Psyllid ID: psy7467

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
Protein Sequence
MERSLHGSCKRIFFKTSGGSAEVCGCWNVPRLIVDSLIRQYWAVNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH
Secondary Structure (PSIPRED)
ccccccccccHHHHHHcccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHHHHcccccccEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccEEEEEcccccccccEEEEcccccEEEEEEcccccccccccccccccccccccccccccccccccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEEEccccccEEcccccccHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHEEEEEEHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccEEEEEEcccccccccEEEEccccccEEEEEHHHHHcccccccccccccccccccccccccccccccccEEEEEEcc
Coil and Loop (DISEMBL)
merslhgsckriffktsggsaevcgcwnvprlIVDSLIRQYWAVNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRrvyhettivphqiahgmdaesfeksrrysldKNVFSMFKETVSNVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIypefiaplfdkytplpdgeLKSRIEQLSAsvkfplkklyvvegskrsehsnayfygffknKRIVLFDTLLkdyvplnadkkdksgdseplistegankkgcdtEEVLAVLAH
Flexible Loop (DISEMBL)
merslhgsckriffktsggsaevcgCWNVPRLIVDSLIRQYWAVNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETtivphqiahgmdaesfEKSRRYSLDKNVFSMFKETVSNVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQlsasvkfplKKLYVVegskrsehsnAYFYGFFKNKRIVLFDTLLKDYVPlnadkkdksgdseplistegankkgcdtEEVLAVLAH
Low Complexity Region (SEG)
MERSLHGSCKRIFFKTSGGSAEVCGCWNVPRLIVDSLIRQYWAVNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH
Disordered region (IsUnstruct)
********CKRIFFKTSGGSAEVCGCWNVPRLIVDSLIRQYWAVNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPL************************************
Disordered Region (DISOPRED)
********CKRIFFKTSGGSAEVCGCWNVPRLIVDSLIRQYWAVNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLN********************KKGCDTEEVLAVLAH
Disordered Region (DISEMBL)
********CKRIFFKTSGGSAEVCGCWNVPRLIVDSLIRQYWAVNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH
Disordered Region (DISPRO)
******GSCKRIFFKTSGGSAEVCGCWNVPRLIVDSLIRQYWAVNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYV**************************CDTEEVLAVLA*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MERSLHGSCKRIFFKTSGGSAEVCGCWNVPRLIVDSLIRQYWAVNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	295	2.2.26 [Sep-21-2011]
O75844	475	CAAX prenyl protease 1 ho	yes	N/A	0.576	0.357	0.536	5e-51
Q80W54	475	CAAX prenyl protease 1 ho	yes	N/A	0.576	0.357	0.541	1e-50
Q8RX88	424	CAAX prenyl protease 1 ho	yes	N/A	0.447	0.311	0.546	2e-40
Q6EPN8	425	CAAX prenyl protease 1 ho	yes	N/A	0.433	0.301	0.562	3e-34
Q10071	474	Probable CAAX prenyl prot	yes	N/A	0.501	0.312	0.428	4e-26
Q54FH7	426	CAAX prenyl protease 1 ho	yes	N/A	0.471	0.326	0.370	2e-23
P47154	453	CAAX prenyl protease 1 OS	yes	N/A	0.444	0.289	0.453	4e-23
P40769	426	Uncharacterized metallopr	yes	N/A	0.447	0.309	0.340	6e-14

>sp|O75844|FACE1_HUMAN CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2

 Score =  201 bits (511), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 96/179 (53%), Positives = 132/179 (73%), Gaps = 9/179 (5%)

Query: 126 NTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYP 185
             T GFF+KD IK F+V+  + +P++  ++YII++GG+  F+Y W+F +++SL L+TIY 
Sbjct: 157 QQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYA 216

Query: 186 EFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKR 245
           ++IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKR
Sbjct: 217 DYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKR 276

Query: 246 IVLFDTLLKDYVPLNAD---------KKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH 295
           IVLFDTLL++Y  LN D         + ++ G+SE + +     K+GC  EEVLAVL H
Sbjct: 277 IVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGCKNEEVLAVLGH 335

Proteolytically removes the C-terminal three residues of farnesylated proteins. Acts on lamin A/C.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 8EC: 4

>sp|Q80W54|FACE1_MOUSE CAAX prenyl protease 1 homolog OS=Mus musculus GN=Zmpste24 PE=1 SV=2

 Score =  200 bits (508), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 97/179 (54%), Positives = 132/179 (73%), Gaps = 9/179 (5%)

Query: 126 NTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYP 185
           + T  FF+KD IK FIV+  + +P++  ++YII++GG+  F+Y W+F +++SL L+TIY 
Sbjct: 157 HQTLEFFMKDAIKKFIVTQCILLPVSALLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYA 216

Query: 186 EFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKR 245
           ++IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKR
Sbjct: 217 DYIAPLFDKFTPLPEGKLKQEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKR 276

Query: 246 IVLFDTLLKDYVPLNADKKDKS---------GDSEPLISTEGANKKGCDTEEVLAVLAH 295
           IVLFDTLL++Y   N D +++S         GDSE + +     K+GC  EEVLAVL H
Sbjct: 277 IVLFDTLLEEYSVPNKDNQEESGMEARNEGEGDSEEVKAKVKNKKQGCKNEEVLAVLGH 335

Proteolytically removes the C-terminal three residues of farnesylated proteins. Acts on lamin A/C.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 8

EC: 4

>sp|Q8RX88|FACE1_ARATH CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1 PE=1 SV=1

 Score =  166 bits (419), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 76/139 (54%), Positives = 108/139 (77%), Gaps = 7/139 (5%)

Query: 124 VMNTTYGF-------FVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILM 176
           V+ + +GF       F++D IK   +S+IL  P+  A+++I+Q GG  + +YLW F+ ++
Sbjct: 133 VIESRHGFNKQTIWMFIRDMIKGTFLSVILGPPIVAAIIFIVQKGGPYLAIYLWAFMFIL 192

Query: 177 SLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAY 236
           SL +MTIYP  IAPLF+K+TPLPDG+L+ +IE+L++S+KFPLKKL+VV+GS RS HSNAY
Sbjct: 193 SLVMMTIYPVLIAPLFNKFTPLPDGDLREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAY 252

Query: 237 FYGFFKNKRIVLFDTLLKD 255
            YGFFKNKRIVL+DTL++ 
Sbjct: 253 MYGFFKNKRIVLYDTLIQQ 271

Proteolytically removes the C-terminal three residues of farnesylated proteins. The substrate specificity is only partially overlaping with that of FACE2.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 8

EC: 4

>sp|Q6EPN8|FACE1_ORYSJ CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1

 Score =  145 bits (367), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 100/128 (78%)

Query: 128 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 187
           T   F++D IK  ++S++L  P+  A++ I+Q GG  + +YLW F+  +SL +MTIYP  
Sbjct: 144 TIWLFIRDMIKGILLSILLGPPIVAAIIIIVQNGGPYLAIYLWGFMFALSLVMMTIYPIV 203

Query: 188 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV 247
           IAPLF+K+TPLP+G L+ +IE+L+AS+ FPLKKL+VV+GS RS HSNAY YGFFKNKRIV
Sbjct: 204 IAPLFNKFTPLPEGVLREKIEKLAASLSFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIV 263

Query: 248 LFDTLLKD 255
           L+DTL++ 
Sbjct: 264 LYDTLIQQ 271

Proteolytically removes the C-terminal three residues of farnesylated proteins.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 8

EC: 4

>sp|Q10071|STE24_SCHPO Probable CAAX prenyl protease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.05 PE=3 SV=1

 Score =  119 bits (297), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 96/161 (59%), Gaps = 13/161 (8%)

Query: 104 SRRYSLDKNVFSMFKETVSNVMNTTYGF-------FVKDQIKSFIVSLILSIPLTGAVVY 156
           SR   +  N++S F      V+   YGF       FV D +K   +  +L   + G  V 
Sbjct: 168 SRLIQIPFNLYSTF------VIEEKYGFNKSTLKIFVIDLLKELSLGGLLMSVVVGVFVK 221

Query: 157 IIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKF 216
           I+   G+   +Y W   I+  L L TI P  I PLF K+TPL +G L+++IE+L+AS+ F
Sbjct: 222 ILTKFGDNFIMYAWGAYIVFGLILQTIAPSLIMPLFYKFTPLENGSLRTQIEELAASINF 281

Query: 217 PLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYV 257
           PLKKLYV++ S+RS HSNA+FYG   NK IVLFDTL+K++ 
Sbjct: 282 PLKKLYVIDASRRSTHSNAFFYGLPWNKGIVLFDTLVKNHT 322

Proteolytically removes the C-terminal three residues of farnesylated proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 8

EC: 4

>sp|Q54FH7|FACE1_DICDI CAAX prenyl protease 1 homolog OS=Dictyostelium discoideum GN=zmpste24 PE=3 SV=1

 Score =  109 bits (273), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 92/170 (54%), Gaps = 31/170 (18%)

Query: 128 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 187
           T   F+KD+I S ++ +   +P+    ++II   G  ++ Y W+ ++ ++L  +TIYP F
Sbjct: 142 TRTLFIKDKIISTLLMIGFGLPILSLAIFIINWSGPQLWFYCWLLLVAITLLSITIYPTF 201

Query: 188 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKK--LYVVEGSKRSEHSNAYFYGFFKNKR 245
           I PLF+K+TP+ DGEL   I  L+  V FP  K  ++VV+ SKR  H NAYFYG F  KR
Sbjct: 202 IQPLFNKFTPV-DGELAESIFALAKRVGFPASKDTIFVVDNSKRDGHMNAYFYGLFGTKR 260

Query: 246 IVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH 295
           IVL+DTL+ +                             D EE+LAV+ H
Sbjct: 261 IVLYDTLVNE----------------------------LDKEELLAVMGH 282

Proteolytically removes the C-terminal three residues of farnesylated proteins.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 8

EC: 4

>sp|P47154|STE24_YEAST CAAX prenyl protease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE24 PE=1 SV=1

 Score =  108 bits (271), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 89/139 (64%), Gaps = 8/139 (5%)

Query: 124 VMNTTYGF---FVKDQIKSFIVSLILSIPLTGAVVYI-IQVGGNMVFLYLW---VFIILM 176
           V+   +GF    V+  I   I SL L+  + G ++Y+ +++       +LW   VF+ ++
Sbjct: 146 VLEEKFGFNKLTVQLWITDMIKSLTLAYAIGGPILYLFLKIFDKFPTDFLWYIMVFLFVV 205

Query: 177 SLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAY 236
            +  MTI P FI P+F+K+TPL DGELK  IE L+  V FPL K++V++GSKRS HSNAY
Sbjct: 206 QILAMTIIPVFIMPMFNKFTPLEDGELKKSIESLADRVGFPLDKIFVIDGSKRSSHSNAY 265

Query: 237 FYGF-FKNKRIVLFDTLLK 254
           F G  F +KRIVLFDTL+ 
Sbjct: 266 FTGLPFTSKRIVLFDTLVN 284

Proteolytically removes the C-terminal three residues of farnesylated A-factor mating pheromone. Also acts to cleave the N-terminal extension of the pheromone. Does not act on Ras.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 8

EC: 4

>sp|P40769|YHFN_BACSU Uncharacterized metalloprotease YhfN OS=Bacillus subtilis (strain 168) GN=yhfN PE=3 SV=2

 Score = 78.2 bits (191), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 69/132 (52%)

Query: 123 NVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMT 182
           N+   T   + KDQ+ SF +S  +         ++I+      +LY W+  +  SLFL  
Sbjct: 133 NISTQTTASWAKDQVISFWISFPIFTLCVLVFYWLIKRHEKKWWLYAWLLTVPFSLFLFF 192

Query: 183 IYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFK 242
           I P  I PL++ + PL + EL+S+I +L+     P   +Y V  S+++   NAY  G   
Sbjct: 193 IQPVIIDPLYNDFYPLKNKELESKILELADEANIPADHVYEVNMSEKTNALNAYVTGIGA 252

Query: 243 NKRIVLFDTLLK 254
           NKRIVL+DT L 
Sbjct: 253 NKRIVLWDTTLN 264

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
283483330	452	putative CAAX prenyl protease [Chorthipp	0.827	0.539	0.458	7e-62
432936822	467	PREDICTED: CAAX prenyl protease 1 homolo	0.823	0.520	0.415	9e-61
351715982	445	CAAX prenyl protease 1-like protein [Het	0.857	0.568	0.438	2e-60
348531547	467	PREDICTED: CAAX prenyl protease 1 homolo	0.823	0.520	0.412	5e-58
328719038	450	PREDICTED: CAAX prenyl protease 1 homolo	0.803	0.526	0.420	6e-57
321461065	445	hypothetical protein DAPPUDRAFT_308569 [	0.783	0.519	0.405	1e-53
41054035	468	CAAX prenyl protease 1 homolog [Danio re	0.840	0.529	0.393	1e-52
182891830	468	Zmpste24 protein [Danio rerio]	0.840	0.529	0.393	1e-52
94732932	468	novel protein (zgc:55655) [Danio rerio]	0.840	0.529	0.393	2e-52
443722683	459	hypothetical protein CAPTEDRAFT_171238 [	0.840	0.540	0.379	2e-52

>gi|283483330|emb|CAX20735.1| putative CAAX prenyl protease [Chorthippus parallelus]

 Score =  243 bits (620), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 144/314 (45%), Positives = 181/314 (57%), Gaps = 70/314 (22%)

Query: 50  FTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETT--------IVPHQI-----AHGM 96
           FT + +IFYGI+ F  I FL+E YLSIRQ  VY            I+ H+       +G+
Sbjct: 2   FTEQQKIFYGILTFMIIEFLWELYLSIRQHHVYERAVRVPDELKDILTHETYEKARIYGL 61

Query: 97  DAESFEKSRR-------------------YSLDKNVFSMF-----KETVSNVM------- 125
           D  +F   +                    + L   + S F      E + +VM       
Sbjct: 62  DKCTFTIVKDIFGMVLSVAIMLFDGIPYFWDLSTRIISAFGYGSHNEILQSVMFGFILYT 121

Query: 126 ------------NT------------TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVG 161
                       NT            T GFFVKD++KSF VS ++  PL  ++VYI+Q+G
Sbjct: 122 FSTIINLPLVVYNTFVLEKKHGFNKQTVGFFVKDKLKSFAVSQVIFTPLLASMVYIVQIG 181

Query: 162 GNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKL 221
           G   FLYLW+F +LMS+FL+TIYP +IAPLFDKYTPLPDGELK++IE+L+AS+ FPL KL
Sbjct: 182 GKYFFLYLWIFSVLMSVFLLTIYPNYIAPLFDKYTPLPDGELKTKIEKLAASIDFPLYKL 241

Query: 222 YVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANK 281
           YVVEGSKRS HSNAYFYGFFKNKRIVLFDTLLKDY P N    +   + +    +    K
Sbjct: 242 YVVEGSKRSTHSNAYFYGFFKNKRIVLFDTLLKDYTPENKSPGEHKPEEQE--KSPTGEK 299

Query: 282 KGCDTEEVLAVLAH 295
           KGCDT+EVLAVL H
Sbjct: 300 KGCDTDEVLAVLGH 313

Source: Chorthippus parallelus

Species: Chorthippus parallelus

Genus: Chorthippus

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|432936822|ref|XP_004082296.1| PREDICTED: CAAX prenyl protease 1 homolog [Oryzias latipes]

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 136/327 (41%), Positives = 187/327 (57%), Gaps = 84/327 (25%)

Query: 48  MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRY 107
           +   +E QIFY ++ FSW V+L+E YLS RQRR Y  TT VP ++   MD+E+FEKSR Y
Sbjct: 6   LNLPVEKQIFYAVLAFSWTVYLWEAYLSYRQRRTYRSTTHVPQELGKIMDSETFEKSRLY 65

Query: 108 SLDKNVFS----MFKET----------------VSNVMNTTYGFFVKDQIKSFIVSLILS 147
            LDK+ FS    ++ ET                ++  +   +GF  + +I   +V L L+
Sbjct: 66  QLDKSNFSFWSGLYSETEGTLILLLGGIPFLWDIAGSLAARFGFTPEHEITQSLVFLTLA 125

Query: 148 ------------------------------------------------IPLTGAVVYIIQ 159
                                                           +P+T  ++YII+
Sbjct: 126 TLFSALTGLPWSLYNTFVIEEKHGFNQQTLGFFFKDAVKKFVVTQCILLPVTSLLLYIIK 185

Query: 160 VGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLK 219
           +GG+  F+Y W+F + +SL L+TIY ++IAPLFDK+TPLP+GELK+ IE ++ S+ FPL 
Sbjct: 186 IGGDYFFIYAWLFTLAVSLVLVTIYADYIAPLFDKFTPLPEGELKTAIEDMAKSISFPLT 245

Query: 220 KLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLIS---- 275
           K+YVVEGSKRS HSNAYFYGFFKNKRIVLFDTLL+DY PLN     K+G+S+P  +    
Sbjct: 246 KIYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSPLN-----KAGESQPEETENDE 300

Query: 276 ------TEGANKK-GCDTEEVLAVLAH 295
                 T+  NKK GC+ +E+LAVL H
Sbjct: 301 TVSESKTKPKNKKQGCNNQEILAVLGH 327

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|351715982|gb|EHB18901.1| CAAX prenyl protease 1-like protein [Heterocephalus glaber]

 Score =  238 bits (608), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/303 (43%), Positives = 182/303 (60%), Gaps = 50/303 (16%)

Query: 42  WA-VNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAES 100
           WA ++   E   E  IF  ++ FSW V+L+E +L+ RQRR+Y  TT VP ++   MD+E+
Sbjct: 4   WASLDAMWELPAEKVIFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELEQIMDSET 63

Query: 101 FEKSRRYSLDKNVFSMFKETVSNVMNT--------------------------------- 127
           FEKSR Y LDK+ FS +    S V  T                                 
Sbjct: 64  FEKSRLYQLDKSTFSFWSGLYSEVEGTIIHSLVFLLLATLFSALTGLPWSLYNTFVIEEK 123

Query: 128 ------TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLM 181
                 T  FF+KD IK F+V+  + +P++  ++YII++GG+  F+Y W+F +++SL L+
Sbjct: 124 HGFNHQTLDFFMKDAIKKFLVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLV 183

Query: 182 TIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFF 241
           TIY ++IAPLFDK+TPLP+G+LK  IE ++ ++ FPL K+YVVEGSKRS  SNAYFYGFF
Sbjct: 184 TIYADYIAPLFDKFTPLPEGKLKQEIEVMAKNIDFPLTKVYVVEGSKRSP-SNAYFYGFF 242

Query: 242 KNKRIVLFDTLLKDYVPLNAD---------KKDKSGDSEPLISTEGANKKGCDTEEVLAV 292
           KNKRIVLFDTLL++Y   N D         + D  GDSE + +     K+GC  EEVLAV
Sbjct: 243 KNKRIVLFDTLLEEYSVPNKDIQEESGMEPRSDGEGDSEEIKAKVKIKKQGCKNEEVLAV 302

Query: 293 LAH 295
           L H
Sbjct: 303 LGH 305

Source: Heterocephalus glaber

Species: Heterocephalus glaber

Genus: Heterocephalus

Family: Bathyergidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348531547|ref|XP_003453270.1| PREDICTED: CAAX prenyl protease 1 homolog [Oreochromis niloticus]

 Score =  230 bits (587), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/327 (41%), Positives = 186/327 (56%), Gaps = 84/327 (25%)

Query: 48  MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRY 107
           ++  +E QIFY ++GFSW V+L+E YLS RQRR+Y  TT VP ++   MD+E+FEKSR Y
Sbjct: 6   VDLPVEKQIFYAVLGFSWTVYLWEAYLSYRQRRIYRTTTHVPQELGKIMDSETFEKSRLY 65

Query: 108 SLDKNVFS----MFKET----------------VSNVMNTTYGFFVKDQIKSFIVSLILS 147
            LDK+ FS    ++ ET                V+  +   +GF  + +I   +V L L+
Sbjct: 66  QLDKSNFSFWSGLYSETEGTLILLLGGIPFLWAVAGSVTARFGFGPEYEITQSLVFLTLA 125

Query: 148 --------IPLTGAVVYIIQ---------------------------------------- 159
                   +P +    ++I+                                        
Sbjct: 126 TLFSAITGLPWSLYNTFVIEEKHGFNQQTLGFFLKDAVKKFAVTQCILLPVTSLLLYIIK 185

Query: 160 VGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLK 219
           +GG+  F+Y W+F +++SL L+TIY ++IAPLFDK+TPLPDGELK+ IE ++ S+ FPL 
Sbjct: 186 IGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPDGELKTDIEAMAKSISFPLT 245

Query: 220 KLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEP------L 273
           K+YVVEGSKRS HSNAYFYGFFKNKRIVLFDTLL+DY PLN     K+G+S+P       
Sbjct: 246 KIYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSPLN-----KAGESQPEQPESDE 300

Query: 274 ISTEGA-----NKKGCDTEEVLAVLAH 295
            S+E        K+GC+  E+LAVL H
Sbjct: 301 TSSESKAKPKNKKQGCNNPEILAVLGH 327

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328719038|ref|XP_001949388.2| PREDICTED: CAAX prenyl protease 1 homolog isoform 1 [Acyrthosiphon pisum]

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 181/314 (57%), Gaps = 77/314 (24%)

Query: 53  EFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQI-------------AHGMDAE 99
           EF +FYG++ FSWI FL+E YL++RQRRVY  T  +P ++             ++G+D  
Sbjct: 4   EFCVFYGVLTFSWIEFLWEQYLTLRQRRVYKTTDKIPERLTGVLDVETFIKAKSYGIDKN 63

Query: 100 SFE--------------------------------KSRRYS---LDKNVFSMFKETVSNV 124
           SF                                 ++R Y    +   VF +   T+  +
Sbjct: 64  SFSIAEEWFHMIISTGFICLNGFTLLWNFSKYCLIETRYYDSEIMTSCVFLLCMNTLGTL 123

Query: 125 MN-------------------TTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMV 165
           M+                    T  FFVKD+IK+F++  ++S+P+T A + I++ GG   
Sbjct: 124 MSLPISAYSTFIIEEKHGFNKQTLNFFVKDKIKNFLLVQVISLPITAAAITIVKWGGRYF 183

Query: 166 FLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVE 225
           F++LWVF ++ SLF+MTIYPEFIAPLFDKYTPLPDG LK++IE+L+  VKFPL K+Y+VE
Sbjct: 184 FIWLWVFAVVTSLFIMTIYPEFIAPLFDKYTPLPDGVLKTKIEELAKQVKFPLYKIYIVE 243

Query: 226 GSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADK----KDKSGDSEPLISTEGANK 281
           GSKRS HSNAYFYGFF NKRIVL+DTLLKD   +  +K    ++  GD    I  +G   
Sbjct: 244 GSKRSAHSNAYFYGFFNNKRIVLYDTLLKDSKDIMNNKTIIDENAQGDK---IEEKG--- 297

Query: 282 KGCDTEEVLAVLAH 295
           KG + EE+LAVL H
Sbjct: 298 KGMNDEEILAVLGH 311

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321461065|gb|EFX72100.1| hypothetical protein DAPPUDRAFT_308569 [Daphnia pulex]

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/308 (40%), Positives = 171/308 (55%), Gaps = 77/308 (25%)

Query: 56  IFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQ------------------------ 91
           IF  +  F W+ F +E YLS RQ +VY +++  P +                        
Sbjct: 9   IFQSVFTFIWLEFSWEMYLSYRQHQVYKKSSKPPQELEEHFNNETFQKARLYGLDKSGYG 68

Query: 92  IAHGMDAESFEK--------------------SRRYSLDKN-----VFSMFKETVSNVMN 126
           IAHG+  + F                      +   S D       VF++   T S +++
Sbjct: 69  IAHGLFNQIFSTVLILLNGHAYFWNLSCSVLLASGLSADSEIITSMVFTVILSTFSTLVD 128

Query: 127 -------------------TTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFL 167
                               T GFF+KD IK +I+ +++S+PL  AV++I+Q GG+  FL
Sbjct: 129 MPFTIYYTFWLEERHGFNKQTPGFFIKDSIKKYILGILISLPLVAAVIFIVQSGGDYFFL 188

Query: 168 YLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGS 227
           YLW+F+ L+ + LMT+YP++IAPLFDKY+PL +GELKS+IE+L+AS+ FPLKKLYVVEGS
Sbjct: 189 YLWIFVTLVIVLLMTVYPDYIAPLFDKYSPLQEGELKSQIEKLAASIDFPLKKLYVVEGS 248

Query: 228 KRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTE 287
           KRS HSNAYFYGFF NKRIVLFDTL++ YV   ++  D         ST    KKGC+  
Sbjct: 249 KRSSHSNAYFYGFFNNKRIVLFDTLIEGYVKEESETTD---------STTKPPKKGCNNP 299

Query: 288 EVLAVLAH 295
           E+LAVL H
Sbjct: 300 EILAVLGH 307

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|41054035|ref|NP_956186.1| CAAX prenyl protease 1 homolog [Danio rerio] gi|28422776|gb|AAH46884.1| Zinc metallopeptidase, STE24 homolog [Danio rerio]

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/323 (39%), Positives = 179/323 (55%), Gaps = 75/323 (23%)

Query: 48  MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQR-------------------------RVY 82
           +  ++E +IFY ++ FSW V+++E YL+ RQR                         R+Y
Sbjct: 6   LALSVEDKIFYAVLFFSWTVYVWEAYLAYRQRKIYRATVHVPTELGKIMDSETFEKSRLY 65

Query: 83  H----------------ETTIV-------------PHQIAHGMDAESFEKSRR--YSLDK 111
                            E T++              H  AH      +E S+   + +  
Sbjct: 66  QLDKSNFGFWSGLYSEFEGTLILLLGGIPFLWKLSGHLTAHFGFGPEYEISQSLVFLMLA 125

Query: 112 NVFSMFKETVSNVMNT------------TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQ 159
            +FS F     ++ NT            T GFF+KD +K F V+  + +P+T  ++YII+
Sbjct: 126 TLFSAFTGLPWSLYNTFVIEEKHGFNQQTLGFFLKDALKKFAVTQCILVPVTSLLLYIIK 185

Query: 160 VGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLK 219
           +GG+  F+Y W+F  ++SL L+TIY ++IAPLFDK+TPLPDGEL+S IE ++ S+ FPL 
Sbjct: 186 IGGDYFFIYAWLFTFIVSLILVTIYADYIAPLFDKFTPLPDGELRSEIESMAKSISFPLT 245

Query: 220 KLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSG---DSEPLIST 276
           KLYVVEGSKRS HSNAYFYGFFKNKRIVLFDTLL+DY PLN   + + G   ++E +++ 
Sbjct: 246 KLYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSPLNQSGEKEPGTGEENEAVVNE 305

Query: 277 EGA----NKKGCDTEEVLAVLAH 295
             A     K+GC   EVLAVL H
Sbjct: 306 SKAKPKNKKQGCSNPEVLAVLGH 328

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|182891830|gb|AAI65348.1| Zmpste24 protein [Danio rerio]

 Score =  212 bits (540), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/323 (39%), Positives = 179/323 (55%), Gaps = 75/323 (23%)

Query: 48  MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQR-------------------------RVY 82
           +  ++E +IFY ++ FSW V+++E YL+ RQR                         R+Y
Sbjct: 6   LALSVEDKIFYAVLFFSWTVYVWEAYLAYRQRKIYRATVHVPTELGKIMDSETFEKSRLY 65

Query: 83  H----------------ETTIV-------------PHQIAHGMDAESFEKSRR--YSLDK 111
                            E T++              H  AH      +E S+   + +  
Sbjct: 66  QLDKSNFGFWSGLYSEFEGTLILLLGGIPFLWKLSGHLTAHFGFGPEYEISQSLVFLMLA 125

Query: 112 NVFSMFKETVSNVMNT------------TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQ 159
            +FS F     ++ NT            T GFF+KD +K F V+  + +P+T  ++YII+
Sbjct: 126 TLFSAFTGLPWSLYNTFVIEEKHGFNQPTLGFFLKDALKKFAVTQCILVPVTSLLLYIIK 185

Query: 160 VGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLK 219
           +GG+  F+Y W+F  ++SL L+TIY ++IAPLFDK+TPLPDGEL+S IE ++ S+ FPL 
Sbjct: 186 IGGDYFFIYAWLFTFIVSLILVTIYADYIAPLFDKFTPLPDGELRSEIESMAKSISFPLT 245

Query: 220 KLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSG---DSEPLIST 276
           KLYVVEGSKRS HSNAYFYGFFKNKRIVLFDTLL+DY PLN   + + G   ++E +++ 
Sbjct: 246 KLYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSPLNQSGEKEPGTGEENEAVVNE 305

Query: 277 EGA----NKKGCDTEEVLAVLAH 295
             A     K+GC   EVLAVL H
Sbjct: 306 SKAKPKNKKQGCSNPEVLAVLGH 328

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|94732932|emb|CAK04159.1| novel protein (zgc:55655) [Danio rerio]

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/323 (39%), Positives = 179/323 (55%), Gaps = 75/323 (23%)

Query: 48  MEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQR-------------------------RVY 82
           +  ++E +IFY ++ FSW V+++E YL+ RQR                         R+Y
Sbjct: 6   LALSVEDKIFYAVLFFSWTVYVWEAYLAYRQRKIYRATVHVPTELGKIMDSETFEKSRLY 65

Query: 83  H----------------ETTIV-------------PHQIAHGMDAESFEKSRR--YSLDK 111
                            E T++              H  AH      +E S+   + +  
Sbjct: 66  QLDKSNFGFWSGLYSEFEGTLILLLGGIPFLWKLSGHLTAHFGFGPEYEISQSLVFLMLA 125

Query: 112 NVFSMFKETVSNVMNT------------TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQ 159
            +FS F     ++ NT            T GFF+KD +K F V+  + +P+T  ++YII+
Sbjct: 126 TLFSAFTGLPWSLYNTFVIEEKHGFNQQTLGFFLKDALKKFAVTQCILLPVTSLLLYIIK 185

Query: 160 VGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLK 219
           +GG+  F+Y W+F  ++SL L+TIY ++IAPLFDK+TPLPDGEL+S IE ++ S+ FPL 
Sbjct: 186 IGGDYFFIYAWLFTFIVSLILVTIYADYIAPLFDKFTPLPDGELRSEIESMAKSISFPLT 245

Query: 220 KLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSG---DSEPLIST 276
           KLYVVEGSKRS HSNAYFYGFFKNKRIVLFDTLL+DY PLN   + + G   ++E +++ 
Sbjct: 246 KLYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSPLNQSGEKEPGTGEENEAVVNE 305

Query: 277 EGA----NKKGCDTEEVLAVLAH 295
             A     K+GC   EVLAVL H
Sbjct: 306 SKAKPKNKKQGCSNPEVLAVLGH 328

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|443722683|gb|ELU11443.1| hypothetical protein CAPTEDRAFT_171238 [Capitella teleta]

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 183/324 (56%), Gaps = 76/324 (23%)

Query: 46  LKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETT-IVPHQIAHGMDAESFEKS 104
           + ME + E  IF  ++ F W+V+++E YLS RQR +Y  +   +P ++   ++ E+FEK+
Sbjct: 1   MSMELSSE-DIFNAVLAFLWVVYVWETYLSYRQRELYRSSVGKIPVELDGVLEEETFEKA 59

Query: 105 RRYSLDKNVF-------------------------------------------------- 114
           R Y+LD++VF                                                  
Sbjct: 60  RLYNLDRSVFGFWSGLYSQITTSLILVFGGIPFLWRISGSLIAQFGLDAEYEITQSMVFL 119

Query: 115 --SMFKETVSNVMNTTYGFFVKDQIKSF------------IVSLILSIPLT----GAVVY 156
             S+   T+  +  + Y  FV +++  F            +  L++S+ L      A++Y
Sbjct: 120 VGSVLYSTIDGLPWSIYSTFVIEELHGFNKQTLGFFFKDMVKKLVVSLALALPIIAALLY 179

Query: 157 IIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKF 216
           II++GG+  F+Y+W+F + +SL L+T+Y ++IAPLFDK+TPLPDG+LKS+IE L+A + F
Sbjct: 180 IIKIGGDYFFVYVWMFTLFISLSLITVYADYIAPLFDKFTPLPDGDLKSQIESLAAGIDF 239

Query: 217 PLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDK-----SGDSE 271
           PLKKL+VVEGSKRS HSNAYFYGFFKNKRIVLFDTLL+D+ P+N + ++      S + E
Sbjct: 240 PLKKLFVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDFAPMNKESEEAKPEVPSPEGE 299

Query: 272 PLISTEGANKKGCDTEEVLAVLAH 295
            L   E   K GC+  E+LAVL H
Sbjct: 300 KLGDKE-KKKIGCNNNEILAVLGH 322

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
ZFIN|ZDB-GENE-030131-6312	468	zmpste24 "zinc metallopeptidas	0.569	0.358	0.582	1.6e-67
UNIPROTKB|F1PY82	473	ZMPSTE24 "Uncharacterized prot	0.569	0.355	0.559	2.6e-67
UNIPROTKB|F1NDA2	468	ZMPSTE24 "Uncharacterized prot	0.569	0.358	0.579	3.3e-67
UNIPROTKB|E1BMF2	475	ZMPSTE24 "Uncharacterized prot	0.569	0.353	0.553	8.7e-67
UNIPROTKB|O75844	475	ZMPSTE24 "CAAX prenyl protease	0.566	0.351	0.567	3.7e-66
MGI|MGI:1890508	475	Zmpste24 "zinc metallopeptidas	0.569	0.353	0.548	7.7e-66
RGD|1305570	475	Zmpste24 "zinc metallopeptidas	0.569	0.353	0.548	9.8e-66
FB|FBgn0034176	451	ste24a "prenyl protease type I	0.583	0.381	0.543	3.7e-54
WB|WBGene00001405	442	fce-1 [Caenorhabditis elegans	0.722	0.481	0.439	3.2e-42
CGD|CAL0000665	456	STE24 [Candida albicans (taxid	0.430	0.278	0.488	1.8e-41

ZFIN|ZDB-GENE-030131-6312 zmpste24 "zinc metallopeptidase, STE24 homolog" [Danio rerio (taxid:7955)]

 Score = 530 (191.6 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
 Identities = 102/175 (58%), Positives = 134/175 (76%)

Query:   128 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 187
             T GFF+KD +K F V+  + +P+T  ++YII++GG+  F+Y W+F  ++SL L+TIY ++
Sbjct:   154 TLGFFLKDALKKFAVTQCILVPVTSLLLYIIKIGGDYFFIYAWLFTFIVSLILVTIYADY 213

Query:   188 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV 247
             IAPLFDK+TPLPDGEL+S IE ++ S+ FPL KLYVVEGSKRS HSNAYFYGFFKNKRIV
Sbjct:   214 IAPLFDKFTPLPDGELRSEIESMAKSISFPLTKLYVVEGSKRSSHSNAYFYGFFKNKRIV 273

Query:   248 LFDTLLKDYVPLN--ADKKDKSGD-SEPLISTEGA---NKK-GCDTEEVLAVLAH 295
             LFDTLL+DY PLN   +K+  +G+ +E +++   A   NKK GC   EVLAVL H
Sbjct:   274 LFDTLLEDYSPLNQSGEKEPGTGEENEAVVNESKAKPKNKKQGCSNPEVLAVLGH 328

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0071586 "CAAX-box protein processing" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

UNIPROTKB|F1PY82 ZMPSTE24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 519 (187.8 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
 Identities = 99/177 (55%), Positives = 132/177 (74%)

Query:   128 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 187
             T GFF+KD +K FIV+  + +P++  ++YII++GG+  F+Y W+F +++SL L+TIY ++
Sbjct:   157 TLGFFMKDAVKKFIVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADY 216

Query:   188 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV 247
             IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKRIV
Sbjct:   217 IAPLFDKFTPLPEGKLKQEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIV 276

Query:   248 LFDTLLKDYVPLNAD---------KKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH 295
             LFDTLL++Y  LN D         +KD  GDSE + +     K+GC  EEVLAVL H
Sbjct:   277 LFDTLLEEYSVLNKDILEESGMEPRKDGEGDSEEIKAKVKNKKQGCKNEEVLAVLGH 333

GO:0030327 "prenylated protein catabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006998 "nuclear envelope organization" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0071586 "CAAX-box protein processing" evidence=IEA

UNIPROTKB|F1NDA2 ZMPSTE24 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 521 (188.5 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
 Identities = 98/169 (57%), Positives = 129/169 (76%)

Query:   128 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 187
             T GFF KD IK FIV+  + +P+T  ++YII++GG+  F+Y W+F +++SL L+TIY ++
Sbjct:   160 TLGFFFKDAIKKFIVTQCILLPVTSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADY 219

Query:   188 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV 247
             IAPLFDK+ PLP+GELK +IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKRIV
Sbjct:   220 IAPLFDKFIPLPEGELKQQIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIV 279

Query:   248 LFDTLLKDYVPLNADKKD-KSGDSEPLISTEGANKKGCDTEEVLAVLAH 295
             LFDTLL+DY  LN +  + + G++E   S     K+GC  EEVLAVL H
Sbjct:   280 LFDTLLEDYSALNKEPVEGEEGENEETKSKTKNKKQGCKNEEVLAVLGH 328

GO:0071586 "CAAX-box protein processing" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0006998 "nuclear envelope organization" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030327 "prenylated protein catabolic process" evidence=IEA

UNIPROTKB|E1BMF2 ZMPSTE24 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 514 (186.0 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
 Identities = 98/177 (55%), Positives = 131/177 (74%)

Query:   128 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 187
             T GFF+KD IK F+V+  + +P++  ++YII++GG+  F+Y W+F +++SL L+TIY ++
Sbjct:   159 TLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADY 218

Query:   188 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV 247
             IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKRIV
Sbjct:   219 IAPLFDKFTPLPEGKLKQEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIV 278

Query:   248 LFDTLLKDYVPLNAD---------KKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH 295
             LFDTLL++Y  LN D         + D  GDSE + +     K+GC  EEVLAVL H
Sbjct:   279 LFDTLLEEYSVLNKDIQEESGMEPRNDGEGDSEEIKAKVKNKKQGCKNEEVLAVLGH 335

GO:0030327 "prenylated protein catabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006998 "nuclear envelope organization" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0071586 "CAAX-box protein processing" evidence=IEA

UNIPROTKB|O75844 ZMPSTE24 "CAAX prenyl protease 1 homolog" [Homo sapiens (taxid:9606)]

 Score = 511 (184.9 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
 Identities = 101/178 (56%), Positives = 132/178 (74%)

Query:   128 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 187
             T GFF+KD IK F+V+  + +P++  ++YII++GG+  F+Y W+F +++SL L+TIY ++
Sbjct:   159 TLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADY 218

Query:   188 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV 247
             IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKRIV
Sbjct:   219 IAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIV 278

Query:   248 LFDTLLKDYVPLNADKKDKSGDSEPLISTEG---------ANKK-GCDTEEVLAVLAH 295
             LFDTLL++Y  LN D ++ SG  EP    EG          NKK GC  EEVLAVL H
Sbjct:   279 LFDTLLEEYSVLNKDIQEDSG-MEPRNEEEGNSEEIKAKVKNKKQGCKNEEVLAVLGH 335

GO:0071586 "CAAX-box protein processing" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0006998 "nuclear envelope organization" evidence=IEA

GO:0030327 "prenylated protein catabolic process" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=TAS

GO:0008235 "metalloexopeptidase activity" evidence=TAS

MGI|MGI:1890508 Zmpste24 "zinc metallopeptidase, STE24" [Mus musculus (taxid:10090)]

 Score = 501 (181.4 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
 Identities = 97/177 (54%), Positives = 131/177 (74%)

Query:   128 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 187
             T  FF+KD IK FIV+  + +P++  ++YII++GG+  F+Y W+F +++SL L+TIY ++
Sbjct:   159 TLEFFMKDAIKKFIVTQCILLPVSALLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADY 218

Query:   188 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV 247
             IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKRIV
Sbjct:   219 IAPLFDKFTPLPEGKLKQEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIV 278

Query:   248 LFDTLLKDYVPLNADKKDKSG---------DSEPLISTEGANKKGCDTEEVLAVLAH 295
             LFDTLL++Y   N D +++SG         DSE + +     K+GC  EEVLAVL H
Sbjct:   279 LFDTLLEEYSVPNKDNQEESGMEARNEGEGDSEEVKAKVKNKKQGCKNEEVLAVLGH 335

GO:0004222 "metalloendopeptidase activity" evidence=IMP;IDA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0006998 "nuclear envelope organization" evidence=IGI;IMP

GO:0008152 "metabolic process" evidence=IMP

GO:0008233 "peptidase activity" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0030327 "prenylated protein catabolic process" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1305570 Zmpste24 "zinc metallopeptidase STE24" [Rattus norvegicus (taxid:10116)]

 Score = 500 (181.1 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
 Identities = 97/177 (54%), Positives = 130/177 (73%)

Query:   128 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 187
             T  FF+KD IK FIV+  + +P++  ++YII++GG+  F+Y W+F +++SL L+TIY ++
Sbjct:   159 TLEFFMKDAIKKFIVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADY 218

Query:   188 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV 247
             IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKRIV
Sbjct:   219 IAPLFDKFTPLPEGKLKQEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIV 278

Query:   248 LFDTLLKDYVPLNADKKDK---------SGDSEPLISTEGANKKGCDTEEVLAVLAH 295
             LFDTLL++Y   N D +++          GDSE + S     K+GC  EEVLAVL H
Sbjct:   279 LFDTLLEEYSVPNKDNQEEPGLEPRNEGEGDSEEVKSKVKNKKQGCKNEEVLAVLGH 335

GO:0003674 "molecular_function" evidence=ND

GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0006998 "nuclear envelope organization" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=ISO

GO:0016020 "membrane" evidence=IEA;ISO

GO:0030327 "prenylated protein catabolic process" evidence=IEA;ISO

GO:0071586 "CAAX-box protein processing" evidence=IEA

FB|FBgn0034176 ste24a "prenyl protease type I" [Drosophila melanogaster (taxid:7227)]

 Score = 467 (169.5 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
 Identities = 100/184 (54%), Positives = 127/184 (69%)

Query:   113 VFSMFK-ETVSNVMNTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWV 171
             ++ +F  E        T  FF  DQ+K F+V+ +L IP+T A+++I+Q GG+  F++LW+
Sbjct:   134 IYKIFVLEETHGFNKQTARFFAWDQLKGFLVTQVLMIPITAAIIFIVQRGGDNFFIWLWI 193

Query:   172 FIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSE 231
             F  ++SL L+T+YP FIAPLFDKYTPL  G L+  IE L+AS+KFPL KL+VVEGSKRS 
Sbjct:   194 FTGVISLVLLTLYPIFIAPLFDKYTPLEKGALRQSIEDLAASLKFPLTKLFVVEGSKRSS 253

Query:   232 HSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLA 291
             HSNAYFYG + +KRIVLFDTLL     LN  K D   DSE  +S E   K GC  EEVLA
Sbjct:   254 HSNAYFYGLWNSKRIVLFDTLL-----LNKGKPD---DSE--LSEEEKGK-GCTDEEVLA 302

Query:   292 VLAH 295
             VL H
Sbjct:   303 VLGH 306

GO:0004222 "metalloendopeptidase activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0071586 "CAAX-box protein processing" evidence=IEA

WB|WBGene00001405 fce-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 95/216 (43%), Positives = 135/216 (62%)

Query:    81 VYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFK-ETVSNVMNTTYGFFVKDQIKS 139
             +++ T   P  +A  +   S  ++    L  +++S F  E        T GF+  D+IK 
Sbjct:    88 LWYATASYPLHVAVFLSINSIIETI-IDLPWDLYSTFIIEDAHGFNKQTIGFYFVDKIKK 146

Query:   140 FIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLP 199
              +V   L++P+   + +II  GG   F+Y+W+F+ ++ L LMTIYP FIAPLFDKY PLP
Sbjct:   147 MLVGFALTMPIVYGIEWIIVNGGPYFFVYIWLFVSVVVLLLMTIYPTFIAPLFDKYFPLP 206

Query:   200 DGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPL 259
             DG+LK++IEQL+AS+ +PL +LYVV GSKRS HSNAY YGF+KNKRIVL+DTLL      
Sbjct:   207 DGDLKTKIEQLAASLSYPLTELYVVNGSKRSAHSNAYMYGFWKNKRIVLYDTLLSGAEKE 266

Query:   260 NADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH 295
                +   +   E +  TE   K+G + +EV+AVL H
Sbjct:   267 KVHELYVAA-GEKIEETENDKKRGMNNDEVVAVLGH 301

GO:0004222 "metalloendopeptidase activity" evidence=IEA;IDA

GO:0016020 "membrane" evidence=IEA;IDA

GO:0006508 "proteolysis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0071586 "CAAX-box protein processing" evidence=IDA

CGD|CAL0000665 STE24 [Candida albicans (taxid:5476)]

 Score = 312 (114.9 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
 Identities = 62/127 (48%), Positives = 86/127 (67%)

Query:   128 TYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEF 187
             T G +V D +K   +S++L  P+    + II    +    YL  FI++++L  MTI P  
Sbjct:   172 TIGLWVSDMLKGIGISIVLGSPVIAGFLKIIDYFDDKFIFYLMGFILVVNLIAMTIVPTL 231

Query:   188 IAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIV 247
             I PLF+K+TPL DGELK+ IE+L+   KFPL KL+V++GSKRS HSNAYF G   +K+IV
Sbjct:   232 IMPLFNKFTPLEDGELKTAIEKLALEQKFPLTKLFVIDGSKRSSHSNAYFTGLPWSKQIV 291

Query:   248 LFDTLLK 254
             LFDTL++
Sbjct:   292 LFDTLIE 298

GO:0005886 "plasma membrane" evidence=IDA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0005637 "nuclear inner membrane" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0007323 "peptide pheromone maturation" evidence=IEA

GO:0071586 "CAAX-box protein processing" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8RX88	FACE1_ARATH	3, ., 4, ., 2, 4, ., 8, 4	0.5467	0.4474	0.3113	yes	N/A
Q6EPN8	FACE1_ORYSJ	3, ., 4, ., 2, 4, ., 8, 4	0.5625	0.4338	0.3011	yes	N/A
Q80W54	FACE1_MOUSE	3, ., 4, ., 2, 4, ., 8, 4	0.5418	0.5762	0.3578	yes	N/A
O75844	FACE1_HUMAN	3, ., 4, ., 2, 4, ., 8, 4	0.5363	0.5762	0.3578	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.24.84	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	295
pfam01435	223	pfam01435, Peptidase_M48, Peptidase family M48	7e-17

>gnl|CDD|216503 pfam01435, Peptidase_M48, Peptidase family M48

 Score = 77.5 bits (191), Expect = 7e-17
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 172 FIILMSLFLMTIYPEFIAPLFDK-YTPLPDGELKSRIEQLSASV--KFPLKKLYVVEGSK 228
            ++L SL L TI   +IA L +   TPL +  L+  +E+L+ S    FP  ++YVV+   
Sbjct: 2   LLLLSSLVLATIGAPYIAQLLNGFPTPLRNARLQRVVERLADSAGAGFPPWEVYVVD--- 58

Query: 229 RSEHSNAYFYGFFKNKRIVLFDTLL 253
            S   NA+  G  KNKR+V+   LL
Sbjct: 59  -SPQPNAFALGGGKNKRVVVTTGLL 82

Length = 223

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	295
KOG2719|consensus	428		100.0
PRK03001	283	M48 family peptidase; Provisional	99.91
PRK03982	288	heat shock protein HtpX; Provisional	99.89
PRK01265	324	heat shock protein HtpX; Provisional	99.82
PRK01345	317	heat shock protein HtpX; Provisional	99.74
PRK04897	298	heat shock protein HtpX; Provisional	99.72
PRK02391	296	heat shock protein HtpX; Provisional	99.72
PRK03072	288	heat shock protein HtpX; Provisional	99.71
PRK02870	336	heat shock protein HtpX; Provisional	99.7
PRK05457	284	heat shock protein HtpX; Provisional	99.58
PF01435	226	Peptidase_M48: Peptidase family M48 This is family	99.5
COG0501	302	HtpX Zn-dependent protease with chaperone function	99.05
PF05569	299	Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR0	96.83
COG4783	484	Putative Zn-dependent protease, contains TPR repea	95.05
KOG2661|consensus	424		83.65
COG4219	337	MecR1 Antirepressor regulating drug resistance, pr	80.48

>KOG2719|consensus

Probab=100.00  E-value=3.1e-51  Score=398.06  Aligned_cols=219  Identities=48%  Similarity=0.829  Sum_probs=209.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCCCCchhccCCCHHHHHHHHHHhHhhhhHHhHHHHHHHH-------
Q psy7467          52 LEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNV-------  124 (295)
Q Consensus        52 ~p~~~~~~il~~~~~~~l~e~yL~~RQ~r~~~~~~~vP~~l~~~~s~e~f~Ks~~Y~~~k~~f~~~~~l~~~i-------  124 (295)
                      |...++.++++++++.+.||+||..||+++++++..+|+++++++|+|+|+|||.|++||..|++++..++.+       
T Consensus         4 ~~~~~~~~i~~f~i~~~~~~~yl~~Rq~~~~~~~~~~p~el~~~~~~et~~kar~y~~~k~~f~i~~~~~~~~~~~l~~L   83 (428)
T KOG2719|consen    4 DAMCRKSIILFFSIFLYLFETYLTERQLKVLKRTKLVPKELGGIIDQETFKKARSYERDKSIFSIFNLLLSLVLLLLLEL   83 (428)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchHhhcCCCHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence            3366788999999999999999999999999998889999999999999999999999999999999999983       


Q ss_pred             --------------------------------------------------------hc-CChHHHHHHHHHHHHHHHHHH
Q psy7467         125 --------------------------------------------------------MN-TTYGFFVKDQIKSFIVSLILS  147 (295)
Q Consensus       125 --------------------------------------------------------FN-~T~~~fl~D~lK~~lL~~vl~  147 (295)
                                                                              || +|.+.|++|.+|+.+++++++
T Consensus        84 ~~g~~~~lw~lt~~~~~~~~~~~~s~vF~~~~s~~~~l~~LP~~iys~fvie~~~gfnk~t~~~~~~d~lk~~~v~~~l~  163 (428)
T KOG2719|consen   84 YLGALPFLWKLTGKFLGKAGEIWLSLVFLLLLSIYSTLLDLPSSIYSTFVLEEKHGFNKQTLSLFIIDGLKSLLVGVVLT  163 (428)
T ss_pred             HHhHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhccHHHHHHHHHHhhcCCCcCcchhHHHHHHHHHHHHHHHH
Confidence                                                                    88 899999999999999999999


Q ss_pred             HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhhhhHhhhhCCCccCCCchHHHHHHHHHHhCCCCCCcEEEEeCC
Q psy7467         148 IPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGS  227 (295)
Q Consensus       148 ~pl~~~~~~ii~~~G~~~wl~~w~~~~~~~l~l~~iyP~lI~PLFnkftPLedgeLr~~Ie~La~r~GFp~~~I~V~d~S  227 (295)
                      .|+++++.+++..+|++|.+|+|++.++++++++++||.+|+|+|+|++|||+|+||++||+||++.|||.++++|+|||
T Consensus       164 ~Pi~~~iv~i~~~~g~yF~i~~w~f~~v~~l~l~ti~p~~i~P~f~K~~PLe~g~l~~~Ie~la~s~gfp~~k~~vi~~s  243 (428)
T KOG2719|consen  164 IPIVAAIVMILKKFGPYFFIYLWLFYFVLSLLLLTIYPGFIAPLFGKFTPLEEGDLKEKIERLADSVGFPLSKYRVIDGS  243 (428)
T ss_pred             HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCCchHHHHHHHHHhcCCCceEEEEEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccEEEecCCCCcEEEEehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhhhhhcccC
Q psy7467         228 KRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH  295 (295)
Q Consensus       228 krS~hsNAyf~G~g~~KrIVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~EIlAVLAH  295 (295)
                      |||+||||||+|+|++|||||||||+.+                      ++   -|++||++||+||
T Consensus       244 ~rs~hsNAyfyG~~~~KRIvIyDtLl~~----------------------~~---~~~~eel~AVl~H  286 (428)
T KOG2719|consen  244 KRSSHSNAYFYGLCKNKRIVIYDTLLLE----------------------EE---HLNNEELVAVLAH  286 (428)
T ss_pred             CCCCCCCeeeeeccccceEEEehhhhhh----------------------hh---ccccHHHHHHHHH
Confidence            9999999999999999999999999951                      00   0789999999999

>PRK03001 M48 family peptidase; Provisional

Probab=99.91  E-value=3.5e-24  Score=200.47  Aligned_cols=126  Identities=15%  Similarity=0.280  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhhhhHhhhhCCCccCCCc---hHHHHHHHH
Q psy7467         134 KDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDG---ELKSRIEQL  210 (295)
Q Consensus       134 ~D~lK~~lL~~vl~~pl~~~~~~ii~~~G~~~wl~~w~~~~~~~l~l~~iyP~lI~PLFnkftPLedg---eLr~~Ie~L  210 (295)
                      +|.+|++++..+++++++.+.+++.   |.++|+|+|++.+++++++++++|.+|.|+||+ +|++++   +|++.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~l~~~~~p~L~~~v~~l   76 (283)
T PRK03001          1 FNWVKTAMLMAAITALFIVIGGMIG---GSQGMLIALLFALGMNFFSYWFSDKMVLKMYNA-QEVDENTAPQFYRMVREL   76 (283)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHh---chhhHHHHHHHHHHHHHHHHHHhHHHHHHHcCC-EECCccccHHHHHHHHHH
Confidence            3789999999999999999988876   667799999999999999999999999999998 889874   899999999


Q ss_pred             HHhCCCCCCcEEEEeCCCCCCCccEEEecCCCCc-EEEEehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhhh
Q psy7467         211 SASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNK-RIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEV  289 (295)
Q Consensus       211 a~r~GFp~~~I~V~d~SkrS~hsNAyf~G~g~~K-rIVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~EI  289 (295)
                      |+++|+|.++||++|+    +++|||++|.+++| +||++|+|++.                            +++||+
T Consensus        77 a~~~g~~~p~v~v~~~----~~~NAfa~G~~~~~~~Ivvt~gLl~~----------------------------l~~~El  124 (283)
T PRK03001         77 AQRAGLPMPKVYLINE----DQPNAFATGRNPEHAAVAATTGILRV----------------------------LSEREI  124 (283)
T ss_pred             HHHcCCCCCeEEEecC----CCcceEEecCCCCCeEEEecHHHHhh----------------------------CCHHHH
Confidence            9999999999999995    68999999998765 79999999998                            999999


Q ss_pred             hhcccC
Q psy7467         290 LAVLAH  295 (295)
Q Consensus       290 lAVLAH  295 (295)
                      .|||||
T Consensus       125 ~aVlAH  130 (283)
T PRK03001        125 RGVMAH  130 (283)
T ss_pred             HHHHHH
Confidence            999999

>PRK03982 heat shock protein HtpX; Provisional

Probab=99.89  E-value=1.1e-22  Score=190.71  Aligned_cols=127  Identities=19%  Similarity=0.245  Sum_probs=112.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhhhhHhhhhCCCccCC---CchHHHHHHH
Q psy7467         133 VKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLP---DGELKSRIEQ  209 (295)
Q Consensus       133 l~D~lK~~lL~~vl~~pl~~~~~~ii~~~G~~~wl~~w~~~~~~~l~l~~iyP~lI~PLFnkftPLe---dgeLr~~Ie~  209 (295)
                      ++|.+|++++.++++++++++++.+   .|..||+++|++.+++.++ .+++|..|+|++++++|++   +++|++.+++
T Consensus         1 ~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~l~~~~~p~L~~~v~~   76 (288)
T PRK03982          1 MMNQLKTGLLMALLTGLLYAIGYLL---GGSIGPIIAILLALIPNLI-SYYYSDKIVLASYNARIVSEEEAPELYRIVER   76 (288)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHH---hchhHHHHHHHHHHHHHHH-HHHHhHHHHHHhcCCEECChhhhHHHHHHHHH
Confidence            3688999999998888888777633   4788999999998888877 8899999999999999994   4569999999


Q ss_pred             HHHhCCCCCCcEEEEeCCCCCCCccEEEecCCCCc-EEEEehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhh
Q psy7467         210 LSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNK-RIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEE  288 (295)
Q Consensus       210 La~r~GFp~~~I~V~d~SkrS~hsNAyf~G~g~~K-rIVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~E  288 (295)
                      +|+++|+|.++||++|+    +++|||++|+++++ .|+++|+|++.                            +++||
T Consensus        77 la~~~g~~~p~v~v~~~----~~~NAfa~G~~~~~~~V~vt~gLl~~----------------------------l~~~E  124 (288)
T PRK03982         77 LAERANIPKPKVAIVPT----QTPNAFATGRDPKHAVVAVTEGILNL----------------------------LNEDE  124 (288)
T ss_pred             HHHHcCCCCCeEEEEeC----CCcceEEeccCCCCeEEEeehHHHhh----------------------------CCHHH
Confidence            99999999999999994    57999999998755 56699999998                            99999


Q ss_pred             hhhcccC
Q psy7467         289 VLAVLAH  295 (295)
Q Consensus       289 IlAVLAH  295 (295)
                      +.|||||
T Consensus       125 l~AVlAH  131 (288)
T PRK03982        125 LEGVIAH  131 (288)
T ss_pred             HHHHHHH
Confidence            9999999

>PRK01265 heat shock protein HtpX; Provisional

Probab=99.82  E-value=2.1e-19  Score=171.85  Aligned_cols=94  Identities=26%  Similarity=0.394  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHhhhhHhhhhC--CCccCC--CchHHHHHHHHHHhCCCCCCcEEEEeCCCCCCCccEEEecCC-CCc
Q psy7467         170 WVFIILMSLFLMTIYPEFIAPLFD--KYTPLP--DGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFF-KNK  244 (295)
Q Consensus       170 w~~~~~~~l~l~~iyP~lI~PLFn--kftPLe--dgeLr~~Ie~La~r~GFp~~~I~V~d~SkrS~hsNAyf~G~g-~~K  244 (295)
                      .++.+++.++.++++|.++.|+||  +++|.+  +++|++.++++|+++|+|.++||++|++    ++|||++|.+ ++|
T Consensus        48 ~~~~~~~~~~~~~~sp~li~~~~~a~~~~p~~~~~~~L~~~v~~la~~~g~~~p~vyv~~~~----~~NAfa~G~~~~~~  123 (324)
T PRK01265         48 LIFVFFLNIIQWLFGPYMINAAYRTVEVTPTDPVYGWLYSIVAEVAKYNGIRVPKVYIADVP----FPNAFAYGSPIAGK  123 (324)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHcCCeeCCCCCcccHHHHHHHHHHHHHcCCCCCeEEEecCC----CCCeEEeccCCCCC
Confidence            455677788889999999999997  899998  7899999999999999999999999964    5999999996 579


Q ss_pred             EEEEehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhhhhhcccC
Q psy7467         245 RIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH  295 (295)
Q Consensus       245 rIVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~EIlAVLAH  295 (295)
                      |||++|+|++.                            +++||+.||+||
T Consensus       124 ~Ivvt~gLl~~----------------------------l~~~El~aVlAH  146 (324)
T PRK01265        124 RIAITLPLLKI----------------------------LNRDEIKAVAGH  146 (324)
T ss_pred             EEEEehHHHhh----------------------------CCHHHHHHHHHH
Confidence            99999999998                            999999999999

>PRK01345 heat shock protein HtpX; Provisional

Probab=99.74  E-value=1.8e-17  Score=158.20  Aligned_cols=125  Identities=20%  Similarity=0.270  Sum_probs=100.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhhhhHhhhhCC--CccCCCchHHHHHHHHHHh
Q psy7467         136 QIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDK--YTPLPDGELKSRIEQLSAS  213 (295)
Q Consensus       136 ~lK~~lL~~vl~~pl~~~~~~ii~~~G~~~wl~~w~~~~~~~l~l~~iyP~lI~PLFnk--ftPLedgeLr~~Ie~La~r  213 (295)
                      .++.+++..++.+.++.+.+.+-   |....+.+.++.+++.++..+..|.++.|.++.  .+|.++++|++.+++||++
T Consensus         3 ~~~t~~~~~~~~~~~~~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~~~~p~L~~~v~~La~~   79 (317)
T PRK01345          3 YFRTAMLLAGMTALFMGVGYLIG---GAGGMMIALVIAAGMNLFSYWNSDKMVLRMYGAQEVDERSAPELYRMVRDLARR   79 (317)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHhHHHHHHHcCCeECCcccCHHHHHHHHHHHHH
Confidence            45555555555544444433332   333345556777888889999999999999985  7788889999999999999


Q ss_pred             CCCCCCcEEEEeCCCCCCCccEEEecCCC-CcEEEEehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhhhhhc
Q psy7467         214 VKFPLKKLYVVEGSKRSEHSNAYFYGFFK-NKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAV  292 (295)
Q Consensus       214 ~GFp~~~I~V~d~SkrS~hsNAyf~G~g~-~KrIVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~EIlAV  292 (295)
                      +|+|.++||++|    +.++|||++|.++ +++|+++|+|++.                            +++|||.||
T Consensus        80 agi~~p~v~vid----~~~~NAFa~G~~~~~~~V~vt~gLL~~----------------------------L~~dEL~aV  127 (317)
T PRK01345         80 AGLPMPKVYIID----NPQPNAFATGRNPENAAVAATTGLLQR----------------------------LSPEEVAGV  127 (317)
T ss_pred             cCCCCCcEEEEc----CCCcceEEecCCCCCeEEEechHHHhh----------------------------CCHHHHHHH
Confidence            999999999999    4789999999975 5689999999998                            999999999


Q ss_pred             ccC
Q psy7467         293 LAH  295 (295)
Q Consensus       293 LAH  295 (295)
                      |||
T Consensus       128 lAH  130 (317)
T PRK01345        128 MAH  130 (317)
T ss_pred             HHH
Confidence            999

>PRK04897 heat shock protein HtpX; Provisional

Probab=99.72  E-value=1e-16  Score=151.60  Aligned_cols=130  Identities=14%  Similarity=0.238  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHh---cChhHHHHHHHHHHHHHHHHHHHhhhhHhhhhCCCccC---CCchHHHH
Q psy7467         133 VKDQIKSFIVSLILSIPLTGAVVYIIQV---GGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPL---PDGELKSR  206 (295)
Q Consensus       133 l~D~lK~~lL~~vl~~pl~~~~~~ii~~---~G~~~wl~~w~~~~~~~l~l~~iyP~lI~PLFnkftPL---edgeLr~~  206 (295)
                      ..+.+|+.++..++.+.+..+.+.+-..   .+....+++.++.+++.++ .+.++..+...+++++|+   ++++|++.
T Consensus         7 ~~n~~~t~~ll~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~v~~~~~p~L~~~   85 (298)
T PRK04897          7 ASNKRKTVFLLVVFFLLLALVGAAVGYLFLNSGLGGLIIALIIGVIYALI-MIFQSTNVVMSMNHAREVTEEEAPELWHI   85 (298)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHH-HHHhhHHHHHHhCCCEECChhhhHHHHHH
Confidence            3466777777666655555544322110   0122334444444555444 455555666688889999   45789999


Q ss_pred             HHHHHHhCCCCCCcEEEEeCCCCCCCccEEEecCCCCcE-EEEehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCC
Q psy7467         207 IEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKR-IVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCD  285 (295)
Q Consensus       207 Ie~La~r~GFp~~~I~V~d~SkrS~hsNAyf~G~g~~Kr-IVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~  285 (295)
                      |+++|+++|+|.++||++|+    .++|||++|++++|+ |+++|+|++.                            ++
T Consensus        86 v~~la~~~gip~p~v~v~~~----~~~NAfa~G~~~~~~~v~vt~gLl~~----------------------------l~  133 (298)
T PRK04897         86 VEDMAMVAQIPMPRVFIIDD----PSPNAFATGSSPKNAAVAVTTGLLAI----------------------------MN  133 (298)
T ss_pred             HHHHHHHcCCCCCcEEEecC----CCCceEEeccCCCCcEEEeehHHHhh----------------------------CC
Confidence            99999999999999999994    579999999987665 7788899998                            99


Q ss_pred             hhhhhhcccC
Q psy7467         286 TEEVLAVLAH  295 (295)
Q Consensus       286 ~~EIlAVLAH  295 (295)
                      +||+.||+||
T Consensus       134 ~~El~aVlAH  143 (298)
T PRK04897        134 REELEGVIGH  143 (298)
T ss_pred             HHHHHHHHHH
Confidence            9999999999

>PRK02391 heat shock protein HtpX; Provisional

Probab=99.72  E-value=9.7e-17  Score=151.80  Aligned_cols=98  Identities=21%  Similarity=0.220  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHhhhhC--CCccCCCchHHHHHHHHHHhCCCCCCcEEEEeCCCCCCCccEEEecCCCC
Q psy7467         166 FLYLWVFIILMSLFLMTIYPEFIAPLFD--KYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKN  243 (295)
Q Consensus       166 wl~~w~~~~~~~l~l~~iyP~lI~PLFn--kftPLedgeLr~~Ie~La~r~GFp~~~I~V~d~SkrS~hsNAyf~G~g~~  243 (295)
                      ++++.++.+++.++..+..|.++....+  +.+|.++++|++.++++|++.|+|.++||++|    ++++|||++|++++
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~~v~~la~~~~~~~p~v~v~~----~~~~NAfa~G~~~~  114 (296)
T PRK02391         39 LVLIVVIAGGFLLAQYFFSDKLALWSMGARIVSEDEYPELHAMVERLCALADLPKPRVAVAD----SDVPNAFATGRSPK  114 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcCCEECChhhCHHHHHHHHHHHHHcCCCCCcEEEEe----CCCCceEEecCCCC
Confidence            4445566677777777778887776654  67778889999999999999999999999999    57999999999866


Q ss_pred             cE-EEEehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhhhhhcccC
Q psy7467         244 KR-IVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH  295 (295)
Q Consensus       244 Kr-IVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~EIlAVLAH  295 (295)
                      ++ |+++|+|++.                            +++||+.||+||
T Consensus       115 ~~~V~vt~gLl~~----------------------------L~~~El~aVlaH  139 (296)
T PRK02391        115 NAVVCVTTGLMRR----------------------------LDPDELEAVLAH  139 (296)
T ss_pred             CcEEEecHHHHhh----------------------------CCHHHHHHHHHH
Confidence            55 6678999998                            999999999999

>PRK03072 heat shock protein HtpX; Provisional

Probab=99.71  E-value=9.4e-17  Score=151.20  Aligned_cols=126  Identities=13%  Similarity=0.170  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhhhhHhhhhC--CCccCCCchHHHHHHHHH
Q psy7467         134 KDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFD--KYTPLPDGELKSRIEQLS  211 (295)
Q Consensus       134 ~D~lK~~lL~~vl~~pl~~~~~~ii~~~G~~~wl~~w~~~~~~~l~l~~iyP~lI~PLFn--kftPLedgeLr~~Ie~La  211 (295)
                      .+.++++++..++.+.++.+.+.+    |....+++.++.+++.++..+..|..+....+  .-+|.++++|++.++++|
T Consensus         5 ~~~~~t~~l~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~~~p~L~~~v~~la   80 (288)
T PRK03072          5 ANGLKTALLLGGMSALIVFIGALF----GRTGLGIAVLIAVGMNAYVYWNSDKLALRAMHAQPVSEVQAPAMYRIVRELS   80 (288)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhHHHHHHhcCCEECChhhhHHHHHHHHHHH
Confidence            356777777776666666555444    44555666677777777777777877776664  345667789999999999


Q ss_pred             HhCCCCCCcEEEEeCCCCCCCccEEEecCCCC-cEEEEehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhhhh
Q psy7467         212 ASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKN-KRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVL  290 (295)
Q Consensus       212 ~r~GFp~~~I~V~d~SkrS~hsNAyf~G~g~~-KrIVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~EIl  290 (295)
                      +++|+|.++||++|    ++++|||++|..+. ..|+++|+|++.                            +++||+.
T Consensus        81 ~~~g~p~p~vyv~~----~~~~NAFa~G~~~~~~~v~vt~gLl~~----------------------------l~~~El~  128 (288)
T PRK03072         81 TAARQPMPRLYISP----TAAPNAFATGRNPRNAAVCCTEGILQI----------------------------LNERELR  128 (288)
T ss_pred             HHcCCCCCCEEEec----CCCCceEEecCCCCCcEEEecHHHHHh----------------------------CCHHHHH
Confidence            99999999999999    45799999997543 458899999998                            9999999


Q ss_pred             hcccC
Q psy7467         291 AVLAH  295 (295)
Q Consensus       291 AVLAH  295 (295)
                      ||+||
T Consensus       129 aVlAH  133 (288)
T PRK03072        129 GVLGH  133 (288)
T ss_pred             HHHHH
Confidence            99999

>PRK02870 heat shock protein HtpX; Provisional

Probab=99.70  E-value=2.2e-16  Score=151.85  Aligned_cols=131  Identities=16%  Similarity=0.240  Sum_probs=99.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------------------hhHHHHHHHHHHHHHHHHHHHhhhhHhh
Q psy7467         133 VKDQIKSFIVSLILSIPLTGAVVYIIQVGG----------------------NMVFLYLWVFIILMSLFLMTIYPEFIAP  190 (295)
Q Consensus       133 l~D~lK~~lL~~vl~~pl~~~~~~ii~~~G----------------------~~~wl~~w~~~~~~~l~l~~iyP~lI~P  190 (295)
                      -++.+|+.++..++.+.++.+.+.+-...|                      +..-+++.++.+++.++..+..+.++..
T Consensus        18 ~~n~~kt~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~l~   97 (336)
T PRK02870         18 RRNRLKTRAVIATYLAIFLFIGLLVDAIRIASEYPAASLGKALLALLTFQIFPTATLIMSLVAVISILVTFQNFDKIMLS   97 (336)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhhhhhhhccccchHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            346788888887777777666655532222                      2333444455566666666666665554


Q ss_pred             hh-------CCCccCCCchHHHHHHHHHHhCCCC-CCcEEEEeCCCCCCCccEEEecCCC-CcEEEEehhhhhhhcCCCc
Q psy7467         191 LF-------DKYTPLPDGELKSRIEQLSASVKFP-LKKLYVVEGSKRSEHSNAYFYGFFK-NKRIVLFDTLLKDYVPLNA  261 (295)
Q Consensus       191 LF-------nkftPLedgeLr~~Ie~La~r~GFp-~~~I~V~d~SkrS~hsNAyf~G~g~-~KrIVL~DTLL~~~~~~~~  261 (295)
                      ..       +++.|+++++|++.++++|+++|+| .++||++|+    +++|||++|+++ +++|+++|+|++.      
T Consensus        98 ~~~a~~I~~~~~~p~~~~~L~~~ve~La~~ag~p~~p~V~vi~~----~~~NAFA~G~~~~~~~Ivvt~GLL~~------  167 (336)
T PRK02870         98 GTEYKEITPENALSLQERQLYNVVEELLVAAGLRFMPKVYIIDA----PYMNAFASGYSEKSAMVAITTGLLEK------  167 (336)
T ss_pred             HcCCEEcCCCCCCchhhHHHHHHHHHHHHHcCCCCCCeEEEEcC----CCCceEEecCCCCCcEEEEehHHhhh------
Confidence            43       3566777789999999999999999 899999995    579999999975 7999999999998      


Q ss_pred             ccCCCCCCCCcccccccccCCCCChhhhhhcccC
Q psy7467         262 DKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH  295 (295)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~gl~~~EIlAVLAH  295 (295)
                                            +++||+.||+||
T Consensus       168 ----------------------L~~dEL~aVlAH  179 (336)
T PRK02870        168 ----------------------LDRDELQAVMAH  179 (336)
T ss_pred             ----------------------CCHHHHHHHHHH
Confidence                                  999999999999

>PRK05457 heat shock protein HtpX; Provisional

Probab=99.58  E-value=2.8e-14  Score=134.32  Aligned_cols=93  Identities=23%  Similarity=0.219  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHHHHhhhhHhhhhCCCccC----CCch--HHHHHHHHHHhCCCCCCcEEEEeCCCCCCCccEEEecCCCC
Q psy7467         170 WVFIILMSLFLMTIYPEFIAPLFDKYTPL----PDGE--LKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKN  243 (295)
Q Consensus       170 w~~~~~~~l~l~~iyP~lI~PLFnkftPL----edge--Lr~~Ie~La~r~GFp~~~I~V~d~SkrS~hsNAyf~G~g~~  243 (295)
                      .++.++..++..++.|.++...++ .+|+    ++++  |++.++++|+++|+|.+++|++|    +.++|||++|.+++
T Consensus        41 ~~~~~~~~~~~~~~~~~i~~~~~~-a~~i~~~~~~~~~~L~~~v~~la~~~g~p~p~v~v~~----~~~~NAfa~G~~~~  115 (284)
T PRK05457         41 AVFGFGGSFISLLMSKWMAKRSTG-AEVIEQPRNETERWLVETVARQARQAGIGMPEVAIYH----SPEINAFATGASKN  115 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC-CeECCCCCCchHHHHHHHHHHHHHhCCCCCCCEEEEe----CCCceEEEecCCCC
Confidence            344555566666777776665554 5555    2333  99999999999999999999999    47899999999887


Q ss_pred             cEEE-EehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhhhhhcccC
Q psy7467         244 KRIV-LFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH  295 (295)
Q Consensus       244 KrIV-L~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~EIlAVLAH  295 (295)
                      |++| +++.|++.                            +++||+.||+||
T Consensus       116 ~~~V~vt~gLl~~----------------------------L~~~El~aVlAH  140 (284)
T PRK05457        116 NSLVAVSTGLLQN----------------------------MSRDEVEAVLAH  140 (284)
T ss_pred             CeEEEeehHHhhh----------------------------CCHHHHHHHHHH
Confidence            7755 55559998                            999999999999

>PF01435 Peptidase_M48: Peptidase family M48 This is family M48 in the peptidase classification

Probab=99.50  E-value=4.1e-15  Score=131.69  Aligned_cols=91  Identities=41%  Similarity=0.653  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHhhhhHhhhhCCCccCCCchHHHHHHHHHHhC--CCCCCcEEEEeCCCCCCCccEEEecCCCCcEEEEeh
Q psy7467         173 IILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASV--KFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFD  250 (295)
Q Consensus       173 ~~~~~l~l~~iyP~lI~PLFnkftPLedgeLr~~Ie~La~r~--GFp~~~I~V~d~SkrS~hsNAyf~G~g~~KrIVL~D  250 (295)
                      .+++..++..++|.+++|++++++|.++++|++.++++++++  |+|.++||++|.+.    .|||++|.++.|+|++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~L~~~v~~l~~~~~~~~~~~~v~v~~~~~----~NA~~~g~~~~~~I~v~~   78 (226)
T PF01435_consen    3 MLVVSLLLAFIGPPLIAPLFNKFTPLEDPELRRIVEELARRAGLGIPPPRVYVIDSPS----PNAFATGGGPRKRIVVTS   78 (226)
T ss_dssp             --TTTSTTGHHCCCCHCCHCTC--B-HHHHHHHHHHHHHHHHHCTSS--EEEEE--SS----EEEEEETTTC--EEEEEH
T ss_pred             eeeHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHhcCCCCCCeEEEEcCCC----CcEEEEccCCCcEEEEeC
Confidence            344556667889999999999999999999999999999999  99999999999543    999999999999999999


Q ss_pred             hhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhhhhhcccC
Q psy7467         251 TLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH  295 (295)
Q Consensus       251 TLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~EIlAVLAH  295 (295)
                      +|++.                            ++++|+.|||||
T Consensus        79 ~ll~~----------------------------~~~~el~aVlaH   95 (226)
T PF01435_consen   79 GLLES----------------------------LSEDELAAVLAH   95 (226)
T ss_dssp             HHHHH----------------------------SSHHHHHHHHHH
T ss_pred             hhhhc----------------------------ccHHHHHHHHHH
Confidence            99987                            899999999999

; InterPro: IPR001915 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M48 (Ste24 endopeptidase family, clan M-); members of both subfamily are represented. The members of this set of proteins are mostly described as probable protease htpX homologue (3.4.24 from EC) or CAAX prenyl protease 1, which proteolytically removes the C-terminal three residues of farnesylated proteins. They are integral membrane proteins associated with the endoplasmic reticulum and Golgi, binding one zinc ion per subunit. In Saccharomyces cerevisiae (Baker's yeast) Ste24p is required for the first NH2-terminal proteolytic processing event within the a-factor precursor, which takes place after COOH-terminal CAAX modification is complete. The Ste24p contains multiple predicted membrane spans, a zinc metalloprotease motif (HEXXH), and a COOH-terminal ER retrieval signal (KKXX). The HEXXH protease motif is critical for Ste24p activity, since Ste24p fails to function when conserved residues within this motif are mutated. The Ste24p homologues occur in a diverse group of organisms, including Escherichia coli, Schizosaccharomyces pombe (Fission yeast), Haemophilus influenzae, and Homo sapiens (Human), which indicates that the gene is highly conserved throughout evolution. Ste24p and the proteins related to it define a subfamily of proteins that are likely to function as intracellular, membrane-associated zinc metalloproteases []. HtpX is a zinc-dependent endoprotease member of the membrane-localized proteolytic system in E. coli, which participates in the proteolytic quality control of membrane proteins in conjunction with FtsH, a membrane-bound and ATP-dependent protease. Biochemical characterisation revealed that HtpX undergoes self-degradation upon cell disruption or membrane solubilization. It can also degraded casein and cleaves solubilized membrane proteins, for example, SecY []. Expression of HtpX in the plasma membrane is under the control of CpxR, with the metalloproteinase active site of HtpX located on the cytosolic side of the membrane. This suggests a potential role for HtpX in the response to mis-folded proteins [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis, 0016020 membrane; PDB: 3CQB_A 3C37_B.

>COG0501 HtpX Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones]

Probab=99.05  E-value=4.8e-09  Score=97.30  Aligned_cols=96  Identities=22%  Similarity=0.308  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhhHhhhhCC--CccCC------CchHHHHHHHHHHhCCCC-CCcEEEEeCCCCCCCccEEEe
Q psy7467         168 YLWVFIILMSLFLMTIYPEFIAPLFDK--YTPLP------DGELKSRIEQLSASVKFP-LKKLYVVEGSKRSEHSNAYFY  238 (295)
Q Consensus       168 ~~w~~~~~~~l~l~~iyP~lI~PLFnk--ftPLe------dgeLr~~Ie~La~r~GFp-~~~I~V~d~SkrS~hsNAyf~  238 (295)
                      ..+++.+...++..+..+.++.-..+.  ..+..      ...+..++++++.+.|.| .++++++|    +..+|||.+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~~~v~i~~----~~~~NAFa~  133 (302)
T COG0501          58 IALLLAFAALLISLLFSKALVLKSLGALTLSEPILLAPRLYAVLLLKVAELARQAGIPHMPEVYILE----TPQPNAFAL  133 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhceeecccccccchHHHHHHHHHHHHHHHHCCCCCCCeeEEec----CCCccceec
Confidence            345555666666667777666655543  22211      124555899999999999 89999999    789999999


Q ss_pred             cCC-CCcEEEEehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhhhhhcccC
Q psy7467         239 GFF-KNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH  295 (295)
Q Consensus       239 G~g-~~KrIVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~EIlAVLAH  295 (295)
                      |.+ ++++||+||+|++.                            +++|||.|||||
T Consensus       134 g~~~~~~~V~vt~gLl~~----------------------------l~~dEl~aVlaH  163 (302)
T COG0501         134 GGGPKNGRVVVTTGLLDL----------------------------LNDDELEAVLAH  163 (302)
T ss_pred             CCCCCCeeEEecHHHHhh----------------------------CCHHHHHHHHHH
Confidence            986 77999999999998                            999999999999

>PF05569 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR008756 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.83  E-value=0.0053  Score=57.66  Aligned_cols=71  Identities=31%  Similarity=0.514  Sum_probs=58.5

Q ss_pred             hhCCCccCCCchHHHHHHHHHHhCCCCC-CcEEEEeCCCCCCCccEEEecCCCCcEEEEehhhhhhhcCCCcccCCCCCC
Q psy7467         191 LFDKYTPLPDGELKSRIEQLSASVKFPL-KKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGD  269 (295)
Q Consensus       191 LFnkftPLedgeLr~~Ie~La~r~GFp~-~~I~V~d~SkrS~hsNAyf~G~g~~KrIVL~DTLL~~~~~~~~~~~~~~~~  269 (295)
                      +..+.+|.+|+++.+.+++.+++.|++- -+|++-+     .-...+.+|+.+ .+|++-+.+.++              
T Consensus       131 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~s~-----~i~sP~~~G~~~-p~I~lP~~~~~~--------------  190 (299)
T PF05569_consen  131 LLRKARPVEDEELQALLEECKEELGIKRPIRIRVSS-----GISSPFVFGFLR-PVIVLPESLLED--------------  190 (299)
T ss_pred             HHHhccccCcHHHHHHHHHHHHHhCCCCceEEEEcC-----CCCCCeeecCcc-eEEEecCccccc--------------
Confidence            5677899999999999999999999773 3444433     445678899865 789999999987              


Q ss_pred             CCcccccccccCCCCChhhhhhcccC
Q psy7467         270 SEPLISTEGANKKGCDTEEVLAVLAH  295 (295)
Q Consensus       270 ~~~~~~~~~~~~~gl~~~EIlAVLAH  295 (295)
                                    ++++|+.+||+|
T Consensus       191 --------------~~~~el~~il~H  202 (299)
T PF05569_consen  191 --------------LSEEELRAILLH  202 (299)
T ss_pred             --------------cCHHHHHHHHHH
Confidence                          899999999999

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M56 (clan M-). The predicted active site residues for members of this family occur in the motif HEXXH. The type example is BlaR1 peptidase from Bacillus licheniformis. Production of beta-Lactamase and penicillin-binding protein 2a (which mediate staphylococcal resistance to beta-lactam antibiotics) is regulated by a signal-transducing integral membrane protein and a transcriptional repressor. The signal transducer is a fusion protein with penicillin-binding and zinc metalloprotease domains. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription.

>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only]

Probab=95.05  E-value=0.051  Score=55.05  Aligned_cols=84  Identities=19%  Similarity=0.237  Sum_probs=59.0

Q ss_pred             HHHHHHHhhhhHhhhh-CCCccCCCchHHHHHHHHHH----hCCCCCC--cEEEEeCCCCCCCccEEEe-cCCCCcEEEE
Q psy7467         177 SLFLMTIYPEFIAPLF-DKYTPLPDGELKSRIEQLSA----SVKFPLK--KLYVVEGSKRSEHSNAYFY-GFFKNKRIVL  248 (295)
Q Consensus       177 ~l~l~~iyP~lI~PLF-nkftPLedgeLr~~Ie~La~----r~GFp~~--~I~V~d~SkrS~hsNAyf~-G~g~~KrIVL  248 (295)
                      +.-.-+-++....+-- +....++|.+|.+-|.++..    .+|-+..  .+++|+    +..-|||.+ |    .+|+|
T Consensus        45 s~~qev~~g~~~~~Qlr~~~~~i~D~el~~yv~~~g~rL~~~a~~~~~~f~f~lV~----d~~iNAFA~~G----g~v~v  116 (484)
T COG4783          45 SPAQEVALGDPANAQLRGSVPLIRDPELEEYVNSLGQRLAAAADLVKTPFTFFLVN----DDSINAFATPG----GYVVV  116 (484)
T ss_pred             CHHHHHHhhHHHHHHhccCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCeEEEEec----CCccchhhcCC----ceEEE
Confidence            3333455555554444 33344589998888877655    4566533  467777    678999999 7    58999


Q ss_pred             ehhhhhhhcCCCcccCCCCCCCCcccccccccCCCCChhhhhhcccC
Q psy7467         249 FDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH  295 (295)
Q Consensus       249 ~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~EIlAVLAH  295 (295)
                      .-+|+..-                           =+++|+.+||||
T Consensus       117 ntGLll~a---------------------------e~esElagViAH  136 (484)
T COG4783         117 NTGLLLTA---------------------------ENESELAGVIAH  136 (484)
T ss_pred             ehHHHHhc---------------------------CCHHHHHHHHHH
Confidence            99999871                           278899999999

>KOG2661|consensus

Probab=83.65  E-value=0.9  Score=44.65  Aligned_cols=40  Identities=28%  Similarity=0.507  Sum_probs=33.0

Q ss_pred             EEEEeCCCCCCCccEEEecCCCCcEEEEehhhhhhhcCCCcccCCCCCCCCcccccccccCCCC-ChhhhhhcccC
Q psy7467         221 LYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGANKKGC-DTEEVLAVLAH  295 (295)
Q Consensus       221 I~V~d~SkrS~hsNAyf~G~g~~KrIVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl-~~~EIlAVLAH  295 (295)
                      |.|+|    +..+|||+--=|   +|++|.++|..                            | +++|+.+||||
T Consensus       241 ihVVn----dPipNAFvLPgG---KvfVFtgiLn~----------------------------ck~ddglAtvLgH  281 (424)
T KOG2661|consen  241 IHVVN----DPIPNAFVLPGG---KVFVFTGILNS----------------------------CKDDDGLATVLGH  281 (424)
T ss_pred             EEEec----CCCCceeeccCC---eEEEEechhhc----------------------------ccChHHHHHHHHH
Confidence            78888    466999987433   59999999987                            6 56799999999

>COG4219 MecR1 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component [Transcription / Signal transduction mechanisms]

Probab=80.48  E-value=9.1  Score=37.47  Aligned_cols=62  Identities=19%  Similarity=0.267  Sum_probs=44.8

Q ss_pred             CchHHHHHHHHHHhCCCCCCcEEEEeCCCCCCCccEEEecCCCCcEEEEehhhhhhhcCCCcccCCCCCCCCcccccccc
Q psy7467         200 DGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSGDSEPLISTEGA  279 (295)
Q Consensus       200 dgeLr~~Ie~La~r~GFp~~~I~V~d~SkrS~hsNAyf~G~g~~KrIVL~DTLL~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (295)
                      +.|.++.++++.++..-  ++ -++.+|++  -.|=-++|..+ -+||+-+.+.++                        
T Consensus       135 e~d~~~~~~~~~~~~~~--k~-i~ir~s~~--i~~P~v~gl~k-p~IvlP~d~~~r------------------------  184 (337)
T COG4219         135 EVDKRKIVTILKNHQYK--KH-ILIRKSKA--IDGPMVFGLVK-PCIVLPADFVER------------------------  184 (337)
T ss_pred             cccHHHHHHHHHHhhhc--cC-eeEeeccc--CCCceeeccCc-ceEEccHHHHhh------------------------
Confidence            34677777777666543  34 34555554  44455678766 589999999998                        


Q ss_pred             cCCCCChhhhhhcccC
Q psy7467         280 NKKGCDTEEVLAVLAH  295 (295)
Q Consensus       280 ~~~gl~~~EIlAVLAH  295 (295)
                          ++++|+.-|++|
T Consensus       185 ----~~~ee~~yIilH  196 (337)
T COG4219         185 ----LTDEELKYIILH  196 (337)
T ss_pred             ----cCHHhhhhhHhH
Confidence                899999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	295
4aw6_A	482	Crystal Structure Of The Human Nuclear Membrane Zin		3e-52
2ypt_A	482	Crystal Structure Of The Human Nuclear Membrane Zin		3e-52
4il3_A	461	Crystal Structure Of S. Mikatae Ste24p Length = 461		3e-26

>pdb|4AW6|A Chain A, Crystal Structure Of The Human Nuclear Membrane Zinc Metalloprotease Zmpste24 (Face1) Length = 482

Iteration: 1
 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 96/179 (53%), Positives = 132/179 (73%), Gaps = 9/179 (5%)
Query: 126 NTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYP 185
             T GFF+KD IK F+V+  + +P++  ++YII++GG+  F+Y W+F +++SL L+TIY 
Sbjct: 157 QQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYA 216
Query: 186 EFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKR 245
           ++IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKR
Sbjct: 217 DYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKR 276
Query: 246 IVLFDTLLKDYVPLNAD---------KKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH 295
           IVLFDTLL++Y  LN D         + ++ G+SE + +     K+GC  EEVLAVL H
Sbjct: 277 IVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGCKNEEVLAVLGH 335

>pdb|2YPT|A Chain A, Crystal Structure Of The Human Nuclear Membrane Zinc Metalloprotease Zmpste24 Mutant (E336a) In Complex With A Synthetic Csim Tetrapeptide From The C-Terminus Of Prelamin A Length = 482

Iteration: 1
 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 96/179 (53%), Positives = 132/179 (73%), Gaps = 9/179 (5%)
Query: 126 NTTYGFFVKDQIKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYP 185
             T GFF+KD IK F+V+  + +P++  ++YII++GG+  F+Y W+F +++SL L+TIY 
Sbjct: 157 QQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYA 216
Query: 186 EFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKNKR 245
           ++IAPLFDK+TPLP+G+LK  IE ++ S+ FPL K+YVVEGSKRS HSNAYFYGFFKNKR
Sbjct: 217 DYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKR 276
Query: 246 IVLFDTLLKDYVPLNAD---------KKDKSGDSEPLISTEGANKKGCDTEEVLAVLAH 295
           IVLFDTLL++Y  LN D         + ++ G+SE + +     K+GC  EEVLAVL H
Sbjct: 277 IVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGCKNEEVLAVLGH 335

>pdb|4IL3|A Chain A, Crystal Structure Of S. Mikatae Ste24p Length = 461

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 128/267 (47%), Gaps = 73/267 (27%)
Query: 60  IIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKE 119
           I  FS   F FE YL+ RQ +   ET + P  +   +D E+F KSR YS  K  FS+F +
Sbjct: 19  ISAFSIAQFSFESYLTYRQYQKLSETKL-PPVLEDEIDDETFHKSRNYSRAKAKFSIFSD 77
Query: 120 T---VSNVMNTTYGFFVK-----------------------DQIKSFI-----VSLILSI 148
                  ++   Y FF K                        Q   F+     +S ++ +
Sbjct: 78  IYNLAQKLVFIKYDFFPKIWHMAVTLSNAVLPVRFHMVSTVAQSLCFLGLLSSMSTLVDL 137
Query: 149 PLTGAVVYIIQ--------------------------VGGNMVFL-----------YLW- 170
           PL+    ++++                          +GG +++L           +LW 
Sbjct: 138 PLSYYSHFVLEEKFGFNKLTVKLWITDMIKSLTLAYAIGGPILYLFLKIFDKFPTDFLWY 197
Query: 171 --VFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLKKLYVVEGSK 228
             VF+ ++ +  MTI P FI PLF+K+TPL DGELK  IE L+  V FPL K++V++GSK
Sbjct: 198 IMVFLFVVQILAMTIIPVFIMPLFNKFTPLEDGELKKSIESLADRVGFPLDKIFVIDGSK 257
Query: 229 RSEHSNAYFYGF-FKNKRIVLFDTLLK 254
           RS HSNAYF G  F +KRIVLFDTL+ 
Sbjct: 258 RSSHSNAYFTGLPFTSKRIVLFDTLVN 284

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	295
4aw6_A	482	CAAX prenyl protease 1 homolog; hydrolase, M48 pep	1e-36

>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} Length = 482

 Score =  135 bits (340), Expect = 1e-36
 Identities = 119/330 (36%), Positives = 166/330 (50%), Gaps = 77/330 (23%)

Query: 43  AVNLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFE 102
           +++   E   E +IF  ++ FSW V+L+E +L+ RQRR+Y  TT VP ++   MD+E+FE
Sbjct: 6   SLDALWEMPAEKRIFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFE 65

Query: 103 KSRRYSLDKNVFSMFKETVSNVMN---TTYGFFVKDQIKS-------------------- 139
           KSR Y LDK+ FS +    S         +G        S                    
Sbjct: 66  KSRLYQLDKSTFSFWSGLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLV 125

Query: 140 -----FIVSLILSIPLTGAVVYIIQ--------------------------VGGNMVFLY 168
                 + S +  +P +    ++I+                          +   +  L 
Sbjct: 126 FLLLATLFSALAGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLL 185

Query: 169 LWVFIILMSLF--------------LMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASV 214
           L++  I    F              L+TIY ++IAPLFDK+TPLP+G+LK  IE ++ S+
Sbjct: 186 LYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSI 245

Query: 215 KFPLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKS------- 267
            FPL K+YVVEGSKRS HSNAYFYGFFKNKRIVLFDTLL++Y  LN D ++ S       
Sbjct: 246 DFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNE 305

Query: 268 --GDSEPLISTEGANKKGCDTEEVLAVLAH 295
             G+SE + +     K+GC  EEVLAVL H
Sbjct: 306 EEGNSEEIKAKVKNKKQGCKNEEVLAVLGH 335

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	295
4aw6_A	482	CAAX prenyl protease 1 homolog; hydrolase, M48 pep	100.0
3cqb_A	107	Probable protease HTPX homolog; heat shock protein	99.25
3c37_A	253	Peptidase, M48 family; Q74D82, GSR143A, structural	99.24

>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A

Probab=100.00  E-value=2.1e-64  Score=500.93  Aligned_cols=251  Identities=52%  Similarity=0.940  Sum_probs=218.4

Q ss_pred             HHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCCCCchhccCCCHHHHHHHHHHhHhhhhHHhHHHHHHHH
Q psy7467          45 NLKMEFTLEFQIFYGIIGFSWIVFLFEFYLSIRQRRVYHETTIVPHQIAHGMDAESFEKSRRYSLDKNVFSMFKETVSNV  124 (295)
Q Consensus        45 ~~~~~~~~p~~~~~~il~~~~~~~l~e~yL~~RQ~r~~~~~~~vP~~l~~~~s~e~f~Ks~~Y~~~k~~f~~~~~l~~~i  124 (295)
                      +.||++..+..++++++++++++++||.||++||+|+++++.++|+++++++|+|+|+|||+|++||.+|++++++++.+
T Consensus         8 ~~~~~~~~~~~~~~~il~~~~~~~~~e~yL~~RQ~~~~~~~~~vP~~l~~~~~~e~f~ka~~Y~~~k~~f~~~~~~~~~i   87 (482)
T 4aw6_A            8 DALWEMPAEKRIFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSET   87 (482)
T ss_dssp             CCCSSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678887888999999999999999999999999999988889999999999999999999999999999999999887


Q ss_pred             -------------------------------------------------------------------hc-CChHHHHHHH
Q psy7467         125 -------------------------------------------------------------------MN-TTYGFFVKDQ  136 (295)
Q Consensus       125 -------------------------------------------------------------------FN-~T~~~fl~D~  136 (295)
                                                                                         || ||++.|++|.
T Consensus        88 ~~~~~l~~g~~~~lw~~~~~~~~~~~~~~~~~i~~s~~f~~~~~l~~~l~~LP~~~Y~tfvle~~~Gfnk~t~~~f~~D~  167 (482)
T 4aw6_A           88 EGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPWSLYNTFVIEEKHGFNQQTLGFFMKDA  167 (482)
T ss_dssp             HHHHHHHHTHHHHHHHHTCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTCBCCCHHHHHHHH
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhHHHHHHheeehhhcCCCCCCHHHHHHHH
Confidence                                                                               88 9999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhhhhHhhhhCCCccCCCchHHHHHHHHHHhCCC
Q psy7467         137 IKSFIVSLILSIPLTGAVVYIIQVGGNMVFLYLWVFIILMSLFLMTIYPEFIAPLFDKYTPLPDGELKSRIEQLSASVKF  216 (295)
Q Consensus       137 lK~~lL~~vl~~pl~~~~~~ii~~~G~~~wl~~w~~~~~~~l~l~~iyP~lI~PLFnkftPLedgeLr~~Ie~La~r~GF  216 (295)
                      +|++++++++++|++++++++++++|++||+|+|++.++++++++++||.+|+|+||||+|+|||||+++|+++|+++||
T Consensus       168 ~k~~~l~~vi~~pl~~~~~~ii~~~g~~~wl~~w~~~~~~~l~~~~iyP~~I~PLfnk~~Pl~dg~L~~~Ie~la~~~~f  247 (482)
T 4aw6_A          168 IKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDF  247 (482)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHTHHHHSCEEECCSSHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCcHHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEeCCCCCCCccEEEecCCCCcEEEEehhhhhhhcCCCcccCCCCC-------CCCcc--cccccccCCCCChh
Q psy7467         217 PLKKLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVPLNADKKDKSG-------DSEPL--ISTEGANKKGCDTE  287 (295)
Q Consensus       217 p~~~I~V~d~SkrS~hsNAyf~G~g~~KrIVL~DTLL~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~gl~~~  287 (295)
                      |+++|||+||||||+|+||||+|++++||||++|||+++|++.+.++++.++       +++.+  +.+++|+|+||++|
T Consensus       248 p~~~v~vv~gSkRs~~~NAy~~G~~~~krIVl~dtLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  327 (482)
T 4aw6_A          248 PLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGCKNE  327 (482)
T ss_dssp             CEEEEEEECGGGTBSCCCEEEEESSSCEEEEEEHHHHC------------------------------------CCCCHH
T ss_pred             CCCcEEEEeCCCCCCCCceEEEcCCCCcEEEEEchHHHhcccccccccccccccccccccccchhhcccchhhccCCCHH
Confidence            9999999999999999999999999999999999999998776654443222       22222  33777999999999


Q ss_pred             hhhhcccC
Q psy7467         288 EVLAVLAH  295 (295)
Q Consensus       288 EIlAVLAH  295 (295)
                      |++||+||
T Consensus       328 El~aVlaH  335 (482)
T 4aw6_A          328 EVLAVLGH  335 (482)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999999

>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.25  E-value=5.4e-12  Score=101.39  Aligned_cols=72  Identities=17%  Similarity=0.171  Sum_probs=60.9

Q ss_pred             hCCCccCCC------chHHHHHHHHHHhCCCCCCcEEEEeCCCCCCCccEEEecCCCC-cEEEEehhhhhhhcCCCcccC
Q psy7467         192 FDKYTPLPD------GELKSRIEQLSASVKFPLKKLYVVEGSKRSEHSNAYFYGFFKN-KRIVLFDTLLKDYVPLNADKK  264 (295)
Q Consensus       192 FnkftPLed------geLr~~Ie~La~r~GFp~~~I~V~d~SkrS~hsNAyf~G~g~~-KrIVL~DTLL~~~~~~~~~~~  264 (295)
                      ..+.+|+++      ++|++.++++|++.|+|.+++|++|.    ..+|||++|.++. +.|++++.|++.         
T Consensus        11 ~~g~~~~~~~~~~~~~~L~~~~~~l~~~~~~~~~~v~v~~~----~~~NAf~~g~~~~~~~i~v~~gLl~~---------   77 (107)
T 3cqb_A           11 SVGGMVIESPRNETEHWLLETVGRQAQQAGIGMPTVAIYDS----ADINAFATGAKRDDSLVAVSTGLLHN---------   77 (107)
T ss_dssp             CCTTEECSSCSSHHHHHHHHHHHHHHHHHTCCCCEEEEECC----SSEEEEEECCC--CCEEEEEHHHHHH---------
T ss_pred             HcCCccCCCccchhHHHHHHHHHHHHHHcCCCCCeEEEEEC----CCcCEEEEecCCCCCEEEEcHHHHhh---------
Confidence            345777754      36999999999999999999999994    6799999999874 567788889998         


Q ss_pred             CCCCCCCcccccccccCCCCChhhhhhcccC
Q psy7467         265 DKSGDSEPLISTEGANKKGCDTEEVLAVLAH  295 (295)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~gl~~~EIlAVLAH  295 (295)
                                         ++++|+.|||||
T Consensus        78 -------------------l~~~El~aVlaH   89 (107)
T 3cqb_A           78 -------------------MTRDEAEAVLAH   89 (107)
T ss_dssp             -------------------SCHHHHHHHHHH
T ss_pred             -------------------CCHHHHHHHHHH
Confidence                               999999999999

>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}

Probab=99.24  E-value=5.7e-12  Score=114.86  Aligned_cols=76  Identities=22%  Similarity=0.339  Sum_probs=67.8

Q ss_pred             hhhHhhhhCCCccCCCchHHHHHHHHHHhCCCCCC------cEEEEeCCCCCCCccEEEecCCCCcEEEEehhhhhhhcC
Q psy7467         185 PEFIAPLFDKYTPLPDGELKSRIEQLSASVKFPLK------KLYVVEGSKRSEHSNAYFYGFFKNKRIVLFDTLLKDYVP  258 (295)
Q Consensus       185 P~lI~PLFnkftPLedgeLr~~Ie~La~r~GFp~~------~I~V~d~SkrS~hsNAyf~G~g~~KrIVL~DTLL~~~~~  258 (295)
                      .....+++++++|++|+++++.|++++++++++.+      ++||+|.    ..+|||++|-   .+||++|+||+.   
T Consensus        24 ~~~~~~~~~~~~~~~d~~l~~~l~~l~~~l~~~~~~~~~~~~v~v~~~----~~~NAfa~~g---g~I~v~~gLl~~---   93 (253)
T 3c37_A           24 NKFAVEIEKQQQPVNDPEVQRYVDKVGKRLLSGARAVEFDYVFKVVKD----DSVNAFAIPG---GRVYVHTGLLKA---   93 (253)
T ss_dssp             HHHHHHHHTTCCBCCCHHHHHHHHHHHHHHHHTSSCCCSCCEEEEECC----CSCCEEEETT---TEEEEEHHHHHH---
T ss_pred             HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeC----CCCCeeEcCC---CeEEeeHHHHhh---
Confidence            34567899999999999999999999999887765      8999994    5699999983   599999999998   


Q ss_pred             CCcccCCCCCCCCcccccccccCCCC-ChhhhhhcccC
Q psy7467         259 LNADKKDKSGDSEPLISTEGANKKGC-DTEEVLAVLAH  295 (295)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~gl-~~~EIlAVLAH  295 (295)
                                               + +++||.|||||
T Consensus        94 -------------------------l~~~~ELaaVLaH  106 (253)
T 3c37_A           94 -------------------------ADNETELAGVLAH  106 (253)
T ss_dssp             -------------------------CSSHHHHHHHHHH
T ss_pred             -------------------------CCCHHHHHHHHHH
Confidence                                     8 89999999999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00