Psyllid ID: psy7193

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MSDGKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLSTNGHHLNMM
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccEEEEEEEcEEEEEEEcEEEEEEccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHEEEEcccccEEEEEEEEccEcEEEEcEEEEEEccccccccccccccccEEccc
Coil and Loop (DISEMBL)
msdgkdklpilpsrgnqSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENiggvflteyeavengpdvyqiaglstnghhlnmm
Flexible Loop (DISEMBL)
msdgkdklpilpsrgnqsaIEARLVsakrghgllkRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLSTNGHHLNMM
Low Complexity Region (SEG)
MSDGKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLSTNGHHLNMM
Disordered region (IsUnstruct)
****************************RGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGL**********
Disordered Region (DISOPRED)
*****DK**ILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVE**YLMADIMREAAIALSRAKFETNAVFNQIVI*NIG****KLRLTRENIGGVFLTEYEAVENGPDVYQIAGLSTNGHH****
Disordered Region (DISEMBL)
MSDGKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLSTNGHHLNMM
Disordered Region (DISPRO)
*******LPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLSTNGH*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSDGKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLSTNGHHLNMM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	136	2.2.26 [Sep-21-2011]
Q9V7D2	246	V-type proton ATPase subu	yes	N/A	0.948	0.524	0.538	1e-36
Q9U0S4	246	V-type proton ATPase subu	N/A	N/A	0.948	0.524	0.523	5e-35
Q9NEF6	249	Probable V-type proton AT	no	N/A	0.948	0.518	0.515	6e-34
P34462	257	V-type proton ATPase subu	yes	N/A	0.948	0.501	0.469	3e-30
Q61IU3	259	V-type proton ATPase subu	N/A	N/A	0.948	0.498	0.461	1e-29
Q5RCS8	247	V-type proton ATPase subu	yes	N/A	0.948	0.522	0.476	2e-28
Q9Y5K8	247	V-type proton ATPase subu	yes	N/A	0.948	0.522	0.476	2e-28
P39942	247	V-type proton ATPase subu	yes	N/A	0.948	0.522	0.476	2e-28
P57746	247	V-type proton ATPase subu	yes	N/A	0.948	0.522	0.476	2e-28
O97755	247	V-type proton ATPase subu	yes	N/A	0.948	0.522	0.469	6e-28

>sp|Q9V7D2|VATD1_DROME V-type proton ATPase subunit D 1 OS=Drosophila melanogaster GN=Vha36-1 PE=2 SV=1

 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 98/130 (75%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM D+M
Sbjct: 3   GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T+   NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKF-TSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.
Drosophila melanogaster (taxid: 7227)

>sp|Q9U0S4|VATD_MANSE V-type proton ATPase subunit D OS=Manduca sexta PE=2 SV=1

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 68/130 (52%), Positives = 96/130 (73%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+L I PSRG Q  ++ RL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM ++M
Sbjct: 3   GKDRLAIFPSRGAQMLMKGRLAGAQKGHGLLKKKADALQVRFRLILSKIIETKTLMGEVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T   FNQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKF-TTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.

Manduca sexta (taxid: 7130)

>sp|Q9NEF6|VATD2_DROME Probable V-type proton ATPase subunit D 2 OS=Drosophila melanogaster GN=Vha36-3 PE=3 SV=1

 Score =  142 bits (358), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 67/130 (51%), Positives = 93/130 (71%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
            KD+LPI PSRG Q+ +++RL  A +GHGLLK+KADALQ RFR I  KI+ET+ LM  +M
Sbjct: 3   AKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+  KF T  + NQIV+QN+ KAQ+K+R  ++N+ GV L  +E   +G D Y++
Sbjct: 63  KEAAFSLAEVKFTTGDI-NQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.

Drosophila melanogaster (taxid: 7227)

>sp|P34462|VATD_CAEEL V-type proton ATPase subunit D OS=Caenorhabditis elegans GN=vha-14 PE=3 SV=1

 Score =  130 bits (327), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 91/130 (70%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD++ + PSR  Q+ ++ RL  A++GH LLK+KADAL  RFR I  KIVE + LM ++M
Sbjct: 5   GKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEVM 64

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T   F+  VIQN+ +AQ ++R+ +EN+ GVFL  ++A ++GPD Y +
Sbjct: 65  KEAAFSLAEAKF-TAGDFSHTVIQNVSQAQYRVRMKKENVVGVFLPVFDAYQDGPDAYDL 123

Query: 124 AGLSTNGHHL 133
            GL   G ++
Sbjct: 124 TGLGKGGANI 133

Subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.

Caenorhabditis elegans (taxid: 6239)

>sp|Q61IU3|VATD_CAEBR V-type proton ATPase subunit D OS=Caenorhabditis briggsae GN=vha-14 PE=3 SV=1

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 90/130 (69%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD++ + PSR  Q+ ++ RL  A++GH LLK+KADAL  RFR I  KIVE + LM ++M
Sbjct: 6   GKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILKKIVENKVLMGEVM 65

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T   F+  VIQN+ +AQ ++R+ +EN+ GV L  ++A ++GPD Y +
Sbjct: 66  KEAAFSLAEAKF-TAGDFSHTVIQNVSQAQYRVRMKKENVVGVLLPVFDAYQDGPDAYDL 124

Query: 124 AGLSTNGHHL 133
            GL   G ++
Sbjct: 125 TGLGKGGANI 134

Subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.

Caenorhabditis briggsae (taxid: 6238)

>sp|Q5RCS8|VATD_PONAB V-type proton ATPase subunit D OS=Pongo abelii GN=ATP6V1D PE=2 SV=1

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct: 3   GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           REAA +L+ AKF T   F+  VIQN+ KAQ+K+R  ++N+ GV L  +E    G D Y++
Sbjct: 63  REAAFSLAEAKF-TAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL 121

Query: 124 AGLSTNGHHL 133
            GL+  G  L
Sbjct: 122 TGLARGGEQL 131

Subunit of the peripheral V1 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.

Pongo abelii (taxid: 9601)

>sp|Q9Y5K8|VATD_HUMAN V-type proton ATPase subunit D OS=Homo sapiens GN=ATP6V1D PE=1 SV=1

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct: 3   GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           REAA +L+ AKF T   F+  VIQN+ KAQ+K+R  ++N+ GV L  +E    G D Y++
Sbjct: 63  REAAFSLAEAKF-TAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL 121

Query: 124 AGLSTNGHHL 133
            GL+  G  L
Sbjct: 122 TGLARGGEQL 131

Subunit of the peripheral V1 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.

Homo sapiens (taxid: 9606)

>sp|P39942|VATD_BOVIN V-type proton ATPase subunit D OS=Bos taurus GN=ATP6V1D PE=1 SV=1

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct: 3   GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           REAA +L+ AKF T   F+  VIQN+ KAQ+K+R  ++N+ GV L  +E    G D Y++
Sbjct: 63  REAAFSLAEAKF-TAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL 121

Query: 124 AGLSTNGHHL 133
            GL+  G  L
Sbjct: 122 TGLARGGEQL 131

Subunit of the peripheral V1 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.

Bos taurus (taxid: 9913)

>sp|P57746|VATD_MOUSE V-type proton ATPase subunit D OS=Mus musculus GN=Atp6v1d PE=1 SV=1

 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct: 3   GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           REAA +L+ AKF T   F+  VIQN+ KAQ+K+R  ++N+ GV L  +E    G D Y++
Sbjct: 63  REAAFSLAEAKF-TAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL 121

Query: 124 AGLSTNGHHL 133
            GL+  G  L
Sbjct: 122 TGLARGGEQL 131

Subunit of the peripheral V1 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.

Mus musculus (taxid: 10090)

>sp|O97755|VATD_RABIT V-type proton ATPase subunit D OS=Oryctolagus cuniculus GN=ATP6V1D PE=2 SV=1

 Score =  122 bits (306), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 86/130 (66%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct: 3   GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           REAA +L+ AKF T   F+   IQN+ KAQ+K+R  ++N+ GV L  +E    G D Y++
Sbjct: 63  REAAFSLAEAKF-TAGDFSTTAIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL 121

Query: 124 AGLSTNGHHL 133
            GL+  G  L
Sbjct: 122 TGLARGGEQL 131

Subunit of the peripheral V1 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.

Oryctolagus cuniculus (taxid: 9986)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
195121090	246	GI20255 [Drosophila mojavensis] gi|19391	0.948	0.524	0.538	7e-35
195455362	247	GK23028 [Drosophila willistoni] gi|19417	0.970	0.534	0.526	7e-35
194757812	246	GF11142 [Drosophila ananassae] gi|190622	0.948	0.524	0.538	8e-35
21355551	246	vacuolar H[+] ATPase subunit 36-1 [Droso	0.948	0.524	0.538	8e-35
194882791	246	GG20533 [Drosophila erecta] gi|190658680	0.948	0.524	0.538	9e-35
195383420	248	GJ20208 [Drosophila virilis] gi|19414522	0.948	0.520	0.538	9e-35
289739793	246	vacuolar H+-ATPase v1 sector subunit D [	0.948	0.524	0.530	1e-34
125810103	246	GA20878 [Drosophila pseudoobscura pseudo	0.948	0.524	0.538	1e-34
195583666	260	GD11125 [Drosophila simulans] gi|1941936	0.948	0.496	0.538	1e-34
195029141	246	GH19969 [Drosophila grimshawi] gi|193903	0.948	0.524	0.538	2e-34

>gi|195121090|ref|XP_002005054.1| GI20255 [Drosophila mojavensis] gi|193910122|gb|EDW08989.1| GI20255 [Drosophila mojavensis]

 Score =  151 bits (382), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 98/130 (75%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM D+M
Sbjct: 3   GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRMILGKIIETKTLMGDVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T+   NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKF-TSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGADTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195455362|ref|XP_002074688.1| GK23028 [Drosophila willistoni] gi|194170773|gb|EDW85674.1| GK23028 [Drosophila willistoni]

 Score =  151 bits (382), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 70/133 (52%), Positives = 99/133 (74%), Gaps = 1/133 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM D+M
Sbjct: 3   GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRMILGKIIETKTLMGDVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF +  + NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKFASGDI-NQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGADTYEL 121

Query: 124 AGLSTNGHHLNMM 136
           AGL+  G  L  M
Sbjct: 122 AGLARGGQQLAKM 134

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194757812|ref|XP_001961156.1| GF11142 [Drosophila ananassae] gi|190622454|gb|EDV37978.1| GF11142 [Drosophila ananassae]

 Score =  151 bits (382), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 98/130 (75%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM D+M
Sbjct: 3   GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRMILGKIIETKTLMGDVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T+   NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKF-TSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGADTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|21355551|ref|NP_651987.1| vacuolar H[+] ATPase subunit 36-1 [Drosophila melanogaster] gi|195488528|ref|XP_002092353.1| GE11717 [Drosophila yakuba] gi|12585513|sp|Q9V7D2.1|VATD1_DROME RecName: Full=V-type proton ATPase subunit D 1; Short=V-ATPase subunit D 1; AltName: Full=Vacuolar H+ ATPase subunit 36-1; AltName: Full=Vacuolar proton pump subunit D 1; AltName: Full=dV-ATPase D gi|10121397|gb|AAG13186.1|AF218238_1 vacuolar proton-translocating ATPase subunit D [Drosophila melanogaster] gi|7303058|gb|AAF58126.1| vacuolar H[+] ATPase subunit 36-1 [Drosophila melanogaster] gi|17861568|gb|AAL39261.1| GH12958p [Drosophila melanogaster] gi|194178454|gb|EDW92065.1| GE11717 [Drosophila yakuba] gi|220945146|gb|ACL85116.1| Vha36-PA [synthetic construct] gi|220955058|gb|ACL90072.1| Vha36-PA [synthetic construct]

 Score =  151 bits (381), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 98/130 (75%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM D+M
Sbjct: 3   GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T+   NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKF-TSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Source: Drosophila melanogaster

Species: melanogaster group

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

>gi|194882791|ref|XP_001975493.1| GG20533 [Drosophila erecta] gi|190658680|gb|EDV55893.1| GG20533 [Drosophila erecta]

 Score =  151 bits (381), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 98/130 (75%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM D+M
Sbjct: 3   GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T+   NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKF-TSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195383420|ref|XP_002050424.1| GJ20208 [Drosophila virilis] gi|194145221|gb|EDW61617.1| GJ20208 [Drosophila virilis]

 Score =  151 bits (381), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 98/130 (75%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM D+M
Sbjct: 3   GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRMILGKIIETKTLMGDVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T+   NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKF-TSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGADTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289739793|gb|ADD18644.1| vacuolar H+-ATPase v1 sector subunit D [Glossina morsitans morsitans]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/130 (53%), Positives = 98/130 (75%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  +++RL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM ++M
Sbjct: 3   GKDRLPIFPSRGAQMLMKSRLAGAQKGHGLLKKKADALQMRFRMILGKIIETKTLMGEVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T   FNQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKF-TTGDFNQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGADTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125810103|ref|XP_001361358.1| GA20878 [Drosophila pseudoobscura pseudoobscura] gi|195172694|ref|XP_002027131.1| GL20077 [Drosophila persimilis] gi|54636533|gb|EAL25936.1| GA20878 [Drosophila pseudoobscura pseudoobscura] gi|194112944|gb|EDW34987.1| GL20077 [Drosophila persimilis]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 97/130 (74%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM D+M
Sbjct: 3   GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRMILGKIIETKTLMGDVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T+   NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+  +G D Y++
Sbjct: 63  KEAAFSLAEAKF-TSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYTDGADTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195583666|ref|XP_002081638.1| GD11125 [Drosophila simulans] gi|194193647|gb|EDX07223.1| GD11125 [Drosophila simulans]

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 98/130 (75%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM D+M
Sbjct: 3   GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T+   NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKF-TSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195029141|ref|XP_001987433.1| GH19969 [Drosophila grimshawi] gi|193903433|gb|EDW02300.1| GH19969 [Drosophila grimshawi]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 98/130 (75%), Gaps = 1/130 (0%)

Query: 4   GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
           GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM +IM
Sbjct: 3   GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRMILGKIIETKTLMGEIM 62

Query: 64  REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
           +EAA +L+ AKF T+   NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct: 63  KEAAFSLAEAKF-TSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGADTYEL 121

Query: 124 AGLSTNGHHL 133
           AGL+  G  L
Sbjct: 122 AGLARGGQQL 131

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
FB|FBgn0022097	246	Vha36-1 "Vacuolar H[+] ATPase	0.948	0.524	0.538	1.5e-33
FB|FBgn0040377	249	Vha36-3 "Vacuolar H[+] ATPase	0.941	0.514	0.519	4.2e-31
WB|WBGene00010130	257	vha-14 [Caenorhabditis elegans	0.948	0.501	0.469	1.9e-28
UNIPROTKB|P34462	257	vha-14 "V-type proton ATPase s	0.948	0.501	0.469	1.9e-28
UNIPROTKB|E1BT00	247	ATP6V1D "Uncharacterized prote	0.948	0.522	0.476	5.7e-27
UNIPROTKB|F1N270	247	ATP6V1D "V-type proton ATPase	0.948	0.522	0.476	7.3e-27
UNIPROTKB|P39942	247	ATP6V1D "V-type proton ATPase	0.948	0.522	0.476	7.3e-27
UNIPROTKB|Q2KJ66	200	ATP6V1D "V-type proton ATPase	0.948	0.645	0.476	7.3e-27
UNIPROTKB|E2QVC0	249	ATP6V1D "Uncharacterized prote	0.948	0.518	0.476	7.3e-27
UNIPROTKB|G3V559	179	ATP6V1D "V-type proton ATPase	0.948	0.720	0.476	7.3e-27

FB|FBgn0022097 Vha36-1 "Vacuolar H[+] ATPase 36kD subunit 1" [Drosophila melanogaster (taxid:7227)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 70/130 (53%), Positives = 98/130 (75%)

Query:     4 GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
             GKD+LPI PSRG Q  ++ARL  A++GHGLLK+KADALQ RFR I  KI+ET+ LM D+M
Sbjct:     3 GKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVM 62

Query:    64 REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
             +EAA +L+ AKF T+   NQ+V+QN+ KAQ+K+R  ++N+ GV L  +E+ ++G D Y++
Sbjct:    63 KEAAFSLAEAKF-TSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYEL 121

Query:   124 AGLSTNGHHL 133
             AGL+  G  L
Sbjct:   122 AGLARGGQQL 131

GO:0000221 "vacuolar proton-transporting V-type ATPase, V1 domain" evidence=ISS;NAS

GO:0015992 "proton transport" evidence=ISS

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

GO:0033181 "plasma membrane proton-transporting V-type ATPase complex" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

FB|FBgn0040377 Vha36-3 "Vacuolar H[+] ATPase 36kD subunit 3" [Drosophila melanogaster (taxid:7227)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 67/129 (51%), Positives = 93/129 (72%)

Query:     5 KDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMR 64
             KD+LPI PSRG Q+ +++RL  A +GHGLLK+KADALQ RFR I  KI+ET+ LM  +M+
Sbjct:     4 KDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMK 63

Query:    65 EAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIA 124
             EAA +L+  KF T  + NQIV+QN+ KAQ+K+R  ++N+ GV L  +E   +G D Y++A
Sbjct:    64 EAAFSLAEVKFTTGDI-NQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYELA 122

Query:   125 GLSTNGHHL 133
             GL+  G  L
Sbjct:   123 GLARGGQQL 131

GO:0000221 "vacuolar proton-transporting V-type ATPase, V1 domain" evidence=NAS

GO:0015992 "proton transport" evidence=NAS

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

WB|WBGene00010130 vha-14 [Caenorhabditis elegans (taxid:6239)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 61/130 (46%), Positives = 91/130 (70%)

Query:     4 GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
             GKD++ + PSR  Q+ ++ RL  A++GH LLK+KADAL  RFR I  KIVE + LM ++M
Sbjct:     5 GKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEVM 64

Query:    64 REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
             +EAA +L+ AKF T   F+  VIQN+ +AQ ++R+ +EN+ GVFL  ++A ++GPD Y +
Sbjct:    65 KEAAFSLAEAKF-TAGDFSHTVIQNVSQAQYRVRMKKENVVGVFLPVFDAYQDGPDAYDL 123

Query:   124 AGLSTNGHHL 133
              GL   G ++
Sbjct:   124 TGLGKGGANI 133

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

UNIPROTKB|P34462 vha-14 "V-type proton ATPase subunit D" [Caenorhabditis elegans (taxid:6239)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 61/130 (46%), Positives = 91/130 (70%)

Query:     4 GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
             GKD++ + PSR  Q+ ++ RL  A++GH LLK+KADAL  RFR I  KIVE + LM ++M
Sbjct:     5 GKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEVM 64

Query:    64 REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
             +EAA +L+ AKF T   F+  VIQN+ +AQ ++R+ +EN+ GVFL  ++A ++GPD Y +
Sbjct:    65 KEAAFSLAEAKF-TAGDFSHTVIQNVSQAQYRVRMKKENVVGVFLPVFDAYQDGPDAYDL 123

Query:   124 AGLSTNGHHL 133
              GL   G ++
Sbjct:   124 TGLGKGGANI 133

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|E1BT00 ATP6V1D "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 62/130 (47%), Positives = 88/130 (67%)

Query:     4 GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
             GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct:     3 GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKLLMGEVM 62

Query:    64 REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
             REAA +L+ AKF T   F+  VIQN+ KAQ+K+R  ++N+ GV L  +E  + G D Y++
Sbjct:    63 REAAFSLAEAKF-TAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYQEGGDSYEL 121

Query:   124 AGLSTNGHHL 133
              GL+  G  L
Sbjct:   122 TGLARGGEQL 131

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

GO:0016471 "vacuolar proton-transporting V-type ATPase complex" evidence=IEA

UNIPROTKB|F1N270 ATP6V1D "V-type proton ATPase subunit D" [Bos taurus (taxid:9913)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 62/130 (47%), Positives = 87/130 (66%)

Query:     4 GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
             GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct:     3 GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVM 62

Query:    64 REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
             REAA +L+ AKF T   F+  VIQN+ KAQ+K+R  ++N+ GV L  +E    G D Y++
Sbjct:    63 REAAFSLAEAKF-TAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL 121

Query:   124 AGLSTNGHHL 133
              GL+  G  L
Sbjct:   122 TGLARGGEQL 131

GO:0016471 "vacuolar proton-transporting V-type ATPase complex" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

UNIPROTKB|P39942 ATP6V1D "V-type proton ATPase subunit D" [Bos taurus (taxid:9913)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 62/130 (47%), Positives = 87/130 (66%)

Query:     4 GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
             GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct:     3 GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVM 62

Query:    64 REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
             REAA +L+ AKF T   F+  VIQN+ KAQ+K+R  ++N+ GV L  +E    G D Y++
Sbjct:    63 REAAFSLAEAKF-TAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL 121

Query:   124 AGLSTNGHHL 133
              GL+  G  L
Sbjct:   122 TGLARGGEQL 131

GO:0015992 "proton transport" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

UNIPROTKB|Q2KJ66 ATP6V1D "V-type proton ATPase subunit D" [Bos taurus (taxid:9913)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 62/130 (47%), Positives = 87/130 (66%)

Query:     4 GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
             GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct:     3 GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVM 62

Query:    64 REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
             REAA +L+ AKF T   F+  VIQN+ KAQ+K+R  ++N+ GV L  +E    G D Y++
Sbjct:    63 REAAFSLAEAKF-TAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL 121

Query:   124 AGLSTNGHHL 133
              GL+  G  L
Sbjct:   122 TGLARGGEQL 131

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

UNIPROTKB|E2QVC0 ATP6V1D "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 62/130 (47%), Positives = 87/130 (66%)

Query:     4 GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
             GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct:     3 GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVM 62

Query:    64 REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
             REAA +L+ AKF T   F+  VIQN+ KAQ+K+R  ++N+ GV L  +E    G D Y++
Sbjct:    63 REAAFSLAEAKF-TAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL 121

Query:   124 AGLSTNGHHL 133
              GL+  G  L
Sbjct:   122 TGLARGGEQL 131

GO:0016471 "vacuolar proton-transporting V-type ATPase complex" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

UNIPROTKB|G3V559 ATP6V1D "V-type proton ATPase subunit D" [Homo sapiens (taxid:9606)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 62/130 (47%), Positives = 87/130 (66%)

Query:     4 GKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63
             GKD++ I PSR  Q+ ++ARL  A+ G  LLK+K+DAL  RFR I  KI+ET+ LM ++M
Sbjct:     3 GKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVM 62

Query:    64 REAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQI 123
             REAA +L+ AKF T   F+  VIQN+ KAQ+K+R  ++N+ GV L  +E    G D Y++
Sbjct:    63 REAAFSLAEAKF-TAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL 121

Query:   124 AGLSTNGHHL 133
              GL+  G  L
Sbjct:   122 TGLARGGEQL 131

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9V7D2	VATD1_DROME	No assigned EC number	0.5384	0.9485	0.5243	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	136
pfam01813	191	pfam01813, ATP-synt_D, ATP synthase subunit D	4e-17
COG1394	211	COG1394, NtpD, Archaeal/vacuolar-type H+-ATPase su	9e-12
TIGR00309	209	TIGR00309, V_ATPase_subD, H(+)-transporting ATP sy	4e-09
PRK00373	204	PRK00373, PRK00373, V-type ATP synthase subunit D;	1e-04

>gnl|CDD|201987 pfam01813, ATP-synt_D, ATP synthase subunit D

 Score = 73.0 bits (180), Expect = 4e-17
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 2/119 (1%)

Query: 16  NQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKF 75
               ++ RL  A+RGH LLK+K DAL   FR++  +  E R  + + ++EA  +L+ A  
Sbjct: 1   ELIRLKRRLKLAQRGHKLLKKKRDALIREFRALLREAKELREELEEALKEAYFSLALANA 60

Query: 76  ETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLSTNGHHLN 134
                F + V +++ K  ++++++  NI GV +  +E VE         GL +    L+
Sbjct: 61  AEGIDFVESVAESV-KRVVEVKVSTRNIMGVKVPVFELVEVETAERPY-GLLSTSAWLD 117

This is a family of subunit D form various ATP synthases including V-type H+ transporting and Na+ dependent. Subunit D is suggested to be an integral part of the catalytic sector of the V-ATPase. Length = 191

>gnl|CDD|224312 COG1394, NtpD, Archaeal/vacuolar-type H+-ATPase subunit D [Energy production and conversion]

 Score = 59.6 bits (145), Expect = 9e-12
 Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 5/125 (4%)

Query: 7   KLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREA 66
            L + P+R     ++ RL  A+RGH LLK K DAL   FR+I  +  E R  +   + EA
Sbjct: 2   SLQVKPTRMELIRLKRRLKLARRGHKLLKLKRDALIMEFRAIVKEAKELREELEKELEEA 61

Query: 67  A--IALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIA 124
              +AL+ A    +AV     I  + K ++++ +  ENI GV +  +E VE  P  Y + 
Sbjct: 62  YESLALASAAEGIDAVEE---IALVQKEKLEVDVDVENIMGVVVPTFELVELTPPPYDLG 118

Query: 125 GLSTN 129
            LST+
Sbjct: 119 ILSTS 123

Length = 211

>gnl|CDD|129409 TIGR00309, V_ATPase_subD, H(+)-transporting ATP synthase, vacuolar type, subunit D

 Score = 52.5 bits (126), Expect = 4e-09
 Identities = 29/106 (27%), Positives = 52/106 (49%)

Query: 10  ILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIA 69
           + P+R     ++ +L  AKRG+ LLK K DAL   FR I  +  + +  M   ++EA   
Sbjct: 4   VNPTRMELLKLKDKLKMAKRGYSLLKLKRDALIMEFRQILERAKDIKNKMEQKLKEAISD 63

Query: 70  LSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVE 115
           L  A+         I   ++  A+ ++ +  +NI GV +  +++ E
Sbjct: 64  LIEAQSVMGPFAVWIAALSVVTARFEVDMKSKNIMGVVVPVFDSYE 109

Although this ATPase can run backwards, using a proton gradient to synthesize ATP, the primary biological role is to acidify some compartment, such as yeast vacuole (a lysosomal homolog) or the interior of a prokaryote [Transport and binding proteins, Cations and iron carrying compounds]. Length = 209

>gnl|CDD|178991 PRK00373, PRK00373, V-type ATP synthase subunit D; Reviewed

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 16/39 (41%), Positives = 21/39 (53%)

Query: 10 ILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSI 48
          + P+R     ++ RL  A+RGH LLK K D L   F  I
Sbjct: 6  VKPTRMELINLKRRLKLAERGHKLLKDKRDELIMEFFDI 44

Length = 204

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
KOG1647|consensus	255		100.0
COG1394	211	NtpD Archaeal/vacuolar-type H+-ATPase subunit D [E	99.97
PRK00373	204	V-type ATP synthase subunit D; Reviewed	99.97
TIGR00309	209	V_ATPase_subD H(+)-transporting ATP synthase, vacu	99.97
PRK02195	201	V-type ATP synthase subunit D; Provisional	99.95
PF01813	196	ATP-synt_D: ATP synthase subunit D ; InterPro: IPR	99.94

>KOG1647|consensus

Probab=100.00  E-value=7.7e-38  Score=239.84  Aligned_cols=134  Identities=45%  Similarity=0.747  Sum_probs=129.9

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchhcChh
Q psy7193           1 MSDGKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAV   80 (136)
Q Consensus         1 m~~~~~~~~V~PTR~~L~~lK~rl~~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A~~~l~~A~~~~G~~   80 (136)
                      || |+||++|+||||+|..+|.|++.|++||.|||+|+|||..+||.+.+++.+.+..++++|++|.|+|++|.+..| +
T Consensus         1 Ms-g~dr~~vFPtRm~~~~MKtrlkgAq~GhsLLKrKsdAL~~rfR~i~~~i~~~k~~mg~vMr~AaFslaea~f~~g-n   78 (255)
T KOG1647|consen    1 MS-GKDRLPVFPTRMNLTLMKTRLKGAQKGHSLLKRKSDALTVRFREILKKIVEAKMLMGEVMREAAFSLAEAKFLGG-N   78 (255)
T ss_pred             CC-ccccccccchHHHHHHHHHHHHHHhhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C
Confidence            76 589999999999999999999999999999999999999999999999999999999999999999999999999 9


Q ss_pred             HHHHHHhcccccceeEEEEeeEEeeEEeceEEeeecCCCccccccccccccccccC
Q psy7193          81 FNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLSTNGHHLNMM  136 (136)
Q Consensus        81 ~~~~~~~~v~~~~~~v~~~~~nvmGV~vP~~~~~~~~~~~y~~~gl~~gg~~i~~~  136 (136)
                      +...+.+++..+.++|+.+.+||.||.+|.|+.+.++.+.|+++||++|||||++|
T Consensus        79 ~~~~v~q~v~~a~v~vRsk~env~GV~Lp~fe~~~dg~~~~~LtgL~rgGqqv~~~  134 (255)
T KOG1647|consen   79 FKHQVQQNVKQATVKVRSKKENVSGVKLPTFELYQDGIDAFPLTGLGRGGQQVARL  134 (255)
T ss_pred             ccHHHHhhhhhheeeeeeeccccceeeechhhhhcccCccccccccccchHHHHHH
Confidence            99999999889999999999999999999999998888899999999999999976

>COG1394 NtpD Archaeal/vacuolar-type H+-ATPase subunit D [Energy production and conversion]

Probab=99.97  E-value=3.7e-30  Score=198.31  Aligned_cols=116  Identities=31%  Similarity=0.379  Sum_probs=104.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchhcChhHHHHHHh
Q psy7193           8 LPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQ   87 (136)
Q Consensus         8 ~~V~PTR~~L~~lK~rl~~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A~~~l~~A~~~~G~~~~~~~~~   87 (136)
                      .+|+||||||+++|+||++|++||+|||+|||+|+++|+++++++.+.+.++++.+++||++++.|....|.+....++.
T Consensus         3 ~~v~PTR~eL~~lk~rLkla~rg~~lLk~Krd~L~~ef~~i~~~~~~~r~e~~~~~~~a~~~~~~a~~~~g~~~ve~~~~   82 (211)
T COG1394           3 LQVKPTRMELIRLKRRLKLARRGHKLLKLKRDALIMEFRAIVKEAKELREELEKELEEAYESLALASAAEGIDAVEEIAL   82 (211)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHh
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999766666665


Q ss_pred             cccccceeEEEEeeEEeeEEeceEEeeecCCCccccc
Q psy7193          88 NIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIA  124 (136)
Q Consensus        88 ~v~~~~~~v~~~~~nvmGV~vP~~~~~~~~~~~y~~~  124 (136)
                      . .+..++|++..+|||||.||.|+......++|.+.
T Consensus        83 ~-~~~~~~v~~~~~nI~GV~vP~~~~~~~~~~~~~~~  118 (211)
T COG1394          83 V-QKEKLEVDVDVENIMGVVVPTFELVELTPPPYDLG  118 (211)
T ss_pred             C-CCCCceeeeceeeeeeeeeeeeeeeccCCCccccc
Confidence            4 45788999999999999999999886554555443

>PRK00373 V-type ATP synthase subunit D; Reviewed

Probab=99.97  E-value=1.2e-29  Score=195.15  Aligned_cols=120  Identities=25%  Similarity=0.294  Sum_probs=106.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchhcChhHHHHHH
Q psy7193           7 KLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVI   86 (136)
Q Consensus         7 ~~~V~PTR~~L~~lK~rl~~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A~~~l~~A~~~~G~~~~~~~~   86 (136)
                      +.+|+|||+||+++|++|++|++||+|||+|||+|+++|+++++++.++++++++.+++||++|+.|.+..|++....++
T Consensus         3 ~~~v~pTr~~L~~lk~~l~~a~rg~~lLk~Krd~L~~e~~~~~~~~~~~r~~~~~~~~~a~~~l~~a~~~~G~~~~~~~~   82 (204)
T PRK00373          3 RLNVKPTRMELINLKRRLKLAERGHKLLKDKRDELIMEFFDILDEAKKLREEVEEELEEAYKDFLMARAVEGSLAVEEAA   82 (204)
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999965555555


Q ss_pred             hcccccceeEEEEeeEEeeEEeceEEee-ec--CCCcccccccc
Q psy7193          87 QNIGKAQMKLRLTRENIGGVFLTEYEAV-EN--GPDVYQIAGLS  127 (136)
Q Consensus        87 ~~v~~~~~~v~~~~~nvmGV~vP~~~~~-~~--~~~~y~~~gl~  127 (136)
                      .+ .++..+|++..+|||||+||.|+.. ..  ..++|++.+++
T Consensus        83 ~~-~~~~~~v~~~~~ni~GV~vP~~~~~~~~~~~~~~y~~~~t~  125 (204)
T PRK00373         83 AS-PKESLEVDVSSKNIMGVVVPVIELSVKRTLPERGYGFLGTS  125 (204)
T ss_pred             hC-CCCCceEEEEeEEEEEEEeceEEeecccCCccCCcCcccCC
Confidence            54 5777899999999999999999983 32  34568777765

>TIGR00309 V_ATPase_subD H(+)-transporting ATP synthase, vacuolar type, subunit D

Probab=99.97  E-value=1.2e-29  Score=195.86  Aligned_cols=126  Identities=25%  Similarity=0.276  Sum_probs=106.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchhcChhHHHHHHhc
Q psy7193           9 PILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQN   88 (136)
Q Consensus         9 ~V~PTR~~L~~lK~rl~~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A~~~l~~A~~~~G~~~~~~~~~~   88 (136)
                      +|.||||||+++|+||++|++||+|||+|||+|+++|+++++++.++++++++.+++||++++.|.+..|.+....++.+
T Consensus         3 ~v~PTr~~L~~lk~rl~~a~rg~~lLk~Krd~L~~e~~~~~~~~~~~r~~~~~~~~~a~~~l~~a~~~~g~~~~~~~~~~   82 (209)
T TIGR00309         3 KVNPTRMELLKLKDKLKMAKRGYSLLKLKRDALIMEFRQILERAKDIKNKMEQKLKEAISDLIEAQSVMGPFAVWIAALS   82 (209)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHhc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999996555566666


Q ss_pred             ccccceeEEEEeeEEeeEEeceEEeeec-CCCccccccccccccccc
Q psy7193          89 IGKAQMKLRLTRENIGGVFLTEYEAVEN-GPDVYQIAGLSTNGHHLN  134 (136)
Q Consensus        89 v~~~~~~v~~~~~nvmGV~vP~~~~~~~-~~~~y~~~gl~~gg~~i~  134 (136)
                      ++.+.++|+++.+|||||+||.|+..+. ..+.-+..|+.+||+.+.
T Consensus        83 v~~~~~~v~~~~~ni~GV~vP~~~~~~~~~~~~~~~y~l~~t~~~~d  129 (209)
T TIGR00309        83 VVTARFEVDMKSKNIMGVVVPVFDSYEIRRKVHERGYGLLFTSYKVD  129 (209)
T ss_pred             CCcccceEEEEEEEEeeEEcceeEeeccccCccccCcCcccCCHHHH
Confidence            5558889999999999999999999642 111112234555556554

Although this ATPase can run backwards, using a proton gradient to synthesize ATP, the primary biological role is to acidify some compartment, such as yeast vacuole (a lysosomal homolog) or the interior of a prokaryote.

>PRK02195 V-type ATP synthase subunit D; Provisional

Probab=99.95  E-value=1.4e-27  Score=183.47  Aligned_cols=112  Identities=18%  Similarity=0.057  Sum_probs=102.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchhcChhHHHHHHhc
Q psy7193           9 PILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQN   88 (136)
Q Consensus         9 ~V~PTR~~L~~lK~rl~~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A~~~l~~A~~~~G~~~~~~~~~~   88 (136)
                      +|.|||+||+++|++|++|++||+||++|||+|+++|+++++++.++++++++.+++||.++..|....|.+     +..
T Consensus         4 ~v~pTK~eL~~lk~~L~~a~rg~~lLk~KR~~Li~e~~~~~~~~~~lr~~~~~~~~~a~~~l~~a~~~~g~~-----~~~   78 (201)
T PRK02195          4 KIKLTKNSLKKQKKQLKMLERYLPTLKLKKAQLQAEVRRAKAEAAELEQEYQKLRQAIEAWISLFSEPLYFD-----EDL   78 (201)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-----hhc
Confidence            699999999999999999999999999999999999999999999999999999999999999999999953     222


Q ss_pred             ccccceeEEEEeeEEeeEEeceEEeeecCCCcccccccc
Q psy7193          89 IGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLS  127 (136)
Q Consensus        89 v~~~~~~v~~~~~nvmGV~vP~~~~~~~~~~~y~~~gl~  127 (136)
                       .+ ...|.++.+|||||+||.|+.......+|++.|++
T Consensus        79 -~~-~~~v~~~~~nimGV~vP~~~~~~~~~~~Y~~~~t~  115 (201)
T PRK02195         79 -IK-VKKVEKDYENIAGVEVPILDSIEFEIIEYSLLNTP  115 (201)
T ss_pred             -CC-cceEEEeeeeEeeeeeceeeeeecCCCCcCCccCC
Confidence             34 66999999999999999999977666679998865

>PF01813 ATP-synt_D: ATP synthase subunit D ; InterPro: IPR002699 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=99.94  E-value=7.2e-26  Score=172.88  Aligned_cols=112  Identities=29%  Similarity=0.377  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchhcChhHHHHHHhcccccce
Q psy7193          15 GNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQNIGKAQM   94 (136)
Q Consensus        15 ~~L~~lK~rl~~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A~~~l~~A~~~~G~~~~~~~~~~v~~~~~   94 (136)
                      |||+++|+|+++|++||+|||+|||+|+.+|+++++++.+.++++++.+++||++|..|.+..|.+....++.++ +...
T Consensus         1 m~L~~lk~rl~~a~rg~~lLk~Krd~L~~e~~~~~~~~~~~r~~~~~~~~~a~~~l~~a~~~~g~~~~~~~~~~~-~~~~   79 (196)
T PF01813_consen    1 MELIRLKRRLKLAKRGHKLLKKKRDALIREFRKLIKEAEELREELEELLKEAYFSLALARMSMGEDFVSSVAESV-PESV   79 (196)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-HHHHHHHHTS--S---
T ss_pred             CcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhHHHHHHhcC-CCCc
Confidence            799999999999999999999999999999999999999999999999999999999999998988888888764 4478


Q ss_pred             eEEEEeeEEeeEEeceEEeeec----CCCcccccccc
Q psy7193          95 KLRLTRENIGGVFLTEYEAVEN----GPDVYQIAGLS  127 (136)
Q Consensus        95 ~v~~~~~nvmGV~vP~~~~~~~----~~~~y~~~gl~  127 (136)
                      +|++..+|||||++|.|+....    ..++|++.+++
T Consensus        80 ~v~~~~~ni~GV~vP~~~~~~~~~~~~~~~y~~~~~~  116 (196)
T PF01813_consen   80 EVEVKERNIMGVRVPVLEVKEVRRPFPSPPYGLLGTP  116 (196)
T ss_dssp             EEEEEEEEETTEEEEEEEEE--GGTTS------TT--
T ss_pred             EEEEEEEEEEEEEeceEEeeecccccccccCCcccCC
Confidence            9999999999999999999882    34456555443

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents the D subunit found in V1 and A1 complexes of V- and A-ATPases, respectively. Subunit D appears to be located in the central stalk, whereas subunits E and G form part of the peripheral stalk connecting V1 and V0. This subunit is the most likely homologue to the gamma subunit of the F1 complex in F-ATPases, which undergoes rotation during ATP hydrolysis and serves an essential function in rotary catalysis [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0042626 ATPase activity, coupled to transmembrane movement of substances, 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0033178 proton-transporting two-sector ATPase complex, catalytic domain; PDB: 3A5C_G 3A5D_G 3J0J_G 3AON_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	136
3aon_A	217	V-type sodium ATPase subunit D; V-ATPase, coiled-c	2e-20
3a5c_G	223	V-type ATP synthase subunit D; V-ATPase, asymmetri	2e-16

>3aon_A V-type sodium ATPase subunit D; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae} Length = 217

 Score = 82.1 bits (202), Expect = 2e-20
 Identities = 27/137 (19%), Positives = 51/137 (37%), Gaps = 3/137 (2%)

Query: 2   SDGKDKLPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMAD 61
                +L + P+R   + ++ +L +A RGH LLK K D L  +F  +  K  E R  +  
Sbjct: 4   GSSGMRLNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEK 63

Query: 62  IMREAAIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLT--EYEAVENGPD 119
             + A      AK           +  +    + + +  +NI  V +    ++  E   +
Sbjct: 64  ETQTAMKDFVLAKSTVE-EAFIDELLALPAENVSISVVEKNIMSVKVPLMNFQYDETLNE 122

Query: 120 VYQIAGLSTNGHHLNMM 136
                G   +   L+  
Sbjct: 123 TPLEYGYLHSNAELDRS 139

>3a5c_G V-type ATP synthase subunit D; V-ATPase, asymmetric, rotation, vacuolar type, hydrolase, ATP synthesis, ATP-binding, hydrogen ION transport; HET: ADP; 4.51A {Thermus thermophilus} PDB: 3a5d_G 3j0j_G* Length = 223

 Score = 71.8 bits (175), Expect = 2e-16
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 1/118 (0%)

Query: 10  ILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIA 69
           + P+R N      +L  A++G  LLK+K DAL   F  +  + +E R  +    +EA  A
Sbjct: 4   VSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYAA 63

Query: 70  LSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLS 127
           L  A+                     +    EN+ G  +   +A      +    G  
Sbjct: 64  LLLAQAFDGP-EVVAGAALGVPPLEGVEAEVENVWGSKVPRLKATFPDGALLSPVGTP 120

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	136
3aon_A	217	V-type sodium ATPase subunit D; V-ATPase, coiled-c	100.0
3a5c_G	223	V-type ATP synthase subunit D; V-ATPase, asymmetri	99.97

>3aon_A V-type sodium ATPase subunit D; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}

Probab=100.00  E-value=1.1e-32  Score=212.80  Aligned_cols=124  Identities=24%  Similarity=0.268  Sum_probs=104.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchhcChhHHHHHHh
Q psy7193           8 LPILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQ   87 (136)
Q Consensus         8 ~~V~PTR~~L~~lK~rl~~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A~~~l~~A~~~~G~~~~~~~~~   87 (136)
                      ++|+|||+||+++|+||++|++||+|||+|||+|+++|+++++++.++++++++.+++||++|+.|.+..|.+....++.
T Consensus        10 ~~v~PTR~~L~~lK~rL~~a~rG~~LLk~Krd~L~~ef~~i~~~~~~~r~~~~~~~~~a~~~l~~a~~~~g~~~~~~~~~   89 (217)
T 3aon_A           10 LNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEKETQTAMKDFVLAKSTVEEAFIDELLA   89 (217)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHT
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHh
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999655566665


Q ss_pred             cccccceeEEEEeeEEeeEEeceEEeee----c-CCCcccccccccccccccc
Q psy7193          88 NIGKAQMKLRLTRENIGGVFLTEYEAVE----N-GPDVYQIAGLSTNGHHLNM  135 (136)
Q Consensus        88 ~v~~~~~~v~~~~~nvmGV~vP~~~~~~----~-~~~~y~~~gl~~gg~~i~~  135 (136)
                      + .+...+|+++.+|||||+||.|+...    . ..++|   |+..||+++..
T Consensus        90 ~-~~~~~~v~~~~~nImGV~vP~~~~~~~~~~~~~~~~y---gl~~t~~~ld~  138 (217)
T 3aon_A           90 L-PAENVSISVVEKNIMSVKVPLMNFQYDETLNETPLEY---GYLHSNAELDR  138 (217)
T ss_dssp             S-CSCCCEEEEEEEEETTEEEEEEEEECCGGGTTSCCCC---CCTTCCHHHHH
T ss_pred             C-CCCceEEEEEEEEEEEEEeceEEEEecccccCCcCCc---CcccCCHHHHH
Confidence            5 45578999999999999999999874    1 22345   55666677653

>3a5c_G V-type ATP synthase subunit D; V-ATPase, asymmetric, rotation, vacuolar type, hydrolase, ATP synthesis, ATP-binding, hydrogen ION transport; HET: ADP; 4.51A {Thermus thermophilus} PDB: 3a5d_G 3j0j_G*

Probab=99.97  E-value=1.1e-31  Score=207.99  Aligned_cols=123  Identities=20%  Similarity=0.129  Sum_probs=52.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchhcChhHHHHHHhc
Q psy7193           9 PILPSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRAKFETNAVFNQIVIQN   88 (136)
Q Consensus         9 ~V~PTR~~L~~lK~rl~~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A~~~l~~A~~~~G~~~~~~~~~~   88 (136)
                      +|+||||||+++|+||++|++||+|||+|||+|+++|+++++++.++++++++.+++||++|+.|.+..|.+....++.+
T Consensus         3 ~v~PTR~~L~~lK~rL~~a~rG~~LLk~Krd~L~~ef~~i~~~~~~~r~~~~~~~~~a~~~l~~a~~~~g~~~~~~~~~~   82 (223)
T 3a5c_G            3 QVSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYAALLLAQAFDGPEVVAGAALG   82 (223)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHhc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999996556666555


Q ss_pred             ccccceeEEEEeeEEeeEEeceEEeeecCCCcccccccccccccccc
Q psy7193          89 IGKAQMKLRLTRENIGGVFLTEYEAVENGPDVYQIAGLSTNGHHLNM  135 (136)
Q Consensus        89 v~~~~~~v~~~~~nvmGV~vP~~~~~~~~~~~y~~~gl~~gg~~i~~  135 (136)
                      + +...+|+++.+|||||+||.|+......++|   |+..||+++..
T Consensus        83 ~-~~~~~v~~~~~nImGV~vP~~~~~~~~~~~y---gl~~t~~~ld~  125 (223)
T 3a5c_G           83 V-PPLEGVEAEVENVWGSKVPRLKATFPDGALL---SPVGTPAYTLE  125 (223)
T ss_dssp             -----------------------------------------------
T ss_pred             C-CCCeEEEEEEEEEEEEEeceEEeccCCCCCc---CcccCCHHHHH
Confidence            3 4567999999999999999999873333456   45556677654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00