Psyllid ID: psy7362

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------
Protein Sequence
MLKRLSIKREEHNIIQKRKQSNSTISDEDDEENEVDEWKSKPEEEEDVEVDVEECSDYSNDAPVSRKRKSRSDYNSDDEKSESGDRDSPVSKNKIRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTGSMVK
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccHHHHHHHHHccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccHccccHHHHHHHHEEccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccEEEEEccHHHHHHHHHHccEEEccccccEcc
Coil and Loop (DISEMBL)
mlkrlsikREEHNIIQKrkqsnstisdeddeenevdewkskpeeeedvevdveecsdysndapvsrkrksrsdynsddeksesgdrdspvsknkirtrcnCAELLVTECHLETKELWDKFHDLGTEMIITKTGSMVK
Flexible Loop (DISEMBL)
mlkrlsikreehniiqkrkqsnstisdeddeenevdewkskpeeeedvevdveecsdysndapvsrkrksrsdynsddeksesgdrdspvsknkirtrcnCAELLVTECHLETKELWDKFHDLGTEMIitktgsmvk
Low Complexity Region (SEG)
MLKRLSIKREEHNIIQKRKQSNSTISdeddeenevdewkskpeeeedvevdveecsdYSNDAPVSRKRKSRSDYNSDDEKSESGDRDSPVSKNKIRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTGSMVK
Disordered region (IsUnstruct)
**********************************************************************************************IRTRCNCAELLVTECHLETKELWDKFHDLGTEMIIT*******
Disordered Region (DISOPRED)
************************************************************************************************************CHLETKELWDKFHDLGTEMIITKTGSM**
Disordered Region (DISEMBL)
MLKRLSIKREEHNII****************************************************************************KNKIRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTGSMVK
Disordered Region (DISPRO)
*LKRLSIKREEHNIIQKRK******************************************************************************RCNCAELLVTECHLETKELWDKFHDLGTEMIITKTGSMV*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLKRLSIKREEHNIIQKRKQSNSTISDEDDEENEVDEWKSKPEEEEDVEVDVEECSDYSNDAPVSRKRKSRSDYNSDDEKSESGDRDSPVSKNKIRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTGSMVK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	137	2.2.26 [Sep-21-2011]
Q94890	660	T-box protein H15 OS=Dros	no	N/A	0.291	0.060	0.725	6e-11
Q8AXW8	441	T-box transcription facto	N/A	N/A	0.226	0.070	0.774	1e-07
Q3SA46	440	T-box transcription facto	yes	N/A	0.226	0.070	0.774	1e-07
Q8UW76	440	T-box transcription facto	yes	N/A	0.226	0.070	0.741	3e-07
Q9ES03	445	T-box transcription facto	no	N/A	0.226	0.069	0.741	4e-07
Q9UMR3	447	T-box transcription facto	no	N/A	0.226	0.069	0.741	4e-07
Q9I9K7	446	T-box transcription facto	yes	N/A	0.226	0.069	0.741	5e-07
P90971	346	T-box protein 12 OS=Caeno	yes	N/A	0.211	0.083	0.724	7e-06
O15119	743	T-box transcription facto	no	N/A	0.175	0.032	0.75	4e-05
Q7TST9	743	T-box transcription facto	no	N/A	0.175	0.032	0.75	6e-05

>sp|Q94890|H15_DROME T-box protein H15 OS=Drosophila melanogaster GN=H15 PE=2 SV=2

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/40 (72%), Positives = 33/40 (82%)

Query: 94  KIRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTG 133
           KI   CNC +L   +CHLETKELWDKFH+LGTEMIITK+G
Sbjct: 264 KIVGSCNCDDLTPVQCHLETKELWDKFHELGTEMIITKSG 303

Drosophila melanogaster (taxid: 7227)

>sp|Q8AXW8|TBX20_XENLA T-box transcription factor TBX20 OS=Xenopus laevis GN=tbx20 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/31 (77%), Positives = 26/31 (83%)

Query: 103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
           E+    C LETKELWDKFHDLGTEMIITK+G
Sbjct: 90  EMAKISCSLETKELWDKFHDLGTEMIITKSG 120

Probable transcriptional regulator involved in developmental processes.

Xenopus laevis (taxid: 8355)

>sp|Q3SA46|TBX20_XENTR T-box transcription factor TBX20 OS=Xenopus tropicalis GN=tbx20 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/31 (77%), Positives = 26/31 (83%)

Query: 103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
           E+    C LETKELWDKFHDLGTEMIITK+G
Sbjct: 90  EMAKISCSLETKELWDKFHDLGTEMIITKSG 120

Probable transcriptional regulator involved in developmental processes.

Xenopus tropicalis (taxid: 8364)

>sp|Q8UW76|TBX20_CHICK T-box transcription factor TBX20 OS=Gallus gallus GN=TBX20 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
           E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct: 90  EMAKISCSLETKELWDKFHELGTEMIITKSG 120

Probable transcriptional regulator involved in developmental processes.

Gallus gallus (taxid: 9031)

>sp|Q9ES03|TBX20_MOUSE T-box transcription factor TBX20 OS=Mus musculus GN=Tbx20 PE=2 SV=3

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
           E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct: 95  EMAKIACSLETKELWDKFHELGTEMIITKSG 125

Probable transcriptional regulator involved in developmental processes.

Mus musculus (taxid: 10090)

>sp|Q9UMR3|TBX20_HUMAN T-box transcription factor TBX20 OS=Homo sapiens GN=TBX20 PE=1 SV=4

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
           E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct: 96  EMAKIACSLETKELWDKFHELGTEMIITKSG 126

Probable transcriptional regulator involved in developmental processes.

Homo sapiens (taxid: 9606)

>sp|Q9I9K7|TBX20_DANRE T-box transcription factor TBX20 OS=Danio rerio GN=tbx20 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
           E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct: 95  EMAKISCSLETKELWDKFHELGTEMIITKSG 125

May play a very early role in the differentiation of the cardiac precursors.

Danio rerio (taxid: 7955)

>sp|P90971|TBX12_CAEEL T-box protein 12 OS=Caenorhabditis elegans GN=mab-9 PE=2 SV=2

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/29 (72%), Positives = 22/29 (75%)

Query: 105 LVTECHLETKELWDKFHDLGTEMIITKTG 133
           L  EC LE  ELW KF DLGTEMIITK+G
Sbjct: 75  LPIECKLEGSELWAKFFDLGTEMIITKSG 103

Involved in cell fate determination; required to pattern the posterior hindgut.

Caenorhabditis elegans (taxid: 6239)

>sp|O15119|TBX3_HUMAN T-box transcription factor TBX3 OS=Homo sapiens GN=TBX3 PE=1 SV=4

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/24 (75%), Positives = 21/24 (87%)

Query: 110 HLETKELWDKFHDLGTEMIITKTG 133
           HLE KELWD+FH  GTEM+ITK+G
Sbjct: 106 HLEAKELWDQFHKRGTEMVITKSG 129

Transcriptional repressor involved in developmental processes. Probably plays a role in limb pattern formation.

Homo sapiens (taxid: 9606)

>sp|Q7TST9|TBX3_RAT T-box transcription factor TBX3 OS=Rattus norvegicus GN=Tbx3 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/24 (75%), Positives = 21/24 (87%)

Query: 110 HLETKELWDKFHDLGTEMIITKTG 133
           HLE KELWD+FH  GTEM+ITK+G
Sbjct: 106 HLEAKELWDQFHKRGTEMVITKSG 129

Transcriptional repressor involved in developmental processes. Probably plays a role in limb pattern formation.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
357611651	153	hypothetical protein KGM_02027 [Danaus p	0.620	0.555	0.568	2e-19
91082919	594	PREDICTED: similar to GA19742-PA [Tribol	0.656	0.151	0.575	8e-19
270007062	262	hypothetical protein TcasGA2_TC013511 [T	0.642	0.335	0.554	3e-18
312372936	355	hypothetical protein AND_19452 [Anophele	0.715	0.276	0.413	3e-15
242007806	151	t-box transcription factor tbx20, putati	0.576	0.523	0.505	5e-15
170028435	239	conserved hypothetical protein [Culex qu	0.664	0.380	0.464	6e-13
158293310	548	AGAP008567-PA [Anopheles gambiae str. PE	0.635	0.158	0.478	2e-12
157118524	459	t-box transcription factor tbx20 [Aedes	0.656	0.196	0.516	4e-12
322801383	206	hypothetical protein SINV_01829 [Solenop	0.518	0.344	0.535	2e-11
198476787	604	GA19742 [Drosophila pseudoobscura pseudo	0.569	0.129	0.493	3e-11

>gi|357611651|gb|EHJ67588.1| hypothetical protein KGM_02027 [Danaus plexippus]

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/95 (56%), Positives = 60/95 (63%), Gaps = 10/95 (10%)

Query: 42  PEEEEDVEVDVEECSDYSNDAPVSRKRKSRSDYNSDDEKSESGDRDSPVSKNKIRTR--- 98
           P  EEDVEVDVE+CSD   DA       S +   S    SE G+RD+P     + T    
Sbjct: 65  PAPEEDVEVDVEQCSDGERDA-------SDTAAPSPAPSSELGERDTPSPARPLPTPVTS 117

Query: 99  CNCAELLVTECHLETKELWDKFHDLGTEMIITKTG 133
           CNC ELL  +C LETKELWDKFHDLGTEMIITKTG
Sbjct: 118 CNCEELLSVDCQLETKELWDKFHDLGTEMIITKTG 152

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91082919|ref|XP_972670.1| PREDICTED: similar to GA19742-PA [Tribolium castaneum]

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 9/99 (9%)

Query: 42  PEEEEDVEVDVEECSDYSN---DAPVSRKRKSRSDYNSD--DEKSESGD--RDSPVSKNK 94
           P E++D+EVDVEECSD  +     P  R+  + SD  S+  D   ES D  ++ P+SK K
Sbjct: 142 PLEDDDIEVDVEECSDSESARASKPKLRQSPAISDCGSEPADLDRESPDIIQEKPISKAK 201

Query: 95  IRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTG 133
           I   CNC ELL  ECHLETK+LWDKFHDLGTEMIITKTG
Sbjct: 202 IS--CNCDELLNVECHLETKDLWDKFHDLGTEMIITKTG 238

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270007062|gb|EFA03510.1| hypothetical protein TcasGA2_TC013511 [Tribolium castaneum]

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/101 (55%), Positives = 65/101 (64%), Gaps = 13/101 (12%)

Query: 42  PEEEEDVEVDVEECSDYSNDAPVSRKRKSRSDYNSDDEKSESGDRD---------SPVSK 92
           P E++D+EVDVEECSD  +++  + K K R      D  SE  D D          P+SK
Sbjct: 142 PLEDDDIEVDVEECSD--SESARASKPKLRQSPAISDCGSEPADLDRESPDIIQEKPISK 199

Query: 93  NKIRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTG 133
            KI   CNC ELL  ECHLETK+LWDKFHDLGTEMIITKTG
Sbjct: 200 AKIS--CNCDELLNVECHLETKDLWDKFHDLGTEMIITKTG 238

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312372936|gb|EFR20785.1| hypothetical protein AND_19452 [Anopheles darlingi]

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 23/121 (19%)

Query: 39  KSKPEEEEDVEVDVEECSD--------------------YSNDAPVSRKRKSRSDYNSDD 78
           +S PE +++V+VDVE+CSD                      N +    + K+ S  ++ +
Sbjct: 33  RSIPEPDDEVDVDVEQCSDSETLLATTNTNTTTPGTTGRAVNRSTSKARSKAASPGSATN 92

Query: 79  EKSESGDRDSP---VSKNKIRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTGSM 135
             +   +R +P    SK++I   CNC EL   +CHLETKELWDKFHDLGTEMIITKTGS+
Sbjct: 93  ASASDEERLTPEPAQSKSRIVGSCNCEELRPVQCHLETKELWDKFHDLGTEMIITKTGSI 152

Query: 136 V 136
           +
Sbjct: 153 I 153

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242007806|ref|XP_002424712.1| t-box transcription factor tbx20, putative [Pediculus humanus corporis] gi|212508205|gb|EEB11974.1| t-box transcription factor tbx20, putative [Pediculus humanus corporis]

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 18/97 (18%)

Query: 55  CSDYSNDAPVSRKR--------KSRSDYNSDDEKSESGD---RDSPVSKN-------KIR 96
           CSD  N A V +K         +S    N  D  SE G+   RD+P S +       K++
Sbjct: 54  CSDSENVAVVVKKNNRVNKTSDRSSPVRNGSDTSSEQGEERGRDTPDSGDEKAGAGAKVK 113

Query: 97  TRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTG 133
            RCNC ELL+ +CHLETK+LWDKFHDLGTEMIITKTG
Sbjct: 114 IRCNCQELLMVDCHLETKDLWDKFHDLGTEMIITKTG 150

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170028435|ref|XP_001842101.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167874256|gb|EDS37639.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 8/99 (8%)

Query: 42  PEEEEDVEVDVEECSDYSNDAPVSRKRKSRSDYNSDDEKSESGDRD-------SPVSKNK 94
           PE +++ +VDVE+CSD S   P SR   S    +     +     D          +KN 
Sbjct: 23  PEVDDEGDVDVEQCSD-SETTPSSRHGSSSRKSHHSSRATPGTPSDEERLTPEPATTKNT 81

Query: 95  IRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTG 133
           I+  CN  +L   +CHLETKELWDKFHDLGTEMIITKTG
Sbjct: 82  IKGSCNSDDLRPVQCHLETKELWDKFHDLGTEMIITKTG 120

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293310|ref|XP_314674.4| AGAP008567-PA [Anopheles gambiae str. PEST] gi|157016644|gb|EAA10068.4| AGAP008567-PA [Anopheles gambiae str. PEST]

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 5/92 (5%)

Query: 45  EEDVEVDVEECSDYSNDAPVSRKRKSRSDYNSDDEKSESGDRDSP---VSKNKIRTRCNC 101
           EE++ V+VE+CSD        R+  SR+         E  DR SP       KI   CN 
Sbjct: 74  EEEINVNVEDCSDSEESTEQPRETHSRTASTPASVSDE--DRLSPEIAQKAPKIVGSCNS 131

Query: 102 AELLVTECHLETKELWDKFHDLGTEMIITKTG 133
            +L   +CHLETKELWDKF++LGTEMIITKTG
Sbjct: 132 DDLRPVQCHLETKELWDKFNELGTEMIITKTG 163

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118524|ref|XP_001659147.1| t-box transcription factor tbx20 [Aedes aegypti] gi|108875672|gb|EAT39897.1| AAEL008337-PA [Aedes aegypti]

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 48/93 (51%), Positives = 60/93 (64%), Gaps = 3/93 (3%)

Query: 42  PEEEEDVEVDVEECSDYSNDAPVS-RKRKSRSDYNSDDEKSESGDRDSPVSKNKIRTRCN 100
           PE ++DV+VDVE+CSD    +  S R  +SR+     DE  E    +   +K+ I   CN
Sbjct: 22  PEGDDDVDVDVEQCSDSETPSRASHRASQSRATGTPSDE--ERLTPEPATTKHNIVGTCN 79

Query: 101 CAELLVTECHLETKELWDKFHDLGTEMIITKTG 133
             +L   +CHLETKELWDKFHDLGTEMIITKTG
Sbjct: 80  SDDLRPVQCHLETKELWDKFHDLGTEMIITKTG 112

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322801383|gb|EFZ22044.1| hypothetical protein SINV_01829 [Solenopsis invicta]

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 45/71 (63%)

Query: 63  PVSRKRKSRSDYNSDDEKSESGDRDSPVSKNKIRTRCNCAELLVTECHLETKELWDKFHD 122
           PVS       +  +DD  S SG   SPV    ++ R NC EL    CHLETK+LWDKF++
Sbjct: 28  PVSETISPEDEPETDDTGSTSGKGASPVVNPLLQERSNCEELKHVVCHLETKDLWDKFNE 87

Query: 123 LGTEMIITKTG 133
           LGTEMIITKTG
Sbjct: 88  LGTEMIITKTG 98

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198476787|ref|XP_001357470.2| GA19742 [Drosophila pseudoobscura pseudoobscura] gi|198137853|gb|EAL34540.2| GA19742 [Drosophila pseudoobscura pseudoobscura]

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 56  SDYSNDAPVSRKRKSRSDYNSDDEKSESGDRDSPVSKN-KIRTRCNCAELLVTECHLETK 114
           S  +  +  S+ R S    +   E SE      PV K  KI   CNC +L   +CHLETK
Sbjct: 157 SQLNTSSTSSQGRCSTPPQSPGTEDSEERLTPEPVQKTPKIVGSCNCDDLKPVQCHLETK 216

Query: 115 ELWDKFHDLGTEMIITKTG 133
           ELWD+FH+LGTEMIITKTG
Sbjct: 217 ELWDRFHELGTEMIITKTG 235

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
FB|FBgn0261963	580	mid "midline" [Drosophila mela	0.503	0.118	0.557	6.3e-13
FB|FBgn0016660	660	H15 "H15" [Drosophila melanoga	0.423	0.087	0.55	1.2e-11
UNIPROTKB|Q8AXW8	441	tbx20 "T-box transcription fac	0.226	0.070	0.774	7.6e-08
UNIPROTKB|Q8UW76	440	TBX20 "T-box transcription fac	0.226	0.070	0.741	2.1e-07
ZFIN|ZDB-GENE-000427-7	447	tbx20 "T-box 20" [Danio rerio	0.226	0.069	0.741	2.1e-07
MGI|MGI:1888496	445	Tbx20 "T-box 20" [Mus musculus	0.226	0.069	0.741	2.7e-07
UNIPROTKB|Q9UMR3	447	TBX20 "T-box transcription fac	0.226	0.069	0.741	2.7e-07
UNIPROTKB|J9JHY2	448	TBX20 "Uncharacterized protein	0.226	0.069	0.741	2.7e-07
UNIPROTKB|E1BGZ6	449	TBX20 "Uncharacterized protein	0.226	0.069	0.741	2.7e-07
UNIPROTKB|F1SIK8	449	TBX20 "Uncharacterized protein	0.226	0.069	0.741	2.7e-07

FB|FBgn0261963 mid "midline" [Drosophila melanogaster (taxid:7227)]

 Score = 180 (68.4 bits), Expect = 6.3e-13, P = 6.3e-13
 Identities = 39/70 (55%), Positives = 44/70 (62%)

Query:    65 SRKRKSRSDYNSDDEKSESGDRDSPVSKN-KIRTRCNCAELLVTECHLETKELWDKFHDL 123
             S+ R S    +   E SE      PV K  KI   CNC +L   +CHLETKELWD+FHDL
Sbjct:   143 SQGRCSTPPQSPGTEDSEERLTPEPVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDL 202

Query:   124 GTEMIITKTG 133
             GTEMIITKTG
Sbjct:   203 GTEMIITKTG 212

GO:0007367 "segment polarity determination" evidence=IMP

GO:0007409 "axonogenesis" evidence=NAS;IMP

GO:0005634 "nucleus" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0007399 "nervous system development" evidence=IMP

GO:0007507 "heart development" evidence=IMP

GO:0035050 "embryonic heart tube development" evidence=IMP

GO:0042684 "cardioblast cell fate commitment" evidence=IMP

GO:0051890 "regulation of cardioblast differentiation" evidence=IMP

GO:0014019 "neuroblast development" evidence=IMP

GO:0014018 "neuroblast fate specification" evidence=IMP

GO:0003015 "heart process" evidence=IDA

GO:0048665 "neuron fate specification" evidence=IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0007402 "ganglion mother cell fate determination" evidence=IMP

GO:0051960 "regulation of nervous system development" evidence=IMP

GO:0007417 "central nervous system development" evidence=IGI;IMP

GO:0010629 "negative regulation of gene expression" evidence=IGI;IMP

GO:0007411 "axon guidance" evidence=IMP

GO:0042659 "regulation of cell fate specification" evidence=IGI

GO:0035223 "leg disc pattern formation" evidence=IGI

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA

GO:0001226 "RNA polymerase II transcription corepressor binding" evidence=IPI

GO:0001227 "RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IDA;IMP

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

FB|FBgn0016660 H15 "H15" [Drosophila melanogaster (taxid:7227)]

 Score = 169 (64.5 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/60 (55%), Positives = 40/60 (66%)

Query:    76 SDDEKSESGDRDSPVSKN--KIRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTG 133
             S +E       +SP  +   KI   CNC +L   +CHLETKELWDKFH+LGTEMIITK+G
Sbjct:   244 SPEELERLSPEESPAQQPTPKIVGSCNCDDLTPVQCHLETKELWDKFHELGTEMIITKSG 303

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS;NAS

GO:0007507 "heart development" evidence=IMP

GO:0042684 "cardioblast cell fate commitment" evidence=IMP

GO:0035050 "embryonic heart tube development" evidence=IMP

GO:0003015 "heart process" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0042659 "regulation of cell fate specification" evidence=IGI

GO:0035223 "leg disc pattern formation" evidence=IGI

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|Q8AXW8 tbx20 "T-box transcription factor TBX20" [Xenopus laevis (taxid:8355)]

 Score = 131 (51.2 bits), Expect = 7.6e-08, P = 7.6e-08
 Identities = 24/31 (77%), Positives = 26/31 (83%)

Query:   103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
             E+    C LETKELWDKFHDLGTEMIITK+G
Sbjct:    90 EMAKISCSLETKELWDKFHDLGTEMIITKSG 120

GO:0000578 "embryonic axis specification" evidence=IMP

GO:0001706 "endoderm formation" evidence=IMP

GO:0048370 "lateral mesoderm formation" evidence=IMP

UNIPROTKB|Q8UW76 TBX20 "T-box transcription factor TBX20" [Gallus gallus (taxid:9031)]

 Score = 127 (49.8 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query:   103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
             E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct:    90 EMAKISCSLETKELWDKFHELGTEMIITKSG 120

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA

GO:0001102 "RNA polymerase II activating transcription factor binding" evidence=IEA

GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA

GO:0001569 "patterning of blood vessels" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0001947 "heart looping" evidence=IEA

GO:0003148 "outflow tract septum morphogenesis" evidence=IEA

GO:0003175 "tricuspid valve development" evidence=IEA

GO:0003180 "aortic valve morphogenesis" evidence=IEA

GO:0003193 "pulmonary valve formation" evidence=IEA

GO:0003207 "cardiac chamber formation" evidence=IEA

GO:0003215 "cardiac right ventricle morphogenesis" evidence=IEA

GO:0003272 "endocardial cushion formation" evidence=IEA

GO:0003344 "pericardium morphogenesis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006936 "muscle contraction" evidence=IEA

GO:0008015 "blood circulation" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0009953 "dorsal/ventral pattern formation" evidence=IEA

GO:0010991 "negative regulation of SMAD protein complex assembly" evidence=IEA

GO:0021524 "visceral motor neuron differentiation" evidence=IEA

GO:0035922 "foramen ovale closure" evidence=IEA

GO:0036306 "embryonic heart tube elongation" evidence=IEA

GO:0055008 "cardiac muscle tissue morphogenesis" evidence=IEA

GO:0060045 "positive regulation of cardiac muscle cell proliferation" evidence=IEA

GO:0060413 "atrial septum morphogenesis" evidence=IEA

GO:0060577 "pulmonary vein morphogenesis" evidence=IEA

ZFIN|ZDB-GENE-000427-7 tbx20 "T-box 20" [Danio rerio (taxid:7955)]

 Score = 127 (49.8 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query:   103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
             E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct:    95 EMAKISCSLETKELWDKFHELGTEMIITKSG 125

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007507 "heart development" evidence=IEP

GO:0035050 "embryonic heart tube development" evidence=IMP

GO:0001570 "vasculogenesis" evidence=IMP

GO:0001568 "blood vessel development" evidence=IMP

GO:0035162 "embryonic hemopoiesis" evidence=IMP

GO:0001947 "heart looping" evidence=IMP

GO:0035844 "cloaca development" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP

GO:0003677 "DNA binding" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

MGI|MGI:1888496 Tbx20 "T-box 20" [Mus musculus (taxid:10090)]

 Score = 126 (49.4 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query:   103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
             E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct:    95 EMAKIACSLETKELWDKFHELGTEMIITKSG 125

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IGI;IMP

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=ISO;IDA

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IPI

GO:0001102 "RNA polymerase II activating transcription factor binding" evidence=IPI

GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=ISO;IDA

GO:0001569 "patterning of blood vessels" evidence=IMP

GO:0001764 "neuron migration" evidence=IMP

GO:0001947 "heart looping" evidence=IMP

GO:0003143 "embryonic heart tube morphogenesis" evidence=IMP

GO:0003148 "outflow tract septum morphogenesis" evidence=ISO;IMP

GO:0003151 "outflow tract morphogenesis" evidence=IMP

GO:0003175 "tricuspid valve development" evidence=IMP

GO:0003176 "aortic valve development" evidence=IMP

GO:0003180 "aortic valve morphogenesis" evidence=ISO

GO:0003193 "pulmonary valve formation" evidence=IMP

GO:0003203 "endocardial cushion morphogenesis" evidence=IMP

GO:0003207 "cardiac chamber formation" evidence=IMP

GO:0003215 "cardiac right ventricle morphogenesis" evidence=IMP

GO:0003272 "endocardial cushion formation" evidence=IMP

GO:0003279 "cardiac septum development" evidence=IMP

GO:0003344 "pericardium morphogenesis" evidence=IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0006936 "muscle contraction" evidence=IMP

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008015 "blood circulation" evidence=IMP

GO:0008283 "cell proliferation" evidence=IMP

GO:0009953 "dorsal/ventral pattern formation" evidence=IMP

GO:0010717 "regulation of epithelial to mesenchymal transition" evidence=NAS

GO:0010991 "negative regulation of SMAD protein complex assembly" evidence=IDA

GO:0021524 "visceral motor neuron differentiation" evidence=IMP

GO:0035050 "embryonic heart tube development" evidence=IGI;IMP

GO:0035922 "foramen ovale closure" evidence=ISO

GO:0036306 "embryonic heart tube elongation" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP;IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0055008 "cardiac muscle tissue morphogenesis" evidence=IMP

GO:0060045 "positive regulation of cardiac muscle cell proliferation" evidence=IMP

GO:0060413 "atrial septum morphogenesis" evidence=ISO

GO:0060577 "pulmonary vein morphogenesis" evidence=ISO

UNIPROTKB|Q9UMR3 TBX20 "T-box transcription factor TBX20" [Homo sapiens (taxid:9606)]

 Score = 126 (49.4 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query:   103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
             E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct:    96 EMAKIACSLETKELWDKFHELGTEMIITKSG 126

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0001569 "patterning of blood vessels" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0006936 "muscle contraction" evidence=IEA

GO:0008015 "blood circulation" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0010991 "negative regulation of SMAD protein complex assembly" evidence=IEA

GO:0036306 "embryonic heart tube elongation" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0003143 "embryonic heart tube morphogenesis" evidence=ISS

GO:0003203 "endocardial cushion morphogenesis" evidence=ISS

GO:0003207 "cardiac chamber formation" evidence=ISS

GO:0003344 "pericardium morphogenesis" evidence=ISS

GO:0060045 "positive regulation of cardiac muscle cell proliferation" evidence=ISS

GO:0009953 "dorsal/ventral pattern formation" evidence=ISS

GO:0055008 "cardiac muscle tissue morphogenesis" evidence=ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISS

GO:0021524 "visceral motor neuron differentiation" evidence=ISS

GO:0003279 "cardiac septum development" evidence=ISS

GO:0003272 "endocardial cushion formation" evidence=ISS

GO:0003215 "cardiac right ventricle morphogenesis" evidence=ISS

GO:0003193 "pulmonary valve formation" evidence=ISS

GO:0003175 "tricuspid valve development" evidence=ISS

GO:0001947 "heart looping" evidence=ISS

GO:0035922 "foramen ovale closure" evidence=IMP

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0001102 "RNA polymerase II activating transcription factor binding" evidence=ISS

GO:0001085 "RNA polymerase II transcription factor binding" evidence=ISS

GO:0048370 "lateral mesoderm formation" evidence=ISS

GO:0001706 "endoderm formation" evidence=ISS

GO:0060413 "atrial septum morphogenesis" evidence=IMP

GO:0003148 "outflow tract septum morphogenesis" evidence=IMP

GO:0003180 "aortic valve morphogenesis" evidence=IMP

GO:0060577 "pulmonary vein morphogenesis" evidence=IMP

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA

GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

UNIPROTKB|J9JHY2 TBX20 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 126 (49.4 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query:   103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
             E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct:    97 EMAKIACSLETKELWDKFHELGTEMIITKSG 127

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

UNIPROTKB|E1BGZ6 TBX20 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 126 (49.4 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query:   103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
             E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct:    98 EMAKIACSLETKELWDKFHELGTEMIITKSG 128

GO:0060577 "pulmonary vein morphogenesis" evidence=IEA

GO:0060413 "atrial septum morphogenesis" evidence=IEA

GO:0060045 "positive regulation of cardiac muscle cell proliferation" evidence=IEA

GO:0055008 "cardiac muscle tissue morphogenesis" evidence=IEA

GO:0036306 "embryonic heart tube elongation" evidence=IEA

GO:0035922 "foramen ovale closure" evidence=IEA

GO:0021524 "visceral motor neuron differentiation" evidence=IEA

GO:0010991 "negative regulation of SMAD protein complex assembly" evidence=IEA

GO:0009953 "dorsal/ventral pattern formation" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0008015 "blood circulation" evidence=IEA

GO:0006936 "muscle contraction" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003344 "pericardium morphogenesis" evidence=IEA

GO:0003272 "endocardial cushion formation" evidence=IEA

GO:0003215 "cardiac right ventricle morphogenesis" evidence=IEA

GO:0003207 "cardiac chamber formation" evidence=IEA

GO:0003193 "pulmonary valve formation" evidence=IEA

GO:0003180 "aortic valve morphogenesis" evidence=IEA

GO:0003175 "tricuspid valve development" evidence=IEA

GO:0003148 "outflow tract septum morphogenesis" evidence=IEA

GO:0001947 "heart looping" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0001569 "patterning of blood vessels" evidence=IEA

GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA

GO:0001102 "RNA polymerase II activating transcription factor binding" evidence=IEA

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

UNIPROTKB|F1SIK8 TBX20 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 126 (49.4 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query:   103 ELLVTECHLETKELWDKFHDLGTEMIITKTG 133
             E+    C LETKELWDKFH+LGTEMIITK+G
Sbjct:    98 EMAKIACSLETKELWDKFHELGTEMIITKSG 128

GO:0060577 "pulmonary vein morphogenesis" evidence=IEA

GO:0060413 "atrial septum morphogenesis" evidence=IEA

GO:0060045 "positive regulation of cardiac muscle cell proliferation" evidence=IEA

GO:0055008 "cardiac muscle tissue morphogenesis" evidence=IEA

GO:0036306 "embryonic heart tube elongation" evidence=IEA

GO:0035922 "foramen ovale closure" evidence=IEA

GO:0021524 "visceral motor neuron differentiation" evidence=IEA

GO:0010991 "negative regulation of SMAD protein complex assembly" evidence=IEA

GO:0009953 "dorsal/ventral pattern formation" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0008015 "blood circulation" evidence=IEA

GO:0006936 "muscle contraction" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003344 "pericardium morphogenesis" evidence=IEA

GO:0003272 "endocardial cushion formation" evidence=IEA

GO:0003215 "cardiac right ventricle morphogenesis" evidence=IEA

GO:0003207 "cardiac chamber formation" evidence=IEA

GO:0003193 "pulmonary valve formation" evidence=IEA

GO:0003180 "aortic valve morphogenesis" evidence=IEA

GO:0003175 "tricuspid valve development" evidence=IEA

GO:0003148 "outflow tract septum morphogenesis" evidence=IEA

GO:0001947 "heart looping" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0001569 "patterning of blood vessels" evidence=IEA

GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IEA

GO:0001102 "RNA polymerase II activating transcription factor binding" evidence=IEA

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	137
cd00182	188	cd00182, TBOX, T-box DNA binding domain of the T-b	2e-11
pfam00907	182	pfam00907, T-box, T-box	4e-11
smart00425	190	smart00425, TBOX, Domain first found in the mice T	3e-09

>gnl|CDD|238106 cd00182, TBOX, T-box DNA binding domain of the T-box family of transcriptional regulators

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 18/26 (69%), Positives = 22/26 (84%)

Query: 108 ECHLETKELWDKFHDLGTEMIITKTG 133
           +  LE +ELW KFH+LGTEMIITK+G
Sbjct: 3   KVSLENRELWKKFHELGTEMIITKSG 28

The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA binding domain of murine Brachyury (T) gene product, the defining feature of the family. Common features shared by T-box family members are DNA-binding and transcriptional regulatory activity, a role in development and conserved expression patterns, most of the known genes in all species being expressed in mesoderm or mesoderm precursors. Length = 188

>gnl|CDD|216184 pfam00907, T-box, T-box

 Score = 57.3 bits (139), Expect = 4e-11
 Identities = 19/26 (73%), Positives = 22/26 (84%)

Query: 108 ECHLETKELWDKFHDLGTEMIITKTG 133
              LE +ELWDKFH+LGTEMIITK+G
Sbjct: 1   TVSLEDRELWDKFHELGTEMIITKSG 26

The T-box encodes a 180 amino acid domain that binds to DNA. Genes encoding T-box proteins are found in a wide range of animals, but not in other kingdoms such as plants. Family members are all thought to bind to the DNA consensus sequence TCACACCT. they are found exclusively in the nucleus, and perform DNA-binding and transcriptional activation/repression roles. They are generally required for development of the specific tissues they are expressed in, and mutations in T-box genes are implicated in human conditions such as DiGeorge syndrome and X-linked cleft palate, which feature malformations. Length = 182

>gnl|CDD|214656 smart00425, TBOX, Domain first found in the mice T locus (Brachyury) protein

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 18/26 (69%), Positives = 22/26 (84%)

Query: 108 ECHLETKELWDKFHDLGTEMIITKTG 133
           +  LE KELW KFH+LGTEMI+TK+G
Sbjct: 2   KVSLEDKELWRKFHELGTEMIVTKSG 27

Length = 190

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	137
KOG3586|consensus	437		99.53
KOG3585|consensus	328		98.72

>KOG3586|consensus

Probab=99.53  E-value=7.4e-15  Score=129.56  Aligned_cols=51  Identities=53%  Similarity=0.845  Sum_probs=42.0

Q ss_pred             CCCCCCcccc-cccccccccccccceeeccHhHHHHHHhccceeeeecCCCCC
Q psy7362          85 DRDSPVSKNK-IRTRCNCAELLVTECHLETKELWDKFHDLGTEMIITKTGSMV  136 (137)
Q Consensus        85 ~r~sP~~~~~-l~t~~~~~~l~~v~v~LE~~eLW~kF~qlGTEMIITKsGRRM  136 (137)
                      .|++|...++ .....+|. +..|+|.|+.++||++||+|||||||||+||||
T Consensus        58 ~~~~p~~~a~~~~~k~~~~-~a~i~~~Le~keLWdrFh~lGTEMIITKsGRRM  109 (437)
T KOG3586|consen   58 ERLSPEIAAAKPKVKKNCK-LAPIQVQLETKELWDRFHDLGTEMIITKSGRRM  109 (437)
T ss_pred             cccCccccccCCCcCCccc-ccceEEEeehHHHHHHHHhcCceEEEecccccc
Confidence            6777766432 33444554 889999999999999999999999999999999

>KOG3585|consensus

Probab=98.72  E-value=6.5e-09  Score=88.24  Aligned_cols=31  Identities=52%  Similarity=0.919  Sum_probs=30.1

Q ss_pred             ccceeeccHhHHHHHHhccceeeeecCCCCC
Q psy7362         106 VTECHLETKELWDKFHDLGTEMIITKTGSMV  136 (137)
Q Consensus       106 ~v~v~LE~~eLW~kF~qlGTEMIITKsGRRM  136 (137)
                      .++|+|++.+||.+||.+||||||||.||||
T Consensus        24 ~~~v~l~~~eLW~~fh~~~~EmiitK~GRrm   54 (328)
T KOG3585|consen   24 QVKVSLENRELWKKFHEHGTEMIVTKRGRRM   54 (328)
T ss_pred             ccEEEEechhHHHhhccCccEEEEecCCcee
Confidence            4999999999999999999999999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	137
1h6f_A	193	Human Tbx3, A Transcription Factor Responsible For		6e-06
4a04_A	203	Structure Of The Dna-Bound T-Box Domain Of Human Tb		2e-04
2x6u_A	203	Crystal Structure Of Human Tbx5 In The Dna-Free For		4e-04

>pdb|1H6F|A Chain A, Human Tbx3, A Transcription Factor Responsible For Ulnar- Mammary Syndrome, Bound To A Palindromic Dna Site Length = 193

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 108 ECHLETKELWDKFHDLGTEMIITKTG 133
           + HLE KELWD+FH  GTEM+ITK+G
Sbjct: 6   KVHLEAKELWDQFHKRGTEMVITKSG 31

>pdb|4A04|A Chain A, Structure Of The Dna-Bound T-Box Domain Of Human Tbx1, A Transcription Factor Associated With The Digeorge Syndrome Length = 203

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 109 CHLETKELWDKFHDLGTEMIITKTG 133
             LE K LWD+F+ LGTEMI+TK G
Sbjct: 18  VQLEMKALWDEFNQLGTEMIVTKAG 42

>pdb|2X6U|A Chain A, Crystal Structure Of Human Tbx5 In The Dna-Free Form Length = 203

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 19/23 (82%)
Query: 111 LETKELWDKFHDLGTEMIITKTG 133
           L  +ELW KFH++GTEMIITK G
Sbjct: 10  LHERELWLKFHEVGTEMIITKAG 32

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	137
1xbr_A	184	Protein (T protein); complex (transcription factor	7e-06
4a04_A	203	T-box transcription factor TBX1; transcription, T-	1e-05
1h6f_A	193	T-box transcription factor TBX3; transcription fac	6e-05
2x6u_A	203	T-box transcription factor TBX5; developmental pro	2e-04

>1xbr_A Protein (T protein); complex (transcription factor/DNA), transcription factor, DNA-binding protein, transcription/DNA complex; HET: DNA; 2.50A {Xenopus laevis} SCOP: b.2.5.4 Length = 184

 Score = 42.4 bits (99), Expect = 7e-06
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 108 ECHLETKELWDKFHDLGTEMIITKTGSMV 136
           +  LE ++LW +F +L  EMI+TK G  +
Sbjct: 3   KVSLEERDLWTRFKELTNEMIVTKNGRRM 31

>4a04_A T-box transcription factor TBX1; transcription, T-box proteins; HET: DNA; 2.58A {Homo sapiens} Length = 203

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 16/29 (55%), Positives = 20/29 (68%)

Query: 108 ECHLETKELWDKFHDLGTEMIITKTGSMV 136
              LE K LWD+F+ LGTEMI+TK G  +
Sbjct: 17  SVQLEMKALWDEFNQLGTEMIVTKAGRRM 45

>1h6f_A T-box transcription factor TBX3; transcription factor, TBX3, T-box transcription factor; 1.7A {Homo sapiens} SCOP: b.2.5.4 Length = 193

 Score = 39.8 bits (92), Expect = 6e-05
 Identities = 18/29 (62%), Positives = 23/29 (79%)

Query: 108 ECHLETKELWDKFHDLGTEMIITKTGSMV 136
           + HLE KELWD+FH  GTEM+ITK+G  +
Sbjct: 6   KVHLEAKELWDQFHKRGTEMVITKSGRRM 34

>2x6u_A T-box transcription factor TBX5; developmental protein, DNA-binding, HOLT-ORAM-syndrome, IG-fold, nuclear protein, repressor; HET: PE4; 1.90A {Homo sapiens} PDB: 2x6v_A* Length = 203

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 108 ECHLETKELWDKFHDLGTEMIITKTGSMV 136
           +  L  +ELW KFH++GTEMIITK G  +
Sbjct: 7   KVFLHERELWLKFHEVGTEMIITKAGRRM 35

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	137
4a04_A	203	T-box transcription factor TBX1; transcription, T-	99.25

>4a04_A T-box transcription factor TBX1; transcription, T-box proteins; HET: DNA; 2.58A {Homo sapiens}

Probab=99.25  E-value=1.6e-12  Score=102.66  Aligned_cols=32  Identities=50%  Similarity=0.810  Sum_probs=30.4

Q ss_pred             cccceeeccHhHHHHHHhccceeeeecCCCCC
Q psy7362         105 LVTECHLETKELWDKFHDLGTEMIITKTGSMV  136 (137)
Q Consensus       105 ~~v~v~LE~~eLW~kF~qlGTEMIITKsGRRM  136 (137)
                      .+++|+|++++||.+|+++||||||||+||||
T Consensus        14 ~~i~V~Le~~~LW~~Fh~~~tEMIITK~GRrm   45 (203)
T 4a04_A           14 GGVSVQLEMKALWDEFNQLGTEMIVTKAGRRM   45 (203)
T ss_dssp             -CCEEEETTHHHHHHHHHHCCEEECCSSCEEC
T ss_pred             CCcEEEeCCHHHHHhhCcCCCeEEEEeCCccc
Confidence            57899999999999999999999999999999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	137
d1xbra_	184	b.2.5.4 (A:) T domain from Brachyury transcription	1e-09
d1h6fa_	184	b.2.5.4 (A:) T-box protein 3, tbx3 {Human (Homo sa	1e-08

>d1xbra_ b.2.5.4 (A:) T domain from Brachyury transcription factor {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 184

class: All beta proteins
fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
superfamily: p53-like transcription factors
family: T-box
domain: T domain from Brachyury transcription factor
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 51.4 bits (123), Expect = 1e-09
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 108 ECHLETKELWDKFHDLGTEMIITKTG 133
           +  LE ++LW +F +L  EMI+TK G
Sbjct: 3   KVSLEERDLWTRFKELTNEMIVTKNG 28

>d1h6fa_ b.2.5.4 (A:) T-box protein 3, tbx3 {Human (Homo sapiens) [TaxId: 9606]} Length = 184

class: All beta proteins
fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
superfamily: p53-like transcription factors
family: T-box
domain: T-box protein 3, tbx3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (116), Expect = 1e-08
 Identities = 18/26 (69%), Positives = 22/26 (84%)

Query: 108 ECHLETKELWDKFHDLGTEMIITKTG 133
           + HLE KELWD+FH  GTEM+ITK+G
Sbjct: 3   KVHLEAKELWDQFHKRGTEMVITKSG 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00