Psyllid ID: psy7055

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVNTS
Secondary Structure (PSIPRED)
ccccccEEEEEccccccHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEcccEEEEEEHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccEEEEHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHEccc
Coil and Loop (DISEMBL)
msyegtllaysghkdndgtVIAAITSNIWSAFEKngrsafkedSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGMLRAKAEALATYLEAPlkqvvnts
Flexible Loop (DISEMBL)
MSYEGTLLAysghkdndgTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGMLRAKAEALATYleaplkqvvnts
Low Complexity Region (SEG)
MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVNTS
Disordered region (IsUnstruct)
******LLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGMLRAKAEALATYLEAPL*******
Disordered Region (DISOPRED)
**YEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQ*****
Disordered Region (DISEMBL)
MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVNTS
Disordered Region (DISPRO)
***EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVN**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVNTS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
B5X7X4	125	Ragulator complex protein	N/A	N/A	0.931	0.76	0.673	8e-33
Q9JHS3	125	Ragulator complex protein	yes	N/A	0.931	0.76	0.652	3e-32
Q6DEG4	125	Ragulator complex protein	yes	N/A	0.931	0.76	0.652	4e-32
Q63ZJ2	125	Ragulator complex protein	N/A	N/A	0.931	0.76	0.642	6e-32
B5FYY5	125	Ragulator complex protein	no	N/A	0.931	0.76	0.652	8e-32
Q9Y2Q5	125	Ragulator complex protein	yes	N/A	0.931	0.76	0.642	8e-32
Q3T132	125	Ragulator complex protein	yes	N/A	0.931	0.76	0.642	8e-32
Q7ZXB7	125	Ragulator complex protein	N/A	N/A	0.931	0.76	0.642	9e-32
Q9V8I2	125	Ragulator complex protein	yes	N/A	0.960	0.784	0.622	3e-31
Q6DF40	125	Ragulator complex protein	yes	N/A	0.931	0.76	0.631	1e-30

>sp|B5X7X4|LTOR2_SALSA Ragulator complex protein LAMTOR2 OS=Salmo salar GN=lamtor2 PE=2 SV=1

 Score =  138 bits (348), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 64/95 (67%), Positives = 76/95 (80%)

Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIWSA++KNG  AF ED L+ +LM+C  G+VAIT+VA
Sbjct: 28  EGSLLAYSGYGDTDARVTAAIASNIWSAYDKNGHQAFNEDKLKFILMDCMEGRVAITRVA 87

Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKAEAL  YLE PL QV
Sbjct: 88  NLLLCMYAKETVGFGMLKAKAEALVLYLEEPLTQV 122

Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, may activate the TOR signaling cascade in response to amino acids. Adapter protein that may regulate the MAP kinase cascade.
Salmo salar (taxid: 8030)

>sp|Q9JHS3|LTOR2_MOUSE Ragulator complex protein LAMTOR2 OS=Mus musculus GN=Lamtor2 PE=1 SV=1

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 77/95 (81%)

Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF EDSL+ +LM+C  G+VAIT+VA
Sbjct: 28  EGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAITRVA 87

Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 88  NLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, recruits the Rag GTPases and the mTORC1 complex to lysosomes, a key step in activation of the TOR signaling cascade by amino acids. Adapter protein that enhances the efficiency of the MAP kinase cascade facilitating the activation of MAPK2.

Mus musculus (taxid: 10090)

>sp|Q6DEG4|LTOR2_DANRE Ragulator complex protein LAMTOR2 OS=Danio rerio GN=lamtor2 PE=2 SV=1

 Score =  136 bits (342), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 75/95 (78%)

Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LL YSG+ D D  V AAI SNIW+A++KNG  AF ED L+ +LM+C  G+VAIT+VA
Sbjct: 28  EGSLLTYSGYGDTDARVTAAIASNIWAAYDKNGHQAFNEDKLKFILMDCMEGRVAITRVA 87

Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKAEAL  YLE PL QV
Sbjct: 88  NLLLCMYAKETVGFGMLKAKAEALVQYLEEPLTQV 122

Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, may activate the TOR signaling cascade in response to amino acids. Adapter protein that may regulate the MAP kinase cascade.

Danio rerio (taxid: 7955)

>sp|Q63ZJ2|LTR2A_XENLA Ragulator complex protein LAMTOR2-A OS=Xenopus laevis GN=lamtor2-a PE=2 SV=1

 Score =  135 bits (341), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 78/95 (82%)

Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A++KNG  AF ED+L+++LM+C  G+VAIT+V+
Sbjct: 28  EGSLLAYSGYGDTDARVTAAIASNIWAAYDKNGHQAFNEDNLKLILMDCMEGRVAITRVS 87

Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 88  NLLLCMYAKETVGFGMLKAKAQALVYYLEEPLNQV 122

Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, may activate the TOR signaling cascade in response to amino acids. Adapter protein that may regulate the MAP kinase cascade.

Xenopus laevis (taxid: 8355)

>sp|B5FYY5|LTOR2_TAEGU Ragulator complex protein LAMTOR2 OS=Taeniopygia guttata GN=LAMTOR2 PE=2 SV=1

 Score =  135 bits (340), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 76/95 (80%)

Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW A++KNG  AF ED+L+ +LM+C  G+VAIT+VA
Sbjct: 28  EGSLLAYSGYGDTDARVTAAIASNIWVAYDKNGHQAFNEDNLKFILMDCMEGRVAITRVA 87

Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 88  NLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, may activate the TOR signaling cascade in response to amino acids. Adapter protein that may regulate the MAP kinase cascade.

Taeniopygia guttata (taxid: 59729)

>sp|Q9Y2Q5|LTOR2_HUMAN Ragulator complex protein LAMTOR2 OS=Homo sapiens GN=LAMTOR2 PE=1 SV=1

 Score =  135 bits (340), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 77/95 (81%)

Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF ED+L+ +LM+C  G+VAIT+VA
Sbjct: 28  EGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDNLKFILMDCMEGRVAITRVA 87

Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 88  NLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, recruits the Rag GTPases and the mTORC1 complex to lysosomes, a key step in activation of the TOR signaling cascade by amino acids. Adapter protein that enhances the efficiency of the MAP kinase cascade facilitating the activation of MAPK2.

Homo sapiens (taxid: 9606)

>sp|Q3T132|LTOR2_BOVIN Ragulator complex protein LAMTOR2 OS=Bos taurus GN=LAMTOR2 PE=2 SV=1

 Score =  135 bits (340), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 77/95 (81%)

Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF ED+L+ +LM+C  G+VAIT+VA
Sbjct: 28  EGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDNLKFILMDCMEGRVAITRVA 87

Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 88  NLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, recruits the Rag GTPases and the mTORC1 complex to lysosomes, a key step in activation of the TOR signaling cascade by amino acids. Adapter protein that enhances the efficiency of the MAP kinase cascade facilitating the activation of MAPK2.

Bos taurus (taxid: 9913)

>sp|Q7ZXB7|LTR2B_XENLA Ragulator complex protein LAMTOR2-B OS=Xenopus laevis GN=lamtor2-b PE=2 SV=1

 Score =  135 bits (339), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 77/95 (81%)

Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A++KNG  AF ED+L+ +LM+C  G+VAIT+V+
Sbjct: 28  EGSLLAYSGYGDTDARVTAAIASNIWAAYDKNGHQAFNEDNLKFILMDCMEGRVAITRVS 87

Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 88  NLLLCMYAKETVGFGMLKAKAQALVHYLEEPLNQV 122

Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex may, activate the TOR signaling cascade in response to amino acids. Adapter protein that may regulate the MAP kinase cascade.

Xenopus laevis (taxid: 8355)

>sp|Q9V8I2|LTOR2_DROME Ragulator complex protein LAMTOR2 homolog OS=Drosophila melanogaster GN=CG5189 PE=2 SV=1

 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 61/98 (62%), Positives = 78/98 (79%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           +S EG LLAYSG+ D D  + AAI SNIW+A+EK+GR+AF+E  L  VL++C NG VAIT
Sbjct: 25  LSQEGALLAYSGYGDKDARITAAIASNIWAAYEKHGRNAFREGRLTFVLIDCENGHVAIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           QVA+VLLCLYAK+ V  G+L+ KA +LA+YLE PLKQ+
Sbjct: 85  QVASVLLCLYAKQTVGLGLLKQKAMSLASYLERPLKQI 122

Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, may activate the TOR signaling cascade in response to amino acids.

Drosophila melanogaster (taxid: 7227)

>sp|Q6DF40|LTOR2_XENTR Ragulator complex protein LAMTOR2 OS=Xenopus tropicalis GN=lamtor2 PE=2 SV=1

 Score =  131 bits (329), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 60/95 (63%), Positives = 76/95 (80%)

Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A++KNG  AF ED+L+ +LM+C  G+VAIT+V+
Sbjct: 28  EGSLLAYSGYGDTDARVTAAIASNIWAAYDKNGHQAFNEDNLKFILMDCMEGRVAITRVS 87

Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE  L QV
Sbjct: 88  NLLLCMYAKETVGFGMLKAKAQALVYYLEESLNQV 122

Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, may activate the TOR signaling cascade in response to amino acids. Adapter protein that may regulate the MAP kinase cascade.

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
383848101	126	PREDICTED: ragulator complex protein LAM	0.980	0.793	0.69	2e-34
380029004	126	PREDICTED: ragulator complex protein LAM	0.980	0.793	0.68	4e-34
340720795	126	PREDICTED: ragulator complex protein LAM	0.980	0.793	0.69	6e-34
332020762	126	Mitogen-activated protein-binding protei	0.980	0.793	0.68	1e-33
91088435	125	PREDICTED: similar to mitogen-activated	0.990	0.808	0.673	1e-33
156554912	126	PREDICTED: ragulator complex protein LAM	0.960	0.777	0.673	6e-33
307176329	126	Mitogen-activated protein-binding protei	0.980	0.793	0.67	7e-33
443713106	128	hypothetical protein CAPTEDRAFT_162993 [	0.990	0.789	0.663	9e-33
170050958	125	mitogen-activated protein-binding protei	0.990	0.808	0.623	1e-32
307205440	126	Mitogen-activated protein-binding protei	0.960	0.777	0.673	1e-32

>gi|383848101|ref|XP_003699690.1| PREDICTED: ragulator complex protein LAMTOR2 homolog [Megachile rotundata]

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 84/100 (84%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ +G LLAYSG+ D D  V AAITSNIWSA+EKNGR+AFKED LQ VLM+C++GKV IT
Sbjct: 25  LNRDGGLLAYSGYGDKDARVTAAITSNIWSAYEKNGRNAFKEDELQFVLMDCADGKVVIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVN 100
           +VAN+LLCLYAKENV FG+LR KA+ALA YL+ PLK + N
Sbjct: 85  EVANLLLCLYAKENVGFGLLREKAQALARYLDQPLKIIAN 124

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380029004|ref|XP_003698173.1| PREDICTED: ragulator complex protein LAMTOR2-like [Apis florea]

 Score =  148 bits (374), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/100 (68%), Positives = 83/100 (83%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ +G LLAYSG+ D D  V AAITSNIWSA+EKNGR+AFKED LQ +LM+C+ GKV IT
Sbjct: 25  LNRDGGLLAYSGYGDKDARVTAAITSNIWSAYEKNGRNAFKEDELQFILMDCAEGKVVIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVN 100
           +VAN+LLCLYAKENV FG+LR KA+ALA YL+ PLK + N
Sbjct: 85  EVANLLLCLYAKENVGFGLLREKAQALARYLDKPLKTIAN 124

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720795|ref|XP_003398815.1| PREDICTED: ragulator complex protein LAMTOR2-like [Bombus terrestris] gi|350398083|ref|XP_003485082.1| PREDICTED: ragulator complex protein LAMTOR2-like [Bombus impatiens]

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 82/100 (82%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ +G LLAYSG+ D D  V AAITSNIWSA+EKNGR+AFKED LQ VLM+C  GKV IT
Sbjct: 25  LNRDGGLLAYSGYGDKDARVTAAITSNIWSAYEKNGRNAFKEDELQFVLMDCVEGKVVIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVN 100
           +VAN+LLCLYAKENV FG+LR KA+ALA YL+ PLK + N
Sbjct: 85  EVANLLLCLYAKENVGFGLLREKAQALARYLDQPLKTIAN 124

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020762|gb|EGI61166.1| Mitogen-activated protein-binding protein-interacting protein [Acromyrmex echinatior]

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/100 (68%), Positives = 82/100 (82%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ +G LLAYSG+ D D  V AAITSNIW+A+EKNGR+AFKED LQ VLM+C  GKV IT
Sbjct: 25  LNRDGGLLAYSGYGDKDARVTAAITSNIWTAYEKNGRNAFKEDELQFVLMDCMEGKVVIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVN 100
           +VAN+LLCLYAKENV FG+LR KA+ALA YL+ PLK + N
Sbjct: 85  EVANLLLCLYAKENVGFGLLREKAQALAKYLDQPLKTIAN 124

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91088435|ref|XP_967919.1| PREDICTED: similar to mitogen-activated protein-binding protein-interacting protein [Tribolium castaneum] gi|270011751|gb|EFA08199.1| hypothetical protein TcasGA2_TC005826 [Tribolium castaneum]

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 83/101 (82%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ EG LLAYSG+ D D  V AAI SNIWSA+EKNGR+AF+E+  QMVL+EC++G++AIT
Sbjct: 25  LNQEGALLAYSGYGDRDARVTAAIASNIWSAYEKNGRNAFREEHPQMVLIECTDGRIAIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVNT 101
           QVAN+LLCLYAK NV FGML+ KA ALA YLE PLKQV  +
Sbjct: 85  QVANLLLCLYAKNNVGFGMLKEKANALAIYLENPLKQVATS 125

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156554912|ref|XP_001605487.1| PREDICTED: ragulator complex protein LAMTOR2 homolog [Nasonia vitripennis]

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 82/98 (83%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ +G LLAYSG+ D D  V AAITSNIWSA+EKNGR+AFKED L+ VLMEC+ GKV IT
Sbjct: 25  LNRDGGLLAYSGYGDKDARVTAAITSNIWSAYEKNGRNAFKEDELKFVLMECAEGKVVIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           +VAN+LLCLYA++NV FG+LR KA+ALA YL+ PLK +
Sbjct: 85  EVANLLLCLYARQNVGFGLLREKAQALAKYLDKPLKTI 122

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307176329|gb|EFN65947.1| Mitogen-activated protein-binding protein-interacting protein [Camponotus floridanus]

 Score =  144 bits (363), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 81/100 (81%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ +G LLAYSG+ D D  V AAITSNIW+A+EKNGR+AFKED L  VLM+C  GKV IT
Sbjct: 25  LNRDGGLLAYSGYGDKDARVTAAITSNIWTAYEKNGRNAFKEDELHYVLMDCMEGKVVIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVN 100
           +VAN+LLCLYAKENV FG+LR KA+ALA YL+ PLK + N
Sbjct: 85  EVANLLLCLYAKENVGFGLLREKAQALARYLDQPLKTIAN 124

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443713106|gb|ELU06112.1| hypothetical protein CAPTEDRAFT_162993 [Capitella teleta]

 Score =  144 bits (362), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 67/101 (66%), Positives = 82/101 (81%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ EG LLA+SG+ D D  V AAI SNIWSAFEKNG++AF ED LQ+VLM+C +GKVAIT
Sbjct: 28  LNNEGALLAFSGYGDKDARVTAAIASNIWSAFEKNGKAAFNEDELQLVLMDCEDGKVAIT 87

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVNT 101
           +VAN+LLC+YAKENV  GMLRAKA+ALA YL  PL  V ++
Sbjct: 88  RVANLLLCIYAKENVGLGMLRAKAKALAEYLHEPLTHVASS 128

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|170050958|ref|XP_001861546.1| mitogen-activated protein-binding protein-interacting protein [Culex quinquefasciatus] gi|167872423|gb|EDS35806.1| mitogen-activated protein-binding protein-interacting protein [Culex quinquefasciatus]

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 81/101 (80%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           +++EG LLA+SG+ D D T+ AAI SNIWSA+EKNGR AF+ED LQ V ++C  G V IT
Sbjct: 25  LTHEGALLAFSGYGDRDATITAAIASNIWSAYEKNGRQAFREDRLQFVFLQCEGGNVIIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVNT 101
           QVAN+LLCLYA+ENV  G+L+ KA+ALATYLE PLK++  +
Sbjct: 85  QVANLLLCLYARENVGLGILKEKAKALATYLEGPLKEIATS 125

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205440|gb|EFN83772.1| Mitogen-activated protein-binding protein-interacting protein [Harpegnathos saltator]

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 80/98 (81%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ +G LLAYSG+ D D  V AAITSNIW+ +EKNGR+AFKED LQ VLM+C  GKV IT
Sbjct: 25  LNRDGGLLAYSGYGDKDARVTAAITSNIWTVYEKNGRNAFKEDELQFVLMDCMEGKVVIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           +VAN+LLCLYAKENV FG+LR KA+ALA YL+ PLK +
Sbjct: 85  EVANLLLCLYAKENVGFGLLREKAQALAQYLDQPLKTI 122

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
UNIPROTKB|B5X7X4	125	lamtor2 "Ragulator complex pro	0.960	0.784	0.653	2.3e-30
MGI|MGI:1932697	125	Lamtor2 "late endosomal/lysoso	0.960	0.784	0.632	7.9e-30
RGD|1562501	125	Lamtor2 "late endosomal/lysoso	0.960	0.784	0.632	7.9e-30
UNIPROTKB|Q63ZJ2	125	lamtor2-a "Ragulator complex p	0.960	0.784	0.622	1e-29
ZFIN|ZDB-GENE-040801-63	125	lamtor2 "late endosomal/lysoso	0.960	0.784	0.632	1.3e-29
UNIPROTKB|Q3T132	125	LAMTOR2 "Ragulator complex pro	0.960	0.784	0.622	1.6e-29
UNIPROTKB|Q9Y2Q5	125	LAMTOR2 "Ragulator complex pro	0.960	0.784	0.622	1.6e-29
UNIPROTKB|F2Z518	125	LAMTOR2 "Uncharacterized prote	0.960	0.784	0.622	1.6e-29
UNIPROTKB|B5FYY5	125	LAMTOR2 "Ragulator complex pro	0.960	0.784	0.632	1.6e-29
UNIPROTKB|Q7ZXB7	125	lamtor2-b "Ragulator complex p	0.960	0.784	0.622	1.6e-29

UNIPROTKB|B5X7X4 lamtor2 "Ragulator complex protein LAMTOR2" [Salmo salar (taxid:8030)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 64/98 (65%), Positives = 78/98 (79%)

Query:     1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
             ++ EG+LLAYSG+ D D  V AAI SNIWSA++KNG  AF ED L+ +LM+C  G+VAIT
Sbjct:    25 LNNEGSLLAYSGYGDTDARVTAAIASNIWSAYDKNGHQAFNEDKLKFILMDCMEGRVAIT 84

Query:    61 QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
             +VAN+LLC+YAKE V FGML+AKAEAL  YLE PL QV
Sbjct:    85 RVANLLLCMYAKETVGFGMLKAKAEALVLYLEEPLTQV 122

GO:0005770 "late endosome" evidence=ISS

GO:0016049 "cell growth" evidence=ISS

GO:0032008 "positive regulation of TOR signaling cascade" evidence=ISS

GO:0034613 "cellular protein localization" evidence=ISS

GO:0071230 "cellular response to amino acid stimulus" evidence=ISS

GO:0071986 "Ragulator complex" evidence=ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0032947 "protein complex scaffold" evidence=ISS

MGI|MGI:1932697 Lamtor2 "late endosomal/lysosomal adaptor, MAPK and MTOR activator 2" [Mus musculus (taxid:10090)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/98 (63%), Positives = 79/98 (80%)

Query:     1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
             ++ EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF EDSL+ +LM+C  G+VAIT
Sbjct:    25 LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAIT 84

Query:    61 QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
             +VAN+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct:    85 RVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

GO:0000186 "activation of MAPKK activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005764 "lysosome" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005770 "late endosome" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016049 "cell growth" evidence=ISO

GO:0032008 "positive regulation of TOR signaling cascade" evidence=ISO

GO:0034613 "cellular protein localization" evidence=ISO

GO:0071230 "cellular response to amino acid stimulus" evidence=ISO

GO:0071986 "Ragulator complex" evidence=ISO

RGD|1562501 Lamtor2 "late endosomal/lysosomal adaptor, MAPK and MTOR activator 2" [Rattus norvegicus (taxid:10116)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 62/98 (63%), Positives = 79/98 (80%)

Query:     1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
             ++ EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF EDSL+ +LM+C  G+VAIT
Sbjct:    25 LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAIT 84

Query:    61 QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
             +VAN+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct:    85 RVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

GO:0000186 "activation of MAPKK activity" evidence=IEA;ISO

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA;ISO

GO:0005770 "late endosome" evidence=ISO

GO:0016049 "cell growth" evidence=IEA;ISO

GO:0032008 "positive regulation of TOR signaling cascade" evidence=IEA;ISO

GO:0032947 "protein complex scaffold" evidence=IEA;ISO

GO:0034613 "cellular protein localization" evidence=IEA;ISO

GO:0071230 "cellular response to amino acid stimulus" evidence=IEA;ISO

GO:0071986 "Ragulator complex" evidence=IEA;ISO

UNIPROTKB|Q63ZJ2 lamtor2-a "Ragulator complex protein LAMTOR2-A" [Xenopus laevis (taxid:8355)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 61/98 (62%), Positives = 80/98 (81%)

Query:     1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
             ++ EG+LLAYSG+ D D  V AAI SNIW+A++KNG  AF ED+L+++LM+C  G+VAIT
Sbjct:    25 LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDKNGHQAFNEDNLKLILMDCMEGRVAIT 84

Query:    61 QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
             +V+N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct:    85 RVSNLLLCMYAKETVGFGMLKAKAQALVYYLEEPLNQV 122

GO:0005770 "late endosome" evidence=ISS

GO:0016049 "cell growth" evidence=ISS

GO:0032008 "positive regulation of TOR signaling cascade" evidence=ISS

GO:0034613 "cellular protein localization" evidence=ISS

GO:0071230 "cellular response to amino acid stimulus" evidence=ISS

GO:0071986 "Ragulator complex" evidence=ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0032947 "protein complex scaffold" evidence=ISS

ZFIN|ZDB-GENE-040801-63 lamtor2 "late endosomal/lysosomal adaptor, MAPK and MTOR activator 2" [Danio rerio (taxid:7955)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 62/98 (63%), Positives = 77/98 (78%)

Query:     1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
             ++ EG+LL YSG+ D D  V AAI SNIW+A++KNG  AF ED L+ +LM+C  G+VAIT
Sbjct:    25 LNNEGSLLTYSGYGDTDARVTAAIASNIWAAYDKNGHQAFNEDKLKFILMDCMEGRVAIT 84

Query:    61 QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
             +VAN+LLC+YAKE V FGML+AKAEAL  YLE PL QV
Sbjct:    85 RVANLLLCMYAKETVGFGMLKAKAEALVQYLEEPLTQV 122

GO:0016049 "cell growth" evidence=ISS

GO:0032947 "protein complex scaffold" evidence=ISS

GO:0071986 "Ragulator complex" evidence=ISS

GO:0034613 "cellular protein localization" evidence=ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0005770 "late endosome" evidence=ISS

GO:0032008 "positive regulation of TOR signaling cascade" evidence=ISS

GO:0071230 "cellular response to amino acid stimulus" evidence=ISS

GO:0005764 "lysosome" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

UNIPROTKB|Q3T132 LAMTOR2 "Ragulator complex protein LAMTOR2" [Bos taurus (taxid:9913)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 61/98 (62%), Positives = 79/98 (80%)

Query:     1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
             ++ EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF ED+L+ +LM+C  G+VAIT
Sbjct:    25 LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDNLKFILMDCMEGRVAIT 84

Query:    61 QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
             +VAN+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct:    85 RVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

GO:0032947 "protein complex scaffold" evidence=ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0005770 "late endosome" evidence=ISS

GO:0071230 "cellular response to amino acid stimulus" evidence=ISS

GO:0034613 "cellular protein localization" evidence=ISS

GO:0016049 "cell growth" evidence=ISS

GO:0032008 "positive regulation of TOR signaling cascade" evidence=ISS

GO:0071986 "Ragulator complex" evidence=ISS

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0000186 "activation of MAPKK activity" evidence=IEA

UNIPROTKB|Q9Y2Q5 LAMTOR2 "Ragulator complex protein LAMTOR2" [Homo sapiens (taxid:9606)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 61/98 (62%), Positives = 79/98 (80%)

Query:     1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
             ++ EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF ED+L+ +LM+C  G+VAIT
Sbjct:    25 LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDNLKFILMDCMEGRVAIT 84

Query:    61 QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
             +VAN+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct:    85 RVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

GO:0000186 "activation of MAPKK activity" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0071230 "cellular response to amino acid stimulus" evidence=IMP

GO:0005770 "late endosome" evidence=ISS

GO:0071986 "Ragulator complex" evidence=IDA

GO:0034613 "cellular protein localization" evidence=IMP

GO:0032008 "positive regulation of TOR signaling cascade" evidence=IMP

GO:0016049 "cell growth" evidence=IMP

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IDA

GO:0032947 "protein complex scaffold" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F2Z518 LAMTOR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 61/98 (62%), Positives = 79/98 (80%)

Query:     1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
             ++ EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF ED+L+ +LM+C  G+VAIT
Sbjct:    25 LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDNLKFILMDCMEGRVAIT 84

Query:    61 QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
             +VAN+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct:    85 RVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

GO:0071986 "Ragulator complex" evidence=IEA

GO:0071230 "cellular response to amino acid stimulus" evidence=IEA

GO:0034613 "cellular protein localization" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0032008 "positive regulation of TOR signaling cascade" evidence=IEA

GO:0016049 "cell growth" evidence=IEA

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0000186 "activation of MAPKK activity" evidence=IEA

UNIPROTKB|B5FYY5 LAMTOR2 "Ragulator complex protein LAMTOR2" [Taeniopygia guttata (taxid:59729)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 62/98 (63%), Positives = 78/98 (79%)

Query:     1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
             ++ EG+LLAYSG+ D D  V AAI SNIW A++KNG  AF ED+L+ +LM+C  G+VAIT
Sbjct:    25 LNNEGSLLAYSGYGDTDARVTAAIASNIWVAYDKNGHQAFNEDNLKFILMDCMEGRVAIT 84

Query:    61 QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
             +VAN+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct:    85 RVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

GO:0005770 "late endosome" evidence=ISS

GO:0016049 "cell growth" evidence=ISS

GO:0032008 "positive regulation of TOR signaling cascade" evidence=ISS

GO:0034613 "cellular protein localization" evidence=ISS

GO:0071230 "cellular response to amino acid stimulus" evidence=ISS

GO:0071986 "Ragulator complex" evidence=ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0032947 "protein complex scaffold" evidence=ISS

UNIPROTKB|Q7ZXB7 lamtor2-b "Ragulator complex protein LAMTOR2-B" [Xenopus laevis (taxid:8355)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 61/98 (62%), Positives = 79/98 (80%)

Query:     1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
             ++ EG+LLAYSG+ D D  V AAI SNIW+A++KNG  AF ED+L+ +LM+C  G+VAIT
Sbjct:    25 LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDKNGHQAFNEDNLKFILMDCMEGRVAIT 84

Query:    61 QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
             +V+N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct:    85 RVSNLLLCMYAKETVGFGMLKAKAQALVHYLEEPLNQV 122

GO:0005770 "late endosome" evidence=ISS

GO:0016049 "cell growth" evidence=ISS

GO:0032008 "positive regulation of TOR signaling cascade" evidence=ISS

GO:0034613 "cellular protein localization" evidence=ISS

GO:0071230 "cellular response to amino acid stimulus" evidence=ISS

GO:0071986 "Ragulator complex" evidence=ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0032947 "protein complex scaffold" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3T132	LTOR2_BOVIN	No assigned EC number	0.6421	0.9313	0.76	yes	N/A
Q9N2U6	LTOR2_CAEEL	No assigned EC number	0.3473	0.8431	0.6935	yes	N/A
Q9V8I2	LTOR2_DROME	No assigned EC number	0.6224	0.9607	0.784	yes	N/A
Q6DEG4	LTOR2_DANRE	No assigned EC number	0.6526	0.9313	0.76	yes	N/A
Q6DF40	LTOR2_XENTR	No assigned EC number	0.6315	0.9313	0.76	yes	N/A
Q9JHS3	LTOR2_MOUSE	No assigned EC number	0.6526	0.9313	0.76	yes	N/A
Q9Y2Q5	LTOR2_HUMAN	No assigned EC number	0.6421	0.9313	0.76	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	102
smart00960	88	smart00960, Robl_LC7, Roadblock/LC7 domain	5e-08
pfam03259	91	pfam03259, Robl_LC7, Roadblock/LC7 domain	3e-06

>gnl|CDD|214939 smart00960, Robl_LC7, Roadblock/LC7 domain

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 1  MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
          +S +G LLA SG  D+D   +AA+ + + S  E+  R    E  L+ + +E   G+V IT
Sbjct: 20 VSRDGLLLASSGLSDDDAERLAALAAGLLSLAERAAR-ELGEGELRQLRIEGEKGEVLIT 78

Query: 61 QVANVLLCL 69
             + LL +
Sbjct: 79 PAGDALLAV 87

This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role. Length = 88

>gnl|CDD|217460 pfam03259, Robl_LC7, Roadblock/LC7 domain

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 4  EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
          +G +LA +G  D+D   +AA+ S + SA +   R       L+ +L+E   G++ +T   
Sbjct: 24 DGLVLASTGLDDDDADRLAALASGLLSAAKALAR-DLGGGELRQLLIEGKKGELYLTPAG 82

Query: 64 N-VLLCLYA 71
             LL + A
Sbjct: 83 EGALLVVLA 91

This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role. Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
KOG4107|consensus	125		100.0
COG2018	119	Uncharacterized distant relative of homeotic prote	99.44
PF03259	91	Robl_LC7: Roadblock/LC7 domain; InterPro: IPR00494	99.13
PF08923	119	MAPKK1_Int: Mitogen-activated protein kinase kinas	97.19
PF00235	121	Profilin: Profilin; InterPro: IPR002097 Profilin i	89.12
KOG1755|consensus	128		85.65

>KOG4107|consensus

Probab=100.00  E-value=6.7e-44  Score=248.46  Aligned_cols=101  Identities=56%  Similarity=0.930  Sum_probs=99.6

Q ss_pred             CCCcccEEEeecCCCCchhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecceeeeeeeecCccccch
Q psy7055           1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGML   80 (102)
Q Consensus         1 ~~~eG~LlA~s~~~d~~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~~LLcl~a~~~v~~GlL   80 (102)
                      ||+||+||||+|++|+|+||+|||+||||.+|+|+|..+|++|+|++++++||+|+++||+|++||||+|++++|++||+
T Consensus        25 ln~EG~LLAYsGygdkdarvtaAiasniWAAyer~gn~af~e~~Lkf~lldcenG~vaiT~VA~~LLc~yAk~tvglGml  104 (125)
T KOG4107|consen   25 LNKEGLLLAYSGYGDKDARVTAAIASNIWAAYERRGNQAFNEDDLKFTLLDCENGVVAITLVARMLLCVYAKKTVGLGML  104 (125)
T ss_pred             EcCCCcEEEecccCcchhHHHHHHHHHHHHHHHHhccccccccCceeeeeeecCCeeeHHHHHHHHHHHhhhcccchHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhcccccC
Q psy7055          81 RAKAEALATYLEAPLKQVVNT  101 (102)
Q Consensus        81 k~K~~al~~~Le~pL~~i~~~  101 (102)
                      |+|+++|+.|||+||.||++|
T Consensus       105 kaKa~tLa~YLE~Pl~qisas  125 (125)
T KOG4107|consen  105 KAKAHTLAAYLEQPLLQISAS  125 (125)
T ss_pred             HHHHHHHHHHHHhHHHHhcCC
Confidence            999999999999999999976

>COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only]

Probab=99.44  E-value=7.8e-13  Score=93.54  Aligned_cols=92  Identities=20%  Similarity=0.335  Sum_probs=85.1

Q ss_pred             CCcccEEEeecCCCCchhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecc-eeeeeeeecCccccch
Q psy7055           2 SYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVAN-VLLCLYAKENVCFGML   80 (102)
Q Consensus         2 ~~eG~LlA~s~~~d~~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~-~LLcl~a~~~v~~GlL   80 (102)
                      +.||.+++..-+++.|++++||++|.+.++-+|... .|.-++++|++|+.++|+|.+.+++. .+|.+.+.+.+++|++
T Consensus        26 s~DGL~ia~~~p~~~d~e~vaA~~a~~~g~~er~~~-~l~~g~leqi~I~g~~g~i~l~~~g~~~il~~~a~~~~nLGli  104 (119)
T COG2018          26 SKDGLPIAAELPGNVDAEIVAAMAATALGLAERAAD-ELGGGELEQIMIEGKKGKILLYDAGDDAILVVLADEGTNLGLI  104 (119)
T ss_pred             ccCCceEeecCCCcccHHHHHHHHHHHHHHhHHHHH-HhCCCCceEEEEeccccEEEEEEcCCceEEEEEcCCCCcchhh
Confidence            479999999999999999999999999999998764 46778999999999999999999995 9999999999999999


Q ss_pred             HHHHHHHHHHhhhh
Q psy7055          81 RAKAEALATYLEAP   94 (102)
Q Consensus        81 k~K~~al~~~Le~p   94 (102)
                      |..++..++.++.-
T Consensus       105 ~~e~k~aa~~i~~~  118 (119)
T COG2018         105 RMEMKRAAEKIAAL  118 (119)
T ss_pred             hhHHHHHHHHHhhc
Confidence            99999999988753

>PF03259 Robl_LC7: Roadblock/LC7 domain; InterPro: IPR004942 This family includes proteins that are about 100 amino acids long and have been shown to be related []

Probab=99.13  E-value=9.8e-11  Score=75.07  Aligned_cols=70  Identities=31%  Similarity=0.484  Sum_probs=63.0

Q ss_pred             CCCcccEEEeecCCCCchhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecc-eeeeeee
Q psy7055           1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVAN-VLLCLYA   71 (102)
Q Consensus         1 ~~~eG~LlA~s~~~d~~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~-~LLcl~a   71 (102)
                      +|+||.++++...++.+++.+||+++.+|...++.++.. ..++++++++++++|++.|+++++ ++||+++
T Consensus        21 ~~~dG~~i~~~~~~~~~~~~~aa~~a~~~~~~~~~~~~l-~~~~~~~v~i~~~~~~i~i~~~~~~~~L~v~~   91 (91)
T PF03259_consen   21 VDKDGLVIASSGIDDDDAEKLAAMAASLLAAAEKLAKEL-GEGELEQVRIETEKGEIIITPVGDFYLLVVLA   91 (91)
T ss_dssp             EETTSEEEEETSSSHHHHHHHHHHHHHHHHHHHHHHHHH-TTSSEEEEEEEESSEEEEEEECSTCEEEEEEE
T ss_pred             EcCCCCEEEEecCCcccHHHHHHHHHHHHHHHHHHHHHh-CCCCcEEEEEEECCCEEEEEEcCCCEEEEEEC
Confidence            478999999966677899999999999999999988765 488999999999999999999999 9999874

Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions []. This family also includes Golgi-associated MP1 adapter protein (Q9Y2Q5 from SWISSPROT) and MglB from Myxococcus xanthus (Q50883 from SWISSPROT), a protein involved in gliding motility []. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.; PDB: 2B95_B 1Z09_A 2E8J_B 2HZ5_B 3KYE_A 2ZL1_B 1SKO_B 3CPT_B 1VEU_B 1VET_B ....

>PF08923 MAPKK1_Int: Mitogen-activated protein kinase kinase 1 interacting; InterPro: IPR015019 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.19  E-value=0.0042  Score=43.72  Aligned_cols=89  Identities=12%  Similarity=0.156  Sum_probs=67.6

Q ss_pred             CCcccEEEeecCCCC-chhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecceeeeeeeecCccccch
Q psy7055           2 SYEGTLLAYSGHKDN-DGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGML   80 (102)
Q Consensus         2 ~~eG~LlA~s~~~d~-~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~~LLcl~a~~~v~~GlL   80 (102)
                      |+||..|+.++.++. +.+.-+++.+. |.....++. -+.-++.++++.-+++..++......+.+-++|+++.+.|++
T Consensus        24 DrDGvpi~~v~~~~~~~~~~~~~~~~t-f~~a~~Q~~-KL~lG~nk~ii~~Y~~~qvv~~~~~pl~it~ias~~aN~G~i  101 (119)
T PF08923_consen   24 DRDGVPIAKVSSDSAPESAMRPSLLST-FAMAIDQAS-KLGLGKNKSIIAYYDSYQVVQFNKLPLYITFIASSNANTGLI  101 (119)
T ss_dssp             ETTS-EEEEEE-TTS-GGGGSHHHHCC-HHHHHHHHT-TSSS-SEEEEEEEESSEEEEEEEETTEEEEEEEETTS-HHHH
T ss_pred             CCCCcEEEEecCCCCcchhhhhHHHHH-HHHHhhccc-ccCCCCceEEEEEeCCEEEEEEeCCCeEEEEEecCCCCHHHH
Confidence            689999999987764 45555677544 665555543 345678999999999999999999999999999999999998


Q ss_pred             HHHHHHHHHHhh
Q psy7055          81 RAKAEALATYLE   92 (102)
Q Consensus        81 k~K~~al~~~Le   92 (102)
                      +.=-+.|..+|+
T Consensus       102 l~l~~~L~~~l~  113 (119)
T PF08923_consen  102 LSLEEELAPILN  113 (119)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHH
Confidence            887777777763

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents Mitogen-activated protein kinase kinase 1 interacting protein, which is a small subcellular adaptor protein required for MAPK signalling and ERK1/2 activation. The overall topology of this domain has a central five-stranded beta-sheet sandwiched between a two alpha-helix and a one alpha-helix layer []. ; PDB: 1VEU_A 1VET_A 1SKO_A 2ZL1_A 3CPT_A.

>PF00235 Profilin: Profilin; InterPro: IPR002097 Profilin is a small eukaryotic protein that binds to monomeric actin (G-actin) in a 1:1 ratio thus preventing the polymerisation of actin into filaments (F-actin)

Probab=89.12  E-value=2  Score=28.89  Aligned_cols=86  Identities=22%  Similarity=0.283  Sum_probs=50.0

Q ss_pred             CCcccEEEeecCC-CCchhHHHHHH---HHHHHHHHhcCccccccccceeeeeeec---------CceEEeeeecceeee
Q psy7055           2 SYEGTLLAYSGHK-DNDGTVIAAIT---SNIWSAFEKNGRSAFKEDSLQMVLMECS---------NGKVAITQVANVLLC   68 (102)
Q Consensus         2 ~~eG~LlA~s~~~-d~~a~v~AAia---sniW~ay~r~g~~~~~~~~L~~~lie~e---------~Gri~i~~Va~~LLc   68 (102)
                      +.||.+.|+++.- .-...=+..|+   .+- .....+|   +.-+.-+++++-.+         .+-++|.+-...++.
T Consensus        23 ~~dG~vwA~s~~f~~~~~~E~~~i~~~f~~~-~~~~~~g---i~l~G~kY~~~~~d~~~i~~k~~~~G~~i~kt~~~ivI   98 (121)
T PF00235_consen   23 GSDGSVWASSPGFSNISPEEAKAIIKAFNNP-SKFPSNG---ITLGGKKYIVLRADDNSIYGKKGKGGIIIVKTKQAIVI   98 (121)
T ss_dssp             ETTSSEEEEETTGGGCSHHHHHHHHHHHHSS-SHHHHH----EEETTEEEEEEEEETTEEEEEETTEEEEEEECSSEEEE
T ss_pred             cCCCCEEEecCCCCCCCHHHHHHHHHHhcCc-hhcccCC---eEEcCcEeEEEecCCceEEeeCCCCcEEEEECCCEEEE
Confidence            4789999988764 32222222221   111 1122222   22344455555444         344666666665555


Q ss_pred             eeeecCccccchHHHHHHHHHHh
Q psy7055          69 LYAKENVCFGMLRAKAEALATYL   91 (102)
Q Consensus        69 l~a~~~v~~GlLk~K~~al~~~L   91 (102)
                      -+.+++..-|.....++.|++||
T Consensus        99 g~y~~~~~~~~~~~~v~~lA~yL  121 (121)
T PF00235_consen   99 GMYDESIQPGNCNKAVEKLADYL  121 (121)
T ss_dssp             EEEETTSTHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCHHHHHHHHHHHHhhC
Confidence            55666799999999999999998

It can also in certain circumstance promote actin polymerisation. Profilin also binds to polyphosphoinositides such as PIP2. Overall sequence similarity among profilin from organisms which belong to different phyla (ranging from fungi to mammals) is low, but the N-terminal region is relatively well conserved. That region is thought to be involved in the binding to actin. A protein structurally similar to profilin is present in the genome of Variola virus and Vaccinia virus (gene A42R). Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Ara t 8, Bet v 2, Cyn d 12, Hel a 2, Mer a 1 and Phl p 11.; GO: 0003779 actin binding, 0007010 cytoskeleton organization, 0015629 actin cytoskeleton; PDB: 1ACF_A 3NEC_C 2V8F_B 2V8C_A 2VK3_A 2JKF_A 2JKG_A 1F2K_B 2ACG_A 1YPR_B ....

>KOG1755|consensus

Probab=85.65  E-value=6.3  Score=28.37  Aligned_cols=62  Identities=23%  Similarity=0.285  Sum_probs=46.2

Q ss_pred             HHHHHhcCccccccccceeeeeeecC----------ceEEeeeecceeeeeeeecCccccchHHHHHHHHHHhhh
Q psy7055          29 WSAFEKNGRSAFKEDSLQMVLMECSN----------GKVAITQVANVLLCLYAKENVCFGMLRAKAEALATYLEA   93 (102)
Q Consensus        29 W~ay~r~g~~~~~~~~L~~~lie~e~----------Gri~i~~Va~~LLcl~a~~~v~~GlLk~K~~al~~~Le~   93 (102)
                      |...-.+|..   -...++++++.|.          |-+.|+.-...|+..+-++.+.-|..+.+.+.|++||.+
T Consensus        54 ~~~~~~~Gl~---L~Gqkylv~~ge~~~~~~gk~~~~gv~i~kT~~~li~~~y~e~v~~g~~~k~ve~LadYL~~  125 (128)
T KOG1755|consen   54 PGGLAGTGLT---LGGQKYLVVRGEEGRVIRGKEGTGGVTIKKTGQALIFSIYKEGVQPGQCNKVVESLADYLRE  125 (128)
T ss_pred             ccccccccee---ecccEEEEEecccceEEecccCCCcEEEEEcceEEEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence            4444444432   3566789999883          445566666677788888899999999999999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	102
1sko_B	130	Mp1-P14 Complex Length = 130		2e-33
1vet_B	125	Crystal Structure Of P14MP1 AT 1.9 A RESOLUTION Len		2e-33
2zl1_B	131	Mp1-P14 Scaffolding Complex Length = 131		2e-33
1szv_A	130	Structure Of The Adaptor Protein P14 Reveals A Prof		2e-33
3cpt_B	131	Mp1-P14 Scaffolding Complex Length = 131		9e-33
1veu_B	126	Crystal Structure Of The P14MP1 COMPLEX AT 2.15 A R		1e-31

>pdb|1SKO|B Chain B, Mp1-P14 Complex Length = 130

Iteration: 1
 Score =  137 bits (344), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 77/95 (81%)
Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF EDSL+ +LM+C  G+VAIT+VA
Sbjct: 34  EGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAITRVA 93
Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 94  NLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 128

>pdb|1VET|B Chain B, Crystal Structure Of P14MP1 AT 1.9 A RESOLUTION Length = 125

Iteration: 1
 Score =  137 bits (344), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 77/95 (81%)
Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF EDSL+ +LM+C  G+VAIT+VA
Sbjct: 28  EGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAITRVA 87
Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 88  NLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 122

>pdb|2ZL1|B Chain B, Mp1-P14 Scaffolding Complex Length = 131

Iteration: 1
 Score =  137 bits (344), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 77/95 (81%)
Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF EDSL+ +LM+C  G+VAIT+VA
Sbjct: 34  EGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAITRVA 93
Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 94  NLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 128

>pdb|1SZV|A Chain A, Structure Of The Adaptor Protein P14 Reveals A Profilin- Like Fold With Novel Function Length = 130

Iteration: 1
 Score =  137 bits (344), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 77/95 (81%)
Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF EDSL+ +LM+C  G+VAIT+VA
Sbjct: 33  EGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAITRVA 92
Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 93  NLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 127

>pdb|3CPT|B Chain B, Mp1-P14 Scaffolding Complex Length = 131

Iteration: 1
 Score =  134 bits (338), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 76/95 (80%)
Query: 4   EGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVA 63
           EG+LLAYSG+ D D  V AAI SNIW+A ++NG  AF EDSL+ +LM+C  G+VAIT+VA
Sbjct: 34  EGSLLAYSGYGDTDARVTAAIASNIWAAADRNGNQAFNEDSLKFILMDCMEGRVAITRVA 93
Query: 64  NVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           N+LLC+YAKE V FGML+AKA+AL  YLE PL QV
Sbjct: 94  NLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQV 128

>pdb|1VEU|B Chain B, Crystal Structure Of The P14MP1 COMPLEX AT 2.15 A Resolution Length = 126

Iteration: 1
 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF EDSL+ +L +C  G+VAIT
Sbjct: 26  LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILXDCXEGRVAIT 85
Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQV 98
           +VAN+LLC YAKE V FG L+AKA+AL  YLE PL QV
Sbjct: 86  RVANLLLCXYAKETVGFGXLKAKAQALVQYLEEPLTQV 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	102
1vet_B	125	P14, late endosomal/lysosomal MP1 interacting prot	1e-36

>1vet_B P14, late endosomal/lysosomal MP1 interacting protein; profilin, scaffold, adaptor, signaling protein/protein binding complex; 1.90A {Mus musculus} SCOP: d.110.7.1 PDB: 2zl1_B 1veu_B 1szv_A 1sko_B 3cpt_B Length = 125

 Score =  119 bits (299), Expect = 1e-36
 Identities = 62/101 (61%), Positives = 80/101 (79%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF EDSL+ +LM+C  G+VAIT
Sbjct: 25  LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAPLKQVVNT 101
           +VAN+LLC+YAKE V FGML+AKA+AL  YLE PL QV  +
Sbjct: 85  RVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQVAAS 125

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	102
1vet_B	125	P14, late endosomal/lysosomal MP1 interacting prot	99.94
3leq_A	126	Uncharacterized protein CVNB5; PSI, MCSG, structur	99.59
3t12_B	136	Gliding protein MGLB; G-domain containing protein,	99.28
1j3w_A	163	Giding PROTEIN-MGLB; gliding, motility, mutational	99.27
3kye_A	150	Roadblock/LC7 domain, ROBL_LC7; alpga-beta-alpha s	99.11
3cpt_A	143	Mitogen-activated protein kinase kinase 1- interac	95.14
4ftx_A	170	Protein SLM4; EGO complex, EGO3, TOR signaling, pr	94.36
3lgo_A	172	Protein SLM4; roadblock/LC7, domain SWAP, autophag	92.6
3nul_A	130	Profilin I; cytoskeleton, actin binding protein; H	86.22
3d9y_A	127	Profilin; yeast, actin-binding, cytoskeleton, prot	82.68
1acf_A	125	Profilin I; protein binding, actin-binding protein	80.53

>1vet_B P14, late endosomal/lysosomal MP1 interacting protein; profilin, scaffold, adaptor, signaling protein/protein binding complex; 1.90A {Mus musculus} SCOP: d.110.7.1 PDB: 2zl1_B 1veu_B 1szv_A 1sko_B 3cpt_B

Probab=99.94  E-value=1.5e-26  Score=161.55  Aligned_cols=101  Identities=61%  Similarity=1.032  Sum_probs=91.1

Q ss_pred             CCCcccEEEeecCCCCchhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecceeeeeeeecCccccch
Q psy7055           1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGML   80 (102)
Q Consensus         1 ~~~eG~LlA~s~~~d~~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~~LLcl~a~~~v~~GlL   80 (102)
                      ++.||.+||++++++.|++.+|||+|++|+.|++.+.+.|.+++++|+|||+++|++.|+++++.+||+++++++++|++
T Consensus        25 vs~DGllia~s~~~~~dae~laAias~~~sl~~~~~~~~~~~g~~~q~~ve~~~G~l~i~~a~~a~L~Vla~~~a~lGlv  104 (125)
T 1vet_B           25 LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAITRVANLLLCMYAKETVGFGML  104 (125)
T ss_dssp             ECTTCCEEEEEECCSSCHHHHHHHHHHHHHHHHHHHCCTTTCCCCCEEEEEETTEEEEEEEETTEEEEEEECTTSCHHHH
T ss_pred             ECCCCCeEEecCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEEeCCCEEEEEEcCCeEEEEEeCCCCChHHH
Confidence            47899999999998899999999999999999999998899999999999999999999999779999999999999999


Q ss_pred             HHHHHHHHHHhhhhhcccccC
Q psy7055          81 RAKAEALATYLEAPLKQVVNT  101 (102)
Q Consensus        81 k~K~~al~~~Le~pL~~i~~~  101 (102)
                      +.|++.+++||.+|||+|+.|
T Consensus       105 ~~~m~~lv~~L~~~lr~~~~~  125 (125)
T 1vet_B          105 KAKAQALVQYLEEPLTQVAAS  125 (125)
T ss_dssp             HHHHHHHHHHHHCC-------
T ss_pred             HHHHHHHHHHHhhhhhhhccC
Confidence            999999999999999999875

>3leq_A Uncharacterized protein CVNB5; PSI, MCSG, structural genomics, midwest center for structura genomics, protein structure initiative; 1.85A {Streptomyces avermitilis}

Probab=99.59  E-value=3.3e-15  Score=103.76  Aligned_cols=95  Identities=18%  Similarity=0.248  Sum_probs=71.9

Q ss_pred             CCcccEEEeecCCC-CchhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecc-eeeeeeeecCccccc
Q psy7055           2 SYEGTLLAYSGHKD-NDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVAN-VLLCLYAKENVCFGM   79 (102)
Q Consensus         2 ~~eG~LlA~s~~~d-~~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~-~LLcl~a~~~v~~Gl   79 (102)
                      +.||.+|+++...+ .++..+||++|.+|+..++.+.+ |..+.+++++||+++|.+.++++++ .+||+++++++++|+
T Consensus        26 s~DGl~ia~~~~~~~~dae~lAA~~a~l~sl~~~~~~~-~~~G~~~qv~ve~~~G~l~v~~ag~~a~L~vla~~~a~lG~  104 (126)
T 3leq_A           26 SEDGLVVSKSTGFLRDDAERLAATASGLMSLSKGVSMD-FRRGPVRQALIEMGKGYLILTAAGPGAHLVVLTRQGADVGV  104 (126)
T ss_dssp             ETTSCEEEECTTSCHHHHHHHHHHHHHHHHC--------------CEEEEECSSCEEEEEESSTTEEEEEEECTTCCHHH
T ss_pred             cCCCcEEEeeCCCCcccHHHHHHHHHHHHHHHHHHHHH-hCCCCeEEEEEEeCCCEEEEEEeCCCcEEEEEeCCCCCHHH
Confidence            57999999998766 58999999999999999999876 6889999999999999999999996 999999999999999


Q ss_pred             hHHHHHHHHHHhhhhhcc
Q psy7055          80 LRAKAEALATYLEAPLKQ   97 (102)
Q Consensus        80 Lk~K~~al~~~Le~pL~~   97 (102)
                      ++.+++.+++.+.+-|..
T Consensus       105 v~~em~~~v~ri~~~L~~  122 (126)
T 3leq_A          105 VAYQMNMLVKKIGEHLSA  122 (126)
T ss_dssp             HHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHHhcCC
Confidence            999999999888776653

>3t12_B Gliding protein MGLB; G-domain containing protein, bacterial polarity, motility, homodimeric GAP protein, POLE localisation; HET: GDP; 2.20A {Thermus thermophilus} PDB: 3t1q_B*

Probab=99.28  E-value=1.5e-11  Score=87.05  Aligned_cols=96  Identities=18%  Similarity=0.168  Sum_probs=85.9

Q ss_pred             CCcccEEEeecC----CCCchhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecc-eeeeeeeecCcc
Q psy7055           2 SYEGTLLAYSGH----KDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVAN-VLLCLYAKENVC   76 (102)
Q Consensus         2 ~~eG~LlA~s~~----~d~~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~-~LLcl~a~~~v~   76 (102)
                      +.+|.+|++.+.    ++-|...+||+++....+.++-++. +.+++++++++|.++|.+.+.+|+. ++|.++.+++++
T Consensus        33 d~dG~vIa~~~~~~~~~~~d~~~lAAl~A~~~~a~~~la~~-Lge~~~~~l~~eGe~~~i~i~~vg~~~iLvvifd~~~~  111 (136)
T 3t12_B           33 DRKGFVLAHKEALWAPKPPPLDTLATLVASNAAATQALAKL-LGEARFQEEVHQGERMGLYVDEAGEHALLVLVFDETAP  111 (136)
T ss_dssp             ETTC-CCEEEECTTSCCCSCHHHHHHHHHHHHHHHHHHHHH-TTCSCCCCEEEECSSCEEEEEESSTTEEEEEEECTTSC
T ss_pred             cCCCCEEEEeccccCCCCCcHHHHHHHHHHHHHHHHHHHHH-HCCCchhHheEEcCcCCEEEEEcCCCEEEEEEeCCCCC
Confidence            579999999985    4569999999999999999998877 4667899999999999999999986 999999999999


Q ss_pred             ccchHHHHHHHHHHhhhhhccc
Q psy7055          77 FGMLRAKAEALATYLEAPLKQV   98 (102)
Q Consensus        77 ~GlLk~K~~al~~~Le~pL~~i   98 (102)
                      +|++|.+++..++-|.+=|.+.
T Consensus       112 LG~Vrl~~kka~~~l~~il~~~  133 (136)
T 3t12_B          112 LGKVKLHGKAAAAALAAIAEEA  133 (136)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEeeehHHHHHHHHHHHHHHH
Confidence            9999999999999998877654

>1j3w_A Giding PROTEIN-MGLB; gliding, motility, mutational function, riken structur genomics/proteomics initiative, RSGI, structural genomics; HET: MES; 1.50A {Thermus thermophilus} SCOP: d.110.7.1 PDB: 3t1r_A 3t1s_A 3t1x_A

Probab=99.27  E-value=1.4e-11  Score=89.03  Aligned_cols=95  Identities=14%  Similarity=0.135  Sum_probs=84.8

Q ss_pred             CCcccEEEe-----ecCCCCchhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecc-eeeeeeeecCc
Q psy7055           2 SYEGTLLAY-----SGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVAN-VLLCLYAKENV   75 (102)
Q Consensus         2 ~~eG~LlA~-----s~~~d~~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~-~LLcl~a~~~v   75 (102)
                      +.||.+|++     ++..+ |+..+||++|.+.+..++-++. |..+.++++++|+++|.+.++++++ .+|++.+++++
T Consensus        36 s~DGl~ia~~~~~~~~~~~-d~d~lAA~~A~~~sl~~~~a~~-l~~G~~~q~~ve~~~g~l~v~~~g~~a~L~Vla~~~a  113 (163)
T 1j3w_A           36 DRKGFVLAHKEALWAPKPP-PLDTLATLVAGNAAATQALAKL-LGEARFQEEVHQGERMGLYVDEAGEHALLVLVFDETA  113 (163)
T ss_dssp             ETTSCEEEEEECTTSCCCS-CHHHHHHHHHHHHHHTHHHHHH-TTCSSCSEEEEECSSCEEEEEESSTTEEEEEEECTTS
T ss_pred             cCCCCEEEeecccccCCCC-cHHHHHHHHHHHHHHHHHHHHH-hCCCCceEEEEEeCCcEEEEEEeCCCeEEEEEeCCCC
Confidence            579999999     87777 9999999999999998887754 5678899999999999999999997 99999999999


Q ss_pred             cccchHHHHHHHHHHhhhhhccc
Q psy7055          76 CFGMLRAKAEALATYLEAPLKQV   98 (102)
Q Consensus        76 ~~GlLk~K~~al~~~Le~pL~~i   98 (102)
                      ++|+++..++.+++.|.+-|+..
T Consensus       114 ~lG~v~~~m~~~v~~l~~~L~~~  136 (163)
T 1j3w_A          114 PLGKVKLHGKRASEALARIAEEA  136 (163)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998888777766553

>3kye_A Roadblock/LC7 domain, ROBL_LC7; alpga-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces avermitilis}

Probab=99.11  E-value=3.2e-10  Score=81.64  Aligned_cols=94  Identities=17%  Similarity=0.228  Sum_probs=81.5

Q ss_pred             CCcccEEEee-cCCCCchhHHHHHHHHHHHHHHhcCccccc-cccceeeeeeecCceEEeeeecc-eeeeeeeecCcccc
Q psy7055           2 SYEGTLLAYS-GHKDNDGTVIAAITSNIWSAFEKNGRSAFK-EDSLQMVLMECSNGKVAITQVAN-VLLCLYAKENVCFG   78 (102)
Q Consensus         2 ~~eG~LlA~s-~~~d~~a~v~AAiasniW~ay~r~g~~~~~-~~~L~~~lie~e~Gri~i~~Va~-~LLcl~a~~~v~~G   78 (102)
                      +.||. ++.+ +.+..++.-+||++|.+.+.-++-+.+ |. ...++|+|||+++|.+.++.++. .+|++.+++++++|
T Consensus        48 S~DGL-la~S~~l~~~dae~LAA~aSgl~SLa~~aa~~-~~~~G~vrqv~VE~~~G~l~v~~aG~ga~LaVla~~~adlG  125 (150)
T 3kye_A           48 SCDGL-VKSVHGLDPDSADHMAALASGLYSLGRSAGIR-FGDGGDVRQVVVELDSTLLFVSTAGSGTCLAVLAGREADAA  125 (150)
T ss_dssp             ETTSC-EEEEESSCHHHHHHHHHHHHHHHHHHHHHHHH-HSSSSCCCEEEEEESSEEEEEEEEETTEEEEEEEETTSCHH
T ss_pred             cCCCC-EeecCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hccCCCeEEEEEEeCCcEEEEEEcCCCcEEEEEeCCCCCHH
Confidence            57999 6665 555568999999999999999887765 45 68999999999999999999996 99999999999999


Q ss_pred             chHHHHHHHHHHhhhhhcc
Q psy7055          79 MLRAKAEALATYLEAPLKQ   97 (102)
Q Consensus        79 lLk~K~~al~~~Le~pL~~   97 (102)
                      ++.-.|+.+++.+.+-|..
T Consensus       126 lv~~em~~lv~rig~~Lt~  144 (150)
T 3kye_A          126 VLGYEMAMLVKSVRPYLMT  144 (150)
T ss_dssp             HHHHHHHHHHHHHGGGGC-
T ss_pred             HHHHHHHHHHHHHHHhcCC
Confidence            9999999999888777654

>3cpt_A Mitogen-activated protein kinase kinase 1- interacting protein 1; scaffold, complex, alpha/beta, endosome, membrane, lysosome; 1.90A {Homo sapiens} SCOP: d.110.7.1 PDB: 1sko_A 2zl1_A 1vet_A 1veu_A

Probab=95.14  E-value=0.26  Score=35.03  Aligned_cols=89  Identities=10%  Similarity=0.157  Sum_probs=65.2

Q ss_pred             CCcccEEEeecCCC-CchhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecceeeeeeeecCccccch
Q psy7055           2 SYEGTLLAYSGHKD-NDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGML   80 (102)
Q Consensus         2 ~~eG~LlA~s~~~d-~~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~~LLcl~a~~~v~~GlL   80 (102)
                      |+||..|..++.+. .+.+.-..+.+. |..+..++. -+.-+..|.++--+++..++-.....+.+-++|.++.+.|+|
T Consensus        45 DrDGVpi~kv~~~~~~e~~~r~s~lsT-f~~A~dQ~s-KLglGknksII~~Y~~yqvVq~n~~Plvit~Ias~~aNtG~I  122 (143)
T 3cpt_A           45 DRDGVPVIKVANDNAPEHALRPGFLST-FALATDQGS-KLGLSKNKSIICYYNTYQVVQFNRLPLVVSFIASSSANTGLI  122 (143)
T ss_dssp             CTTSCEEEEEECTTSCGGGGSHHHHHH-HHHHHHHHH-HHTCCCEEEEEEECSSEEEEEEEETTEEEEEEEETTSCHHHH
T ss_pred             CCCCcEEEEecCCCCchhhcccchhhh-HHHHHHHHh-hcCCCCCceEEEEecCeEEEEEecCCEEEEEEecCCCCchhH
Confidence            68999999998765 345555555555 444433321 123467889998899988888788889999999999999999


Q ss_pred             HHHHHHHHHHhh
Q psy7055          81 RAKAEALATYLE   92 (102)
Q Consensus        81 k~K~~al~~~Le   92 (102)
                      .+=-+.|..+|+
T Consensus       123 l~Le~~L~p~l~  134 (143)
T 3cpt_A          123 VSLEKELAPLFE  134 (143)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHH
Confidence            876666665554

>4ftx_A Protein SLM4; EGO complex, EGO3, TOR signaling, protein binding; 2.10A {Saccharomyces cerevisiae} PDB: 3lgo_A 4fuw_A

Probab=94.36  E-value=0.6  Score=33.94  Aligned_cols=87  Identities=18%  Similarity=0.319  Sum_probs=60.4

Q ss_pred             CcccEEEeecCCCCc-------------hhHHHHHHHHHHHHHHhcCccccc---------cccceeeeeeecCceEEee
Q psy7055           3 YEGTLLAYSGHKDND-------------GTVIAAITSNIWSAFEKNGRSAFK---------EDSLQMVLMECSNGKVAIT   60 (102)
Q Consensus         3 ~eG~LlA~s~~~d~~-------------a~v~AAiasniW~ay~r~g~~~~~---------~~~L~~~lie~e~Gri~i~   60 (102)
                      ..|++|+|+..++.+             -++-+=+.=.=|++=|+.-.+--.         -..-+--.-|.|+=+.|++
T Consensus        41 ~nGsIlSfa~s~~~~~~~~~~~~~SlnNLKMMsLLikDKWseDE~~p~eQ~t~ScY~~~i~~~~trIYTYEiEDLHaCVA  120 (170)
T 4ftx_A           41 TNGGILSYATSNNDVPKNSINEINSVNNLKMMSLLIKDKWSEDENDTEEQHSNSCYPVEIDSFKTKIYTYEMEDLHTCVA  120 (170)
T ss_dssp             TTCCEEEEEECCSSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCSSEEEEEEETTEEEEEEEEEETTEEEEEE
T ss_pred             CCCcEEEEecCCCCcccCCcCccccchhHHHHHHHHHhhhhccccChhhhhcccceeEEeccceeEEEEEEhhhhHHHHh
Confidence            589999999864432             122333334459998875433100         0112223457789999999


Q ss_pred             eecc--eeeeeeeecCccccchHHHHHHHHH
Q psy7055          61 QVAN--VLLCLYAKENVCFGMLRAKAEALAT   89 (102)
Q Consensus        61 ~Va~--~LLcl~a~~~v~~GlLk~K~~al~~   89 (102)
                      +|++  +||-++|+.+-+.|+|-.|+++...
T Consensus       121 qIP~SDLLLLfIAd~~yPyGLLv~KmK~al~  151 (170)
T 4ftx_A          121 QIPNSDLLLLFIAEGSFPYGLLVIKIERAMR  151 (170)
T ss_dssp             ECTTSSEEEEEEEETTSCHHHHHHHHHHHHG
T ss_pred             cCCCCCeEEEEeecCCCchHHHHHHHHHHHH
Confidence            9985  9999999999999999999988754

>3lgo_A Protein SLM4; roadblock/LC7, domain SWAP, autophagy, membrane, transmembra transport, vacuole, protein binding; 2.85A {Saccharomyces cerevisiae}

Probab=92.60  E-value=1.3  Score=32.08  Aligned_cols=89  Identities=21%  Similarity=0.405  Sum_probs=59.8

Q ss_pred             CcccEEEeecCCCC-------------chhHHHHHHHHHHHHHHhcCcc-----cc--ccccce--eeeeeecCceEEee
Q psy7055           3 YEGTLLAYSGHKDN-------------DGTVIAAITSNIWSAFEKNGRS-----AF--KEDSLQ--MVLMECSNGKVAIT   60 (102)
Q Consensus         3 ~eG~LlA~s~~~d~-------------~a~v~AAiasniW~ay~r~g~~-----~~--~~~~L~--~~lie~e~Gri~i~   60 (102)
                      ..|++|+|+...+.             .=+.-|=+.=.=|++=|..-++     ..  +-+...  ----|.|+=..|++
T Consensus        51 tnGsIlSfa~~~~~~~~~~~~e~~SlNNLKMMaLLIkDKWsEDe~d~~~q~~~scy~~~~~~~~triYTyElEDLHacvA  130 (172)
T 3lgo_A           51 TNGGILSYATSNNDVPKNSINEINSVNNLKMMSLLIKDKWSEDENDTEEQHSNSCYPVEIDSFKTKIYTYEMEDLHTCVA  130 (172)
T ss_dssp             TTCCEEEEECCC------------CHHHHHHHHHHHHHHHHTTTTCC---CCSSBCCEEETTEEECEEEEESSSCEEEEE
T ss_pred             CCCcEEEEeccCCccccCCCCcccchhhHHHHHHHHhhcccccccchhHhccccceeecccccceeEEEEehhHHHHHHH
Confidence            47999999987652             2345666666679887632111     00  001111  12247779999999


Q ss_pred             eecc--eeeeeeeecCccccchHHHHHHHHHHh
Q psy7055          61 QVAN--VLLCLYAKENVCFGMLRAKAEALATYL   91 (102)
Q Consensus        61 ~Va~--~LLcl~a~~~v~~GlLk~K~~al~~~L   91 (102)
                      +|++  +||-++|..+-+.|+|-.|+++..+-+
T Consensus       131 qIP~SdLLLlfIA~~~fPyGLLvmKmK~al~af  163 (172)
T 3lgo_A          131 QIPNSDLLLLFIAEGSFPYGLLVIKIERAMREL  163 (172)
T ss_dssp             ECTTTCEEEEEEECTTSCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCeEEEEEecCCCCchHHHHHHHHHHHHH
Confidence            9986  999999999999999999998775543

>3nul_A Profilin I; cytoskeleton, actin binding protein; HET: MSE; 1.60A {Arabidopsis thaliana} SCOP: d.110.1.1 PDB: 1a0k_A 1cqa_A 1g5u_A

Probab=86.22  E-value=5.7  Score=26.73  Aligned_cols=88  Identities=18%  Similarity=0.209  Sum_probs=50.4

Q ss_pred             CcccEEEeec-CCCCchhHHHHHHHHHHHHHHhcC--ccccccccceeeeeeecCce----------EEeeeecceeeee
Q psy7055           3 YEGTLLAYSG-HKDNDGTVIAAITSNIWSAFEKNG--RSAFKEDSLQMVLMECSNGK----------VAITQVANVLLCL   69 (102)
Q Consensus         3 ~eG~LlA~s~-~~d~~a~v~AAiasniW~ay~r~g--~~~~~~~~L~~~lie~e~Gr----------i~i~~Va~~LLcl   69 (102)
                      .||++-|.+. .+.-.+.=+.+|+ +...  ++..  .+.+.-..-+++++-.|.++          ++|.+-...|+..
T Consensus        27 ~dGsvWA~s~gf~~~~p~E~~~i~-~~f~--d~~~~~~~Gl~l~G~Ky~~ir~d~~~~i~~kkg~~Gv~i~kT~~aivig  103 (130)
T 3nul_A           27 QDGSVWAQSAKFPQLKPQEIDGIK-KDFE--EPGFLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFG  103 (130)
T ss_dssp             TTSCEEEECTTCCCCCHHHHHHHH-HHHH--STTSSTTTCEEETTEEEEEEEEETTTEEEEEETTEEEEEEECSSEEEEE
T ss_pred             CCCCEEEcCCCcccCCHHHHHHHH-Hhcc--CchhhccCCEEECCeEEEEEEeCCCcEEEEecCCCeEEEEECCCEEEEE
Confidence            5788877653 3232233333442 2221  1111  11233345566666666232          4444445655555


Q ss_pred             eeecCccccchHHHHHHHHHHhhh
Q psy7055          70 YAKENVCFGMLRAKAEALATYLEA   93 (102)
Q Consensus        70 ~a~~~v~~GlLk~K~~al~~~Le~   93 (102)
                      +.++.+.-|....+.+.|++||..
T Consensus       104 ~y~e~~~~g~~~~~ve~ladYL~~  127 (130)
T 3nul_A          104 FYDEPMTGGQCNLVVERLGDYLIE  127 (130)
T ss_dssp             EECTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCCHHHHHHHHHHHHHHHHH
Confidence            666679999999999999999975

>3d9y_A Profilin; yeast, actin-binding, cytoskeleton, protein; 1.65A {Schizosaccharomyces pombe} SCOP: d.110.1.0 PDB: 3dav_A

Probab=82.68  E-value=8.5  Score=25.66  Aligned_cols=53  Identities=17%  Similarity=0.125  Sum_probs=37.8

Q ss_pred             ccccceeeeeeecCce---------EEeeeecceeeeeeeecCccccchHHHHHHHHHHhhh
Q psy7055          41 KEDSLQMVLMECSNGK---------VAITQVANVLLCLYAKENVCFGMLRAKAEALATYLEA   93 (102)
Q Consensus        41 ~~~~L~~~lie~e~Gr---------i~i~~Va~~LLcl~a~~~v~~GlLk~K~~al~~~Le~   93 (102)
                      .-..-+++++-.++..         ++|.+-...|+..+.++++.-|....+.+.|++||..
T Consensus        63 ~l~G~Ky~vir~d~~~i~~kkg~~Gv~i~kT~~aivi~~y~e~~~~g~~~~~ve~ladYL~~  124 (127)
T 3d9y_A           63 ILAGQKYITIRAEGRSIYGKLQKEGIICVATKLCILVSHYPETTLPGEAAKITEALADYLVG  124 (127)
T ss_dssp             EETTEEEEEEEECSSEEEEEETTEEEEEEECSSEEEEEEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EEcCeEEEEEEeCcceEEEEcCCceEEEEECCCEEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence            3456667777766332         4555555655555566789999999999999999975

>1acf_A Profilin I; protein binding, actin-binding protein, contractIle protein; 2.00A {Acanthamoeba castellanii} SCOP: d.110.1.1 PDB: 1prq_A 2prf_A 1f2k_A 2acg_A

Probab=80.53  E-value=9  Score=25.46  Aligned_cols=89  Identities=18%  Similarity=0.203  Sum_probs=51.1

Q ss_pred             CCcccEEEeecCCCCchhHHHHHHHHH--HHHHHhcCccccccccceeeeeeecC---------ceEEeeeecceeeeee
Q psy7055           2 SYEGTLLAYSGHKDNDGTVIAAITSNI--WSAFEKNGRSAFKEDSLQMVLMECSN---------GKVAITQVANVLLCLY   70 (102)
Q Consensus         2 ~~eG~LlA~s~~~d~~a~v~AAiasni--W~ay~r~g~~~~~~~~L~~~lie~e~---------Gri~i~~Va~~LLcl~   70 (102)
                      +.||++.|.+..=.-.+.=+.+|+.-+  -.....+|   +.-..-+++.+-.++         +-++|.+....++.-+
T Consensus        23 g~dGsvwA~s~~f~~~~~E~~~i~~~f~~~~~~~~~G---i~l~G~KY~~i~~d~~~i~~kk~~~Gv~i~kT~~aivI~~   99 (125)
T 1acf_A           23 GLDGNTWATSAGFAVTPAQGTTLAGAFNNADAIRAGG---FDLAGVHYVTLRADDRSIYGKKGSSGVITVKTSKAILVGV   99 (125)
T ss_dssp             ETTSCEEEECTTCCCCHHHHHHHHHHHHCCHHHHHHC---EEETTEEEEEEEESSSEEEEEETTEEEEEEECSSEEEEEE
T ss_pred             cCCCCEEEecCCCccCHHHHHHHHHHhcCcchhhcCC---eEECCEEEEEEEecCcEEEeecCCCeEEEEECCCEEEEEE
Confidence            358899887643221222223332211  01222233   233555666666652         2345555556555555


Q ss_pred             eecCccccchHHHHHHHHHHhhh
Q psy7055          71 AKENVCFGMLRAKAEALATYLEA   93 (102)
Q Consensus        71 a~~~v~~GlLk~K~~al~~~Le~   93 (102)
                      .++++.-|-.....+.|++||.+
T Consensus       100 y~~~~~~g~~~~~ve~ladyL~~  122 (125)
T 1acf_A          100 YNEKIQPGTAANVVEKLADYLIG  122 (125)
T ss_dssp             ECTTSCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHH
Confidence            56678899999999999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	102
d1vetb_	118	d.110.7.1 (B:) Late endosomal/lysosomal Mp1 intera	3e-23

>d1vetb_ d.110.7.1 (B:) Late endosomal/lysosomal Mp1 interacting protein p14 {Mouse (Mus musculus) [TaxId: 10090]} Length = 118

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Roadblock/LC7 domain
family: Roadblock/LC7 domain
domain: Late endosomal/lysosomal Mp1 interacting protein p14
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.1 bits (208), Expect = 3e-23
 Identities = 59/94 (62%), Positives = 76/94 (80%)

Query: 1   MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAIT 60
           ++ EG+LLAYSG+ D D  V AAI SNIW+A+++NG  AF EDSL+ +LM+C  G+VAIT
Sbjct: 25  LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAIT 84

Query: 61  QVANVLLCLYAKENVCFGMLRAKAEALATYLEAP 94
           +VAN+LLC+YAKE V FGML+AKA+AL  YLE P
Sbjct: 85  RVANLLLCMYAKETVGFGMLKAKAQALVQYLEEP 118

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	102
d1vetb_	118	Late endosomal/lysosomal Mp1 interacting protein p	99.83
d1j3wa_	134	Giding protein MglB {Thermus thermophilus [TaxId:	99.25
d3cpta1	116	MEK binding partner 1, MP1 {Human (Homo sapiens) [	97.27

>d1vetb_ d.110.7.1 (B:) Late endosomal/lysosomal Mp1 interacting protein p14 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Roadblock/LC7 domain
family: Roadblock/LC7 domain
domain: Late endosomal/lysosomal Mp1 interacting protein p14
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=9.2e-21  Score=129.11  Aligned_cols=94  Identities=63%  Similarity=1.068  Sum_probs=90.5

Q ss_pred             CCCcccEEEeecCCCCchhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecceeeeeeeecCccccch
Q psy7055           1 MSYEGTLLAYSGHKDNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGML   80 (102)
Q Consensus         1 ~~~eG~LlA~s~~~d~~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~~LLcl~a~~~v~~GlL   80 (102)
                      +++||.+|+++++.+.|+..+|||++++|...++.+.+.|..+.+++++||+++|++.++++++.+||+++++++++|+|
T Consensus        25 vs~DGl~ia~~~~~~~d~~~lAAi~a~~l~~~~~~a~~~~~~G~~~qviie~~~G~l~i~~~g~~~L~vla~~~~~lGll  104 (118)
T d1vetb_          25 LNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAITRVANLLLCMYAKETVGFGML  104 (118)
T ss_dssp             ECTTCCEEEEEECCSSCHHHHHHHHHHHHHHHHHHHCCTTTCCCCCEEEEEETTEEEEEEEETTEEEEEEECTTSCHHHH
T ss_pred             ECCCCCeeeecCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEEcCCCEEEEEEcccCeEEEEecCCCCchHH
Confidence            37899999999988889999999999999999999988888999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhh
Q psy7055          81 RAKAEALATYLEAP   94 (102)
Q Consensus        81 k~K~~al~~~Le~p   94 (102)
                      +.+++.++++|++|
T Consensus       105 ~~e~~~~~~~L~~p  118 (118)
T d1vetb_         105 KAKAQALVQYLEEP  118 (118)
T ss_dssp             HHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999999998

>d1j3wa_ d.110.7.1 (A:) Giding protein MglB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Roadblock/LC7 domain
family: Roadblock/LC7 domain
domain: Giding protein MglB
species: Thermus thermophilus [TaxId: 274]

Probab=99.25  E-value=1.5e-11  Score=84.27  Aligned_cols=95  Identities=14%  Similarity=0.110  Sum_probs=84.6

Q ss_pred             CCcccEEEeecCC----CCchhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecc-eeeeeeeecCcc
Q psy7055           2 SYEGTLLAYSGHK----DNDGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVAN-VLLCLYAKENVC   76 (102)
Q Consensus         2 ~~eG~LlA~s~~~----d~~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~-~LLcl~a~~~v~   76 (102)
                      ++||.+|++.+..    +.|+...||++|.+.+..++-+... ..++++++++|.++|.+.+++++. .+|++.++++++
T Consensus        31 s~dGl~ia~~~~~~~~~~~d~~~lAA~~a~~~~~~~~~a~~l-~~g~~~~~~ie~~~g~v~i~~~g~~~~L~vl~~~~~~  109 (134)
T d1j3wa_          31 DRKGFVLAHKEALWAPKPPPLDTLATLVAGNAAATQALAKLL-GEARFQEEVHQGERMGLYVDEAGEHALLVLVFDETAP  109 (134)
T ss_dssp             ETTSCEEEEEECTTSCCCSCHHHHHHHHHHHHHHTHHHHHHT-TCSSCSEEEEECSSCEEEEEESSTTEEEEEEECTTSC
T ss_pred             CCCCcEEEeecCcCCCccccHHHHHHHHHHHHHHHHHHHHHh-cCCChhheeEEcCCcEEEEEEeCCCcEEEEEeCCCCC
Confidence            5799999997542    3589999999999999999887654 677899999999999999999997 999999999999


Q ss_pred             ccchHHHHHHHHHHhhhhhcc
Q psy7055          77 FGMLRAKAEALATYLEAPLKQ   97 (102)
Q Consensus        77 ~GlLk~K~~al~~~Le~pL~~   97 (102)
                      +|++|..++..++.|.+=|++
T Consensus       110 LG~v~~~~~~a~~~L~~il~~  130 (134)
T d1j3wa_         110 LGKVKLHGKRASEALARIAEE  130 (134)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999877654

>d3cpta1 d.110.7.1 (A:3-118) MEK binding partner 1, MP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Roadblock/LC7 domain
family: Roadblock/LC7 domain
domain: MEK binding partner 1, MP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.0012  Score=43.88  Aligned_cols=90  Identities=9%  Similarity=0.148  Sum_probs=70.3

Q ss_pred             CCcccEEEeecCCCC-chhHHHHHHHHHHHHHHhcCccccccccceeeeeeecCceEEeeeecceeeeeeeecCccccch
Q psy7055           2 SYEGTLLAYSGHKDN-DGTVIAAITSNIWSAFEKNGRSAFKEDSLQMVLMECSNGKVAITQVANVLLCLYAKENVCFGML   80 (102)
Q Consensus         2 ~~eG~LlA~s~~~d~-~a~v~AAiasniW~ay~r~g~~~~~~~~L~~~lie~e~Gri~i~~Va~~LLcl~a~~~v~~GlL   80 (102)
                      |+||..|..+..++. +....+.+ -+.|..+..++.- +.-+..+.++-.+++..++......+.++++|.++.+.|++
T Consensus        24 DrDGVpv~~v~~~~~p~~~~~~~~-lstf~~a~dq~sK-Lglg~~ksii~~Y~~~qvv~~~~~pl~vt~ia~~~aNtG~I  101 (116)
T d3cpta1          24 DRDGVPVIKVANDNAPEHALRPGF-LSTFALATDQGSK-LGLSKNKSIICYYNTYQVVQFNRLPLVVSFIASSSANTGLI  101 (116)
T ss_dssp             CTTSCEEEEEECTTSCGGGGSHHH-HHHHHHHHHHHHH-HTCCCEEEEEEECSSEEEEEEEETTEEEEEEEETTSCHHHH
T ss_pred             cCCCcEEEEecCCCChhhhcchHH-HHHHHHHHHhhcc-cCCCCCcEEEEEecCeEEEEEecCceEEEEEecCCCChHHH
Confidence            689999988887653 33445555 3346666555432 34578899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhh
Q psy7055          81 RAKAEALATYLEA   93 (102)
Q Consensus        81 k~K~~al~~~Le~   93 (102)
                      ..=-+.|...|++
T Consensus       102 l~l~~~l~~~L~~  114 (116)
T d3cpta1         102 VSLEKELAPLFEE  114 (116)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh
Confidence            9887888777764