Psyllid ID: psy733

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
Protein Sequence
LYYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHSLNGSYFYVDPGKAD
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHccccccEEEEEEEEccccHHHHHHHHHHHHHcccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccEHHHHHHHHHHHccEEcccccEEEEEEEEcccccccHHHHHHHHHcccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccc
Coil and Loop (DISEMBL)
LYYTAFigdlashfgcsvglKDAVTAISFVAlgtsvpdtfaSKVSaiqdstadnsvgnvtgsNAVNVFLGLGIAWSLAAIYHSLngsyfyvdpgkad
Flexible Loop (DISEMBL)
LYYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHSLNGSYFYVDPGKAD
Low Complexity Region (SEG)
LYYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHSLNGSYFYVDPGKAD
Disordered region (IsUnstruct)
*YYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQ*****NSVGNVTGSNAVNVFLGLGIAWSLAAIYHSLNGSYFYV******
Disordered Region (DISOPRED)
LYYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHSLNGSYFYVDPGK**
Disordered Region (DISEMBL)
LYYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHSLNGSYFYVDPGKAD
Disordered Region (DISPRO)
LYYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHSLNGSYFYVDP****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
LYYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHSLNGSYFYVDPGKAD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	97	2.2.26 [Sep-21-2011]
P48766	970	Sodium/calcium exchanger	yes	N/A	0.938	0.093	0.780	1e-37
P23685	970	Sodium/calcium exchanger	yes	N/A	0.938	0.093	0.780	1e-37
P48767	970	Sodium/calcium exchanger	N/A	N/A	0.938	0.093	0.780	2e-37
P70414	970	Sodium/calcium exchanger	yes	N/A	0.938	0.093	0.780	2e-37
P32418	973	Sodium/calcium exchanger	yes	N/A	0.938	0.093	0.780	2e-37
Q01728	971	Sodium/calcium exchanger	yes	N/A	0.938	0.093	0.780	2e-37
P48765	970	Sodium/calcium exchanger	yes	N/A	0.938	0.093	0.758	5e-36
P57103	927	Sodium/calcium exchanger	no	N/A	0.938	0.098	0.725	1e-33
P70549	927	Sodium/calcium exchanger	no	N/A	0.938	0.098	0.714	1e-33
P48768	921	Sodium/calcium exchanger	no	N/A	0.938	0.098	0.725	6e-33

>sp|P48766|NAC1_CAVPO Sodium/calcium exchanger 1 OS=Cavia porcellus GN=SLC8A1 PE=2 SV=1

 Score =  154 bits (389), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct: 812 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 871

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct: 872 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 902

Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.
Cavia porcellus (taxid: 10141)

>sp|P23685|NAC1_CANFA Sodium/calcium exchanger 1 OS=Canis familiaris GN=SLC8A1 PE=1 SV=1

 Score =  154 bits (389), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct: 812 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 871

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct: 872 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 902

Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.

Canis familiaris (taxid: 9615)

>sp|P48767|NAC1_FELCA Sodium/calcium exchanger 1 OS=Felis catus GN=SLC8A1 PE=2 SV=1

 Score =  154 bits (389), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct: 812 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 871

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct: 872 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 902

Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.

Felis catus (taxid: 9685)

>sp|P70414|NAC1_MOUSE Sodium/calcium exchanger 1 OS=Mus musculus GN=Slc8a1 PE=1 SV=1

 Score =  154 bits (388), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct: 812 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 871

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct: 872 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 902

Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.

Mus musculus (taxid: 10090)

>sp|P32418|NAC1_HUMAN Sodium/calcium exchanger 1 OS=Homo sapiens GN=SLC8A1 PE=1 SV=3

 Score =  154 bits (388), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct: 815 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 874

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct: 875 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 905

Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.

Homo sapiens (taxid: 9606)

>sp|Q01728|NAC1_RAT Sodium/calcium exchanger 1 OS=Rattus norvegicus GN=Slc8a1 PE=2 SV=3

 Score =  154 bits (388), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct: 813 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 872

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct: 873 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 903

Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.

Rattus norvegicus (taxid: 10116)

>sp|P48765|NAC1_BOVIN Sodium/calcium exchanger 1 OS=Bos taurus GN=SLC8A1 PE=1 SV=1

 Score =  149 bits (376), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 69/91 (75%), Positives = 79/91 (86%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TAFIGDLASHF C++ LKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct: 812 TAFIGDLASHFACTIALKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 871

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct: 872 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 902

Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.

Bos taurus (taxid: 9913)

>sp|P57103|NAC3_HUMAN Sodium/calcium exchanger 3 OS=Homo sapiens GN=SLC8A3 PE=2 SV=2

 Score =  141 bits (356), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/91 (72%), Positives = 78/91 (85%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA IGDLASHFGC++GLKD+VTA+ FVA GTSVPDTFASK +A+QD  AD S+GNVTGSN
Sbjct: 769 TAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAALQDVYADASIGNVTGSN 828

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIY +L G  F+V  G
Sbjct: 829 AVNVFLGIGLAWSVAAIYWALQGQEFHVSAG 859

Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.

Homo sapiens (taxid: 9606)

>sp|P70549|NAC3_RAT Sodium/calcium exchanger 3 OS=Rattus norvegicus GN=Slc8a3 PE=2 SV=1

 Score =  141 bits (355), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 65/91 (71%), Positives = 78/91 (85%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA IGDLASHFGC++GLKD+VTA+ FVA GTSVPDTFASK +A+QD  AD S+GNVTGSN
Sbjct: 769 TAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAALQDVYADASIGNVTGSN 828

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIY ++ G  F+V  G
Sbjct: 829 AVNVFLGIGLAWSVAAIYWAMQGQEFHVSAG 859

Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.

Rattus norvegicus (taxid: 10116)

>sp|P48768|NAC2_RAT Sodium/calcium exchanger 2 OS=Rattus norvegicus GN=Slc8a2 PE=2 SV=1

 Score =  139 bits (350), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 66/91 (72%), Positives = 78/91 (85%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA IGDLASHFGC+VGLKD+V A+ FVALGTS+PDTFASKV+A+QD  AD S+GNVTGSN
Sbjct: 763 TALIGDLASHFGCTVGLKDSVNAVVFVALGTSIPDTFASKVAALQDQCADASIGNVTGSN 822

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLGLG+AWS+AA+Y ++ G  F V  G
Sbjct: 823 AVNVFLGLGVAWSVAAVYWAVQGRPFEVRTG 853

Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
25345082	890	protein C10G8.5 [imported] - Caenorhabdi	0.938	0.102	0.824	8e-37
268566885	947	C. briggsae CBR-NCX-2 protein [Caenorhab	0.938	0.096	0.824	1e-36
308504561	1014	CRE-NCX-2 protein [Caenorhabditis remane	0.938	0.089	0.824	1e-36
312066399	923	solute carrier family 8 [Loa loa]	0.938	0.098	0.780	2e-36
71983546	950	Protein NCX-2, isoform d [Caenorhabditis	0.938	0.095	0.824	2e-36
25154146	925	Protein NCX-2, isoform b [Caenorhabditis	0.938	0.098	0.824	2e-36
2826835	925	sodium-calcium exchanger [Caenorhabditis	0.938	0.098	0.824	2e-36
341886692	975	CBN-NCX-2 protein [Caenorhabditis brenne	0.938	0.093	0.824	2e-36
283436126	941	sodium/calcium exchanger 1 precursor [Or	0.938	0.096	0.780	2e-36
71983528	975	Protein NCX-2, isoform a [Caenorhabditis	0.938	0.093	0.824	2e-36

>gi|25345082|pir||B89047 protein C10G8.5 [imported] - Caenorhabditis elegans

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 75/91 (82%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA +GDLAS FGC VGLKDAVTAISFVALGTSVPDTFASKVSA+QD  ADN+VGNVTGSN
Sbjct: 752 TAVVGDLASQFGCWVGLKDAVTAISFVALGTSVPDTFASKVSAVQDKYADNAVGNVTGSN 811

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+GIAWS+AAIYH   G+ F VDPG
Sbjct: 812 AVNVFLGIGIAWSMAAIYHWNQGTKFLVDPG 842

Source: Caenorhabditis elegans

Species: Caenorhabditis elegans

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

>gi|268566885|ref|XP_002647661.1| C. briggsae CBR-NCX-2 protein [Caenorhabditis briggsae]

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/91 (82%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA +GDLAS FGC VGLKDAVTAISFVALGTSVPDTFASKVSA+QD  ADN+VGNVTGSN
Sbjct: 818 TAVVGDLASQFGCWVGLKDAVTAISFVALGTSVPDTFASKVSAVQDKYADNAVGNVTGSN 877

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+GIAWS+AAIYH   G+ F VDPG
Sbjct: 878 AVNVFLGIGIAWSMAAIYHWNKGTKFLVDPG 908

Source: Caenorhabditis briggsae

Species: Caenorhabditis briggsae

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|308504561|ref|XP_003114464.1| CRE-NCX-2 protein [Caenorhabditis remanei] gi|308261849|gb|EFP05802.1| CRE-NCX-2 protein [Caenorhabditis remanei]

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/91 (82%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA +GDLAS FGC VGLKDAVTAISFVALGTSVPDTFASKVSA+QD  ADN+VGNVTGSN
Sbjct: 856 TAVVGDLASQFGCWVGLKDAVTAISFVALGTSVPDTFASKVSAVQDKYADNAVGNVTGSN 915

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+GIAWS+AAIYH   G+ F VDPG
Sbjct: 916 AVNVFLGIGIAWSMAAIYHWNKGTKFIVDPG 946

Source: Caenorhabditis remanei

Species: Caenorhabditis remanei

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|312066399|ref|XP_003136252.1| solute carrier family 8 [Loa loa]

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/91 (78%), Positives = 82/91 (90%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA IGDLASHFGC VGLKDAVTAISFVALGTS+PDTFASKV+A+QD  AD+S+GNVTGSN
Sbjct: 765 TAVIGDLASHFGCWVGLKDAVTAISFVALGTSIPDTFASKVAAVQDKYADSSIGNVTGSN 824

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
            VNVFLG+GIAW++AA+YH  +G  FYV+PG
Sbjct: 825 GVNVFLGIGIAWTIAAVYHWWHGDNFYVEPG 855

Source: Loa loa

Species: Loa loa

Genus: Loa

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|71983546|ref|NP_001023644.1| Protein NCX-2, isoform d [Caenorhabditis elegans] gi|351050077|emb|CCD64163.1| Protein NCX-2, isoform d [Caenorhabditis elegans]

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 75/91 (82%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA +GDLAS FGC VGLKDAVTAISFVALGTSVPDTFASKVSA+QD  ADN+VGNVTGSN
Sbjct: 817 TAVVGDLASQFGCWVGLKDAVTAISFVALGTSVPDTFASKVSAVQDKYADNAVGNVTGSN 876

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+GIAWS+AAIYH   G+ F VDPG
Sbjct: 877 AVNVFLGIGIAWSMAAIYHWNQGTKFLVDPG 907

Source: Caenorhabditis elegans

Species: Caenorhabditis elegans

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|25154146|ref|NP_504415.2| Protein NCX-2, isoform b [Caenorhabditis elegans] gi|351050075|emb|CCD64161.1| Protein NCX-2, isoform b [Caenorhabditis elegans]

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 75/91 (82%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA +GDLAS FGC VGLKDAVTAISFVALGTSVPDTFASKVSA+QD  ADN+VGNVTGSN
Sbjct: 767 TAVVGDLASQFGCWVGLKDAVTAISFVALGTSVPDTFASKVSAVQDKYADNAVGNVTGSN 826

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+GIAWS+AAIYH   G+ F VDPG
Sbjct: 827 AVNVFLGIGIAWSMAAIYHWNQGTKFLVDPG 857

Source: Caenorhabditis elegans

Species: Caenorhabditis elegans

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|2826835|emb|CAA04574.1| sodium-calcium exchanger [Caenorhabditis elegans]

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 75/91 (82%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA +GDLAS FGC VGLKDAVTAISFVALGTSVPDTFASKVSA+QD  ADN+VGNVTGSN
Sbjct: 767 TAVVGDLASQFGCWVGLKDAVTAISFVALGTSVPDTFASKVSAVQDKYADNAVGNVTGSN 826

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+GIAWS+AAIYH   G+ F VDPG
Sbjct: 827 AVNVFLGIGIAWSMAAIYHWNQGTKFLVDPG 857

Source: Caenorhabditis elegans

Species: Caenorhabditis elegans

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|341886692|gb|EGT42627.1| CBN-NCX-2 protein [Caenorhabditis brenneri]

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 75/91 (82%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA +GDLAS FGC VGLKD+VTAISFVALGTSVPDTFASKVSA+QD  ADN+VGNVTGSN
Sbjct: 817 TAVVGDLASQFGCWVGLKDSVTAISFVALGTSVPDTFASKVSAVQDKYADNAVGNVTGSN 876

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+GIAWS+AAIYH   GS F VDPG
Sbjct: 877 AVNVFLGIGIAWSMAAIYHWNKGSKFLVDPG 907

Source: Caenorhabditis brenneri

Species: Caenorhabditis brenneri

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|283436126|ref|NP_001164429.1| sodium/calcium exchanger 1 precursor [Oryctolagus cuniculus] gi|1279782|gb|AAA97928.1| renal Na/Ca exchanger NACA-2 [Oryctolagus cuniculus]

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/91 (78%), Positives = 82/91 (90%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct: 783 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 842

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIYH+ NG +F V PG
Sbjct: 843 AVNVFLGIGVAWSIAAIYHAANGEHFKVSPG 873

Source: Oryctolagus cuniculus

Species: Oryctolagus cuniculus

Genus: Oryctolagus

Family: Leporidae

Order: Lagomorpha

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|71983528|ref|NP_504414.4| Protein NCX-2, isoform a [Caenorhabditis elegans] gi|351050074|emb|CCD64160.1| Protein NCX-2, isoform a [Caenorhabditis elegans]

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 75/91 (82%), Positives = 81/91 (89%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TA +GDLAS FGC VGLKDAVTAISFVALGTSVPDTFASKVSA+QD  ADN+VGNVTGSN
Sbjct: 817 TAVVGDLASQFGCWVGLKDAVTAISFVALGTSVPDTFASKVSAVQDKYADNAVGNVTGSN 876

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+GIAWS+AAIYH   G+ F VDPG
Sbjct: 877 AVNVFLGIGIAWSMAAIYHWNQGTKFLVDPG 907

Source: Caenorhabditis elegans

Species: Caenorhabditis elegans

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
UNIPROTKB|F1PHW1	335	F1PHW1 "Uncharacterized protei	0.938	0.271	0.780	4e-35
UNIPROTKB|F1PHW2	365	F1PHW2 "Uncharacterized protei	0.938	0.249	0.780	4e-35
UNIPROTKB|A8E655	934	SLC8A1 "SLC8A1 protein" [Bos t	0.938	0.097	0.780	5e-34
UNIPROTKB|F5H5B3	937	SLC8A1 "Sodium/calcium exchang	0.938	0.097	0.780	5e-34
UNIPROTKB|F6VPY9	968	SLC8A1 "Sodium/calcium exchang	0.938	0.094	0.780	5.4e-34
UNIPROTKB|F1MC36	970	SLC8A1 "Sodium/calcium exchang	0.938	0.093	0.780	5.4e-34
UNIPROTKB|P23685	970	SLC8A1 "Sodium/calcium exchang	0.938	0.093	0.780	5.4e-34
UNIPROTKB|P48766	970	SLC8A1 "Sodium/calcium exchang	0.938	0.093	0.780	5.4e-34
MGI|MGI:107956	970	Slc8a1 "solute carrier family	0.938	0.093	0.780	5.4e-34
RGD|3717	971	Slc8a1 "solute carrier family	0.938	0.093	0.780	5.4e-34

UNIPROTKB|F1PHW1 F1PHW1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query:     4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct:   177 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 236

Query:    64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
             AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct:   237 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 267

GO:0016021 "integral to membrane" evidence=IEA

GO:0005432 "calcium:sodium antiporter activity" evidence=IEA

UNIPROTKB|F1PHW2 F1PHW2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query:     4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct:   207 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 266

Query:    64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
             AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct:   267 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 297

GO:0016021 "integral to membrane" evidence=IEA

GO:0005432 "calcium:sodium antiporter activity" evidence=IEA

UNIPROTKB|A8E655 SLC8A1 "SLC8A1 protein" [Bos taurus (taxid:9913)]

 Score = 380 (138.8 bits), Expect = 5.0e-34, P = 5.0e-34
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query:     4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct:   776 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 835

Query:    64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
             AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct:   836 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 866

GO:0016021 "integral to membrane" evidence=IEA

GO:0007154 "cell communication" evidence=IEA

GO:0005432 "calcium:sodium antiporter activity" evidence=IEA

UNIPROTKB|F5H5B3 SLC8A1 "Sodium/calcium exchanger 1" [Homo sapiens (taxid:9606)]

 Score = 380 (138.8 bits), Expect = 5.0e-34, P = 5.0e-34
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query:     4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct:   779 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 838

Query:    64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
             AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct:   839 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 869

GO:0005432 "calcium:sodium antiporter activity" evidence=IEA

GO:0007154 "cell communication" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F6VPY9 SLC8A1 "Sodium/calcium exchanger 1" [Homo sapiens (taxid:9606)]

 Score = 380 (138.8 bits), Expect = 5.4e-34, P = 5.4e-34
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query:     4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct:   810 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 869

Query:    64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
             AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct:   870 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 900

GO:0005432 "calcium:sodium antiporter activity" evidence=IEA

GO:0007154 "cell communication" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1MC36 SLC8A1 "Sodium/calcium exchanger 1" [Bos taurus (taxid:9913)]

 Score = 380 (138.8 bits), Expect = 5.4e-34, P = 5.4e-34
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query:     4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct:   812 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 871

Query:    64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
             AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct:   872 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 902

GO:0071436 "sodium ion export" evidence=IEA

GO:0070509 "calcium ion import" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IEA

GO:0055013 "cardiac muscle cell development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0035050 "embryonic heart tube development" evidence=IEA

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA

GO:0030315 "T-tubule" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0008092 "cytoskeletal protein binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005432 "calcium:sodium antiporter activity" evidence=IEA

GO:0003007 "heart morphogenesis" evidence=IEA

GO:0002026 "regulation of the force of heart contraction" evidence=IEA

GO:0001892 "embryonic placenta development" evidence=IEA

GO:0007154 "cell communication" evidence=IEA

UNIPROTKB|P23685 SLC8A1 "Sodium/calcium exchanger 1" [Canis lupus familiaris (taxid:9615)]

 Score = 380 (138.8 bits), Expect = 5.4e-34, P = 5.4e-34
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query:     4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct:   812 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 871

Query:    64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
             AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct:   872 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 902

GO:0071436 "sodium ion export" evidence=IEA

GO:0070509 "calcium ion import" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IEA

GO:0055013 "cardiac muscle cell development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0035050 "embryonic heart tube development" evidence=IEA

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA

GO:0030315 "T-tubule" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0008092 "cytoskeletal protein binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005432 "calcium:sodium antiporter activity" evidence=IEA

GO:0003007 "heart morphogenesis" evidence=IEA

GO:0002026 "regulation of the force of heart contraction" evidence=IEA

GO:0001892 "embryonic placenta development" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0007154 "cell communication" evidence=IEA

UNIPROTKB|P48766 SLC8A1 "Sodium/calcium exchanger 1" [Cavia porcellus (taxid:10141)]

 Score = 380 (138.8 bits), Expect = 5.4e-34, P = 5.4e-34
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query:     4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct:   812 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 871

Query:    64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
             AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct:   872 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 902

GO:0002026 "regulation of the force of heart contraction" evidence=IC

GO:0006816 "calcium ion transport" evidence=IDA

GO:0014704 "intercalated disc" evidence=IDA

GO:0030018 "Z disc" evidence=IDA

GO:0030315 "T-tubule" evidence=IDA

GO:0042383 "sarcolemma" evidence=IDA

GO:0055074 "calcium ion homeostasis" evidence=IDA

GO:0055119 "relaxation of cardiac muscle" evidence=IC

MGI|MGI:107956 Slc8a1 "solute carrier family 8 (sodium/calcium exchanger), member 1" [Mus musculus (taxid:10090)]

 Score = 380 (138.8 bits), Expect = 5.4e-34, P = 5.4e-34
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query:     4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct:   812 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 871

Query:    64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
             AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct:   872 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 902

GO:0001666 "response to hypoxia" evidence=ISO

GO:0001892 "embryonic placenta development" evidence=IMP

GO:0002026 "regulation of the force of heart contraction" evidence=IMP

GO:0002027 "regulation of heart rate" evidence=IMP

GO:0002028 "regulation of sodium ion transport" evidence=ISO

GO:0003007 "heart morphogenesis" evidence=IGI

GO:0005432 "calcium:sodium antiporter activity" evidence=ISO;IDA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005874 "microtubule" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=ISO;IDA

GO:0006816 "calcium ion transport" evidence=IMP;IDA

GO:0006874 "cellular calcium ion homeostasis" evidence=ISO

GO:0007154 "cell communication" evidence=IEA

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=ISO

GO:0008092 "cytoskeletal protein binding" evidence=ISO

GO:0009791 "post-embryonic development" evidence=IGI

GO:0010763 "positive regulation of fibroblast migration" evidence=ISO

GO:0010881 "regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion" evidence=ISO

GO:0014704 "intercalated disc" evidence=ISO

GO:0014829 "vascular smooth muscle contraction" evidence=IMP

GO:0015297 "antiporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=TAS

GO:0016323 "basolateral plasma membrane" evidence=IDA

GO:0030018 "Z disc" evidence=ISO

GO:0030315 "T-tubule" evidence=ISO;IDA

GO:0030506 "ankyrin binding" evidence=ISO;IPI

GO:0033198 "response to ATP" evidence=ISO

GO:0034614 "cellular response to reactive oxygen species" evidence=ISO

GO:0035050 "embryonic heart tube development" evidence=IMP

GO:0035725 "sodium ion transmembrane transport" evidence=IDA

GO:0042383 "sarcolemma" evidence=ISO;IDA

GO:0042995 "cell projection" evidence=ISO

GO:0043197 "dendritic spine" evidence=ISO

GO:0043198 "dendritic shaft" evidence=ISO

GO:0044325 "ion channel binding" evidence=IPI

GO:0044557 "relaxation of smooth muscle" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IGI

GO:0051481 "reduction of cytosolic calcium ion concentration" evidence=IMP

GO:0051924 "regulation of calcium ion transport" evidence=ISO

GO:0055013 "cardiac muscle cell development" evidence=IMP

GO:0055074 "calcium ion homeostasis" evidence=IMP

GO:0055085 "transmembrane transport" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IGI

GO:0060402 "calcium ion transport into cytosol" evidence=ISO;IMP

GO:0070509 "calcium ion import" evidence=ISO;IMP

GO:0070588 "calcium ion transmembrane transport" evidence=ISO;IDA

GO:0071313 "cellular response to caffeine" evidence=IMP

GO:0071320 "cellular response to cAMP" evidence=ISO

GO:0071436 "sodium ion export" evidence=ISO;IMP

GO:0086064 "cell communication by electrical coupling involved in cardiac conduction" evidence=ISO

RGD|3717 Slc8a1 "solute carrier family 8 (sodium/calcium exchanger), member 1" [Rattus norvegicus (taxid:10116)]

 Score = 380 (138.8 bits), Expect = 5.4e-34, P = 5.4e-34
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query:     4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct:   813 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 872

Query:    64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
             AVNVFLG+G+AWS+AAIYH+ NG  F V PG
Sbjct:   873 AVNVFLGIGVAWSIAAIYHAANGEQFKVSPG 903

GO:0001666 "response to hypoxia" evidence=IDA

GO:0001892 "embryonic placenta development" evidence=IEA;ISO

GO:0002026 "regulation of the force of heart contraction" evidence=IEA;ISO

GO:0002027 "regulation of heart rate" evidence=ISO

GO:0002028 "regulation of sodium ion transport" evidence=IMP

GO:0003007 "heart morphogenesis" evidence=IEA;ISO

GO:0005432 "calcium:sodium antiporter activity" evidence=ISO;IMP;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005874 "microtubule" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005887 "integral to plasma membrane" evidence=IEA;ISO

GO:0006814 "sodium ion transport" evidence=ISO;IDA

GO:0006816 "calcium ion transport" evidence=ISO;TAS

GO:0006874 "cellular calcium ion homeostasis" evidence=IMP

GO:0006950 "response to stress" evidence=IEP

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=IMP

GO:0007584 "response to nutrient" evidence=IEP

GO:0008092 "cytoskeletal protein binding" evidence=IEA;ISO

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0009791 "post-embryonic development" evidence=IEA;ISO

GO:0010763 "positive regulation of fibroblast migration" evidence=IMP

GO:0010881 "regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion" evidence=IDA

GO:0014704 "intercalated disc" evidence=IDA

GO:0014829 "vascular smooth muscle contraction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016323 "basolateral plasma membrane" evidence=IEA;ISO

GO:0021537 "telencephalon development" evidence=IEP

GO:0030018 "Z disc" evidence=IDA

GO:0030315 "T-tubule" evidence=ISO;IDA;TAS

GO:0030506 "ankyrin binding" evidence=ISO

GO:0033198 "response to ATP" evidence=IDA

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA;ISO;IDA

GO:0035050 "embryonic heart tube development" evidence=IEA;ISO

GO:0035725 "sodium ion transmembrane transport" evidence=ISO

GO:0042383 "sarcolemma" evidence=ISO;IDA

GO:0042493 "response to drug" evidence=IEP

GO:0042542 "response to hydrogen peroxide" evidence=IEP

GO:0042995 "cell projection" evidence=IDA

GO:0043197 "dendritic spine" evidence=IDA

GO:0043198 "dendritic shaft" evidence=IDA

GO:0044325 "ion channel binding" evidence=ISO

GO:0044557 "relaxation of smooth muscle" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA;ISO

GO:0051481 "reduction of cytosolic calcium ion concentration" evidence=ISO

GO:0051924 "regulation of calcium ion transport" evidence=IMP

GO:0055013 "cardiac muscle cell development" evidence=IEA;ISO

GO:0055074 "calcium ion homeostasis" evidence=ISO

GO:0060048 "cardiac muscle contraction" evidence=IEA;ISO

GO:0060402 "calcium ion transport into cytosol" evidence=ISO;IDA

GO:0070509 "calcium ion import" evidence=ISO;IDA

GO:0070588 "calcium ion transmembrane transport" evidence=ISO;IMP;IDA

GO:0071313 "cellular response to caffeine" evidence=ISO

GO:0071320 "cellular response to cAMP" evidence=IDA

GO:0071436 "sodium ion export" evidence=ISO;IDA

GO:0086064 "cell communication by electrical coupling involved in cardiac conduction" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P32418	NAC1_HUMAN	No assigned EC number	0.7802	0.9381	0.0935	yes	N/A
Q01728	NAC1_RAT	No assigned EC number	0.7802	0.9381	0.0937	yes	N/A
P70414	NAC1_MOUSE	No assigned EC number	0.7802	0.9381	0.0938	yes	N/A
P48766	NAC1_CAVPO	No assigned EC number	0.7802	0.9381	0.0938	yes	N/A
P48765	NAC1_BOVIN	No assigned EC number	0.7582	0.9381	0.0938	yes	N/A
P23685	NAC1_CANFA	No assigned EC number	0.7802	0.9381	0.0938	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	97
TIGR00845	928	TIGR00845, caca, sodium/calcium exchanger 1	5e-56
pfam01699	135	pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot	6e-16
COG0530	320	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion	1e-06
PRK10734	325	PRK10734, PRK10734, putative calcium/sodium:proton	1e-06
TIGR00367	307	TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang	3e-06
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	1e-05
COG0530	320	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion	6e-05
TIGR00367	307	TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang	1e-04

>gnl|CDD|233149 TIGR00845, caca, sodium/calcium exchanger 1

 Score =  184 bits (470), Expect = 5e-56
 Identities = 71/91 (78%), Positives = 82/91 (90%)

Query: 4   TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
           TAFIGDLASHFGC++GLKD+VTA+ FVALGTSVPDTFASKV+A QD  AD S+GNVTGSN
Sbjct: 770 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSN 829

Query: 64  AVNVFLGLGIAWSLAAIYHSLNGSYFYVDPG 94
           AVNVFLG+G+AWS+AAIYH+ NG+ F V PG
Sbjct: 830 AVNVFLGIGVAWSIAAIYHAANGTQFKVSPG 860

The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]. Length = 928

>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein

 Score = 67.2 bits (165), Expect = 6e-16
 Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 1/89 (1%)

Query: 4  TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSN 63
             + D A      +G+   V  ++ +ALGTS+P+ F+S ++A++ + AD ++GNV GSN
Sbjct: 7  ADLLVDSAESIAEVLGISPTVIGLTLLALGTSLPELFSSIIAALKGN-ADLALGNVIGSN 65

Query: 64 AVNVFLGLGIAWSLAAIYHSLNGSYFYVD 92
            N+ L LG++  ++ I   +  S   +D
Sbjct: 66 LFNILLVLGLSALISPIGLKVLVSPLSLD 94

This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3. Length = 135

>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)

Query: 9   DLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVF 68
           D AS      G+ + +  ++ VA GTS+P+   S V+A+  +  D +VGNV GSN  N+ 
Sbjct: 31  DAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNP-DIAVGNVLGSNIFNIL 89

Query: 69  LGLGI-AWSLAAIYHSL 84
           L LG+ A        S 
Sbjct: 90  LILGLAALIAPLKVDSD 106

Length = 320

>gnl|CDD|182684 PRK10734, PRK10734, putative calcium/sodium:proton antiporter; Provisional

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 11 ASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLG 70
          AS    + G+   +  ++ V +GTS+P+   S V+A      D +VG   GSN  N+ L 
Sbjct: 26 ASILCRTFGIPPLIIGMTVVGIGTSLPEIIVS-VAASLHGQRDLAVGTALGSNITNILLI 84

Query: 71 LGIAWSLAAIYHSL 84
          LG    LAA+    
Sbjct: 85 LG----LAALIRPF 94

Length = 325

>gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%)

Query: 9  DLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVF 68
           +A H G S      +  ++ VA+GTS+P+ F S ++++     D  VGNV GSN  N+ 
Sbjct: 27 RIARHLGIS----PLIIGVTVVAIGTSLPELFTSLIASLMGQP-DIGVGNVIGSNIFNIL 81

Query: 69 LGLGIAWSLAAI 80
          L LG++   + I
Sbjct: 82 LILGLSAIFSPI 93

This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat [Unknown function, General]. Length = 307

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 11   ASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLG 70
            A   G ++G+ + +  ++ +A GTS+PD   S + A +    D +V +  GSN  ++ +G
Sbjct: 956  AHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVA-RKGLGDMAVSSSVGSNIFDITVG 1014

Query: 71   LGIAWSLAAIYHSL 84
            L + W L ++ + L
Sbjct: 1015 LPVPWLLFSLINGL 1028

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

 Score = 39.5 bits (93), Expect = 6e-05
 Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 19  GLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIA 74
           G+ + +  ++ VA+GTS+P+   S + A +    D +VGNV GSN  N+ + LGI+
Sbjct: 206 GISELIIGLTIVAIGTSLPELVVS-IVAARKGEDDIAVGNVIGSNIFNILIVLGIS 260

Length = 320

>gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 17  SVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWS 76
            +G+ + +  ++ +A+GTS+P+     ++A +    D +VGNV GSN  N+ +GLG+   
Sbjct: 199 ILGISEKIIGLTLLAIGTSLPE-LVVSLAAARKGLGDIAVGNVIGSNIFNILVGLGVPSL 257

Query: 77  LAAI 80
              I
Sbjct: 258 FMPI 261

This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat [Unknown function, General]. Length = 307

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	97
KOG1307|consensus	588		99.89
TIGR00845	928	caca sodium/calcium exchanger 1. This model is spe	99.87
PRK10734	325	putative calcium/sodium:proton antiporter; Provisi	99.81
PRK10734	325	putative calcium/sodium:proton antiporter; Provisi	99.81
TIGR00927	1096	2A1904 K+-dependent Na+/Ca+ exchanger.	99.8
COG0530	320	ECM27 Ca2+/Na+ antiporter [Inorganic ion transport	99.79
COG0530	320	ECM27 Ca2+/Na+ antiporter [Inorganic ion transport	99.75
TIGR00367	307	K+-dependent Na+/Ca+ exchanger related-protein. Th	99.74
TIGR00367	307	K+-dependent Na+/Ca+ exchanger related-protein. Th	99.73
TIGR00846	365	caca2 calcium/proton exchanger. This model is gene	99.71
TIGR00927	1096	2A1904 K+-dependent Na+/Ca+ exchanger.	99.68
PF01699	140	Na_Ca_ex: Sodium/calcium exchanger protein; InterP	99.67
TIGR00378	349	cax calcium/proton exchanger (cax).	99.63
KOG1306|consensus	596		99.63
TIGR00846	365	caca2 calcium/proton exchanger. This model is gene	99.58
TIGR00378	349	cax calcium/proton exchanger (cax).	99.56
PLN03151	650	cation/calcium exchanger; Provisional	99.52
KOG1307|consensus	588		99.48
PLN03151	650	cation/calcium exchanger; Provisional	99.45
KOG2399|consensus	605		99.27
TIGR00845	928	caca sodium/calcium exchanger 1. This model is spe	98.9
KOG2399|consensus	605		98.2
PRK10599	366	calcium/sodium:proton antiporter; Provisional	97.57
COG0387	368	ChaA Ca2+/H+ antiporter [Inorganic ion transport a	97.12
KOG1306|consensus	596		97.11
COG0387	368	ChaA Ca2+/H+ antiporter [Inorganic ion transport a	97.09
KOG1397|consensus	441		96.4
KOG1397|consensus	441		95.75

>KOG1307|consensus

Probab=99.89  E-value=5.2e-24  Score=171.84  Aligned_cols=93  Identities=24%  Similarity=0.436  Sum_probs=87.1

Q ss_pred             chhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHH
Q psy733            2 YYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIY   81 (97)
Q Consensus         2 ~~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~   81 (97)
                      .|||+++|+++.+++.+|||+.++|+|++|.|||+||+.++++.+|| |.+|||+++-+|||+|++++++|+||+++.+.
T Consensus       438 ~fSYLMVWwa~~iGeT~gIp~eIMGLTiLAAGTSIPDlitSvIVARK-GlGDMAVSsSiGSNiFDI~VGLplPWLL~~lI  516 (588)
T KOG1307|consen  438 AFSYLMVWWANIIGETLGIPDEIMGLTILAAGTSIPDLITSVIVARK-GLGDMAVSSSIGSNIFDILVGLPLPWLLYTLI  516 (588)
T ss_pred             HHHHHHHHHHHHcccccCCCHHHhhhhhhhcCCchHHhhHhhhhccc-ccccceeecccccchhheeecCCcHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999 99999999999999999999999999999887


Q ss_pred             HhcCCceEEeCCCCC
Q psy733           82 HSLNGSYFYVDPGKA   96 (97)
Q Consensus        82 ~~~~~~~~~i~~~~~   96 (97)
                      ...+++ ..+++++|
T Consensus       517 ~~~~~~-i~vsS~GL  530 (588)
T KOG1307|consen  517 YGFKSK-ISVSSNGL  530 (588)
T ss_pred             hhcCCc-eeecCCce
Confidence            765443 88888775

>TIGR00845 caca sodium/calcium exchanger 1

Probab=99.87  E-value=1.5e-22  Score=173.01  Aligned_cols=95  Identities=75%  Similarity=1.170  Sum_probs=89.7

Q ss_pred             chhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHH
Q psy733            2 YYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIY   81 (97)
Q Consensus         2 ~~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~   81 (97)
                      +.+|.+++.+..+|+.+|+|++++|+|++|+|||+||+++++.|++|+++.||++||++|||+||+++++|++|++.+++
T Consensus       768 ~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~aigNv~GSNifNi~l~lGv~~~i~~~~  847 (928)
T TIGR00845       768 VLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIY  847 (928)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCceeEEeecchHHHHHHHHHHHHHHHhhhh
Confidence            46899999999999999999999999999999999999999999999445999999999999999999999999999999


Q ss_pred             HhcCCceEEeCCCCC
Q psy733           82 HSLNGSYFYVDPGKA   96 (97)
Q Consensus        82 ~~~~~~~~~i~~~~~   96 (97)
                      +..++.++++++..+
T Consensus       848 ~~~~~~~~~V~~~~l  862 (928)
T TIGR00845       848 HAANGTQFKVSPGTL  862 (928)
T ss_pred             hcccCceEEECccch
Confidence            988999999998765

This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family

>PRK10734 putative calcium/sodium:proton antiporter; Provisional

Probab=99.81  E-value=3e-20  Score=143.93  Aligned_cols=78  Identities=26%  Similarity=0.368  Sum_probs=74.0

Q ss_pred             hhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHHH
Q psy733            4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYH   82 (97)
Q Consensus         4 ~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~~   82 (97)
                      +-+++++++.+++++|+|+.++|+|++|+|||+||+++++.|+++ |++|+++||++|||+||+++++|++++++|+..
T Consensus        19 a~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~-g~~~ia~GnilGSni~ni~lilg~~~l~~~~~~   96 (325)
T PRK10734         19 ADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLH-GQRDLAVGTALGSNITNILLILGLAALIRPFTV   96 (325)
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHc-CCCcchhhhhhhHHHHHHHHHHHHHHHhCCccc
Confidence            567899999999999999999999999999999999999999999 999999999999999999999999999987643

>PRK10734 putative calcium/sodium:proton antiporter; Provisional

Probab=99.81  E-value=3.9e-20  Score=143.31  Aligned_cols=77  Identities=25%  Similarity=0.377  Sum_probs=74.3

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAI   80 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i   80 (97)
                      -+++++++++.+++.+|+||.++|+|++|+|||+||+++++.++|| |+.|+++||++|||+||+++++|+++++.|.
T Consensus       189 gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslPE~~~sv~a~~~-g~~~~avgniiGsnifni~~~lg~~~l~~~~  265 (325)
T PRK10734        189 ATRMVIDNATVLANYFAISELTIGLTVIAIGTSLPELATAIAGARK-GENDIAVGNIIGSNIFNIVIVLGLPALISPG  265 (325)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHHHHHHHHHHHHc-CCCchHHHHHHhHHHHHHHHHHHHHHhhccc
Confidence            3788999999999999999999999999999999999999999999 9999999999999999999999999999775

>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger

Probab=99.80  E-value=3.9e-20  Score=158.39  Aligned_cols=92  Identities=23%  Similarity=0.409  Sum_probs=84.7

Q ss_pred             chhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHH
Q psy733            2 YYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIY   81 (97)
Q Consensus         2 ~~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~   81 (97)
                      .++|+++|++..+++.+|||+.++|+|++|+|||+||+++++.++++ |++|||++|++|||+||+++++|++|++....
T Consensus       947 i~SyilV~~at~IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArk-G~gdMAVan~iGSNIFnIllgLGlPWlI~~li 1025 (1096)
T TIGR00927       947 MFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARK-GLGDMAVSSSVGSNIFDITVGLPVPWLLFSLI 1025 (1096)
T ss_pred             HHHHHHHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHc-cCCcceeeeccccchheeeeeccHHHHHHHHh
Confidence            57999999999999999999999999999999999999999999999 99999999999999999999999999998876


Q ss_pred             HhcCCceEEeCCCCC
Q psy733           82 HSLNGSYFYVDPGKA   96 (97)
Q Consensus        82 ~~~~~~~~~i~~~~~   96 (97)
                      +  ...++.++++.|
T Consensus      1026 ~--g~~pV~V~S~GL 1038 (1096)
T TIGR00927      1026 N--GLQPVPVSSNGL 1038 (1096)
T ss_pred             c--cCcceeecCccH
Confidence            4  345677877653

>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

Probab=99.79  E-value=1.6e-19  Score=140.06  Aligned_cols=77  Identities=32%  Similarity=0.484  Sum_probs=74.5

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAI   80 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i   80 (97)
                      -+.++++++..+++.+|+||.++|+|++|+|||+||+++++.++|| |+.|+++||++|||+||+++++|++.++.|+
T Consensus       190 g~~llv~~~~~iA~~~gi~e~~igltivaigTSlPElv~si~a~rk-g~~~iavGnviGSni~n~~~~lGi~~~~~~~  266 (320)
T COG0530         190 GSELLVDGAVEIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARK-GEDDIAVGNVIGSNIFNILIVLGISALIGPI  266 (320)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcccHHHHHHHHHHHc-CCCCeEEeeecchHHHHHHHHHhHHHhcccc
Confidence            4678999999999999999999999999999999999999999999 9999999999999999999999999999883

>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

Probab=99.75  E-value=5.5e-18  Score=131.46  Aligned_cols=81  Identities=33%  Similarity=0.497  Sum_probs=76.7

Q ss_pred             hhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHHHh
Q psy733            4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHS   83 (97)
Q Consensus         4 ~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~~~   83 (97)
                      +-.++++++.+++++|+|+.++|.|++|+|||+||+.++..|+.+ |++|+++||++|||++|+++++|+..+++|...+
T Consensus        26 ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~-g~~~iavGnvlGSni~ni~li~gl~ali~~~~~~  104 (320)
T COG0530          26 ADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALS-GNPDIAVGNVLGSNIFNILLILGLAALIAPLKVD  104 (320)
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHc-CCCCeeeehhhhHHHHHHHHHHHHHHHHhhhHhh
Confidence            457899999999999999999999999999999999999999999 9999999999999999999999999999998775


Q ss_pred             cC
Q psy733           84 LN   85 (97)
Q Consensus        84 ~~   85 (97)
                      .+
T Consensus       105 ~~  106 (320)
T COG0530         105 SD  106 (320)
T ss_pred             hh
Confidence            43

>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein

Probab=99.74  E-value=3.5e-18  Score=131.03  Aligned_cols=78  Identities=28%  Similarity=0.479  Sum_probs=73.9

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIY   81 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~   81 (97)
                      -+..++++++.+++++|+|+.+.|+|++|+|||+||+++++.++++ |++|+++||++|||+||+++++|++.+++|+.
T Consensus        17 ~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~-g~~~la~g~ilGS~l~n~l~i~g~~~l~~~~~   94 (307)
T TIGR00367        17 GADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLI-GQPDIGVGNVIGSNIFNILLILGLSAIFSPII   94 (307)
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhc-CCCCeehhhhhhHHHHHHHHHHHHHHhhccee
Confidence            3567899999999999999999999999999999999999999999 99999999999999999999999999988653

This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.

>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein

Probab=99.73  E-value=5.4e-18  Score=129.94  Aligned_cols=78  Identities=29%  Similarity=0.478  Sum_probs=74.9

Q ss_pred             chhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHH
Q psy733            2 YYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAI   80 (97)
Q Consensus         2 ~~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i   80 (97)
                      +.++.+++.++.+++.+|+|+.++|+|++|+|||+||+++++.++|+ |+.|+++||++|||+||+++++|+++++.|+
T Consensus       184 ~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~PE~~~~i~a~~~-g~~~~avg~~iGs~i~~~~~~~g~~~~~~~~  261 (307)
T TIGR00367       184 VGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLPELVVSVAAARK-GLGDIAVGNVIGSNIFNILVGLGVPSLFYPI  261 (307)
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHHc-CCCchHHHHHhhhHHHHHHHHHHHHHHhccc
Confidence            35788999999999999999999999999999999999999999999 9999999999999999999999999999885

This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.

>TIGR00846 caca2 calcium/proton exchanger

Probab=99.71  E-value=1.7e-17  Score=130.26  Aligned_cols=77  Identities=14%  Similarity=0.153  Sum_probs=74.5

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAI   80 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i   80 (97)
                      .+.+++++++.+++++|+|+.++|+|++++|||+||+++++.+++| |+.|+++||++|||+||+++++|+..++.++
T Consensus       236 ~a~~lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~-g~~~lavg~~iGSni~n~l~vl~~~~li~~~  312 (365)
T TIGR00846       236 LAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFK-NKLDIALGVALGSALQIALFVVPVVVLVAWM  312 (365)
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHc-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4788999999999999999999999999999999999999999999 9999999999999999999999999999876

This model is generated from the calcium ion/proton exchangers of the CacA family.

>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger

Probab=99.68  E-value=1.8e-17  Score=142.17  Aligned_cols=88  Identities=16%  Similarity=0.290  Sum_probs=77.2

Q ss_pred             hhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHHHh
Q psy733            4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHS   83 (97)
Q Consensus         4 ~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~~~   83 (97)
                      +-+++.++..|++++++|+.++|+|++|+|||+||+++++.+++. ++.|+++||++|||+||+++++|++.++.+....
T Consensus       476 dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiAv~~-g~sDIGVGNIVGSnIFNILLVLGl~aLis~~~l~  554 (1096)
T TIGR00927       476 DEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFI-SHSNVGIGTIVGSAVFNILFVIGTCALFSREILN  554 (1096)
T ss_pred             HHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHHHHc-CCCcceehhhHhHHHHHHHHHHhhheeecccccc
Confidence            357889999999999999999999999999999999999999999 8999999999999999999999999988765332


Q ss_pred             cCCceEEeCCC
Q psy733           84 LNGSYFYVDPG   94 (97)
Q Consensus        84 ~~~~~~~i~~~   94 (97)
                        -+++.+-||
T Consensus       555 --Ld~~~L~RD  563 (1096)
T TIGR00927       555 --LTWWPLFRD  563 (1096)
T ss_pred             --ccccceehh
Confidence              234555554

>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins

Probab=99.67  E-value=2.2e-17  Score=111.02  Aligned_cols=80  Identities=23%  Similarity=0.392  Sum_probs=72.3

Q ss_pred             chhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHH
Q psy733            2 YYTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIY   81 (97)
Q Consensus         2 ~~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~   81 (97)
                      +.++.+++..+.+++++|+|+.++|+++++++||+||+++++.++++ |++++++|+++|||++|++++.|+++++.+..
T Consensus         5 ~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~-g~~~la~~~~~Gs~~~~~~l~~gl~~l~~~~~   83 (140)
T PF01699_consen    5 VAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARK-GNPDLAIGNIIGSNIFNITLIVGLILLFGPIK   83 (140)
T ss_dssp             HHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCT-T-CHHHHHHHHHHHHHHHHTHHHHHHHHS-B-
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhc-cccchhhhcccchHHHHHHHHHHHHHHhcccc
Confidence            35788999999999999999999999999999999999999999999 99999999999999999999999999998875


Q ss_pred             H
Q psy733           82 H   82 (97)
Q Consensus        82 ~   82 (97)
                      .
T Consensus        84 ~   84 (140)
T PF01699_consen   84 L   84 (140)
T ss_dssp             -
T ss_pred             c
Confidence            4

This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.

>TIGR00378 cax calcium/proton exchanger (cax)

Probab=99.63  E-value=3.5e-16  Score=122.08  Aligned_cols=77  Identities=16%  Similarity=0.264  Sum_probs=73.4

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYH   82 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~~   82 (97)
                      .+++++++++++++++|  +.+.|+|..++|| +||+++++.|+++ |++|++.||++|||++|+++++|++.+++|+++
T Consensus        32 la~~l~~~~~~lA~~~g--~~vggl~~~~~gt-~pEL~vsi~A~~~-g~~~i~~gnivGS~i~NllLilGls~liggl~~  107 (349)
T TIGR00378        32 LAAIMGNATEELADKAG--PTIGGLLNATFGN-AVELIVSIIALKE-GLVRIVQASLTGSLLGNLLLVLGLCFFFGGLNY  107 (349)
T ss_pred             HHHHHHHHHHHHHHHcC--chHHHHHHHhhcc-HHHHHHHHHHHHc-CChhhhHHHHHHHHHHhHHHHHHHHHHHhcccc
Confidence            46889999999999999  8999999999999 9999999999999 999999999999999999999999999999965


Q ss_pred             h
Q psy733           83 S   83 (97)
Q Consensus        83 ~   83 (97)
                      +
T Consensus       108 ~  108 (349)
T TIGR00378       108 K  108 (349)
T ss_pred             c
Confidence            4

>KOG1306|consensus

Probab=99.63  E-value=5.3e-17  Score=132.01  Aligned_cols=95  Identities=72%  Similarity=1.134  Sum_probs=90.5

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYH   82 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~~   82 (97)
                      .+.++.|.++.++|..|+.+++..+|++|+|||+||.+++.+|+.+.-..|-++||+-|||..|+++++|++|.++.+|+
T Consensus       441 ~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~AD~~igNvTgSNaVNvflGiG~aW~iaavy~  520 (596)
T KOG1306|consen  441 LTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQTADASIGNVTGSNAVNVFLGIGLAWSIAAVYW  520 (596)
T ss_pred             HHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhcccccccccceecccceeEEEeccHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999775679999999999999999999999999999999


Q ss_pred             hcCCceEEeCCCCCC
Q psy733           83 SLNGSYFYVDPGKAD   97 (97)
Q Consensus        83 ~~~~~~~~i~~~~~~   97 (97)
                      ..++++|+++..+|+
T Consensus       521 a~~g~~f~v~~g~l~  535 (596)
T KOG1306|consen  521 AAQGEPFYVEAGTLA  535 (596)
T ss_pred             HhcCceEEeccceee
Confidence            999999999998874

>TIGR00846 caca2 calcium/proton exchanger

Probab=99.58  E-value=1.5e-15  Score=119.35  Aligned_cols=76  Identities=14%  Similarity=0.100  Sum_probs=70.9

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYH   82 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~~   82 (97)
                      -+.+++++++.+++++|++   +|.+++|.+||+||+++++.|+.+ |++|++.||++|||++|+++++|++.+++|+.+
T Consensus        50 ~a~~lv~~a~~lA~~~G~~---vG~ll~a~~ts~pEL~vsi~A~~~-g~~~la~gnivGS~i~NilLIlGl~~l~~~~~~  125 (365)
T TIGR00846        50 LAERVSFATEQLAHRLGPT---LGGLLNATFGNAVELIISLMALGE-GKVEVVRASLLGSILSNLLLVLGLSLFLGGIKN  125 (365)
T ss_pred             HHHHHHHHHHHHHHHhCCc---hhhHHHHHHhHHHHHHHHHHHccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence            3678999999999999988   666677999999999999999999 999999999999999999999999999999865

This model is generated from the calcium ion/proton exchangers of the CacA family.

>TIGR00378 cax calcium/proton exchanger (cax)

Probab=99.56  E-value=9e-15  Score=114.15  Aligned_cols=76  Identities=12%  Similarity=0.142  Sum_probs=70.6

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAA   79 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~   79 (97)
                      .+.+++++++.+++.+|+|+.++|+|+++++||+||.++++.+++| |+.|+++||++|||++|.+++.++..+++-
T Consensus       220 ~a~~lv~~~~~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~~-~~~~~ai~~~~GS~i~~~l~v~p~lvl~~~  295 (349)
T TIGR00378       220 CSEFLVGTIDNVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAMK-DKMDLALGVAIGSSLQIALFVAPVLVIVGW  295 (349)
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHc-CCcccHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999999999999 999999999999999999988887555543

>PLN03151 cation/calcium exchanger; Provisional

Probab=99.52  E-value=4.8e-14  Score=117.97  Aligned_cols=74  Identities=18%  Similarity=0.288  Sum_probs=67.7

Q ss_pred             hhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHH
Q psy733            5 AFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLA   78 (97)
Q Consensus         5 ~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~   78 (97)
                      -+++.+.+.+++++++||.+.|+|++|+|||.||+++++.+...+++.++++|+++||++||+++++|+..++.
T Consensus       160 dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig~ilGs~lf~~~vV~G~v~l~~  233 (650)
T PLN03151        160 DYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLNSVLGGAVFVTCVVVGIVSLCV  233 (650)
T ss_pred             HHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeeehhhhHHHHHHHHHHHHHHHhc
Confidence            35678899999999999999999999999999999999988765368899999999999999999999988864

>KOG1307|consensus

Probab=99.48  E-value=8.5e-15  Score=118.83  Aligned_cols=86  Identities=21%  Similarity=0.347  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHHHhcCC
Q psy733            7 IGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHSLNG   86 (97)
Q Consensus         7 l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~~~~~~   86 (97)
                      .|-+.+.|.+++++|+.+.|+|++|.|+|.||+++++..+.- -+.|+++|.|+||..||++.++|+|.+++.-  -.+-
T Consensus        79 FVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVFI-t~~dVGiGTIVGSAvFNIL~Vig~C~LFSrq--vl~L  155 (588)
T KOG1307|consen   79 FVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGVFI-TQGDVGIGTIVGSAVFNILCVIGVCGLFSRQ--VLNL  155 (588)
T ss_pred             ccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeEEE-ecCCcceeeeeehhhhhHHHHHHHHHhhccc--cccc
Confidence            456789999999999999999999999999999999999988 8999999999999999999999999999633  2356


Q ss_pred             ceEEeCCCC
Q psy733           87 SYFYVDPGK   95 (97)
Q Consensus        87 ~~~~i~~~~   95 (97)
                      .||++=||.
T Consensus       156 tWWPLfRD~  164 (588)
T KOG1307|consen  156 TWWPLFRDV  164 (588)
T ss_pred             ccchhhhhh
Confidence            788888774

>PLN03151 cation/calcium exchanger; Provisional

Probab=99.45  E-value=2.4e-13  Score=113.82  Aligned_cols=89  Identities=18%  Similarity=0.296  Sum_probs=76.8

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCC--CceeccccchhHHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTA--DNSVGNVTGSNAVNVFLGLGIAWSLAAI   80 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~--~lavg~iiGSn~~ni~~~lGl~~l~~~i   80 (97)
                      .++-+++..+.+|..+|+|++++|+|++|+|+|+||++++++-+|+ |.+  .||+++++|+++||+++++|++++++..
T Consensus       499 ~a~elv~~l~~iG~i~~is~~~lglTvlA~gnsi~Dlian~~lA~~-G~~~m~mA~~a~~ggp~F~il~glG~~~~~~~~  577 (650)
T PLN03151        499 IANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMN-GGDGVQIAMSGCYAGPMFNTLVGLGMSMLLGAW  577 (650)
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccHHHHHHHHHHHHc-CCchhHHHHHHhhhhhHHHHHHhccHHHHHHHh
Confidence            4677899999999999999999999999999999999999999999 865  5788899999999999999999999776


Q ss_pred             HHhcCCceEEeCCC
Q psy733           81 YHSLNGSYFYVDPG   94 (97)
Q Consensus        81 ~~~~~~~~~~i~~~   94 (97)
                      ..+  +.++.+..+
T Consensus       578 ~~~--~~~~~~~~~  589 (650)
T PLN03151        578 SKS--PESYMLPED  589 (650)
T ss_pred             hcC--CCceeecCC
Confidence            443  333555433

>KOG2399|consensus

Probab=99.27  E-value=1.2e-11  Score=103.07  Aligned_cols=77  Identities=19%  Similarity=0.344  Sum_probs=71.8

Q ss_pred             hHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHHHh
Q psy733            6 FIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHS   83 (97)
Q Consensus         6 ~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~~~   83 (97)
                      =++.-.+.++..+|+|++++|+|++|+|+|+.|++++++.+++ |.+.||+++++|+..||+++++|++.++......
T Consensus       465 Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLIAniavak~-G~p~MAmaac~GGplfn~lvg~G~~~~i~~~~~~  541 (605)
T KOG2399|consen  465 ELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLIANIAVAKQ-GYPRMAMAACIGGPLFNLLVGLGLPLVISSLQGK  541 (605)
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHHHHHHHHHc-CcHHHHHHHHhhhHHHHHHHHhhHHHHHHHHhcC
Confidence            3566778899999999999999999999999999999999999 9999999999999999999999999999887554

>TIGR00845 caca sodium/calcium exchanger 1

Probab=98.90  E-value=3.5e-10  Score=97.77  Aligned_cols=60  Identities=23%  Similarity=0.405  Sum_probs=54.5

Q ss_pred             CChhHHHHHHHhhcCChHHHHHHHHHHHhcCC---CCceeccccchhHHHHHHHHHHHHHHHHH
Q psy733           20 LKDAVTAISFVALGTSVPDTFASKVSAIQDST---ADNSVGNVTGSNAVNVFLGLGIAWSLAAI   80 (97)
Q Consensus        20 is~~v~G~tllA~gtSlPEl~~~~~aa~~~g~---~~lavg~iiGSn~~ni~~~lGl~~l~~~i   80 (97)
                      +++++.|+|++|+|+|.||+++++++... ++   +|+++|.++||.+||++++.|+|.+.-|-
T Consensus       127 ~~~tvag~t~~A~gssaPe~~~s~~~~~~-~~~~~g~lg~gtivGsa~Fn~~vi~~~~~~~~p~  189 (928)
T TIGR00845       127 WNETVSNLTLMALGSSAPEILLSVIEVCG-HNFEAGDLGPSTIVGSAAFNMFIIIAICVYVIPD  189 (928)
T ss_pred             CCcccccceeeeccCCchHHHHHHHHHhc-cCCccccccccceehhHHHHHHhhheeEEEeccC
Confidence            59999999999999999999999999876 44   59999999999999999999998876553

This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family

>KOG2399|consensus

Probab=98.20  E-value=3.4e-08  Score=82.58  Aligned_cols=71  Identities=20%  Similarity=0.308  Sum_probs=64.1

Q ss_pred             HHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHH
Q psy733            9 DLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAA   79 (97)
Q Consensus         9 ~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~   79 (97)
                      .+.+.++..++++|++.|+|++|+||+.||++.++++.+....+|+++++++|+..|...+++|+-.+.+|
T Consensus       128 psL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~~~~~~~~lg~alFVt~~V~G~i~~t~p  198 (605)
T KOG2399|consen  128 PSLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKGDLALNDLLGGALFVTTVVVGLIILTKP  198 (605)
T ss_pred             hHHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCcccHHHHHhccceeEEeeEeeeeeeecc
Confidence            45678899999999999999999999999999999998775566999999999999999999998777766

>PRK10599 calcium/sodium:proton antiporter; Provisional

Probab=97.57  E-value=0.00028  Score=56.24  Aligned_cols=75  Identities=15%  Similarity=0.093  Sum_probs=64.0

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAA   79 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~   79 (97)
                      .|-.++...+...+.+|+|+.++|+.+ ++--..||-.+++.+++| ++-|.+++-++||...-+++..+.-.+++-
T Consensus       237 lAe~lv~sIe~~v~~~Glp~afiGvII-aiv~~apE~~tAV~aA~k-Nkmq~slnialGSsLq~illtvP~lvlig~  311 (366)
T PRK10599        237 VTKMNASPLETLLTSMNAPVAFTGFLV-ALLILSPEGLGALKAVLN-NQVQRAMNLFFGSVLATISLTVPVVTLIAF  311 (366)
T ss_pred             HHHHhHhhHHHHHHhcCCCHHHHHHHH-HHHHcchhHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            467889999999999999999999887 555568999999999999 999999999999998877776665444443

>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]

Probab=97.12  E-value=0.0015  Score=52.25  Aligned_cols=69  Identities=16%  Similarity=0.167  Sum_probs=62.0

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLG   72 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lG   72 (97)
                      .+.+++...+...+.+|.|+.++|+++.++---.||..+++.++++ |+-|.+++=..||...-.++..+
T Consensus       236 lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~-~~mqls~nia~Gsalq~~lltiP  304 (368)
T COG0387         236 LAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALN-NRMQLSMNIAMGSALQTALLTIP  304 (368)
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH
Confidence            5678899999999999999999999999999889999999999999 99999999999998766655444

>KOG1306|consensus

Probab=97.11  E-value=0.00021  Score=59.26  Aligned_cols=59  Identities=24%  Similarity=0.424  Sum_probs=50.3

Q ss_pred             CChhHHHHHHHhhcCChHHHHHHHHHHHhcCC--CCceeccccchhHHHHHHHHHHHHHHH
Q psy733           20 LKDAVTAISFVALGTSVPDTFASKVSAIQDST--ADNSVGNVTGSNAVNVFLGLGIAWSLA   78 (97)
Q Consensus        20 is~~v~G~tllA~gtSlPEl~~~~~aa~~~g~--~~lavg~iiGSn~~ni~~~lGl~~l~~   78 (97)
                      .++++--+|++|+|+|.||+..+++-.-+++.  .|++-|.++||..||++.+.++|...-
T Consensus        80 WNeTVsnltLmAlGsSaPEIlLSiIe~~gn~f~agdLGPgTIVGSAAfnlF~iiAVCv~vi  140 (596)
T KOG1306|consen   80 WNETVSNLTLMALGSSAPEILLSIIEFCGNEFQAGDLGPGTIVGSAAFNLFEIIAVCVRVI  140 (596)
T ss_pred             echhhHHHHHhhcccCcchhhHHHHHHhcccccccCcCCceEechhhhhhhhheEEEEEEc
Confidence            46889999999999999999999988755232  589999999999999999998876553

>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]

Probab=97.09  E-value=0.0011  Score=52.90  Aligned_cols=78  Identities=15%  Similarity=0.124  Sum_probs=65.3

Q ss_pred             hhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHHHh
Q psy733            4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIYHS   83 (97)
Q Consensus         4 ~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~~~   83 (97)
                      ++.+++.+++++.|.|-+  + |..+.+.--..=|+.....+.++ |++.+.-+.+.||-.-|++.++|++.++..+++.
T Consensus        50 A~~v~~aaE~lA~~vG~~--~-G~Lina~f~~~iEvil~~~al~~-G~~~lvr~Si~gsIm~~~llv~GlslllGglr~~  125 (368)
T COG0387          50 AFSVVRAAEVLAARVGEP--Y-GSLINALFGNAIEVILIVAALKS-GSPTLVRDSLYGSIMINLLLVVGLSLLLGGLRHK  125 (368)
T ss_pred             HHHHHHHHHHHHHHhCCc--h-hHHHHHHHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHHHHHHHHHcchhhc
Confidence            678999999999997754  4 44455555555599999988888 8999999999999999999999999999999775


Q ss_pred             cC
Q psy733           84 LN   85 (97)
Q Consensus        84 ~~   85 (97)
                      .+
T Consensus       126 ~Q  127 (368)
T COG0387         126 TQ  127 (368)
T ss_pred             ee
Confidence            43

>KOG1397|consensus

Probab=96.40  E-value=0.013  Score=47.58  Aligned_cols=74  Identities=16%  Similarity=0.223  Sum_probs=62.3

Q ss_pred             hhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHH
Q psy733            4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIY   81 (97)
Q Consensus         4 ~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~   81 (97)
                      ++.+..+.++++.++|.  ++-|+.=.-+||.. |++.++.|-++ |+..+.-+..+||-.-|+++++|++.+...+.
T Consensus       110 A~~l~~ateqls~~tg~--tvGgllNAtfGnai-Elii~ilALk~-g~~riVq~SlLGSILsnlLLvlG~s~~~Ggi~  183 (441)
T KOG1397|consen  110 AERLGFATEQLSAYTGP--TVGGLLNATFGNAI-ELIIYILALKN-GKVRIVQGSLLGSILSNLLLVLGLSLFCGGIR  183 (441)
T ss_pred             HHHHHHHHHHHHhhcCC--cHHHHHhhhhccHH-HHHHHHHHhhc-CceEEEehhhHHHHHHHHHHHhhHHHhhcccc
Confidence            57788999999999874  45555444456555 99999999999 99999999999999999999999999998885

>KOG1397|consensus

Probab=95.75  E-value=0.0055  Score=49.74  Aligned_cols=70  Identities=14%  Similarity=0.164  Sum_probs=61.8

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGI   73 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl   73 (97)
                      .+-++|+..+...+.+++|..++|++++++--..-|-+.++.-+.| ++-|+++|-.+||.+.--++..+.
T Consensus       305 laeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k-~kldLslgVaigsalQI~Lf~vP~  374 (441)
T KOG1397|consen  305 LAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMK-DKLDLSLGVAIGSALQIALFVVPF  374 (441)
T ss_pred             HHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeec-CcccchhhhhhhhhHhHHHhhhhH
Confidence            4667899999999999999999999999998888899999999999 999999999999988655544443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	97
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	1e-07
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	2e-07

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 9   DLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVF 68
            +A     S    D V   + VA GTS+P+   S  +A ++      +GNV GSN  ++ 
Sbjct: 188 KIALALDIS----DKVIGFTLVAFGTSLPELMVSLAAAKRNL-GGMVLGNVIGSNIADIG 242

Query: 69  LGLGIA 74
             L + 
Sbjct: 243 GALAVG 248

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 11 ASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLG 70
          +        + + V   + +A+GTS+P+   S  ++   +    S+GN  GS   N+ L 
Sbjct: 27 SERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAP-GISIGNAIGSCICNIGLV 85

Query: 71 LGIA 74
          LG++
Sbjct: 86 LGLS 89

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	97
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	99.78
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	99.74

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A*

Probab=99.78  E-value=4.1e-20  Score=141.88  Aligned_cols=77  Identities=22%  Similarity=0.319  Sum_probs=73.9

Q ss_pred             hhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHHH
Q psy733            4 TAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAIY   81 (97)
Q Consensus         4 ~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i~   81 (97)
                      +.+++++++.+++++|+||.++|+|++|+|||+||+++++.|+++ |++|+++||++|||+||+++++|++++++|+.
T Consensus        20 a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~~-g~~diaiGnivGSni~nillvlG~~~li~p~~   96 (320)
T 3v5u_A           20 SDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYM-HAPGISIGNAIGSCICNIGLVLGLSAIISPII   96 (320)
T ss_dssp             HHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTHHHHHHHHSCBC
T ss_pred             HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHhC-CCCceeeeeecchHHHHHHHHHHHHHHHcccc
Confidence            567899999999999999999999999999999999999999999 99999999999999999999999999998764

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A*

Probab=99.74  E-value=5.2e-19  Score=135.71  Aligned_cols=77  Identities=25%  Similarity=0.341  Sum_probs=73.9

Q ss_pred             hhhhHHHHHHHHHHHhCCChhHHHHHHHhhcCChHHHHHHHHHHHhcCCCCceeccccchhHHHHHHHHHHHHHHHHH
Q psy733            3 YTAFIGDLASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFLGLGIAWSLAAI   80 (97)
Q Consensus         3 ~~~~l~~~a~~i~~~~gis~~v~G~tllA~gtSlPEl~~~~~aa~~~g~~~lavg~iiGSn~~ni~~~lGl~~l~~~i   80 (97)
                      -+++++++++.+++.+|+|+.++|+|++|+|||+||+++++.++|| |+.|+++||++|||+||+++++|+++++.|+
T Consensus       178 ~a~~lv~~~~~ia~~~gis~~~iGltlva~gtslPE~~~sv~aa~~-g~~~laig~iiGS~ifn~~~v~g~~~li~p~  254 (320)
T 3v5u_A          178 GAELFVDGAKKIALALDISDKVIGFTLVAFGTSLPELMVSLAAAKR-NLGGMVLGNVIGSNIADIGGALAVGSLFMHL  254 (320)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCHHHHHHTHHHHHTHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTHHHHHHHHSCB
T ss_pred             HHHhccccHHHHHHHhCCchHHHHHHHHHHHhccHHHHHHHHHHHc-CCCcHHHHHHHhHHHHHHHHHHHHHHhhccc
Confidence            4788999999999999999999999999999999999999999999 9999999999999999999999999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00