Psyllid ID: psy7349

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------
Protein Sequence
MRNPFSGTSKPEDETTSTKPVFGDKMNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mrnpfsgtskpedettstkpvfgdkmnsvsKECTQLKHQYDECFQTWFTEkflkgdtddsmcspLLKVYQSCVQNCLI
Flexible Loop (DISEMBL)
mrnpfsgtskpedettstkpvfgdkMNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQscvqncli
Low Complexity Region (SEG)
MRNPFSGTSKPEDETTSTKPVFGDKMNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI
Disordered region (IsUnstruct)
********************************CTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL*
Disordered Region (DISOPRED)
*******************************ECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI
Disordered Region (DISEMBL)
*****************TKPVFGDKMNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI
Disordered Region (DISPRO)
**************************NSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRNPFSGTSKPEDETTSTKPVFGDKMNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	78	2.2.26 [Sep-21-2011]
Q6DD38	78	TP53-regulated inhibitor	N/A	N/A	0.666	0.666	0.519	3e-11
O43715	76	TP53-regulated inhibitor	yes	N/A	0.666	0.684	0.538	3e-11
Q9D8Z2	76	TP53-regulated inhibitor	yes	N/A	0.666	0.684	0.538	4e-11
A9ULB4	78	TP53-regulated inhibitor	yes	N/A	0.666	0.666	0.5	2e-10
Q6INR6	78	TP53-regulated inhibitor	N/A	N/A	0.666	0.666	0.5	3e-10
Q96VG1	69	Uncharacterized protein C	yes	N/A	0.653	0.739	0.470	3e-07
O60200	86	Mitochondrial distributio	yes	N/A	0.653	0.593	0.450	3e-07
Q9SMZ9	92	Uncharacterized protein A	yes	N/A	0.576	0.489	0.377	0.0007

>sp|Q6DD38|TRIAB_XENLA TP53-regulated inhibitor of apoptosis 1-B OS=Xenopus laevis GN=triap1-b PE=3 SV=1

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 35/52 (67%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNSV +ECT +K +YD+CF  WF EKFLKGD     C+ L + Y+ CVQ  +
Sbjct: 1  MNSVGEECTDMKREYDQCFNRWFAEKFLKGDGSGDPCTELFRRYRECVQKAI 52

Mediates cell survival by inhibiting activation of caspase-9 which prevents induction of apoptosis. Required for pronephros development; probably involved at an early stage in the formation of pronephric components derived from the somatic layer.
Xenopus laevis (taxid: 8355)

>sp|O43715|TRIA1_HUMAN TP53-regulated inhibitor of apoptosis 1 OS=Homo sapiens GN=TRIAP1 PE=1 SV=1

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 35/52 (67%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNSV + CT +K +YD+CF  WF EKFLKGD+    C+ L K YQ CVQ  +
Sbjct: 1  MNSVGEACTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAI 52

Mediates cell survival by inhibiting activation of caspase-9 which prevents induction of apoptosis.

Homo sapiens (taxid: 9606)

>sp|Q9D8Z2|TRIA1_MOUSE TP53-regulated inhibitor of apoptosis 1 OS=Mus musculus GN=Triap1 PE=2 SV=1

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 34/52 (65%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNSV + CT +K +YD+CF  WF EKFLKGD     C+ L K YQ CVQ  +
Sbjct: 1  MNSVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAI 52

Mediates cell survival by inhibiting activation of caspase-9 which prevents induction of apoptosis.

Mus musculus (taxid: 10090)

>sp|A9ULB4|TRIA1_XENTR TP53-regulated inhibitor of apoptosis 1 OS=Xenopus tropicalis GN=triap1 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 35/52 (67%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNSV +ECT +K +YD+CF  WF EKFLKG+     C+ L + Y+ CVQ  +
Sbjct: 1  MNSVGEECTDMKREYDQCFNRWFAEKFLKGECSGDPCTELFRRYRDCVQKAI 52

Mediates cell survival by inhibiting activation of caspase-9 which prevents induction of apoptosis (By similarity). Required for pronephros development; probably involved at an early stage in the formation of pronephric components derived from the somatic layer.

Xenopus tropicalis (taxid: 8364)

>sp|Q6INR6|TRIAA_XENLA TP53-regulated inhibitor of apoptosis 1-A OS=Xenopus laevis GN=triap1-a PE=3 SV=1

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 33/52 (63%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNSV +ECT +K  YD+CF  WF EKFLKG      C+ L + Y+ CVQ  +
Sbjct: 1  MNSVGEECTDMKRDYDQCFNRWFAEKFLKGAGSGDPCTELFRRYRECVQKAI 52

Mediates cell survival by inhibiting activation of caspase-9 which prevents induction of apoptosis. Required for pronephros development; probably involved at an early stage in the formation of pronephric components derived from the somatic layer.

Xenopus laevis (taxid: 8355)

>sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.18 PE=3 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 31/51 (60%)

Query: 27 NSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          +SVS+ECT  K +YD CF  W+  KFLKGD  +  C  L   Y+SC+   L
Sbjct: 3  SSVSEECTPAKKKYDACFNDWYANKFLKGDLHNRDCDELFAEYKSCLLKAL 53

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|O60200|MDM35_YEAST Mitochondrial distribution and morphology protein 35 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MDM35 PE=1 SV=3

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 28 SVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI 78
          S + ECT LK +YD CF  W++EKFLKG + ++ CS     Y +CV   L+
Sbjct: 8  SFAPECTDLKTKYDSCFNEWYSEKFLKGKSVENECSKQWYAYTTCVNAALV 58

Involved in mitochondrial distribution and morphology. Mediates the import of UPS1, UPS2 and UPS3, 3 atypical mitochondrial intermembrane space (IMS) proteins lacking the two major IMS-targeting signals, into the intermembrane space.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q9SMZ9|Y4331_ARATH Uncharacterized protein At4g33100 OS=Arabidopsis thaliana GN=At4g33100 PE=3 SV=1

 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 24/45 (53%)

Query: 33 CTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          C  L++ Y  CF  W++EKF+KG  D   C    K Y+ C+   L
Sbjct: 19 CADLRNAYHNCFNKWYSEKFVKGQWDKEECVAEWKKYRDCLSENL 63

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
389609933	81	similar to CG30108 [Papilio xuthus]	0.666	0.641	0.615	2e-13
119115730	81	AGAP003988-PA [Anopheles gambiae str. PE	0.666	0.641	0.615	2e-13
195122976	92	GI18793 [Drosophila mojavensis] gi|19391	0.666	0.565	0.576	2e-13
357626149	81	hypothetical protein KGM_12913 [Danaus p	0.666	0.641	0.576	3e-13
195382286	90	GJ21823 [Drosophila virilis] gi|19414465	0.666	0.577	0.576	3e-13
170039009	81	conserved hypothetical protein [Culex qu	0.666	0.641	0.596	6e-13
157124096	83	hypothetical protein AaeL_AAEL009759 [Ae	0.666	0.626	0.576	6e-13
194755817	87	GF11660 [Drosophila ananassae] gi|190621	0.666	0.597	0.557	8e-13
195154992	86	GL16788 [Drosophila persimilis] gi|19411	0.666	0.604	0.557	1e-12
195028750	94	GH20078 [Drosophila grimshawi] gi|193903	0.666	0.553	0.557	1e-12

>gi|389609933|dbj|BAM18578.1| similar to CG30108 [Papilio xuthus]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 43/52 (82%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNS+ +ECT LK +YD+CF +WF+E+FLKGD DDS+CS + KVYQ CV+N +
Sbjct: 1  MNSIGEECTDLKKKYDDCFNSWFSERFLKGDHDDSVCSSIFKVYQDCVKNAM 52

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|119115730|ref|XP_318438.3| AGAP003988-PA [Anopheles gambiae str. PEST] gi|116119523|gb|EAA13625.3| AGAP003988-PA [Anopheles gambiae str. PEST]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 41/52 (78%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNS+ + CTQLK  YD CF  WF+++FLKGDTDDS+C+PL KVYQ CV+  +
Sbjct: 1  MNSIGENCTQLKKDYDNCFNNWFSDRFLKGDTDDSLCAPLFKVYQQCVKEAM 52

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195122976|ref|XP_002005986.1| GI18793 [Drosophila mojavensis] gi|193911054|gb|EDW09921.1| GI18793 [Drosophila mojavensis]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 41/52 (78%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNS+  +C +LK QYD CF  WF+E+FLKG+TDDS+C+P+ KVYQ CV+  +
Sbjct: 1  MNSIGDDCNELKKQYDACFNNWFSERFLKGETDDSVCAPIFKVYQECVKRAM 52

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357626149|gb|EHJ76344.1| hypothetical protein KGM_12913 [Danaus plexippus]

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 43/52 (82%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNS+ +ECT+LK +YD+CF +WF+E+FLKGD DDSMC+ + K+YQ CV+  +
Sbjct: 1  MNSIGEECTELKQKYDDCFNSWFSERFLKGDHDDSMCAGIFKIYQECVKKAM 52

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195382286|ref|XP_002049861.1| GJ21823 [Drosophila virilis] gi|194144658|gb|EDW61054.1| GJ21823 [Drosophila virilis]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 41/52 (78%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNS+  +C +LK QYD CF  WF+E+FLKG+TDDS+C+P+ KVYQ CV+  +
Sbjct: 1  MNSIGDDCNELKKQYDACFNNWFSERFLKGETDDSVCAPIFKVYQECVKRAM 52

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170039009|ref|XP_001847339.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167862617|gb|EDS26000.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 42/52 (80%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNS+   CT+LK +YD CF  WF+E+FL+GDTDDS+C+PL KVYQ CV++ +
Sbjct: 1  MNSIGDNCTELKKKYDTCFNQWFSEQFLRGDTDDSVCAPLFKVYQQCVKDAM 52

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157124096|ref|XP_001660329.1| hypothetical protein AaeL_AAEL009759 [Aedes aegypti] gi|108874114|gb|EAT38339.1| AAEL009759-PA [Aedes aegypti]

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 42/52 (80%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNS+ + CT+LK +YD CF  WF+E+FLKGD DDS+C+PL +VYQ CV++ +
Sbjct: 1  MNSIGENCTELKKKYDSCFNQWFSERFLKGDADDSVCAPLFQVYQQCVKDAM 52

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194755817|ref|XP_001960176.1| GF11660 [Drosophila ananassae] gi|190621474|gb|EDV36998.1| GF11660 [Drosophila ananassae]

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 41/52 (78%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNS+ ++C +LK QYD CF +WF+E+FLKG TDDS C+P+ +VYQ CV+  +
Sbjct: 1  MNSIGEDCNELKKQYDACFNSWFSERFLKGQTDDSACAPIFRVYQECVKRAM 52

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195154992|ref|XP_002018391.1| GL16788 [Drosophila persimilis] gi|194114187|gb|EDW36230.1| GL16788 [Drosophila persimilis]

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 41/52 (78%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNS+ +EC +LK QYD CF +WF+E+FLKG TD+S C+P+ +VYQ CV+  +
Sbjct: 1  MNSIGEECNELKKQYDACFNSWFSERFLKGHTDESACAPIFRVYQDCVKRAM 52

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195028750|ref|XP_001987239.1| GH20078 [Drosophila grimshawi] gi|193903239|gb|EDW02106.1| GH20078 [Drosophila grimshawi]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 40/52 (76%)

Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          MNS+  +C +LK QYD CF  WF+E+FLKG T+DS+C+P+ KVYQ CV+  +
Sbjct: 1  MNSIGDDCNELKKQYDACFNNWFSERFLKGQTNDSVCAPIFKVYQECVKRAM 52

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
FB|FBgn0050109	88	CG30109 [Drosophila melanogast	0.666	0.590	0.557	1.4e-14
FB|FBgn0050108	88	CG30108 [Drosophila melanogast	0.666	0.590	0.538	3e-14
UNIPROTKB|E1C3C0	76	TRIAP1 "Uncharacterized protei	0.666	0.684	0.557	4.4e-13
UNIPROTKB|O43715	76	TRIAP1 "TP53-regulated inhibit	0.666	0.684	0.538	7.1e-13
UNIPROTKB|Q0P5E1	76	TRIAP1 "TP53 regulated inhibit	0.666	0.684	0.538	1.5e-12
MGI|MGI:1916326	76	Triap1 "TP53 regulated inhibit	0.666	0.684	0.538	1.5e-12
RGD|1586233	76	Triap1 "TP53 regulated inhibit	0.666	0.684	0.538	1.5e-12
UNIPROTKB|Q6DD38	78	triap1-b "TP53-regulated inhib	0.666	0.666	0.519	1.9e-12
UNIPROTKB|A9ULB4	78	triap1 "TP53-regulated inhibit	0.666	0.666	0.5	3.9e-12
UNIPROTKB|F1RJI8	78	TRIAP1 "Uncharacterized protei	0.666	0.666	0.519	5e-12

FB|FBgn0050109 CG30109 [Drosophila melanogaster (taxid:7227)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 29/52 (55%), Positives = 40/52 (76%)

Query:    26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
             MNS+ ++C +LK QYD CF +WF+E FLKG TDDS C+P+ +VYQ CV+  +
Sbjct:     1 MNSIGEDCNELKKQYDACFNSWFSEGFLKGQTDDSGCAPIFRVYQECVKRAM 52

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0050108 CG30108 [Drosophila melanogaster (taxid:7227)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 28/52 (53%), Positives = 40/52 (76%)

Query:    26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
             M+SV ++C +LK QYD CF +WF+E+FLKG  DDS C+P+ +VYQ CV+  +
Sbjct:     1 MSSVGEDCNELKQQYDACFNSWFSERFLKGQMDDSACAPIFRVYQECVKRAI 52

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|E1C3C0 TRIAP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 29/52 (55%), Positives = 35/52 (67%)

Query:    26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
             MNSV + CT+LK +YD+CF  WF EKFLKG+ D   C  L K YQ CVQ  +
Sbjct:     1 MNSVGEACTELKREYDQCFNRWFAEKFLKGENDGDPCGQLFKRYQLCVQKAI 52

GO:0005739 "mitochondrion" evidence=IEA

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

UNIPROTKB|O43715 TRIAP1 "TP53-regulated inhibitor of apoptosis 1" [Homo sapiens (taxid:9606)]

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 28/52 (53%), Positives = 35/52 (67%)

Query:    26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
             MNSV + CT +K +YD+CF  WF EKFLKGD+    C+ L K YQ CVQ  +
Sbjct:     1 MNSVGEACTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAI 52

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=IEP

GO:0005739 "mitochondrion" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0006977 "DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest" evidence=TAS

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=IDA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IDA

UNIPROTKB|Q0P5E1 TRIAP1 "TP53 regulated inhibitor of apoptosis 1" [Bos taurus (taxid:9913)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 28/52 (53%), Positives = 34/52 (65%)

Query:    26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
             MNSV + CT +K +YD+CF  WF EKFLKGD     C+ L K YQ CVQ  +
Sbjct:     1 MNSVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAI 52

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=IEA

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

MGI|MGI:1916326 Triap1 "TP53 regulated inhibitor of apoptosis 1" [Mus musculus (taxid:10090)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 28/52 (53%), Positives = 34/52 (65%)

Query:    26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
             MNSV + CT +K +YD+CF  WF EKFLKGD     C+ L K YQ CVQ  +
Sbjct:     1 MNSVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAI 52

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0006915 "apoptotic process" evidence=IEA

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

RGD|1586233 Triap1 "TP53 regulated inhibitor of apoptosis 1" [Rattus norvegicus (taxid:10116)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 28/52 (53%), Positives = 34/52 (65%)

Query:    26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
             MNSV + CT +K +YD+CF  WF EKFLKGD     C+ L K YQ CVQ  +
Sbjct:     1 MNSVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAI 52

GO:0005739 "mitochondrion" evidence=ISO

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=ISO

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

UNIPROTKB|Q6DD38 triap1-b "TP53-regulated inhibitor of apoptosis 1-B" [Xenopus laevis (taxid:8355)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 27/52 (51%), Positives = 35/52 (67%)

Query:    26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
             MNSV +ECT +K +YD+CF  WF EKFLKGD     C+ L + Y+ CVQ  +
Sbjct:     1 MNSVGEECTDMKREYDQCFNRWFAEKFLKGDGSGDPCTELFRRYRECVQKAI 52

GO:0005739 "mitochondrion" evidence=ISS

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISS

GO:0048793 "pronephros development" evidence=ISS

UNIPROTKB|A9ULB4 triap1 "TP53-regulated inhibitor of apoptosis 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 26/52 (50%), Positives = 35/52 (67%)

Query:    26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
             MNSV +ECT +K +YD+CF  WF EKFLKG+     C+ L + Y+ CVQ  +
Sbjct:     1 MNSVGEECTDMKREYDQCFNRWFAEKFLKGECSGDPCTELFRRYRDCVQKAI 52

GO:0005739 "mitochondrion" evidence=ISS

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISS

GO:0048793 "pronephros development" evidence=IMP

UNIPROTKB|F1RJI8 TRIAP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 27/52 (51%), Positives = 34/52 (65%)

Query:    26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
             MNSV + CT +K +YD+CF  WF EKFLKG+     C+ L K YQ CVQ  +
Sbjct:     1 MNSVGEGCTDMKREYDQCFNRWFAEKFLKGEGSGDPCTDLFKRYQQCVQKAI 52

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=IEA

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A9ULB4	TRIA1_XENTR	No assigned EC number	0.5	0.6666	0.6666	yes	N/A
Q96VG1	YBAI_SCHPO	No assigned EC number	0.4705	0.6538	0.7391	yes	N/A
O43715	TRIA1_HUMAN	No assigned EC number	0.5384	0.6666	0.6842	yes	N/A
Q9D8Z2	TRIA1_MOUSE	No assigned EC number	0.5384	0.6666	0.6842	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	78
pfam05254	68	pfam05254, UPF0203, Uncharacterized protein family	3e-18
PLN03079	91	PLN03079, PLN03079, Uncharacterized protein At4g33	2e-06

>gnl|CDD|147448 pfam05254, UPF0203, Uncharacterized protein family (UPF0203)

 Score = 70.8 bits (174), Expect = 3e-18
 Identities = 26/50 (52%), Positives = 38/50 (76%)

Query: 28 SVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          S + ECT+LK +YD+CF  W++EKFLKGD+ ++ C+ L + YQ+CVQ  L
Sbjct: 4  SFAPECTELKEKYDKCFNKWYSEKFLKGDSTENECTELFEKYQTCVQKAL 53

This family of proteins is functionally uncharacterized. Length = 68

>gnl|CDD|178628 PLN03079, PLN03079, Uncharacterized protein At4g33100; Provisional

 Score = 41.5 bits (97), Expect = 2e-06
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 28 SVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
          S +  C +L+  Y  CF  W++EKF+KG  D   C      Y++C+   L
Sbjct: 13 SSTSPCAELRTAYHNCFNRWYSEKFVKGQWDKEDCVAEWHKYRACLSEHL 62

Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	78
PF05254	68	UPF0203: Uncharacterised protein family (UPF0203);	99.97
KOG3481|consensus	87		99.96
PLN03079	91	Uncharacterized protein At4g33100; Provisional	99.95
PF02320	65	UCR_hinge: Ubiquinol-cytochrome C reductase hinge	95.8
PF05051	49	COX17: Cytochrome C oxidase copper chaperone (COX1	93.5
PF06747	35	CHCH: CHCH domain; InterPro: IPR010625 A conserved	90.95

>PF05254 UPF0203: Uncharacterised protein family (UPF0203); InterPro: IPR007918 This is a family of small highly conserved proteins

Probab=99.97  E-value=1.5e-31  Score=167.90  Aligned_cols=53  Identities=57%  Similarity=1.146  Sum_probs=51.4

Q ss_pred             cc-cchHHhHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHHhhC
Q psy7349          26 MN-SVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI   78 (78)
Q Consensus        26 M~-S~~~eCt~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~kaLk   78 (78)
                      |+ |++|+|++||++||+|||+||+|+||+|++.+++|+++|++||+||++||+
T Consensus         1 M~~S~~~eC~~lK~~YD~CFn~WfsekfLkG~~~~~~C~~~~~~Y~~Cv~~al~   54 (68)
T PF05254_consen    1 MSASLAPECTELKEKYDQCFNKWFSEKFLKGDSSDNECGELFKEYQQCVQKALK   54 (68)
T ss_pred             CCcchhhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            77 999999999999999999999999999999999999999999999999985

In Saccharomyces cerevisiae (Baker's yeast) the gene YKL053C-A (MDM35) O60200 from SWISSPROT is one of the genes essential for maintenance of normal mitochondrial distribution and morphology (MDM) []; wherease in Homo sapiens (Human), p53CSV, O43715 from SWISSPROT is a direct transcriptional target for p53 and appears to be a cell-survival mediator in response to genotoxic stress including low-levels of DNA damage. It is suggested that p53CSV modulates the apoptotic pathway through interaction with HSP70 and Apaf-1 thereby inhibiting activation of procaspase-3 and procaspase-9 [].

>KOG3481|consensus

Probab=99.96  E-value=5.7e-30  Score=168.03  Aligned_cols=56  Identities=57%  Similarity=1.115  Sum_probs=53.2

Q ss_pred             ccccc-cchHHhHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHHhhC
Q psy7349          23 GDKMN-SVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI   78 (78)
Q Consensus        23 ~~~M~-S~~~eCt~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~kaLk   78 (78)
                      +|+|+ |++|+|++||.+||+|||+||+|+||||+++.++|..||+.|++||++||+
T Consensus         2 ~d~mssSv~~eCt~lk~~YD~CFn~Wf~eKflKG~~~~~pC~~l~k~Y~~Cv~kal~   58 (87)
T KOG3481|consen    2 SDRMSSSVFPECTDLKQKYDQCFNEWFSEKFLKGDSSGEPCSRLFKVYKQCVQKALK   58 (87)
T ss_pred             CccccccccccchHHHHHHHHHHHHHHHHHhcCCccccCcHHHHHHHHHHHHHHHHh
Confidence            46666 999999999999999999999999999999999999999999999999985

>PLN03079 Uncharacterized protein At4g33100; Provisional

Probab=99.95  E-value=1e-28  Score=163.27  Aligned_cols=52  Identities=33%  Similarity=0.818  Sum_probs=49.3

Q ss_pred             ccchHHhHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHHhhC
Q psy7349          27 NSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI   78 (78)
Q Consensus        27 ~S~~~eCt~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~kaLk   78 (78)
                      .|++++|++||++||+|||+||+|+||||++.+++|+++|++||+||++||+
T Consensus        12 ~~~g~eCtelK~~YD~CFN~WYsEkFLKG~~~~~eC~~~w~~Yq~Cv~~aL~   63 (91)
T PLN03079         12 RSSTSPCAELRTAYHNCFNRWYSEKFVKGQWDKEDCVAEWHKYRACLSEHLE   63 (91)
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhhhcCCcccchHHHHHHHHHHHHHHHHH
Confidence            4667889999999999999999999999999999999999999999999985

>PF02320 UCR_hinge: Ubiquinol-cytochrome C reductase hinge protein; InterPro: IPR023184 The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex []

Probab=95.80  E-value=0.043  Score=34.06  Aligned_cols=42  Identities=26%  Similarity=0.529  Sum_probs=33.8

Q ss_pred             chHHhHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHH
Q psy7349          29 VSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQN   75 (78)
Q Consensus        29 ~~~eCt~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~k   75 (78)
                      ..+.|..+++.|+.|-.+==+     +......|.++|-.|..||..
T Consensus        13 ~~~~C~~~~~~y~~C~eRV~~-----~~~~~e~C~ee~fd~~hCvD~   54 (65)
T PF02320_consen   13 ETPKCAKLKHHYDECVERVNS-----RSETKEDCVEEYFDLVHCVDH   54 (65)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHH-----CSSSSG-SHHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHhc-----CCCCCCCcHHHHHHHHHHHHH
Confidence            468899999999999877554     444566799999999999975

The bc1 complex contains 11 subunits; 3 respiratory subunits (cytochrome B, cytochrome C1, Rieske protein), 2 core proteins and 6 low molecular weight proteins. This family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c complex. Proteins in this entry from an alpha-helical hairpin. This entry represents the structural domain found in these proteins.; PDB: 1BCC_H 1SQP_H 1SQB_H 1BE3_H 2A06_U 1L0L_H 2BCC_H 2FYU_H 1PPJ_U 2YBB_H ....

>PF05051 COX17: Cytochrome C oxidase copper chaperone (COX17); InterPro: IPR007745 Cox17p is essential for the assembly of functional cytochrome c oxidase (CCO) and for delivery of copper ions to the mitochondrion for insertion into the enzyme in Saccharomyces cerevisiae []

Probab=93.50  E-value=0.27  Score=29.51  Aligned_cols=34  Identities=26%  Similarity=0.710  Sum_probs=27.7

Q ss_pred             HhHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHH
Q psy7349          32 ECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQN   75 (78)
Q Consensus        32 eCt~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~k   75 (78)
                      .|-+-|++=|.|+-.       .|..   .|.++.++|++|+..
T Consensus        11 aCpetK~aRDeC~l~-------~g~e---~C~~~Ieahk~Cmr~   44 (49)
T PF05051_consen   11 ACPETKKARDECILF-------NGEE---DCKELIEAHKACMRG   44 (49)
T ss_dssp             TSHHHHHHHHHHHHH-------C-CC---CCHHHHHHHHHHHHH
T ss_pred             cChhHHHHhHhhHHh-------cChH---HHHHHHHHHHHHHHH
Confidence            589999999999865       3443   399999999999975

; GO: 0005507 copper ion binding, 0016531 copper chaperone activity, 0006825 copper ion transport, 0005758 mitochondrial intermembrane space; PDB: 1U97_A 1U96_A 1Z2G_A 2RNB_A 2RN9_A 2LGQ_A 2L0Y_B.

>PF06747 CHCH: CHCH domain; InterPro: IPR010625 A conserved motif was identified in the LOC118487 protein was called the CHCH motif

Probab=90.95  E-value=0.48  Score=24.89  Aligned_cols=35  Identities=26%  Similarity=0.497  Sum_probs=25.2

Q ss_pred             hHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHH
Q psy7349          33 CTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQN   75 (78)
Q Consensus        33 Ct~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~k   75 (78)
                      |.+....|=+|+...=        .+...|.++++.|++|+++
T Consensus         1 C~~e~~~~~~Cl~~n~--------~~~~~C~~~~~~~~~C~~~   35 (35)
T PF06747_consen    1 CAEEMKAYLACLKENN--------FDWSKCRKEFKAYKECRMK   35 (35)
T ss_dssp             THHHHHHHHHHHHCH---------SSTCCCHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHCC--------CcHHhhHHHHHHHHHHhhC
Confidence            5666777777765432        1356799999999999864

Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11 kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation []. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit []. The CHCH domain was previously called DUF657 []. ; PDB: 2ZXT_A 3A3C_A 2L0Y_A 2K3J_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	78
1pp9_H	78	Ubiquinol-cytochrome C reductase complex 11 kDa P;	93.99
3tgu_H	77	Mitochondrial ubiquinol-cytochrome C reductase 11	93.78
3cx5_F	146	Cytochrome B-C1 complex subunit 6; complex III, el	90.72
1u96_A	69	Cytochrome C oxidase copper chaperone; metallochap	87.13

>1pp9_H Ubiquinol-cytochrome C reductase complex 11 kDa P; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.28.1.1 PDB: 1bgy_H* 1be3_H* 1l0n_H* 1ntk_H* 1ntm_H* 1ntz_H* 1nu1_H* 1l0l_H* 1ppj_H* 1sqb_H* 1sqp_H* 1sqq_H* 1sqv_H* 1sqx_H* 2a06_H* 2fyu_H* 2ybb_H* 1bcc_H* 2bcc_H* 3bcc_H* ...

Probab=93.99  E-value=0.18  Score=31.45  Aligned_cols=40  Identities=13%  Similarity=0.354  Sum_probs=32.3

Q ss_pred             HHhHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHH
Q psy7349          31 KECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQN   75 (78)
Q Consensus        31 ~eCt~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~k   75 (78)
                      +.|..+++.|+.|-.+==+    +++. ...|...|=.|..||..
T Consensus        28 ~~C~~~~~~y~~C~eRV~s----~~~~-~e~C~ee~fd~~hCvD~   67 (78)
T 1pp9_H           28 EKCVKARERLELCDERVSS----RSQT-EEDCTEELLDFLHARDH   67 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHT----CSSC-SCCSHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHhc----CCCC-CCCcHHHHHHHHHHHHH
Confidence            7889999999999988654    2333 44599999999999975

>3tgu_H Mitochondrial ubiquinol-cytochrome C reductase 11 protein, complex III subunit VIII...; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_H* 3h1i_H* 3h1h_H* 3h1k_H* 3h1l_H* 3h1j_H* 3l71_H* 3l72_H* 3l73_H* 3l74_H* 3l75_H* 3l70_H*

Probab=93.78  E-value=0.21  Score=31.11  Aligned_cols=40  Identities=10%  Similarity=0.301  Sum_probs=32.4

Q ss_pred             HHhHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHH
Q psy7349          31 KECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQN   75 (78)
Q Consensus        31 ~eCt~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~k   75 (78)
                      +.|.++++.|+.|-.+==+.    .+ ....|..+|=.|..||..
T Consensus        27 ~~C~~~~~~y~~C~eRV~~~----~~-~~e~C~eE~Fd~~hCvD~   66 (77)
T 3tgu_H           27 EKCVKARERLELCDARVSSR----SH-TEEQCTEELFDFLHARDH   66 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC----SS-CCCCSHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhcC----CC-CCCCcHHHHHHHHHHHHH
Confidence            67999999999999886652    23 345699999999999875

>3cx5_F Cytochrome B-C1 complex subunit 6; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.28.1.1 PDB: 3cxh_F* 1ezv_H* 1kb9_F* 1p84_F* 2ibz_H* 1kyo_F*

Probab=90.72  E-value=0.75  Score=31.92  Aligned_cols=46  Identities=20%  Similarity=0.285  Sum_probs=32.8

Q ss_pred             HHhHHHHHHHHHHHHHHHhhcccCC---CCCCCCCHHHHHHHHHHHHHh
Q psy7349          31 KECTQLKHQYDECFQTWFTEKFLKG---DTDDSMCSPLLKVYQSCVQNC   76 (78)
Q Consensus        31 ~eCt~lK~~YD~CFn~WfsEkFLkG---~~~~~~C~~lf~~Yq~Cv~ka   76 (78)
                      +.|.++++.|+.|-.+==+..=-.|   ......|...|=.|..||..-
T Consensus        88 ~~C~~~~~~ydeCveRV~s~~e~~G~~~~~~~EdC~eE~Fdl~hCvD~C  136 (146)
T 3cx5_F           88 EEGKALVHHYEECAERVKIQQQQPGYADLEHKEDCVEEFFHLQHYLDTA  136 (146)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSTTGGGCCSCCCCHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHccccccccccCCCCcccHHHHHHHHhhHhhc
Confidence            6788999999999988743110012   112445999999999999753

>1u96_A Cytochrome C oxidase copper chaperone; metallochaperone, unstructured N-terminus, two alpha- helices; NMR {Saccharomyces cerevisiae} SCOP: a.17.1.2 PDB: 1u97_A 1z2g_A

Probab=87.13  E-value=0.51  Score=29.24  Aligned_cols=37  Identities=22%  Similarity=0.637  Sum_probs=30.1

Q ss_pred             HHhHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHH
Q psy7349          31 KECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQN   75 (78)
Q Consensus        31 ~eCt~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~k   75 (78)
                      =.|-+-|+.=|.|+-.       .|..+. .|.++-++|++|+..
T Consensus        24 CaCpetK~aRDeCil~-------~gee~~-~C~~lIeahk~CMr~   60 (69)
T 1u96_A           24 CVCKPEKEERDTCILF-------NGQDSE-KCKEFIEKYKECMKG   60 (69)
T ss_dssp             TTSSHHHHHHHHHHHH-------SCSCSG-GGHHHHHHHHHHHHT
T ss_pred             eeCcchhhHHHHHHHh-------cCCcHH-HHHHHHHHHHHHHHH
Confidence            3689999999999852       366554 699999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	78
d1ppjh_	66	Non-heme 11 kDa protein of cytochrome bc1 complex	94.6
d1u97a_	69	Cytochrome C oxidase copper chaperone, COX17 {Bake	92.28
d3cx5f1	74	Non-heme 11 kDa protein of cytochrome bc1 complex	91.37

>d1ppjh_ f.28.1.1 (H:) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
superfamily: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
family: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
domain: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.60  E-value=0.058  Score=31.43  Aligned_cols=41  Identities=12%  Similarity=0.349  Sum_probs=32.6

Q ss_pred             hHHhHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHH
Q psy7349          30 SKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQN   75 (78)
Q Consensus        30 ~~eCt~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~k   75 (78)
                      .+.|.++++.|+.|-.+==+    +++..+ .|.++|=.|..||..
T Consensus        15 ~~~C~~~~~~~~eC~eRV~~----~~~~~E-~C~eE~fd~~hc~D~   55 (66)
T d1ppjh_          15 LEKCVKARERLELCDERVSS----RSQTEE-DCTEELLDFLHARDH   55 (66)
T ss_dssp             SHHHHHHHHHHHHHHHHHHT----CSSCSC-CSHHHHHHHHHHHHH
T ss_pred             cHhhHHHHHHHHHHHHHHhc----CCCCCC-CcHHHHHHHHHHHHH
Confidence            36789999999999887532    444444 599999999999875

>d1u97a_ a.17.1.2 (A:) Cytochrome C oxidase copper chaperone, COX17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: Cysteine alpha-hairpin motif
superfamily: Cysteine alpha-hairpin motif
family: COX17-like
domain: Cytochrome C oxidase copper chaperone, COX17
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.28  E-value=0.13  Score=30.52  Aligned_cols=37  Identities=24%  Similarity=0.720  Sum_probs=30.7

Q ss_pred             HHhHHHHHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHHHHH
Q psy7349          31 KECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQN   75 (78)
Q Consensus        31 ~eCt~lK~~YD~CFn~WfsEkFLkG~~~~~~C~~lf~~Yq~Cv~k   75 (78)
                      =.|.+-|++=|.|+-  |     .|..+. .|.++-++|++|+..
T Consensus        24 CaCpetK~aRDeCil--~-----~ge~~~-~C~~lIeahk~CMr~   60 (69)
T d1u97a_          24 CVCKPEKEERDTCIL--F-----NGQDSE-KCKEFIEKYKECMKG   60 (69)
T ss_dssp             SCCHHHHHHHHHHHH--H-----TCTTST-TSHHHHHHHHHHHHH
T ss_pred             ccCchhhhHhhHHHH--h-----cCCcHH-HHHHHHHHHHHHHHH
Confidence            359999999999997  2     377655 499999999999874

>d3cx5f1 f.28.1.1 (F:74-147) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Membrane and cell surface proteins and peptides
fold: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
superfamily: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
family: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
domain: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.37  E-value=0.36  Score=28.48  Aligned_cols=45  Identities=18%  Similarity=0.330  Sum_probs=32.7

Q ss_pred             hHHhHHHHHHHHHHHHHHHhhc----ccCCCCCCCCCHHHHHHHHHHHHH
Q psy7349          30 SKECTQLKHQYDECFQTWFTEK----FLKGDTDDSMCSPLLKVYQSCVQN   75 (78)
Q Consensus        30 ~~eCt~lK~~YD~CFn~WfsEk----FLkG~~~~~~C~~lf~~Yq~Cv~k   75 (78)
                      .+.|.++++.||.|-.+==+..    |--++. ...|.++|=.|..||..
T Consensus        15 ~~~C~~~~~~y~eC~eRV~s~~e~~~~~~~~~-~E~C~eE~fdl~hcvD~   63 (74)
T d3cx5f1          15 TEEGKALVHHYEECAERVKIQQQQPGYADLEH-KEDCVEEFFHLQHYLDT   63 (74)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHSTTGGGCCS-CCCCHHHHHHHHHHHHH
T ss_pred             cHhhHHHHHHHHHHHHHHHhcccCCCcCCCcc-ccchHHHHHHHHHHHHH
Confidence            3678899999999998865422    111223 34699999999999875