|++|+||+|.|+|++++++|.++++|+++|...-...+
T Consensus 227 ~~v---~~~~t~GaGD~fsaalaa~La~G~~l~eAv~~A~~~v~~~i 270 (530)
T PRK14713 227 PRV---DTRNTHGTGCSLSSALATRLGRGGDWAAALRWATAWLHGAI 270 (530)
T ss_pred eee---CCCCCCcHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 877 78999999999999999999999999999999988444444
|
|
| >PLN02978 pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.3e-10 Score=92.95 Aligned_cols=145 Identities=16% Similarity=0.136 Sum_probs=96.8
Q ss_pred eeEEEEeccccc-cChHHHHHHHHHhhhCC-----CCCh---h------------hH-HHHhhHH---hcCHHHHHHHHH
Q psy6977 77 AEYYYVSGFFLT-VSPESILEVAKVALSCT-----IRNI---N------------YL-HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 77 ~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g-----~~~~---p------------~~-~~~~~~~---~~n~~E~~~l~~ 131 (239)
.+.+.+ |+... -..+.+.++++.++..+ ++|+ + .+ .++++++ +||..|+..|+|
T Consensus 87 ~~ai~~-G~l~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~~~~~~~~~~~ll~~adiitPN~~Ea~~L~g 165 (308)
T PLN02978 87 YTHLLT-GYIGSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVPPELVPVYREKVVPLATMLTPNQFEAEQLTG 165 (308)
T ss_pred cCEEEe-cccCCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCChhHHHHHHHHHHhhCCeeccCHHHHHHHhC
Confidence 566655 55433 22356777777776532 3344 1 01 1366665 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCC-CcEEE-EE--------CCeEEEEeccCCCCCCcccCCCCchhh
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGD-KPIIL-SQ--------NGKTTEFPVQRLPAESVVDTNGAGDSF 201 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~-~G~~~-~~--------~~~~~~~~~~~~~~~~vvdt~GaGDaf 201 (239)
....+.++..++++.+.++ |++.||||-+. +|.++ .. .++.+++..+++ +.. +.|+||+|
T Consensus 166 ~~~~~~~~~~~a~~~l~~~------g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~-~~GtGD~f 235 (308)
T PLN02978 166 IRIVTEEDAREACAILHAA------GPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKI---PAY-FTGTGDLM 235 (308)
T ss_pred CCCCCHHHHHHHHHHHHHh------CCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCC---CCC-CCCchHHH
Confidence 6333334566777778774 88999997644 34332 21 134567777776 444 48999999
Q ss_pred hHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHh
Q psy6977 202 VGGFLSQLIKG-EPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 202 ~ag~~~~l~~g-~~~~~a~~~a~~~a~~~~~~ 232 (239)
+|.+++.+.+| .++++|++.|...-...+..
T Consensus 236 sA~laa~l~~g~~~l~~A~~~A~~~v~~~i~~ 267 (308)
T PLN02978 236 AALLLGWSHKYPDNLDKAAELAVSSLQAVLRR 267 (308)
T ss_pred HHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 99888888887 79999999998877666554
|
|
| >COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.1e-09 Score=86.39 Aligned_cols=148 Identities=15% Similarity=0.146 Sum_probs=107.5
Q ss_pred hcccceeEEEEecccccc-ChHHHHHHHHHhhhCC-----CCCh---------------hhHH-HHhhHH---hcCHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTV-SPESILEVAKVALSCT-----IRNI---------------NYLH-HRFIYL---VLIDFEA 126 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~g-----~~~~---------------p~~~-~~~~~~---~~n~~E~ 126 (239)
..+.++|.++ +||.... .-..+..+++..|+.+ .+|+ +.+. +++|.+ .||..|+
T Consensus 69 ~~~~~~davl-tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fEL 147 (281)
T COG2240 69 DKLGECDAVL-TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFEL 147 (281)
T ss_pred ccccccCEEE-EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHHH
Confidence 3667888887 4887652 2356777777777664 3333 1122 677777 9999999
Q ss_pred HHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCC-----CcEEEEECC---eEEEEeccCCCCCCcccCCCCc
Q psy6977 127 LAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGD-----KPIILSQNG---KTTEFPVQRLPAESVVDTNGAG 198 (239)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~-----~G~~~~~~~---~~~~~~~~~~~~~~vvdt~GaG 198 (239)
+.|+|..-.+.++..++++.+.+. |++.|+||.=. .|.+++... ..+|.. |.+ ..+++|.|
T Consensus 148 e~Ltg~~~~~~~da~~aa~~L~~~------gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~~v----~~~~~GtG 216 (281)
T COG2240 148 EILTGKPLNTLDDAVKAARKLGAD------GPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-PLV----PFIPNGTG 216 (281)
T ss_pred HHHhCCCCCCHHHHHHHHHHHhhc------CCCEEEEecccccCCCCceEEEeccchhhhhhhh-hcC----CCCCCCch
Confidence 999998766677788888888874 99999999533 344554432 344444 454 22389999
Q ss_pred hhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 199 DSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 199 Daf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
|.|+|-|++.+++|.++.+++..++.+-...++
T Consensus 217 DL~sallla~lL~g~~~~~al~~~~~~V~evl~ 249 (281)
T COG2240 217 DLFSALLLARLLEGLSLTQALERATAAVYEVLQ 249 (281)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888777665
|
|
| >cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.8e-09 Score=85.50 Aligned_cols=150 Identities=13% Similarity=0.055 Sum_probs=100.6
Q ss_pred hhhcccceeEEEEecccc-ccChHHHHHHHHHhhhCC---CCCh------hh----HHHHhhH--H---hcCHHHHHHHH
Q psy6977 70 NNKLIQNAEYYYVSGFFL-TVSPESILEVAKVALSCT---IRNI------NY----LHHRFIY--L---VLIDFEALAFA 130 (239)
Q Consensus 70 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~g---~~~~------p~----~~~~~~~--~---~~n~~E~~~l~ 130 (239)
..+.++++|++++.--.+ +.+.+.+...++.+++.+ ++|+ +. ..++++. + +||..|+..|+
T Consensus 43 ~~~~l~~~d~vvi~~G~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~~~~~~~~~~~ll~~~~~~ilTPN~~Ea~~L~ 122 (242)
T cd01170 43 VEELAKIAGALVINIGTLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGATSFRTEVAKELLAEGQPTVIRGNASEIAALA 122 (242)
T ss_pred HHHHHHHcCcEEEeCCCCChHHHHHHHHHHHHHHhcCCCEEEcccccCcchhHHHHHHHHHhcCCCeEEcCCHHHHHHHh
Confidence 346788999999942111 112244555555677666 5554 11 1244444 3 99999999999
Q ss_pred HHcCCC---------ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhh
Q psy6977 131 KQQNFQ---------TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSF 201 (239)
Q Consensus 131 ~~~~~~---------~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf 201 (239)
+..... .++..+.++.+.++ +...|++| |.... ++++++.++++..+. .+.+..|+||+|
T Consensus 123 g~~~~~~~~~~~~~~~~~~~~aa~~l~~~------~~~~Vllk-G~~d~-l~~~~~~~~~~~~~~---~~~~v~GtGdtL 191 (242)
T cd01170 123 GLTGLGKGVDSSSSDEEDALELAKALARK------YGAVVVVT-GEVDY-ITDGERVVVVKNGHP---LLTKITGTGCLL 191 (242)
T ss_pred CCCCCcCcccCCCcchHHHHHHHHHHHHH------hCCEEEEE-CCCcE-EEECCEEEEEeCCCc---cccCCCchHHHH
Confidence 864211 34567777777765 33468888 66665 456677777775443 445568999999
Q ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q psy6977 202 VGGFLSQLIKGEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 202 ~ag~~~~l~~g~~~~~a~~~a~~~a~~~~ 230 (239)
.|++...+.+|.++.+|+..|...-+...
T Consensus 192 a~aiAa~LA~g~~~~~A~~~A~~~~~~a~ 220 (242)
T cd01170 192 GAVIAAFLAVGDDPLEAAVSAVLVYGIAG 220 (242)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998866544443
|
A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate. |
| >PTZ00493 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.4e-08 Score=81.50 Aligned_cols=111 Identities=9% Similarity=0.024 Sum_probs=81.0
Q ss_pred HHhhHH---hcCHHHHHHHHHH----cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc----------E--EEEE
Q psy6977 114 HRFIYL---VLIDFEALAFAKQ----QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP----------I--ILSQ 174 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~----~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G----------~--~~~~ 174 (239)
.++|++ .||..|++.|.+. ...+.+++.++++.+.+. .|++.|+||-|... + +++.
T Consensus 135 ~Llp~a~viTPN~~Ea~~L~g~~~~~~~~~~~~~~~aA~~l~~~-----~G~~~VliKGGh~~~~~~~~~~~~~~D~l~~ 209 (321)
T PTZ00493 135 LICPISCIITPNFYECKVILEALDCQMDLSKANMTELCKLVTEK-----LNINACLFKSCNVGENSAEENEVYAVDHLCI 209 (321)
T ss_pred HhhccCEEECCCHHHHHHHhCCCcccCCCCHHHHHHHHHHHHHh-----cCCCEEEECcCCCcccccccccccceeEEec
Confidence 466766 8999999999871 112345677888888763 28999999977521 1 2322
Q ss_pred -------C--------C------eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 175 -------N--------G------KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 175 -------~--------~------~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
. + +.+++..+.+ ...++.|+||+|.+++++.|++|.++++|++.|...-..++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri---~~~~~hGTGc~fASAIAa~LA~G~~l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 210 RNVGSYPTGEKQQIDAGGVTYLYDVYKLRSKRK---PGKDIHGTGCTLSTAIACYLAKKHNILQSCIESKKYIYNCIRY 285 (321)
T ss_pred CCccccccccccccccccccccceEEEEEeccc---CCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 1 1 1345666665 4567789999999999999999999999999998776666654
|
|
| >KOG2599|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.8e-07 Score=71.03 Aligned_cols=140 Identities=19% Similarity=0.188 Sum_probs=94.3
Q ss_pred ceeEEEEeccccccCh-HHHHHHHHHhhhCC-----CCCh---------------hhHHHHhhH-H---hcCHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSP-ESILEVAKVALSCT-----IRNI---------------NYLHHRFIY-L---VLIDFEALAFA 130 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~g-----~~~~---------------p~~~~~~~~-~---~~n~~E~~~l~ 130 (239)
..+.++ +||.++.+. ..+.++++..|+.+ ++|+ |.+.++++. + .||..|++.|+
T Consensus 81 ~Y~~vL-TGY~~n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~eelipvYr~~i~~ladiiTPNqFE~EiLt 159 (308)
T KOG2599|consen 81 KYDAVL-TGYLPNVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPEELIPVYRDLIIPLADIITPNQFEAEILT 159 (308)
T ss_pred ccceee-eeccCChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccHHHHHHHHHhhcchhhhcCCcchhhhhhc
Confidence 566654 588877543 56666777666655 3333 223344433 3 89999999999
Q ss_pred HHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC----c-EEE---EE-CCeEEEEeccCCCCCCcccCCCCchhh
Q psy6977 131 KQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK----P-IIL---SQ-NGKTTEFPVQRLPAESVVDTNGAGDSF 201 (239)
Q Consensus 131 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~----G-~~~---~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf 201 (239)
|..-.+.++..++.++++++ |++.||||...- | .++ .. +.+.+.+..|.+ ..+ -+|.||-|
T Consensus 160 g~~I~t~eda~~a~~~lhq~------~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~ipki---~~~-FtGTGDLf 229 (308)
T KOG2599|consen 160 GMEIRTEEDAKRAVEKLHQK------GVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYLIPKI---DGV-FTGTGDLF 229 (308)
T ss_pred CCeeccHHHHHHHHHHHHHh------CCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEEeccc---ceE-EecccHHH
Confidence 98777788888999999995 899999996543 3 111 22 234666666665 233 36999999
Q ss_pred hHHHHHHHHcC---CCHHHHHHHHHHHH
Q psy6977 202 VGGFLSQLIKG---EPLSVCIECGVWAA 226 (239)
Q Consensus 202 ~ag~~~~l~~g---~~~~~a~~~a~~~a 226 (239)
+|-+++.+... .++..++..+...-
T Consensus 230 saLLla~~~~~~~~~~l~~a~e~~ls~~ 257 (308)
T KOG2599|consen 230 SALLLAWLHESPDNDDLSKAVEQVLSSV 257 (308)
T ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHHH
Confidence 99888887654 56777766655443
|
|
| >PRK09355 hydroxyethylthiazole kinase; Validated | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.9e-06 Score=66.37 Aligned_cols=147 Identities=12% Similarity=0.069 Sum_probs=92.6
Q ss_pred hhhcccceeEEEEeccccccChHH---HHHHHHHhhhCC---CCCh------hhHH----HHhh--H--H-hcCHHHHHH
Q psy6977 70 NNKLIQNAEYYYVSGFFLTVSPES---ILEVAKVALSCT---IRNI------NYLH----HRFI--Y--L-VLIDFEALA 128 (239)
Q Consensus 70 ~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~g---~~~~------p~~~----~~~~--~--~-~~n~~E~~~ 128 (239)
..+.+..++.+++. .. ....+. +..+++.+++.+ ++|+ +... ++++ . + +||..|+..
T Consensus 48 ~~~~~~~~~alvi~-~G-~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~~vItPN~~E~~~ 125 (263)
T PRK09355 48 AEEMAKIAGALVIN-IG-TLTEERIEAMLAAGKIANEAGKPVVLDPVGVGATSYRTEFALELLAEVKPAVIRGNASEIAA 125 (263)
T ss_pred HHHHHHhcCceEEe-CC-CCCHHHHHHHHHHHHHHHhcCCCEEECCcccCcchhhHHHHHHHHHhcCCcEecCCHHHHHH
Confidence 33667788888884 11 123332 444555566666 6665 1111 3443 1 2 999999999
Q ss_pred HHHHcCC--------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 129 FAKQQNF--------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 129 l~~~~~~--------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
|++.... +.++..+.++.+.++ +...|++| |... ++++++..+.++.... ...+.+|+||+
T Consensus 126 L~g~~~~~~~vd~~~~~~~~~~~a~~la~~------~~~~Vvvk-G~~d-~I~~~~~~~~~~~g~~---~~~~v~GtGc~ 194 (263)
T PRK09355 126 LAGEAAETKGVDSTDGSADAVEIAKAAAKK------YGTVVVVT-GEVD-YITDGERVVSVHNGHP---LMTKVTGTGCL 194 (263)
T ss_pred HhCCCcccCCcCCCCCHHHHHHHHHHHHHH------hCCEEEEE-CCCc-EEEeCCEEEEEeCCCc---ccCCcccccHH
Confidence 9985311 122566677777775 33467887 4444 3335555555552221 45555899999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+.|.+...+..|.++.+|+..|...-..+
T Consensus 195 L~~~iaa~lA~g~~~~~A~~~A~~~~~~a 223 (263)
T PRK09355 195 LSAVVAAFAAVEKDYLEAAAAACAVYGIA 223 (263)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999988777644433
|
|
| >KOG3009|consensus | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.2e-06 Score=70.63 Aligned_cols=147 Identities=18% Similarity=0.201 Sum_probs=95.6
Q ss_pred cceeEEEEeccccccChHHHHHHHHHhhhCC---CCCh---hhHHHHhhH--------HhcCHHHHHHHHHHc--CCC--
Q psy6977 75 QNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI---NYLHHRFIY--------LVLIDFEALAFAKQQ--NFQ-- 136 (239)
Q Consensus 75 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p~~~~~~~~--------~~~n~~E~~~l~~~~--~~~-- 136 (239)
..++++.++ .++++..+.++++ ++.+. .+++ +...+.++. +.||..|+....... .++
T Consensus 424 ~~a~~I~~D---sNiS~~~Ma~il~-ak~~k~~V~fEPTd~~k~~K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v~~nps 499 (614)
T KOG3009|consen 424 LSADFILLD---SNISVPVMARILE-AKKHKKQVWFEPTDIDKVKKVFKTLLVGAITAISPNANELLKAAKLCHVSVNPS 499 (614)
T ss_pred hcCCEEEEc---CCCCHHHHHHHHH-hhhccCceEecCCCchhhhhhhhhcceeeEEeeCCCHHHHHHHhhcCceeeChh
Confidence 389999995 4688888888888 66655 3444 222222222 289999984222211 111
Q ss_pred ----ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-----EEEEeccCCCCCCcccCCCCchhhhHHHHH
Q psy6977 137 ----TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGK-----TTEFPVQRLPAESVVDTNGAGDSFVGGFLS 207 (239)
Q Consensus 137 ----~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-----~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~ 207 (239)
.+...+.++....+.. .....+|+|.-.+|++....++ ....+++.. ..++++..||||+|.+||+.
T Consensus 500 ~~q~~~~~~~~~~~~~~k~~---~~~s~~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~-~~n~vsvsgaGdsf~~g~i~ 575 (614)
T KOG3009|consen 500 VIQTADGVLELIEKEKTKLL---LNTSIFIVTLANKGSLVVYRNKLGQLEFQSLPPPLQ-MNNVVSVSGAGDSFNSGVIA 575 (614)
T ss_pred hhccchHHHHHHHHHHHHhh---cccceEEEEeccCceEEEecCCCCCcccccCCCccc-ccceeEeccCCcccccceee
Confidence 1223344444433332 2456789999999988765542 333343332 35899999999999999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHH
Q psy6977 208 QLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 208 ~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+++++.++.+++.-+..++...
T Consensus 576 ~l~~~~~v~es~~gg~~~~ral 597 (614)
T KOG3009|consen 576 GLAHNKTVVESLQGGQECARAL 597 (614)
T ss_pred hhhcCcchHhhccccHHHHHHH
Confidence 9999999999999885555443
|
|
| >TIGR00694 thiM hydroxyethylthiazole kinase | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.8e-05 Score=61.98 Aligned_cols=143 Identities=11% Similarity=-0.036 Sum_probs=89.5
Q ss_pred hhhcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh-----h--hH---HHHhhH----H-hcCHHHHHH
Q psy6977 70 NNKLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI-----N--YL---HHRFIY----L-VLIDFEALA 128 (239)
Q Consensus 70 ~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~-----p--~~---~~~~~~----~-~~n~~E~~~ 128 (239)
..+.++.++.+++.--. ... +.+..+++.+++.+ ++|+ . .+ .++++. + .||..|++.
T Consensus 43 ~~~~~~~~~al~ik~G~--l~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~s~~r~~~~~~Ll~~~~~~vITpN~~E~~~ 120 (249)
T TIGR00694 43 VAELAKIAGALVINIGT--LDKESIEAMIAAGKSANELGVPVVLDPVGVGATKFRTETALELLSEGRFAAIRGNAGEIAS 120 (249)
T ss_pred HHHHHHHcCceEEeCCC--CCHHHHHHHHHHHHHHHhcCCCEEEcccccccchhHHHHHHHHHhhcCCceeCCCHHHHHH
Confidence 34667788888884111 222 34455566666555 6666 1 11 245652 2 999999999
Q ss_pred HHHHcC----C----CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 129 FAKQQN----F----QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 129 l~~~~~----~----~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
|++... . +.++..+.++.+.++. ++ .|++| |.... ++++++.+.+..... .....+|.||+
T Consensus 121 L~g~~~~~~gvd~~~~~~d~~~~a~~la~~~-----~~-~Vllk-G~~D~-i~~~~~~~~~~~g~~---~~~~~~GtGc~ 189 (249)
T TIGR00694 121 LAGETGLMKGVDSGEGAADAIRAAQQAAQKY-----GT-VVVIT-GEVDY-VSDGTSVYTIHNGTE---LLGKITGSGCL 189 (249)
T ss_pred HhCCCCCCCCcCCccchHHHHHHHHHHHHHh-----CC-EEEEE-CCCcE-EEeCCEEEEECCCCh---HHhCCccchHH
Confidence 998531 0 1235666777777752 33 67775 54444 445665555433221 12224799999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
+.+.+...+..|.++.+|+..|...
T Consensus 190 LssaIaa~LA~g~~~~~A~~~A~~~ 214 (249)
T TIGR00694 190 LGSVVAAFCAVEEDPLDAAISACLL 214 (249)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 9999999999999999999888643
|
This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE. |
| >KOG2598|consensus | Back alignment and domain information |
|---|
Probab=98.25 E-value=6.6e-05 Score=62.56 Aligned_cols=108 Identities=20% Similarity=0.239 Sum_probs=84.3
Q ss_pred HHhhHH---hcCHHHHHHHHHHcC------CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcE--------------
Q psy6977 114 HRFIYL---VLIDFEALAFAKQQN------FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPI-------------- 170 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~~~------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~-------------- 170 (239)
+++|++ .||..|+-.|.+... .+..++...+..++++ |+|+|+++.|.-..
T Consensus 148 ~l~P~adiltPNI~Ea~~Ll~~~~~~~~~i~~v~di~~~~~~ihk~------gpk~VlvkGghiP~~~~~~~s~d~~~~~ 221 (523)
T KOG2598|consen 148 ELLPFADILTPNIPEAFILLKKEKREISKIQSVFDIAKDAAKIHKL------GPKNVLVKGGHIPFNKNMMTSKDDSDKY 221 (523)
T ss_pred HhhhhHHHhCCChHHHHHHHhhcccCCcccccHHHHHHHHHHHHhc------CcceEEEeCCCcCccccccccCcccCCc
Confidence 778877 899999999988421 1335566677777875 99999998774221
Q ss_pred ---EEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q psy6977 171 ---ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 171 ---~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~ 230 (239)
+++.++++++++.+-+ ....+-|.|-++.++++.-|+.|.++.+|+..|..---.++
T Consensus 222 ~~DvlydG~~F~~f~~~~~---~t~~tHGtgCtLaSAIASnLA~g~sl~qAv~~ai~yvq~Ai 281 (523)
T KOG2598|consen 222 TVDVLYDGKEFYIFKSPYL---ATKHTHGTGCTLASAIASNLARGYSLLQAVQGAIEYVQNAI 281 (523)
T ss_pred eEEEEEecceEEEeccccc---ccccccCccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence 3556778888888887 78888999999999999999999999999988876444333
|
|
| >PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0045 Score=49.07 Aligned_cols=142 Identities=18% Similarity=0.128 Sum_probs=89.2
Q ss_pred hhcccceeEEEEeccccccChHHHHHHHHHhhhCC---CCChhhHH---HH----hhH-H-hcCHHHHHHHHHHcCCCcc
Q psy6977 71 NKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNINYLH---HR----FIY-L-VLIDFEALAFAKQQNFQTE 138 (239)
Q Consensus 71 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~p~~~---~~----~~~-~-~~n~~E~~~l~~~~~~~~~ 138 (239)
.+.+++++.+++. .-+....+. ..+++...+.. ++|...++ +. -.. + .|+.-|+..|++......+
T Consensus 62 ~~~~~~~~av~iG-PGlg~~~~~-~~~~~~~~~~~~p~VlDADaL~~l~~~~~~~~~~~IlTPH~gE~~rL~~~~~~~~~ 139 (242)
T PF01256_consen 62 LELLEKADAVVIG-PGLGRDEET-EELLEELLESDKPLVLDADALNLLAENPKKRNAPVILTPHPGEFARLLGKSVEIQE 139 (242)
T ss_dssp HHHHCH-SEEEE--TT-SSSHHH-HHHHHHHHHHCSTEEEECHHHHCHHHCCCCSSSCEEEE-BHHHHHHHHTTTCHHCC
T ss_pred HhhhccCCEEEee-cCCCCchhh-HHHHHHHHhhcceEEEehHHHHHHHhccccCCCCEEECCCHHHHHHHhCCcccchh
Confidence 3567899999994 233333332 23343333333 66663332 21 111 1 8999999999987433346
Q ss_pred CHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHH
Q psy6977 139 DLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVC 218 (239)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a 218 (239)
+..+.++.+.+.. +.+|+-.|..-.++..+++.+..+... .-.-+-|.||.++|-+..-+.++.++.+|
T Consensus 140 ~~~~~a~~~a~~~-------~~~vvLKG~~t~I~~p~~~~~~n~~gn----~~la~gGsGDvLaGii~~llaq~~~~~~A 208 (242)
T PF01256_consen 140 DRIEAAREFAKEY-------GAVVVLKGAVTIIASPGGRVYVNPTGN----PGLATGGSGDVLAGIIAGLLAQGYDPFEA 208 (242)
T ss_dssp SHHHHHHHHHHHH-------TSEEEEESTSSEEEEETSEEEEE--------GGGSSTTHHHHHHHHHHHHHHHTSSHHHH
T ss_pred hHHHHHHHHHhhc-------CcEEEEeCCCcEEEecCcceeEeCCCC----CCCCCCCcccHHHHHHHHHHHccCCHHHH
Confidence 6777888777752 346666788887776677766655443 45566799999998888888999999999
Q ss_pred HHHHHHH
Q psy6977 219 IECGVWA 225 (239)
Q Consensus 219 ~~~a~~~ 225 (239)
...|+..
T Consensus 209 a~~av~l 215 (242)
T PF01256_consen 209 ACLAVYL 215 (242)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888764
|
Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A .... |
| >PRK10565 putative carbohydrate kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.026 Score=49.79 Aligned_cols=140 Identities=12% Similarity=0.002 Sum_probs=81.0
Q ss_pred hcccceeEEEEeccccccChHHHHHHHHHhhhCC---CCChhhH---HHHh----hHH-hcCHHHHHHHHHHcCCCc-cC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNINYL---HHRF----IYL-VLIDFEALAFAKQQNFQT-ED 139 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~p~~---~~~~----~~~-~~n~~E~~~l~~~~~~~~-~~ 139 (239)
+.++.++.+++.. -...+ +....+++.+++.+ ++|...+ .+.. +.+ .||.-|++.|++...... .+
T Consensus 316 ~~~~~~~a~viGp-Glg~~-~~~~~~~~~~~~~~~P~VLDAdaL~ll~~~~~~~~~~VLTPh~gE~~rL~~~~~~~v~~~ 393 (508)
T PRK10565 316 ESLEWADVVVIGP-GLGQQ-EWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESD 393 (508)
T ss_pred HHhhcCCEEEEeC-CCCCC-HHHHHHHHHHHhcCCCEEEEchHHHHHhhCccccCCeEECCCHHHHHHHhCCChhhhhhh
Confidence 4456788888842 22222 33345556665544 6666222 1110 123 999999999997421111 23
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHH
Q psy6977 140 LHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219 (239)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~ 219 (239)
..+.++.+.++. + ..||+ -|..-.+.-.++..+..+. .- .-.-+.|.||.++|.+.+-+.++.++.+|.
T Consensus 394 ~~~~a~~~a~~~-----~-~~vvl-KG~~~iI~~~~~~~~~~~~-G~---~~ma~~GsGDvLaGiIaalla~g~~~~~Aa 462 (508)
T PRK10565 394 RLLSARRLVKRY-----G-GVVVL-KGAGTVIAAEPDALAIIDV-GN---AGMASGGMGDVLSGIIGALLGQKLSPYDAA 462 (508)
T ss_pred HHHHHHHHHHHh-----C-CEEEE-eCCCcEEEcCCceEEEECC-CC---CCCCCCChHHHHHHHHHHHHHcCCCHHHHH
Confidence 445566666642 2 24444 5665544422344444332 22 345569999999998888888898998888
Q ss_pred HHHHH
Q psy6977 220 ECGVW 224 (239)
Q Consensus 220 ~~a~~ 224 (239)
..|+.
T Consensus 463 ~~a~~ 467 (508)
T PRK10565 463 CAGCV 467 (508)
T ss_pred HHHHH
Confidence 77764
|
|
| >COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.34 Score=38.41 Aligned_cols=139 Identities=12% Similarity=0.036 Sum_probs=84.9
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh------hhHH----HHhhHH-----hcCHHHHHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI------NYLH----HRFIYL-----VLIDFEALAFA 130 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~------p~~~----~~~~~~-----~~n~~E~~~l~ 130 (239)
+..+-++.++++ ...++. +.+..+.+.+.+.| ++|+ ++.. +++.+. ..|..|...|.
T Consensus 51 e~~kia~AL~IN--IGTL~~~~~~~m~~A~~~An~~~~PvvLDPVgvgAt~~R~~~~~~LL~~~~~~~IrGN~sEI~~La 128 (265)
T COG2145 51 EFAKIADALLIN--IGTLSAERIQAMRAAIKAANESGKPVVLDPVGVGATKFRTKFALELLAEVKPAAIRGNASEIAALA 128 (265)
T ss_pred HHHHhccceEEe--eccCChHHHHHHHHHHHHHHhcCCCEEecCccCCchHHHHHHHHHHHHhcCCcEEeccHHHHHHHh
Confidence 566777777775 222333 55666777777777 7887 2222 666654 89999999999
Q ss_pred HHcC--------CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhh
Q psy6977 131 KQQN--------FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFV 202 (239)
Q Consensus 131 ~~~~--------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ 202 (239)
|... ....++.++++.+.+.. +.+++-.|+..++. ++.+.+.+....- -.-.-||+|+...
T Consensus 129 g~~~~~kGVDa~~~~~~~~~~a~~~A~~~-------~~vvvvTG~vD~Is-dg~~~~~i~nG~p---ll~~ItGtGCllg 197 (265)
T COG2145 129 GEAGGGKGVDAGDGAADAIEAAKKAAQKY-------GTVVVVTGEVDYIS-DGTRVVVIHNGSP---LLGKITGTGCLLG 197 (265)
T ss_pred cccccccccccccchhhHHHHHHHHHHHh-------CcEEEEECCeeEEE-cCCeEEEEECCCc---HHhhhhccccHHH
Confidence 7531 12344566676666642 35666667777655 4444444443321 2334489999887
Q ss_pred HHHHHHHHcCCC-HHHHHHHHH
Q psy6977 203 GGFLSQLIKGEP-LSVCIECGV 223 (239)
Q Consensus 203 ag~~~~l~~g~~-~~~a~~~a~ 223 (239)
|.....+.-..+ ..+|...|+
T Consensus 198 av~aaF~av~~d~~~~A~~~A~ 219 (265)
T COG2145 198 AVVAAFLAVEKDPLLDAAAEAC 219 (265)
T ss_pred HHHHHHHhcCCCHHHHHHHHHH
Confidence 777666666666 455555443
|
|
| >PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.24 Score=39.23 Aligned_cols=139 Identities=14% Similarity=0.095 Sum_probs=86.4
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh------hhHH----HHhhHH-----hcCHHHHHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI------NYLH----HRFIYL-----VLIDFEALAFA 130 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~------p~~~----~~~~~~-----~~n~~E~~~l~ 130 (239)
+..+.++.++++ ...+++ +.+..+.+.+.+.+ ++|+ ++.. +++... +.|..|...|.
T Consensus 45 e~~~~a~al~iN--iGTl~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGas~~R~~~~~~LL~~~~~~vIrGN~sEI~aLa 122 (246)
T PF02110_consen 45 EFASIADALVIN--IGTLTDERIEAMKKAAKAANELGIPVVLDPVGVGASKFRTEFALELLNNYKPTVIRGNASEIAALA 122 (246)
T ss_dssp HHHHCTSEEEEE--STTSSHHHHHHHHHHHHHHHHTT--EEEE-TTBTTBHHHHHHHHHHHCHS--SEEEEEHHHHHHHH
T ss_pred HHHHHcCEEEEE--CCCCCHhHHHHHHHHHHHHHHcCCCEEEeCcccCCcHHHHHHHHHHHHhCCCcEEEeCHHHHHHHh
Confidence 666778888885 223344 55667777777777 7787 2222 555332 89999999999
Q ss_pred HHcCC--------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhh
Q psy6977 131 KQQNF--------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFV 202 (239)
Q Consensus 131 ~~~~~--------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ 202 (239)
+.... ...+..+.++.+.++. +.+|+-.|+...+. ++...+.++.-.- -.-.-||.|+...
T Consensus 123 g~~~~~kGVDs~~~~~~~~~~a~~lA~k~-------~~vVvvTG~~D~Is-dg~~~~~i~nG~~---~l~~itGtGC~lg 191 (246)
T PF02110_consen 123 GEDSKAKGVDSGDSDEDAIEAAKQLAQKY-------NCVVVVTGEVDYIS-DGNRVYRIPNGSP---LLSKITGTGCMLG 191 (246)
T ss_dssp TCCCCSCSSSSSCGSHHHHHHHHHHHHHT-------TSEEEEESSSEEEE-ESSCEEEECSSSG---GGGGSTTHHHHHH
T ss_pred CcCCCCCCcCcCCcchHHHHHHHHHHHhc-------CCEEEEecCCcEEE-CCCeEEEeCCCCh---HhcceeccchHHH
Confidence 86421 1122457778887753 34666668877764 5555555554432 3445599999877
Q ss_pred HHHHHHHHcCCCHHHHHHHHH
Q psy6977 203 GGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 203 ag~~~~l~~g~~~~~a~~~a~ 223 (239)
+-+.+.+.-..+..++...|.
T Consensus 192 aliaaf~av~~d~~~aa~~a~ 212 (246)
T PF02110_consen 192 ALIAAFLAVAEDPLEAAVAAV 212 (246)
T ss_dssp HHHHHHHCCCSSHHHHHHHHH
T ss_pred HHHHHHHhccccchHHHHHHH
Confidence 766666666566655554443
|
Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: |
| >PRK03979 ADP-specific phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.48 Score=41.03 Aligned_cols=30 Identities=23% Similarity=0.388 Sum_probs=22.2
Q ss_pred EEeccCCCCCCcccCCCCchhhhHHHHHHHHc
Q psy6977 180 EFPVQRLPAESVVDTNGAGDSFVGGFLSQLIK 211 (239)
Q Consensus 180 ~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~ 211 (239)
.+|+.-+ ++.+.|+|-||+|+||...++..
T Consensus 426 ~iPt~~v--~~P~sTVGLGDtisagaF~~~~~ 455 (463)
T PRK03979 426 LIPSRLV--ENPKSTVGLGDTISAGAFVSYLS 455 (463)
T ss_pred Eeccccc--CCCcceeccCcccchhHHHHHHH
Confidence 3444444 47888999999999988777643
|
|
| >KOG3974|consensus | Back alignment and domain information |
|---|
Probab=94.63 E-value=1.3 Score=35.13 Aligned_cols=149 Identities=13% Similarity=0.121 Sum_probs=84.8
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCChhhHH------H-Hhh---HH--hcCHHHHHHHHHHc
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNINYLH------H-RFI---YL--VLIDFEALAFAKQQ 133 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~p~~~------~-~~~---~~--~~n~~E~~~l~~~~ 133 (239)
+++.+-+++++. ..+..++ ..+..++++++..+ ++|..-+| + ++. .+ .||.-|...|++..
T Consensus 97 k~L~RlhavVIG-PGLGRdp~~~k~i~~iley~~~~dvP~VIDaDGL~Lv~q~~e~l~~~~~~viLTPNvvEFkRLcd~~ 175 (306)
T KOG3974|consen 97 KLLQRLHAVVIG-PGLGRDPAILKEIAKILEYLRGKDVPLVIDADGLWLVEQLPERLIGGYPKVILTPNVVEFKRLCDAE 175 (306)
T ss_pred HHHhheeEEEEC-CCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCceEehhhchhhhhccCceeeeCCcHHHHHHHHHHh
Confidence 578888899984 3444454 45677788888776 45542222 1 221 12 89999999999974
Q ss_pred CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHH----
Q psy6977 134 NFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQL---- 209 (239)
Q Consensus 134 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l---- 209 (239)
..+.+...++ ..|.... ....|+-.|+...++..+++....+ .+- ...-.=|=||..++.+..-+
T Consensus 176 l~~~d~~~~~-~~L~~~l------~nv~vvqKG~~D~ils~~~ev~~~s-~eG---s~kRcGGQGDiLaGsla~fl~w~k 244 (306)
T KOG3974|consen 176 LDKVDSHSQM-QHLAAEL------MNVTVVQKGESDKILSPDSEVRVCS-TEG---SLKRCGGQGDILAGSLATFLSWAK 244 (306)
T ss_pred hccccchHHH-HHHHHHh------cCeEEEEecCCceeeCCCCeeEEcc-CCC---CccccCCCcchhhhHHHHHHHHHH
Confidence 3333333333 3333321 2467777888888665555544333 333 22223578999988664443
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 210 IKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 210 ~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
+......++...|..+++..+..
T Consensus 245 ~~~~e~~~~~~~a~~a~s~~vr~ 267 (306)
T KOG3974|consen 245 LLSGEQDSAAFLAAVAGSIMVRR 267 (306)
T ss_pred hccCCccchhhhhhhhhHHHHHH
Confidence 22334445566665555555444
|
|
| >PRK14039 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=92.26 E-value=5 Score=34.87 Aligned_cols=22 Identities=36% Similarity=0.585 Sum_probs=17.9
Q ss_pred CCcccCCCCchhhhHHHHHHHH
Q psy6977 189 ESVVDTNGAGDSFVGGFLSQLI 210 (239)
Q Consensus 189 ~~vvdt~GaGDaf~ag~~~~l~ 210 (239)
++.+.|+|-||+++||-..+++
T Consensus 426 ~~P~sTVGlGDtisa~af~~~l 447 (453)
T PRK14039 426 KSPVTTVGLGDTLTAGTFLRLL 447 (453)
T ss_pred cCCccccccCccccHHHHHHHH
Confidence 4788999999999987666654
|
|
| >COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.89 E-value=1.3 Score=35.99 Aligned_cols=127 Identities=17% Similarity=0.149 Sum_probs=69.2
Q ss_pred cccceeEEEEeccccccChH---HHHHHHHHhhhCC-CCChhh---HH---HHh---hHH-hcCHHHHHHHHHHcC-CCc
Q psy6977 73 LIQNAEYYYVSGFFLTVSPE---SILEVAKVALSCT-IRNINY---LH---HRF---IYL-VLIDFEALAFAKQQN-FQT 137 (239)
Q Consensus 73 ~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~g-~~~~p~---~~---~~~---~~~-~~n~~E~~~l~~~~~-~~~ 137 (239)
.....+.++++ .-+-...+ .+.++++... .. ++|... +. ... ..+ .|+.-|++.|++... ...
T Consensus 98 ~~~~~~avviG-pGlG~~~~~~~~~~~~l~~~~-~p~ViDADaL~~la~~~~~~~~~~~VlTPH~gEf~rL~g~~~~~~~ 175 (284)
T COG0063 98 LVERADAVVIG-PGLGRDAEGQEALKELLSSDL-KPLVLDADALNLLAELPDLLDERKVVLTPHPGEFARLLGTEVDEIE 175 (284)
T ss_pred hhccCCEEEEC-CCCCCCHHHHHHHHHHHhccC-CCEEEeCcHHHHHHhCcccccCCcEEECCCHHHHHHhcCCcccccc
Confidence 44678888884 22334443 3333333332 23 455411 11 221 122 899999999998422 122
Q ss_pred cCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC
Q psy6977 138 EDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG 212 (239)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g 212 (239)
.+..+.++.+.++ .+.+||-.|..-++...+++.+..+.-. .-.=+=|.||..++-+..-|.++
T Consensus 176 ~~r~~~a~~~a~~-------~~~vvVLKG~~tvI~~~~g~~~~n~~G~----~~ma~GGtGDvLaGii~alLAq~ 239 (284)
T COG0063 176 VDRLEAARELAAK-------YGAVVVLKGAVTVIADPDGEVFVNPTGN----PGMATGGTGDVLAGIIGALLAQG 239 (284)
T ss_pred cchHHHHHHHHHH-------cCCEEEEeCCCCEEEcCCCcEEEcCCCC----HHhccCcchHHHHHHHHHHHhCC
Confidence 3445666666664 3456666777777775343443322221 22233479999877666666676
|
|
| >PRK14038 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=91.79 E-value=2.8 Score=36.37 Aligned_cols=62 Identities=13% Similarity=0.035 Sum_probs=34.2
Q ss_pred hcccceeEEEEeccccccC---hHHHHHHHHHhhh---CC---------CCCh---hhHHHHhhHH---hcCHHHHHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTVS---PESILEVAKVALS---CT---------IRNI---NYLHHRFIYL---VLIDFEALAFA 130 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~---~g---------~~~~---p~~~~~~~~~---~~n~~E~~~l~ 130 (239)
++..++|.+++||++.-.. .+...++.+..+. .+ ..|. ..+.+++|++ -+|++|+..+.
T Consensus 220 ei~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~l~~~~i~iH~EfAs~~d~~~r~~i~~ilp~vDSlGmNE~ELa~ll 299 (453)
T PRK14038 220 EIAKKAELAIISGLQALTEENYREPFETVREHLKVLNERGIPAHLEFAFTPDETVREEILGLLGKFYSVGLNEVELASIM 299 (453)
T ss_pred hhccCCCEEEEEchhhhccccHHHHHHHHHHHHHhcCcCCceEEEEeeccchHHHHHHHHhhCccccccccCHHHHHHHH
Confidence 5567899999999875321 1222233332222 12 1111 1112556665 59999999888
Q ss_pred HHc
Q psy6977 131 KQQ 133 (239)
Q Consensus 131 ~~~ 133 (239)
...
T Consensus 300 ~~l 302 (453)
T PRK14038 300 EVM 302 (453)
T ss_pred HHh
Confidence 743
|
|
| >TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase | Back alignment and domain information |
|---|
Probab=91.40 E-value=5.4 Score=34.58 Aligned_cols=21 Identities=29% Similarity=0.389 Sum_probs=16.6
Q ss_pred CCcccCCCCchhhhHHHHHHH
Q psy6977 189 ESVVDTNGAGDSFVGGFLSQL 209 (239)
Q Consensus 189 ~~vvdt~GaGDaf~ag~~~~l 209 (239)
++.+.|+|-||+|+||-..++
T Consensus 419 ~~P~sTVGLGDtissgaF~~~ 439 (446)
T TIGR02045 419 ENPKSTVGLGDTISTGAFVSY 439 (446)
T ss_pred CCCcceeccCcccchhHHHHH
Confidence 478889999999988655544
|
Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 239 | ||||
| 3loo_A | 365 | Crystal Structure Of Anopheles Gambiae Adenosine Ki | 2e-63 | ||
| 1bx4_A | 345 | Structure Of Human Adenosine Kinase At 1.50 Angstro | 5e-48 | ||
| 2xtb_A | 347 | Crystal Structure Of Trypanosoma Brucei Rhodesiense | 7e-29 | ||
| 3vaq_A | 372 | Adenosine Kinase From Schistosoma Mansoni In Comple | 7e-26 | ||
| 3uq6_A | 372 | Adenosine Kinase From Schistosoma Mansoni In Comple | 8e-26 | ||
| 3vas_A | 370 | Adenosine Kinase From Schistosoma Mansoni In Comple | 9e-26 | ||
| 1lii_A | 363 | Structure Of T. Gondii Adenosine Kinase Bound To Ad | 3e-21 | ||
| 1lio_A | 363 | Structure Of Apo T. Gondii Adenosine Kinase Length | 8e-21 | ||
| 2abs_A | 383 | Crystal Structure Of T. Gondii Adenosine Kinase Com | 3e-20 | ||
| 1dgm_A | 363 | Crystal Structure Of Adenosine Kinase From Toxoplas | 1e-19 | ||
| 2c49_A | 302 | Crystal Structure Of Methanocaldococcus Jannaschii | 7e-08 | ||
| 4e3a_A | 352 | Crystal Structure Of Probable Sugar Kinase Protein | 3e-07 | ||
| 3lhx_A | 319 | Crystal Structure Of A Ketodeoxygluconokinase (Kdgk | 5e-05 | ||
| 4du5_A | 336 | Crystal Structure Of Pfkb Protein From Polaromonas | 2e-04 | ||
| 3ubo_A | 354 | The Crystal Structure Of Adenosine Kinase From Sino | 7e-04 |
| >pdb|3LOO|A Chain A, Crystal Structure Of Anopheles Gambiae Adenosine Kinase In Complex With P1,P4-Di(Adenosine-5) Tetraphosphate Length = 365 | Back alignment and structure |
|
| >pdb|1BX4|A Chain A, Structure Of Human Adenosine Kinase At 1.50 Angstroms Length = 345 | Back alignment and structure |
|
| >pdb|2XTB|A Chain A, Crystal Structure Of Trypanosoma Brucei Rhodesiense Adenosine Kinase Complexed With Activator Length = 347 | Back alignment and structure |
|
| >pdb|3VAQ|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine Length = 372 | Back alignment and structure |
|
| >pdb|3UQ6|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine And Amp Length = 372 | Back alignment and structure |
|
| >pdb|3VAS|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine In Occluded Loop Conformation Length = 370 | Back alignment and structure |
|
| >pdb|1LII|A Chain A, Structure Of T. Gondii Adenosine Kinase Bound To Adenosine 2 And Amp-Pcp Length = 363 | Back alignment and structure |
|
| >pdb|1LIO|A Chain A, Structure Of Apo T. Gondii Adenosine Kinase Length = 363 | Back alignment and structure |
|
| >pdb|2ABS|A Chain A, Crystal Structure Of T. Gondii Adenosine Kinase Complexed With Amp-Pcp Length = 383 | Back alignment and structure |
|
| >pdb|1DGM|A Chain A, Crystal Structure Of Adenosine Kinase From Toxoplasma Gondii Length = 363 | Back alignment and structure |
|
| >pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Nucleoside Kinase - An Archaeal Member Of The Ribokinase Family Length = 302 | Back alignment and structure |
|
| >pdb|4E3A|A Chain A, Crystal Structure Of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Length = 352 | Back alignment and structure |
|
| >pdb|3LHX|A Chain A, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From Shigella Flexneri Length = 319 | Back alignment and structure |
|
| >pdb|4DU5|A Chain A, Crystal Structure Of Pfkb Protein From Polaromonas Sp. Js666 Length = 336 | Back alignment and structure |
|
| >pdb|3UBO|A Chain A, The Crystal Structure Of Adenosine Kinase From Sinorhizobium Meliloti Length = 354 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 239 | |||
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 6e-84 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 6e-83 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 5e-82 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 2e-69 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 1e-28 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 7e-22 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 1e-20 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 1e-20 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 1e-19 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 5e-19 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 1e-17 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 2e-17 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 3e-17 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 1e-16 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 3e-16 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 4e-16 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 5e-16 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 5e-16 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 3e-15 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 4e-15 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 6e-15 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 1e-14 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 2e-14 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 3e-14 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 4e-14 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 9e-14 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 4e-13 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 7e-13 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 1e-12 | |
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 4e-12 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 7e-12 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 1e-11 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 9e-11 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 6e-10 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 1e-09 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 1e-08 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 5e-08 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 1e-07 |
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 | Back alignment and structure |
|---|
Score = 253 bits (648), Expect = 6e-84
Identities = 121/255 (47%), Positives = 161/255 (63%), Gaps = 20/255 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G VG+D Y+ ILE +A+ G+ V+YQ T PTGTCAVL+T RSL ANLAAAN F
Sbjct: 103 FGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVTG--TQRSLCANLAAANDF 160
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVA--------KVALSCTIRNINYL 112
TP+HL N +Q A+++YVSGFF TVS ES L VA ++ + +
Sbjct: 161 TPEHLRSDGNRAYLQGAQFFYVSGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQF 220
Query: 113 HHRFIYLVL--IDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
+ + + +D EA+A AK+ N+ TEDL I +I+ LPK+N R+RI IIT
Sbjct: 221 YKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKRIAALPKENGKRKRIVIIT 280
Query: 165 QGDKPIILSQNG--KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222
QG P++L + G EFPVQ+L E +VDTNGAGD+FVGGFL+QL++ + VCI+CG
Sbjct: 281 QGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCG 340
Query: 223 VWAAQHIIQVSGCTL 237
+WAA+ IIQ SGCT
Sbjct: 341 IWAAREIIQRSGCTF 355
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 | Back alignment and structure |
|---|
Score = 250 bits (640), Expect = 6e-83
Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 26/257 (10%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
+G + D Y +L+ A G+V+ +H +G CAV IT K R+LVA+L AAN
Sbjct: 89 VGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCITG--KERTLVADLGAANHL 146
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVA----------LS---CTIR 107
+ +H+ P + + + +Y SGF LTV +L+ + A LS
Sbjct: 147 SSEHMRSPAVVRAMDESRIFYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFI--- 203
Query: 108 NINYLHHRFIYLV-LIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERI 160
+ + + ++ D EA FA + T+ + IA + + + R+
Sbjct: 204 -MQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIARRAVSEVPYTGTKGRV 262
Query: 161 TIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIE 220
+ T+ + +L+ PV +L + V+D NGAGD+F+GGFLS G+ L C E
Sbjct: 263 VVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCE 322
Query: 221 CGVWAAQHIIQVSGCTL 237
G + AQ +IQ GC+
Sbjct: 323 TGHYTAQEVIQRDGCSF 339
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 | Back alignment and structure |
|---|
Score = 248 bits (634), Expect = 5e-82
Identities = 104/254 (40%), Positives = 149/254 (58%), Gaps = 19/254 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G +G D + +IL+ KA+E + Y + +PTGTCA IT G RSL+ANLAAAN +
Sbjct: 87 FGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT--GDNRSLIANLAAANCY 144
Query: 61 -TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVA--------KVALSCTIRNINY 111
HL + +N L++ A Y++GFFLTVSPES+L+VA L+ + I+
Sbjct: 145 KKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQ 204
Query: 112 LHH-RFIYLV-LIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
+ + ++ +D EA FA++Q F+T+D+ IA K LPK N R+RI I
Sbjct: 205 FYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIF 264
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
TQG I++ + T F V + ++DTNGAGD+FVGGFLSQL+ +PL+ CI G
Sbjct: 265 TQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGH 324
Query: 224 WAAQHIIQVSGCTL 237
+AA II+ +GCT
Sbjct: 325 YAASIIIRRTGCTF 338
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 | Back alignment and structure |
|---|
Score = 217 bits (554), Expect = 2e-69
Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 41/272 (15%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
MGA+G D +L+ + GL ++ + TG CAVLI + K R+L +L A F
Sbjct: 111 MGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINE--KERTLCTHLGACGSF 168
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVA---------KVALSCTIRNINY 111
A +Y + + LT +P++ LEVA L+ +
Sbjct: 169 RLPED----WTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVE 224
Query: 112 LHHRFIYLVL--IDF------EALAFAKQQNFQTEDLHAIALKISN-------------L 150
L+ + +L + E AK N + A++
Sbjct: 225 LYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLT 284
Query: 151 PKQNPNRERITIITQGDKPIILSQNGKT-----TEFPVQRLPAESVVDTNGAGDSFVGGF 205
QN + ++ ++T+G P+I ++ E V + AE +VDTNGAGD+FVGGF
Sbjct: 285 AGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGF 344
Query: 206 LSQLIKGEPLSVCIECGVWAAQHIIQVSGCTL 237
L L +G+ + CI CG AQ +IQ G +L
Sbjct: 345 LYALSQGKTVKQCIMCGNACAQDVIQHVGFSL 376
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 1e-28
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 48/258 (18%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQ-HHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G V D DI G+ + + PT + +T++G+ RS+ L A
Sbjct: 101 GNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGE-RSMNTYLGACVEL 159
Query: 61 TPDHLHVPENNKLIQNAEYYYVSG--FFLTVSPESILEVA--------KVALS-----CT 105
P+ + ++ +A+ Y G + + E+IL+ A +++++ C
Sbjct: 160 GPEDV----EADVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFC- 214
Query: 106 IRNINYLHHRFIYLVL---IDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPN 156
++ F+ L+ +D EAL+ +QT+D +I+ K
Sbjct: 215 ---VDRYRGEFLDLMRSGKVDIVFANRQEALSL-----YQTDDFEEALNRIAADCK---- 262
Query: 157 RERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLS 216
I +T + ++ + + VVDT GAGD F GFL +G L
Sbjct: 263 ---IAAVTMSENGAVILKGRERYYVNAI--RIREVVDTTGAGDLFASGFLYGYTQGRSLE 317
Query: 217 VCIECGVWAAQHIIQVSG 234
C + G AA +IQ G
Sbjct: 318 DCGKLGCLAAGIVIQQIG 335
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 7e-22
Identities = 35/250 (14%), Positives = 77/250 (30%), Gaps = 32/250 (12%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTE-PTGTCAVLITDNGKARSLVANLAAANL 59
MG++ + +D + + + ++Y T V+I + +R+++ +
Sbjct: 74 MGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPD 133
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEV----AKVALSCTIR---NINYL 112
+ + ++ ++ G + + + + + IR +
Sbjct: 134 VSATDFE----KVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP 189
Query: 113 HHRFIYLV-LIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
L D A Q E L + ++ + +
Sbjct: 190 REELFQLFGYGDVVFVSKDVAKHLGFQSAE--EALRGLYGRVRKGA--------VLVCAW 239
Query: 166 GDKP-IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
++ L +GK P VVDT GAGD+F + L +G + + G
Sbjct: 240 AEEGADALGPDGKLLHSDAF--PPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQ 297
Query: 225 AAQHIIQVSG 234
A + G
Sbjct: 298 VAGKKCGLQG 307
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 1e-20
Identities = 44/261 (16%), Positives = 84/261 (32%), Gaps = 39/261 (14%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLV--ANLAAA 57
+ A+G D++S + + Q + G + G R+ N AAA
Sbjct: 53 VTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTG-ERTFYYWRNEAAA 111
Query: 58 NLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRN-------IN 110
+ + + N +Y Y+SG L + + E L N
Sbjct: 112 KFWLASEQS-AAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNN 170
Query: 111 YLHH--------RFIY--------LVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQN 154
Y + +Y + + + + + + + +
Sbjct: 171 YRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDAL----WGQQPVEDVIAR---THNAG 223
Query: 155 PNRERITIITQGDKP-IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213
+ ++ +G ++ + P +LP E V+DT AGDSF G+L+ + G
Sbjct: 224 V---KEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGG 280
Query: 214 PLSVCIECGVWAAQHIIQVSG 234
+ G A +IQ G
Sbjct: 281 SAENAAKRGHLTASTVIQYRG 301
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 1e-20
Identities = 56/266 (21%), Positives = 81/266 (30%), Gaps = 45/266 (16%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARS---LVANLAA 56
A+G D S + + S G+ + G LIT RS AA
Sbjct: 72 FSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGL--YLITLEQGERSFAYWRGQSAA 129
Query: 57 ANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRN-------I 109
L + A+ Y SG L + + AL+
Sbjct: 130 RELAGDADA----LAAAMARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDP 185
Query: 110 NY---L-----HHRFIY--------LVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQ 153
N L + L FE A F A A + +
Sbjct: 186 NLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAW----FGDAGPDATADR---YARA 238
Query: 154 NPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213
R ++ G + Q+G+ PV P VVDT AGDSF G L ++ G+
Sbjct: 239 GV---RSVVVKNGPHAVHFLQDGRRGRVPV--PPVAQVVDTTAAGDSFNAGLLDSVLAGQ 293
Query: 214 PLSVCIECGVWAAQHIIQVSGCTLGL 239
PL I A ++Q G + +
Sbjct: 294 PLETAIAAAAALAGQVVQGKGALVEV 319
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 1e-19
Identities = 51/253 (20%), Positives = 84/253 (33%), Gaps = 33/253 (13%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKAR-SLVANLAAANL 59
+ AVG D D + E L + + D PTGT V + D G + +A N+
Sbjct: 44 VSAVGNDELGDEIMEVFKEKQLKNQIERVD-YPTGTVQVTLDDEGVPCYEIKEGVAWDNI 102
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP-----ESILEVAKVALSCTIR-NINY-- 111
D L +L N L+ +IN
Sbjct: 103 PFTDEL-----KRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQ 157
Query: 112 ------LHHRFIYLVLI----DFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERIT 161
+ I D E + ++ + DL + L K N ++
Sbjct: 158 DFYTKEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWIL--LAKYNL---KML 212
Query: 162 IITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIEC 221
I+T G + G + ++P V DT GAGDSF F + ++ G+ + +
Sbjct: 213 ILTCGINGSYVFTPGVVSFQETPKVP---VADTVGAGDSFTAAFCASILNGKSVPEAHKL 269
Query: 222 GVWAAQHIIQVSG 234
V + ++ SG
Sbjct: 270 AVEVSAYVCTQSG 282
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 5e-19
Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 46/248 (18%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
+ G D +++ A + G+ T + ++ +G +A++ LF
Sbjct: 59 IAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLF 118
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLT---VSPESILEVAKVALSCTIRNINYLHHRFI 117
TP L V + I + F L + +++ + +A +C
Sbjct: 119 TPRRLKVRAVREAIIAS------DFLLCDANLPEDTLTALGLIARACEKPLA-----AIA 167
Query: 118 -----------YLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERI 160
L ID EA A + E++ +
Sbjct: 168 ISPAKAVKLKAALGDIDILFMNEAEARALTGE---TAENVRDWPNILRKAGLSG------ 218
Query: 161 TIITQGDKPIILSQNGKTTEFPVQRLPAESV--VDTNGAGDSFVGGFLSQLIKGEPLSVC 218
++T+G ++ + P D GAGD+ G+L+ + +G+ +
Sbjct: 219 GVVTRGASEVVAFNGTEKAILH----PPLIREVKDVTGAGDAMASGYLAAIAEGKTIREA 274
Query: 219 IECGVWAA 226
+ G AA
Sbjct: 275 LRQGAAAA 282
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 1e-17
Identities = 43/258 (16%), Positives = 88/258 (34%), Gaps = 47/258 (18%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAANL 59
M +GKD + + + ++ + + T L+T++G+ + +
Sbjct: 63 MSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWK 122
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLT--VSPESILEVAKVA---------------L 102
D + + A+ ++ F + + +++ E+ A L
Sbjct: 123 LNIDDV----DFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRL 178
Query: 103 SCTIRNINYLHHRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPN 156
+ T+ +I L +D+ EA E L IA
Sbjct: 179 NETLDDICEA------LSYVDYLFPNFAEAKLL-----TGKETLDEIADC---FLACGV- 223
Query: 157 RERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLS 216
+ +I G + + T + P + + +DT GAGD+F GF++ L++G+ L
Sbjct: 224 --KTVVIKTGKDGCFIKRGDMTMKVPA--VAGITAIDTIGAGDNFASGFIAALLEGKNLR 279
Query: 217 VCIECGVWAAQHIIQVSG 234
C A + G
Sbjct: 280 ECARFANATAAISVLSVG 297
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 2e-17
Identities = 34/243 (13%), Positives = 73/243 (30%), Gaps = 37/243 (15%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAANL 59
M +G D + + + + G + + T T ++ +NG+ S +A++ +
Sbjct: 62 MSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGA 121
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLT---VSPESILEVAKVALSCTI-------RNI 109
D + ++ +NAEY + +
Sbjct: 122 MNTDFID--SKREIFENAEY------TVLDSDNPEIMEYLLKNFKDKTNFILDPVSAEKA 173
Query: 110 NYLHHRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
+++ H + EA A T+DL + L + I
Sbjct: 174 SWVKH---LIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKK------VFI 224
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
+ I + + + + GAGDSFV G + P+ ++ +
Sbjct: 225 SLDADGIFYNDGVSCGKIKATEVDV---KNVTGAGDSFVAGLGYGYMNKMPIEDIVKFAM 281
Query: 224 WAA 226
+
Sbjct: 282 TMS 284
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 3e-17
Identities = 46/255 (18%), Positives = 85/255 (33%), Gaps = 53/255 (20%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAANL 59
+ VG D + E + + + + E T + + + AA
Sbjct: 62 LSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDN-NQITFFLWGAAKH 120
Query: 60 FTP--------DHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNIN- 110
+ + +H+ + PE L+ AK A + + +
Sbjct: 121 YKELNPPNFNTEIVHIATGD-------------------PEFNLKCAKKAYGNNLVSFDP 161
Query: 111 -YLHHRFIYLVLIDFEALA---------FAKQQNFQTEDLHAIALKISNLPKQNPNRERI 160
++ +L++ F + N ++ ++ L
Sbjct: 162 GQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLNFEIDDYLERVDAL---------- 211
Query: 161 TIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIE 220
I+T+G K ++ K E P + A V+D GAGDS+ GFLS +KG L C
Sbjct: 212 -IVTKGSKGSVIYTKDKKIEIPC--IKAGKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGL 268
Query: 221 CGVWAAQHIIQVSGC 235
G A +++ GC
Sbjct: 269 IGAATASFVVEAKGC 283
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 1e-16
Identities = 43/257 (16%), Positives = 77/257 (29%), Gaps = 52/257 (20%)
Query: 1 MGAVGKD--NYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAA 57
+GA G D +Y D L+ G+ + +T T + A+ A
Sbjct: 77 VGAAGADFADYRDWLK----ARGVNCDHVLISETAHTARFTCTTDVDM-AQIASFYPGAM 131
Query: 58 NLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYL----- 112
+ + + I E + + + C + +
Sbjct: 132 SEARNIK--LADVVSAIGKPEL-------VIIGANDPEAMFLHTEECRKLGLAFAADPSQ 182
Query: 113 -HHRFI------------YLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRER 159
R YL D+E + + D+ A +
Sbjct: 183 QLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMA--------------QID 228
Query: 160 ITIITQGDK-PIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVC 218
+ + T G K ++ +G T V +P S D G GD+F GFL+ G L
Sbjct: 229 LRVTTLGPKGVDLVEPDGTTIHVGV--VPETSQTDPTGVGDAFRAGFLTGRSAGLGLERS 286
Query: 219 IECGVWAAQHIIQVSGC 235
+ G A +++ +G
Sbjct: 287 AQLGSLVAVLVLESTGT 303
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 3e-16
Identities = 46/267 (17%), Positives = 86/267 (32%), Gaps = 51/267 (19%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLI-TDNGKARSLV---ANLA 55
+ VG D + G+ V + + + PTG + + A
Sbjct: 53 IAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSA 112
Query: 56 AANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRN---INY- 111
+ L +P+ + + + +++A+ + SG L +S + E A N
Sbjct: 113 GSKL-SPEDV----DEEYVKSADLVHSSGITLAIS-STAKEAVYKAFEIASNRSFDTNIR 166
Query: 112 ----------------LHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNP 155
L + ++ D + D A S+ +
Sbjct: 167 LKLWSAEEAKREILKLLSKFHLKFLITDTDDSKII----LGESDPDKAAKAFSDYAE--- 219
Query: 156 NRERITIITQGDKPIILSQNGKTTE---FPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG 212
I ++ G K I+ +GK + V V D GAGD+ G FLS KG
Sbjct: 220 ----IIVMKLGPKGAIVYYDGKKYYSSGYQVP------VEDVTGAGDALGGTFLSLYYKG 269
Query: 213 EPLSVCIECGVWAAQHIIQVSGCTLGL 239
+ ++ + A+ + + G L
Sbjct: 270 FEMEKALDYAIVASTLNVMIRGDQENL 296
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 4e-16
Identities = 33/266 (12%), Positives = 82/266 (30%), Gaps = 49/266 (18%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLV--ANLAAA 57
+ VG D + DI + + G+ ++ E TG+ V ++G R + AA
Sbjct: 57 ISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGD-RDFIFNIKNAAC 115
Query: 58 NLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP--ESILEVAKVALS--CTI------- 106
+ H+ + ++++ ++++ G L +++ + + + I
Sbjct: 116 GKLSAQHV----DENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIR 171
Query: 107 ----------RNINYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPN 156
++++ + + +
Sbjct: 172 KEMLDIPEMRDALHFVLELT-DIYMPSEGEVLLL----SPHSTPERAIAGFLEEGV---- 222
Query: 157 RERITIITQGDKPIILSQNGKTTE---FPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213
+ I+ +G++ + +PV+ VD GAGD F G +++ G
Sbjct: 223 --KEVIVKRGNQGASYYSANEQFHVESYPVE------EVDPTGAGDCFGGAWIACRQLGF 274
Query: 214 PLSVCIECGVWAAQHIIQVSGCTLGL 239
++ + G G
Sbjct: 275 DAHRALQYANACGALAVTRRGPMEGT 300
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 5e-16
Identities = 46/269 (17%), Positives = 85/269 (31%), Gaps = 53/269 (19%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTE-PTGT--CAVLITDNGKARSLV---ANL 54
+ VG D + + + G+ + D E TG K LV
Sbjct: 53 IARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMK-SELVYYRKGS 111
Query: 55 AAANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRN---INY 111
A + L +P+ + N ++N+ + +G L +S ++ E A N
Sbjct: 112 AGSRL-SPEDI----NENYVRNSRLVHSTGITLAIS-DNAKEAVIKAFELAKSRSLDTNI 165
Query: 112 ------------------LHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQ 153
L I +++ D + D K +
Sbjct: 166 RPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKIL----LDVTDPDEAYRK---YKEL 218
Query: 154 NPNRERITIITQGDKPIILSQNGKTTE---FPVQRLPAESVVDTNGAGDSFVGGFLSQLI 210
++ + G K I ++ + V V D GAGD+ G F+S +
Sbjct: 219 GV---KVLLYKLGSKGAIAYKDNVKAFKDAYKVP------VEDPTGAGDAMAGTFVSLYL 269
Query: 211 KGEPLSVCIECGVWAAQHIIQVSGCTLGL 239
+G+ + + G+ A+ +I V G
Sbjct: 270 QGKDIEYSLAHGIAASTLVITVRGDNELT 298
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 5e-16
Identities = 41/265 (15%), Positives = 85/265 (32%), Gaps = 49/265 (18%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTE-PTGTCAVLITDNGKARSLVANLAAANL 59
+ +G D + + L ++ D E T V ++ + + + A
Sbjct: 74 ISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTI--VYVSKSTRTPDWLPYREADMY 131
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP--ESILEVAKVALS--CTI--------- 106
D + +LI+ ++ +++S F L+ P ++ ++ A +
Sbjct: 132 LQEDDI----IFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKV 187
Query: 107 ---------RNINYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNR 157
+ + R V + F + + +
Sbjct: 188 LWPEGDDGAGVVEEIISRA-DFVKPSLDDARHL----FGPDSPENYVKR---YLELGV-- 237
Query: 158 ERITIITQGDKPIILSQNGKTTE---FPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP 214
+ I+T G++ +I S + F VD GAGD+F GF+ L+ G
Sbjct: 238 -KAVILTLGEEGVIASDGEEIIRIPAFSED------AVDVTGAGDAFWSGFICGLLDGYT 290
Query: 215 LSVCIECGVWAAQHIIQVSGCTLGL 239
+ I+ G A I+ G +
Sbjct: 291 VKRSIKLGNGVAAFKIRGVGALSPV 315
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 3e-15
Identities = 36/267 (13%), Positives = 73/267 (27%), Gaps = 50/267 (18%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLV---ANLAA 56
+ VG D + + L ++ G+ +Y T T I L A
Sbjct: 61 LSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDD-FPLYFYREPKAP 119
Query: 57 ANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP-ESILEVAKVALS--CTI------- 106
+ + ++ A+ + + + P +
Sbjct: 120 DLNIESADV----SLDDVREADILWFTLTGFSEEPSRGTHREILTTRANRRHTIFDLDYR 175
Query: 107 -----------RNINYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNP 155
+ + + + + E A + L ++
Sbjct: 176 PMFWESPEEATKQAEWALQHS-TVAVGNKEECEIA----VGETEPERAGRA---LLERGV 227
Query: 156 NRERITIITQGDKPIILSQNGKTTE---FPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG 212
+ I+ QG K ++ +T E F V V++ GAGD+F G L+
Sbjct: 228 ---ELAIVKQGPKGVMAMTKDETVEVPPFFVD------VINGLGAGDAFGGALCHGLLSE 278
Query: 213 EPLSVCIECGVWAAQHIIQVSGCTLGL 239
PL + A + C+ +
Sbjct: 279 WPLEKVLRFANTAGALVASRLECSTAM 305
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 4e-15
Identities = 43/265 (16%), Positives = 85/265 (32%), Gaps = 43/265 (16%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTE-PTGTCAVLITDNGKARSLV---ANLAA 56
+G D+ L + + G+ + D TG +G + AA
Sbjct: 78 ASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAA 137
Query: 57 ANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPES------ILEVAKVALSCTIRNIN 110
+++ + + + +A + + +G F +S + +++ + A + N
Sbjct: 138 SHM-GVADI----DEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPN 192
Query: 111 Y--------------LHH--RFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQN 154
++ VL E F +A +
Sbjct: 193 LRPTLWATPELMRDAINDLATRADWVLPGMEEGRFL----TGETTPEGVA---RFYRQLG 245
Query: 155 PNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP 214
++ ++ G + + P VVDT GAGD F G +S L+ G
Sbjct: 246 A---KLVVVKLGAEGAYFDGEAGSGRVAG--FPVAEVVDTVGAGDGFAVGVISALLDGLG 300
Query: 215 LSVCIECGVWAAQHIIQVSGCTLGL 239
+ ++ G W +QV G + GL
Sbjct: 301 VPEAVKRGAWIGARAVQVLGDSEGL 325
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 6e-15
Identities = 32/249 (12%), Positives = 70/249 (28%), Gaps = 39/249 (15%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
+++ S + + G V+ + T + + R ++AA+ FT
Sbjct: 57 TKCTREDVSKFSFLR--DNG--VEVVFLKSPRTTSIENRYGSDPDTRESFL-ISAADPFT 111
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYL------HHR 115
L E +++ + PE ++ V + + +
Sbjct: 112 ESDLAF-------IEGEAVHINPLWYGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKL 164
Query: 116 FIYLVLIDFEALAFAK---------QQNFQTEDLHAIALKISNLPKQNPNRERITIITQG 166
+ + L + + T DL I + +I + T
Sbjct: 165 VYRDWEMKEKYLKYLDLFKVDSREAETLTGTNDLRESCRIIRSFGA------KIILATHA 218
Query: 167 DKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL-SQLIKGEPLSVCIECGVWA 225
I+ +G E + S+ G GD+ FL + K + +
Sbjct: 219 SGVIVF--DGNFYEAS---FRSWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAV 273
Query: 226 AQHIIQVSG 234
++ G
Sbjct: 274 TSVKMRHPG 282
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 1e-14
Identities = 45/268 (16%), Positives = 91/268 (33%), Gaps = 47/268 (17%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY--QHHDTEPTGTCAVLITDNGKARSLV--ANLAA 56
+G + D + +ES G+ + TG I + S++ A
Sbjct: 64 IGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEE-CSILMYRQDVA 122
Query: 57 ANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP-----ESILEVAKVALSCTIRNINY 111
+P+ + N I+ ++ VSG L+ SP + +AK + ++Y
Sbjct: 123 DLYLSPEEV----NEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDY 178
Query: 112 -------------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNP 155
+ V+ E + + + D L K +P
Sbjct: 179 RPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRT-EKGDNDETIRY---LFKHSP 234
Query: 156 NRERITIITQGDKP-IILSQNGKTTE---FPVQRLPAESVVDTNGAGDSFVGGFLSQLIK 211
+ +I G + ++ G+ + + V+ T GAGDS+ FL LI
Sbjct: 235 ---ELIVIKHGVEGSFAYTKAGEAYRGYAYKTK------VLKTFGAGDSYASAFLYALIS 285
Query: 212 GEPLSVCIECGVWAAQHIIQVSGCTLGL 239
G+ + ++ G +A ++ + +
Sbjct: 286 GKGIETALKYGSASASIVVSKHSSSDAM 313
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 2e-14
Identities = 44/241 (18%), Positives = 79/241 (32%), Gaps = 36/241 (14%)
Query: 1 MGAVGKD---NYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAA 56
+G VG D + D+L +K + + Q + T A + R +
Sbjct: 49 VGVVGSDFGKEHFDLLHAK----NIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDT--Q 102
Query: 57 ANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRF 116
N+F HVP+ + + + PE L+V + + ++
Sbjct: 103 LNVFAEFDPHVPQYYRDSKFV-------CLGNIDPELQLKVLDQIDDPKLVVCDTMNFWI 155
Query: 117 IYLVLIDFEALAFA---------KQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGD 167
+ LA + +L A I + II +G+
Sbjct: 156 EGKPEELKKVLARVDVFIVNDSEARLLSGDPNLVKTARIIRE------MGPKTLIIKKGE 209
Query: 168 KPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVC--IECGVWA 225
+L + P P ES+ D GAGD+F GGF+ L + S + ++
Sbjct: 210 HGALLFTDNGIFAAPA--FPLESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAVLYG 267
Query: 226 A 226
+
Sbjct: 268 S 268
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 3e-14
Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 50/254 (19%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAANL 59
MG +G + L+ + GL +Y + + A++ TD + + A
Sbjct: 67 MGTLGAVDAQPYLDRMDAL-GLSREYVRVLPDTYSAQ-AMITTDLDNNQITAFHPGAMMQ 124
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINY-------- 111
+H ++ KL V P+ + + + +
Sbjct: 125 SHVNHAGEAKDIKL-------------AIVGPDGFQGMVQHTEELAQAGVPFIFDPGQGL 171
Query: 112 ------LHHRFI----YLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERIT 161
R I Y+ + D+EA + + +++ + R +
Sbjct: 172 PLFDGATLRRSIELATYIAVNDYEAKLVCDKTGWSEDEIAS--------------RVQAL 217
Query: 162 IITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIEC 221
IIT+G+ + T + P + AE V+D G GD+F GG L + G +
Sbjct: 218 IITRGEHGATIRHRDGTEQIPA--VRAERVIDPTGCGDAFRGGLLYGIEHGFDWATAGRL 275
Query: 222 GVWAAQHIIQVSGC 235
I G
Sbjct: 276 ASLMGALKIAHQGP 289
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 4e-14
Identities = 52/271 (19%), Positives = 80/271 (29%), Gaps = 55/271 (20%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLV--ANLAAA 57
+G +G D+ L + G+ V + + + V +T +G+ RS + A
Sbjct: 70 IGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGE-RSFTYLVHPGAD 128
Query: 58 NLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP--ESILEVAKVALSCTIR---NINY- 111
+P L + E++Y S LT P E+ LE A+ ++N
Sbjct: 129 TYVSPQDL------PPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLR 182
Query: 112 ------------LHHRFIY---LVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPN 156
L R + + + L L
Sbjct: 183 SKMWGNTDEIPELIARSAALASICKVSADELCQL----SGASHWQDARYY---LRDLGC- 234
Query: 157 RERITIITQGDKPIILSQNGKTTE---FPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213
TII+ G +L V VVDT GAGD+FVGG L L +
Sbjct: 235 --DTTIISLGADGALLITAEGEFHFPAPRVD------VVDTTGAGDAFVGGLLFTLSRAN 286
Query: 214 PLSV-----CIECGVWAAQHIIQVSGCTLGL 239
I + G L
Sbjct: 287 CWDHALLAEAISNANACGAMAVTAKGAMTAL 317
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 9e-14
Identities = 41/241 (17%), Positives = 73/241 (30%), Gaps = 48/241 (19%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
AVG + + L S G+ + + +G + TD + + A +
Sbjct: 76 YSAVGMKTHREYLAMIESM-GINTGHVEKFEDESGPICYIATDGK-KQVSFMHQGAMAAW 133
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFIY-- 118
P + + + + + +A S + I+
Sbjct: 134 APQ---LADEYEYVH---------------FSTGPNYLDMAKSIRSK--------IIFDP 167
Query: 119 ---LVLIDFEAL-AFAKQQNF----QTEDLHAIALKISNLPKQNPNRERITIITQGDKPI 170
+ + L F + E + + + TI+T G++
Sbjct: 168 SQEIHKYSKDELKKFHEISYMSIFNDHE-----YRVFREMTGLSS-PKVTTIVTNGERGS 221
Query: 171 ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHII 230
L +GK +FP S DT GAGDSF G L + + G A H+I
Sbjct: 222 SLFMDGKKYDFP----AIPSSGDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTIIAHHVI 277
Query: 231 Q 231
Sbjct: 278 D 278
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 4e-13
Identities = 47/266 (17%), Positives = 85/266 (31%), Gaps = 54/266 (20%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLV---ANLAAA 57
+G VG+D ++E + G+ + + TG G + A +
Sbjct: 53 VGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLG-QGRVFYYRKGSAGS 111
Query: 58 NLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESI------LEVAKVALSCTIRNINY 111
L P + ++ + ++SG +SPE+ +E AK ++NY
Sbjct: 112 AL-APGAF----DPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNY 166
Query: 112 -------------LHH--RFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPN 156
L + L+ + E F + AL
Sbjct: 167 RQTLWSPEEARGFLERALPGVDLLFLSEEEAELL----FGRVEEALRALSA--------- 213
Query: 157 RERITIITQGDKPIILSQNGKTTE---FPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213
++ +G K +G+ E F V+ VD GAGD+F G+L+ + G
Sbjct: 214 --PEVVLKRGAKGAWAFVDGRRVEGSAFAVE------AVDPVGAGDAFAAGYLAGAVWGL 265
Query: 214 PLSVCIECGVWAAQHIIQVSGCTLGL 239
P+ + + G G
Sbjct: 266 PVEERLRLANLLGASVAASRGDHEGA 291
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 | Back alignment and structure |
|---|
Score = 65.6 bits (161), Expect = 7e-13
Identities = 52/243 (21%), Positives = 84/243 (34%), Gaps = 38/243 (15%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAAN- 58
+ G D+ + + + + + + E TG + + G+ + A AN
Sbjct: 61 IACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANA 118
Query: 59 LFTPDHLHVPENNKLIQNAEYYYVSGFFLT---VSPESILEVAKVALSCTIRNI------ 109
+P V + I NA L ES++ AK+A
Sbjct: 119 ALSPAL--VEAQRERIANASA------LLMQLESPLESVMAAAKIAHQNKTIVALNPAPA 170
Query: 110 NYLHHRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
L L L+D EA + ED A + + +I
Sbjct: 171 RELPDEL--LALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRT------VLI 222
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
T G + + S NG+ P R+ A VDT AGD+F G ++ L++ +PL I
Sbjct: 223 TLGSRGVWASVNGEGQRVPGFRVQA---VDTIAAGDTFNGALITALLEEKPLPEAIRFAH 279
Query: 224 WAA 226
AA
Sbjct: 280 AAA 282
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 1e-12
Identities = 48/266 (18%), Positives = 87/266 (32%), Gaps = 64/266 (24%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAANL 59
+ VG D + + L + S+ + + + + TG V + + L + A
Sbjct: 53 ISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDD-VAYFN 111
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP--ESILEVAKVALSCTIRN-------IN 110
T + + N +++ A+ L +P E++++V K + +N
Sbjct: 112 MTLNDI----NWDIVEEAKIVNFGSVILARNPSRETVMKVIKKI-----KGSSLIAFDVN 162
Query: 111 YLHHRFIYLVLI-DFEALAFAKQQNFQTEDLHAIA-----LKIS----------NLPKQN 154
R L L E + L +K S + +
Sbjct: 163 L---R---LDLWRGQEEEM--------IKVLEESIKLADIVKASEEEVLYLENQGVEVKG 208
Query: 155 PNRERITIITQGDKPIILSQNGKTTE---FPVQRLPAESVVDTNGAGDSFVGGFLSQL-- 209
+T IT G K L +N + + V +DT GAGD+F+ L +
Sbjct: 209 S---MLTAITLGPKGCRLIKNETVVDVPSYNVN------PLDTTGAGDAFMAALLVGILK 259
Query: 210 IKGEPLSVCIECGVWAAQHIIQVSGC 235
+KG L + A Q G
Sbjct: 260 LKGLDLLKLGKFANLVAALSTQKRGA 285
|
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 4e-12
Identities = 45/259 (17%), Positives = 86/259 (33%), Gaps = 46/259 (17%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKAR-SLVANLAAAN 58
+G +G D + D L +E G+V T T V + +G+ S AA
Sbjct: 56 VGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADL 115
Query: 59 LFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP-----ESILEVAKVALSCTIRNINYLH 113
LF +H + +A ++ +T + + A+ A + ++N+
Sbjct: 116 LFRVEHF----QDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNF-- 169
Query: 114 HRFIYLVLIDFEALAFAKQQNF--------------------QTEDLHAIALKISNLPKQ 153
R +L ++ D +A+ + L +
Sbjct: 170 -R---PMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQ---LWQG 222
Query: 154 NPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213
++ ++T P+ E P R+ V D+N AGD+FVGG L +
Sbjct: 223 RA---QLLLVTDAAGPVHWYTRTAGGEVPTFRVQ---VQDSNAAGDAFVGGMLYTFAQQF 276
Query: 214 PLSVCIECGVWAAQHIIQV 232
+ + + I+
Sbjct: 277 DDAAALIDFCHDPESIVST 295
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 7e-12
Identities = 46/244 (18%), Positives = 89/244 (36%), Gaps = 39/244 (15%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAAN- 58
+ +G D +D + + Y TG + + G+ V AN
Sbjct: 60 ITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANM 117
Query: 59 LFTPDHLHVPENNKLIQNAEYYYVSGFFLT---VSPESILEVAKVALSCTIRNI------ 109
TP+ V I NA++ + V +I+ ++A + + +
Sbjct: 118 TMTPED--VINAKDAIINADF------VVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPA 169
Query: 110 NYLHHRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
L + L LID EA + + + + A ++ + +I
Sbjct: 170 KALPNEL--LSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKT------VLI 221
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG-EPLSVCIECG 222
T G + + ++ ++ A +DT AGD+F+G F+S+L K + L+ I+ G
Sbjct: 222 TLGKQGTYFATKNQSQHIEAYKVNA---IDTTAAGDTFIGAFVSRLNKSQDNLADAIDFG 278
Query: 223 VWAA 226
A+
Sbjct: 279 NKAS 282
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 | Back alignment and structure |
|---|
Score = 62.5 bits (153), Expect = 1e-11
Identities = 51/239 (21%), Positives = 88/239 (36%), Gaps = 38/239 (15%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAAN-L 59
+ +G D+YSD+L + G + + PTG + + G+ R ++ AN
Sbjct: 72 VTCIGNDDYSDLLIENYEKLG--ITGYIRVSLPTGRAFIEVDKTGQNRIIIF--PGANAE 127
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLT---VSPESILEVAKVALSCTIRN---INYLH 113
+ + + ++ L + E+ LE AK I + ++
Sbjct: 128 LKKELIDWN----TLSESDI------LLLQNEIPFETTLECAKRFNGIVIFDPAPAQGIN 177
Query: 114 HRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGD 167
+D+ E A +K + + A K L +N I+ GD
Sbjct: 178 EEI--FQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKN------VIVKLGD 229
Query: 168 KPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226
K ++L + FP ++ A VDT AGD F G F L +G+ + G AA
Sbjct: 230 KGVLLVNKNEKKHFPTFKVKA---VDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAA 285
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 9e-11
Identities = 52/248 (20%), Positives = 87/248 (35%), Gaps = 43/248 (17%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAAN- 58
+ VGKD++ + + + ++ TGT ++++ + G+ ++ A AN
Sbjct: 81 VCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIV--AGANL 138
Query: 59 LFTPDHLHVPENNKLIQNAEYYYVSGFFLT---VSPESILEVAKVALSC---TIRN---- 108
L + + +I A+ + ++P + LE +A T+ N
Sbjct: 139 LLNTED--LRAAANVISRAK------VMVCQLEITPATSLEALTMARRSGVKTLFNPAPA 190
Query: 109 INYLHHRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITI 162
I L +F L D EA D AL + Q I
Sbjct: 191 IADLDPQF--YTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQV------VI 242
Query: 163 ITQGDKPIILSQNGKTTEFPVQRLPAESV--VDTNGAGDSFVGGFLSQL--IKGEPLSVC 218
IT G + ++ + + P E V VDT GAGDSFVG L L
Sbjct: 243 ITLGAEGCVVLSQTEPEPKHI---PTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDM 299
Query: 219 IECGVWAA 226
+ + A
Sbjct: 300 LNRSNFIA 307
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 6e-10
Identities = 30/275 (10%), Positives = 76/275 (27%), Gaps = 50/275 (18%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANL----AA 56
+ + + + ++ + G+ ++ + G+ G + V +A
Sbjct: 54 ITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGS-FFAEMGYGIRPTQVTYQNRHQSA 112
Query: 57 ANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP---ESILEVAKVA------LSCTIR 107
+ + + ++ G L+++ ++ L +A+ A +
Sbjct: 113 FGISEAKDYDFEA---FLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCF--- 166
Query: 108 NINY----------LHHRFIYLVLIDF---------EALAFAKQQNFQTEDLHAIALKIS 148
+ NY L R Y ++ + + + + + A ++
Sbjct: 167 DFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELI 226
Query: 149 NLPKQNPNRERITIITQGDKPI-------ILSQNGKTTEFPVQRLPAESVVDTNGAGDSF 201
N E T L + + + L +D GAGD++
Sbjct: 227 QRFMSQYNLEWF-AGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLL---NLDRIGAGDAY 282
Query: 202 VGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSGCT 236
G L + L + + G
Sbjct: 283 AAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDI 317
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-09
Identities = 43/276 (15%), Positives = 88/276 (31%), Gaps = 54/276 (19%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLV----ANLAA 56
+ + + D +FG+ Y G L + S V A+ A
Sbjct: 64 VTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGI-YFLEIGASQRPSKVVYDRAHSAI 122
Query: 57 ANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP---ESILEVAKVA------LSCTIR 107
+ + + ++ A +++ SG + + + KVA +SC
Sbjct: 123 SEA-KREDFDWEK---ILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSC--- 175
Query: 108 NINY-------------LHH--RFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPK 152
++NY + ++ +++ + E + + + DL L K
Sbjct: 176 DLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAK 235
Query: 153 ------QNPNRERITIITQGDKPI--------ILSQNGKTTEFPVQRLPAESVVDTNGAG 198
+ N + + IT + ++ +NG+ + +VD GAG
Sbjct: 236 IAEEVTRKYNFKTV-GITLRESISATVNYWSVMVFENGQPHFSNRYEIH---IVDRVGAG 291
Query: 199 DSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSG 234
DSF G + + G E A+ + G
Sbjct: 292 DSFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPG 327
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 1e-08
Identities = 44/250 (17%), Positives = 76/250 (30%), Gaps = 69/250 (27%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAAN-L 59
+ A G D+ + + L++ H + + T +L + +G + AA
Sbjct: 59 IAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITT--TAAADT 116
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLT---VSPESILEVAKVALSCTIRNINYLHHRF 116
F+ D + + + L S + + + A S
Sbjct: 117 FSLDE--MIPHMADAVAGD------ILLQQGNFSLDKTRALFQYARS--------RGMTT 160
Query: 117 IY------------LVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRE 158
++ LID EA E L +K
Sbjct: 161 VFNPSPVNPDFCHLWPLIDIAVVNESEA-----------ELLQPYGVKT----------- 198
Query: 159 RITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG--EPLS 216
+ITQG L Q G+ P A +DT GAGD+F+ L+ + P +
Sbjct: 199 --LVITQGAAGAWLVQEGQRQFCPAVPAEA---LDTTGAGDTFLAVMLASALLRGVAPDA 253
Query: 217 VCIECGVWAA 226
+ + AA
Sbjct: 254 LALAHASRAA 263
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 5e-08
Identities = 42/242 (17%), Positives = 66/242 (27%), Gaps = 58/242 (23%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFT 61
GA G D + L + + + P+GT +++ + + LVA AN
Sbjct: 77 GAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVA--PGANA-- 132
Query: 62 PDHLHVPENNKLIQNAEYYYVSGFFLT---VSPESILEVAKVALSCTIRNI-N---YLHH 114
H+ + N LT + + L A+ A S + N
Sbjct: 133 ----HLTPVPSAVANC------DVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQD 182
Query: 115 RFI---YLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
R + D EA D + +IT
Sbjct: 183 RSSLQDLAAIADVVIANEHEA-----------NDWPSPPTHF--------------VITL 217
Query: 166 GDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225
G + E P + VDT GAGD F G + + +
Sbjct: 218 GVRGARYVGADGVFEVPAPTVTP---VDTAGAGDVFAGVLAANWPRNPGSPAERLRALRR 274
Query: 226 AQ 227
A
Sbjct: 275 AC 276
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 1e-07
Identities = 43/243 (17%), Positives = 61/243 (25%), Gaps = 44/243 (18%)
Query: 2 GAVGKDNYSDILESKASEFGLVVKY-QHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
GAVG D + SE G+ + ++I + G R +V L
Sbjct: 87 GAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRG-ERLIVPF-YDHRL- 143
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLT--VSPESILEVAKVALSCTIRNI-------NY 111
I L PE L+V VA + I
Sbjct: 144 HEKKRACTPE--DIALF------DAVLVDVRWPELALDVLTVARALGKPAILDGDVAPVE 195
Query: 112 LHHRFIYLVLIDF------EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQ 165
A E + + L + P +T
Sbjct: 196 TLEGL--APAATHIVFSEPAATRLT-----GLETVKDMLPV---LHARYPQT--FIAVTA 243
Query: 166 GDKPIILSQNGKTTEFPVQRLPAESV--VDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223
G ++ T V V VDT AGD F G F + +G +
Sbjct: 244 GPAGCWWTEADDPT---VHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSS 300
Query: 224 WAA 226
AA
Sbjct: 301 VAA 303
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 100.0 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 100.0 | |
| 3vas_A | 370 | Putative adenosine kinase; ribokinase, enzyme, tra | 100.0 | |
| 3uq6_A | 372 | Adenosine kinase, putative; ribokinase, transferas | 100.0 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 100.0 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 100.0 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 100.0 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 100.0 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 100.0 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 100.0 | |
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 100.0 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 100.0 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 100.0 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 100.0 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 100.0 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 100.0 | |
| 3umo_A | 309 | 6-phosphofructokinase isozyme 2; glycolysis, trans | 100.0 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 100.0 | |
| 4e84_A | 352 | D-beta-D-heptose 7-phosphate kinase; LPS-heptose b | 100.0 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 100.0 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 100.0 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 100.0 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 100.0 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 100.0 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 100.0 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 100.0 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 100.0 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 100.0 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 100.0 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 100.0 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 100.0 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 100.0 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 100.0 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 100.0 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 100.0 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 100.0 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 100.0 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 100.0 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 100.0 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 100.0 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 100.0 | |
| 4gm6_A | 351 | PFKB family carbohydrate kinase; enzyme function i | 100.0 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 100.0 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 100.0 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 99.98 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 99.98 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 99.97 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 99.97 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 99.97 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 99.97 | |
| 2yxt_A | 312 | Pyridoxal kinase; beta sheet with alpha helix, met | 99.91 | |
| 2ddm_A | 283 | Pyridoxine kinase; pyridoxal kinase, ribokinase, p | 99.9 | |
| 1jxh_A | 288 | Phosphomethylpyrimidine kinase; THID, ribokinase f | 99.8 | |
| 1ub0_A | 258 | THID, phosphomethylpyrimidine kinase; thiamin bios | 99.8 | |
| 3pzs_A | 289 | PM kinase, pyridoxamine kinase; structural genomic | 99.77 | |
| 2i5b_A | 271 | Phosphomethylpyrimidine kinase; ADP complex, PDXK, | 99.76 | |
| 3h74_A | 282 | Pyridoxal kinase; PSI-II, structural genomics, pro | 99.71 | |
| 3mbh_A | 291 | Putative phosphomethylpyrimidine kinase; structura | 99.69 | |
| 3zs7_A | 300 | Pyridoxal kinase; transferase, sleeping sickness; | 99.65 | |
| 1ekq_A | 272 | Hydroxyethylthiazole kinase; alpha-beta, transfera | 99.49 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 99.36 | |
| 1v8a_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 98.89 | |
| 2r3b_A | 310 | YJEF-related protein; putative kinase in the ribok | 98.48 | |
| 3bgk_A | 311 | SMU.573, putative uncharacterized protein; alpha/b | 98.39 | |
| 3rpz_A | 279 | ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str | 98.35 | |
| 3rss_A | 502 | Putative uncharacterized protein; unknown function | 98.34 | |
| 3dzv_A | 273 | 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ | 98.29 | |
| 3hpd_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 97.11 | |
| 3nl6_A | 540 | Thiamine biosynthetic bifunctional enzyme; thiamin | 96.92 | |
| 3k5w_A | 475 | Carbohydrate kinase; 11206B,helicobacter pylori,PS | 96.43 | |
| 3drw_A | 474 | ADP-specific phosphofructokinase; AMP, GLYC kinase | 96.29 | |
| 1l2l_A | 457 | ADP-dependent glucokinase; ADP glucokinase APO, tr | 80.17 |
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=282.35 Aligned_cols=236 Identities=53% Similarity=0.882 Sum_probs=199.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|+||+|.+|+.+++.|+++||+++++.+.+.+|++++++++ +++|+++.+.+++..+++++++....++.+++++++
T Consensus 103 ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~--~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v 180 (365)
T 3loo_A 103 FGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT--GTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFF 180 (365)
T ss_dssp EEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEE--TTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEE
T ss_pred EEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEE--CCceEEEeccchHhhCCHhHcCchhhHHHHhhCCEE
Confidence 578999999999999999999999999886679999998887 678888888888889998888754445778899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|++|+.+.++++.+.++++.+++.| ++|+ |. +.++++++ ++|++|++.|++....+.+++++++
T Consensus 181 ~i~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~ 260 (365)
T 3loo_A 181 YVSGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIG 260 (365)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHH
T ss_pred EEeeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHH
Confidence 9999988777889999999999988 6666 43 23566665 9999999999998666778899999
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEE--ECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILS--QNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~--~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
+.+.++......|++.||||+|++|++++ ++++.+++|+++++..+++||+||||+|+|||++++++|+++++|+++|
T Consensus 261 ~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~a 340 (365)
T 3loo_A 261 KRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCG 340 (365)
T ss_dssp HHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 99987532122388999999999999999 7777888998887444799999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCcCC
Q psy6977 223 VWAAQHIIQVSGCTLG 238 (239)
Q Consensus 223 ~~~a~~~~~~~G~~~~ 238 (239)
+++|+.++++.|+++|
T Consensus 341 ~~~Aa~~v~~~G~~~p 356 (365)
T 3loo_A 341 IWAAREIIQRSGCTFE 356 (365)
T ss_dssp HHHHHHHHHHGGGGGG
T ss_pred HHHHHHHHcCCCCCCC
Confidence 9999999999999876
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=279.02 Aligned_cols=236 Identities=32% Similarity=0.572 Sum_probs=199.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|+||+|.+|+.+++.|+++||+++++...+.+|+.++++++ +++|+++.+.+++..+++++++....++.+++++++
T Consensus 89 ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~--~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~ 166 (347)
T 3otx_A 89 VGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCIT--GKERTLVADLGAANHLSSEHMRSPAVVRAMDESRIF 166 (347)
T ss_dssp ECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEE--TTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred EEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEE--CCceeeeechhhhhcCCHHHcCchhhHHHHhhCCEE
Confidence 588999999999999999999999998766779999998887 778888888888888888877754445788999999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|++|+.+.++++.+.++++.+++.| ++|+ |.+ .++++++ ++|++|++.|++....+.+++++++
T Consensus 167 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~~ 246 (347)
T 3otx_A 167 YFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIA 246 (347)
T ss_dssp EEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHHH
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHHH
Confidence 9999988888899999999999998 6666 432 2566665 9999999999997666668899999
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+.++.+.+..|++.||||+|++|++++++++.+++++++++..+++||+||||+|+|||++++++|+++++|+++|++
T Consensus 247 ~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~a~~ 326 (347)
T 3otx_A 247 RRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCETGHY 326 (347)
T ss_dssp HHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 99885331111489999999999999999999888999888754578999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++++.|+++|
T Consensus 327 ~aa~~v~~~G~~~p 340 (347)
T 3otx_A 327 TAQEVIQRDGCSFP 340 (347)
T ss_dssp HHHHHHTCC----C
T ss_pred HHHHHHcccCCCCC
Confidence 99999999999876
|
| >3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=278.94 Aligned_cols=236 Identities=32% Similarity=0.556 Sum_probs=203.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.++++++ +++|+++.+.+++..+++++++..+..+.++++++
T Consensus 104 ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~--~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~ 181 (370)
T 3vas_A 104 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS--EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQV 181 (370)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC--SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe--CCceeEEEccchhhhCCHHHcCchhhHHHHhhCCE
Confidence 57899999999999999999999999987 6679999999887 67888888888888898888775444567899999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
+|++|+.+.++++.+.++++.+++.| ++|+ |.+ .++++++ ++|++|+..|++....+.++++++
T Consensus 182 v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~ 261 (370)
T 3vas_A 182 YYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHAT 261 (370)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHH
T ss_pred EEEEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHH
Confidence 99999988877889999999999988 6676 432 3566655 999999999999866666789999
Q ss_pred HHHHhcCCCCCCC-CceEEEEeeCCCcEEEEE--CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHH
Q psy6977 144 ALKISNLPKQNPN-RERITIITQGDKPIILSQ--NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIE 220 (239)
Q Consensus 144 ~~~l~~~~~~~~~-g~~~vvvt~G~~G~~~~~--~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~ 220 (239)
++.+.++.+.+.. |++.||||+|++|+++++ +++.+++|+++++..+++||+||||+|+|||++++++|+++++|++
T Consensus 262 ~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~ 341 (370)
T 3vas_A 262 ARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLH 341 (370)
T ss_dssp HHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCCHHHHHH
Confidence 9999875321112 789999999999999999 7888899998875458999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcCC
Q psy6977 221 CGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~~~~ 238 (239)
+|+++|+.++++.|+++|
T Consensus 342 ~A~aaAa~~v~~~G~~~p 359 (370)
T 3vas_A 342 AAVKAAAYIICRSGFSLG 359 (370)
T ss_dssp HHHHHHHHHHTSSSSCCC
T ss_pred HHHHHHHHHHcccCCcCC
Confidence 999999999999999887
|
| >3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-40 Score=273.75 Aligned_cols=236 Identities=32% Similarity=0.552 Sum_probs=197.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+++++.|++.||+++++... +.+|+.+.++++ +++|+++.+.+++..+++++++....+..++.+++
T Consensus 106 iG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~--dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~ 183 (372)
T 3uq6_A 106 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS--EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQV 183 (372)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC--SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC--CCceEEEEeccchhhcchhhhhhhhHHHHhhcccE
Confidence 478999999999999999999999998865 457888777665 78899888889999999988887666788999999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
++++|+....+++.+.++++.+++.| .+|+ |+. .++++++ ++|++|+..|++......++.+++
T Consensus 184 ~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~ 263 (372)
T 3uq6_A 184 YYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHAT 263 (372)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHH
T ss_pred EEEecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHH
Confidence 99999887766788899999999998 5565 432 2556665 999999999999877677788888
Q ss_pred HHHHhcCCCC-CCCCceEEEEeeCCCcEEEEECCe--EEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHH
Q psy6977 144 ALKISNLPKQ-NPNRERITIITQGDKPIILSQNGK--TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIE 220 (239)
Q Consensus 144 ~~~l~~~~~~-~~~g~~~vvvt~G~~G~~~~~~~~--~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~ 220 (239)
++.+.++... ...+++.||+|+|++|+++++++. ...++.++++..++||||||||+|+|||+++|++|+++++|++
T Consensus 264 a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l~~a~~ 343 (372)
T 3uq6_A 264 ARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLH 343 (372)
T ss_dssp HHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCCHHHHHH
Confidence 8887654221 124778999999999999998753 3455555554458999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcCC
Q psy6977 221 CGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~~~~ 238 (239)
+|+.+|+.++++.|+++|
T Consensus 344 ~a~~aAa~vv~~~Ga~lp 361 (372)
T 3uq6_A 344 AAVKAAAYIICRSGFSLG 361 (372)
T ss_dssp HHHHHHHHHHTSSSSCCC
T ss_pred HHHHHHHHHHcCCCCCCC
Confidence 999999999999999876
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=262.29 Aligned_cols=236 Identities=44% Similarity=0.736 Sum_probs=197.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCC-CCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPD-HLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~-~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++...+.+|+.++++++ +++|+++.+.+++..++++ +++.....+.++++++
T Consensus 87 ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~--~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 164 (345)
T 1bx4_A 87 FGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT--GDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARV 164 (345)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEE--TTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSE
T ss_pred EEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEc--CCceEeeeccchHhhcCcccccCcHHHHHHHhhCCE
Confidence 478999999999999999999999999866679999988886 5678777777888888888 7765334466789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
+|++|+.+.++.+.+..+++.+++.| ++|+ +.+ .++++++ ++|++|+..|++....+.++++++
T Consensus 165 v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~ 244 (345)
T 1bx4_A 165 CYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 244 (345)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHH
T ss_pred EEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHH
Confidence 99999988888899999999999888 6676 322 2466655 999999999999754556788899
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
++.+.++......|++.||||+|++|++++++++.++++++++++.+++||+||||+|+|||++++++|+++++|+++|+
T Consensus 245 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~ 324 (345)
T 1bx4_A 245 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGH 324 (345)
T ss_dssp HHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99888731000018899999999999999988888888887764447999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcCC
Q psy6977 224 WAAQHIIQVSGCTLG 238 (239)
Q Consensus 224 ~~a~~~~~~~G~~~~ 238 (239)
++|+.++++.|+++|
T Consensus 325 ~~aa~~v~~~G~~~p 339 (345)
T 1bx4_A 325 YAASIIIRRTGCTFP 339 (345)
T ss_dssp HHHHHHTTSSSSCCC
T ss_pred HHHHHHHhccCCCCC
Confidence 999999999998865
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=259.17 Aligned_cols=219 Identities=23% Similarity=0.368 Sum_probs=190.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|++.||+++++.+. +.+|+.+++++++ +++|+++.+.+++..+++++++. ..++++++
T Consensus 100 ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~-~g~r~~~~~~ga~~~l~~~~~~~----~~~~~~~~ 174 (352)
T 4e3a_A 100 FGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTE-DGERSMNTYLGACVELGPEDVEA----DVVADAKV 174 (352)
T ss_dssp ECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECT-TSCEEEEEECGGGGGCCGGGCCH----HHHHTEEE
T ss_pred EEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcC-CCceEEEeccChhhcCChhhCCH----HHHhhCCE
Confidence 589999999999999999999999999864 5689999998886 77888887888888999888874 67889999
Q ss_pred EEEeccccc--cChHHHHHHHHHhhhCC---CCCh--hh--------HHHHhh--HH---hcCHHHHHHHHHHcCCCccC
Q psy6977 80 YYVSGFFLT--VSPESILEVAKVALSCT---IRNI--NY--------LHHRFI--YL---VLIDFEALAFAKQQNFQTED 139 (239)
Q Consensus 80 ~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~--p~--------~~~~~~--~~---~~n~~E~~~l~~~~~~~~~~ 139 (239)
+|++|+... .+.+.+.++++.+++.| ++|+ |. +.++++ ++ ++|++|+..|++. ++
T Consensus 175 v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~-----~~ 249 (352)
T 4e3a_A 175 TYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQT-----DD 249 (352)
T ss_dssp EEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTC-----SC
T ss_pred EEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCC-----CC
Confidence 999998642 44578899999999988 5555 32 236777 55 9999999999875 67
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHH
Q psy6977 140 LHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219 (239)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~ 219 (239)
++++++.+.+ +++.||||+|++|++++++++.+++|+++++ +++||+||||+|+|||++++++|+++++|+
T Consensus 250 ~~~a~~~l~~-------~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~agfl~~l~~g~~l~~a~ 320 (352)
T 4e3a_A 250 FEEALNRIAA-------DCKIAAVTMSENGAVILKGRERYYVNAIRIR--EVVDTTGAGDLFASGFLYGYTQGRSLEDCG 320 (352)
T ss_dssp HHHHHHHHHH-------HSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHhc-------CCCEEEEEECCCceEEEECCEEEEECCccCC--CCcCCCChHHHHHHHHHHHHHcCCCHHHHH
Confidence 8888888775 6789999999999999999999999998872 489999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCcCC
Q psy6977 220 ECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 220 ~~a~~~a~~~~~~~G~~~~ 238 (239)
++|+++|+.++++.|++++
T Consensus 321 ~~A~~aAa~~v~~~G~~~~ 339 (352)
T 4e3a_A 321 KLGCLAAGIVIQQIGPRPM 339 (352)
T ss_dssp HHHHHHHHHHTTSSSSSCS
T ss_pred HHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999876
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=254.32 Aligned_cols=232 Identities=31% Similarity=0.483 Sum_probs=187.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+.+++.|+++||+++++...+.+|+.++++++ +++|+++.+.+++..+++++ ...+.+.+++++
T Consensus 111 ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~--~g~r~~~~~~~a~~~l~~~~----~~~~~l~~~~~v 184 (383)
T 2abs_A 111 MGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN--EKERTLCTHLGACGSFRLPE----DWTTFASGALIF 184 (383)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE--TTEEEEEEECGGGGGCCCCT----THHHHTTTCCEE
T ss_pred EEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEc--CCceeEeeccChhhhCChhh----hhHHHhhcCCEE
Confidence 478999999999999999999999999866669999998886 57787777777777787752 123668899999
Q ss_pred EEeccccccChHHHHHHHHHhhh-CC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCC-------
Q psy6977 81 YVSGFFLTVSPESILEVAKVALS-CT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQ------- 136 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~-~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~------- 136 (239)
|++|+.+.++.+.+..+++.+++ .+ ++|+ +.+ .++++++ ++|++|++.|++.....
T Consensus 185 ~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~ 264 (383)
T 2abs_A 185 YATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTAL 264 (383)
T ss_dssp EEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-------
T ss_pred EEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCccccccccc
Confidence 99998887888999999999998 77 6676 322 2456655 99999999999864222
Q ss_pred -----ccCHHHHHHHHhcCCCCCCC-CceEEEEeeCCCcEEEE-----ECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 137 -----TEDLHAIALKISNLPKQNPN-RERITIITQGDKPIILS-----QNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 137 -----~~~~~~~~~~l~~~~~~~~~-g~~~vvvt~G~~G~~~~-----~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
.++++++++.+.++...... |++.||||+|++|++++ .+++.+++++++++..+++||+||||+|+|||
T Consensus 265 s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~ 344 (383)
T 2abs_A 265 STANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGF 344 (383)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHHHHH
Confidence 34566777777652100002 68999999999999998 55667788887664447999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
+++|++|+++++|+++|+++|+.++++.|+++|
T Consensus 345 ~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~~p 377 (383)
T 2abs_A 345 LYALSQGKTVKQCIMCGNACAQDVIQHVGFSLS 377 (383)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhcCCccCC
Confidence 999999999999999999999999999999866
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=247.06 Aligned_cols=219 Identities=20% Similarity=0.265 Sum_probs=183.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechh-hhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLA-AANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~-~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+++++.|+++||+++++.+ .+.+|+.+++++++ +++|+++.+.+ +...+++++++. ..+.+++
T Consensus 63 ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 137 (325)
T 3h49_A 63 MSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTE-DGERTFVTNRNGSLWKLNIDDVDF----ARFSQAK 137 (325)
T ss_dssp ECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECT-TSCEEEECCTTSHHHHCCGGGCCG----GGGGGCS
T ss_pred EEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECC-CCceeEEeccCcccccCChhhcCh----hhhccCC
Confidence 58899999999999999999999999886 45689999888876 67888776553 446677777763 5688999
Q ss_pred EEEEeccccc--cChHHHHHHHHHhhhCC--CCC--h-hh-------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHH
Q psy6977 79 YYYVSGFFLT--VSPESILEVAKVALSCT--IRN--I-NY-------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLH 141 (239)
Q Consensus 79 ~~~~~g~~~~--~~~~~~~~~~~~~~~~g--~~~--~-p~-------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~ 141 (239)
+++++|+... .+.+.+.++++.+++.+ +++ + |. +.++++++ ++|++|+..|++. ++++
T Consensus 138 ~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~ 212 (325)
T 3h49_A 138 LLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGK-----ETLD 212 (325)
T ss_dssp EEEEEEETTSTTSCHHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHHHHTTCSEEECBHHHHHHHHTC-----SSHH
T ss_pred EEEEecccCCcccCHHHHHHHHHHHHhcCCEEEecCCchhhhhHHHHHHHHHhhCCEEecCHHHHHHHhCC-----CCHH
Confidence 9999986543 34578899999999888 332 2 32 23556665 9999999999976 5788
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIEC 221 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 221 (239)
++++.+.++ |++.||||+|++|++++++++.+++|++++ .+++||+||||+|+|||++++++|+++++|+++
T Consensus 213 ~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~ 284 (325)
T 3h49_A 213 EIADCFLAC------GVKTVVIKTGKDGCFIKRGDMTMKVPAVAG--ITAIDTIGAGDNFASGFIAALLEGKNLRECARF 284 (325)
T ss_dssp HHHHHHHTT------TCSEEEEECTTSCEEEEETTEEEEECCCSS--CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHc------CCCEEEEEeCCCCeEEEECCeEEEecCcCC--CCCcCCCChhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 888888875 899999999999999999998888888774 279999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCcC
Q psy6977 222 GVWAAQHIIQVSGCTL 237 (239)
Q Consensus 222 a~~~a~~~~~~~G~~~ 237 (239)
|+++|+.++++.|++.
T Consensus 285 A~~~aa~~v~~~G~~~ 300 (325)
T 3h49_A 285 ANATAAISVLSVGATT 300 (325)
T ss_dssp HHHHHHHHHTSSSSSS
T ss_pred HHHHHHHHHcccCCCC
Confidence 9999999999999874
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=250.83 Aligned_cols=222 Identities=18% Similarity=0.251 Sum_probs=189.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++ +++++++.+++++..+++++++. ..+.++++++
T Consensus 60 ~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-~g~~~~~~~~ga~~~~~~~~~~~--~~~~~~~~~~ 136 (304)
T 3ry7_A 60 ITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNA-EGQNTIYVYGGANMTMTPEDVIN--AKDAIINADF 136 (304)
T ss_dssp ECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECS-SCCEEEEEECGGGGGCCHHHHHT--THHHHHTCSE
T ss_pred EEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECC-CCCEEEEEecCchhcCCHHHHHH--HHHHhccCCE
Confidence 57899999999999999999999999886 56799999998886 57777777788888888766643 2356889999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h---hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N---YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p---~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+++++ ..+.+.+..+++.+++.+ ++|+ + ...++++++ ++|++|+..|++....+.++++++++.+++
T Consensus 137 v~~~~---~~~~~~~~~~~~~a~~~~~~v~~D~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 213 (304)
T 3ry7_A 137 VVAQL---EVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLS 213 (304)
T ss_dssp EEEET---TSCHHHHHHHHHHHHHTTCEEEEECCSCCCCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHH
T ss_pred EEEcC---CCCHHHHHHHHHHHHHcCCEEEEeCCccccccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHH
Confidence 99964 456788999999999988 5666 3 244677766 999999999998744344567788888887
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG-EPLSVCIECGVWAAQH 228 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g-~~~~~a~~~a~~~a~~ 228 (239)
+ |++.|++|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++| +++++|+++|+++|+.
T Consensus 214 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~aa~ 284 (304)
T 3ry7_A 214 I------GIKTVLITLGKQGTYFATKNQSQHIEAYKV---NAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSL 284 (304)
T ss_dssp T------TCCEEEEECGGGCEEEECSSCEEEECCSSC---CSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHHHHT
T ss_pred c------CCCEEEEEeCCCceEEEECCeeEEecCCCc---ccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4 899999999999999999888999999988 79999999999999999999999 9999999999999999
Q ss_pred HHHhccCcC
Q psy6977 229 IIQVSGCTL 237 (239)
Q Consensus 229 ~~~~~G~~~ 237 (239)
++++.|++.
T Consensus 285 ~~~~~G~~~ 293 (304)
T 3ry7_A 285 TVQKHGAQA 293 (304)
T ss_dssp TSCCCCTGG
T ss_pred HhCCCCccc
Confidence 999999875
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-36 Score=246.58 Aligned_cols=219 Identities=17% Similarity=0.190 Sum_probs=170.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEee--chhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVA--NLAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~--~~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+.+++.|+++||+++++.+. +.+|+.+++.+++++.++.+.. ..+++..+++++++. +.++.+
T Consensus 78 ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~----~~l~~~ 153 (336)
T 4du5_A 78 ASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE----AWLLSA 153 (336)
T ss_dssp EEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH----HHHTTE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH----hHhccC
Confidence 478999999999999999999999999864 5689998888776343444422 346677888877764 578899
Q ss_pred eEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---hhH-----------HHHhhHH---hcCHHHHHHHHHHcC
Q psy6977 78 EYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---NYL-----------HHRFIYL---VLIDFEALAFAKQQN 134 (239)
Q Consensus 78 ~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p~~-----------~~~~~~~---~~n~~E~~~l~~~~~ 134 (239)
++++++|+.+..++ +.+.++++.+++.| ++|+ |.+ .++++++ ++|++|+..|++.
T Consensus 154 ~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~-- 231 (336)
T 4du5_A 154 RHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGE-- 231 (336)
T ss_dssp EEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCC--
T ss_pred CEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCC--
Confidence 99999997664433 56778889998888 3343 221 2455555 9999999999975
Q ss_pred CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC
Q psy6977 135 FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP 214 (239)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~ 214 (239)
++++++++.+.++ |++.||||+|++|++++++++.+++|+++++ +++||+||||+|+|||++++++|++
T Consensus 232 ---~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~--~vvdttGAGDaf~a~~~~~l~~g~~ 300 (336)
T 4du5_A 232 ---TTPEGVARFYRQL------GAKLVVVKLGAEGAYFDGEAGSGRVAGFPVA--EVVDTVGAGDGFAVGVISALLDGLG 300 (336)
T ss_dssp ---CSHHHHHHHHHHT------TCSEEEEECGGGCEEEEETTEEEEECCCCC---------CHHHHHHHHHHHHHHTTCC
T ss_pred ---CCHHHHHHHHHhc------CCCEEEEEecCCceEEEECCeEEEeCCccCC--CCCCCccchHHHHHHHHHHHHcCCC
Confidence 6788889999885 8999999999999999999999999999881 3999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCc
Q psy6977 215 LSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 215 ~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
+++|+++|+++|+.++++.|++
T Consensus 301 l~~a~~~A~~~aa~~v~~~G~~ 322 (336)
T 4du5_A 301 VPEAVKRGAWIGARAVQVLGDS 322 (336)
T ss_dssp HHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHhccCCCc
Confidence 9999999999999999999987
|
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=250.30 Aligned_cols=220 Identities=22% Similarity=0.250 Sum_probs=167.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeec--hhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVAN--LAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~--~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+++++.|+++||+++++.+ .+.+|+.+++.+++ +++|++..+ .+++..+++++++. ..++++
T Consensus 56 ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~-~g~r~~~~~~~~~a~~~l~~~~~~~----~~~~~~ 130 (338)
T 3ljs_A 56 VGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDA-HGERSFSFYRPPAADLLFRVEHFQD----ASFSDA 130 (338)
T ss_dssp ESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCS-TTCCEEEEECSSCGGGGCCGGGCCH----HHHHTE
T ss_pred EeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECC-CCCeEEEEeCCCChhHhCCHhhcCH----hHhcCC
Confidence 58899999999999999999999999886 56689999888875 567765443 36667788887763 567899
Q ss_pred eEEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++|++++.+. .+.+.+.++++.+++.| ++|+ +. +.++++++ ++|++|+..|++...
T Consensus 131 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~- 209 (338)
T 3ljs_A 131 LIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLA- 209 (338)
T ss_dssp EEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHT-
T ss_pred CEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCC-
Confidence 99999986543 34578899999999888 3333 22 22555655 999999999998732
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC---
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG--- 212 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g--- 212 (239)
.+.+++++.++++ |++.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|
T Consensus 210 --~~~~~~~~~l~~~------g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~a~~~~~l~~g~~~ 278 (338)
T 3ljs_A 210 --ADANAVIQQLWQG------RAQLLLVTDAAGPVHWYTRTAGGEVPTFRV---QVQDSNAAGDAFVGGMLYTFAQQFDD 278 (338)
T ss_dssp --SCHHHHHHHHTTT------TCCEEEEEETTEEEEEEESSCEEEECC--------------CHHHHHHHHHHHHHHCSS
T ss_pred --hhHHHHHHHHHhc------CCCEEEEeeCCCceEEEECCceEEeCCCCC---ccCCCCCccHHHHHHHHHHHHhCCCc
Confidence 1223377888774 899999999999999999999999999988 89999999999999999999999
Q ss_pred -----------CCHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 213 -----------EPLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 213 -----------~~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
.++++|+++|+++|+.++++.|++.
T Consensus 279 ~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~~Ga~~ 314 (338)
T 3ljs_A 279 AAALIDFCHDPESIVSTLRFAAAVGALAVTRQGAFT 314 (338)
T ss_dssp THHHHHHHTCHHHHHHHHHHHHHHHGGGC----CCC
T ss_pred ccchhccccChHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999999999999875
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=249.15 Aligned_cols=224 Identities=20% Similarity=0.274 Sum_probs=178.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhh---hhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAA---ANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~---~~~l~~~~i~~~~~~~~~~~ 76 (239)
+|+||+|.+|+.+++.|+++||+++++.+. +.+|+.+++.+++ +++|+++.+++. +..+++++++ ...+.+++
T Consensus 53 ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~-~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ 129 (319)
T 3lhx_A 53 VTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDS-TGERTFYYWRNEAAAKFWLASEQSA--AICEELAN 129 (319)
T ss_dssp ECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC-----CCEEEEECTTCGGGGTTSSSSHH--HHHHHHTT
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCC-CCCeeEEEecCCCHHHhccCccchh--hHHHHhcC
Confidence 578999999999999999999999998865 5589998888875 667777766542 2345544432 23467889
Q ss_pred eeEEEEeccccc-c---ChHHHHHHHHHhhhCC---CCCh---hhH-----------HHHhhHH---hcCHHHHHHHHHH
Q psy6977 77 AEYYYVSGFFLT-V---SPESILEVAKVALSCT---IRNI---NYL-----------HHRFIYL---VLIDFEALAFAKQ 132 (239)
Q Consensus 77 ~~~~~~~g~~~~-~---~~~~~~~~~~~~~~~g---~~~~---p~~-----------~~~~~~~---~~n~~E~~~l~~~ 132 (239)
+++++++|+.+. + +.+.+.++++.+++.| ++|+ +.+ .++++++ ++|.+|+..|++.
T Consensus 130 ~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~ 209 (319)
T 3lhx_A 130 FDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQ 209 (319)
T ss_dssp CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCC
T ss_pred CCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCC
Confidence 999999987654 2 2367889999999888 4444 322 2455555 8999999999875
Q ss_pred cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEE-EEeccCCCCCCcccCCCCchhhhHHHHHHHHc
Q psy6977 133 QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTT-EFPVQRLPAESVVDTNGAGDSFVGGFLSQLIK 211 (239)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~-~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~ 211 (239)
++++++++.+.++ |++.||||+|++|++++++++.+ ++|+++++..+++||+||||+|+|||++++++
T Consensus 210 -----~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~ 278 (319)
T 3lhx_A 210 -----QPVEDVIARTHNA------GVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLT 278 (319)
T ss_dssp -----CCHHHHHHHHHHT------TCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTT
T ss_pred -----CCHHHHHHHHHhc------CCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHc
Confidence 6788899999885 89999999999999999887654 88876222237999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 212 GEPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 212 g~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
|+++++|+++|+++|+.++++.|+++|
T Consensus 279 g~~~~~a~~~A~~~aa~~v~~~Ga~~~ 305 (319)
T 3lhx_A 279 GGSAENAAKRGHLTASTVIQYRGAIIP 305 (319)
T ss_dssp TCCHHHHHHHHHHHHHHHTTSSSSSCC
T ss_pred CCCHHHHHHHHHHHHHhhhccCCCcCC
Confidence 999999999999999999999999876
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=248.76 Aligned_cols=218 Identities=14% Similarity=0.169 Sum_probs=179.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCcee-Eeec-hhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARS-LVAN-LAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~-~~~~-~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++.+++ +++|+ .+.. .++...++++++.. ..++++
T Consensus 57 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~-~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~ 131 (330)
T 3iq0_A 57 ISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHN-SGDRDFIFNIKNAACGKLSAQHVDE----NILKDC 131 (330)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC----CEEEEECTTSGGGGCCGGGCCG----GGGTTE
T ss_pred EEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECC-CCCeeEEEeccCChhhhCCHhhCCH----hHhccC
Confidence 47899999999999999999999999986 45699999888876 56663 3332 34566677777764 578899
Q ss_pred eEEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hhH----------HHHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 78 EYYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NYL----------HHRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 78 ~~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~~----------~~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
++++++|+.+. .+.+.+.++++.+++.| ++|+ +.+ .++++++ ++|++|+..|++.
T Consensus 132 ~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~---- 207 (330)
T 3iq0_A 132 THFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPH---- 207 (330)
T ss_dssp EEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCSC----
T ss_pred CEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhCC----
Confidence 99999998761 23466889999999888 4444 321 2455555 9999999988765
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHH
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLS 216 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~ 216 (239)
++++++++.+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|++++
T Consensus 208 -~~~~~~~~~l~~~------g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~ 277 (330)
T 3iq0_A 208 -STPERAIAGFLEE------GVKEVIVKRGNQGASYYSANEQFHVESYPV---EEVDPTGAGDCFGGAWIACRQLGFDAH 277 (330)
T ss_dssp -SSHHHHHHHHHHH------TCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred -CCHHHHHHHHHHc------CCCEEEEEeCCCceEEEECCceEEecCCCC---ccCCCCChHHHHHHHHHHHHHcCCCHH
Confidence 6788888888885 899999999999999999888999999988 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCcC
Q psy6977 217 VCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 217 ~a~~~a~~~a~~~~~~~G~~~ 237 (239)
+|+++|+++|+.++++.|++.
T Consensus 278 ~a~~~A~~~aa~~v~~~G~~~ 298 (330)
T 3iq0_A 278 RALQYANACGALAVTRRGPME 298 (330)
T ss_dssp HHHHHHHHHHHHHTTSCSSST
T ss_pred HHHHHHHHHHHHHHcCcCCCC
Confidence 999999999999999999864
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=245.64 Aligned_cols=213 Identities=18% Similarity=0.109 Sum_probs=182.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++ +++|+++.+.+++..++++++.. +.+.++++
T Consensus 86 i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~-~g~r~~~~~~~~~~~~~~~~l~~----~~l~~~~~ 160 (343)
T 2rbc_A 86 WGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDN-RGERLIVPFYDHRLHEKKRACTP----EDIALFDA 160 (343)
T ss_dssp ECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECT-TSCEEEEEECCGGGGSSCCCCCH----HHHTTCSE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECC-CCCEEEEEcCCCcccCChhHhcH----hhhCCCCE
Confidence 57899999999999999999999999886 45689999988876 67788776777766777766642 56789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h---hHHH-HhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N---YLHH-RFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p---~~~~-~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++++++. ++.+..+++.+++.+ ++|+ + .+.+ +++++ ++|++|+..|++. ++++++++.+.
T Consensus 161 v~~~~~~----~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----~~~~~~~~~l~ 231 (343)
T 2rbc_A 161 VLVDVRW----PELALDVLTVARALGKPAILDGDVAPVETLEGLAPAATHIVFSEPAATRLTGL-----ETVKDMLPVLH 231 (343)
T ss_dssp EEECSSS----HHHHHHHHHHHHHTTCCEEEEECSCCHHHHHHHGGGCSEEEEEHHHHHHHHCC-----SSHHHHHHHHH
T ss_pred EEEcCCC----HHHHHHHHHHHHHCCCEEEEECCccccccHHHHHhcCCEEEeCHHHHHHHcCC-----CCHHHHHHHHH
Confidence 9998754 367888899998887 6666 3 3445 77776 9999999999875 57888888888
Q ss_pred cCCCCCCCCc-eEEEEeeCCCcEEEEECC--eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRE-RITIITQGDKPIILSQNG--KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 149 ~~~~~~~~g~-~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
++ |+ +.||||+|++|+++++++ +.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 232 ~~------g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~ 302 (343)
T 2rbc_A 232 AR------YPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQV---EAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVA 302 (343)
T ss_dssp HH------STTSEEEEECGGGCEEEECTTCCCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred Hh------CCCceEEEEECCcceEEEeCCCceeEEecCCCC---ccccCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 85 88 999999999999999887 7888999887 799999999999999999999999999999999999
Q ss_pred HHHHHHhccCc
Q psy6977 226 AQHIIQVSGCT 236 (239)
Q Consensus 226 a~~~~~~~G~~ 236 (239)
|+.++++.|++
T Consensus 303 aa~~v~~~G~~ 313 (343)
T 2rbc_A 303 AALKCTVFGGR 313 (343)
T ss_dssp HHHHHTSSSGG
T ss_pred HHHHhCCCCCc
Confidence 99999999986
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=245.07 Aligned_cols=218 Identities=21% Similarity=0.243 Sum_probs=179.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhh---ccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAAN---LFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~---~l~~~~i~~~~~~~~~~~ 76 (239)
+|+||+|.+|+.+++.|+++||+++++.+. +.+|+.+++.++ +++|+++.+++... .++..++ ..+.+++
T Consensus 72 ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~--~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 145 (328)
T 4e69_A 72 FSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE--QGERSFAYWRGQSAARELAGDADA----LAAAMAR 145 (328)
T ss_dssp ECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE--TTEEEEEEECTTCGGGGTTSCHHH----HHHHHTT
T ss_pred EEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec--CCceEEEEeCCCCHHHhhcCcccc----chHHhcC
Confidence 578999999999999999999999998864 558999888887 67787776655322 1222111 1267889
Q ss_pred eeEEEEeccccc----cChHHHHHHHHHhhhCC---CCCh---hhH-----------HHHhhHH---hcCHHHHHHHHHH
Q psy6977 77 AEYYYVSGFFLT----VSPESILEVAKVALSCT---IRNI---NYL-----------HHRFIYL---VLIDFEALAFAKQ 132 (239)
Q Consensus 77 ~~~~~~~g~~~~----~~~~~~~~~~~~~~~~g---~~~~---p~~-----------~~~~~~~---~~n~~E~~~l~~~ 132 (239)
+++++++|+.+. .+.+.+.++++.+++.+ ++|+ |.+ .++++++ ++|++|+..|++.
T Consensus 146 ~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 225 (328)
T 4e69_A 146 ADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGD 225 (328)
T ss_dssp CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTC
T ss_pred CCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCC
Confidence 999999987553 23467788899998888 4444 322 2555555 8999999999976
Q ss_pred cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccC-CCCCCcccCCCCchhhhHHHHHHHHc
Q psy6977 133 QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQR-LPAESVVDTNGAGDSFVGGFLSQLIK 211 (239)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-~~~~~vvdt~GaGDaf~ag~~~~l~~ 211 (239)
++++++++.+.++ |++.||||+|++|++++++++.+++|+++ + +++||+||||+|+|||++++++
T Consensus 226 -----~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvdttGAGDaf~a~~~~~l~~ 291 (328)
T 4e69_A 226 -----AGPDATADRYARA------GVRSVVVKNGPHAVHFLQDGRRGRVPVPPVA---QVVDTTAAGDSFNAGLLDSVLA 291 (328)
T ss_dssp -----SSHHHHHHHHHTT------TCSEEEEBCTTSCEEEEETTEEEEECCCCCC---SCCCCTTHHHHHHHHHHHHHHT
T ss_pred -----CCHHHHHHHHHhc------CCCEEEEEeCCCCeEEEeCCceEEecCCCCC---CccCCCChhHHHHHHHHHHHHC
Confidence 5888899998885 89999999999999999999888988875 5 8999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 212 GEPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 212 g~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
|+++++|+++|+++|+.++++.|+++|
T Consensus 292 g~~l~~a~~~A~~~aa~~v~~~Ga~~p 318 (328)
T 4e69_A 292 GQPLETAIAAAAALAGQVVQGKGALVE 318 (328)
T ss_dssp TCCHHHHHHHHHHHHHHHHTSSSSSCC
T ss_pred CCCHHHHHHHHHHHHHHHHccCCCcCC
Confidence 999999999999999999999999987
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=243.15 Aligned_cols=221 Identities=20% Similarity=0.247 Sum_probs=184.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++ +++|+++.+++++..+++++++. ..+.++.+++
T Consensus 61 ~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~-~g~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ 137 (309)
T 1rkd_A 61 IACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNG-EGENVIGIHAGANAALSPALVEA--QRERIANASA 137 (309)
T ss_dssp EEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECT-TSCEEEEEECGGGGGCCHHHHHT--THHHHHHCSE
T ss_pred EEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECC-CCCeEEEEeCCchhcCCHHHHHH--HHHhcccCCE
Confidence 47899999999999999999999999886 46699999998876 57777777777777777766543 2246788999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h--h-HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N--Y-LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p--~-~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+++++ ..+.+.+..+++.+++.| ++|+ + . ..++++++ ++|++|+..|++....+.++++++++.+.+
T Consensus 138 v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 214 (309)
T 1rkd_A 138 LLMQL---ESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHE 214 (309)
T ss_dssp EEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCCCCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHH
T ss_pred EEEeC---CCCHHHHHHHHHHHHHcCCEEEEECCccccchHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 99964 355688889999999888 5666 2 2 23666665 999999999998633233557777888887
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+ |++.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 215 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~ 285 (309)
T 1rkd_A 215 K------GIRTVLITLGSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIA 285 (309)
T ss_dssp T------TCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred h------CCCEEEEEECCCcEEEEeCCceEEcCCCCC---CcCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 899999999999999999888889998887 7999999999999999999999999999999999999999
Q ss_pred HHhccCc
Q psy6977 230 IQVSGCT 236 (239)
Q Consensus 230 ~~~~G~~ 236 (239)
+++.|++
T Consensus 286 ~~~~G~~ 292 (309)
T 1rkd_A 286 VTRKGAQ 292 (309)
T ss_dssp HTSSSSG
T ss_pred cCCCCcc
Confidence 9999986
|
| >3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=242.79 Aligned_cols=225 Identities=17% Similarity=0.144 Sum_probs=183.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc-hhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP-ENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~ 79 (239)
+|.||+| +|+.+++.|+++||+++++.+.+ +|+.+.+++...+++++++...++ .+++++++.. +..+.+..+++
T Consensus 58 i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 133 (309)
T 3umo_A 58 IFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAI 133 (309)
T ss_dssp EEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTCE
T ss_pred EEEecCc-hHHHHHHHHHHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCCE
Confidence 4789999 99999999999999999998754 566666666654678887766654 3555444210 11122467889
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhhH--H---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFIY--L---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~~--~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++++|+.+. .+.+.+.++++.+++.| ++|+ +.+.+++++ + ++|++|+..|++....+.+++.++++.+.
T Consensus 134 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~ 213 (309)
T 3umo_A 134 LVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIV 213 (309)
T ss_dssp EEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCHHHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHH
T ss_pred EEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCcHHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 999997553 66788999999999988 6777 455566654 2 99999999999875445567888888888
Q ss_pred cCCCCCCCCc-eEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRE-RITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227 (239)
Q Consensus 149 ~~~~~~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~ 227 (239)
++ |. +.|+||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+
T Consensus 214 ~~------g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~A~~~aa 284 (309)
T 3umo_A 214 NS------GKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGS 284 (309)
T ss_dssp HT------TSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred Hc------CCCcEEEEEcCcccEEEEECCcEEEEeCCCc---CCCCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 85 65 8999999999999999988899999887 89999999999999999999999999999999999999
Q ss_pred HHHHhccCcCC
Q psy6977 228 HIIQVSGCTLG 238 (239)
Q Consensus 228 ~~~~~~G~~~~ 238 (239)
.++++.|+++|
T Consensus 285 ~~v~~~G~~~~ 295 (309)
T 3umo_A 285 AATLNQGTRLC 295 (309)
T ss_dssp HHTTSSTTCCC
T ss_pred HHhcCCCCCCC
Confidence 99999999865
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=243.03 Aligned_cols=217 Identities=16% Similarity=0.160 Sum_probs=178.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeech--hh-hhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANL--AA-ANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~--~~-~~~l~~~~i~~~~~~~~~~~ 76 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++.++. +++++++.+. ++ +..+++++++. ..+++
T Consensus 61 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~-~g~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~ 135 (319)
T 3pl2_A 61 LSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFP-PDDFPLYFYREPKAPDLNIESADVSL----DDVRE 135 (319)
T ss_dssp EEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBT-TTBCCEEEECCSCCGGGGCCGGGSCH----HHHHH
T ss_pred EEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcC-CCCeeEEEecCCCcccccCChhhCCH----HHhcc
Confidence 47899999999999999999999999885 56689988877765 5566555442 33 56777777653 67789
Q ss_pred eeEEEEeccccccC--hHHHHHHHHHhhhCC--CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 77 AEYYYVSGFFLTVS--PESILEVAKVALSCT--IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 77 ~~~~~~~g~~~~~~--~~~~~~~~~~~~~~g--~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
++++|++|+.+... .+....+++.+++.+ ++|+ +. +.++++++ ++|++|+..|++.
T Consensus 136 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~--- 212 (319)
T 3pl2_A 136 ADILWFTLTGFSEEPSRGTHREILTTRANRRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGE--- 212 (319)
T ss_dssp CSEEEEEGGGGSSTTHHHHHHHHHHHHTTCSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSC---
T ss_pred CCEEEEecccccCchhHHHHHHHHHHHHHCCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCC---
Confidence 99999999865532 245667777777655 3332 22 22556655 9999999999975
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCH
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~ 215 (239)
++++++++.+.++ |++.|+||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++
T Consensus 213 --~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~ 281 (319)
T 3pl2_A 213 --TEPERAGRALLER------GVELAIVKQGPKGVMAMTKDETVEVPPFFV---DVINGLGAGDAFGGALCHGLLSEWPL 281 (319)
T ss_dssp --CSHHHHHHHHHHT------TCSEEEEEEETTEEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred --CCHHHHHHHHHhc------CCCEEEEEECCCCeEEEECCceEEeCCccc---CCCCCcCchHHHHHHHHHHHHcCCCH
Confidence 6788888888885 899999999999999999888999999988 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCc
Q psy6977 216 SVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~~ 236 (239)
++|+++|+++|+.++++.|++
T Consensus 282 ~~a~~~A~~~aa~~v~~~G~~ 302 (319)
T 3pl2_A 282 EKVLRFANTAGALVASRLECS 302 (319)
T ss_dssp HHHHHHHHHHHHHHHTSSCSG
T ss_pred HHHHHHHHHHHHHHHhccCCc
Confidence 999999999999999999986
|
| >4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=249.93 Aligned_cols=225 Identities=15% Similarity=0.107 Sum_probs=177.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeec-hhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVAN-LAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||++..+...+.+|+.++++++. ++++..+.. .+.+..+.++.+ ....+.++++++
T Consensus 113 ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~ 189 (352)
T 4e84_A 113 LCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLAR-QQQLLRVDFEAMPTHEVLLAGL--ARFDVLLPQHDV 189 (352)
T ss_dssp EEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEES-SCEEEEEEECCCCCHHHHHHHH--HHHHHHGGGCSE
T ss_pred EEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcC-CceEEEEEcCCCCCHHHHHHHH--HHHHHhcccCCE
Confidence 5789999999999999999999996665666799999888875 444433322 222111111111 122367889999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCCC
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLPK 152 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~ 152 (239)
++++|+.. .+.+.+.++++.+++.| ++|+ +..+++++++ ++|++|++.|++ ...+.+++.++++.+.+.
T Consensus 190 v~~~g~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l~~~-- 265 (352)
T 4e84_A 190 VLMSDYAK-GGLTHVTTMIEKARAAGKAVLVDPKGDDWARYRGASLITPNRAELREVVG-QWKSEDDLRARVANLRAE-- 265 (352)
T ss_dssp EEEECCSS-SSCSSHHHHHHHHHHTTCEEEEECCSSCCSTTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHHHHH--
T ss_pred EEEeCCCC-CCHHHHHHHHHHHHhcCCEEEEECCCcchhhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHHHHH--
Confidence 99998653 23344788999999888 6777 5555566665 999999999998 333445677777777642
Q ss_pred CCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 153 QNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 153 ~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
.|++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.++++
T Consensus 266 ---~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v---~vvDttGAGDaF~ag~l~~l~~g~~l~~al~~A~aaaa~~v~~ 339 (352)
T 4e84_A 266 ---LDIDALLLTRSEEGMTLFSAGGELHAPALAR---EVFDVSGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVGK 339 (352)
T ss_dssp ---HTCSEEEEECGGGCEEEEETTEEEEECCCCS---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred ---hCCCEEEEEcCCCcEEEEECCceEEecCCCc---CccCCccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC
Confidence 2889999999999999999999999999988 8999999999999999999999999999999999999999999
Q ss_pred ccCcCC
Q psy6977 233 SGCTLG 238 (239)
Q Consensus 233 ~G~~~~ 238 (239)
.|++.+
T Consensus 340 ~Ga~~~ 345 (352)
T 4e84_A 340 LGTATV 345 (352)
T ss_dssp SSSCCC
T ss_pred CCCccC
Confidence 999865
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-36 Score=247.33 Aligned_cols=225 Identities=10% Similarity=0.083 Sum_probs=181.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeec----hhhhhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVAN----LAAANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~----~~~~~~l~~~~i~~~~~~~~~~~ 76 (239)
+|+||+|.+|+.+++.|+++||+++++.+.+.+|+.+++.++. +++++++.+ .++...+++++++ +.+.+++
T Consensus 54 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~a~~~l~~~~~~---~~~~~~~ 129 (346)
T 3ktn_A 54 ITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGY-GIRPTQVTYQNRHQSAFGISEAKDYD---FEAFLAE 129 (346)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCB-TTBCCEEEECCCTTSTTTTCCGGGSC---HHHHHTT
T ss_pred EEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecC-CCCCceEEecCCCCChhhhCChhhcC---hHHHhCC
Confidence 5789999999999999999999999998766789888877653 555555544 3455667777665 2267889
Q ss_pred eeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---hh-------------HHHHhhHH---hcCHHHHHHHHH
Q psy6977 77 AEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---NY-------------LHHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 77 ~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p~-------------~~~~~~~~---~~n~~E~~~l~~ 131 (239)
++++|++|+.+..++ +.+.++++.+++.| ++|+ +. +.++++++ ++|++|+..|++
T Consensus 130 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g 209 (346)
T 3ktn_A 130 VDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLG 209 (346)
T ss_dssp CSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSC
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhC
Confidence 999999998764433 67889999999888 3333 21 22566665 999999999987
Q ss_pred Hc-CC---CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-------EEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 132 QQ-NF---QTEDLHAIALKISNLPKQNPNRERITIITQGDKP-------IILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 132 ~~-~~---~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-------~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
.. .. +.++++++++.+.++ .|++.||||+|++| ++++++++.+++|++++ +++||+||||+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~l~~~-----~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGDa 281 (346)
T 3ktn_A 210 FIPREDLEGEAQETELIQRFMSQ-----YNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPL---LNLDRIGAGDA 281 (346)
T ss_dssp CCCCTTSCHHHHHHHHHHHHHHH-----HTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEEC---CCSCCTTHHHH
T ss_pred CCCCccccchHHHHHHHHHHHHh-----cCCCEEEEecCccccccCcceEEEEECCceEEeCCCcc---ccCCCCchhHH
Confidence 63 11 123567777777763 28899999999998 88888888899999988 79999999999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
|+|||+++|++|+++++|+++|+++|+.++++.|++.
T Consensus 282 F~ag~~~~l~~g~~l~~a~~~A~a~aa~~v~~~G~~~ 318 (346)
T 3ktn_A 282 YAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIP 318 (346)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCC
Confidence 9999999999999999999999999999999999863
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=243.74 Aligned_cols=221 Identities=16% Similarity=0.187 Sum_probs=179.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeE-eechhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSL-VANLAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~-~~~~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++ +++|++ +.+++....++++.++ ...+.+..++
T Consensus 62 i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 138 (328)
T 3kzh_A 62 MSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDE-NGEMVSAIADMKSIGAMNTDFID--SKREIFENAE 138 (328)
T ss_dssp ECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECT-TSCEEEEEEECGGGGGCCHHHHH--HTHHHHHTCS
T ss_pred EEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcC-CCCEEEEEEchhhhhhCCHHHHH--HHHHhhccCC
Confidence 57899999999999999999999998875 46689999998886 566765 3445555556554432 1236778999
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC---CCCh-hh-----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT---IRNI-NY-----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~-----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
++++++.. + +.+..+++ +++.+ ++|+ +. +.++++++ ++|++|+..|++....+.++++++++.
T Consensus 139 ~~~~~~~~---~-~~~~~l~~-a~~~~~~v~~D~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~ 213 (328)
T 3kzh_A 139 YTVLDSDN---P-EIMEYLLK-NFKDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNY 213 (328)
T ss_dssp EEEEESSC---H-HHHHHHHH-HHTTTSEEEEECCSHHHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHH
T ss_pred EEEEeCCc---H-HHHHHHHH-HhhcCCcEEEEeCCHHHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHH
Confidence 99998643 3 66777777 66677 5565 21 22555665 999999999998644344677788888
Q ss_pred HhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHH
Q psy6977 147 ISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226 (239)
Q Consensus 147 l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a 226 (239)
+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|
T Consensus 214 l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~a 284 (328)
T 3kzh_A 214 FLGL------GIKKVFISLDADGIFYNDGVSCGKIKATEV---DVKNVTGAGDSFVAGLGYGYMNKMPIEDIVKFAMTMS 284 (328)
T ss_dssp HHHH------TCCEEEEECGGGCEEEECSSCEEEEEESSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHh------CCCEEEEEeCCCCEEEEeCCceEEecCCCc---ccCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 8874 899999999999999999888899999988 7999999999999999999999999999999999999
Q ss_pred HHHHHhccCcCC
Q psy6977 227 QHIIQVSGCTLG 238 (239)
Q Consensus 227 ~~~~~~~G~~~~ 238 (239)
+.++++.|+..+
T Consensus 285 a~~v~~~G~~~~ 296 (328)
T 3kzh_A 285 NITISHEETIHP 296 (328)
T ss_dssp HHHHTSSSSSCT
T ss_pred HHHhcCCCCCCC
Confidence 999999998864
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=244.50 Aligned_cols=222 Identities=20% Similarity=0.247 Sum_probs=183.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++ +++|+++.+++++..+++++++. ..+.+..+++
T Consensus 81 i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~-~g~~~~~~~~ga~~~l~~~~~~~--~~~~l~~~~~ 157 (331)
T 2fv7_A 81 VCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNN-EGQNIIVIVAGANLLLNTEDLRA--AANVISRAKV 157 (331)
T ss_dssp EEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECT-TSCEEEEEECGGGGGCCHHHHHH--THHHHHHCSE
T ss_pred EEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECC-CCCeEEEecCCccccCCHHHHHH--HHHhhccCCE
Confidence 57899999999999999999999999886 46689999988875 57787777777777777665532 1245778999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hh----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NY----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
+++++ ..+.+.+..+++.+++.+ ++|+ +. ..++++++ ++|++|+..|++....+.++++++++.+.
T Consensus 158 v~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~ 234 (331)
T 2fv7_A 158 MVCQL---EITPATSLEALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLL 234 (331)
T ss_dssp EEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCCTTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHH
T ss_pred EEEec---CCCHHHHHHHHHHHHHcCCEEEEeCCcccccchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHH
Confidence 99964 345688889999999888 5666 32 22666665 99999999999863333356777888888
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECC--eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC--CCHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNG--KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG--EPLSVCIECGVW 224 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g--~~~~~a~~~a~~ 224 (239)
++ |++.||||+|++|+++++++ +.++++++++ +++||+||||+|+|||++++++| +++++|+++|++
T Consensus 235 ~~------g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~~~a~~~A~~ 305 (331)
T 2fv7_A 235 KR------GCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNF 305 (331)
T ss_dssp TT------TCSEEEEECGGGCEEEEESSCCSCEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHH
T ss_pred Hc------CCCEEEEEECCCceEEEECCCCceeEecCCCC---ccCCCCCchHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 74 89999999999999998887 7888888887 79999999999999999999999 999999999999
Q ss_pred HHHHHHHhccCcC
Q psy6977 225 AAQHIIQVSGCTL 237 (239)
Q Consensus 225 ~a~~~~~~~G~~~ 237 (239)
+|+.++++.|++.
T Consensus 306 ~aa~~v~~~G~~~ 318 (331)
T 2fv7_A 306 IAAVSVQAAGTQS 318 (331)
T ss_dssp HHHHHHTSSSGGG
T ss_pred HHHHHhCCCCCcc
Confidence 9999999999853
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=239.94 Aligned_cols=216 Identities=19% Similarity=0.211 Sum_probs=178.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCc--eeEeec--hhhhhccCCCCCCCchhhhccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKA--RSLVAN--LAAANLFTPDHLHVPENNKLIQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~--r~~~~~--~~~~~~l~~~~i~~~~~~~~~~ 75 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++.+++ +++ |+++.+ .+++..+++++++. ..++
T Consensus 53 ~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~-~g~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~ 127 (311)
T 2dcn_A 53 IAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHY-PVPLKSESIYYRKGSAGSKLSPEDVDE----EYVK 127 (311)
T ss_dssp ECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESC-SSTTCEEEEEECTTCTGGGCCGGGCCH----HHHT
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECC-CCCccceEEEecCcChhhhCChhhcCh----HHHc
Confidence 58899999999999999999999999886 45689998888775 455 665543 35567788777653 5678
Q ss_pred ceeEEEEeccccc---cChHHHHHHHHHhhhCCCCCh-------------hhHHHHhh--HH---hcCHHHHHHHHHHcC
Q psy6977 76 NAEYYYVSGFFLT---VSPESILEVAKVALSCTIRNI-------------NYLHHRFI--YL---VLIDFEALAFAKQQN 134 (239)
Q Consensus 76 ~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~g~~~~-------------p~~~~~~~--~~---~~n~~E~~~l~~~~~ 134 (239)
+++++|++|+.+. .+.+.+.++++.+++. ++|+ +.+.++++ ++ ++|++|+..|++.
T Consensus 128 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~-~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~-- 204 (311)
T 2dcn_A 128 SADLVHSSGITLAISSTAKEAVYKAFEIASNR-SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILGE-- 204 (311)
T ss_dssp TCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE-EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSC--
T ss_pred CCCEEEEeCcccccChHHHHHHHHHHHHHHHh-CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCC--
Confidence 9999999987653 3346777888887754 3332 12336777 66 9999999999875
Q ss_pred CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC
Q psy6977 135 FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP 214 (239)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~ 214 (239)
++++++++.+.+ . ++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|++
T Consensus 205 ---~~~~~~~~~l~~------~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~ 271 (311)
T 2dcn_A 205 ---SDPDKAAKAFSD------Y-AEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGFE 271 (311)
T ss_dssp ---CCHHHHHHHHTT------T-EEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTCC
T ss_pred ---CCHHHHHHHHHH------h-CCEEEEEECCCCcEEEeCCcEEEeCCccc---cccCCCCchHHHHHHHHHHHHcCCC
Confidence 678888888877 4 68999999999999999888889999988 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCcC
Q psy6977 215 LSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 215 ~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
+++|+++|+++|+.++++.|++.
T Consensus 272 ~~~a~~~a~~~aa~~v~~~G~~~ 294 (311)
T 2dcn_A 272 MEKALDYAIVASTLNVMIRGDQE 294 (311)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSST
T ss_pred HHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999874
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=250.13 Aligned_cols=217 Identities=17% Similarity=0.210 Sum_probs=167.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++..+ +++|+++.+++++..++++++.. +.++++++
T Consensus 74 ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~--~g~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~ 147 (327)
T 3hj6_A 74 ISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS--TRTPDWLPYREADMYLQEDDIIF----ELIKRSKV 147 (327)
T ss_dssp ECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC--TTCCCEEEECSGGGGCCSCCCHH----HHHC--CE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec--CCCccEEEecChhhhCChhhcCH----hHhccCCE
Confidence 57899999999999999999999999885 4568877665543 56777777777778887766542 57889999
Q ss_pred EEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCCCc
Q psy6977 80 YYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNFQT 137 (239)
Q Consensus 80 ~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~~~ 137 (239)
+|++|+.+. .+.+.+.++++.+++.| ++|+ +. +.++++++ ++|++|+..|++.
T Consensus 148 v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~----- 222 (327)
T 3hj6_A 148 FHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP----- 222 (327)
T ss_dssp EEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT-----
T ss_pred EEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----
Confidence 999986543 34578889999999988 4444 32 22555655 9999999999986
Q ss_pred cCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHH
Q psy6977 138 EDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSV 217 (239)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~ 217 (239)
++++++++.++++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++
T Consensus 223 ~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~ 293 (327)
T 3hj6_A 223 DSPENYVKRYLEL------GVKAVILTLGEEGVIASDGEEIIRIPAFSE---DAVDVTGAGDAFWSGFICGLLDGYTVKR 293 (327)
T ss_dssp SCSSGGGGGGTTT------TCSEEEEECSTTCEEEECSSCEEESCSSTT---C-----CCHHHHHHHHHHTTSSCSTTHH
T ss_pred CCHHHHHHHHHhC------CCCEEEEEECCCceEEEeCCeeEEcCCccc---ccCCCcChhHHHHHHHHHHHHcCCCHHH
Confidence 4455566666653 899999999999999999888999999987 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCcC
Q psy6977 218 CIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 218 a~~~a~~~a~~~~~~~G~~~ 237 (239)
|+++|+++|+.++++.|++.
T Consensus 294 a~~~A~a~aa~~v~~~G~~~ 313 (327)
T 3hj6_A 294 SIKLGNGVAAFKIRGVGALS 313 (327)
T ss_dssp HHHHHHCCCSSCC-------
T ss_pred HHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999864
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-35 Score=239.20 Aligned_cols=217 Identities=18% Similarity=0.231 Sum_probs=177.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEE--EecCCCceeEeech--hhhhccCCCCCCCchhhhccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVL--ITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~--~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~ 75 (239)
+|+||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++. +++ +++|.++.+. +++..+++++++. ..++
T Consensus 53 i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~-~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~ 127 (313)
T 2v78_A 53 IARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPI-PMKSELVYYRKGSAGSRLSPEDINE----NYVR 127 (313)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSS-TTCEEEEEECTTCSGGGCCGGGCCH----HHHH
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCC-CCCeeEEEeCCcChhHhCChhhCCH----HHhc
Confidence 47899999999999999999999999886 45689998887 665 5566655443 4567788777763 5678
Q ss_pred ceeEEEEeccccc---cChHHHHHHHHHhhhCCCCCh---h-----------hHHHHhh-----HHhcCHHHHHHHHHHc
Q psy6977 76 NAEYYYVSGFFLT---VSPESILEVAKVALSCTIRNI---N-----------YLHHRFI-----YLVLIDFEALAFAKQQ 133 (239)
Q Consensus 76 ~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~g~~~~---p-----------~~~~~~~-----~~~~n~~E~~~l~~~~ 133 (239)
+++++|++|+.+. .+.+.+.++++.+++. ++|+ + .+.++++ .+++|++|+..|++.
T Consensus 128 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~-~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~- 205 (313)
T 2v78_A 128 NSRLVHSTGITLAISDNAKEAVIKAFELAKSR-SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDV- 205 (313)
T ss_dssp TSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE-EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSC-
T ss_pred CCCEEEEcCchhhcChHHHHHHHHHHHHHHHh-CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCC-
Confidence 9999999987653 3346777788877654 2332 1 1223444 348999999999875
Q ss_pred CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC
Q psy6977 134 NFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213 (239)
Q Consensus 134 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~ 213 (239)
++++++++.+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+
T Consensus 206 ----~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~ 272 (313)
T 2v78_A 206 ----TDPDEAYRKYKEL------GVKVLLYKLGSKGAIAYKDNVKAFKDAYKV---PVEDPTGAGDAMAGTFVSLYLQGK 272 (313)
T ss_dssp ----CCHHHHHHHHHHT------TEEEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred ----CCHHHHHHHHHhC------CCCEEEEEECCCCcEEeeCCcEEEeCCCcC---CccCCCCchHHHHHHHHHHHHcCC
Confidence 6788888888885 899999999999999998888889999887 799999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 214 PLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 214 ~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
++++|+++|+++|+.++++.|++.
T Consensus 273 ~~~~a~~~a~~~aa~~v~~~G~~~ 296 (313)
T 2v78_A 273 DIEYSLAHGIAASTLVITVRGDNE 296 (313)
T ss_dssp CHHHHHHHHHHHHHHHHTSSSSST
T ss_pred CHHHHHHHHHHHHHHHhccCCCCC
Confidence 999999999999999999999874
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=236.01 Aligned_cols=221 Identities=19% Similarity=0.224 Sum_probs=173.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC--CCCceeEEEEEecCCCceeEeech--hhhhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD--TEPTGTCAVLITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~--~~~t~~~~~~~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~~ 76 (239)
+|.||+|.+|+++++.|+++||+++++.+. +.+|+.+++.++. ++.+.++.+. +++..+++++++. ..+++
T Consensus 64 i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~-~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~ 138 (332)
T 2qcv_A 64 IGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKS-PEECSILMYRQDVADLYLSPEEVNE----AYIRR 138 (332)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEE-TTEEEEEEECTTCGGGGCCGGGCCH----HHHTT
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcC-CCCccEEEECCcchhhhCCHhHCCH----HHHcc
Confidence 478999999999999999999999998764 3488888877665 3444443333 3556777777653 45789
Q ss_pred eeEEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hhH-----------HHHhhHH---hcCHHHHHHHHHHcC
Q psy6977 77 AEYYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NYL-----------HHRFIYL---VLIDFEALAFAKQQN 134 (239)
Q Consensus 77 ~~~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~~-----------~~~~~~~---~~n~~E~~~l~~~~~ 134 (239)
++++|++|+.+. .+.+.+..+++.+++.| ++|+ +.+ .++++++ ++|++|+..|++...
T Consensus 139 ~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~ 218 (332)
T 2qcv_A 139 SKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTE 218 (332)
T ss_dssp EEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSS
T ss_pred CCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCc
Confidence 999999998654 23477888999999888 4444 221 2456665 999999999987522
Q ss_pred CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC
Q psy6977 135 FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213 (239)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~ 213 (239)
.++..+.++.++++ |++.||||+|++|++++++ ++.++++++++ +++||+||||+|+|||++++++|+
T Consensus 219 --~~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvdt~GAGDaf~a~~~~~l~~g~ 287 (332)
T 2qcv_A 219 --KGDNDETIRYLFKH------SPELIVIKHGVEGSFAYTKAGEAYRGYAYKT---KVLKTFGAGDSYASAFLYALISGK 287 (332)
T ss_dssp --CCCHHHHHHHHTTS------SCSEEEEECGGGCEEEEETTSCEEEECCBCC---CCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred --CCCHHHHHHHHHHc------CCCEEEEEECCcceEEEecCCceEEcCCCCc---cccCCCCcHHHHHHHHHHHHHcCC
Confidence 24567778888774 8999999999999999988 66888998887 799999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 214 PLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 214 ~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
++++|+++|+++|+.++++.|++.
T Consensus 288 ~~~~a~~~A~~~aa~~v~~~G~~~ 311 (332)
T 2qcv_A 288 GIETALKYGSASASIVVSKHSSSD 311 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHHHHccCCCcc
Confidence 999999999999999999999863
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-35 Score=238.44 Aligned_cols=222 Identities=17% Similarity=0.247 Sum_probs=175.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEee-chhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVA-NLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~-~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+++++.|+++||+++++...+.+|+.+++++++ +++|+++. ..+.+..++++.++.....+.+..+++
T Consensus 59 i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (317)
T 2nwh_A 59 IAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILER-DGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDF 137 (317)
T ss_dssp ECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECT-TSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcC-CCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCE
Confidence 5889999999999999999999999955566799999998876 56666543 334455566654443111146788999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h-h----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N-Y----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKI 147 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p-~----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l 147 (239)
+++++ .++.+.+..+++.+++.+ ++|+ + . +.++++++ ++|++|+..|++. +.++++++++.+
T Consensus 138 v~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~---~~~~~~~~~~~l 211 (317)
T 2nwh_A 138 LLCDA---NLPEDTLTALGLIARACEKPLAAIAISPAKAVKLKAALGDIDILFMNEAEARALTGE---TAENVRDWPNIL 211 (317)
T ss_dssp EEEET---TSCHHHHHHHHHHHHHTTCCEEEECCSHHHHGGGTTTGGGCSEEEEEHHHHHHHHC--------CTTHHHHH
T ss_pred EEEeC---CCCHHHHHHHHHHHHhcCCeEEEeCCCHHHHHHHHHHhhhCeEecCCHHHHHHHhCC---ChhHHHHHHHHH
Confidence 99964 346788899999999888 5565 2 1 22555655 9999999999875 234556677778
Q ss_pred hcCCCCCCCCceEEEEeeCCCcEEEEECC-eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHH
Q psy6977 148 SNLPKQNPNRERITIITQGDKPIILSQNG-KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226 (239)
Q Consensus 148 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~~-~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a 226 (239)
.++ |++.||||+|++|+++++++ ..++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|
T Consensus 212 ~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~a 282 (317)
T 2nwh_A 212 RKA------GLSGGVVTRGASEVVAFNGTEKAILHPPLIR---EVKDVTGAGDAMASGYLAAIAEGKTIREALRQGAAAA 282 (317)
T ss_dssp HHT------TCCCEEEEETTTEEEEECSSCEEEECCCCSS---SCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHc------CCCEEEEEECCCcEEEEcCCCceEEeCCCCc---cccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 774 89999999999999998766 4678888887 8999999999999999999999999999999999999
Q ss_pred HHHHHhccCcCC
Q psy6977 227 QHIIQVSGCTLG 238 (239)
Q Consensus 227 ~~~~~~~G~~~~ 238 (239)
+.++++.|++.+
T Consensus 283 a~~v~~~G~~~~ 294 (317)
T 2nwh_A 283 AITVQSSFATSQ 294 (317)
T ss_dssp HHHHSSTTCCGG
T ss_pred HHHHcCCCCCCC
Confidence 999999998753
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=238.32 Aligned_cols=204 Identities=21% Similarity=0.236 Sum_probs=175.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+.+++.|+++||+++++...+.+|+.+++++++ +++|+++.+++++..+++++++. ..+.++.++++
T Consensus 59 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~-~g~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~~v 135 (299)
T 3ikh_A 59 IAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSA-DGDNAIITTTAAADTFSLDEMIP--HMADAVAGDIL 135 (299)
T ss_dssp ECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSS-SCSCEEEEECHHHHHCCHHHHGG--GGTTCCTTCEE
T ss_pred EEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcC-CCCeEEEEeCCccccCCHHHHHH--HHhhhccCCEE
Confidence 5889999999999999999999999997666799999888876 67777777788888888776642 23567899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh----hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcC
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI----NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNL 150 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~----p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~ 150 (239)
++++. .+.+.+..+++.+++.| ++|+ +.+.++++++ ++|++|+..|++ +
T Consensus 136 ~~~g~---~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~ll~~~dil~~N~~E~~~l~g------------------~ 194 (299)
T 3ikh_A 136 LQQGN---FSLDKTRALFQYARSRGMTTVFNPSPVNPDFCHLWPLIDIAVVNESEAELLQP------------------Y 194 (299)
T ss_dssp EECSC---SCHHHHHHHHHHHHHTTCEEEECCCSCCGGGGGCGGGCSEEEEEHHHHHHHCC------------------C
T ss_pred EECCC---CCHHHHHHHHHHHHHcCCEEEEccccchhhHHHHHhhCCEEEecHHHHHHHhc------------------C
Confidence 99753 45788899999999888 6666 2344667766 999999988753 2
Q ss_pred CCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhH-HHHHHHHcCCCHHH-HHHHHHHHHHH
Q psy6977 151 PKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVG-GFLSQLIKGEPLSV-CIECGVWAAQH 228 (239)
Q Consensus 151 ~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~a-g~~~~l~~g~~~~~-a~~~a~~~a~~ 228 (239)
|++.||||+|++|++++++++.+++|++++ +++||+||||+|+| ||++++++|+++++ |+++|+++|+.
T Consensus 195 ------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~~~aa~ 265 (299)
T 3ikh_A 195 ------GVKTLVITQGAAGAWLVQEGQRQFCPAVPA---EALDTTGAGDTFLAVMLASALLRGVAPDALALAHASRAAAI 265 (299)
T ss_dssp ------SCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred ------CCCEEEEEECCCceEEEeCCceEEeCCCCC---ccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 789999999999999999888999999988 89999999999999 99999999999999 99999999999
Q ss_pred HHHhccCcC
Q psy6977 229 IIQVSGCTL 237 (239)
Q Consensus 229 ~~~~~G~~~ 237 (239)
++++.|++.
T Consensus 266 ~v~~~G~~~ 274 (299)
T 3ikh_A 266 TVSRRGTLS 274 (299)
T ss_dssp HHHSSSSTT
T ss_pred HhCCCcccc
Confidence 999999875
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=234.75 Aligned_cols=212 Identities=16% Similarity=0.170 Sum_probs=171.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeech--hhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+.+++.|+++||+++++.+.+.+|+.+++.++. +++|.++.+. +++..+++++++. ..+++++
T Consensus 53 ~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~-~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~ 127 (309)
T 1v1a_A 53 VGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLP-LGQGRVFYYRKGSAGSALAPGAFDP----DYLEGVR 127 (309)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECT-TSCEEEEEECTTCSGGGCCTTSSCG----GGGTTCS
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECC-CCCceEEEeCCCChhhhCCHhhCCh----hHhcCCC
Confidence 4789999999999999999999999988643399998887765 4566655432 4567788877764 5678999
Q ss_pred EEEEeccccc---cChHHHHHHHHHhhhCC---CCCh---h----------hHHHHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 79 YYYVSGFFLT---VSPESILEVAKVALSCT---IRNI---N----------YLHHRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 79 ~~~~~g~~~~---~~~~~~~~~~~~~~~~g---~~~~---p----------~~~~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
++|++|+.+. .+.+.+.++++.+++.+ .+|+ + .+.++++++ ++|++|+..|++.
T Consensus 128 ~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~---- 203 (309)
T 1v1a_A 128 FLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGR---- 203 (309)
T ss_dssp EEEEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSS----
T ss_pred EEEEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCC----
Confidence 9999998763 33467888999998887 4444 2 122556655 9999999999864
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCH
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~ 215 (239)
+ +++++ + .|++.||||+|++|+++ .+ ++.+++|++++ +++||+||||+|+|||++++++|+++
T Consensus 204 -~--~~~~~---~------~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~ 267 (309)
T 1v1a_A 204 -V--EEALR---A------LSAPEVVLKRGAKGAWA-FVDGRRVEGSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPV 267 (309)
T ss_dssp -H--HHHHH---H------TCCSEEEEECGGGCEEE-EETTEEEECCCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred -H--HHHHH---h------cCCCEEEEEecCCCeeE-ecCCcEEEeCCCCC---CcCCCCCchHHHHHHHHHHHHcCCCH
Confidence 2 44443 3 38999999999999998 65 67888888887 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCcC
Q psy6977 216 SVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
++|+++|+++|+.++++.|++.
T Consensus 268 ~~a~~~a~~~aa~~v~~~G~~~ 289 (309)
T 1v1a_A 268 EERLRLANLLGASVAASRGDHE 289 (309)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTT
T ss_pred HHHHHHHHHHHHHHHcCCCCCc
Confidence 9999999999999999999874
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=238.57 Aligned_cols=223 Identities=13% Similarity=0.100 Sum_probs=176.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|+||+ .+|+++++.|+++||+++++.+.+ .|+++++++++ + .++++...++ .+++++++.. .+.+.+++++
T Consensus 76 i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~-~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 149 (330)
T 2jg1_A 76 SGFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHE-G-QQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVE 149 (330)
T ss_dssp EEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEET-T-EEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCS
T ss_pred EEEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeC-C-CcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCC
Confidence 478996 699999999999999999998754 47888877765 4 6665554432 4554433311 1113468999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh---HH---hcCHHHHHHHHHHcCC-CccCHHHHHH
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI---YL---VLIDFEALAFAKQQNF-QTEDLHAIAL 145 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~---~~---~~n~~E~~~l~~~~~~-~~~~~~~~~~ 145 (239)
+++++|+.+. .+.+.+.++++.+++.| ++|+ +.+.++++ ++ ++|++|+..|++.... +.++++++++
T Consensus 150 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~ 229 (330)
T 2jg1_A 150 AVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVS 229 (330)
T ss_dssp EEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCHHHHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHH
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcHHHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 9999987664 55678899999999888 6676 34556665 34 9999999999875321 2235666666
Q ss_pred HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 146 ~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
.+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 230 ~l~~~------g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~a~ 300 (330)
T 2jg1_A 230 QPLFE------GIEWIIVSLGAQGAFAKHNHTFYRVNIPTI---SVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTL 300 (330)
T ss_dssp SGGGT------TCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHc------CCCEEEEeecCCceEEEeCCCEEEEeCCCc---cccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 66664 899999999999999999888889999887 899999999999999999999999999999999999
Q ss_pred HHHHHHhccCcCC
Q psy6977 226 AQHIIQVSGCTLG 238 (239)
Q Consensus 226 a~~~~~~~G~~~~ 238 (239)
|+.++++.|++.|
T Consensus 301 aa~~v~~~G~~~~ 313 (330)
T 2jg1_A 301 GMLNAQEAQTGYV 313 (330)
T ss_dssp HHHHHTSSSSSCC
T ss_pred HHHHhcCcCCCCC
Confidence 9999999998754
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=231.07 Aligned_cols=213 Identities=22% Similarity=0.285 Sum_probs=176.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++|| ++.+ .+.+|+.+++++++ +++|+++.+++++..+++++++ .+.++.+++
T Consensus 72 i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~-~g~~~~~~~~ga~~~l~~~~~~----~~~~~~~~~ 143 (311)
T 1vm7_A 72 VTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDK-TGQNRIIIFPGANAELKKELID----WNTLSESDI 143 (311)
T ss_dssp EEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECT-TSCEEEEEECGGGGGCCGGGCC----HHHHTTCSE
T ss_pred EEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECC-CCCEEEEEecCccccCCHHHhC----hhhcccCCE
Confidence 4789999999999999999999 6665 56699999998875 6778887777877788887775 256789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h---hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N---YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p---~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+++++. .+.+.+..+ +++.+ ++|+ + ...++++++ ++|++|+..|++....+.+++.++++.+.+
T Consensus 144 v~~~~~---~~~~~~~~~---a~~~~~~v~~Dp~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 217 (311)
T 1vm7_A 144 LLLQNE---IPFETTLEC---AKRFNGIVIFDPAPAQGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLE 217 (311)
T ss_dssp EEECSS---SCHHHHHHH---HHHCCSEEEECCCSCTTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred EEEeCC---CCHHHHHHH---HHHcCCEEEEeCcchhhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHH
Confidence 999653 344444333 66666 5665 3 233667766 999999999998643345678888888888
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+ |++.|++|+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 218 ~------g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 288 (311)
T 1vm7_A 218 L------GVKNVIVKLGDKGVLLVNKNEKKHFPTFKV---KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAIS 288 (311)
T ss_dssp T------TCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred c------CCCEEEEEECCCCeEEEeCCceEEecCCCc---ccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 5 899999999999999999888888988887 7999999999999999999999999999999999999999
Q ss_pred HHhccCc
Q psy6977 230 IQVSGCT 236 (239)
Q Consensus 230 ~~~~G~~ 236 (239)
+++.|++
T Consensus 289 v~~~G~~ 295 (311)
T 1vm7_A 289 VTRLGAQ 295 (311)
T ss_dssp TTSSSSG
T ss_pred hCcCCcc
Confidence 9999986
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=234.06 Aligned_cols=223 Identities=17% Similarity=0.145 Sum_probs=171.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEE-EecCCCceeEeechhhhhccCCCCCCCc--hhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVL-ITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~-~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~ 77 (239)
+|.||+| +|+++++.|+++||+++++.+.+ .|++++++ +++ +++|+++..+++ .+++++++.. ...+.+++
T Consensus 58 i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~-~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~- 131 (309)
T 3cqd_A 58 IFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEA-SGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG- 131 (309)
T ss_dssp EEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETT-TCCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-
T ss_pred EEEecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcC-CCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-
Confidence 4789998 99999999999999999998754 46666666 665 566776655442 3444433210 11234677
Q ss_pred eEEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh-h----HHhcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 78 EYYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF-I----YLVLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 78 ~~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~-~----~~~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
++++++|+.+. .+.+.+.++++.+++.| .+|+ +.+.+.+ + .+++|++|+..|++....+.+++.++++.
T Consensus 132 ~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~ 211 (309)
T 3cqd_A 132 AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQE 211 (309)
T ss_dssp CEEEEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHHHHHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChHHHHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 99999987654 45688899999999888 5666 3333332 2 23999999999998644344567788888
Q ss_pred HhcCCCCCCCC-ceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 147 ISNLPKQNPNR-ERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 147 l~~~~~~~~~g-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
+.++ | ++.|++|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 212 l~~~------g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 282 (309)
T 3cqd_A 212 IVNS------GKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAA 282 (309)
T ss_dssp HHHT------TSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHc------CCCCEEEEEecCCceEEEECCceEEEeCCcc---ccCCCcCcHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 8885 8 89999999999999998888888998887 899999999999999999999999999999999999
Q ss_pred HHHHHHhccCcCC
Q psy6977 226 AQHIIQVSGCTLG 238 (239)
Q Consensus 226 a~~~~~~~G~~~~ 238 (239)
|+.++++.|++.|
T Consensus 283 aa~~~~~~G~~~~ 295 (309)
T 3cqd_A 283 GSAATLNQGTRLC 295 (309)
T ss_dssp HHHHTC-----CC
T ss_pred HHHHHcCcCCCCC
Confidence 9999999998765
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-34 Score=232.55 Aligned_cols=215 Identities=13% Similarity=0.154 Sum_probs=171.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+++++.|+++||+++++.+. +.+|++++++++..+++|+++.++++...+++++++. ..++++++
T Consensus 74 ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~ 149 (312)
T 2hlz_A 74 MGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEK----VDLTQFKW 149 (312)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHT----SCGGGEEE
T ss_pred EEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhH----hhhccCCE
Confidence 478999999999999999999999988865 5678888887764467888877766666666655432 35679999
Q ss_pred EEEeccccccChHHHHHHHHHhhhC--------C---CCCh----hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSC--------T---IRNI----NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLH 141 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~--------g---~~~~----p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~ 141 (239)
++++++. ++.+.++++.+++. + .+|+ +.+.++++++ ++|++|+..+ +. ++++
T Consensus 150 v~~~~~~----~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~~~~~~~~l~~~dil~~n~~ea~~l-g~-----~~~~ 219 (312)
T 2hlz_A 150 IHIEGRN----ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHL-GF-----QSAE 219 (312)
T ss_dssp EEEECSS----HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSCCGGGGGGGGSSSEEEECHHHHHHT-TC-----CSHH
T ss_pred EEEeccC----HHHHHHHHHHHHHhcccccCCCCeEEEEEcccchHHHHHHHhcCCEEEEcHHHHHHc-CC-----CCHH
Confidence 9998763 45666777777665 4 3444 2345677766 9999999876 42 5778
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEecc-CCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQ-RLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~-~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~ 219 (239)
++++.+.++.. .| +.||||+|++|++++++ ++.+++|++ ++ +++||+||||+|+|||++++++|+++++|+
T Consensus 220 ~~~~~l~~~~~---~g-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~---~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~ 292 (312)
T 2hlz_A 220 EALRGLYGRVR---KG-AVLVCAWAEEGADALGPDGKLLHSDAFPPP---RVVDTLGAGDTFNASVIFSLSQGRSVQEAL 292 (312)
T ss_dssp HHHHHHGGGSC---TT-CEEEEECGGGCEEEECTTCCEEEECCCCCS---SCCCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHhcC---CC-CEEEEEecccCeEEEccCCCEEECCCCCCC---CcccCCCchHHHHHHHHHHHHcCCCHHHHH
Confidence 88888887633 24 89999999999999875 557788874 44 799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCc
Q psy6977 220 ECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 220 ~~a~~~a~~~~~~~G~~ 236 (239)
++|+++|+.++++.|+.
T Consensus 293 ~~a~~~aa~~v~~~G~~ 309 (312)
T 2hlz_A 293 RFGCQVAGKKCGLQGFD 309 (312)
T ss_dssp HHHHHHHHHHHTSSSSG
T ss_pred HHHHHHHHHHHhhcCcc
Confidence 99999999999999974
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=228.74 Aligned_cols=208 Identities=22% Similarity=0.233 Sum_probs=171.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++.+ ++.+|+.+++++++ +++|+++.+.+++..+++++++. .++++
T Consensus 62 i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 133 (302)
T 2c4e_A 62 LSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDK-DNNQITFFLWGAAKHYKELNPPN-------FNTEI 133 (302)
T ss_dssp ECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECS-SCCEECCEECGGGGGGGGCCCCC-------CCEEE
T ss_pred EEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECC-CCCEEEEEeCChhhhCCHhhcCc-------ccCCE
Confidence 58899999999999999999999998775 45689999988875 66777777777777788777652 68999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC--CCCh-hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT--IRNI-NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIAL 145 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g--~~~~-p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~ 145 (239)
+|+++.. ++.+..+++.+++.| ++|+ +. +.++++++ ++|++|+..|++... .+..
T Consensus 134 v~~~~~~----~~~~~~~~~~a~~~g~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~---- 202 (302)
T 2c4e_A 134 VHIATGD----PEFNLKCAKKAYGNNLVSFDPGQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLN---FEID---- 202 (302)
T ss_dssp EEECSSC----HHHHHHHHHHHBTTBEEEECCGGGGGGCCHHHHHHHHHTCSEEEEEHHHHHHHHHHHT---CCHH----
T ss_pred EEEeCCC----cHHHHHHHHHHHhcCCEEEeCchhhhhhhHHHHHHHHhcCCEEEcCHHHHHHHhCCCC---ccHH----
Confidence 9997532 378888999988776 5555 21 23566665 999999999998632 1211
Q ss_pred HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCC-cccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAES-VVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 146 ~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~-vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
.+++ . ++.||||+|++|++++++++.+++|++++ + ++||+||||+|+|||++++++|+++++|+++|++
T Consensus 203 ~l~~------~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~ 272 (302)
T 2c4e_A 203 DYLE------R-VDALIVTKGSKGSVIYTKDKKIEIPCIKA---GKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAA 272 (302)
T ss_dssp HHHT------T-CSEEEEECGGGCEEEECSSCEEEECCCCC---SCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHh------c-CCEEEEEECCCceEEEeCCcEEEeCCccC---CcCCcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4555 3 58999999999999998888888998887 6 9999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcC
Q psy6977 225 AAQHIIQVSGCTL 237 (239)
Q Consensus 225 ~a~~~~~~~G~~~ 237 (239)
+|+.++++.|++.
T Consensus 273 ~aa~~~~~~G~~~ 285 (302)
T 2c4e_A 273 TASFVVEAKGCQT 285 (302)
T ss_dssp HHHHHTTSSSSST
T ss_pred HHHHHHccccccc
Confidence 9999999999863
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=232.68 Aligned_cols=223 Identities=13% Similarity=0.142 Sum_probs=175.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|.||+ .+|+++++.|+++||+++++.+.+ +|+++++++++ + +++++...++ .+++++++.. .+.+.+++++
T Consensus 58 ~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~-~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~ 131 (323)
T 2f02_A 58 TGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHE-G-NQTEILEAGP--TVSPEEISNFLENFDQLIKQAE 131 (323)
T ss_dssp EEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEET-T-EEEEEEECCC--BCCHHHHHHHHHHHHHHHTTCS
T ss_pred EEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcC-C-CeEEEECCCC--CCCHHHHHHHHHHHHHhccCCC
Confidence 478997 599999999999999999988755 57777777765 4 6666554442 4555443321 1123568999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh---HH---hcCHHHHHHHHHHcCC-Cc-cCHHHHH
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI---YL---VLIDFEALAFAKQQNF-QT-EDLHAIA 144 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~---~~---~~n~~E~~~l~~~~~~-~~-~~~~~~~ 144 (239)
+++++|+.+. .+.+.+..+++.+++.| ++|+ +.+.++++ ++ ++|.+|+..|++.... +. +++.+++
T Consensus 132 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~ 211 (323)
T 2f02_A 132 IVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDSLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTAL 211 (323)
T ss_dssp EEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHHHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHH
T ss_pred EEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECChHHHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHH
Confidence 9999987664 45578889999999888 6676 34556664 44 9999999999986321 12 3455666
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|++
T Consensus 212 ~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~ 282 (323)
T 2f02_A 212 TKPMFA------GIEWIVISLGKDGAIAKHHDQFYRVKIPTI---QAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMA 282 (323)
T ss_dssp TSGGGT------TCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHc------CCCEEEEeecCCceEEEeCCCEEEEcCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 666664 899999999999999999888889999887 89999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++++.|+..|
T Consensus 283 ~aa~~v~~~G~~~~ 296 (323)
T 2f02_A 283 AGMANAQERMTGHV 296 (323)
T ss_dssp HHHHHHHSSSSSCC
T ss_pred HHHHHHcCCCcCCC
Confidence 99999999998754
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=233.33 Aligned_cols=219 Identities=16% Similarity=0.214 Sum_probs=173.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEE-ecCCCCceeEEEEEecCCCc--eeEeechhhhhccCCCCCCC--chhhhccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQ-HHDTEPTGTCAVLITDNGKA--RSLVANLAAANLFTPDHLHV--PENNKLIQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v-~~~~~~t~~~~~~~~~~~~~--r~~~~~~~~~~~l~~~~i~~--~~~~~~~~ 75 (239)
+|.||+| +|+.+++.|+++||+++++ ...+ +|+.++++++ +++ |+++...+ ..+++++++. ..+.+.++
T Consensus 59 i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~--~g~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~ 132 (320)
T 3ie7_A 59 LGIAGSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLS--DDTNGSTMIPEAG--FTVSQTNKDNLLKQIAKKVK 132 (320)
T ss_dssp EEEEEST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEE--TTCSCCEEEECCC--CCCCHHHHHHHHHHHHHHCC
T ss_pred EEEecCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEE--CCCceeEEEeCCC--CCCCHHHHHHHHHHHHHHhc
Confidence 4789998 9999999999999999999 4544 8999998887 445 67665544 3454443331 11235678
Q ss_pred ceeEEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh-HH---hcCHHHHHHHHHHcCCCccCHHHHHH
Q psy6977 76 NAEYYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI-YL---VLIDFEALAFAKQQNFQTEDLHAIAL 145 (239)
Q Consensus 76 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~-~~---~~n~~E~~~l~~~~~~~~~~~~~~~~ 145 (239)
++++++++|+.+. .+.+.+.++++.+++.| ++|+ ..+++.++ ++ ++|++|+..|++.. ...-.+.+.
T Consensus 133 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~l~~~l~~~~dil~~N~~E~~~l~g~~---~~~~~~~~~ 209 (320)
T 3ie7_A 133 KEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEYLNLAVEMGVDFIKPNEDEVIAILDEK---TNSLEENIR 209 (320)
T ss_dssp TTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCHHHHHHHHHHCCSEECCBTTGGGGGSCTT---CCCHHHHHH
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHHHHHHHhcCCeEEeeCHHHHHHHhCCC---cCCCHHHHH
Confidence 9999999998654 55688999999999888 6676 44555554 44 99999999988762 121223333
Q ss_pred HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 146 ~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
.+.+ . ++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 210 ~~~~------~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~~~~a~~~A~a~ 279 (320)
T 3ie7_A 210 TLAE------K-IPYLVVSLGAKGSICAHNGKLYQVIPPKV---QERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGC 279 (320)
T ss_dssp HHTT------T-CSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHh------h-CCEEEEEcCCCceEEEeCCcEEEEeCCcc---CCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4444 2 68999999999999999999999999988 899999999999999999999999999999999999
Q ss_pred HHHHHHhccCcCC
Q psy6977 226 AQHIIQVSGCTLG 238 (239)
Q Consensus 226 a~~~~~~~G~~~~ 238 (239)
|+.++++.|+..|
T Consensus 280 aa~~v~~~G~~~~ 292 (320)
T 3ie7_A 280 SASKVMQQDSSSF 292 (320)
T ss_dssp HHHHHTSSSSSCC
T ss_pred HHHHHhCcCCCCC
Confidence 9999999997654
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=227.01 Aligned_cols=223 Identities=21% Similarity=0.208 Sum_probs=172.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhh-hhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAA-ANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~-~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+.+++.|+++|| +++.+. +.+|+.+++.+++ +++|++....+. ...+++. ....+.+++++
T Consensus 44 ~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~-~g~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~ 116 (296)
T 2qhp_A 44 VSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDD-EGVPCYEIKEGVAWDNIPFT----DELKRLALNTR 116 (296)
T ss_dssp EEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC-------CCEEECSSCGGGCCCCC----HHHHHHHHTEE
T ss_pred EEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECC-CCCEEEEEecCChhhhCCcc----hhhHhhhcCCC
Confidence 4789999999999999999999 777654 6689998887775 456555444332 3344332 12235678999
Q ss_pred EEEEeccccc--cChHHHHHHHHHhhh-CC---CCCh---h------hHHHHhhHH---hcCHHHHHHHHHHcCCCccCH
Q psy6977 79 YYYVSGFFLT--VSPESILEVAKVALS-CT---IRNI---N------YLHHRFIYL---VLIDFEALAFAKQQNFQTEDL 140 (239)
Q Consensus 79 ~~~~~g~~~~--~~~~~~~~~~~~~~~-~g---~~~~---p------~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~ 140 (239)
++|++++... .+.+.+..+++.+++ .+ ++|+ + .+.++++++ ++|++|++.|++....+.+++
T Consensus 117 ~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~ 196 (296)
T 2qhp_A 117 AVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYTKEVLRESFKRCNILKINDEELVTISRMFGYPGIDL 196 (296)
T ss_dssp EEEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCCCHHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCH
T ss_pred EEEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccccCHHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCH
Confidence 9999764322 345678888888886 46 3443 2 223666665 999999999999754445678
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHH
Q psy6977 141 HAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIE 220 (239)
Q Consensus 141 ~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~ 220 (239)
+++++.+.++ .|++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|++
T Consensus 197 ~~~~~~l~~~-----~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGD~f~a~~~~~l~~g~~~~~a~~ 268 (296)
T 2qhp_A 197 QDKCWILLAK-----YNLKMLILTCGINGSYVFTPGVVSFQETPKV---PVADTVGAGDSFTAAFCASILNGKSVPEAHK 268 (296)
T ss_dssp HHHHHHHHHH-----TTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHh-----cCCCEEEEeecCCCeEEEECCeEEEeCCCCC---ccccCCCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 8888888763 2889999999999999999888889999887 7999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcCC
Q psy6977 221 CGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~~~~ 238 (239)
+|+++|+.++++.|++.+
T Consensus 269 ~a~~~aa~~v~~~G~~~~ 286 (296)
T 2qhp_A 269 LAVEVSAYVCTQSGAMPE 286 (296)
T ss_dssp HHHHHHHHHHTSSSSSCC
T ss_pred HHHHHHHHHHcCCCCCCC
Confidence 999999999999998754
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=230.21 Aligned_cols=198 Identities=19% Similarity=0.200 Sum_probs=169.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+.+++.|+++||+++++...+.+|+.+++++++ +++|+++.+.+++..++ ++. +.+++++++
T Consensus 76 i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~-~g~~~~~~~~ga~~~l~--~~~-----~~l~~~~~v 147 (310)
T 3go6_A 76 SGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDA-SAENTVLVAPGANAHLT--PVP-----SAVANCDVL 147 (310)
T ss_dssp ECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECT-TSCEEEEEECGGGGGCC--CCT-----TTTTTCSEE
T ss_pred EEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcC-CCCEEEEecCChhhhHH--HHH-----HHhhcCCEE
Confidence 5889999999999999999999999997766799999998886 67788887777777666 332 678899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh-h------hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI-N------YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKI 147 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p------~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l 147 (239)
++++ ..+.+.+..+++.+++.| ++|+ + .+.++++++ ++|++|+..|++.
T Consensus 148 ~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~--------------- 209 (310)
T 3go6_A 148 LTQL---EIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSP--------------- 209 (310)
T ss_dssp EECS---SSCHHHHHHHHHHHHHTTCEEEEECCSSSCCHHHHHHHHHHCSEEEEEHHHHHHSSSC---------------
T ss_pred EECC---CCCHHHHHHHHHHHHHcCCEEEEcCCccccchHHHHHHHhhCCEEEeCHHHHHHHhCC---------------
Confidence 9965 356788999999999988 5555 2 222666666 8999999877531
Q ss_pred hcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHc----CCCHHHHHHHHH
Q psy6977 148 SNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIK----GEPLSVCIECGV 223 (239)
Q Consensus 148 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~----g~~~~~a~~~a~ 223 (239)
++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++ |+++++|+++|+
T Consensus 210 ----------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~~A~ 276 (310)
T 3go6_A 210 ----------PTHFVITLGVRGARYVGADGVFEVPAPTV---TPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRAC 276 (310)
T ss_dssp ----------CSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHHHHH
T ss_pred ----------CCEEEEEECCCCEEEEECCceEEeCCCCC---CcCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Confidence 37999999999999999999999999988 7999999999999999999999 999999999999
Q ss_pred HHHHHHHHhccCcC
Q psy6977 224 WAAQHIIQVSGCTL 237 (239)
Q Consensus 224 ~~a~~~~~~~G~~~ 237 (239)
++|+.++++.|++.
T Consensus 277 ~~aa~~v~~~G~~~ 290 (310)
T 3go6_A 277 AAGALATLVSGVGD 290 (310)
T ss_dssp HHHHHHTTSSCSTT
T ss_pred HHHHHHhCCCCCCC
Confidence 99999999999964
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=238.37 Aligned_cols=216 Identities=22% Similarity=0.299 Sum_probs=168.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeech--hhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+++++.|+++||+++++.+ .+.+|+.+++.+++ +++|+++.+. +++..++++. .+.+.++
T Consensus 70 ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~-~g~r~~~~~~~~~a~~~l~~~~------~~~l~~~ 142 (339)
T 1tyy_A 70 IGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTA-DGERSFTYLVHPGADTYVSPQD------LPPFRQY 142 (339)
T ss_dssp EEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC--------CEEECCSSCGGGGCCGGG------CCCCCTT
T ss_pred EEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcC-CCCeEEEEecCCChhhhCCcch------hhHhccC
Confidence 47899999999999999999999999886 45689988877765 5666655433 4555565431 1457789
Q ss_pred eEEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
++++++++.+. .+.+.+.++++.+++.| ++|+ +. +.++++++ ++|++|+..|++.
T Consensus 143 ~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~--- 219 (339)
T 1tyy_A 143 EWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA--- 219 (339)
T ss_dssp CEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC---
T ss_pred CEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC---
Confidence 99999886432 34567888999999888 3443 21 22555665 9999999999875
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC---
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG--- 212 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g--- 212 (239)
++++++++.+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|
T Consensus 220 --~~~~~~~~~l~~~------g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~ 288 (339)
T 1tyy_A 220 --SHWQDARYYLRDL------GCDTTIISLGADGALLITAEGEFHFPAPRV---DVVDTTGAGDAFVGGLLFTLSRANCW 288 (339)
T ss_dssp --SSGGGGSSTTGGG------TCSCEEEECGGGCEEEESSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHTTSSSC
T ss_pred --CCHHHHHHHHHHc------CCCEEEEEECCCceEEEeCCceEEcCCCCC---CcCCCCCchHHHHHHHHHHHHhcccc
Confidence 4556666666653 899999999999999998888889999887 79999999999999999999997
Q ss_pred --CCHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 213 --EPLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 213 --~~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
.++++|+++|+++|+.++++.|++.
T Consensus 289 ~~~~l~~a~~~A~a~aa~~v~~~G~~~ 315 (339)
T 1tyy_A 289 DHALLAEAISNANACGAMAVTAKGAMT 315 (339)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGSSSTTT
T ss_pred ccccHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999999999999864
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=230.95 Aligned_cols=224 Identities=17% Similarity=0.150 Sum_probs=173.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeech---hhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANL---AAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~---~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+.+++.|+++||+++++.+.+.+|+.+++.++. ++.++++.+. .+...+++++++. ...++++
T Consensus 64 i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~-~~r~~~v~~~~~~~a~~~~~~~~~~~---~~~~~~~ 139 (351)
T 2afb_A 64 VTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGA-SQRPSKVVYDRAHSAISEAKREDFDW---EKILDGA 139 (351)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCB-TTBCCEEEEECTTCTTTTCCGGGCCH---HHHTTTE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecC-CCCcceEEEeCCCChhhhCChhhCCH---HHhhcCC
Confidence 4789999999999999999999999988766688887766553 4444444332 2234555555541 2456899
Q ss_pred eEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---h----------hHHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---N----------YLHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p----------~~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++|++|+.+.++. +.+.++++.+++.| ++|+ + .+.++++++ ++|++|+..|++....
T Consensus 140 ~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~ 219 (351)
T 2afb_A 140 RWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVE 219 (351)
T ss_dssp EEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCS
T ss_pred CEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcc
Confidence 99999988765443 77888899988877 3443 1 122566665 9999999999986321
Q ss_pred ---------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcE--------EEEECCeEEEEeccCCCCCCcccCCCCc
Q psy6977 136 ---------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPI--------ILSQNGKTTEFPVQRLPAESVVDTNGAG 198 (239)
Q Consensus 136 ---------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~--------~~~~~~~~~~~~~~~~~~~~vvdt~GaG 198 (239)
+.+++.++++.+.+. .|++.||||+|++|+ +++++++.+++|++++ +++||+|||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~l~~~-----~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAG 291 (351)
T 2afb_A 220 GLDLKTGKLNREAYAKIAEEVTRK-----YNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEI---HIVDRVGAG 291 (351)
T ss_dssp CC-------CHHHHHHHHHHHHHH-----HCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEE---ECSCCTTHH
T ss_pred cccccccccchhhHHHHHHHHHHH-----cCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCC---ccCCCCCch
Confidence 223466777777662 178999999999975 6777888888998887 799999999
Q ss_pred hhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhccCc
Q psy6977 199 DSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 199 Daf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
|+|+|||++++++|+++++|+++|+++|+.++++.|++
T Consensus 292 DaF~ag~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~ 329 (351)
T 2afb_A 292 DSFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPGDF 329 (351)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTSSSSS
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999985
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=235.38 Aligned_cols=223 Identities=13% Similarity=0.113 Sum_probs=175.6
Q ss_pred CCcccCCchHHHHHHHHHhcC--CeeeEEecCCCCceeEEEEEecCCCce-eEeechhhhhccCCCCCCCc--hhhhccc
Q psy6977 1 MGAVGKDNYSDILESKASEFG--LVVKYQHHDTEPTGTCAVLITDNGKAR-SLVANLAAANLFTPDHLHVP--ENNKLIQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~g--I~~~~v~~~~~~t~~~~~~~~~~~~~r-~~~~~~~~~~~l~~~~i~~~--~~~~~~~ 75 (239)
+|.||+| +|+++++.|+++| |+++++.+.+ +|+++++++++ +++| +.+..+++ .+++++++.. ...+.+.
T Consensus 71 ~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~-~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~ 145 (331)
T 2ajr_A 71 TGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDE-KNKTITAINFPGP--DVTDMDVNHFLRRYKMTLS 145 (331)
T ss_dssp EEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEET-TTTEEEEEECCCC--CCCHHHHHHHHHHHHHHHT
T ss_pred EEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeC-CCceEEEEeCCCC--CCCHHHHHHHHHHHHHhcc
Confidence 4789998 9999999999999 9999998755 57888888875 5566 66554443 3544433210 1124568
Q ss_pred ceeEEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhhH---H---hcCHHH-HHHHHHHcCCCccCHHH
Q psy6977 76 NAEYYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFIY---L---VLIDFE-ALAFAKQQNFQTEDLHA 142 (239)
Q Consensus 76 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~~---~---~~n~~E-~~~l~~~~~~~~~~~~~ 142 (239)
.+++++++|+.+. .+.+.+..+++.+++.| ++|+ +.+.+++++ + ++|++| +..|++....+.+++++
T Consensus 146 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~ 225 (331)
T 2ajr_A 146 KVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVK 225 (331)
T ss_dssp TCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHHHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHH
T ss_pred cCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHHHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHH
Confidence 8999999987653 45678899999999888 6676 344556653 3 999999 98888753222345666
Q ss_pred HHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEe-ccCCCCCCcccCCCCchhhhHHHHHHHH-cCCCHHHHHH
Q psy6977 143 IALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFP-VQRLPAESVVDTNGAGDSFVGGFLSQLI-KGEPLSVCIE 220 (239)
Q Consensus 143 ~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~-~~~~~~~~vvdt~GaGDaf~ag~~~~l~-~g~~~~~a~~ 220 (239)
+++.+.+ . ++.||||+|++|++++++++.+++| ++++ +++||+||||+|+|||+++++ +|+++++|++
T Consensus 226 ~~~~l~~------~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~l~~l~~~g~~~~~al~ 295 (331)
T 2ajr_A 226 LAEKLAE------K-SQVSVVSYEVKNDIVATREGVWLIRSKEEI---DTSHLLGAGDAYVAGMVYYFIKHGANFLEMAK 295 (331)
T ss_dssp HHHHHHH------H-SSEEEEEETTTEEEEECSSCEEEEEESSCC---CGGGCTTHHHHHHHHHHHHHHHHCSCHHHHHH
T ss_pred HHHHHHH------h-cCEEEEeecCCceEEEeCCcEEEEecCCcc---cccCCCchHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 7777776 3 5899999999999999888888888 8877 899999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHhccCcCC
Q psy6977 221 CGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~~~~ 238 (239)
+|+++|+.++++.|+..|
T Consensus 296 ~A~a~aa~~v~~~G~~~~ 313 (331)
T 2ajr_A 296 FGFASALAATRRKEKYMP 313 (331)
T ss_dssp HHHHHHHHHTTSSSCCCC
T ss_pred HHHHHHHHHHcCcCcCCC
Confidence 999999999999998654
|
| >4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=235.21 Aligned_cols=231 Identities=16% Similarity=0.107 Sum_probs=166.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechh--hhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLA--AANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~--~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+|++|+++++.|+++||+++++.+.+.+++.+++.....++.+.++.+.. +...+.+.+++ ..+.+++++
T Consensus 76 ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~---~~~~~~~~~ 152 (351)
T 4gm6_A 76 ATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWD---LSELLKGIR 152 (351)
T ss_dssp EEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCC---HHHHHTTEE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccC---HHHHHhhcc
Confidence 5889999999999999999999999998776666566655555455665554432 23344444443 236789999
Q ss_pred EEEEeccccccC---hHHHHHHHHHhhhCC-----CCCh-hhHH----------HHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 79 YYYVSGFFLTVS---PESILEVAKVALSCT-----IRNI-NYLH----------HRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 79 ~~~~~g~~~~~~---~~~~~~~~~~~~~~g-----~~~~-p~~~----------~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
++|++|+.+..+ .+.+.++++.+++.| ++|+ |.+| ++++++ ++|++|+..+++.....
T Consensus 153 ~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~ 232 (351)
T 4gm6_A 153 VLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSET 232 (351)
T ss_dssp EEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTC
T ss_pred cceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCch
Confidence 999998776544 367889999999999 4554 4433 455655 99999999998763322
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCC--CcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGD--KPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP 214 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~--~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~ 214 (239)
.+..+...+....... ..+.+.++++.+. .+..++..++.++.+++++ .+|+||+||||+|+|||++++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~VvDttGAGDaF~ag~l~~l~~g~~ 308 (351)
T 4gm6_A 233 TDYYQAMHDKYPNIEL--FYATKRTVISASHHLLQGHLWTQGECWESEEYAI--YPIVDRVGGGDAYTAAVLHGILSEWR 308 (351)
T ss_dssp SCHHHHHHHHCTTCCE--EEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE--CSCSCCTTHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHhhhhhhhh--hhccccceeeeccCCceEEEEeCCceEEeCCCCC--CCcCCCCChhHHHHHHHHHHHHCCCC
Confidence 2222322222211100 0133445555544 4567778888777777765 27999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 215 LSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 215 ~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
+++|+++|+++|+.++++.|++.+
T Consensus 309 ~~~al~~A~aaaal~v~~~Ga~~~ 332 (351)
T 4gm6_A 309 PDETVKFATAAAGLKHSIHGDINP 332 (351)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSSCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999998765
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=225.28 Aligned_cols=217 Identities=15% Similarity=0.160 Sum_probs=172.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc-hhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP-ENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~ 79 (239)
+|+||+ .+|+++++.|+++||+++++.+.+ +|+.++++ + +++|+++...+ ..+++++++.. +....++++++
T Consensus 56 ~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~--~-~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
T 2abq_A 56 LGFLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI--K-GKQETELNGTA--PLIKKEHVQALLEQLTELEKGDV 128 (306)
T ss_dssp EEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE--E-SSSCEEEBCCC--CCCCHHHHHHHHHHHTTCCTTCE
T ss_pred EEEecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE--e-CCceEEEECCC--CCCCHHHHHHHHHHHHhccCCCE
Confidence 478998 799999999999999999998754 57776654 3 55676655444 23544433210 01111578999
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh-HH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI-YL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~-~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+|++|+.+. .+.+.+.++++.+++.| ++|+ +.+.++++ ++ ++|.+|+..|++....+.+++.++++.+.+
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 208 (306)
T 2abq_A 129 LVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIG 208 (306)
T ss_dssp EEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHHHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 999987654 55688889999999888 6676 44557777 55 999999999998643333556677788877
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+ |++.||+|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 209 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~aa~~ 279 (306)
T 2abq_A 209 E------GIESILVSFAGDGALFASAEGMFHVNVPSG---EVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSAT 279 (306)
T ss_dssp T------TCCEEEEECGGGCEEEEETTEEEEECCCCC---CCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred c------CCCEEEEecCCCceEEEeCCCEEEEeCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 899999999999999998888888998887 7999999999999999999999999999999999999999
Q ss_pred HHhc
Q psy6977 230 IQVS 233 (239)
Q Consensus 230 ~~~~ 233 (239)
+++.
T Consensus 280 v~~~ 283 (306)
T 2abq_A 280 AFSD 283 (306)
T ss_dssp HHSS
T ss_pred hcCc
Confidence 9987
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-31 Score=219.77 Aligned_cols=208 Identities=17% Similarity=0.198 Sum_probs=166.5
Q ss_pred CCcccC-CchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGK-DNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~-D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+ | +|+ +++.|+++||+++++.+ .+.+|+.+++++++ ++++.++.+++++..+++++++ .. .+++
T Consensus 67 i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~-~g~~~~~~~~ga~~~~~~~~~~-----~~-~~~~ 137 (326)
T 3b1n_A 67 MGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDL-DNNQITAFHPGAMMQSHVNHAG-----EA-KDIK 137 (326)
T ss_dssp EEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECT-TCCCEEEEECGGGGGGGGSCGG-----GC-CSCS
T ss_pred EEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECC-CCceEEEEecChhhhcChhhcc-----cc-cCCC
Confidence 478999 9 899 99999999999999986 45689999988876 5667665556666666665553 22 7899
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC---CCCh-h--h------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT---IRNI-N--Y------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p--~------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
+++++++. ++.+.++++.+++.| ++|+ + . +.++++++ ++|++|+..|++... .+.++
T Consensus 138 ~v~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~---~~~~~- 209 (326)
T 3b1n_A 138 LAIVGPDG----FQGMVQHTEELAQAGVPFIFDPGQGLPLFDGATLRRSIELATYIAVNDYEAKLVCDKTG---WSEDE- 209 (326)
T ss_dssp EEEECSCC----HHHHHHHHHHHHHHTCCEEECCGGGGGGCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHC---CCHHH-
T ss_pred EEEECCcc----HHHHHHHHHHHHHCCCEEEEeCchhhhhccHHHHHHHHHhCCEEecCHHHHHHHhCCCC---CCHHH-
Confidence 99997643 567888888888877 4554 2 1 23566665 999999999998632 23333
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
+.+ +++.||||+|++|++++++++.+++|+++++ .++||+||||+|+|||++++++|+++++|+++|+
T Consensus 210 ---l~~-------~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~ 277 (326)
T 3b1n_A 210 ---IAS-------RVQALIITRGEHGATIRHRDGTEQIPAVRAE--RVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLAS 277 (326)
T ss_dssp ---HHT-------TSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ---HHh-------cCCEEEEecCCCceEEEECCcEEEeCCCCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 333 4689999999999999998888888888872 4789999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcC
Q psy6977 224 WAAQHIIQVSGCTL 237 (239)
Q Consensus 224 ~~a~~~~~~~G~~~ 237 (239)
++|+.++++.|++.
T Consensus 278 ~~aa~~v~~~G~~~ 291 (326)
T 3b1n_A 278 LMGALKIAHQGPQT 291 (326)
T ss_dssp HHHHHHHTSSSTTC
T ss_pred HHHHHHHcCCCCCC
Confidence 99999999999874
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-32 Score=223.13 Aligned_cols=218 Identities=12% Similarity=0.122 Sum_probs=171.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc-hhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP-ENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~ 79 (239)
+|+||+ ++|+++++.|+++||+++++.+.+ +|++++.+ . +++++++...++ .+++++++.. +....++++++
T Consensus 56 ~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~--~-~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
T 2jg5_A 56 LGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL--K-TGQETEINAPGP--HITSTQFEQLLQQIKNTTSEDI 128 (306)
T ss_dssp EEEECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE--E-SSSEEEEECCCC--CCCHHHHHHHHHHHTTCCTTCE
T ss_pred EEEecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE--c-CCCEEEEECCCC--CCCHHHHHHHHHHHHhccCCCE
Confidence 478999 699999999999999999998754 47776654 3 456766655442 3444333210 00011578999
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhhH-H---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFIY-L---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~~-~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
++++|+.+. .+.+.+..+++.+++.+ ++|+ ..+.+++++ + ++|++|+..|++....+.+++.++++.+.+
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 208 (306)
T 2jg5_A 129 VIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVD 208 (306)
T ss_dssp EEEESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCHHHHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCChHHHHHHHHHHHHCCCEEEEECChHHHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 999987653 44578888999998877 6676 445566663 3 999999999987633333456677888877
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+ |++.|++|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 209 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~a~aa~~ 279 (306)
T 2jg5_A 209 K------GAQSVIVSLGGDGAIYIDKEISIKAVNPQG---KVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTAT 279 (306)
T ss_dssp T------TCSCEEEECGGGCEEEECSSEEEEEECCCC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred c------CCCEEEEccCCCceEEEeCCcEEEEeCCcc---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 899999999999999998888889998887 7999999999999999999999999999999999999999
Q ss_pred HHhcc
Q psy6977 230 IQVSG 234 (239)
Q Consensus 230 ~~~~G 234 (239)
+++.|
T Consensus 280 v~~~G 284 (306)
T 2jg5_A 280 AFDED 284 (306)
T ss_dssp HTSSS
T ss_pred HcCCC
Confidence 99999
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.1e-32 Score=221.32 Aligned_cols=207 Identities=21% Similarity=0.245 Sum_probs=167.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechh-hhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLA-AANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~-~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++.++ +++|+++.+.+ ++..+++++++. ..+++++
T Consensus 53 ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~--~g~~~~~~~~~~a~~~l~~~~~~~----~~l~~~~ 126 (313)
T 3ewm_A 53 ISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLK--GASPSFLLYDDVAYFNMTLNDINW----DIVEEAK 126 (313)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECS--SSSCEEEECCSSGGGCCCGGGCCH----HHHHHCS
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEec--CCCcceEeeccCHHHhCChhhCCH----HHhCCCC
Confidence 57899999999999999999999999885 5669998887765 46777666554 456787777763 5678899
Q ss_pred EEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh------------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 79 YYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY------------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 79 ~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~------------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++++|+.+. .+.+.+.++++.+++ + ++|+ +. +.++++++ ++|++|++.|.+...
T Consensus 127 ~~~~~g~~~~~~~~~~~~~~~~~~a~~-~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~- 204 (313)
T 3ewm_A 127 IVNFGSVILARNPSRETVMKVIKKIKG-SSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGV- 204 (313)
T ss_dssp EEEEESGGGGSTTHHHHHHHHHHHHBT-TBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTC-
T ss_pred EEEEcCcccCCcchHHHHHHHHHHhcc-CCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCc-
Confidence 9999997653 445788899998884 5 4444 22 12455555 899999988875410
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHH--cCC
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLI--KGE 213 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~--~g~ 213 (239)
.. .+.+.||||+|++|++++++++.+++|++++ +++||+||||+|+|||+++++ +|+
T Consensus 205 -------------~~-----~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~l~~~~g~ 263 (313)
T 3ewm_A 205 -------------EV-----KGSMLTAITLGPKGCRLIKNETVVDVPSYNV---NPLDTTGAGDAFMAALLVGILKLKGL 263 (313)
T ss_dssp -------------CC-----CCSSEEEEECGGGEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHHSSSC
T ss_pred -------------cc-----cCceEEEEEECCCCeEEEECCeeEEcCCCCc---ccCCCCCchHHHHHHHHHHHHhcCCC
Confidence 11 2556789999999999999999999999988 899999999999999999998 999
Q ss_pred CHHHHHHHHHHHHHHHHHhccCc
Q psy6977 214 PLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 214 ~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
++++|+++|+++|+.++++.|+.
T Consensus 264 ~l~~a~~~A~~~aa~~v~~~G~~ 286 (313)
T 3ewm_A 264 DLLKLGKFANLVAALSTQKRGAW 286 (313)
T ss_dssp CHHHHHHHHHHHHHHHTTSCSSC
T ss_pred CHHHHHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999984
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-32 Score=222.51 Aligned_cols=212 Identities=17% Similarity=0.122 Sum_probs=168.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+| +|+ +++.|+++||+++++.+. +.+|+.+++++++ +++|+++.+++++..+++++++. ....++++++
T Consensus 77 i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-~g~~~~~~~~ga~~~~~~~~~~~--~~~~l~~~~~ 151 (334)
T 2pkf_A 77 VGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDV-DMAQIASFYPGAMSEARNIKLAD--VVSAIGKPEL 151 (334)
T ss_dssp ECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECT-TCCEEEEEECGGGGGGGGCCHHH--HHHHHCSCSE
T ss_pred EEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcC-CCCEEEEECCchhhhCCHhhcCh--hhhhhcCCCE
Confidence 5789999 999 999999999999998864 5689999888876 56777655666666666655542 1134578999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh---hh------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI---NY------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p~------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
+|++++. ++.+.++++.+++.| ++|+ +. +.++++++ ++|++|+..|++... .+.++
T Consensus 152 v~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~-- 222 (334)
T 2pkf_A 152 VIIGAND----PEAMFLHTEECRKLGLAFAADPSQQLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTG---WSEAD-- 222 (334)
T ss_dssp EEEESCC----HHHHHHHHHHHHHHTCCEEEECGGGGGTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHC---CCHHH--
T ss_pred EEEcCCC----hHHHHHHHHHHHhcCCeEEEeccchhhhhhHHHHHHHHhcCCEEecCHHHHHHHhccCC---CCHHH--
Confidence 9998653 567788888888777 4554 21 22455555 999999999998632 23332
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-EEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGK-TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
+.+ +++.||||+|++|++++++++ .+++|+++++ .++||+||||+|+|||++++++|+++++|+++|+
T Consensus 223 --l~~-------~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~ 291 (334)
T 2pkf_A 223 --VMA-------QIDLRVTTLGPKGVDLVEPDGTTIHVGVVPET--SQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGS 291 (334)
T ss_dssp --HHT-------TCSCEEEECGGGCEEEECTTSCEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred --HHh-------cCCEEEEEeCCCCeEEEeCCCcEEEeCCcCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 333 368999999999999998877 8888888872 4789999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcC
Q psy6977 224 WAAQHIIQVSGCTL 237 (239)
Q Consensus 224 ~~a~~~~~~~G~~~ 237 (239)
++|+.++++.|++.
T Consensus 292 ~~aa~~v~~~G~~~ 305 (334)
T 2pkf_A 292 LVAVLVLESTGTQE 305 (334)
T ss_dssp HHHHHHHTSSSSSC
T ss_pred HHHHHHHhCCCCCc
Confidence 99999999999874
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-30 Score=211.18 Aligned_cols=212 Identities=20% Similarity=0.257 Sum_probs=164.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEE-ecCCCceeEeechhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLI-TDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~-~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+| +|+.+++.|+++||+++++.+. +.+|....-.. ...+..+++....+....+.++ +. +.+++++
T Consensus 49 ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~ 121 (313)
T 3kd6_A 49 VGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH-VP-----QYYRDSK 121 (313)
T ss_dssp EEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC-CC-----GGGTTCS
T ss_pred EEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc-ch-----HHHccCC
Confidence 5789999 9999999999999999999865 45674321111 1113344444444444455442 22 5678999
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC---CCCh-h--------hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT---IRNI-N--------YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p--------~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
++++++ ++++....+++.+ +.+ ++|+ + .+.++++++ ++|++|+..|++. ++++++
T Consensus 122 ~v~~~~----~~~~~~~~~~~~~-~~~~~v~~Dp~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~ 191 (313)
T 3kd6_A 122 FVCLGN----IDPELQLKVLDQI-DDPKLVVCDTMNFWIEGKPEELKKVLARVDVFIVNDSEARLLSGD-----PNLVKT 191 (313)
T ss_dssp EEEECS----SCHHHHHHHHTTC-SSCSEEEEECCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHSC-----SCHHHH
T ss_pred EEEEcC----CCHHHHHHHHHHH-hhCCEEEEcChhhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhCC-----CCHHHH
Confidence 999954 3456667777777 344 4554 2 223566655 9999999999975 688889
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC-----CHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE-----PLSVC 218 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~-----~~~~a 218 (239)
++.+.++ |++.||||+|++|++++++++.+++|++++. +++||+||||+|+|||++++++|. ++++|
T Consensus 192 ~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~a 263 (313)
T 3kd6_A 192 ARIIREM------GPKTLIIKKGEHGALLFTDNGIFAAPAFPLE--SIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKA 263 (313)
T ss_dssp HHHHHTT------SCSEEEEECTTSCEEEEETTEEEEECCCTTC--CCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred HHHHHHc------CCCEEEEeeCCCcEEEEECCceEEeCCCCCC--CcCCCCCccHHHHHHHHHHHHcCCCccccCHHHH
Confidence 9999885 8999999999999999999998999988762 699999999999999999999998 89999
Q ss_pred HHHHHHHHHHHHHhccCcC
Q psy6977 219 IECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 219 ~~~a~~~a~~~~~~~G~~~ 237 (239)
+++|+++|+.++++.|++.
T Consensus 264 ~~~a~~~aa~~v~~~G~~~ 282 (313)
T 3kd6_A 264 VLYGSAMASFCVEQFGPYR 282 (313)
T ss_dssp HHHHHHHHHHHTTSSTTGG
T ss_pred HHHHHHHHHHHHeecCCCC
Confidence 9999999999999999874
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-30 Score=209.46 Aligned_cols=195 Identities=24% Similarity=0.281 Sum_probs=158.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+| +|+.+++.|+++||+++++.+ ++.+|+.+++++++ ++|+++.+++++..++ ++++ +++++
T Consensus 76 i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~--g~r~~~~~~ga~~~~~-~~l~--------~~~~~ 143 (306)
T 3bf5_A 76 YSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG--KKQVSFMHQGAMAAWA-PQLA--------DEYEY 143 (306)
T ss_dssp EEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS--SCEEEEEECTHHHHCC-CCCC--------SCEEE
T ss_pred EEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC--CeeEEEEeCChhhhhh-Hhhc--------CCCCE
Confidence 4789999 999999999999999999864 56689999988874 6777777777777776 4432 68999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC-CCCh-hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT-IRNI-NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g-~~~~-p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
+|++++. .+.++++.+++ - ++|+ +. +.++++++ ++|++|+..|++.......
T Consensus 144 v~~~~~~------~~~~~~~~a~~-~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-------- 208 (306)
T 3bf5_A 144 VHFSTGP------NYLDMAKSIRS-KIIFDPSQEIHKYSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP-------- 208 (306)
T ss_dssp EEECSSS------SHHHHHHHCCS-EEEECCGGGGGGSCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC--------
T ss_pred EEECChH------HHHHHHHHhCC-cEEEcCchhhhhccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc--------
Confidence 9998654 45677777765 4 4555 32 23566665 9999999999886321110
Q ss_pred HhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHH
Q psy6977 147 ISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226 (239)
Q Consensus 147 l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a 226 (239)
++ .||||+|++|++++++++.+++|++++ + +||+||||+|+|||++++++|+++++|+++|+++|
T Consensus 209 --~l---------~vvvT~G~~Ga~~~~~~~~~~~~~~~v---~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~a 273 (306)
T 3bf5_A 209 --KV---------TTIVTNGERGSSLFMDGKKYDFPAIPS---S-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTIIA 273 (306)
T ss_dssp --SS---------CEEEEEGGGEEEEEETTEEEEEECCCC---C-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred --cE---------EEEEeecccCeEEEeCCcEEEecCCcC---C-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 21 199999999999999888889999887 7 99999999999999999999999999999999999
Q ss_pred HHHHHh--ccCcC
Q psy6977 227 QHIIQV--SGCTL 237 (239)
Q Consensus 227 ~~~~~~--~G~~~ 237 (239)
+.++++ .|++.
T Consensus 274 a~~v~~~~~G~~~ 286 (306)
T 3bf5_A 274 HHVIDDGIENFSL 286 (306)
T ss_dssp HHHHHHCSTTCCC
T ss_pred HHHhccCCccccc
Confidence 999999 99864
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=216.46 Aligned_cols=206 Identities=14% Similarity=0.123 Sum_probs=158.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|. +.+++.|+++||+++++.. +.+|+...++ ++ +++++++...+++..+++++++ . ..++++
T Consensus 56 i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~-~~-~g~~~~~~~~~~~~~l~~~~~~-----~--~~~~~v 123 (298)
T 1vk4_A 56 ITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRY-GS-DPDTRESFLISAADPFTESDLA-----F--IEGEAV 123 (298)
T ss_dssp EEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC-------CCEEEEEECCCCCCGGGGG-----G--CCSSEE
T ss_pred EEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEE-cC-CCCeeEEEeccccccCCHHHcC-----c--CCCCEE
Confidence 47899997 7899999999999999875 3466655443 43 4455555555555566554442 1 578999
Q ss_pred EEecccc-ccChHHHHHHHHHhhhCC---CCCh-h----------------hHHHHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 81 YVSGFFL-TVSPESILEVAKVALSCT---IRNI-N----------------YLHHRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 81 ~~~g~~~-~~~~~~~~~~~~~~~~~g---~~~~-p----------------~~~~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
+++++.. +.+ .++++.+++.| ++|+ + .+.++++++ ++|++|+..|++.
T Consensus 124 ~~~~~~~~~~~----~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~---- 195 (298)
T 1vk4_A 124 HINPLWYGEFP----EDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGT---- 195 (298)
T ss_dssp EECCSSTTSSC----GGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSC----
T ss_pred EECCccccccc----HHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcccCCEEecCHHHHHHHhCC----
Confidence 9987633 233 35556666666 5555 3 223567765 9999999999875
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHc-CCCH
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIK-GEPL 215 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~-g~~~ 215 (239)
++++++++.+.++ |++.||||+ ++|++++++ +.+++|++++ +++||+||||+|+|||++++++ |+++
T Consensus 196 -~~~~~~~~~l~~~------g~~~vvvT~-~~G~~~~~~-~~~~~~~~~v---~vvDttGAGDaF~a~~~~~l~~~g~~~ 263 (298)
T 1vk4_A 196 -NDLRESCRIIRSF------GAKIILATH-ASGVIVFDG-NFYEASFRSW---SLEGRTGRGDTCTAAFLVGFVFKKMSI 263 (298)
T ss_dssp -SCHHHHHHHHHHT------TCSSEEEEE-TTEEEEESS-SEEEEECCCS---SGGGGTTHHHHHHHHHHHHHHTSCCCH
T ss_pred -CCHHHHHHHHHhc------CCCEEEEEc-CCCcEEEeC-CEEEeccCCc---ccCCCcCccHHHHHHHHHHHHHcCCCH
Confidence 4788888888885 899999999 999999887 7788888887 8999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHhccCcCC
Q psy6977 216 SVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
++|+++|+++|+.++++.|+..+
T Consensus 264 ~~a~~~A~a~aa~~v~~~G~~~~ 286 (298)
T 1vk4_A 264 EKATKFAAAVTSVKMRHPGPLRR 286 (298)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCG
T ss_pred HHHHHHHHHHHHHHHccCCCCCC
Confidence 99999999999999999998753
|
| >2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=175.83 Aligned_cols=201 Identities=15% Similarity=0.201 Sum_probs=140.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC--CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc-hhh-hc-cc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD--TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP-ENN-KL-IQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~--~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~-~~~-~~-~~ 75 (239)
+|.||+|. |+++ |+++||+++++.+. ..+|+..+ ..+ ..+++++++.. +.+ .. +.
T Consensus 16 ~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~--------------~~g--~~l~~~~i~~~~~~~~~~~~~ 75 (312)
T 2yxt_A 16 RGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH--------------WKG--QVLNSDELQELYEGLRLNNMN 75 (312)
T ss_dssp SSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC--------------CCE--EECCHHHHHHHHHHHHHTTCC
T ss_pred CCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC--------------ccC--ccCCHHHHHHHHHHHHhcCCc
Confidence 58999998 9999 99999999998752 22333221 011 23333333210 000 11 56
Q ss_pred ceeEEEEeccccc-cChHHHHHHHHHhhhCC-----CCCh---h----------------hHHH-HhhHH---hcCHHHH
Q psy6977 76 NAEYYYVSGFFLT-VSPESILEVAKVALSCT-----IRNI---N----------------YLHH-RFIYL---VLIDFEA 126 (239)
Q Consensus 76 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g-----~~~~---p----------------~~~~-~~~~~---~~n~~E~ 126 (239)
+++++++ |+... ...+.+.++++.+++.| ++|+ + .+.+ +++++ ++|++|+
T Consensus 76 ~~~~v~~-G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~Ea 154 (312)
T 2yxt_A 76 KYDYVLT-GYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFEA 154 (312)
T ss_dssp CCSEEEE-CCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHHHH
T ss_pred cCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHHHH
Confidence 7899775 55432 11345567888888765 2453 1 1222 66665 9999999
Q ss_pred HHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC------cEEEE-------EC-C----eEEEEeccCCCC
Q psy6977 127 LAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK------PIILS-------QN-G----KTTEFPVQRLPA 188 (239)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~------G~~~~-------~~-~----~~~~~~~~~~~~ 188 (239)
+.|++....+.+++.++++.++++ |++.||||.|+. |++++ ++ + +.++++++++
T Consensus 155 ~~L~g~~~~~~~~~~~~~~~l~~~------g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-- 226 (312)
T 2yxt_A 155 ELLSGRKIHSQEEALRVMDMLHSM------GPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKV-- 226 (312)
T ss_dssp HHHHSCCCCSHHHHHHHHHHHHHH------SCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECC--
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHc------CCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeeccc--
Confidence 999986433345677888888874 899999998876 47665 44 2 6778888887
Q ss_pred CCcccCCCCchhhhHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHh
Q psy6977 189 ESVVDTNGAGDSFVGGFLSQLIK-GEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 189 ~~vvdt~GaGDaf~ag~~~~l~~-g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++ ||+||||+|+|+|++++++ |+++++|+++|+++++.++++
T Consensus 227 -~v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 227 -DA-VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp -SS-CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred -CC-CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 66 9999999999999999998 999999999999999888764
|
| >2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-23 Score=167.05 Aligned_cols=206 Identities=12% Similarity=0.107 Sum_probs=142.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhh--cccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNK--LIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~--~~~~ 76 (239)
+|.+|+| ..+..|++.||++.++.+ . ++.+. .+.+.+ .+ ..++++++... .+.+ .+++
T Consensus 27 ~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~-~g~~~~---~g--~~~~~~~~~~~~~~l~~~~~~~~ 88 (283)
T 2ddm_A 27 YGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNT-PHYDTF---YG--GAIPDEWFSGYLRALQERDALRQ 88 (283)
T ss_dssp SSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSC-TTSSCC---CE--EECCHHHHHHHHHHHHHTTCCTT
T ss_pred CCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccC-CCcCce---ee--eeCCHHHHHHHHHHHHhcCCccc
Confidence 4678877 356789999999998853 1 12222 333331 11 23333333210 1112 4567
Q ss_pred eeEEEEeccccccChHHHHHHHHHhhh--CC---CCCh---h---------h-H----HHHhhHH---hcCHHHHHHHHH
Q psy6977 77 AEYYYVSGFFLTVSPESILEVAKVALS--CT---IRNI---N---------Y-L----HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~--~g---~~~~---p---------~-~----~~~~~~~---~~n~~E~~~l~~ 131 (239)
+++++++........+.+.++++.+++ .| ++|+ + . . .++++++ ++|..|++.|++
T Consensus 89 ~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 168 (283)
T 2ddm_A 89 LRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTG 168 (283)
T ss_dssp CCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHT
T ss_pred CCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhC
Confidence 899988433222234677788888886 45 5553 2 1 1 1355655 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC-------cEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK-------PIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~-------G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
....+.++..++++++.++ |++.||+|.|++ |++++++++.++++++++ . +||+||||+|+|+
T Consensus 169 ~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v---~-vdt~GAGDaf~a~ 238 (283)
T 2ddm_A 169 KNCRDLDSAIAAAKSLLSD------TLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRV---K-TDLKGTGDLFCAQ 238 (283)
T ss_dssp SCCSSHHHHHHHHHHHCCS------SCCEEEEEC-------CEEEEEEEETTEEEEEEEECC---C-CCCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHc------CCCEEEEccccCccCCCceeEEEEeCCceEEEeecee---C-CCCCChHHHHHHH
Confidence 6433345677777888774 899999999999 889888888888888876 4 7999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhcc
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQVSG 234 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~~G 234 (239)
|++++++|+++++|+++|+++++.++++..
T Consensus 239 ~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 239 LISGLLKGKALTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998754
|
| >1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=145.98 Aligned_cols=146 Identities=10% Similarity=0.078 Sum_probs=111.0
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh-hh---------------HH-HHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI-NY---------------LH-HRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~-p~---------------~~-~~~~~~---~~n~~E~~~l~~ 131 (239)
+++++++ |+. .+.+.+..+++.+++.+ ++|+ +. +. ++++++ ++|..|++.|++
T Consensus 94 ~~~~v~~-G~l--~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g 170 (288)
T 1jxh_A 94 RIDTTKI-GML--AETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLD 170 (288)
T ss_dssp CCSEEEE-CCC--CSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHT
T ss_pred CCCEEEE-CCC--CCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcC
Confidence 3677776 432 25678888888888776 3453 11 22 255654 999999999998
Q ss_pred H-cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-----EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 132 Q-QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-----IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 132 ~-~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
. ...+.++.+++++.+.++ |++.||+|.|.+| ++++++++.++++++++ +++||+||||+|+|+|
T Consensus 171 ~~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~---~~vdttGAGD~f~a~~ 241 (288)
T 1jxh_A 171 APHARTEQEMLAQGRALLAM------GCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRV---NTKNTHGTGCTLSAAL 241 (288)
T ss_dssp CCCCCSHHHHHHHHHHHHHT------TCSEEEEBC---------CEEECSSCEEEC---CC---CCSCCBTHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHh------CCCEEEEeccCCCCCceeEEEEECCeEEEEecccc---CCCCCCCchHHHHHHH
Confidence 6 433445677788888875 8899999999999 88888777888888887 7999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
++++++|.++++|+++|+++++.++++.
T Consensus 242 ~a~l~~g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 242 AALRPRHRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999776
|
| >1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.1e-19 Score=140.19 Aligned_cols=146 Identities=16% Similarity=0.168 Sum_probs=113.5
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh---h-------------hH-HHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI---N-------------YL-HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~---p-------------~~-~~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+++ |+.. +.+.+..+++.+++.+ ++|+ + .+ .++++++ ++|..|++.|++
T Consensus 70 ~~~~v~~-G~l~--~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKT-GALG--DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEE-CCCC--SHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CCCEEEE-CCcC--CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC
Confidence 3677766 4322 4567778888887754 4554 1 11 1345544 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC-c----EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK-P----IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL 206 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~-G----~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~ 206 (239)
....+.+++.++++++.++ |++.||+|.|++ | ++++++++.++++++++ +++||+||||+|+|+|+
T Consensus 147 ~~~~~~~~~~~~a~~l~~~------g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~~~ 217 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKALLAL------GPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRV---HTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHHHTT------SCSCEEEEEEECC---EEEEEEETTEEEEEEECCC---CCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHc------CCCEEEEccCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHHHH
Confidence 6433335677788888874 889999999998 8 78888888888888887 79999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 207 SQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 207 ~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
+++++|.++++|+++|+++++.++++.
T Consensus 218 ~~l~~g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 218 ALLAKGRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988764
|
| >3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.2e-18 Score=137.52 Aligned_cols=149 Identities=14% Similarity=0.167 Sum_probs=114.7
Q ss_pred ccceeEEEEeccccc-cChHHHHHHHHHhhhCC-----CCCh---h-------------hHH-HHhhHH---hcCHHHHH
Q psy6977 74 IQNAEYYYVSGFFLT-VSPESILEVAKVALSCT-----IRNI---N-------------YLH-HRFIYL---VLIDFEAL 127 (239)
Q Consensus 74 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g-----~~~~---p-------------~~~-~~~~~~---~~n~~E~~ 127 (239)
+.+.|++ .+|+... ...+.+.++++.+++.+ ++|+ + .+. .+++++ +||..|++
T Consensus 75 l~~~d~v-~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~ 153 (289)
T 3pzs_A 75 LKDCDAV-LSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELE 153 (289)
T ss_dssp GGGCCEE-EECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHH
T ss_pred ccCCCEE-EECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHH
Confidence 3578885 5677654 23467788888877544 4552 1 112 255555 99999999
Q ss_pred HHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeC-CCcE-------EEEECCeEEEEeccCCCCCCc--ccCCCC
Q psy6977 128 AFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQG-DKPI-------ILSQNGKTTEFPVQRLPAESV--VDTNGA 197 (239)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G-~~G~-------~~~~~~~~~~~~~~~~~~~~v--vdt~Ga 197 (239)
.|+|....+.++..+++++++++ |++.|++|.| .+|+ +++++++.++++.+++ ++ +|++|+
T Consensus 154 ~L~g~~~~~~~~~~~aa~~l~~~------g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~dt~Ga 224 (289)
T 3pzs_A 154 QLSGERVENVEQAVQVARSLCAR------GPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLV---DFGKRQPVGV 224 (289)
T ss_dssp HHHTSCCCSHHHHHHHHHHHHTT------SCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECC---CCTTSCCTTH
T ss_pred HHhCCCCCCHHHHHHHHHHHHHH------CCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeee---cCCCCCCCcH
Confidence 99997544456677888888875 8999999985 4776 7777777888888887 45 999999
Q ss_pred chhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 198 GDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 198 GDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
||+|.|+|++++.+|.++++|+++|+++++.++.+
T Consensus 225 GD~f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 225 GDLTSGLLLVNLLKGEPLDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988777765
|
| >2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.1e-18 Score=135.36 Aligned_cols=146 Identities=20% Similarity=0.161 Sum_probs=115.2
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh---h-------------hHH-HHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI---N-------------YLH-HRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~---p-------------~~~-~~~~~~---~~n~~E~~~l~~ 131 (239)
+++++++ |+.. +.+.+..+++.+++.+ ++|+ + .+. ++++++ +||..|++.|++
T Consensus 74 ~~d~v~~-G~l~--~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKT-GMLP--TVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEE-CCCC--SHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT
T ss_pred CCCEEEE-CCCC--CHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC
Confidence 5788887 4422 3577778888887765 3443 1 122 455654 999999999998
Q ss_pred Hc-CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCC--CcE----EEEECCeEEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 132 QQ-NFQTEDLHAIALKISNLPKQNPNRERITIITQGD--KPI----ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 132 ~~-~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
.. ..+.++..++++.+.++ |++.||+|.|. +|+ +++++++.++++++++ +++||+||||+|+|+
T Consensus 151 ~~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~ 221 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKIHAL------GAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (271)
T ss_dssp CCCCCSHHHHHHHHHHHHTT------TCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCC---CCSCCBTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHh------CCCEEEEcCCCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHH
Confidence 64 33334677788888874 88999999999 784 6677777888888887 799999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
|++++++|.++++|+++|+++++.++++.
T Consensus 222 ~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 222 VTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999875
|
| >3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=127.84 Aligned_cols=145 Identities=14% Similarity=0.096 Sum_probs=112.3
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhC-C---CCCh---h--------------hHHHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSC-T---IRNI---N--------------YLHHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-g---~~~~---p--------------~~~~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+.. +.+.+..+.+..++. + ++|+ + .+.++++++ +||..|++.|+|
T Consensus 74 ~~daik~-G~l~--s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALI-GYVG--SVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEE-CCCC--SHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHT
T ss_pred ccCEEEE-CCCC--CHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhC
Confidence 6788887 5543 455555555555554 2 3443 1 112566665 899999999999
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCc-eEEEEeeCC----CcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRE-RITIITQGD----KPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~vvvt~G~----~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
....+.++.+++++.+.++ .|+ +.|++|.|. .|+++++ +++.++++.+++ . +||+|+||+|.|+|
T Consensus 151 ~~~~~~~~~~~aa~~L~~~-----~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v---~-~dt~GaGD~fsaai 221 (282)
T 3h74_A 151 APYQVTPDLEVILPALQAQ-----LKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL---P-GHYNGTGDTLAAVI 221 (282)
T ss_dssp CCCCSSCCHHHHHHHHHTT-----SCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC---S-SCCTTHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH-----hCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC---C-CCCcCHHHHHHHHH
Confidence 7554557899999999883 288 999999984 7888885 666778888776 4 89999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++++++|.++++|+++|+++++.++++
T Consensus 222 ~a~l~~g~~l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 222 AGLLGRGYPLAPTLARANQWLNMAVAE 248 (282)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888865
|
| >3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.3e-16 Score=126.40 Aligned_cols=146 Identities=14% Similarity=0.164 Sum_probs=109.4
Q ss_pred ceeEEEEeccccccC-hHHHHHHHHHhhhCC---CCCh---hh--------------HHHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVS-PESILEVAKVALSCT---IRNI---NY--------------LHHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~g---~~~~---p~--------------~~~~~~~~---~~n~~E~~~l~~ 131 (239)
..+.+.+ |+..... -+.+.++++.+++.+ ++|+ +. +.++++++ +||..|++.|+|
T Consensus 77 ~~~aik~-G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g 155 (291)
T 3mbh_A 77 QFDAIYT-GYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLD 155 (291)
T ss_dssp CCSEEEE-CCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHT
T ss_pred ccCEEEE-CCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhC
Confidence 6778887 6543311 256666777665444 4554 21 12566665 899999999998
Q ss_pred HcCC---CccCHHHHHHHHhcCCCCCCCCceEEEEeeCC-------CcEEEEEC--CeEEEEeccCCCCCCcccCCCCch
Q psy6977 132 QQNF---QTEDLHAIALKISNLPKQNPNRERITIITQGD-------KPIILSQN--GKTTEFPVQRLPAESVVDTNGAGD 199 (239)
Q Consensus 132 ~~~~---~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~-------~G~~~~~~--~~~~~~~~~~~~~~~vvdt~GaGD 199 (239)
.... +.++.+++++.++++ |++.|+||.|. .|++++++ ++.++++.+++ . +||+|+||
T Consensus 156 ~~~~~~~~~~~~~~aa~~L~~~------g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~---~-~dt~GaGD 225 (291)
T 3mbh_A 156 EPYKADSTDEELKEYLRLLSDK------GPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYL---P-AHYPGTGD 225 (291)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHT------SCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCC---G-GGSTTHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhh------CCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEeccc---C-CCCCChHH
Confidence 7422 345677888888885 89999999653 57778776 35667887765 4 89999999
Q ss_pred hhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 200 SFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 200 af~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
+|.|+|++++++|.++++|+++|+++++.++.+
T Consensus 226 ~f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~ 258 (291)
T 3mbh_A 226 TFTSVITGSLMQGDSLPMALDRATQFILQGIRA 258 (291)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998887764
|
| >3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-15 Score=123.93 Aligned_cols=146 Identities=18% Similarity=0.093 Sum_probs=106.1
Q ss_pred cceeEEEEecccccc-ChHHHHHHHHHhhhC-------C--CCCh---h------------hHHHHhhHH---hcCHHHH
Q psy6977 75 QNAEYYYVSGFFLTV-SPESILEVAKVALSC-------T--IRNI---N------------YLHHRFIYL---VLIDFEA 126 (239)
Q Consensus 75 ~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~-------g--~~~~---p------------~~~~~~~~~---~~n~~E~ 126 (239)
.++|++.. |+.... .-+.+.++++..++. . ++|+ + .+.++++++ +||..|+
T Consensus 75 ~~~daV~t-G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~Ea 153 (300)
T 3zs7_A 75 SNYRYILT-GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFEA 153 (300)
T ss_dssp GGCSEEEE-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHHH
T ss_pred ccCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHHH
Confidence 57887655 776542 225566666665432 2 3333 1 122566766 9999999
Q ss_pred HHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-------EEEEEC------CeEEEEeccCCCCCCccc
Q psy6977 127 LAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-------IILSQN------GKTTEFPVQRLPAESVVD 193 (239)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-------~~~~~~------~~~~~~~~~~~~~~~vvd 193 (239)
+.|+|....+.++..++++.++++ |++.|+||.|..| +++..+ ++.++++.+++ ++ |
T Consensus 154 ~~L~g~~~~~~~~~~~aa~~L~~~------G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v---~~-~ 223 (300)
T 3zs7_A 154 SLLSGVTVNDLSSAILAADWFHNC------GVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYH---EG-R 223 (300)
T ss_dssp HHHHSSCCCSHHHHHHHHHHHHHH------TCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECC---SS-C
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHh------CCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccC---CC-C
Confidence 999987544456777888888885 9999999999988 333334 46778888887 44 8
Q ss_pred CCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 194 TNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 194 t~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++|+||+|.|+|++++ +|.++++|+++|.++...++.+
T Consensus 224 ~~GtGD~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 224 YTGTGDVFAACLLAFS-HSHPMDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp BTTHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999987776654
|
| >1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=8e-14 Score=111.30 Aligned_cols=156 Identities=12% Similarity=0.014 Sum_probs=102.4
Q ss_pred hhhhccCCCCCCCchhhhcccceeEEEE-eccccccChHHHHHHHHHhhhCC---CCCh------hhH----HHHhh--H
Q psy6977 55 AAANLFTPDHLHVPENNKLIQNAEYYYV-SGFFLTVSPESILEVAKVALSCT---IRNI------NYL----HHRFI--Y 118 (239)
Q Consensus 55 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g---~~~~------p~~----~~~~~--~ 118 (239)
+++..+. +++++ ..+.++.++++++ .|.......+.+..+++.+++.+ ++|+ +.. .++++ +
T Consensus 40 Ga~p~m~-~~~~e--~~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~ 116 (272)
T 1ekq_A 40 GASPVMA-YAKEE--VADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVR 116 (272)
T ss_dssp TCEEECC-CCTTT--HHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSC
T ss_pred CCchhhc-CCHHH--HHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCC
Confidence 4444444 34443 2356678898888 34311112356777788777777 5555 221 15665 3
Q ss_pred H---hcCHHHHHHHHHHc-C--------CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCC
Q psy6977 119 L---VLIDFEALAFAKQQ-N--------FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRL 186 (239)
Q Consensus 119 ~---~~n~~E~~~l~~~~-~--------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 186 (239)
. +||..|++.|+|.. . .+.++..++++.+.++ +...|++| |..+ ++.++++.++++.+..
T Consensus 117 ~~vitPN~~E~~~L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~------~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~ 188 (272)
T 1ekq_A 117 LAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQK------LNTVIAIT-GEVD-VIADTSHVYTLHNGHK 188 (272)
T ss_dssp CSEEEECHHHHHHHCC---------------HHHHHHHHHHHHH------HTSEEEEC-SSSE-EEECSSCEEEECCCCG
T ss_pred CeEECCCHHHHHHHhCCCcccccCccCCCCHHHHHHHHHHHHHH------cCCEEEEE-CCCC-EEEeCCEEEEEcCCCc
Confidence 2 99999999998763 2 2334566777777764 22345555 9887 5556666777776554
Q ss_pred CCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 187 PAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 187 ~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
.+.|++|+||+|.|.+.+.+.+|.++.+|+++|+.
T Consensus 189 ---~~~~ttGaGD~lag~iaa~la~g~~~~~A~~~A~~ 223 (272)
T 1ekq_A 189 ---LLTKVTGAGCLLTSVVGAFCAVEENPLFAAIAAIS 223 (272)
T ss_dssp ---GGGGSTTHHHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred ---cccCccCchHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 67899999999988888888889999999999986
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.7e-12 Score=111.15 Aligned_cols=143 Identities=15% Similarity=0.177 Sum_probs=101.6
Q ss_pred ceeEEEEeccccccChHH---HHHHHHHhhhCC---CCCh---h----h---------HH-HHhhHH---hcCHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPES---ILEVAKVALSCT---IRNI---N----Y---------LH-HRFIYL---VLIDFEALAF 129 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~g---~~~~---p----~---------~~-~~~~~~---~~n~~E~~~l 129 (239)
+.+.+.+ |+. +.+. +.++++..++.+ ++|+ . . +. ++++.+ +||..|++.|
T Consensus 91 ~~daIki-G~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKT-GML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEE-CSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEE-CCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHH
Confidence 6888888 443 4544 444454443334 4444 1 1 11 455555 8999999999
Q ss_pred HHHc--CCCccCHHHHHHHHhcCCCCCCCCc-eEEEEeeCCCc--------E--EEE--ECCeEEEEeccCCCCCCcccC
Q psy6977 130 AKQQ--NFQTEDLHAIALKISNLPKQNPNRE-RITIITQGDKP--------I--ILS--QNGKTTEFPVQRLPAESVVDT 194 (239)
Q Consensus 130 ~~~~--~~~~~~~~~~~~~l~~~~~~~~~g~-~~vvvt~G~~G--------~--~~~--~~~~~~~~~~~~~~~~~vvdt 194 (239)
+|.. ..+.++..++++.+.++ |. +.||||.|..+ + +++ .+++.++++.+.+ +++||
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L~~~------g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v---~~~~t 237 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDLAKI------TKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFV---NTTHT 237 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHHHHH------HCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECC---CCSCC
T ss_pred hCCCCCCCCHHHHHHHHHHHHHh------CCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCc---CCCCC
Confidence 9863 23345678888888885 55 89999998763 3 455 3566778888887 67899
Q ss_pred CCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 195 NGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 195 ~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+|+||+|.|++++.+++|.++.+|+++|+..-...+.
T Consensus 238 ~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 238 HGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp BTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999975544443
|
| >1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A | Back alignment and structure |
|---|
Probab=98.89 E-value=1.4e-08 Score=80.42 Aligned_cols=140 Identities=11% Similarity=0.067 Sum_probs=94.6
Q ss_pred hhcccceeEEEEecccccc-ChH---HHHHHHHHhhhCC---CCCh------hhH----HHHhhH---H-hcCHHHHHHH
Q psy6977 71 NKLIQNAEYYYVSGFFLTV-SPE---SILEVAKVALSCT---IRNI------NYL----HHRFIY---L-VLIDFEALAF 129 (239)
Q Consensus 71 ~~~~~~~~~~~~~g~~~~~-~~~---~~~~~~~~~~~~g---~~~~------p~~----~~~~~~---~-~~n~~E~~~l 129 (239)
.+.++.++++++. +.+ +.+ .+..+++.+++.+ ++|+ +.. .++++. + +||..|+..|
T Consensus 51 ~~~~~~~dalvi~---~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 51 EEMIRLADAVVIN---IGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHCSEEEEE---CTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHCCEEEEE---ECCCCHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHH
Confidence 3677889999994 222 332 4555666676666 5665 121 234432 2 8999999999
Q ss_pred HHHcC----CC----c-cCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 130 AKQQN----FQ----T-EDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 130 ~~~~~----~~----~-~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
+|... .+ . ++..++++.+.++ +...|++| |..+.+ ++++..++++.... ...+++|+||+
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~la~~------~~~~Vvlk-G~~d~i-~~~~~~~~~~~g~~---~~~~~~GtGD~ 196 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAARE------FNTTVAVT-GAVDYV-SDGRRTFAVYNGHE---LLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHHHH------TTSEEEEE-SSSEEE-ECSSCEEEECCCCG---GGGGSTTHHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHHHHH------hCcEEEEc-CCCcEE-EcCCEEEEEcCCCc---CcCCccChhHH
Confidence 99742 11 1 4566777888775 33456666 877754 46666777766543 45699999999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
|.|.+...+.+|.+ .+|+..|...
T Consensus 197 Lsg~iaa~lA~g~~-~~Aa~~a~~~ 220 (265)
T 1v8a_A 197 VAALTGAFVAVTEP-LKATTSALVT 220 (265)
T ss_dssp HHHHHHHHHTTSCH-HHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-HHHHHHHHHH
Confidence 99999999999999 8887776653
|
| >2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A | Back alignment and structure |
|---|
Probab=98.48 E-value=8.7e-07 Score=71.64 Aligned_cols=140 Identities=14% Similarity=0.114 Sum_probs=82.1
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---hhHHH---Hhh--H--H-hcCHHHHHHHHHHcC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---NYLHH---RFI--Y--L-VLIDFEALAFAKQQN 134 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p~~~~---~~~--~--~-~~n~~E~~~l~~~~~ 134 (239)
..++.++.+.++ ..+..+. +.+.++++..+ .+ ++|+ ..+.. +++ . + +||..|++.|+|...
T Consensus 107 ~~~~~~dav~IG-~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~~~l~~~~~~viTPN~~E~~~L~g~~~ 184 (310)
T 2r3b_A 107 NVVEQADVILIG-PGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSAITLFSQGNFSLTYPEKVVFTPHQMEWQRLSHLPI 184 (310)
T ss_dssp HHHHHCSEEEEC-TTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHHHHHHHHTTCCCSSGGGEEEECCHHHHHHHHCCCG
T ss_pred HHhccCCEEEEe-CCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCcchhcccchhhhcCCCCEEEcCCHHHHHHHhCCCC
Confidence 455678899984 2121223 34445554443 24 7776 22221 122 2 3 999999999998632
Q ss_pred CCcc-CH-HHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHH-Hc
Q psy6977 135 FQTE-DL-HAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQL-IK 211 (239)
Q Consensus 135 ~~~~-~~-~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l-~~ 211 (239)
.+.+ +. .++++.+ |+ +|+..| .+.++++++.. ++..+.. +..+|.|+||++ +|+++++ .+
T Consensus 185 ~~~~~~~a~~aA~~l---------g~--~VvlKG-~~~vi~~~~~~-~~~~~g~---~~~~t~GtGD~L-ag~Iaa~lA~ 247 (310)
T 2r3b_A 185 EQQTLANNQRQQAKL---------GS--TIVLKS-HRTTIFHAGEP-FQNTGGN---PGMATGGTGDTL-AGIIAGFLAQ 247 (310)
T ss_dssp GGCCHHHHHHHHHHH---------TS--EEEECS-TTCEEECSSSC-EECCCCC---GGGCSTTHHHHH-HHHHHHHHHH
T ss_pred CcccchHHHHHHHHh---------Cc--EEEEeC-CceEEEECCEE-EEECCCC---CCCCCCChHHHH-HHHHHHHHHc
Confidence 2221 23 4444443 22 445456 44555554434 3444554 677899999997 5555555 69
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy6977 212 GEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 212 g~~~~~a~~~a~~~a~~~~ 230 (239)
|.++.+|+.+|+.+.+...
T Consensus 248 g~~~~eA~~~A~~~~~~ag 266 (310)
T 2r3b_A 248 FKPTIETIAGAVYLHSLIG 266 (310)
T ss_dssp SCSSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999999977665543
|
| >3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.39 E-value=5.7e-07 Score=72.76 Aligned_cols=143 Identities=13% Similarity=0.077 Sum_probs=82.1
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---hhHHH---H-hh---HH-hcCHHHHHHHHHHcC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---NYLHH---R-FI---YL-VLIDFEALAFAKQQN 134 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p~~~~---~-~~---~~-~~n~~E~~~l~~~~~ 134 (239)
..++..+.+.++ ..+..+. +.+.++++.++ .+ ++|+ ..+.. + ++ .+ +||..|++.|++...
T Consensus 121 ~~~~~~dav~IG-~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~~l~L~~~~~viTPN~~E~~~L~g~~~ 198 (311)
T 3bgk_A 121 EQITAADVVLMG-PGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSAINLLAKRKPAIWPTKQIILTPHQKEWERLSGLTI 198 (311)
T ss_dssp HHHHHCSEEEEC-TTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHHHHHHHHCC-CCCSCSCEEEECCSCC-CTTTCCCS
T ss_pred HHhccCCEEEEc-CCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCChhhhhccChhhcCCCCCEEECCcHHHHHHHhCCCC
Confidence 455678899984 2112233 34444554443 24 7777 22221 1 32 23 999999999987632
Q ss_pred CCccCHHHH-HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHH-Hc-
Q psy6977 135 FQTEDLHAI-ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQL-IK- 211 (239)
Q Consensus 135 ~~~~~~~~~-~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l-~~- 211 (239)
.+.+ ++. .+...++. .| .+|+..| .+.++++++.. ++..+.. +..++.|+||+| +|+++++ .+
T Consensus 199 ~~~~--~d~~~~aa~~l~----~g--~~VvlkG-~~~~i~~~~~~-~~~~~~~---~~~~t~GtGD~L-ag~iaa~lA~~ 264 (311)
T 3bgk_A 199 PEQI--EAATQTALAHFP----KE--TILVAKS-HQTKIYQGQKI-GHIQVGG---PYQATGGMGDTL-AGMIAGFVAQF 264 (311)
T ss_dssp TTCC--HHHHHHHHTTSC----TT--CEEEECS-SSCEEEETTEE-EEECCCC---GGGCSTTHHHHH-HHHHHHHHHHC
T ss_pred Ccch--hhHHHHHHHHHh----cC--CEEEEeC-CCeEEEECCEE-EEECCCC---CCCCCCcHHHHH-HHHHHHHHHcc
Confidence 2111 222 22233331 13 3455455 45556664434 4455555 678899999997 6666665 68
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy6977 212 GEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 212 g~~~~~a~~~a~~~a~~~~ 230 (239)
|.++.+|+++|+.+.+...
T Consensus 265 g~~~~eA~~~A~~~~~~ag 283 (311)
T 3bgk_A 265 HTDRFEVAAAAVFLHSYIA 283 (311)
T ss_dssp CSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999999977665543
|
| >3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-06 Score=69.87 Aligned_cols=139 Identities=13% Similarity=0.130 Sum_probs=86.4
Q ss_pred hcccceeEEEEeccccccCh-HHHHHHHHHhhhCC---CCChhhHH-HHh-----hHH-hcCHHHHHHHHHHcCCC-ccC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP-ESILEVAKVALSCT---IRNINYLH-HRF-----IYL-VLIDFEALAFAKQQNFQ-TED 139 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~g---~~~~p~~~-~~~-----~~~-~~n~~E~~~l~~~~~~~-~~~ 139 (239)
+.+++++++++. +-+.. +...++++.+.+.+ ++|...+. +.+ +.+ +||..|++.|++....+ .++
T Consensus 94 ~~l~~~davviG---PGlg~~~~~~~~~~~~l~~~~p~VlDAdal~~~~l~~~~~~~vlTPN~~E~~~L~g~~~~~~~~d 170 (279)
T 3rpz_A 94 QLEETYRAIAIG---PGLPQTESVQQAVDHVLTADCPVILDAGALAKRTYPKREGPVILTPHPGEFFRMTGVPVNELQKK 170 (279)
T ss_dssp CCSSCCSEEEEC---TTCCCCHHHHHHHHHHTTSSSCEEECGGGCCSCCCCCCSSCEEECCCHHHHHHHHCCCHHHHTTS
T ss_pred hhccCCCEEEEC---CCCCCCHHHHHHHHHHHhhCCCEEEECCccchhhhhhccCCEEEecCHHHHHHHhCCCccchHHH
Confidence 456789999994 33322 34456666665555 56651110 222 123 89999999999853211 246
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHH
Q psy6977 140 LHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219 (239)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~ 219 (239)
..++++.+.++. + .+|+-.|.. .+++++++.+++..+.. +...|.|+||.+.+.+...+.+|.++.+|+
T Consensus 171 ~~~aa~~la~~~-----~--~~VvlKG~~-~vi~~~~g~~~~~~~g~---~~~at~GtGD~Lag~iaa~lA~g~~~~~A~ 239 (279)
T 3rpz_A 171 RAEYAKEWAAQL-----Q--TVIVLKGNQ-TVIAFPDGDCWLNPTGN---GALAKGGTGDTLTGMILGMLCCHEDPKHAV 239 (279)
T ss_dssp HHHHHHHHHHHH-----T--SEEEECSTT-CEEECTTSCEEECCCCC---GGGCSTTHHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHc-----C--eEEEEeCCC-cEEECCCceEEEeCCCC---CCCCCCChHHHHHHHHHHHHHCCCCHHHHH
Confidence 667777777641 3 244445554 44555554444544444 677899999987555555567999999999
Q ss_pred HHHHH
Q psy6977 220 ECGVW 224 (239)
Q Consensus 220 ~~a~~ 224 (239)
..|+.
T Consensus 240 ~~a~~ 244 (279)
T 3rpz_A 240 LNAVY 244 (279)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
|
| >3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=3.4e-06 Score=72.53 Aligned_cols=142 Identities=12% Similarity=0.110 Sum_probs=89.0
Q ss_pred hcccceeEEEEeccccccC-hHHHHHHHH-HhhhCC---CCCh---hhH-HHHhh-----HH-hcCHHHHHHHHHHcCCC
Q psy6977 72 KLIQNAEYYYVSGFFLTVS-PESILEVAK-VALSCT---IRNI---NYL-HHRFI-----YL-VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~-~~~~~~~~~-~~~~~g---~~~~---p~~-~~~~~-----~~-~~n~~E~~~l~~~~~~~ 136 (239)
+.++.++++++. +-+. .+....+++ .+++.+ ++|. ..+ .++++ .+ +||..|++.|+|....+
T Consensus 316 ~~~~~~davviG---pGlg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~~~ll~~~~~~~vlTPN~~E~~~L~g~~~~~ 392 (502)
T 3rss_A 316 ELSKDVDVVAIG---PGLGNNEHVREFVNEFLKTLEKPAVIDADAINVLDTSVLKERKSPAVLTPHPGEMARLVKKTVGD 392 (502)
T ss_dssp HHHTTCSEEEEC---TTCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCCHHHHHHCSSCEEECCCHHHHHHHHTCCHHH
T ss_pred HHhccCCEEEEe---CCCCCCHHHHHHHHHHHHhcCCCEEEeCcccchhcHHHHhccCCCEEEeCCHHHHHHHhCCCccc
Confidence 566789999994 3222 223334443 344445 7777 111 23443 22 89999999999852111
Q ss_pred -ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCH
Q psy6977 137 -TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215 (239)
Q Consensus 137 -~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~ 215 (239)
.++ .+.++.+.++. + .+|+..|.. .++++++..+. ..... +..+|+|+||+|.|.+...+.+|.++
T Consensus 393 ~~~d-~~aa~~la~~~-----~--~~VvlKG~~-~vi~~~~~~~~-~~~g~---~~~at~GsGD~Lag~iaa~lA~g~~~ 459 (502)
T 3rss_A 393 VKYN-YELAEEFAKEN-----D--CVLVLKSAT-TIVTDGEKTLF-NITGN---TGLSKGGSGDVLTGMIAGFIAQGLSP 459 (502)
T ss_dssp HTTC-HHHHHHHHHHH-----T--SEEEECSSS-EEEECSSCEEE-ECCCC---GGGSSTTHHHHHHHHHHHHHHTTCCH
T ss_pred hHHH-HHHHHHHHHHc-----C--CEEEEeCCC-eEEEcCCEEEE-ECCCC---CccccCCchHHHHHHHHHHHhCCCCH
Confidence 234 66777777641 3 355556654 45555554443 33343 67789999998877777777899999
Q ss_pred HHHHHHHHHHHHHH
Q psy6977 216 SVCIECGVWAAQHI 229 (239)
Q Consensus 216 ~~a~~~a~~~a~~~ 229 (239)
.+|+.+|+..-..+
T Consensus 460 ~~Aa~~A~~~hg~A 473 (502)
T 3rss_A 460 LEASTVSVYLHGFA 473 (502)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999987665544
|
| >3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=98.29 E-value=1e-05 Score=64.01 Aligned_cols=145 Identities=13% Similarity=0.050 Sum_probs=92.6
Q ss_pred hhhhcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh------hhH----HHHhh---HH-hcCHHHHHH
Q psy6977 69 ENNKLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI------NYL----HHRFI---YL-VLIDFEALA 128 (239)
Q Consensus 69 ~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~------p~~----~~~~~---~~-~~n~~E~~~ 128 (239)
+..+..+.++.+++.-- ..+. +.+..+++.+++.+ ++|+ ... .+++. .+ .||..|++.
T Consensus 51 e~~e~~~~a~alvIn~G--~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 51 EFPQMFQQTSALVLNLG--HLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRT 128 (273)
T ss_dssp GHHHHHTTCSEEEEECC--SCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHH
T ss_pred HHHHHHHHCCeEEEecC--CCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHH
Confidence 34477788999999521 1333 34555556666666 6665 111 13331 12 899999999
Q ss_pred HHHHcCC----Cc-------c---CHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccC
Q psy6977 129 FAKQQNF----QT-------E---DLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDT 194 (239)
Q Consensus 129 l~~~~~~----~~-------~---~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt 194 (239)
|+|.... +. + +..++++.+.++. +...|++| |... ++++++..+.++.... ....+
T Consensus 129 L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~-----~~~~Vvlk-G~~D-~i~dg~~~~~~~~G~~---~~~~v 198 (273)
T 3dzv_A 129 FCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKF-----PQTVFLAT-GIQD-VLVSQEQVIVLQNGVP---ELDCF 198 (273)
T ss_dssp HTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHS-----TTCEEEEE-SSSE-EEECSSCEEEECCCCG---GGGSS
T ss_pred HhCCcccccccccccccchhhhhHHHHHHHHHHHHHh-----CCeEEEEE-CCee-EEEcCCEEEEeCCCCc---ccCCc
Confidence 9986321 11 1 4456677777752 32466666 4443 4445666666655432 45567
Q ss_pred CCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 195 NGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 195 ~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
+|.||++.|.+.+.+.+|.++.+|+..|...
T Consensus 199 ~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~ 229 (273)
T 3dzv_A 199 TGTGDLVGALVAALLGEGNAPMTAAVAAVSY 229 (273)
T ss_dssp TTHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999999999999999998877653
|
| >3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0064 Score=47.68 Aligned_cols=139 Identities=9% Similarity=-0.022 Sum_probs=79.1
Q ss_pred hcccceeEEEEeccccccChHHH---HHHHHHhhhCC---CCCh------hhHH----HHhhH---H-hcCHHHHHHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTVSPESI---LEVAKVALSCT---IRNI------NYLH----HRFIY---L-VLIDFEALAFAK 131 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~g---~~~~------p~~~----~~~~~---~-~~n~~E~~~l~~ 131 (239)
+..+.++.++++- ..++++.. ....+.+.+.+ ++|+ ++.. +++.. + .+|..|+..|.|
T Consensus 52 e~~~~a~al~iNi--Gtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L~g 129 (265)
T 3hpd_A 52 EMIRLADAVVINI--GTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLG 129 (265)
T ss_dssp HHHHHCSEEEEEC--TTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHH
T ss_pred HHHHHCCeEEEEC--CCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHHhc
Confidence 6677888888852 22444443 34445555556 6676 2222 44432 2 899999999998
Q ss_pred HcCC---------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhh
Q psy6977 132 QQNF---------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFV 202 (239)
Q Consensus 132 ~~~~---------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ 202 (239)
.... ..++..++++.+.++. | .+|+-.|+.. ++.+++..+.++.-.. .....+|.||.+.
T Consensus 130 ~~~~~~gvds~~~~~~d~~~~a~~lA~~~-----~--~vVvlkG~~d-~I~dg~~~~~~~~G~~---~m~~vtGtGc~Ls 198 (265)
T 3hpd_A 130 EEGKTRGVDSLEYGEEEAKKLTMNAAREF-----N--TTVAVTGAVD-YVSDGRRTFAVYNGHE---LLGRVTGTGCMVA 198 (265)
T ss_dssp HHC----------CHHHHHHHHHHHHHHT-----T--SEEEEESSSE-EEECSSCEEEECCCCG---GGGGSTTHHHHHH
T ss_pred ccCCCCCccCccccHHHHHHHHHHHHHHh-----C--CEEEEeCCCe-EEEcCCEEEEECCCCh---HhhcCCccchHHH
Confidence 6421 2234566777777752 3 3444446554 3445555655544331 2333489999876
Q ss_pred HHHHHHHHcCCCHHHHHHHHHH
Q psy6977 203 GGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 203 ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+...+..+ +..+|...|+.
T Consensus 199 g~iaa~lA~~-~~~~Aa~~a~~ 219 (265)
T 3hpd_A 199 ALTGAFVAVT-EPLKATTSALV 219 (265)
T ss_dssp HHHHHHHTTS-CHHHHHHHHHH
T ss_pred HHHHHHHhcC-ChHHHHHHHHH
Confidence 5555555555 55555554443
|
| >3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.013 Score=50.78 Aligned_cols=145 Identities=12% Similarity=0.063 Sum_probs=88.6
Q ss_pred hhhhcccc-eeEEEEeccccccChHHHHHHHHHhhhCC---CCCh------hhH----HHHhhH----H-hcCHHHHHHH
Q psy6977 69 ENNKLIQN-AEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI------NYL----HHRFIY----L-VLIDFEALAF 129 (239)
Q Consensus 69 ~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~------p~~----~~~~~~----~-~~n~~E~~~l 129 (239)
+..+..+. ++.+++.--.+ .+.+.+..+++.+++.+ ++|+ ... .++++. + .+|..|++.|
T Consensus 298 E~~e~~~~~~~alvin~G~l-~~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L 376 (540)
T 3nl6_A 298 EVNDLAAIPHATLLLNTGSV-APPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGL 376 (540)
T ss_dssp HHHHHTTSTTCEEEEESSCS-CCHHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHH
T ss_pred HHHHHHhccCCeEEEeCCCC-CHHHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHH
Confidence 34466777 89999852222 22566777777777776 6666 111 245542 2 8999999999
Q ss_pred HHHcC-----C------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-------------------CeEE
Q psy6977 130 AKQQN-----F------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQN-------------------GKTT 179 (239)
Q Consensus 130 ~~~~~-----~------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-------------------~~~~ 179 (239)
+|... . +.++..++++.+.++. + ..|++ .|....+. ++ +..+
T Consensus 377 ~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~-----~-~vVvl-kG~~D~I~-dg~~~~~~~~~~~~~~~~~~~~~~~ 448 (540)
T 3nl6_A 377 AELNKERMKGVDASSGISNELLIQATKIVAFKY-----K-TVAVC-TGEFDFIA-DGTIEGKYSLSKGTNGTSVEDIPCV 448 (540)
T ss_dssp TTC--------------CCHHHHHHHHHHHHHT-----T-SEEEE-CSSSEEEE-ECCGGGBCCSSSCCSSCCTTSSCEE
T ss_pred hCCCcccccccccccccCHHHHHHHHHHHHHHh-----C-CEEEE-cCCCeEEE-CCCccccccccccccccccCCccEE
Confidence 88531 0 1244566777777752 3 34444 46555443 44 3455
Q ss_pred EEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC---CHHHHHHHHHH
Q psy6977 180 EFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE---PLSVCIECGVW 224 (239)
Q Consensus 180 ~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~---~~~~a~~~a~~ 224 (239)
.++.-.++ -...++|.||++.+.+...+..+. ++.+|+..|+.
T Consensus 449 ~~~~G~~~--~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~ 494 (540)
T 3nl6_A 449 AVEAGPIE--IMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVM 494 (540)
T ss_dssp EEECSCCG--GGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHH
T ss_pred EECCCChh--hccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHH
Confidence 55543311 344469999999998888888877 57777766654
|
| >3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.014 Score=49.68 Aligned_cols=136 Identities=13% Similarity=0.074 Sum_probs=79.6
Q ss_pred ccceeEEEEecccccc-ChHHHHHHHHHhhhCC-CCCh-----hhHHHHhhH--H-hcCHHHHHHHHHH-----cCCC-c
Q psy6977 74 IQNAEYYYVSGFFLTV-SPESILEVAKVALSCT-IRNI-----NYLHHRFIY--L-VLIDFEALAFAKQ-----QNFQ-T 137 (239)
Q Consensus 74 ~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~g-~~~~-----p~~~~~~~~--~-~~n~~E~~~l~~~-----~~~~-~ 137 (239)
.++++.+++.. -+.. +.+ +..+++. . . ++|. +.+.+.++. + .||.-|++.|++. ...+ .
T Consensus 290 ~~~~~a~~iGP-GlG~~~~~-l~~~l~~--~-p~VlDADaL~~~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~~~~ 364 (475)
T 3k5w_A 290 PNLLSAFALGM-GLENIPKD-FNRWLEL--A-PCVLDAGVFYHKEILQALEKEAVLTPHPKEFLSLLNLVGINISMLELL 364 (475)
T ss_dssp CSSCSEEEECT-TCSSCCTT-HHHHHHH--S-CEEEEGGGGGSGGGGTTTTSSEEEECCHHHHHHHHHHTSCCCCTTSGG
T ss_pred ccCCCEEEEcC-CCCCCHHH-HHHHHhc--C-CEEEECcccCCchhhhccCCCEEECCCHHHHHHHhCCccCCCCcchhH
Confidence 36788888842 2222 223 4445432 2 5 4444 222222222 2 8999999999997 2211 2
Q ss_pred cCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHH
Q psy6977 138 EDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSV 217 (239)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~ 217 (239)
++..+.++.+.++. |...|++| |..-.+ .+++..+..+ ... .-..|.|.||.+.+.+...+.+|.++.+
T Consensus 365 ~d~~~aa~~la~~~-----g~~~VvlK-G~~~vI-~~~~~~~~~~-~g~---~~mat~GtGdvLsg~Iaa~lA~g~~~~~ 433 (475)
T 3k5w_A 365 DNKLEIARDFSQKY-----PKVVLLLK-GANTLI-AHQGQVFINI-LGS---VALAKAGSGDVLAGLILSLLSQNYTPLD 433 (475)
T ss_dssp GSCC--CHHHHHHC-----TTEEEEEC-SSSEEE-EETTEEEEEC-CCC---GGGCSTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHHc-----CCeEEEEe-CCCCEE-ECCCEEEEEC-CCC---CCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 34456667777641 23445554 554443 3455444333 222 4556799999999999999999999999
Q ss_pred HHHHHHHH
Q psy6977 218 CIECGVWA 225 (239)
Q Consensus 218 a~~~a~~~ 225 (239)
|+..|+..
T Consensus 434 Aa~~a~~l 441 (475)
T 3k5w_A 434 AAINASLA 441 (475)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88876543
|
| >3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.15 Score=43.12 Aligned_cols=31 Identities=32% Similarity=0.492 Sum_probs=22.8
Q ss_pred EEEEeccCCCCCCcccCCCCchhhhHH-HHHHHH
Q psy6977 178 TTEFPVQRLPAESVVDTNGAGDSFVGG-FLSQLI 210 (239)
Q Consensus 178 ~~~~~~~~~~~~~vvdt~GaGDaf~ag-~~~~l~ 210 (239)
...+|..-+ ++.+.|+|-||+|+|| |++.+.
T Consensus 436 v~~iPt~~v--~~P~~TVGLGDtiSagaF~~~l~ 467 (474)
T 3drw_A 436 VVVIPTRLV--QNPVLTVGLGDTISAGAFLTYLE 467 (474)
T ss_dssp EEEEECCCC--SSCSCCTTHHHHHHHHHHHHHHH
T ss_pred EEEEehhhh--cCCCccccCCchhhHHHHHHHHH
Confidence 334555544 4788999999999998 777663
|
| >1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=80.17 E-value=1.5 Score=36.97 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=16.0
Q ss_pred EEEEeccCCCCCCcccCCCCchhh-hHHHHHHHH
Q psy6977 178 TTEFPVQRLPAESVVDTNGAGDSF-VGGFLSQLI 210 (239)
Q Consensus 178 ~~~~~~~~~~~~~vvdt~GaGDaf-~ag~~~~l~ 210 (239)
...+|..-+ ++.+.|+|.||+| ++||++.+.
T Consensus 424 i~~~P~lv~--~~P~~TVGLGDtISa~gfv~~l~ 455 (457)
T 1l2l_A 424 LTFIPTKVV--KKPKSTVGIGDTISSSAFVSEFS 455 (457)
T ss_dssp EEEEECC-----------CTTHHHHHHHHHHHHH
T ss_pred EEEEehhhc--CCCCceecCCcchhhHHHHHHHh
Confidence 334444444 4888999999999 668998875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 239 | ||||
| d1bx4a_ | 342 | c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien | 6e-28 | |
| d2absa1 | 350 | c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g | 1e-19 | |
| d2afba1 | 333 | c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase | 7e-16 | |
| d1vk4a_ | 288 | c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot | 8e-14 | |
| d2abqa1 | 306 | c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru | 3e-13 | |
| d2f02a1 | 313 | c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac | 4e-12 | |
| d1v19a_ | 302 | c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther | 5e-12 | |
| d2ajra1 | 319 | c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T | 2e-11 | |
| d1rkda_ | 306 | c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: | 3e-11 | |
| d2dcna1 | 308 | c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 | 4e-10 | |
| d1vm7a_ | 299 | c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax | 2e-09 | |
| d2fv7a1 | 308 | c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien | 4e-09 | |
| d1tyya_ | 304 | c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm | 5e-06 | |
| d1vi9a_ | 288 | c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col | 6e-04 | |
| d1lhpa_ | 309 | c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) | 0.003 |
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (265), Expect = 6e-28
Identities = 97/253 (38%), Positives = 136/253 (53%), Gaps = 17/253 (6%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G +G D + +IL+ KA+E + Y + +PTGTCA IT + ++ AA
Sbjct: 84 FGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIAN-LAAANCYK 142
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFI--- 117
HL + +N L++ A Y++GFFLTVSPES+L+VA A L FI
Sbjct: 143 KEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQF 202
Query: 118 -------------YLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT 164
L + EA FA++Q F+T+D+ IA K LPK N R+RI I T
Sbjct: 203 YKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFT 262
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
QG I++ + T F V + ++DTNGAGD+FVGGFLSQL+ +PL+ CI G +
Sbjct: 263 QGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHY 322
Query: 225 AAQHIIQVSGCTL 237
AA II+ +GCT
Sbjct: 323 AASIIIRRTGCTF 335
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Score = 84.5 bits (207), Expect = 1e-19
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 108 NINYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLP-------------KQN 154
+ L L + E AK N + A++ QN
Sbjct: 200 AMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQN 259
Query: 155 PNRERITIITQGDKPIILSQNGKT-----TEFPVQRLPAESVVDTNGAGDSFVGGFLSQL 209
+ ++ ++T+G P+I ++ E V + AE +VDTNGAGD+FVGGFL L
Sbjct: 260 TSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYAL 319
Query: 210 IKGEPLSVCIECGVWAAQHIIQVSGCTL 237
+G+ + CI CG AQ +IQ G +L
Sbjct: 320 SQGKTVKQCIMCGNACAQDVIQHVGFSL 347
|
| >d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermotoga maritima, TM0067 [TaxId: 2336]
Score = 73.2 bits (178), Expect = 7e-16
Identities = 34/270 (12%), Positives = 71/270 (26%), Gaps = 38/270 (14%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
+ + + D +FG+ Y G + I + + +V + A + +
Sbjct: 55 VTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAIS 114
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNI----------- 109
K++ A +++ SG + E L + + +
Sbjct: 115 EAKREDFD-WEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRAR 173
Query: 110 -----------------------NYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALK 146
N + + ++ L K + +
Sbjct: 174 LWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTR 233
Query: 147 ISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL 206
N T +++ +NG+ +VD GAGDSF G +
Sbjct: 234 KYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNR---YEIHIVDRVGAGDSFAGALI 290
Query: 207 SQLIKGEPLSVCIECGVWAAQHIIQVSGCT 236
+ G E A+ + G
Sbjct: 291 YGSLMGFDSQKKAEFAAAASCLKHTIPGDF 320
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Score = 66.9 bits (162), Expect = 8e-14
Identities = 25/240 (10%), Positives = 60/240 (25%), Gaps = 19/240 (7%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
+ +++ S + + V+ + T + + R AA
Sbjct: 51 ITKCTREDVSKFSFLRDNG----VEVVFLKSPRTTSIENRYGSDPDTRESFLISAADPFT 106
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAK-----VALSCTIRNINYLHHR 115
D + E +++ + PE ++ V + ++ + +
Sbjct: 107 ESDLAFI--------EGEAVHINPLWYGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEK 158
Query: 116 FIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQN 175
+Y E L +N +++ R
Sbjct: 159 LVYRDWEMKEKYLKYLDLFKVDSREA-ETLTGTNDLRESCRIIRSFGAKIILATHASGVI 217
Query: 176 GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLI-KGEPLSVCIECGVWAAQHIIQVSG 234
F + S+ G GD+ FL + K + + ++ G
Sbjct: 218 VFDGNFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPG 277
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Score = 65.5 bits (158), Expect = 3e-13
Identities = 32/235 (13%), Positives = 64/235 (27%), Gaps = 7/235 (2%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
+G +G + + + E + + N A +
Sbjct: 56 LGFLGGFTGAYVRNALEKE------EIGLSFIEVEGDTRINVKIKGKQETELNGTAPLIK 109
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILE-VAKVALSCTIRNINYLHHRFIYL 119
+ E ++ + ++G P++I + ++A ++
Sbjct: 110 KEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEALHE 169
Query: 120 VLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTT 179
VL + IA +P +
Sbjct: 170 VLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAE 229
Query: 180 EFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSG 234
+P+ V ++ GAGDS V GFL+ L +G+ L + V A G
Sbjct: 230 GMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSATAFSDG 284
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Score = 62.4 bits (150), Expect = 4e-12
Identities = 33/245 (13%), Positives = 68/245 (27%), Gaps = 15/245 (6%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G +G + + I + T ++ + + L A +
Sbjct: 56 TGVLGGFHGAFIANELKKANIPQAFTSIKE--ETRDSIAILHEGNQTEILEAGPTVSPEE 113
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVA--------KVALSCTIRNINYL 112
+ L + I+ AE +SG P + L T +
Sbjct: 114 ISNFLENFDQL--IKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDSLRQ 171
Query: 113 HHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIIL 172
+ + + L + Q + +A + L K +I+ G I
Sbjct: 172 VLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVISLGKDGAIA 231
Query: 173 SQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232
+ + + + G+GD+ + G L K P + ++ G+ A Q
Sbjct: 232 KHHDQFYRVKIP---TIQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAGMANAQE 288
Query: 233 SGCTL 237
Sbjct: 289 RMTGH 293
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Score = 62.1 bits (149), Expect = 5e-12
Identities = 40/242 (16%), Positives = 70/242 (28%), Gaps = 6/242 (2%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
+G VG+D ++E + G+ + + TG G+ R +A
Sbjct: 53 VGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSA 112
Query: 61 TPDHLHVP---ENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFI 117
P E + + + +E AK ++NY +
Sbjct: 113 LAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWS 172
Query: 118 YLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGK 177
F A + A L ++ +G K +G+
Sbjct: 173 PEEARGFLERALPGVDLLFLSEEEAELLFGRVEEALRALSAPEVVLKRGAKGAWAFVDGR 232
Query: 178 TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSGCTL 237
E A VD GAGD+F G+L+ + G P+ + + G
Sbjct: 233 RVEGSA---FAVEAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHE 289
Query: 238 GL 239
G
Sbjct: 290 GA 291
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Score = 60.4 bits (145), Expect = 2e-11
Identities = 31/246 (12%), Positives = 67/246 (27%), Gaps = 13/246 (5%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
G VG ++E L+ + T +I + K + + N ++
Sbjct: 59 TGFVGGYMGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAI-NFPGPDVT 117
Query: 61 TPDHLHV-PENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFIYL 119
D H + + +SG E I + +
Sbjct: 118 DMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRLLE 177
Query: 120 VLIDFEALAFAKQQNFQTE-------DLHAIALKISNLPKQNPNRERITIITQGDKPIIL 172
+ + + + + DL + K + + + I+
Sbjct: 178 RIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEKSQVSVVSYEVKNDIVA 237
Query: 173 SQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIK-GEPLSVCIECGVWAAQHIIQ 231
++ G + + GAGD++V G + IK G + G +A +
Sbjct: 238 TREGVWLIRSKEEID---TSHLLGAGDAYVAGMVYYFIKHGANFLEMAKFGFASALAATR 294
Query: 232 VSGCTL 237
+
Sbjct: 295 RKEKYM 300
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Score = 59.8 bits (143), Expect = 3e-11
Identities = 46/244 (18%), Positives = 76/244 (31%), Gaps = 14/244 (5%)
Query: 1 MGAVG-KDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANL 59
+ G + + A++ + E TG + + G+ + A A L
Sbjct: 58 IACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAAL 117
Query: 60 FTPDHLHVPENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCTIRNINYLHHRFIYL 119
E S ++ I K ++ L + L
Sbjct: 118 SPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLAL 177
Query: 120 VLIDF----EALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQN 175
V I EA + ED A + R +IT G + + S N
Sbjct: 178 VDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGI------RTVLITLGSRGVWASVN 231
Query: 176 GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSGC 235
G+ P R+ VDT AGD+F G ++ L++ +PL I AA + G
Sbjct: 232 GEGQRVPGFRVQ---AVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGA 288
Query: 236 TLGL 239
+
Sbjct: 289 QPSV 292
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Score = 56.4 bits (134), Expect = 4e-10
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 191 VVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSGCTLGL 239
V D GAGD+ G FLS KG + ++ + A+ + + G L
Sbjct: 247 VEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGDQENL 295
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Score = 54.3 bits (129), Expect = 2e-09
Identities = 29/214 (13%), Positives = 64/214 (29%), Gaps = 10/214 (4%)
Query: 26 YQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYYYVSGF 85
+ PTG + + G+ ++ A + + + + ++ +
Sbjct: 83 GYIRVSLPTGRAFIEVDKTGQ-NRIIIFPGANAELKKELI----DWNTLSESDILLLQNE 137
Query: 86 FLTVSPESILEVAKVALSCTIRNINYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIAL 145
+ + + ++ +D+ + + +
Sbjct: 138 IPFETTLECAKRFNGIVIFDPAPAQGINEEIFQY--LDYLTPNEKEIEALSKDFFGEFLT 195
Query: 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205
K + I+ GDK ++L + FP ++ VDT AGD F G F
Sbjct: 196 VEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVK---AVDTTAAGDVFNGAF 252
Query: 206 LSQLIKGEPLSVCIECGVWAAQHIIQVSGCTLGL 239
L +G+ + G AA + G +
Sbjct: 253 AVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSI 286
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (126), Expect = 4e-09
Identities = 35/221 (15%), Positives = 69/221 (31%), Gaps = 14/221 (6%)
Query: 26 YQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYYYVSGF 85
TGT ++++ + G+ N+ L+ + V
Sbjct: 84 TYQTKDAATGTASIIVNNEGQ------NIIVIVAGANLLLNTEDLRAAANVISRAKVMVC 137
Query: 86 FLTVSPESILEVAKVALSCTIRNINYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIAL 145
L ++P + LE +A ++ + L + + E L + +
Sbjct: 138 QLEITPATSLEALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTV 197
Query: 146 KISNLPKQNPNRE-----RITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200
+ + ++ IIT G + ++ + + + VDT GAGDS
Sbjct: 198 GSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK-AVDTTGAGDS 256
Query: 201 FVGGFLSQL--IKGEPLSVCIECGVWAAQHIIQVSGCTLGL 239
FVG L L + + A +Q +G
Sbjct: 257 FVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGTQSSY 297
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Score = 44.0 bits (102), Expect = 5e-06
Identities = 47/252 (18%), Positives = 76/252 (30%), Gaps = 17/252 (6%)
Query: 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLF 60
+G +G D+ L + G+ V + D + T ++ RS +
Sbjct: 46 IGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADT 105
Query: 61 TPDHLHVPENNKLIQNAEYYYVSGFFLTVSP--ESILEVAKVALSCTIRNINYLHHRFIY 118
+P + E++Y S LT P E+ LE A+ + ++ R
Sbjct: 106 YVSPQDLPP----FRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKM 161
Query: 119 LVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKT 178
D A+ + + + R + G I+S
Sbjct: 162 WGNTDEIPELIARSAALASICKVSADELCQLSGASHWQDARYYLRDLGCDTTIISLGADG 221
Query: 179 T------EFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG-----EPLSVCIECGVWAAQ 227
P VVDT GAGD+FVGG L L + L+ I
Sbjct: 222 ALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNANACGA 281
Query: 228 HIIQVSGCTLGL 239
+ G L
Sbjct: 282 MAVTAKGAMTAL 293
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Score = 37.8 bits (87), Expect = 6e-04
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 165 QGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224
+ ++L + + + G GD G L +L++G L +E
Sbjct: 191 RDRFEMLLVTADEAWHISRPLVDFG-MRQPVGVGDVTSGLLLVKLLQGATLQEALEHVTA 249
Query: 225 AAQHIIQVS 233
A I+ +
Sbjct: 250 AVYEIMVTT 258
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Score = 35.9 bits (82), Expect = 0.003
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 5/131 (3%)
Query: 104 CTIRNINYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163
I N + I + A + + + SNL + + +
Sbjct: 141 ADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDYLMALG 200
Query: 164 TQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG-EPLSVCIECG 222
+Q + S + + ++ G GD F L+ K L V E
Sbjct: 201 SQRTRAPDGSVVTQRIRMEMHKVD----AVFVGTGDLFAAMLLAWTHKHPNNLKVACEKT 256
Query: 223 VWAAQHIIQVS 233
V A H++Q +
Sbjct: 257 VSAMHHVLQRT 267
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| d1bx4a_ | 342 | Adenosine kinase {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d2absa1 | 350 | Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | 100.0 | |
| d2f02a1 | 313 | Tagatose-6-phosphate kinase LacC {Enterococcus fae | 100.0 | |
| d2abqa1 | 306 | Fructose 1-phosphate kinase FruB {Bacillus halodur | 99.97 | |
| d1vm7a_ | 299 | Ribokinase {Thermotoga maritima [TaxId: 2336]} | 99.97 | |
| d2dcna1 | 308 | Hypothetical fructokinase ST2478 {Sulfolobus tokod | 99.97 | |
| d1v19a_ | 302 | 2-keto-3-deoxygluconate kinase {Thermus thermophil | 99.97 | |
| d2afba1 | 333 | 2-keto-3-deoxygluconate kinase {Thermotoga maritim | 99.97 | |
| d2ajra1 | 319 | Putative sugar kinase TM0828 {Thermotoga maritima | 99.97 | |
| d1rkda_ | 306 | Ribokinase {Escherichia coli [TaxId: 562]} | 99.96 | |
| d1tyya_ | 304 | Aminoimidazole riboside kinase {Salmonella typhimu | 99.96 | |
| d2fv7a1 | 308 | Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d1vk4a_ | 288 | Hypothetical protein TM0415 {Thermotoga maritima [ | 99.91 | |
| d1vi9a_ | 288 | Pyridoxamine kinase {Escherichia coli [TaxId: 562] | 99.61 | |
| d1ub0a_ | 258 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.39 | |
| d1lhpa_ | 309 | Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] | 99.2 | |
| d1jxha_ | 266 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.15 | |
| d1ekqa_ | 269 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba | 97.95 | |
| d1v8aa_ | 264 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar | 97.54 | |
| d2ax3a1 | 278 | Hypothetical protein TM0922, C-terminal domain {Th | 97.51 | |
| d1kyha_ | 275 | Hypothetical protein YxkO {Bacillus subtilis [TaxI | 97.43 |
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-36 Score=248.25 Aligned_cols=237 Identities=40% Similarity=0.660 Sum_probs=190.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+++++.|+++||+++++.+.+.+|+.+++++.. ++++.+....+.......++.........+..++++
T Consensus 84 ig~vG~D~~G~~i~~~l~~~GVd~~~i~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (342)
T d1bx4a_ 84 FGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITG-DNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVC 162 (342)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEET-TEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSEE
T ss_pred EeecCCChhhhhhhhhhhhhcccceeeeeecccceEEEEEecC-CccceeeeccccccccchhhhhhhhhHHHHhhcccc
Confidence 4789999999999999999999999999887788888877775 566666666665555554444433444677899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
+++++......+....+++.+++.+ +++. +.. .++++++ ++|++|+..|++.......+.+++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ne~Ea~~l~~~~~~~~~~~~~~~ 242 (342)
T d1bx4a_ 163 YIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIA 242 (342)
T ss_dssp EEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHH
T ss_pred eecccccchhHHHHHHHHHHhhhccceeecccccccchhccccchhhhhccccEEeecHHHHHHhhCcCCcccchhhhhH
Confidence 9998877777788888888888877 3333 221 1455554 9999999999998766677788777
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+.........+++.+|+|+|++|++++++++..++++++.+..++|||+||||+|+|||++++++|+++++|+++|++
T Consensus 243 ~~~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~l~~g~~~~~a~~~a~~ 322 (342)
T d1bx4a_ 243 KKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHY 322 (342)
T ss_dssp HHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHhhcccCceEEEEEcccceEEEEeCCceEEEecCCCCCCCccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 77666544444688899999999999999988877777666555589999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++++.|++.|
T Consensus 323 ~Aa~~v~~~Ga~~p 336 (342)
T d1bx4a_ 323 AASIIIRRTGCTFP 336 (342)
T ss_dssp HHHHHTTSSSSCCC
T ss_pred HHHHHHcCcCCCCC
Confidence 99999999999876
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Probab=100.00 E-value=9.8e-33 Score=226.98 Aligned_cols=232 Identities=29% Similarity=0.478 Sum_probs=166.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|+||+|.+|+++++.|+++||+++++..++.+|+.++++++ ++.|+++.+.+....+...+.. ...+....++
T Consensus 82 ig~vG~D~~G~~i~~~l~~~gv~~~~~~~~~~~t~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 155 (350)
T d2absa1 82 MGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN--EKERTLCTHLGACGSFRLPEDW----TTFASGALIF 155 (350)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE--TTEEEEEEECGGGGGCCCCTTH----HHHTTTCCEE
T ss_pred EecCCCChhhHhHHHHHHhcCCcccccccccccceEEEEEee--ccCcceEeeecccccccccccc----cccccccccc
Confidence 478999999999999999999999998887778999888887 4566666666666666554433 2567788999
Q ss_pred EEeccccccChH-HHHHHHHHhhhCC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCCcc-----
Q psy6977 81 YVSGFFLTVSPE-SILEVAKVALSCT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQTE----- 138 (239)
Q Consensus 81 ~~~g~~~~~~~~-~~~~~~~~~~~~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~~~----- 138 (239)
++.++....... ....+...++..+ .+++ +.. .++++++ ++|++|++.|++.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~N~~E~~~l~~~~~~~~~~~~~~ 235 (350)
T d2absa1 156 YATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTAL 235 (350)
T ss_dssp EEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-------
T ss_pred cceeeeeccccchhHHHHHHhhhhccceEEEecchhhhhhhhhcchhhhcccCCEEEecHHHHHHHhCCCCchhhHHHHh
Confidence 998876654443 3344444444444 3443 221 1444544 8999999999986432111
Q ss_pred ------CHHHHH---HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-----EEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 139 ------DLHAIA---LKISNLPKQNPNRERITIITQGDKPIILSQNGK-----TTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 139 ------~~~~~~---~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-----~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
+..+.. .++..... ...+++.+|+|+|++|+++++++. ..+++.|.++..+||||+||||+|+||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vvit~G~~G~~~~~~~~~g~~~~~~~~~p~~~~~~VVDttGAGDaF~ag 314 (350)
T d2absa1 236 STANKEHAVEVCTGALRLLTAGQ-NTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGG 314 (350)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTC-CCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHH
T ss_pred hhcchhhHHHHHHHHHHHHHhhh-hccCccEEEEECCCCCceeecCCCCcceeeeecccccCCCCCccCCCcHHHHHHHH
Confidence 111111 11111100 014788999999999999987642 345555555455899999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhccCcCCC
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQVSGCTLGL 239 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~~G~~~~~ 239 (239)
|++++++|+++++|+++|+.+|+.++++.|+++|+
T Consensus 315 ~l~~ll~g~~~~~al~~a~~~Aa~~v~~~Ga~l~~ 349 (350)
T d2absa1 315 FLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLSF 349 (350)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCCC
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHhcccCCCCCC
Confidence 99999999999999999999999999999999985
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=1.6e-32 Score=222.83 Aligned_cols=225 Identities=14% Similarity=0.163 Sum_probs=169.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~~ 78 (239)
+|++|+| +|+.+++.|+++||++.++...+ +|+.+++++.. ++++.+. .. ...+++++++. ....+.+..++
T Consensus 56 ~~~vGdd-~~~~i~~~l~~~gi~~~~i~~~~-~t~~~~~~~~~-~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~ 129 (313)
T d2f02a1 56 TGVLGGF-HGAFIANELKKANIPQAFTSIKE-ETRDSIAILHE-GNQTEIL-EA--GPTVSPEEISNFLENFDQLIKQAE 129 (313)
T ss_dssp EEEEEHH-HHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEET-TEEEEEE-EC--CCBCCHHHHHHHHHHHHHHHTTCS
T ss_pred EEEecCc-cHHHHHHHHHhhccCceEEEeec-CCceEEEEEeC-CCceEEe-ec--cccCCHHHHHHHHHHhhhhhcccc
Confidence 4788966 78999999999999999987654 57777777763 4443333 22 23444433332 12346788999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh---HH---hcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI---YL---VLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~---~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
+++++|+.+. ...+.+..+++.+++.+ .++. +.+.+.++ .. ++|+.|+..|++... ...+...+...
T Consensus 130 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~E~~~l~g~~~-~~~~~~~~~~~ 208 (313)
T d2f02a1 130 IVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDSLRQVLQGPWKPYLIKPNLEELEGLLGQDF-SENPLAAVQTA 208 (313)
T ss_dssp EEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHHHHHHHHSSCCCSEECCBHHHHHHHHTCCC-CSSCHHHHHHH
T ss_pred eEEEecccccccCHHHHHHHHHHHHhcCCceeecchHHHHHHHhhhcccceEEEehhhhHHHhhcccc-ccchhhHHHHH
Confidence 9999987654 45688899999999988 4444 33333332 22 899999999998632 23334433333
Q ss_pred HhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHH
Q psy6977 147 ISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226 (239)
Q Consensus 147 l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a 226 (239)
+.++.. .|++.+++|+|++|++++++++.+++++|++ +++||+||||+|+|||++++++|+++++|+++|+++|
T Consensus 209 ~~~~~~---~g~~~vivT~G~~Ga~~~~~~~~~~~~~~~v---~vvDttGAGD~f~ag~i~~l~~g~~~~~al~~A~a~a 282 (313)
T d2f02a1 209 LTKPMF---AGIEWIVISLGKDGAIAKHHDQFYRVKIPTI---QAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAG 282 (313)
T ss_dssp HTSGGG---TTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHh---cCCceeEEecccceEEEEeCCceEecccccC---CCCCCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 333322 4899999999999999999999999999988 8999999999999999999999999999999999999
Q ss_pred HHHHHhccCcCC
Q psy6977 227 QHIIQVSGCTLG 238 (239)
Q Consensus 227 ~~~~~~~G~~~~ 238 (239)
+.++++.|+..|
T Consensus 283 a~~~~~~g~~~~ 294 (313)
T d2f02a1 283 MANAQERMTGHV 294 (313)
T ss_dssp HHHHHSSSSSCC
T ss_pred HHHhCCCCCCCC
Confidence 999999998654
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Probab=99.97 E-value=7e-32 Score=218.21 Aligned_cols=220 Identities=14% Similarity=0.132 Sum_probs=168.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC-chhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV-PENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~ 79 (239)
+|+||+| .|+.+++.|+++||+++++..++ .|+.++...+ ..+..+. ......++++++. ......+..+++
T Consensus 56 ig~vG~D-~g~~i~~~L~~~gi~~~~v~~~~-~t~~~i~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
T d2abqa1 56 LGFLGGF-TGAYVRNALEKEEIGLSFIEVEG-DTRINVKIKG---KQETELN--GTAPLIKKEHVQALLEQLTELEKGDV 128 (306)
T ss_dssp EEEEEHH-HHHHHHHHHHHTTCEECCEEESS-CCEEEEEEES---SSCEEEB--CCCCCCCHHHHHHHHHHHTTCCTTCE
T ss_pred EEEecCc-cHHHHHHHHHhcccccccceeee-eeEEEEEEec---ccccccc--cccccCCHHHhhhhhhhHhhhccCCE
Confidence 5789999 79999999999999999998755 5666544433 2333332 1122222222221 122356678899
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhH-HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYL-HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~-~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
++++++.+. ...+....+++.+++.+ ++|+ +.+ +.....+ ++|..|+..+++....+.+...++++.+.+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~d~~~~~~~~~~~~~~~~l~~n~~E~~~~~~~~~~~~~~~~~~~~~~~~ 208 (306)
T d2abqa1 129 LVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIG 208 (306)
T ss_dssp EEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHHHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHH
T ss_pred EEEcCccccchHHHHHHHHHHHHHHcCCceeccchhhHHHHHhhhcceeecccccccccccccccccccchhhccccccc
Confidence 999887654 44577888899999888 5555 222 2333333 899999999998755445556677777777
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
. +++.+|+|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 209 ~------~~~~vvit~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~a~aa~~ 279 (306)
T d2abqa1 209 E------GIESILVSFAGDGALFASAEGMFHVNVPSG---EVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSAT 279 (306)
T ss_dssp T------TCCEEEEECGGGCEEEEETTEEEEECCCCC---CCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred c------cccceeeeecccCcccccccccccccccCC---ccCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 889999999999999999999999999987 8999999999999999999999999999999999999999
Q ss_pred HHhccCc
Q psy6977 230 IQVSGCT 236 (239)
Q Consensus 230 ~~~~G~~ 236 (239)
+++.|+.
T Consensus 280 ~~~~G~~ 286 (306)
T d2abqa1 280 AFSDGFC 286 (306)
T ss_dssp HHSSSCC
T ss_pred hcCCCCC
Confidence 9999963
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Probab=99.97 E-value=7.7e-31 Score=211.20 Aligned_cols=216 Identities=21% Similarity=0.274 Sum_probs=173.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|++|+.+++.|+++||++..+. +.+|+.+.+.++. +++|+++.+.+....++++.++. ..+...+++
T Consensus 60 i~~vG~D~~g~~~~~~l~~~gv~~~~~~--~~~t~~~~i~~~~-~g~~~~~~~~~~~~~~~~~~i~~----~~~~~~~~~ 132 (299)
T d1vm7a_ 60 VTCIGNDDYSDLLIENYEKLGITGYIRV--SLPTGRAFIEVDK-TGQNRIIIFPGANAELKKELIDW----NTLSESDIL 132 (299)
T ss_dssp EEEECSSHHHHHHHHHHHHTTEEEEEEC--SSCCCEEEEEECT-TSCEEEEEECGGGGGCCGGGCCH----HHHTTCSEE
T ss_pred EEeeeccchhHHHHHHHhhhcccccccc--ccccceeEEEecC-CCCeeEeccCCcchhCCHhHhCh----hhcccccce
Confidence 4789999999999999999999987654 4578888888875 67788887778788888877764 566788999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh---hhH-HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcC
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI---NYL-HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNL 150 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p~~-~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~ 150 (239)
++++..+ ... ..+...+.+ .++. ... ..+.+.+ ++|.+|+............+.+...+.+...
T Consensus 133 ~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~ 206 (299)
T d1vm7a_ 133 LLQNEIP---FET---TLECAKRFNGIVIFDPAPAQGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLEL 206 (299)
T ss_dssp EECSSSC---HHH---HHHHHHHCCSEEEECCCSCTTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHT
T ss_pred eeccccc---chh---hhHhhhhcCceEEEecCcchhhhHHHHhhcccccccHHHHHhhhccccccchhhhhhhhhhhcC
Confidence 9976443 222 223344444 2222 111 1334444 8999999888777555667788888888875
Q ss_pred CCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q psy6977 151 PKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 151 ~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~ 230 (239)
+++.+++|+|++|++++++++.++.+++++ +++||+||||+|+|||++++.+|+++++|+++|+++|+.++
T Consensus 207 ------~~~~vvvt~G~~g~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~Ag~i~~l~~g~~~~~al~~a~~~aa~~~ 277 (299)
T d1vm7a_ 207 ------GVKNVIVKLGDKGVLLVNKNEKKHFPTFKV---KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISV 277 (299)
T ss_dssp ------TCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred ------CCcEEEEeCCCCceEEEeccceEEEeeeee---eeECCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999998 89999999999999999999999999999999999999999
Q ss_pred HhccCcCC
Q psy6977 231 QVSGCTLG 238 (239)
Q Consensus 231 ~~~G~~~~ 238 (239)
+++|++++
T Consensus 278 ~~~G~~~~ 285 (299)
T d1vm7a_ 278 TRLGAQSS 285 (299)
T ss_dssp TSSSSGGG
T ss_pred CcCCCCCC
Confidence 99998763
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Probab=99.97 E-value=2.1e-30 Score=209.06 Aligned_cols=219 Identities=18% Similarity=0.213 Sum_probs=163.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEec---CCCceeEeechhhhhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITD---NGKARSLVANLAAANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~---~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~ 76 (239)
+|+||+|++|+.+++.|+++||+++++.+ .+.+|+.+++.... .++++++....++...+.+++... +.+..
T Consensus 52 i~~vG~D~~g~~i~~~L~~~gI~~~~i~~~~~~~t~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~ 127 (308)
T d2dcna1 52 IAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE----EYVKS 127 (308)
T ss_dssp ECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH----HHHTT
T ss_pred EEEeCCcccccccccccccccccccceeeeecccceEEEEEeccccccccccceeeecccccccccccccc----ccccc
Confidence 57899999999999999999999999886 46688877665442 122334444445555665555443 67788
Q ss_pred eeEEEEeccccccCh---HHHHHHHHHhhhCC-C----CCh-h---hHH---HHhhHH-----hcCHHHHHHHHHHcCCC
Q psy6977 77 AEYYYVSGFFLTVSP---ESILEVAKVALSCT-I----RNI-N---YLH---HRFIYL-----VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 77 ~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g-~----~~~-p---~~~---~~~~~~-----~~n~~E~~~l~~~~~~~ 136 (239)
+++++.+.+...... +.+..+.+.++..+ . ++. + ... +.+... .+|.+|...+.+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 203 (308)
T d2dcna1 128 ADLVHSSGITLAISSTAKEAVYKAFEIASNRSFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILGE---- 203 (308)
T ss_dssp CSEEEEEHHHHHSCHHHHHHHHHHHHHCSSEEEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSC----
T ss_pred ceEEEeeccccccccchhHHHHHHHhhccccccccceeccccchhhhhhhhhhhccccccccccchhhhhhhhcch----
Confidence 999999876554332 33444444444333 2 121 1 111 222222 6788888777654
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHH
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLS 216 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~ 216 (239)
.+++.+.+.+.. +++.||+|+|++|++++++++.++++++++ +++||+||||+|+|||++++++|++++
T Consensus 204 -~~~~~~~~~l~~-------~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDt~GAGDaf~ag~i~~l~~g~~~~ 272 (308)
T d2dcna1 204 -SDPDKAAKAFSD-------YAEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGFEME 272 (308)
T ss_dssp -CCHHHHHHHHTT-------TEEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTCCHH
T ss_pred -hhhhhhhhhccc-------ceeEEeeccccCceeeecCCccccccccee---eecCCCChHHHHHHHHHHHHHcCCCHH
Confidence 567766665543 789999999999999999999999999998 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCcCC
Q psy6977 217 VCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 217 ~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
+|+++|+++|+.+++++|++.+
T Consensus 273 ~a~~~a~~~aa~~~~~~G~~~~ 294 (308)
T d2dcna1 273 KALDYAIVASTLNVMIRGDQEN 294 (308)
T ss_dssp HHHHHHHHHHHHHTTSSSSSTT
T ss_pred HHHHHHHHHHHHHhCcCCCCcC
Confidence 9999999999999999998753
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Probab=99.97 E-value=1.8e-30 Score=209.15 Aligned_cols=214 Identities=18% Similarity=0.210 Sum_probs=163.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEee--chhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVA--NLAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~--~~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+|.+|+.+++.|+++||++.++...+.+++.+.+.+.. ++++.+.. .......++.++... ..+++.+
T Consensus 53 ~~~iG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~ 127 (302)
T d1v19a_ 53 VGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLP-LGQGRVFYYRKGSAGSALAPGAFDP----DYLEGVR 127 (302)
T ss_dssp EEEEESSHHHHHHHHHHHHHTCBCTTEEEESSCCCEEEEEECT-TSCEEEEEECTTCSGGGCCTTSSCG----GGGTTCS
T ss_pred EEEEcCCcccccchhhhhhcccccchhccccccccccchhhcc-ccccccccccccccchhhccccccH----HHHhccc
Confidence 4789999999999999999999999888766666677777766 44444432 223334555544442 6788999
Q ss_pred EEEEeccccccCh---HHHHHHHHHhhhCC---C--CCh-h------h----HHHHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 79 YYYVSGFFLTVSP---ESILEVAKVALSCT---I--RNI-N------Y----LHHRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 79 ~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~--~~~-p------~----~~~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
+++++++.....+ +....+++..++.+ . .+. + . ..++++++ +.|++|+..+.+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~e~~~~~~~---- 203 (302)
T d1v19a_ 128 FLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGR---- 203 (302)
T ss_dssp EEEEETHHHHHCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSS----
T ss_pred EEeeeccccccchhHHHHHHHHHHHHHhcCCccccccchhhhccchhhhHHHHHhhhhhccchhhhhhhhhhhhhh----
Confidence 9999877665433 56677888888777 2 222 1 1 11334444 7899998776543
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHH
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLS 216 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~ 216 (239)
. .+.+..+ +.+.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+|++++|++++
T Consensus 204 ---~---~~~~~~~------~~~~viit~G~~G~~~~~~~~~~~~p~~~v---~vvDttGAGDaf~a~~~~~~~~g~~~~ 268 (302)
T d1v19a_ 204 ---V---EEALRAL------SAPEVVLKRGAKGAWAFVDGRRVEGSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPVE 268 (302)
T ss_dssp ---T---THHHHHT------CCSEEEEECTTSCEEEEETTEEEECCCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred ---h---hhhhhhc------cceEEEEecCCCCCcccccccccccccccc---ccCCCCChhHHHHHHHHHHHHcCCCHH
Confidence 1 1223333 778999999999999999999999999988 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCcCC
Q psy6977 217 VCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 217 ~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
+|+++|+++|+.++++.|++.+
T Consensus 269 ~a~~~a~~~Aa~~v~~~G~~~~ 290 (302)
T d1v19a_ 269 ERLRLANLLGASVAASRGDHEG 290 (302)
T ss_dssp HHHHHHHHHHHHHHTSSSSSTT
T ss_pred HHHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999998754
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Probab=99.97 E-value=2.1e-31 Score=216.57 Aligned_cols=225 Identities=14% Similarity=0.096 Sum_probs=164.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~ 77 (239)
+|.+|+| +|+.+.+.|++.|++++...+ .+.+|++++.+++.+++.++.+.+++ ..+++.+++. ......+.++
T Consensus 59 ~~~vG~d-~g~~~~~~L~~~~~~i~~~~i~~~~~T~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 135 (319)
T d2ajra1 59 TGFVGGY-MGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAINFPG--PDVTDMDVNHFLRRYKMTLSKV 135 (319)
T ss_dssp EEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESSCCEEEEEEEETTTTEEEEEECCC--CCCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCc-cHHHHHHHHHHhCCCCCceeEecCCCCceEEEEEECCCCeEEEEecCC--CcCCHHHHHHHHHHHHhhcccc
Confidence 4688955 899999999988766554332 24578888888886555555554433 3343333321 1223668899
Q ss_pred eEEEEeccccc-cChHHHHHHHHHhhhCC---CCCh-hh-HHHHhhHH------hcC-HHHHHHHHHHcCCCccCHHHHH
Q psy6977 78 EYYYVSGFFLT-VSPESILEVAKVALSCT---IRNI-NY-LHHRFIYL------VLI-DFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 78 ~~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~-p~-~~~~~~~~------~~n-~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
++++++|+.+. ++.+.+..+++.+++++ ++|+ |. +..+++.. ++| ++|++.+++....+.++..+++
T Consensus 136 ~~v~~sGs~~~~~~~~~~~~l~~~a~~~~~~v~~D~s~~~~~~~~~~~~~~~~ikpn~~~e~~~l~g~~~~~~~d~~~~~ 215 (319)
T d2ajra1 136 DCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLA 215 (319)
T ss_dssp SEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHHHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHH
T ss_pred cEEEEecCCcccccHHHHHHHHHHHHhcCCcccccchhhHHHHHhhhcccCcEEeeccHHHHHHHHhhccCCHHHHHHHH
Confidence 99999986543 66788999999999998 6777 43 33333222 677 4577777776444445566667
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-EEEEeccCCCCCCcccCCCCchhhhHHHHHHHH-cCCCHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGK-TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLI-KGEPLSVCIECG 222 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~-~g~~~~~a~~~a 222 (239)
+.+.++ | +.+|||+|.+|++++++++ .++.++|++ +++||+||||+|+|||+++++ +|.++++|+++|
T Consensus 216 ~~l~~~------~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~ag~i~~~l~~g~~~~~a~~~a 285 (319)
T d2ajra1 216 EKLAEK------S-QVSVVSYEVKNDIVATREGVWLIRSKEEI---DTSHLLGAGDAYVAGMVYYFIKHGANFLEMAKFG 285 (319)
T ss_dssp HHHHHH------S-SEEEEEETTTEEEEECSSCEEEEEESSCC---CGGGCTTHHHHHHHHHHHHHHHHCSCHHHHHHHH
T ss_pred hhhhhh------c-ceeeeecccceeeeeccCCceEecccccC---CCCCCCChHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 777774 4 6778999999999988765 444455566 899999999999999999976 699999999999
Q ss_pred HHHHHHHHHhccCcCC
Q psy6977 223 VWAAQHIIQVSGCTLG 238 (239)
Q Consensus 223 ~~~a~~~~~~~G~~~~ 238 (239)
+++|+.++++.|+.+|
T Consensus 286 ~a~aa~~~~~~g~~~~ 301 (319)
T d2ajra1 286 FASALAATRRKEKYMP 301 (319)
T ss_dssp HHHHHHHTTSSSCCCC
T ss_pred HHHHHHHhCCCCCCCC
Confidence 9999999999998765
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=2e-29 Score=202.56 Aligned_cols=222 Identities=20% Similarity=0.253 Sum_probs=160.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.++++||++.++.+. ...|+.....+.. ++.+..+..........++.... ..........
T Consensus 58 ~~~vG~d~~~~~~~~~l~~~gi~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 134 (306)
T d1rkda_ 58 IACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNG-EGENVIGIHAGANAALSPALVEA--QRERIANASA 134 (306)
T ss_dssp EEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECT-TSCEEEEEECGGGGGCCHHHHHT--THHHHHHCSE
T ss_pred EEEECCccccchhhhccccccccccccccccccccccceeeEee-cCcceeeeeccchhhhhhhhhhh--hHhhhhhhee
Confidence 478999999999999999999999998864 5566666666654 66666665544433333322111 1122223334
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---C---CCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---I---RNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~---~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+... .....+............+ . .+. +.+++++++. ++|.+|+..+++.......+.....+.+..
T Consensus 135 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~ 211 (306)
T d1rkda_ 135 LLMQ---LESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHE 211 (306)
T ss_dssp EEEC---SSSCHHHHHHHHHHHHHTTCEEEECCCSCCCCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHH
T ss_pred eeec---ccchhhhhhhHHHHhhhcccccccCchhhhhhHHHHHhhcccccCCHHHHHHHhCCCcccchhHHHHHHHHhh
Confidence 4332 2233455555555555555 1 111 3344555555 999999999988644333444555555555
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
. +++.+|+|+|+.|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 212 ~------~~~~vivt~G~~g~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~Ag~l~~l~~g~~~~~a~~~a~~~aa~~ 282 (306)
T d1rkda_ 212 K------GIRTVLITLGSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIA 282 (306)
T ss_dssp T------TCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred c------CCcEEEEecCCceEEEeecCceEEeCCccC---ccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 3 889999999999999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHhccCcC
Q psy6977 230 IQVSGCTL 237 (239)
Q Consensus 230 ~~~~G~~~ 237 (239)
|++.|++.
T Consensus 283 v~~~G~~~ 290 (306)
T d1rkda_ 283 VTRKGAQP 290 (306)
T ss_dssp HTSSSSGG
T ss_pred hCCCCCCC
Confidence 99999875
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Probab=99.96 E-value=3e-30 Score=207.61 Aligned_cols=217 Identities=24% Similarity=0.320 Sum_probs=150.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCC-CceeEEEEEecCCCceeEeechh--hhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTE-PTGTCAVLITDNGKARSLVANLA--AANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~-~t~~~~~~~~~~~~~r~~~~~~~--~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|+||+|.+|+++++.|++.||+++++...+. +|+.+.+.++. .+.+++..... ....+++.+. ..+...
T Consensus 46 v~~vG~D~~g~~i~~~L~~~gi~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 118 (304)
T d1tyya_ 46 IGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTA-DGERSFTYLVHPGADTYVSPQDL------PPFRQY 118 (304)
T ss_dssp EEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC--------CEEECCSSCGGGGCCGGGC------CCCCTT
T ss_pred EEEecCChHHHHHHHhhhccccccccccccccccccceeeEeec-ccccccceecccccccccchhhh------hhhccc
Confidence 57899999999999999999999999987544 55555555544 55665544332 2233333322 345677
Q ss_pred eEEEEeccccc--cChHHHHHHHHHhhhCC-----CCCh-hhHH-----------HHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLT--VSPESILEVAKVALSCT-----IRNI-NYLH-----------HRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~--~~~~~~~~~~~~~~~~g-----~~~~-p~~~-----------~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++++.+.... .+.+....+++.+++.+ +++. +.++ ..+... ..+........
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 193 (304)
T d1tyya_ 119 EWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLS----- 193 (304)
T ss_dssp CEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHH-----
T ss_pred eEEEEecccccccchHHHHHHHHHHhhhcCceEeeccccccccccchhhhhhhhhhccccccccccccccccccc-----
Confidence 78888764432 33466778888888877 3332 2211 122222 23333332222
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC-
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP- 214 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~- 214 (239)
..+....+.+.+.++ |++.+|+|+|++|++++++++.+++|+|++ +++||+||||+|+|||+++|.+|++
T Consensus 194 ~~~~~~~a~~~~~~~------g~~~vivt~G~~Ga~~~~~~~~~~~p~~~v---~vvdt~GAGDaf~ag~~~~l~~g~~~ 264 (304)
T d1tyya_ 194 GASHWQDARYYLRDL------GCDTTIISLGADGALLITAEGEFHFPAPRV---DVVDTTGAGDAFVGGLLFTLSRANCW 264 (304)
T ss_dssp CCSSGGGGSSTTGGG------TCSCEEEECGGGCEEEESSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHTTSSSC
T ss_pred ccchHHHHHHHHHhc------ccceeeeecccceeeeeccCCccccCcccc---cCCCCCCchHHHHHHHHHHHHhCCCc
Confidence 224444454445553 889999999999999999999999999988 7999999999999999999999987
Q ss_pred ----HHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 215 ----LSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 215 ----~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
+++|+++|+++|+.++++.|++.+
T Consensus 265 ~~~~l~~al~~a~~~As~~v~~~G~~~~ 292 (304)
T d1tyya_ 265 DHALLAEAISNANACGAMAVTAKGAMTA 292 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGSSSTTTT
T ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 789999999999999999998863
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=6.3e-29 Score=200.15 Aligned_cols=222 Identities=20% Similarity=0.273 Sum_probs=159.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++... ..+|..+.++++. ++.++++........+....+.. .........+
T Consensus 58 is~vG~D~~g~~i~~~L~~~gi~~~~i~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 134 (308)
T d2fv7a1 58 VCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNN-EGQNIIVIVAGANLLLNTEDLRA--AANVISRAKV 134 (308)
T ss_dssp EEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECT-TSCEEEEEECGGGGGCCHHHHHH--THHHHHHCSE
T ss_pred EEEeccccccccccchhcccccccccccccccccccceEEEEec-CCceEEEeeecchhhhchhhhhh--hhhhcccceE
Confidence 478999999999999999999999998864 4466666666654 67777766555444444432221 1233344455
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hhH----HHHh--hHH-hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NYL----HHRF--IYL-VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~~----~~~~--~~~-~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
..+ ....+++......+.++..+ .++. +.. .... ... ..+.+|..........+..........+.
T Consensus 135 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 211 (308)
T d2fv7a1 135 MVC---QLEITPATSLEALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLL 211 (308)
T ss_dssp EEE---CSSSCHHHHHHHHHHHHHTTCEEEECCCSCCTTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHH
T ss_pred Eee---ccccchHHHHHHHHHhhhcCceEEecccchhhhhhhhHHhhhhhhhhhHHHHHHhhhhhccchhhhhhHHHHHH
Confidence 555 23456777788888888888 3333 111 1111 222 67777776655443323344455556666
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECC--eEEEEeccCCCCCCcccCCCCchhhhHHHHHHH--HcCCCHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNG--KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQL--IKGEPLSVCIECGVW 224 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l--~~g~~~~~a~~~a~~ 224 (239)
+. +++.+++|+|++|+++++++ ..+++|++++ +++||+||||+|+|||++++ .+|+++++|+++|++
T Consensus 212 ~~------~~~~vivT~G~~G~~~~~~~~~~~~~~p~~~v---~vvDttGAGDaF~ag~~~~l~~~~~~~~~~a~~~a~~ 282 (308)
T d2fv7a1 212 KR------GCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNF 282 (308)
T ss_dssp TT------TCSEEEEECGGGCEEEEESSCCSCEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHH
T ss_pred hc------CCCEEEEEecccceeeecccccceeecccccc---cccCCCChhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 64 89999999999999999864 4778888887 79999999999999999977 589999999999999
Q ss_pred HHHHHHHhccCcC
Q psy6977 225 AAQHIIQVSGCTL 237 (239)
Q Consensus 225 ~a~~~~~~~G~~~ 237 (239)
+|+.++++.|++.
T Consensus 283 ~aa~~v~~~G~~~ 295 (308)
T d2fv7a1 283 IAAVSVQAAGTQS 295 (308)
T ss_dssp HHHHHHTSSSGGG
T ss_pred HHHHHhCCCCCCC
Confidence 9999999999986
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Probab=99.91 E-value=3.8e-25 Score=176.53 Aligned_cols=204 Identities=16% Similarity=0.158 Sum_probs=139.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.+|+|..|. ++.|+++||+++++.. +.+|....++.. ++..|..+.... ...++.++++ ..+++++
T Consensus 51 i~~vG~D~~~~--~~~l~~~gi~~~~i~~-~~~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~ 118 (288)
T d1vk4a_ 51 ITKCTREDVSK--FSFLRDNGVEVVFLKS-PRTTSIENRYGS-DPDTRESFLISA-ADPFTESDLA-------FIEGEAV 118 (288)
T ss_dssp EEEECTTTGGG--GTTTGGGTCEEEEEEC-SSCEEEEEEC------CCEEEEEEC-CCCCCGGGGG-------GCCSSEE
T ss_pred EEEeCCChHHH--HHHHHHcCCcEEeecc-CCcceEEEEEec-CCCeeEEEeehh-hhcCChhhhh-------hhccceE
Confidence 57899999985 4889999999999875 335555444443 355665554432 2333333222 1357788
Q ss_pred EEeccccc-cChHHHHHHHHHhhhCC---CCCh-----------------hhHHHHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 81 YVSGFFLT-VSPESILEVAKVALSCT---IRNI-----------------NYLHHRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 81 ~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~-----------------p~~~~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
++.+.... .+.+. ++.+++.+ .++. +.+.++++++ ++|++|+..+++.
T Consensus 119 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~i~~N~~E~~~l~~~---- 190 (288)
T d1vk4a_ 119 HINPLWYGEFPEDL----IPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGT---- 190 (288)
T ss_dssp EECCSSTTSSCGGG----HHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSC----
T ss_pred EEchhhhccchHHH----HHHHHHhCcceeeccccccccccccccccccHHHHHHHHHhCCcccCCHHHHHHHhhh----
Confidence 88654432 33333 33444444 1111 1233666665 9999999999865
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHH-cCCCH
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLI-KGEPL 215 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~-~g~~~ 215 (239)
..+.+.+..+.+. + ..+|++.|..|++++ .+..++.+.+++ +++||+||||+|+|||+++++ +|.++
T Consensus 191 -~~~~~~~~~~~~~------~-~~~v~~~g~~~~~~~-~~~~~~~~~~~~---~vvDttGAGDsF~ag~i~~~l~~g~~~ 258 (288)
T d1vk4a_ 191 -NDLRESCRIIRSF------G-AKIILATHASGVIVF-DGNFYEASFRSW---SLEGRTGRGDTCTAAFLVGFVFKKMSI 258 (288)
T ss_dssp -SCHHHHHHHHHHT------T-CSSEEEEETTEEEEE-SSSEEEEECCCS---SGGGGTTHHHHHHHHHHHHHHTSCCCH
T ss_pred -hhHHHHHhhhhcc------c-ceeeeccccceeecc-ccccccccCCCC---ccCCCCCHHHHHHHHHHHHHHHCCCCH
Confidence 6777777777764 4 345666777777665 566777777777 899999999999999999975 78999
Q ss_pred HHHHHHHHHHHHHHHHhccCc
Q psy6977 216 SVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~~ 236 (239)
++|+++|+++|+.++++.|+.
T Consensus 259 ~~a~~~A~~~Aa~~v~~~Gp~ 279 (288)
T d1vk4a_ 259 EKATKFAAAVTSVKMRHPGPL 279 (288)
T ss_dssp HHHHHHHHHHHHHHTTSSSSC
T ss_pred HHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999999974
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Probab=99.61 E-value=3.9e-15 Score=117.92 Aligned_cols=149 Identities=14% Similarity=0.155 Sum_probs=108.1
Q ss_pred cceeEEEEecccccc-ChHHHHHHHHHhhhCC-----CCCh------------h-----hHHHHhhHH---hcCHHHHHH
Q psy6977 75 QNAEYYYVSGFFLTV-SPESILEVAKVALSCT-----IRNI------------N-----YLHHRFIYL---VLIDFEALA 128 (239)
Q Consensus 75 ~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~g-----~~~~------------p-----~~~~~~~~~---~~n~~E~~~ 128 (239)
.+.|.+.. |+.... ..+.+.++++..+..+ ++|+ + ...+++|++ +||..|++.
T Consensus 74 ~~~daI~t-G~l~s~~~v~~i~~~l~~~k~~~p~~~~v~DPVm~d~~~~~~~~~~~~~~~~~~Llp~adiitPN~~Ea~~ 152 (288)
T d1vi9a_ 74 HTCDAVLS-GYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEI 152 (288)
T ss_dssp GGCCEEEE-CCCSCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCTTHHHHHHHTHHHHCSEECCCHHHHHH
T ss_pred ccCCEEEE-eccCChHHHHHHHHHHHHHhhccCCccEEEcceeecCCCCcCCChHHHHHHHHHhcccCCEEecCHHHHHH
Confidence 35777765 776542 1245666666665432 3333 1 123677776 999999999
Q ss_pred HHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc--------EEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 129 FAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP--------IILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 129 l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G--------~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
|+|....+.++..+++++++++ |++.||+|.+..| .+++++++.+++..|.++ ..+.|++|+||+
T Consensus 153 L~g~~i~~~~~~~~aa~~L~~~------g~~~Vvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~GtGD~ 225 (288)
T d1vi9a_ 153 LCEHAVNNVEEAVLAARELIAQ------GPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVD-FGMRQPVGVGDV 225 (288)
T ss_dssp HHTSCCCSHHHHHHHHHHHHHT------SCSEEEECCCGGGSSSTTEEEEEEECSSCEEEEEEECCC-CTTCCCSCHHHH
T ss_pred hhccccchhHHHHHHHHHHHhc------CCCEEEEEecCccccccCceeEEEEeCCceEEecccccc-cCCCCCCChhHH
Confidence 9998665667788888899885 8999999976644 355666666666555542 257899999999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
|+|+|++.|++|.++++|+++|.+.-...++
T Consensus 226 fsa~l~a~l~~G~~l~~A~~~A~~~v~~~l~ 256 (288)
T d1vi9a_ 226 TSGLLLVKLLQGATLQEALEHVTAAVYEIMV 256 (288)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999886555543
|
| >d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Thermus thermophilus [TaxId: 274]
Probab=99.39 E-value=2.7e-12 Score=99.82 Aligned_cols=109 Identities=17% Similarity=0.250 Sum_probs=89.2
Q ss_pred HHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc----E-EEEECCeEEEEeccC
Q psy6977 114 HRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP----I-ILSQNGKTTEFPVQR 185 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G----~-~~~~~~~~~~~~~~~ 185 (239)
+++|++ .||..|+..|++....+.++..++++.+.++ |++.|+||.|... . +++++++.++...++
T Consensus 126 ~Llp~adiiTPN~~Ea~~L~g~~~~~~~d~~~aa~~L~~~------g~~~Vlitg~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (258)
T d1ub0a_ 126 RLFPLADLVTPNRLEAEALLGRPIRTLKEAEEAAKALLAL------GPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPR 199 (258)
T ss_dssp HTGGGCSEECCBHHHHHHHHCSCCCSHHHHHHHHHHHHTT------SCSCEEEEEEECC---EEEEEEETTEEEEEEECC
T ss_pred hhcccceeecCCHHHHhhhcCCCCCCHHHHHHHHHHHHHh------CCCeEEEeccccccccccceeccCCeEEecccce
Confidence 566665 9999999999998665667778888888885 9999999976432 2 455677777888777
Q ss_pred CCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 186 LPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 186 ~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+ ...++.|+||.|.++|++.|++|.++++|++.|...-...+.
T Consensus 200 ~---~~~~~~GtGd~~asaia~~La~G~~l~~Av~~A~~~v~~~i~ 242 (258)
T d1ub0a_ 200 V---HTRNTHGTGCTLSAAIAALLAKGRPLAEAVAEAKAYLTRALK 242 (258)
T ss_dssp C---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred e---cCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 6 567889999999999999999999999999999887666653
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.20 E-value=1e-10 Score=92.95 Aligned_cols=106 Identities=17% Similarity=0.192 Sum_probs=79.2
Q ss_pred HHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC------cEEEEECC--------
Q psy6977 114 HRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK------PIILSQNG-------- 176 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~------G~~~~~~~-------- 176 (239)
.++|.+ .||..|++.|+|.+..+.++..+++++++++ |+++||||-|.. +..+....
T Consensus 136 ~Llp~adiITPN~~Ea~~Ltg~~~~~~~~~~~aa~~L~~~------g~~~VvvTg~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (309)
T d1lhpa_ 136 KVVPVADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSM------GPDTVVITSSNLLSPRGSDYLMALGSQRTRAPDG 209 (309)
T ss_dssp TTGGGCSEECCCHHHHHHHHTCCCCSHHHHHHHHHHHHHH------SCSEEEECCCCCCCTTCTTEEEEEEEEEEC---C
T ss_pred hhcCcCcEEeccHHHHhHHhccccCCHHHHHHHHHHHHhc------CCCEEEEEccccCCCCCCcEEEEeccceeeeccc
Confidence 377766 9999999999998666677888899999985 999999997642 22221110
Q ss_pred ----eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q psy6977 177 ----KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG-EPLSVCIECGVWAAQHI 229 (239)
Q Consensus 177 ----~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g-~~~~~a~~~a~~~a~~~ 229 (239)
..++++.|.+ ..+++|+||.|+|+|++.+++| .++++|++.|...=...
T Consensus 210 ~~~~~~~~~~~~~i----~~~~~GtGD~fsa~l~a~l~~g~~~L~~A~~~A~~~v~~~ 263 (309)
T d1lhpa_ 210 SVVTQRIRMEMHKV----DAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHV 263 (309)
T ss_dssp CCEEEEEEEEEECC----SSCCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred cceeeeEEEeeccc----CCCCCcccHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 1234555555 2467899999999999999877 59999999998764443
|
| >d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Salmonella typhimurium [TaxId: 90371]
Probab=99.15 E-value=1.2e-10 Score=90.58 Aligned_cols=110 Identities=10% Similarity=0.050 Sum_probs=82.3
Q ss_pred HHhhHH---hcCHHHHHHHHHHcC-CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-----EEEEECCeEEEEecc
Q psy6977 114 HRFIYL---VLIDFEALAFAKQQN-FQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-----IILSQNGKTTEFPVQ 184 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~ 184 (239)
+++|++ .||..|+..|.+... .+.++.+++++.+.++ |++.|++|-|... .+++++++.+....+
T Consensus 128 ~Llp~adviTPN~~Ea~~Ll~~~~~~~~~~~~~aa~~l~~~------g~~~Vlikg~~~~~~~~~~~~~~~~~~~~~~~~ 201 (266)
T d1jxha_ 128 RLLPQVSLITPNLPEAAALLDAPHARTEQEMLAQGRALLAM------GCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAP 201 (266)
T ss_dssp HTGGGCSEEECBHHHHHHHHTCCCCCSHHHHHHHHHHHHHT------TCSEEEEBC---------CEEECSSCEEEC---
T ss_pred HhhhhhheecCCHHHHHHHhcCCcccChHHHHHHHHHHHhc------CCceEEEeccccCCCcceEEEEcCCceEEEeec
Confidence 567776 999999998887532 2345567778888885 9999999976533 356667766666666
Q ss_pred CCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 185 RLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 185 ~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++ ...++.|+||.|.+++++.|++|.++++|++.|...-...+..
T Consensus 202 ~~---~~~~~hGTGc~lasaiaa~La~G~~l~~Av~~A~~~v~~~i~~ 246 (266)
T d1jxha_ 202 RV---NTKNTHGTGCTLSAALAALRPRHRSWGETVNEAKAWLSAALAQ 246 (266)
T ss_dssp CC---CCSCCBTHHHHHHHHHHHHGGGSSSHHHHHHHHHHHHHHHHTT
T ss_pred cc---cCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 66 5667789999999999999999999999999998877776653
|
| >d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Bacillus subtilis [TaxId: 1423]
Probab=97.95 E-value=3e-05 Score=59.31 Aligned_cols=142 Identities=11% Similarity=0.012 Sum_probs=88.2
Q ss_pred hhcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh------hhHH----HHhhHH-----hcCHHHHHHH
Q psy6977 71 NKLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI------NYLH----HRFIYL-----VLIDFEALAF 129 (239)
Q Consensus 71 ~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~------p~~~----~~~~~~-----~~n~~E~~~l 129 (239)
.+..+.++.++++- ..++. +.+...++.+.+.+ ++|+ +... +++... ++|..|+..|
T Consensus 53 ~e~~~~a~alviN~--Gtl~~~~~~~m~~a~~~a~~~~~PvVLDPVgvgas~~R~~~~~~ll~~~~~tVI~gN~~Ei~~L 130 (269)
T d1ekqa_ 53 ADMAKIAGALVLNI--GTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHT 130 (269)
T ss_dssp HHHHHHSSEEEEEC--TTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHH
T ss_pred HHHHHhccceEEec--CCCCHHHHHHHHHHHHHHHHcCCCEEECCcCCCCchhHHHHHHHHHHhCCCceEcCCHHHHHHH
Confidence 36777889999852 22333 34445556667777 6665 2222 445432 8999999999
Q ss_pred HHHcC---------CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 130 AKQQN---------FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 130 ~~~~~---------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
.|... .+.++..++++.+.++. + ..|++ .|+.. ++.+++..+.+..-.. .....+|.||.
T Consensus 131 ~g~~~~~~~gvd~~~~~~d~~~~A~~la~~~-----~-~vVvl-kG~~D-~I~dg~~~~~~~~G~~---~m~~itGtGc~ 199 (269)
T d1ekqa_ 131 VGVTDWLIKGVDAGEGGGDIIRLAQQAAQKL-----N-TVIAI-TGEVD-VIADTSHVYTLHNGHK---LLTKVTGAGCL 199 (269)
T ss_dssp CC---------------HHHHHHHHHHHHHH-----T-SEEEE-CSSSE-EEECSSCEEEECCCCG---GGGGSTTHHHH
T ss_pred hCCccCCcCCcCCcccHHHHHHHHHHHHHhc-----C-CEEEe-cCCce-EEEeCCeeEEecCCCh---hhccCCcchHH
Confidence 87421 12244566778887752 3 34555 45554 3445666666554332 34445899999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
+.|.+...+..+.++.+|+..|...
T Consensus 200 Ls~~iaa~la~~~~~~~A~~~A~~~ 224 (269)
T d1ekqa_ 200 LTSVVGAFCAVEENPLFAAIAAISS 224 (269)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9988888888899998888766653
|
| >d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.54 E-value=0.00052 Score=52.05 Aligned_cols=139 Identities=10% Similarity=-0.006 Sum_probs=81.4
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh------hhHH----HHhhHH----hcCHHHHHHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI------NYLH----HRFIYL----VLIDFEALAFAK 131 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~------p~~~----~~~~~~----~~n~~E~~~l~~ 131 (239)
+..+.++.++++- ..++. +.+..+++.+.+.+ ++|+ +... +++.+- .+|..|+..|.|
T Consensus 52 e~~~~a~al~iN~--Gtl~~~~~~~m~~a~~~A~~~~~PvVLDPVgvgas~~R~~~~~~ll~~~~~vItgN~~Ei~~L~g 129 (264)
T d1v8aa_ 52 EMIRLADAVVINI--GTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLG 129 (264)
T ss_dssp HHHHHCSEEEEEC--TTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHH
T ss_pred HHHHhcCceEeeC--CCCCHHHHHHHHHHHHHHHHcCCCEEEcCcccCcchhHHHHHHHHhccCCcEEcCCHHHHHHHhC
Confidence 6677788888852 22333 34555556666666 6665 2221 444332 899999999998
Q ss_pred HcCC---------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhh
Q psy6977 132 QQNF---------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFV 202 (239)
Q Consensus 132 ~~~~---------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ 202 (239)
.... ..++..++++.+.++. | .+|+--|+...+ .++++.+.++.... .....+|.||.+.
T Consensus 130 ~~~~~~gvd~~~~~~~d~~~~a~~lA~~~-----~--~vVvlkG~~D~I-~dg~~~~~~~~G~~---~m~~itGtGc~Ls 198 (264)
T d1v8aa_ 130 EEGKTRGVDSLEYGEEEAKKLTMNAAREF-----N--TTVAVTGAVDYV-SDGRRTFAVYNGHE---LLGRVTGTGCMVA 198 (264)
T ss_dssp HHC----------CHHHHHHHHHHHHHHT-----T--SEEEEESSSEEE-ECSSCEEEECCCCG---GGGGSTTHHHHHH
T ss_pred cccCCCCCCcccccHHHHHHHHHHHHHHh-----C--CEEEecCCeeEE-EcCCEEEEeCCCCc---hhccCCcccHHHH
Confidence 6421 1244556777777752 3 344445766544 46666776665442 3444578999865
Q ss_pred HHHHHHHHcCCCHHHHHHHHHH
Q psy6977 203 GGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 203 ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+...+..+ +..++...|..
T Consensus 199 ~~iaa~la~~-~~~~Aa~~A~~ 219 (264)
T d1v8aa_ 199 ALTGAFVAVT-EPLKATTSALV 219 (264)
T ss_dssp HHHHHHHTTS-CHHHHHHHHHH
T ss_pred HHHHHHHhcC-CHHHHHHHHHH
Confidence 5544444555 55566555443
|
| >d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein TM0922, C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.51 E-value=0.00034 Score=53.70 Aligned_cols=143 Identities=10% Similarity=0.032 Sum_probs=83.5
Q ss_pred hcccceeEEEEeccccccChHHHHHHHHHhhhCC---CCChhhHH----HHhhH-----H-hcCHHHHHHHHHHcCCCcc
Q psy6977 72 KLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNINYLH----HRFIY-----L-VLIDFEALAFAKQQNFQTE 138 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~p~~~----~~~~~-----~-~~n~~E~~~l~~~~~~~~~ 138 (239)
+..++++.+++. ..+.........+.+...... ++|...+. +.++. + .||.-|++.|++....+..
T Consensus 93 ~~~~~~~a~~iG-pGlg~~~~~~~~~~~~~~~~~~~~vldadal~~~~~~~l~~~~~~~IlTPH~gE~~rL~~~~~~~~~ 171 (278)
T d2ax3a1 93 ELSKDVDVVAIG-PGLGNNEHVREFVNEFLKTLEKPAVIDADAINVLDTSVLKERKSPAVLTPHPGEMARLVKKTVGDVK 171 (278)
T ss_dssp HHHHTCSEEEEC-TTCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCCHHHHHTCSSCEEECCCHHHHHHHHTCCHHHHT
T ss_pred HhcccCCEEEec-CCcccchHHHHHHHHHHhccchheecchhhhhhhhhhhhhhcCCCEEeCCCHhHHHHHhhcccchhh
Confidence 455688999883 233334433333333333333 45542111 23322 2 8999999999985322223
Q ss_pred CHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHH
Q psy6977 139 DLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVC 218 (239)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a 218 (239)
+..+.++.+.++. + .+|+--|..-. +.++++.+..+. .. ....+.|.||...|.+..-+.++.++.+|
T Consensus 172 ~~~~~a~~~a~~~-----~--~~vvlKG~~t~-i~~~~~~~~~~~-g~---~~la~~GtGDvLaGiIaallAq~~~~~~A 239 (278)
T d2ax3a1 172 YNYELAEEFAKEN-----D--CVLVLKSATTI-VTDGEKTLFNIT-GN---TGLSKGGSGDVLTGMIAGFIAQGLSPLEA 239 (278)
T ss_dssp TCHHHHHHHHHHH-----T--SEEEECSSSEE-EECSSCEEEECC-CC----CCSSTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred hHHHHHHHHHHHc-----C--CcEEecCcccc-ccCcccceeecC-CC---CccccccchhHHHHHHHHHHHcCCCHHHH
Confidence 3345566665542 3 34444455443 345555554443 32 45678999999998888888999999999
Q ss_pred HHHHHHHHH
Q psy6977 219 IECGVWAAQ 227 (239)
Q Consensus 219 ~~~a~~~a~ 227 (239)
...|+..-+
T Consensus 240 ~~~a~~lhg 248 (278)
T d2ax3a1 240 STVSVYLHG 248 (278)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998865433
|
| >d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein YxkO species: Bacillus subtilis [TaxId: 1423]
Probab=97.43 E-value=0.00013 Score=55.99 Aligned_cols=139 Identities=15% Similarity=0.118 Sum_probs=86.8
Q ss_pred cccceeEEEEeccccccChHHHHHHHHHhhhCC---CCChhhHH----HHh--hHH-hcCHHHHHHHHHHcCC-CccCHH
Q psy6977 73 LIQNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNINYLH----HRF--IYL-VLIDFEALAFAKQQNF-QTEDLH 141 (239)
Q Consensus 73 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~p~~~----~~~--~~~-~~n~~E~~~l~~~~~~-~~~~~~ 141 (239)
..++.+.+++. ..+..+ +...++++...+.. ++|...+. ... +.+ .||.-|++.|++.... ...+..
T Consensus 91 ~~~~~~~~~iG-pGlg~~-~~~~~~~~~l~~~~~p~VlDAdal~~~~~~~~~~~~IiTPH~gE~~rL~g~~~~~~~~~~~ 168 (275)
T d1kyha_ 91 LEETYRAIAIG-PGLPQT-ESVQQAVDHVLTADCPVILDAGALAKRTYPKREGPVILTPHPGEFFRMTGVPVNELQKKRA 168 (275)
T ss_dssp CCSCCSEEEEC-TTCCSS-HHHHHHHHHHTTSSSCEEECGGGCCSCCCCCCSSCEEECCCHHHHHHHHCCCHHHHTTSHH
T ss_pred hhhccceEEEe-ccccch-HHHHHHHHHHhhccCceeehhhhhhhhhcccccCceEecccHHHHHHhcCcccchhhccHH
Confidence 34578888883 233333 34445555555444 55551111 111 122 8999999999875221 124556
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIEC 221 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 221 (239)
+.++.+.+. ...+|+--|....+...+++.+ +..... ....+.|.||.+.|.+...+.++.++.+|+..
T Consensus 169 ~~a~~~~~~-------~~~~vllKG~~t~I~~~~g~~~-~~~~g~---~~lat~GsGDvLaGiIa~~lAq~~~~~~Aa~~ 237 (275)
T d1kyha_ 169 EYAKEWAAQ-------LQTVIVLKGNQTVIAFPDGDCW-LNPTGN---GALAKGGTGDTLTGMILGMLCCHEDPKHAVLN 237 (275)
T ss_dssp HHHHHHHHH-------HTSEEEECSTTCEEECTTSCEE-ECCCCC---GGGCSTTHHHHHHHHHHHHHHHCSSHHHHHHH
T ss_pred HHHHHHHHH-------hCCeEEeccCcceEEcCCCcee-ecCCCC---ccccCCccccHHHHHHHHHHHcCCCHHHHHHH
Confidence 677777664 2345565677666654344443 433433 56678999999999999999999999999999
Q ss_pred HHH
Q psy6977 222 GVW 224 (239)
Q Consensus 222 a~~ 224 (239)
|+.
T Consensus 238 a~~ 240 (275)
T d1kyha_ 238 AVY 240 (275)
T ss_dssp HHH
T ss_pred HHH
Confidence 954
|