Psyllid ID: psy7549

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100----
Protein Sequence
MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIKNPNIDRGLQTYKTPT
Secondary Structure (PSIPRED)
cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcEEEcHHHHHHHHHHHHHcccHcccccccHHHHHHHHHHHHHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
mrrqhagnyyepvpnqfdggdaihQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLlrgmdddfdrtggflnnsMARVVLDIEKiknpnidrglqtyktpt
Flexible Loop (DISEMBL)
mrrqhagnyyepvpnqfDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDiekiknpnidrglqtyktpt
Low Complexity Region (SEG)
MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIKNPNIDRGLQTYKTPT
Disordered region (IsUnstruct)
***********************************NKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIKN**************
Disordered Region (DISOPRED)
**************************************QALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR*****************QTYK***
Disordered Region (DISEMBL)
MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIKNPNIDRGLQTYKTPT
Disordered Region (DISPRO)
********YYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIKNP*************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIKNPNIDRGLQTYKTPT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	104	2.2.26 [Sep-21-2011]
O15155	118	BET1 homolog OS=Homo sapi	yes	N/A	0.605	0.533	0.515	8e-11
Q62896	118	BET1 homolog OS=Rattus no	yes	N/A	0.605	0.533	0.515	2e-10
O35623	118	BET1 homolog OS=Mus muscu	yes	N/A	0.596	0.525	0.523	2e-10
O13932	117	Protein transport protein	yes	N/A	0.576	0.512	0.377	9e-06
O35153	111	BET1-like protein OS=Mus	no	N/A	0.567	0.531	0.383	0.0006

>sp|O15155|BET1_HUMAN BET1 homolog OS=Homo sapiens GN=BET1 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)

Query: 18 DGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNS 77
           G  A  +ENE+LT  LR+K+ A+KSL+I+IG EVK QN+ LL  MD  FD T GFL  +
Sbjct: 23 SGYSACEEENERLTESLRSKVTAIKSLSIEIGHEVKTQNK-LLAEMDSQFDSTTGFLGKT 81

Query: 78 MARV 81
          M ++
Sbjct: 82 MGKL 85

Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE involved in the docking process of ER-derived vesicles with the cis-Golgi membrane.
Homo sapiens (taxid: 9606)

>sp|Q62896|BET1_RAT BET1 homolog OS=Rattus norvegicus GN=Bet1 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 18 DGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNS 77
           G +A  +EN++LT  LR+K+ A+KSL+I+IG EVK QN+ LL  MD  FD T GFL  +
Sbjct: 23 SGYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK-LLAEMDSQFDSTTGFLGKT 81

Query: 78 MARV 81
          M R+
Sbjct: 82 MGRL 85

Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE involved in the docking process of ER-derived vesicles with the cis-Golgi membrane.

Rattus norvegicus (taxid: 10116)

>sp|O35623|BET1_MOUSE BET1 homolog OS=Mus musculus GN=Bet1 PE=3 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)

Query: 19 GGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSM 78
          G +A  +EN++LT  LR+K+ A+KSL+I+IG EVK QN+ LL  MD  FD T GFL  +M
Sbjct: 24 GYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK-LLAEMDSQFDSTTGFLGKTM 82

Query: 79 ARV 81
           R+
Sbjct: 83 GRL 85

Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE involved in the docking process of ER-derived vesicles with the cis-Golgi membrane.

Mus musculus (taxid: 10090)

>sp|O13932|BET1_SCHPO Protein transport protein bet1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bet1 PE=3 SV=1

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
          D++  EN++  S L  K+++LK LT++IGTE+   +  L+  M+D FD T   L+ +M R
Sbjct: 28 DSLENENDERISKLTGKVKSLKELTMNIGTEIT-SSTKLMESMNDSFDSTKSLLSGTMTR 86

Query: 81 V 81
          +
Sbjct: 87 L 87

SNARE required for targeting and fusion of ER-derived transport vesicles with the Golgi complex.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|O35153|BET1L_MOUSE BET1-like protein OS=Mus musculus GN=Bet1l PE=3 SV=1

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
          D + +EN+++   L +K+  LKSL +DI  + + QN + L GMD DF    G L  S+ R
Sbjct: 15 DILDRENKRMADSLASKVTRLKSLALDIDRDTEDQNRY-LDGMDSDFTSVTGLLTGSVKR 73

Vesicle SNARE required for targeting and fusion of retrograde transport vesicles with the Golgi complex. Required for the integrity of the Golgi complex.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	104
307209976	113	BET1-like protein [Harpegnathos saltator	0.769	0.707	0.614	6e-20
350539285	121	uncharacterized protein LOC100571150 [Ac	0.769	0.661	0.585	1e-18
332026180	112	BET1-like protein [Acromyrmex echinatior	0.759	0.705	0.578	1e-18
91092516	110	PREDICTED: similar to CG14084 CG14084-PA	0.75	0.709	0.560	8e-18
307175728	113	BET1-like protein [Camponotus floridanus	0.769	0.707	0.566	4e-17
380014688	112	PREDICTED: BET1 homolog [Apis florea]	0.769	0.714	0.560	5e-17
110751020	112	PREDICTED: BET1 homolog [Apis mellifera]	0.769	0.714	0.560	6e-17
383850578	112	PREDICTED: BET1 homolog [Megachile rotun	0.769	0.714	0.548	8e-17
156541564	111	PREDICTED: BET1 homolog [Nasonia vitripe	0.759	0.711	0.536	2e-16
332375092	108	unknown [Dendroctonus ponderosae]	0.721	0.694	0.580	5e-16

>gi|307209976|gb|EFN86745.1| BET1-like protein [Harpegnathos saltator]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/83 (61%), Positives = 67/83 (80%), Gaps = 3/83 (3%)

Query: 1  MRRQHAGNY-YEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHL 59
          MRR H+G Y YEP+P+     +A+  ENE++T +LR+KI ALKSL+IDIGTEVKYQ++ +
Sbjct: 1  MRRSHSGGYGYEPLPST-STQNAMEDENERVTEELRDKIHALKSLSIDIGTEVKYQDK-M 58

Query: 60 LRGMDDDFDRTGGFLNNSMARVV 82
          LR MDDDFDRT GFL+ S+ARV+
Sbjct: 59 LRSMDDDFDRTSGFLSGSVARVL 81

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350539285|ref|NP_001232939.1| uncharacterized protein LOC100571150 [Acyrthosiphon pisum] gi|239791927|dbj|BAH72366.1| ACYPI21107 [Acyrthosiphon pisum]

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 2/82 (2%)

Query: 1  MRRQHAGNYYEPVP-NQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHL 59
          MRR H GNYY+P+P N   GG+ I  EN+ LT  L++K+  LKSL+IDIG EVKYQ + L
Sbjct: 8  MRRSHGGNYYDPLPSNSSYGGEFIETENDDLTEQLKDKVNTLKSLSIDIGAEVKYQ-DRL 66

Query: 60 LRGMDDDFDRTGGFLNNSMARV 81
          LR MD DF+ TGGFL+N++ RV
Sbjct: 67 LRDMDHDFETTGGFLSNTLGRV 88

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332026180|gb|EGI66322.1| BET1-like protein [Acromyrmex echinatior]

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 66/83 (79%), Gaps = 4/83 (4%)

Query: 1  MRRQHAGNY-YEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHL 59
          MRR H+G Y YEP+P+     + +  ENE++T +L++KI ALKSL+IDIGTEVKYQ++ +
Sbjct: 1  MRRSHSGGYGYEPLPST--SHNVVEDENERMTEELKDKIHALKSLSIDIGTEVKYQDK-M 57

Query: 60 LRGMDDDFDRTGGFLNNSMARVV 82
          L+GMDDDFDRT G L+ S+ARV+
Sbjct: 58 LKGMDDDFDRTSGSLSGSVARVL 80

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91092516|ref|XP_969661.1| PREDICTED: similar to CG14084 CG14084-PA [Tribolium castaneum] gi|270012892|gb|EFA09340.1| hypothetical protein TcasGA2_TC001666 [Tribolium castaneum]

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 46/82 (56%), Positives = 64/82 (78%), Gaps = 4/82 (4%)

Query: 1  MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLL 60
          MRR HAGNYYEP+P      + + +EN+++ ++LR+K+ ALKSL+IDIG E+KYQ++ LL
Sbjct: 1  MRRAHAGNYYEPLPQT---SNEVEEENDRMANELRDKVGALKSLSIDIGNELKYQDK-LL 56

Query: 61 RGMDDDFDRTGGFLNNSMARVV 82
          R +DDD DRT GFL N+M RV+
Sbjct: 57 RDVDDDMDRTRGFLGNTMNRVL 78

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307175728|gb|EFN65586.1| BET1-like protein [Camponotus floridanus]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/83 (56%), Positives = 64/83 (77%), Gaps = 3/83 (3%)

Query: 1  MRRQHAGNY-YEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHL 59
          MRR H+G Y YEP+P+     +AI  E+E++T +L++KI  LKSL+IDIGTEVKYQ++ L
Sbjct: 1  MRRSHSGGYSYEPLPST-STHNAIEDESERMTEELKHKIHTLKSLSIDIGTEVKYQDK-L 58

Query: 60 LRGMDDDFDRTGGFLNNSMARVV 82
          LR MDDDF+RT G L+ S+ RV+
Sbjct: 59 LRNMDDDFERTSGSLSGSVTRVL 81

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014688|ref|XP_003691354.1| PREDICTED: BET1 homolog [Apis florea]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 2/82 (2%)

Query: 1  MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLL 60
          MRR H    YEP+P      D +  ENE++T  L++KI ALKSL+IDIG EV+YQ++ LL
Sbjct: 1  MRRSHTNYSYEPLPTT-SSHDGLEDENEKMTEHLKDKIYALKSLSIDIGQEVQYQDK-LL 58

Query: 61 RGMDDDFDRTGGFLNNSMARVV 82
          RGMD+DF+RT G L NS+ARV+
Sbjct: 59 RGMDEDFERTSGSLTNSVARVL 80

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110751020|ref|XP_001122558.1| PREDICTED: BET1 homolog [Apis mellifera]

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 2/82 (2%)

Query: 1  MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLL 60
          MRR H    YEP+P      D +  ENE++T  L++KI ALKSL+IDIG EV+YQ++ LL
Sbjct: 1  MRRSHTNYSYEPLPTT-SSHDGLEDENERMTEHLKDKIYALKSLSIDIGQEVQYQDK-LL 58

Query: 61 RGMDDDFDRTGGFLNNSMARVV 82
          RGMD+DF+RT G L NS+ARV+
Sbjct: 59 RGMDEDFERTSGSLTNSVARVL 80

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850578|ref|XP_003700872.1| PREDICTED: BET1 homolog [Megachile rotundata]

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 63/82 (76%), Gaps = 2/82 (2%)

Query: 1  MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLL 60
          MRR H+   YEP+P      D +  ENE++T+ L++KI ALKSL+IDIGTEV+YQ++ +L
Sbjct: 1  MRRAHSNYAYEPLPTT-SNHDNLEDENERMTNHLKDKIHALKSLSIDIGTEVQYQDK-ML 58

Query: 61 RGMDDDFDRTGGFLNNSMARVV 82
          RGMD+DF+RT G L +S+ARV+
Sbjct: 59 RGMDEDFERTSGSLTSSVARVL 80

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156541564|ref|XP_001600460.1| PREDICTED: BET1 homolog [Nasonia vitripennis]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 61/82 (74%), Gaps = 3/82 (3%)

Query: 1  MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLL 60
          MRR H+G  YEP+P+      ++ +EN+Q+   L+ KI ALKSL+IDIGTEVKYQN+ +L
Sbjct: 1  MRRTHSGYGYEPLPST--SSHSLEEENDQMAEQLKEKISALKSLSIDIGTEVKYQNK-ML 57

Query: 61 RGMDDDFDRTGGFLNNSMARVV 82
            MDDDF+RT G L+ S+AR++
Sbjct: 58 GDMDDDFERTSGSLSGSVARIL 79

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332375092|gb|AEE62687.1| unknown [Dendroctonus ponderosae]

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/81 (58%), Positives = 60/81 (74%), Gaps = 6/81 (7%)

Query: 1  MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLL 60
          MRR H   +YEP+P   D   AI QENE++T +L  KI  LKSL+IDIGTEV++Q++ LL
Sbjct: 1  MRRSH---HYEPLPQ--DANSAIEQENERMTHELAEKIGVLKSLSIDIGTEVQHQHK-LL 54

Query: 61 RGMDDDFDRTGGFLNNSMARV 81
          R +DDD DRTGGFL  +M+RV
Sbjct: 55 RDVDDDMDRTGGFLGKTMSRV 75

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	104
FB|FBgn0260857	117	Bet1 [Drosophila melanogaster	0.740	0.658	0.573	2e-17
UNIPROTKB|A6H7A4	118	BET1 "Uncharacterized protein"	0.692	0.610	0.519	3.4e-13
UNIPROTKB|F1SFA8	118	BET1 "Uncharacterized protein"	0.673	0.593	0.52	5.6e-13
ZFIN|ZDB-GENE-040625-3	113	bet1 "blocked early in transpo	0.778	0.716	0.464	1.7e-11
UNIPROTKB|E1BRC4	115	BET1 "Uncharacterized protein"	0.759	0.686	0.464	2.2e-11
MGI|MGI:1343104	118	Bet1 "blocked early in transpo	0.596	0.525	0.523	2.2e-11
RGD|2203	118	Bet1 "Bet1 golgi vesicular mem	0.596	0.525	0.523	2.2e-11
UNIPROTKB|O15155	118	BET1 "BET1 homolog" [Homo sapi	0.596	0.525	0.523	2.8e-11
WB|WBGene00043064	107	nbet-1 [Caenorhabditis elegans	0.644	0.626	0.414	4.2e-08
POMBASE|SPAC23C4.13	117	bet1 "SNARE Bet1 (predicted)"	0.576	0.512	0.377	2.3e-07

FB|FBgn0260857 Bet1 [Drosophila melanogaster (taxid:7227)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 51/89 (57%), Positives = 61/89 (68%)

Query:     1 MRRQHAGNY-YEPVPNQFDGG------DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVK 53
             MRR    NY Y+P+ NQ   G      DA+  ENEQ   +L+ KI ALKSLTIDIG EV+
Sbjct:     1 MRRN---NYPYQPL-NQHPSGPHPASHDALEAENEQAAEELKQKIGALKSLTIDIGNEVR 56

Query:    54 YQNEHLLRGMDDDFDRTGGFLNNSMARVV 82
             YQ++ LLRG+DDD DRT GFL N+M RVV
Sbjct:    57 YQDK-LLRGIDDDMDRTSGFLGNAMTRVV 84

GO:0016192 "vesicle-mediated transport" evidence=ISS

GO:0005484 "SNAP receptor activity" evidence=ISS

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|A6H7A4 BET1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 40/77 (51%), Positives = 51/77 (66%)

Query:     7 GNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDD 66
             GNY    PN   G  A  +ENE+LT  LRNK+ A+KSL+I+IG EVK+QN+ LL  MD  
Sbjct:    16 GNY--GYPNS--GYSACEEENERLTESLRNKVTAIKSLSIEIGHEVKHQNK-LLAEMDSQ 70

Query:    67 FDRTGGFLNNSMARVVL 83
             FD T GFL  +M ++ L
Sbjct:    71 FDSTTGFLGKTMGKLKL 87

GO:0000139 "Golgi membrane" evidence=IEA

UNIPROTKB|F1SFA8 BET1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 39/75 (52%), Positives = 50/75 (66%)

Query:     7 GNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDD 66
             GNY    PN   G  A  +ENE+LT  LRNK+ A+KSL+I+IG EVK+QN+ LL  MD  
Sbjct:    16 GNY--GYPNS--GYSACEEENERLTESLRNKVTAIKSLSIEIGHEVKHQNK-LLAEMDSQ 70

Query:    67 FDRTGGFLNNSMARV 81
             FD T GFL  +M ++
Sbjct:    71 FDSTTGFLGKTMGKL 85

GO:0000139 "Golgi membrane" evidence=IEA

ZFIN|ZDB-GENE-040625-3 bet1 "blocked early in transport 1 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 39/84 (46%), Positives = 50/84 (59%)

Query:     1 MRRQHAGNYYEPVPNQFDGGDAIHQE-NEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHL 59
             MRR   G    P  N    G ++++E NE L   LR+K+ ALK L+IDIG EVK  N+ +
Sbjct:     1 MRRAGLGEG-GPQGNYVASGYSVYEEENEHLQEGLRDKVHALKHLSIDIGNEVKIHNK-M 58

Query:    60 LRGMDDDFDRTGGFLNNSMARVVL 83
             L  MD DFD TGG L  +M R+ L
Sbjct:    59 LGEMDSDFDSTGGLLGATMGRLKL 82

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|E1BRC4 BET1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 39/84 (46%), Positives = 54/84 (64%)

Query:     1 MRRQHAGNYYEPVPNQ--FDGGDAIHQE-NEQLTSDLRNKIQALKSLTIDIGTEVKYQNE 57
             MRR   G+   P  N    + G ++++E NE+LT  LR K+ A+KSL+I+IGTEVK QN+
Sbjct:     1 MRRAGLGDG-APTGNYGYTNSGYSVYEEENERLTESLRTKVSAIKSLSIEIGTEVKNQNK 59

Query:    58 HLLRGMDDDFDRTGGFLNNSMARV 81
              LL  MD+DFD   G L  +M R+
Sbjct:    60 -LLSEMDNDFDSATGLLGATMGRL 82

GO:0000139 "Golgi membrane" evidence=IEA

MGI|MGI:1343104 Bet1 "blocked early in transport 1 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 33/63 (52%), Positives = 45/63 (71%)

Query:    19 GGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSM 78
             G +A  +EN++LT  LR+K+ A+KSL+I+IG EVK QN+ LL  MD  FD T GFL  +M
Sbjct:    24 GYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK-LLAEMDSQFDSTTGFLGKTM 82

Query:    79 ARV 81
              R+
Sbjct:    83 GRL 85

GO:0000139 "Golgi membrane" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005801 "cis-Golgi network" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISO

GO:0016192 "vesicle-mediated transport" evidence=TAS

GO:0031201 "SNARE complex" evidence=ISO

GO:0031985 "Golgi cisterna" evidence=ISO

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=ISO

RGD|2203 Bet1 "Bet1 golgi vesicular membrane trafficking protein" [Rattus norvegicus (taxid:10116)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 33/63 (52%), Positives = 45/63 (71%)

Query:    19 GGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSM 78
             G +A  +EN++LT  LR+K+ A+KSL+I+IG EVK QN+ LL  MD  FD T GFL  +M
Sbjct:    24 GYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK-LLAEMDSQFDSTTGFLGKTM 82

Query:    79 ARV 81
              R+
Sbjct:    83 GRL 85

GO:0000139 "Golgi membrane" evidence=IEA;ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005801 "cis-Golgi network" evidence=IDA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IDA

GO:0031201 "SNARE complex" evidence=IDA;TAS

GO:0031985 "Golgi cisterna" evidence=IDA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IDA

UNIPROTKB|O15155 BET1 "BET1 homolog" [Homo sapiens (taxid:9606)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 33/63 (52%), Positives = 44/63 (69%)

Query:    19 GGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSM 78
             G  A  +ENE+LT  LR+K+ A+KSL+I+IG EVK QN+ LL  MD  FD T GFL  +M
Sbjct:    24 GYSACEEENERLTESLRSKVTAIKSLSIEIGHEVKTQNK-LLAEMDSQFDSTTGFLGKTM 82

Query:    79 ARV 81
              ++
Sbjct:    83 GKL 85

GO:0015031 "protein transport" evidence=IEA

GO:0005801 "cis-Golgi network" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0031985 "Golgi cisterna" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

WB|WBGene00043064 nbet-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query:    14 PNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGF 73
             PNQ    + + + N+ L   L +K+ ALK +TI IG +V+ QN  LL  MD+DFD + G 
Sbjct:    11 PNQ--DANYLERHNDDLVGGLSSKVAALKRVTIAIGDDVREQNR-LLNDMDNDFDSSKGL 67

Query:    74 LNNSMARVVL 83
             L ++M R+ L
Sbjct:    68 LQSTMRRLGL 77

GO:0016021 "integral to membrane" evidence=IEA

POMBASE|SPAC23C4.13 bet1 "SNARE Bet1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 23/61 (37%), Positives = 39/61 (63%)

Query:    21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
             D++  EN++  S L  K+++LK LT++IGTE+    + L+  M+D FD T   L+ +M R
Sbjct:    28 DSLENENDERISKLTGKVKSLKELTMNIGTEITSSTK-LMESMNDSFDSTKSLLSGTMTR 86

Query:    81 V 81
             +
Sbjct:    87 L 87

GO:0000139 "Golgi membrane" evidence=IEA

GO:0000329 "fungal-type vacuole membrane" evidence=IDA

GO:0005484 "SNAP receptor activity" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006886 "intracellular protein transport" evidence=NAS

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O35623	BET1_MOUSE	No assigned EC number	0.5238	0.5961	0.5254	yes	N/A
O15155	BET1_HUMAN	No assigned EC number	0.5156	0.6057	0.5338	yes	N/A
Q62896	BET1_RAT	No assigned EC number	0.5156	0.6057	0.5338	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	104
pfam05739	62	pfam05739, SNARE, SNARE domain	1e-05
smart00397	66	smart00397, t_SNARE, Helical region found in SNARE	3e-04
cd00193	60	cd00193, t_SNARE, Soluble NSF (N-ethylmaleimide-se	3e-04

>gnl|CDD|203323 pfam05739, SNARE, SNARE domain

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 27 NEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVV 82
           ++   +L + I  LK L +D+G EV+ Q E LL  +DD+ D T   +  +  R+ 
Sbjct: 1  RDEALEELESSIGELKQLFLDMGEEVEEQGE-LLDRIDDNVDNTQSRVERANKRLK 55

Most if not all vesicular membrane fusion events in eukaryotic cells are believed to be mediated by a conserved fusion machinery, the SNARE [soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein (SNAP) receptors] machinery. The SNARE domain is thought to act as a protein-protein interaction module in the assembly of a SNARE protein complex. Length = 62

>gnl|CDD|197699 smart00397, t_SNARE, Helical region found in SNAREs

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
           A  +E ++    L   IQ LK + +D+GTE++ Q E  L  ++D+ D     L  +  R
Sbjct: 4  LAREEERDEELEQLEKSIQELKQIFLDMGTELEEQGE-QLDRIEDNVDDADVNLKKANKR 62

Query: 81 V 81
          +
Sbjct: 63 L 63

All alpha-helical motifs that form twisted and parallel four-helix bundles in target soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein (SNAP) receptor proteins. This motif found in "Q-SNAREs". Length = 66

>gnl|CDD|238115 cd00193, t_SNARE, Soluble NSF (N-ethylmaleimide-sensitive fusion protein)-Attachment protein (SNAP) REceptor domain; these alpha-helical motifs form twisted and parallel heterotetrameric helix bundles; the core complex contains one helix from a protein that is anchored in the vesicle membrane (synaptobrevin), one helix from a protein of the target membrane (syntaxin), and two helices from another protein anchored in the target membrane (SNAP-25); their interaction forms a core which is composed of a polar zero layer, a flanking leucine-zipper layer acts as a water tight shield to isolate ionic interactions in the zero layer from the surrounding solvent

 Score = 35.5 bits (83), Expect = 3e-04
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 24 HQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARV 81
           QE ++    L   I  LK + +D+GTEV+ Q E L R ++D+ D     +  +  R+
Sbjct: 1  EQERDEELEQLEASIGELKQIFLDLGTEVEEQGELLDR-IEDNVDNADVNVKRANKRL 57

Length = 60

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	104
KOG3385|consensus	118		99.88
PF05739	63	SNARE: SNARE domain; InterPro: IPR000727 The proce	99.41
KOG3202|consensus	235		99.37
cd00193	60	t_SNARE Soluble NSF (N-ethylmaleimide-sensitive fu	99.11
smart00397	66	t_SNARE Helical region found in SNAREs. All alpha-	98.97
KOG3065|consensus	273		98.53
PF09753	251	Use1: Membrane fusion protein Use1; InterPro: IPR0	96.93
PF12352	66	V-SNARE_C: Snare region anchored in the vesicle me	95.53
KOG0810|consensus	297		94.6
KOG0811|consensus	269		92.23
COG5325	283	t-SNARE complex subunit, syntaxin [Intracellular t	91.64
KOG2678|consensus	244		89.03
PF07889	126	DUF1664: Protein of unknown function (DUF1664); In	88.99
PF03908	92	Sec20: Sec20; InterPro: IPR005606 Sec20 is a membr	88.97
COG5074	280	t-SNARE complex subunit, syntaxin [Intracellular t	84.46

>KOG3385|consensus

Probab=99.88  E-value=3.3e-23  Score=146.25  Aligned_cols=91  Identities=37%  Similarity=0.527  Sum_probs=78.3

Q ss_pred             CCcCCCCCCCCC----CCCCCCC--cchHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccch
Q psy7549           1 MRRQHAGNYYEP----VPNQFDG--GDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFL   74 (104)
Q Consensus         1 ~~~~~~~~~~~~----~p~~~~~--~~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L   74 (104)
                      |+|.+++++-+|    ....+|+  .+.+|+|||+.++.|..||.+||.|+++||+||+.||+ +||.|+++||++.++|
T Consensus         2 ~~R~g~~dg~~~l~~~~~~a~ss~~~~~le~ENee~~e~L~~kV~aLKsLs~dIg~Ev~~qnk-lld~mdddfdsts~~L   80 (118)
T KOG3385|consen    2 GSRFGLFDGSNGLEDGVSRASSSSHLASLERENEEAAESLQQKVKALKSLSLDIGDEVRTQNK-LLDGMDDDFDSTSGFL   80 (118)
T ss_pred             CcccCcccCCCcccccccccCchhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccchHHH-HHHHhccchhhhHHHH
Confidence            678888777555    2222222  38888999999999999999999999999999999999 9999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCchh
Q psy7549          75 NNSMARVVLDIEKIKNPNI   93 (104)
Q Consensus        75 ~~t~~Rl~~m~~~~~n~~~   93 (104)
                      ++||.|++.|+++ +++.+
T Consensus        81 ~gtm~r~~~~ar~-sg~~l   98 (118)
T KOG3385|consen   81 SGTMGRLKTMARR-SGISL   98 (118)
T ss_pred             HHHHHHHHHHHhc-CCcch
Confidence            9999999999998 55444

>PF05739 SNARE: SNARE domain; InterPro: IPR000727 The process of vesicular fusion with target membranes depends on a set of SNAREs (SNAP-Receptors), which are associated with the fusing membranes [, ]

Probab=99.41  E-value=1.5e-12  Score=80.49  Aligned_cols=62  Identities=31%  Similarity=0.454  Sum_probs=58.8

Q ss_pred             hhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHHhc
Q psy7549          26 ENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKI   88 (104)
Q Consensus        26 qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~~~   88 (104)
                      |+|+.++.|+..|..||+++.+|++||++|+. +||.+++.|+++...|..+.++|.++.+..
T Consensus         1 e~d~~l~~l~~~i~~l~~~~~~i~~ev~~Q~~-~ld~i~~~vd~~~~~l~~~~~~l~ka~~~~   62 (63)
T PF05739_consen    1 ERDEELDELEQSIQELKQMFQDIGEEVEEQNE-MLDRIEDNVDRANENLKKGNKKLKKALKYQ   62 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHCHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            45779999999999999999999999999999 999999999999999999999999998754

Target SNAREs (t-SNAREs) are localised on the target membrane and belong to two different families, the syntaxin-like family and the SNAP-25 like family. One member of each family, together with a v-SNARE localised on the vesicular membrane, are required for fusion. The Syntaxins are type-I transmembrane proteins that contain several regions with coiled-coil propensity in their cytosolic part, the SNARE motif. SNAP-25 (IPR000928 from INTERPRO) is a protein consisting of two coiled-coil regions, which is associated with the membrane by lipid anchors. SNARE motifs assemble into parallel four helix bundles stabilised by the burial of these hydrophobic helix faces in the bundle core. Monomeric SNARE motifs are disordered so this assembly reaction is accompanied by a dramatic increase in alpha-helical secondary structure []. The parallel arrangement of SNARE motifs within complexes bring the transmembrane anchors, and the two membranes, into close proximity. Recently, it was shown that the two coiled-coil regions of SNAP-25 and one of the coiled-coil regions of the syntaxins are related []. This domain is found in both Syntaxin and SNAP-25 families as well as in other proteins.; GO: 0005515 protein binding; PDB: 1URQ_B 3RL0_R 1HVV_B 1SFC_B 1N7S_B 3IPD_B 3C98_B 3HD7_F 3RK2_B 1KIL_B ....

>KOG3202|consensus

Probab=99.37  E-value=1.8e-12  Score=100.92  Aligned_cols=67  Identities=27%  Similarity=0.409  Sum_probs=61.6

Q ss_pred             hHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHHhcC
Q psy7549          22 AIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIK   89 (104)
Q Consensus        22 ~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~~~~   89 (104)
                      .|-+|.|+.+|.|++.|++||++|..||+|++.|+. |||+|+++||+|.++|.+.++++.+|.+..+
T Consensus       145 qm~~eQDe~Ld~ls~ti~rlk~~a~~~g~EL~~Q~~-llDdl~~e~d~t~srl~~~~~~l~~v~~~~s  211 (235)
T KOG3202|consen  145 QMLQEQDEGLDGLSATVQRLKGMALAMGEELEEQGR-LLDDLDNEMDRTESRLDRVMKRLAKVNRMAS  211 (235)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            444455889999999999999999999999999999 9999999999999999999999999998544

>cd00193 t_SNARE Soluble NSF (N-ethylmaleimide-sensitive fusion protein)-Attachment protein (SNAP) REceptor domain; these alpha-helical motifs form twisted and parallel heterotetrameric helix bundles; the core complex contains one helix from a protein that is anchored in the vesicle membrane (synaptobrevin), one helix from a protein of the target membrane (syntaxin), and two helices from another protein anchored in the target membrane (SNAP-25); their interaction forms a core which is composed of a polar zero layer, a flanking leucine-zipper layer acts as a water tight shield to isolate ionic interactions in the zero layer from the surrounding solvent

Probab=99.11  E-value=3.1e-10  Score=68.23  Aligned_cols=58  Identities=31%  Similarity=0.444  Sum_probs=54.8

Q ss_pred             HhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHH
Q psy7549          25 QENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVL   83 (104)
Q Consensus        25 ~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~   83 (104)
                      ++++..++.|+..|..|++++.+|+.||..|+. +||.+++.++.+...++.+.+++.+
T Consensus         2 ~e~~~~l~~l~~~i~~l~~l~~~i~~~v~~Q~~-~ld~i~~~~~~~~~~~~~~~~~l~k   59 (60)
T cd00193           2 QERDEELEQLEASIGELKQIFLDLGTEVEEQGE-LLDRIEDNVDNADVNVKRANKRLKK   59 (60)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            455778999999999999999999999999999 9999999999999999999999875

>smart00397 t_SNARE Helical region found in SNAREs

Probab=98.97  E-value=3.1e-09  Score=64.64  Aligned_cols=62  Identities=27%  Similarity=0.427  Sum_probs=57.0

Q ss_pred             chHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHH
Q psy7549          21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVL   83 (104)
Q Consensus        21 ~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~   83 (104)
                      ..+.++.+..++.|+..|..+|+++.+|+.||..|+. +||.+++.++.+...++.+.+++.+
T Consensus         4 ~~~~~~~~~~l~~l~~~i~~l~~l~~~i~~~v~~Q~~-~ld~i~~~~d~~~~~~~~~~~~l~~   65 (66)
T smart00397        4 DQMEEERDEELEQLEKSIGELKQIFLDMGTELEEQGE-QLDRIEDNVDDADVNLKKANKRLKK   65 (66)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            3455666889999999999999999999999999999 9999999999999999999999875

All alpha-helical motifs that form twisted and parallel four-helix bundles in target soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein (SNAP) receptor proteins. This motif found in "Q-SNAREs".

>KOG3065|consensus

Probab=98.53  E-value=4.4e-07  Score=72.13  Aligned_cols=63  Identities=25%  Similarity=0.344  Sum_probs=60.2

Q ss_pred             chHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHH
Q psy7549          21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLD   84 (104)
Q Consensus        21 ~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m   84 (104)
                      ...|.|-|+-|++|+.-+.+||.|++++|.||+.||. .||.+.+..|+....|..+.+|+.++
T Consensus       210 ~~~edeiD~NL~qis~~lg~LK~mA~dmg~Eie~Qn~-~Ld~I~~k~d~~d~~v~~~n~R~~kL  272 (273)
T KOG3065|consen  210 PAAEDEIDENLDQLSAILGRLKNMALDMGSEIESQNE-RLDRIEDKVDRLDLRVDKANKRAKKL  272 (273)
T ss_pred             ChhhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHhHHHHHHHhhhhHHHHHHHHHHhc
Confidence            6778888999999999999999999999999999999 99999999999999999999999876

>PF09753 Use1: Membrane fusion protein Use1; InterPro: IPR019150 This entry represents a family of proteins, approximately 300 residues in length, involved in vesicle transport

Probab=96.93  E-value=0.0059  Score=47.12  Aligned_cols=68  Identities=19%  Similarity=0.186  Sum_probs=62.0

Q ss_pred             HhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHHhcCCchh
Q psy7549          25 QENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIKNPNI   93 (104)
Q Consensus        25 ~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~~~~n~~~   93 (104)
                      ...|.+.++|..=.+.||+-+..+++=+++.+. .|+......|+....|+....|+....+++.++++
T Consensus       163 ~~QE~L~~em~~La~~LK~~s~~~~~~l~~D~~-~L~~~~~~~d~n~~~l~~~~~rl~~~~~~~~~~~~  230 (251)
T PF09753_consen  163 NLQEDLTEEMLSLARQLKENSLAFSQILKEDNK-VLDRTEEGLDRNLSSLKRESKRLKEHSSKSWGCWT  230 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence            344668899999999999999999999999999 99999999999999999999999999987777555

They have a single C-terminal transmembrane domain and a SNARE [soluble NSF (N-ethylmaleimide-sensitive fusion protein) attachment protein receptor] domain of approximately 60 residues. The SNARE domains are essential for membrane fusion and are conserved from yeasts to humans. Use1 is one of the three protein subunits that make up the SNARE complex and it is specifically required for Golgi-endoplasmic reticulum retrograde transport [].

>PF12352 V-SNARE_C: Snare region anchored in the vesicle membrane C-terminus; PDB: 1GL2_C 2NPS_C

Probab=95.53  E-value=0.15  Score=31.50  Aligned_cols=64  Identities=13%  Similarity=0.119  Sum_probs=54.3

Q ss_pred             hHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHHh
Q psy7549          22 AIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEK   87 (104)
Q Consensus        22 ~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~~   87 (104)
                      .|..+++ .++.=...+.-.-++|.+|-.++..|++ .|......++.+...|..+-+-|.+|.+.
T Consensus         2 ~l~~e~~-~L~~s~~~~~e~~~~g~~~l~~L~~Qre-~L~~~~~kl~~i~~~l~~s~~~l~~I~rR   65 (66)
T PF12352_consen    2 RLLRESD-SLQRSHRMADETEEIGAATLEDLRSQRE-QLKRVRDKLDDIDSNLPKSNSLLKRISRR   65 (66)
T ss_dssp             HHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhHHHHHHHHHHcc
Confidence            3555655 5567777788888999999999999999 99999999999999999998888888764

>KOG0810|consensus

Probab=94.60  E-value=0.18  Score=40.73  Aligned_cols=61  Identities=15%  Similarity=0.355  Sum_probs=53.9

Q ss_pred             hHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHH
Q psy7549          22 AIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLD   84 (104)
Q Consensus        22 ~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m   84 (104)
                      .+++.-+ .+-.|...+.-|.+|..+|-..|..|.+ ++|.+...+.++..-+..+...+.+.
T Consensus       200 Eiq~Rh~-~ik~LEksi~ELhqlFlDMa~LVe~QgE-mvd~IE~nV~~A~~~V~~g~~~~~kA  260 (297)
T KOG0810|consen  200 EIQERHD-EIKKLEKSIRELHQLFLDMAVLVESQGE-MVDRIENNVENAVDYVEQGVDHLKKA  260 (297)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444 4578999999999999999999999999 99999999999999999999999963

>KOG0811|consensus

Probab=92.23  E-value=0.71  Score=36.91  Aligned_cols=58  Identities=17%  Similarity=0.267  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHH
Q psy7549          28 EQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIE   86 (104)
Q Consensus        28 D~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~   86 (104)
                      ++.+..|...|.-+-+|..+++.=|.+|.. +.|++++..+++...+..+...|.+.++
T Consensus       179 ~q~I~~lE~dI~dvN~IFkdL~~lV~eQG~-~VDsIe~nve~a~~nveqg~~~L~kA~~  236 (269)
T KOG0811|consen  179 EQAIEQLEADIIDVNEIFKDLGSLVHEQGE-LVDSIEANVENASVNVEQGTENLRKAAK  236 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456788999999999999999999999999 9999999999999999999999999874

>COG5325 t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion]

Probab=91.64  E-value=0.75  Score=37.21  Aligned_cols=62  Identities=23%  Similarity=0.274  Sum_probs=57.2

Q ss_pred             HHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHH
Q psy7549          23 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDI   85 (104)
Q Consensus        23 lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~   85 (104)
                      |-.|-++.+..|..-|.-|-.|..+++.=|.+|.. +.|.++--.+.+..-++++-+-|.+..
T Consensus       189 l~~er~~eI~~l~~gI~Eln~IF~dL~~lV~eQG~-lVdrID~Ni~~t~~n~k~A~kEL~kA~  250 (283)
T COG5325         189 LITERDEEIKNLARGIYELNEIFRDLGSLVGEQGE-LVDRIDFNIENTSDNLKNANKELEKAP  250 (283)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHhhhhhhhhHHHHhhHHHHHHhH
Confidence            34455788999999999999999999999999999 999999999999999999999999966

>KOG2678|consensus

Probab=89.03  E-value=1.7  Score=34.39  Aligned_cols=68  Identities=16%  Similarity=0.113  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHHhcCCchhhhhc
Q psy7549          29 QLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIKNPNIDRGL   97 (104)
Q Consensus        29 ~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~~~~n~~~~~~l   97 (104)
                      ++.+.|..-++.||..+.+-++=+++.|+ .|.-+.-..|.....|+....|+.+-++++...|++.++
T Consensus       155 eLaesll~LArslKtnalAfqsalkeDnQ-vl~~~~k~~D~N~~~L~~~Serve~y~ksk~s~wf~~~m  222 (244)
T KOG2678|consen  155 ELAESLLKLARSLKTNALAFQSALKEDNQ-VLGAAEKGIDVNSQGLMDVSERVEKYDKSKLSYWFYITM  222 (244)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhhHH-HHHHHHHHHhHHHHHHHhhhHHHHHHHHhhhhHHHHHHH
Confidence            36788888899999999999999999999 999999999999999999999999999888544554443

>PF07889 DUF1664: Protein of unknown function (DUF1664); InterPro: IPR012458 The members of this family are hypothetical plant proteins of unknown function

Probab=88.99  E-value=3.1  Score=29.81  Aligned_cols=59  Identities=17%  Similarity=0.165  Sum_probs=48.2

Q ss_pred             hhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHH
Q psy7549          26 ENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDI   85 (104)
Q Consensus        26 qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~   85 (104)
                      +--..|+.|..|+..++.++..|.+||.+=.. -++.+.++++..+..+..-=.+|..+-
T Consensus        65 hLsqRId~vd~klDe~~ei~~~i~~eV~~v~~-dv~~i~~dv~~v~~~V~~Le~ki~~ie  123 (126)
T PF07889_consen   65 HLSQRIDRVDDKLDEQKEISKQIKDEVTEVRE-DVSQIGDDVDSVQQMVEGLEGKIDEIE  123 (126)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44567888999999999999999999988777 788899999988887777766666553

The region featured in this family is approximately 100 amino acids long.

>PF03908 Sec20: Sec20; InterPro: IPR005606 Sec20 is a membrane glycoprotein associated with secretory pathway

Probab=88.97  E-value=3.3  Score=27.28  Aligned_cols=58  Identities=12%  Similarity=0.048  Sum_probs=44.6

Q ss_pred             hhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHHh--cCCchhhhhcceee
Q psy7549          43 SLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEK--IKNPNIDRGLQTYK  101 (104)
Q Consensus        43 ~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~~--~~n~~~~~~l~~~~  101 (104)
                      .-+..=-+++.+|+. -|..+++.++...+.|..+.+-+..+-+.  ...+.+..+|.+|+
T Consensus        22 ~~s~~t~~~L~~Ss~-~L~~~~~e~~~~~~~l~~s~~ll~~l~r~~~~D~~li~~~~~~f~   81 (92)
T PF03908_consen   22 ERSELTLQTLEESSA-TLRSTNDEYDGQSSLLKKSRKLLKKLERRDKTDRILIFFAFLFFL   81 (92)
T ss_pred             HHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            345556678899999 99999999999999999999999988744  34444555655553

>COG5074 t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion]

Probab=84.46  E-value=4  Score=32.82  Aligned_cols=69  Identities=13%  Similarity=0.093  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHH----HhcCCchhhhhcce
Q psy7549          30 LTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDI----EKIKNPNIDRGLQT   99 (104)
Q Consensus        30 ~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~----~~~~n~~~~~~l~~   99 (104)
                      .+..|...|.-|-+|..+|..+|.+|.. +.|-++.+...++..+......+.+..    .+.++.+.-.|+|+
T Consensus       186 ~ikkiEkt~ael~qLfndm~~~V~eq~e-~Vd~I~~~~~~~~~n~~~g~~h~d~AvksaRaaRkkki~c~gI~~  258 (280)
T COG5074         186 EIKKIEKTMAELTQLFNDMEELVIEQQE-NVDVIDKNVEDAQENVEQGVGHTDKAVKSARAARKKKIRCYGICF  258 (280)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHhhHhhHHhhHHHhhhhHHHHHHHHHHHHhcceehhhhHH
Confidence            4567889999999999999999999999 999999998888887777777766643    23344455557664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	104
2nps_D	82	Syntaxin-6; vesicle fusion, snare complex, early e	7e-08
1n7s_D	66	SNAP-25A; neuronal snare protein complex, four hel	4e-05
1sfc_D	87	Protein (SNAP-25B), protein (synaptobrevin 2); mem	6e-05
1gl2_D	65	Syntaxin 8, vesicle transport V-snare protein VTI1	3e-04

>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens} Length = 82

 Score = 44.8 bits (106), Expect = 7e-08
 Identities = 13/75 (17%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 7  GNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDD 66
          G++   +       + + +  ++    +   I  LK+++  IG E++ Q   +L     +
Sbjct: 1  GSHMASMTGG----NNMGRMQDEQLELVSGSIGVLKNMSQRIGGELEEQAV-MLEDFSHE 55

Query: 67 FDRTGGFLNNSMARV 81
           + T   L+N M ++
Sbjct: 56 LESTQSRLDNVMKKL 70

>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B Length = 66

 Score = 37.4 bits (87), Expect = 4e-05
 Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 20 GDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMA 79
          G A   E ++    +   I  L+ + +D+G E+  QN  + R + +  D     ++ +  
Sbjct: 1  GSARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR-IMEKADSNKTRIDEANQ 59

Query: 80 RV 81
          R 
Sbjct: 60 RA 61

>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1 Length = 87

 Score = 37.5 bits (87), Expect = 6e-05
 Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 20 GDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMA 79
           DA   E ++    +   I  L+ + +D+G E+  QN   +  + +  D     ++ +  
Sbjct: 20 NDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNR-QIDRIMEKADSNKTRIDEANQ 78

Query: 80 RV 81
          R 
Sbjct: 79 RA 80

>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1 Length = 65

 Score = 35.1 bits (81), Expect = 3e-04
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 20 GDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMA 79
          G  + +++  L   L + I   K +  +IG E+  QNE ++  + +  + T   L     
Sbjct: 1  GSHMQEQDAGL-DALSSIISRQKQMGQEIGNELDEQNE-IIDDLANLVENTDEKLRTEAR 58

Query: 80 RV 81
          RV
Sbjct: 59 RV 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	104
2nps_D	82	Syntaxin-6; vesicle fusion, snare complex, early e	99.73
1n7s_D	66	SNAP-25A; neuronal snare protein complex, four hel	99.71
1gl2_D	65	Syntaxin 8, vesicle transport V-snare protein VTI1	99.7
1sfc_D	87	Protein (SNAP-25B), protein (synaptobrevin 2); mem	99.68
1l4a_D	87	S-SNAP25 fusion protein; snare, snare complex, mem	99.51
3b5n_D	64	Protein transport protein SEC9; snare complex, syn	99.41
3hd7_B	109	Syntaxin-1A; membrane protein, coiled-coil, 4-heli	97.28
1jth_B	77	Syntaxin 1A; coiled-coil, polar layer, endocytosis	96.8
2nps_B	71	Syntaxin 13, vesicle-associated membrane protein 4	95.81
3b5n_B	69	Protein SSO1; snare complex, syntaxin, synaptobrev	95.64
1sfc_B	83	Protein (syntaxin 1A), protein (synaptobrevin 2);	95.57
1gl2_B	65	Syntaxin 7; membrane protein, membrane fusion prot	95.39
1n7s_B	68	Syntaxin 1A; neuronal snare protein complex, four	94.86
1sfc_A	96	VAMP 2, protein (synaptobrevin 2); membrane fusion	80.62

>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}

Probab=99.73  E-value=4.1e-18  Score=111.75  Aligned_cols=69  Identities=17%  Similarity=0.251  Sum_probs=60.0

Q ss_pred             chHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHHhcCCc
Q psy7549          21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIKNP   91 (104)
Q Consensus        21 ~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~~~~n~   91 (104)
                      ++|++| |+.|+.|+.+|.+||++|++||+||++||. +||+|+++||++..+|+++++|+.+++++++++
T Consensus        12 ~~~~eQ-D~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~-lLd~l~~~~d~~~~~L~~~~~r~~~~~~~~~~~   80 (82)
T 2nps_D           12 NMGRMQ-DEQLELVSGSIGVLKNMSQRIGGELEEQAV-MLEDFSHELESTQSRLDNVMKKLAKVSHMTSDR   80 (82)
T ss_dssp             -------CCTHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcC
Confidence            566666 558999999999999999999999999999 999999999999999999999999999887754

>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B

Probab=99.71  E-value=1.3e-17  Score=105.04  Aligned_cols=64  Identities=17%  Similarity=0.278  Sum_probs=61.4

Q ss_pred             chHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHH
Q psy7549          21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDI   85 (104)
Q Consensus        21 ~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~   85 (104)
                      +.+|+|+|+.++.|+.+|++||++|++||+||+.||. +||.++++||++..+|+.+++|+.++.
T Consensus         2 d~~e~eqD~~Ld~L~~~v~~lk~la~~ig~El~~Qn~-~Ld~l~~~~d~~~~~l~~~~~rl~~ll   65 (66)
T 1n7s_D            2 SARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNR-QIDRIMEKADSNKTRIDEANQRATKML   65 (66)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999 999999999999999999999999864

>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1

Probab=99.70  E-value=1.3e-17  Score=104.75  Aligned_cols=63  Identities=22%  Similarity=0.295  Sum_probs=53.0

Q ss_pred             hHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHH
Q psy7549          22 AIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIE   86 (104)
Q Consensus        22 ~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~   86 (104)
                      +|++| |+.++.|+.+|++||++|++||+||+.||. +||+|+++||++..+|+++++|+.++.+
T Consensus         3 ~~~eq-D~~Ld~L~~~v~~lk~~a~~Ig~El~~Qn~-lLd~l~~~~d~~~~~l~~~~~rl~~l~k   65 (65)
T 1gl2_D            3 HMQEQ-DAGLDALSSIISRQKQMGQEIGNELDEQNE-IIDDLANLVENTDEKLRTEARRVTLVDR   65 (65)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            45555 778999999999999999999999999999 9999999999999999999999998754

>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1

Probab=99.68  E-value=1.1e-16  Score=106.18  Aligned_cols=68  Identities=18%  Similarity=0.259  Sum_probs=63.9

Q ss_pred             cchHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHHhc
Q psy7549          20 GDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKI   88 (104)
Q Consensus        20 ~~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~~~   88 (104)
                      .+.+|+|+|+.|+.|+..|++||+++++||+||+.||. +||.|+++||++..+|..+++|+.++.++|
T Consensus        20 ~d~~e~eqD~~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~-~Ld~i~~~~D~~~~rl~~~~~rl~~ll~kg   87 (87)
T 1sfc_D           20 NDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNR-QIDRIMEKADSNKTRIDEANQRATKMLGSG   87 (87)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHHhhCC
Confidence            47889999999999999999999999999999999999 999999999999999999999999998764

>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1

Probab=99.51  E-value=2e-14  Score=95.57  Aligned_cols=65  Identities=17%  Similarity=0.307  Sum_probs=61.8

Q ss_pred             chHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHH
Q psy7549          21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIE   86 (104)
Q Consensus        21 ~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~   86 (104)
                      +.+|.|.|+.|+.|+..|++||+++.+||+||+.||. +||.+++.+|++..+|..+.+|+.++.+
T Consensus        22 d~~e~eqD~~Ld~ls~~l~rLk~mA~~mg~Eld~Qn~-~LD~i~~~~D~~~~rl~~~n~r~~kll~   86 (87)
T 1l4a_D           22 DAREDDMENNMKEVSSMIGNLRNMAIDMGNEIGSQNR-QVDRIQQKAESNESRIDEANKKATKLLK   86 (87)
T ss_dssp             SHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHTHHHHHHHHCC-
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            6788888999999999999999999999999999999 9999999999999999999999998765

>3b5n_D Protein transport protein SEC9; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae}

Probab=99.41  E-value=6.1e-13  Score=84.16  Aligned_cols=63  Identities=16%  Similarity=0.210  Sum_probs=60.1

Q ss_pred             chHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHH
Q psy7549          21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLD   84 (104)
Q Consensus        21 ~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m   84 (104)
                      +.+|.|.|+-|++|+..|++||+++.+||+||+.||. +||.+.+..|++..+|..+.+||.++
T Consensus         2 d~~E~e~D~nLd~l~~~~~rlk~ma~~mg~Eid~QN~-~ldrI~~k~d~~d~ri~~~~~Rl~~i   64 (64)
T 3b5n_D            2 SEMELEIDRNLDQIQQVSNRLKKMALTTGKELDSQQK-RLNNIEESTDDLDINLHMNTNRLAGI   64 (64)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cHHHHHHHhhHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            5689999999999999999999999999999999999 99999999999999999999999863

>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B

Probab=97.28  E-value=0.00084  Score=45.38  Aligned_cols=64  Identities=14%  Similarity=0.277  Sum_probs=58.0

Q ss_pred             cchHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHH
Q psy7549          20 GDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDI   85 (104)
Q Consensus        20 ~~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~   85 (104)
                      ...+++. ++.+..|...+.-|.++..++...|.+|.. ++|.++..++.+...+..+...+.+..
T Consensus        13 l~~i~eR-~~eI~~Ie~~I~eL~~iF~dla~lV~eQge-~Id~Ie~nv~~a~~~v~~g~~eL~kA~   76 (109)
T 3hd7_B           13 LSEIETR-HSEIIKLENSIRELHDMFMDMAMLVESQGE-MIDRIEYNVEHAVDYVERAVSDTKKAV   76 (109)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3566666 447899999999999999999999999999 999999999999999999999998864

>1jth_B Syntaxin 1A; coiled-coil, polar layer, endocytosis-exocytosis complex; 2.00A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1hvv_A* 1urq_B

Probab=96.80  E-value=0.0096  Score=37.60  Aligned_cols=65  Identities=14%  Similarity=0.279  Sum_probs=57.3

Q ss_pred             HHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHHhcC
Q psy7549          23 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIK   89 (104)
Q Consensus        23 lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~~~~   89 (104)
                      +++. .+.+..|...|.-|.+|..++..-|.+|.. +||.++..++.+...+..+...|.+..+..+
T Consensus         5 i~eR-~~ei~~ie~~i~eL~~iF~dla~lV~eQge-~id~Ie~nv~~a~~~v~~g~~~L~kA~~~q~   69 (77)
T 1jth_B            5 IETR-HSEIIKLENSIRELHDMFMDMAMLVESQGE-MIDRIEYNVEHAVDYVERAVSDTKKAVKYQS   69 (77)
T ss_dssp             HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444 447899999999999999999999999999 9999999999999999999999999776433

>2nps_B Syntaxin 13, vesicle-associated membrane protein 4; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Rattus norvegicus}

Probab=95.81  E-value=0.069  Score=33.11  Aligned_cols=58  Identities=10%  Similarity=0.204  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHH
Q psy7549          28 EQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIE   86 (104)
Q Consensus        28 D~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~   86 (104)
                      .+.+..|...|.-|.+|..++..=|.+|.. +||.++..++.+...+..+...|.+..+
T Consensus         5 ~~ei~~ie~~i~eL~~iF~dla~lV~eQge-~id~Ie~nv~~a~~~v~~g~~eL~kA~~   62 (71)
T 2nps_B            5 ETAIQQLEADILDVNQIFKDLAMMIHDQGD-LIDSIEANVESSEVHVERASDQLQRAAY   62 (71)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999 9999999999999999999999988664

>3b5n_B Protein SSO1; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1

Probab=95.64  E-value=0.12  Score=31.91  Aligned_cols=62  Identities=15%  Similarity=0.140  Sum_probs=55.9

Q ss_pred             HHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHH
Q psy7549          23 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIE   86 (104)
Q Consensus        23 lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~   86 (104)
                      +++. .+.+..|...|.-|.+|..++..=|.+|.. +||.++..++.+...+..+...|.+..+
T Consensus         5 i~eR-~~ei~~ie~~i~eL~~iF~dla~lV~eQge-~id~Ie~nv~~a~~~v~~g~~~L~kA~~   66 (69)
T 3b5n_B            5 VQAR-HQELLKLEKSMAELTQLFNDMEELVIEQQE-NVDVIDKNVEDAQLDVEQGVGHTDKAVK   66 (69)
T ss_dssp             HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444 446899999999999999999999999999 9999999999999999999999988665

>1sfc_B Protein (syntaxin 1A), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1l4a_B

Probab=95.57  E-value=0.11  Score=33.08  Aligned_cols=67  Identities=13%  Similarity=0.273  Sum_probs=59.2

Q ss_pred             chHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHHHHhcC
Q psy7549          21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDIEKIK   89 (104)
Q Consensus        21 ~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m~~~~~   89 (104)
                      ..+++. .+.+..|...|.-|.+|..++..=|.+|.. +||.++..++.+...+..+...|.+..+..+
T Consensus        14 ~~i~eR-~~ei~~ie~~i~eL~~iF~dla~lV~eQge-~id~Ie~nv~~a~~~v~~g~~eL~kA~~~qk   80 (83)
T 1sfc_B           14 SEIETR-HSEIIKLENSIRELHDMFMDMAMLVESQGE-MIDRIEYNVEHAVDYVERAVSDTKKAVKYQS   80 (83)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            455555 447899999999999999999999999999 9999999999999999999999998776443

>1gl2_B Syntaxin 7; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Mus musculus} SCOP: h.1.15.1

Probab=95.39  E-value=0.074  Score=32.53  Aligned_cols=60  Identities=12%  Similarity=0.295  Sum_probs=52.8

Q ss_pred             HHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHH
Q psy7549          23 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLD   84 (104)
Q Consensus        23 lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m   84 (104)
                      +++. .+.+..|...|.-|.+|..++..=|.+|.. +||.++..++.+...+..+...|.+.
T Consensus         4 i~eR-~~~i~~ie~~i~eL~~iF~dla~lV~eQge-~id~Ie~nv~~a~~~v~~g~~eL~kA   63 (65)
T 1gl2_B            4 MHER-ESSIRQLEADIMDINEIFKDLGMMIHEQGD-VIDSIEANVESAEVHVQQANQQLSRA   63 (65)
T ss_dssp             -CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444 346799999999999999999999999999 99999999999999999998887663

>1n7s_B Syntaxin 1A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_B 3rk3_B 3rl0_B 1kil_B

Probab=94.86  E-value=0.16  Score=31.12  Aligned_cols=62  Identities=15%  Similarity=0.292  Sum_probs=54.8

Q ss_pred             chHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHHH
Q psy7549          21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLD   84 (104)
Q Consensus        21 ~~lE~qND~~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~m   84 (104)
                      ..+++. .+.+..|...|.-|.+|..++..=|.+|.. +||.++..++.+...+..+...|.+.
T Consensus         5 ~~i~eR-~~ei~~Ie~~i~eL~~iF~dla~lV~eQge-~id~Ie~nv~~a~~~v~~g~~~L~kA   66 (68)
T 1n7s_B            5 SEIETR-HSEIIKLENSIRELHDMFMDMAMLVESQGE-MIDRIEYNVEHAVDYVERAVSDTKKA   66 (68)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345555 447899999999999999999999999999 99999999999999999998888764

>1sfc_A VAMP 2, protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1

Probab=80.62  E-value=7.8  Score=25.22  Aligned_cols=35  Identities=11%  Similarity=0.123  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhH
Q psy7549          30 LTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDD   65 (104)
Q Consensus        30 ~ld~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~   65 (104)
                      .+..+...|.-.|.|-..=-+.|-+-.+ =||.|.+
T Consensus        31 ~l~~vq~eldeVk~IM~~NI~kvLeRGE-kLd~L~d   65 (96)
T 1sfc_A           31 RLQQTQAQVDEVVDIMRVNVDKVLERDQ-KLSELDD   65 (96)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHH
Confidence            5566777777776655544444444444 3555544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00