Psyllid ID: psy75

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Protein Sequence
MRAIFRLVLSSTPDHHHKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRARKQ
Secondary Structure (PSIPRED)
ccEEEEEEEEEcccccEEEcccccccccccccccccccccccccccccccccEEEEEEEEEccccEEEEEEcccccEEEEcccEEEEcccccEEEEEEEccccEEEcHHHcHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEccccHHHHHHHHHHHcccccccccHHHHHcccccccccccccEEEEEEEcccccccEEEEEcccccEEEEccccEEcccccccccEEEcccccEcHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MRAIFRLVlsstpdhhhkqNAQLrkknvapgmggleehlrnpsstdlfgQADAVVKHVLEGhdrgvnwacfhptlplivsgkglclldhgpnlfpvvldssdffvpIAKLEKREGRARKQ
Flexible Loop (DISEMBL)
MRAIFRLvlsstpdhhhkqnaqlrkkNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAklekregrarkq
Low Complexity Region (SEG)
MRAIFRLVLSSTPDHHHKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRARKQ
Disordered region (IsUnstruct)
**********************************************LFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAK***********
Disordered Region (DISOPRED)
MRAIFRLVLSSTPDHHHKQNAQLR*************************QADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAK***********
Disordered Region (DISEMBL)
MRAIFRLVLSSTP************KNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE*********
Disordered Region (DISPRO)
*RAIFRLVLSSTPDHHHKQNAQLRKK*******************DLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKRE******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRAIFRLVLSSTPDHHHKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRARKQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	120	2.2.26 [Sep-21-2011]
Q27954	1224	Coatomer subunit alpha OS	yes	N/A	0.475	0.046	0.694	3e-18
P53621	1224	Coatomer subunit alpha OS	yes	N/A	0.475	0.046	0.694	3e-18
Q8CIE6	1224	Coatomer subunit alpha OS	yes	N/A	0.608	0.059	0.584	2e-17
Q96WV5	1207	Putative coatomer subunit	yes	N/A	0.491	0.048	0.629	3e-15
Q9AUR7	1218	Coatomer subunit alpha-2	yes	N/A	0.591	0.058	0.576	5e-15
Q0J3D9	1218	Coatomer subunit alpha-3	yes	N/A	0.591	0.058	0.576	7e-15
Q9AUR8	1218	Coatomer subunit alpha-1	yes	N/A	0.591	0.058	0.576	7e-15
Q94A40	1216	Coatomer subunit alpha-1	yes	N/A	0.591	0.058	0.538	3e-14
Q9SJT9	1218	Coatomer subunit alpha-2	no	N/A	0.458	0.045	0.6	7e-14
P53622	1201	Coatomer subunit alpha OS	yes	N/A	0.491	0.049	0.559	3e-12

>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/59 (69%), Positives = 47/59 (79%), Gaps = 2/59 (3%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDRGVNWA FHPT+PLIVSG
Sbjct: 167 LRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG 223

Xenin stimulates exocrine pancreatic secretion. It inhibits pentagastrin-stimulated secretion of acid, to induce exocrine pancreatic secretion and to affect small and large intestinal motility. In the gut, xenin interacts with the neurotensin receptor.
Bos taurus (taxid: 9913)

>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/59 (69%), Positives = 47/59 (79%), Gaps = 2/59 (3%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDRGVNWA FHPT+PLIVSG
Sbjct: 167 LRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG 223

Xenin stimulates exocrine pancreatic secretion. It inhibits pentagastrin-stimulated secretion of acid, to induce exocrine pancreatic secretion and to affect small and large intestinal motility. In the gut, xenin interacts with the neurotensin receptor.

Homo sapiens (taxid: 9606)

>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 4/77 (5%)

Query: 7   LVLSSTPDHHHK--QNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDR 64
           LV+S++ D   +    + LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDR
Sbjct: 149 LVVSASLDQTVRVWDISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDR 206

Query: 65  GVNWACFHPTLPLIVSG 81
           GVNWA FHPT+PLIVSG
Sbjct: 207 GVNWAAFHPTMPLIVSG 223

Xenin stimulates exocrine pancreatic secretion. It inhibits pentagastrin-stimulated secretion of acid, to induce exocrine pancreatic secretion and to affect small and large intestinal motility. In the gut, xenin interacts with the neurotensin receptor.

Mus musculus (taxid: 10090)

>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 42/62 (67%), Gaps = 3/62 (4%)

Query: 23  LRKKNVAPGMGGLEEHL---RNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIV 79
           LR KN AP    LE+ L    N  S DLFG  DA+VK VLEGHDRGVNW  FHPTLPLI+
Sbjct: 169 LRMKNAAPVSMSLEDQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPTLPLIL 228

Query: 80  SG 81
           S 
Sbjct: 229 SA 230

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica GN=Os03g0711500 PE=2 SV=1

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 7/78 (8%)

Query: 7   LVLSSTPDHHHK--QNAQLRKKNVAPGMGGLEEHLR-NPSSTDLFGQADAVVKHVLEGHD 63
           LV+S++ D   +    + LRKK+V+P     ++ LR    +TDLFG  DAVVK+VLEGHD
Sbjct: 149 LVVSASLDQTVRVWDISALRKKSVSPA----DDILRLTQMNTDLFGGVDAVVKYVLEGHD 204

Query: 64  RGVNWACFHPTLPLIVSG 81
           RGVNWA FHPTLPLIVSG
Sbjct: 205 RGVNWASFHPTLPLIVSG 222

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica GN=Os09g0127800 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 7/78 (8%)

Query: 7   LVLSSTPDHHHK--QNAQLRKKNVAPGMGGLEEHLR-NPSSTDLFGQADAVVKHVLEGHD 63
           LV+S++ D   +      LRKK V+P     ++ LR    +TDLFG  DAVVK+VLEGHD
Sbjct: 149 LVVSASLDQTVRVWDIGALRKKTVSPA----DDILRLTQMNTDLFGGVDAVVKYVLEGHD 204

Query: 64  RGVNWACFHPTLPLIVSG 81
           RGVNWA FHPTLPLIVSG
Sbjct: 205 RGVNWASFHPTLPLIVSG 222

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica GN=Os03g0711400 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 7/78 (8%)

Query: 7   LVLSSTPDHHHK--QNAQLRKKNVAPGMGGLEEHLR-NPSSTDLFGQADAVVKHVLEGHD 63
           LV+S++ D   +      LRKK V+P     ++ LR    +TDLFG  DAVVK+VLEGHD
Sbjct: 149 LVVSASLDQTVRVWDIGALRKKTVSPA----DDILRLTQMNTDLFGGVDAVVKYVLEGHD 204

Query: 64  RGVNWACFHPTLPLIVSG 81
           RGVNWA FHPTLPLIVSG
Sbjct: 205 RGVNWASFHPTLPLIVSG 222

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1 SV=2

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 7/78 (8%)

Query: 7   LVLSSTPDHHHK--QNAQLRKKNVAPGMGGLEEHLR-NPSSTDLFGQADAVVKHVLEGHD 63
           LV+S++ D   +      LRKK V+P     ++ +R    ++DLFG  DA+VK+VLEGHD
Sbjct: 149 LVVSASLDQTVRVWDIGALRKKTVSPA----DDIMRLTQMNSDLFGGVDAIVKYVLEGHD 204

Query: 64  RGVNWACFHPTLPLIVSG 81
           RGVNWA FHPTLPLIVSG
Sbjct: 205 RGVNWAAFHPTLPLIVSG 222

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/60 (60%), Positives = 47/60 (78%), Gaps = 5/60 (8%)

Query: 23  LRKKNVAPGMGGLEEHLR-NPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           L+KK+ +P     ++ +R +  ++DLFG  DA+VK+VLEGHDRGVNWA FHPTLPLIVSG
Sbjct: 167 LKKKSASPA----DDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSG 222

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COP1 PE=1 SV=2

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/59 (55%), Positives = 38/59 (64%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRK++ APG    EE +    +       D VVK +LEGH RGVNWA FHPTLPLIVSG
Sbjct: 169 LRKRHSAPGTSSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSG 227

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
66504662	1214	PREDICTED: coatomer subunit alpha isofor	0.491	0.048	0.915	5e-27
91094941	1220	PREDICTED: similar to coatomer [Triboliu	0.491	0.048	0.932	6e-27
345488489	1146	PREDICTED: coatomer subunit alpha-like [	0.491	0.051	0.898	2e-26
380014926	1214	PREDICTED: LOW QUALITY PROTEIN: coatomer	0.491	0.048	0.898	2e-26
242015300	1222	coatomer alpha subunit, putative [Pedicu	0.491	0.048	0.881	6e-26
383850572	1214	PREDICTED: coatomer subunit alpha [Megac	0.491	0.048	0.881	3e-25
332026185	1209	Coatomer subunit alpha [Acromyrmex echin	0.491	0.048	0.881	3e-25
350406181	435	PREDICTED: coatomer subunit alpha-like,	0.491	0.135	0.847	3e-25
322780808	1209	hypothetical protein SINV_04529 [Solenop	0.491	0.048	0.881	4e-25
307188017	1208	Coatomer subunit alpha [Camponotus flori	0.491	0.048	0.881	4e-25

>gi|66504662|ref|XP_623198.1| PREDICTED: coatomer subunit alpha isoform 1 [Apis mellifera]

 Score =  125 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKNVAPG GGLE+HL+NP +TDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG
Sbjct: 167 LRKKNVAPGPGGLEDHLKNPGTTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 225

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91094941|ref|XP_967472.1| PREDICTED: similar to coatomer [Tribolium castaneum] gi|270016760|gb|EFA13206.1| hypothetical protein TcasGA2_TC016033 [Tribolium castaneum]

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/59 (93%), Positives = 57/59 (96%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKNVAPG GGLE+HL+NP STDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG
Sbjct: 167 LRKKNVAPGPGGLEDHLKNPGSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 225

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345488489|ref|XP_001601104.2| PREDICTED: coatomer subunit alpha-like [Nasonia vitripennis]

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/59 (89%), Positives = 56/59 (94%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKNVAPG  GL++HL+NP STDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG
Sbjct: 167 LRKKNVAPGPSGLDDHLKNPGSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 225

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014926|ref|XP_003691465.1| PREDICTED: LOW QUALITY PROTEIN: coatomer subunit alpha-like [Apis florea]

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/59 (89%), Positives = 56/59 (94%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKNVAPG GGLE+HL+NP +TDLFGQADAVVKHVL GHDRGVNWACFHPTLPLIVSG
Sbjct: 167 LRKKNVAPGPGGLEDHLKNPGTTDLFGQADAVVKHVLXGHDRGVNWACFHPTLPLIVSG 225

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242015300|ref|XP_002428302.1| coatomer alpha subunit, putative [Pediculus humanus corporis] gi|212512887|gb|EEB15564.1| coatomer alpha subunit, putative [Pediculus humanus corporis]

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/59 (88%), Positives = 55/59 (93%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKNVAPG GGLEEHLRNP +TDLFGQ DAVVKHVLEGH+RGVNW CFHPT+PLIVSG
Sbjct: 167 LRKKNVAPGPGGLEEHLRNPGTTDLFGQVDAVVKHVLEGHERGVNWTCFHPTMPLIVSG 225

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850572|ref|XP_003700869.1| PREDICTED: coatomer subunit alpha [Megachile rotundata]

 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/59 (88%), Positives = 55/59 (93%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKNVAPG GGLE+HL+NP +TDLFGQADAVVKHVLEGHDRGVNWA FHPTLPLI SG
Sbjct: 167 LRKKNVAPGPGGLEDHLKNPGATDLFGQADAVVKHVLEGHDRGVNWASFHPTLPLIASG 225

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332026185|gb|EGI66327.1| Coatomer subunit alpha [Acromyrmex echinatior]

 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/59 (88%), Positives = 56/59 (94%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKNVAPG GGLE+HL+NP +TDLFGQADAVVK+VLEGHDRGVNWACFH TLPLIVSG
Sbjct: 167 LRKKNVAPGPGGLEDHLKNPGATDLFGQADAVVKYVLEGHDRGVNWACFHGTLPLIVSG 225

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406181|ref|XP_003487682.1| PREDICTED: coatomer subunit alpha-like, partial [Bombus impatiens]

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/59 (84%), Positives = 56/59 (94%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKNVAPG GGLE+HL+NP +TDLFGQADAVV+H+L+ HDRGVNWACFHPTLPLIVSG
Sbjct: 167 LRKKNVAPGPGGLEDHLKNPGATDLFGQADAVVRHILDAHDRGVNWACFHPTLPLIVSG 225

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322780808|gb|EFZ10037.1| hypothetical protein SINV_04529 [Solenopsis invicta]

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/59 (88%), Positives = 56/59 (94%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKNVAPG GGLE+HL+NP +TDLFGQADAVVK+VLEGHDRGVNWACFH TLPLIVSG
Sbjct: 167 LRKKNVAPGPGGLEDHLKNPGATDLFGQADAVVKYVLEGHDRGVNWACFHGTLPLIVSG 225

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307188017|gb|EFN72866.1| Coatomer subunit alpha [Camponotus floridanus]

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/59 (88%), Positives = 56/59 (94%)

Query: 23  LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
           LRKKNVAPG GGLE+HL+NP +TDLFGQADAVVK+VLEGHDRGVNWACFH TLPLIVSG
Sbjct: 167 LRKKNVAPGPGGLEDHLKNPGATDLFGQADAVVKYVLEGHDRGVNWACFHGTLPLIVSG 225

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
FB|FBgn0025725	1234	alphaCop "alpha-coatomer prote	0.491	0.047	0.833	9.8e-22
UNIPROTKB|H9L3L2	1134	LOC100859596 "Uncharacterized	0.475	0.050	0.694	2.4e-16
UNIPROTKB|H9KZL3	1169	LOC100859596 "Uncharacterized	0.475	0.048	0.694	2.5e-16
UNIPROTKB|F1PU93	1214	COPA "Coatomer subunit alpha"	0.475	0.046	0.694	2.6e-16
UNIPROTKB|Q27954	1224	COPA "Coatomer subunit alpha"	0.475	0.046	0.694	2.7e-16
UNIPROTKB|P53621	1224	COPA "Coatomer subunit alpha"	0.475	0.046	0.694	2.7e-16
UNIPROTKB|F1RJX8	1224	COPA "Uncharacterized protein"	0.475	0.046	0.694	2.7e-16
MGI|MGI:1334462	1224	Copa "coatomer protein complex	0.475	0.046	0.694	2.7e-16
UNIPROTKB|G3V6T1	1224	Copa "Protein Copa" [Rattus no	0.475	0.046	0.694	2.7e-16
ZFIN|ZDB-GENE-020905-2	1226	copa "coatomer protein complex	0.475	0.046	0.666	5.1e-15

FB|FBgn0025725 alphaCop "alpha-coatomer protein" [Drosophila melanogaster (taxid:7227)]

 Score = 267 (99.0 bits), Expect = 9.8e-22, P = 9.8e-22
 Identities = 50/60 (83%), Positives = 55/60 (91%)

Query:    23 LRKKNVAPGMGGLEEHLR-NPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
             LRKKNVAPG GGL++HL+ +P +TDLFGQADAVVKHVLEGHDRG NWA FHPTLPLIVSG
Sbjct:   167 LRKKNVAPGPGGLDDHLKGHPGATDLFGQADAVVKHVLEGHDRGFNWASFHPTLPLIVSG 226

GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER" evidence=ISS;NAS

GO:0030126 "COPI vesicle coat" evidence=ISS;NAS

GO:0016192 "vesicle-mediated transport" evidence=NAS

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0010883 "regulation of lipid storage" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=IMP

UNIPROTKB|H9L3L2 LOC100859596 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 216 (81.1 bits), Expect = 2.4e-16, P = 2.4e-16
 Identities = 41/59 (69%), Positives = 47/59 (79%)

Query:    23 LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
             LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDRGVNWA FHPT+PLIVSG
Sbjct:   167 LRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG 223

GO:0005198 "structural molecule activity" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0030126 "COPI vesicle coat" evidence=IEA

UNIPROTKB|H9KZL3 LOC100859596 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 216 (81.1 bits), Expect = 2.5e-16, P = 2.5e-16
 Identities = 41/59 (69%), Positives = 47/59 (79%)

Query:    23 LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
             LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDRGVNWA FHPT+PLIVSG
Sbjct:   167 LRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG 223

GO:0005198 "structural molecule activity" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0030126 "COPI vesicle coat" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0030157 "pancreatic juice secretion" evidence=IEA

UNIPROTKB|F1PU93 COPA "Coatomer subunit alpha" [Canis lupus familiaris (taxid:9615)]

 Score = 216 (81.1 bits), Expect = 2.6e-16, P = 2.6e-16
 Identities = 41/59 (69%), Positives = 47/59 (79%)

Query:    23 LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
             LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDRGVNWA FHPT+PLIVSG
Sbjct:   157 LRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG 213

GO:0030126 "COPI vesicle coat" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

UNIPROTKB|Q27954 COPA "Coatomer subunit alpha" [Bos taurus (taxid:9913)]

 Score = 216 (81.1 bits), Expect = 2.7e-16, P = 2.7e-16
 Identities = 41/59 (69%), Positives = 47/59 (79%)

Query:    23 LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
             LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDRGVNWA FHPT+PLIVSG
Sbjct:   167 LRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG 223

GO:0005515 "protein binding" evidence=IPI

GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS

GO:0030126 "COPI vesicle coat" evidence=IDA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=TAS

GO:0030157 "pancreatic juice secretion" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0005179 "hormone activity" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

UNIPROTKB|P53621 COPA "Coatomer subunit alpha" [Homo sapiens (taxid:9606)]

 Score = 216 (81.1 bits), Expect = 2.7e-16, P = 2.7e-16
 Identities = 41/59 (69%), Positives = 47/59 (79%)

Query:    23 LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
             LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDRGVNWA FHPT+PLIVSG
Sbjct:   167 LRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG 223

GO:0005198 "structural molecule activity" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005179 "hormone activity" evidence=IEA

GO:0030126 "COPI vesicle coat" evidence=ISS;IDA

GO:0005615 "extracellular space" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0030157 "pancreatic juice secretion" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS

GO:0016044 "cellular membrane organization" evidence=TAS

GO:0048205 "COPI coating of Golgi vesicle" evidence=TAS

UNIPROTKB|F1RJX8 COPA "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 216 (81.1 bits), Expect = 2.7e-16, P = 2.7e-16
 Identities = 41/59 (69%), Positives = 47/59 (79%)

Query:    23 LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
             LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDRGVNWA FHPT+PLIVSG
Sbjct:   167 LRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG 223

GO:0030157 "pancreatic juice secretion" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0030126 "COPI vesicle coat" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

MGI|MGI:1334462 Copa "coatomer protein complex subunit alpha" [Mus musculus (taxid:10090)]

 Score = 216 (81.1 bits), Expect = 2.7e-16, P = 2.7e-16
 Identities = 41/59 (69%), Positives = 47/59 (79%)

Query:    23 LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
             LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDRGVNWA FHPT+PLIVSG
Sbjct:   167 LRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG 223

GO:0005179 "hormone activity" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005615 "extracellular space" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0030117 "membrane coat" evidence=IEA

GO:0030126 "COPI vesicle coat" evidence=ISO

GO:0030157 "pancreatic juice secretion" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IEA

UNIPROTKB|G3V6T1 Copa "Protein Copa" [Rattus norvegicus (taxid:10116)]

 Score = 216 (81.1 bits), Expect = 2.7e-16, P = 2.7e-16
 Identities = 41/59 (69%), Positives = 47/59 (79%)

Query:    23 LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
             LRKKN++PG   +E  +R  +  DLFG  DAVVKHVLEGHDRGVNWA FHPT+PLIVSG
Sbjct:   167 LRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG 223

GO:0005198 "structural molecule activity" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0030126 "COPI vesicle coat" evidence=IEA

GO:0030157 "pancreatic juice secretion" evidence=IEA

ZFIN|ZDB-GENE-020905-2 copa "coatomer protein complex, subunit alpha" [Danio rerio (taxid:7955)]

 Score = 204 (76.9 bits), Expect = 5.1e-15, P = 5.1e-15
 Identities = 40/60 (66%), Positives = 48/60 (80%)

Query:    23 LRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLE-GHDRGVNWACFHPTLPLIVSG 81
             LRKKN++PG   ++  +R  S  DLFG +DAVVKHVLE GHDRGVNWA FHP++PLIVSG
Sbjct:   167 LRKKNLSPG--AVDTEVRGISGVDLFGASDAVVKHVLEQGHDRGVNWAAFHPSMPLIVSG 224

GO:0030117 "membrane coat" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0030126 "COPI vesicle coat" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0030903 "notochord development" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9AUR8	COPA1_ORYSJ	No assigned EC number	0.5769	0.5916	0.0582	yes	N/A
Q0J3D9	COPA3_ORYSJ	No assigned EC number	0.5769	0.5916	0.0582	yes	N/A
Q96WV5	COPA_SCHPO	No assigned EC number	0.6290	0.4916	0.0488	yes	N/A
Q8CIE6	COPA_MOUSE	No assigned EC number	0.5844	0.6083	0.0596	yes	N/A
P53621	COPA_HUMAN	No assigned EC number	0.6949	0.475	0.0465	yes	N/A
Q94A40	COPA1_ARATH	No assigned EC number	0.5384	0.5916	0.0583	yes	N/A
Q9AUR7	COPA2_ORYSJ	No assigned EC number	0.5769	0.5916	0.0582	yes	N/A
P53622	COPA_YEAST	No assigned EC number	0.5593	0.4916	0.0491	yes	N/A
Q27954	COPA_BOVIN	No assigned EC number	0.6949	0.475	0.0465	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	120
KOG0272|consensus	459		99.54
KOG0286|consensus	343		99.52
KOG0272|consensus	459		99.51
KOG0263|consensus	707		99.48
KOG0264|consensus	422		99.45
KOG0319|consensus	775		99.45
KOG0276|consensus	794		99.44
KOG0279|consensus	315		99.44
KOG0319|consensus	775		99.41
KOG0279|consensus	315		99.41
KOG0271|consensus	480		99.39
KOG0292|consensus	1202		99.38
KOG0645|consensus	312		99.37
KOG0645|consensus	312		99.37
KOG0291|consensus	893		99.34
KOG0286|consensus	343		99.33
KOG0263|consensus	707		99.33
KOG0281|consensus	499		99.32
KOG0276|consensus	794		99.32
KOG0316|consensus	307		99.29
PTZ00421	493	coronin; Provisional	99.27
KOG0284|consensus	464		99.27
KOG0266|consensus	456		99.27
KOG0266|consensus	456		99.25
KOG0271|consensus	480		99.25
KOG0273|consensus	524		99.24
KOG0285|consensus	460		99.24
KOG0281|consensus	499		99.23
KOG0313|consensus	423		99.23
KOG0295|consensus	406		99.21
KOG0300|consensus	481		99.21
KOG0273|consensus	524		99.21
KOG0274|consensus	537		99.19
KOG4283|consensus	397		99.14
KOG0269|consensus	839		99.12
KOG0315|consensus	311		99.1
KOG0277|consensus	311		99.1
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.09
KOG0275|consensus	508		99.08
KOG0301|consensus	745		99.05
PTZ00420	568	coronin; Provisional	99.04
KOG0284|consensus	464		99.02
KOG1332|consensus	299		99.02
KOG0274|consensus	537		99.01
KOG0270|consensus	463		98.97
KOG0277|consensus	311		98.96
KOG0285|consensus	460		98.95
KOG0278|consensus	334		98.95
KOG0265|consensus	338		98.93
KOG1332|consensus	299		98.92
KOG0772|consensus	641		98.92
KOG0647|consensus	347		98.91
KOG0283|consensus	712		98.89
KOG0294|consensus	362		98.89
KOG0308|consensus	735		98.88
KOG0293|consensus	519		98.88
KOG0315|consensus	311		98.88
KOG0313|consensus	423		98.87
KOG0302|consensus	440		98.86
KOG0264|consensus	422		98.86
KOG0292|consensus	1202		98.84
KOG2096|consensus	420		98.83
KOG0295|consensus	406		98.83
KOG0303|consensus	472		98.83
KOG0265|consensus	338		98.82
KOG0318|consensus	603		98.82
KOG1034|consensus	385		98.81
PLN00181	793	protein SPA1-RELATED; Provisional	98.81
KOG0305|consensus	484		98.76
KOG0267|consensus	825		98.74
KOG0643|consensus	327		98.74
KOG1036|consensus	323		98.73
KOG0289|consensus	506		98.73
KOG0306|consensus	888		98.73
PLN00181	793	protein SPA1-RELATED; Provisional	98.71
KOG0282|consensus	503		98.68
KOG0275|consensus	508		98.67
KOG0973|consensus	942		98.66
KOG0642|consensus	577		98.66
KOG1407|consensus	313		98.65
KOG0268|consensus	433		98.61
KOG0646|consensus	476		98.59
KOG0302|consensus	440		98.57
KOG0300|consensus	481		98.56
KOG0772|consensus	641		98.56
KOG1446|consensus	311		98.56
KOG0640|consensus	430		98.56
PTZ00421	493	coronin; Provisional	98.56
KOG0305|consensus	484		98.55
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	98.55
KOG0973|consensus	942		98.54
KOG0269|consensus	839		98.54
KOG0268|consensus	433		98.53
KOG0301|consensus	745		98.53
KOG0296|consensus	399		98.52
KOG0283|consensus	712		98.51
KOG0290|consensus	364		98.51
KOG0296|consensus	399		98.5
KOG1445|consensus	1012		98.5
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	98.49
KOG2445|consensus	361		98.47
KOG0293|consensus	519		98.46
KOG0310|consensus	487		98.46
KOG1539|consensus	910		98.46
KOG0306|consensus	888		98.45
KOG0282|consensus	503		98.44
KOG1445|consensus	1012		98.44
KOG0270|consensus	463		98.44
KOG0308|consensus	735		98.42
KOG0316|consensus	307		98.42
KOG1036|consensus	323		98.42
KOG1273|consensus	405		98.39
KOG0318|consensus	603		98.39
KOG1009|consensus	434		98.36
KOG0291|consensus	893		98.35
KOG0322|consensus	323		98.35
PTZ00420	568	coronin; Provisional	98.34
KOG0647|consensus	347		98.34
KOG0641|consensus	350		98.29
KOG4328|consensus	498		98.26
KOG0643|consensus	327		98.25
KOG0639|consensus	705		98.24
KOG1007|consensus	370		98.23
KOG0641|consensus	350		98.21
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.21
KOG0299|consensus	479		98.19
KOG0644|consensus	1113		98.18
KOG1063|consensus	764		98.17
KOG0267|consensus	825		98.17
KOG0639|consensus	705		98.15
KOG0310|consensus	487		98.13
KOG1188|consensus	376		98.12
KOG4328|consensus	498		98.1
KOG2096|consensus	420		98.09
KOG0322|consensus	323		98.06
KOG0289|consensus	506		98.05
KOG4378|consensus	673		98.04
KOG0307|consensus	1049		98.04
KOG0650|consensus	733		98.03
KOG1274|consensus	933		98.01
KOG1407|consensus	313		97.98
KOG1446|consensus	311		97.96
KOG2048|consensus	691		97.94
KOG0288|consensus	459		97.93
KOG0288|consensus	459		97.93
KOG0321|consensus	720		97.89
KOG0299|consensus	479		97.89
KOG0646|consensus	476		97.86
KOG1034|consensus	385		97.85
KOG2445|consensus	361		97.85
KOG0640|consensus	430		97.83
KOG0290|consensus	364		97.83
KOG0303|consensus	472		97.81
KOG1538|consensus	1081		97.8
KOG1272|consensus	545		97.78
KOG1310|consensus	758		97.74
KOG1274|consensus	933		97.73
KOG4283|consensus	397		97.67
KOG2919|consensus	406		97.67
KOG4227|consensus	609		97.66
KOG0278|consensus	334		97.63
KOG1524|consensus	737		97.6
KOG1007|consensus	370		97.59
KOG0974|consensus	967		97.55
KOG0294|consensus	362		97.53
KOG1063|consensus	764		97.48
KOG1009|consensus	434		97.48
KOG2110|consensus	391		97.48
KOG0650|consensus	733		97.42
KOG1539|consensus	910		97.41
KOG1408|consensus	1080		97.4
KOG0649|consensus	325		97.36
KOG1408|consensus	1080		97.24
KOG2111|consensus	346		97.23
KOG1523|consensus	361		97.22
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	97.21
KOG1310|consensus	758		97.19
KOG0642|consensus	577		97.18
KOG2106|consensus	626		97.15
KOG0307|consensus	1049		97.13
KOG0771|consensus	398		97.13
KOG0644|consensus	1113		97.1
KOG0974|consensus	967		97.09
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	97.07
KOG2106|consensus	626		97.07
KOG0321|consensus	720		97.01
COG2319	466	FOG: WD40 repeat [General function prediction only	96.96
KOG0280|consensus	339		96.96
KOG2055|consensus	514		96.94
KOG4378|consensus	673		96.92
KOG1334|consensus	559		96.79
KOG1587|consensus	555		96.76
KOG2394|consensus	636		96.76
KOG1240|consensus	1431		96.58
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	96.57
KOG4227|consensus	609		96.37
KOG4714|consensus	319		96.35
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.35
KOG2919|consensus	406		96.28
KOG3881|consensus	412		96.27
KOG1524|consensus	737		96.26
KOG2110|consensus	391		96.22
COG2319	466	FOG: WD40 repeat [General function prediction only	96.17
KOG2048|consensus	691		96.09
KOG1188|consensus	376		95.99
KOG1517|consensus	1387		95.92
KOG1273|consensus	405		95.74
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	95.71
KOG0771|consensus	398		95.48
KOG1538|consensus	1081		95.42
KOG4190|consensus	1034		95.4
KOG4714|consensus	319		95.36
KOG3914|consensus	390		94.88
KOG1334|consensus	559		94.76
PRK01742	429	tolB translocation protein TolB; Provisional	94.75
KOG1409|consensus	404		94.66
KOG1963|consensus	792		94.46
KOG1240|consensus	1431		94.25
KOG4547|consensus	541		94.21
KOG0309|consensus	1081		94.07
KOG2111|consensus	346		94.04
KOG2394|consensus	636		93.95
KOG2055|consensus	514		93.71
KOG1587|consensus	555		93.47
KOG1523|consensus	361		93.18
KOG1517|consensus	1387		93.18
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	93.13
KOG2139|consensus	445		93.07
KOG1064|consensus	2439		92.85
KOG3914|consensus	390		92.39
KOG1409|consensus	404		92.19
KOG0309|consensus	1081		92.18
PRK02889	427	tolB translocation protein TolB; Provisional	91.87
KOG4640|consensus	665		91.57
KOG2321|consensus	703		91.44
KOG4532|consensus	344		90.47
KOG0649|consensus	325		90.18
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	89.96
KOG2315|consensus	566		89.95
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	89.85
KOG1963|consensus	792		89.51
KOG2041|consensus	1189		89.41
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	88.21
KOG0280|consensus	339		88.17
PRK01742	429	tolB translocation protein TolB; Provisional	87.95
KOG1354|consensus	433		87.89
KOG2321|consensus	703		87.74
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	87.68
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	87.44
KOG2695|consensus	425		87.28
PRK11028	330	6-phosphogluconolactonase; Provisional	86.8
KOG4547|consensus	541		86.77
PRK05137	435	tolB translocation protein TolB; Provisional	86.75
KOG1645|consensus	463		86.22
KOG4190|consensus	1034		84.61
PRK04922	433	tolB translocation protein TolB; Provisional	84.37
KOG2139|consensus	445		83.99
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	83.75
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	81.99
PRK03629	429	tolB translocation protein TolB; Provisional	81.94
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	80.2

>KOG0272|consensus

Probab=99.54  E-value=1.3e-14  Score=112.73  Aligned_cols=100  Identities=14%  Similarity=0.050  Sum_probs=77.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCC----------eeEEecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADA----------VVKHVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~----------~v~~~l~gH~~   64 (120)
                      |++|+|+|.|.|  +||+.+.....      -.++|+.+|.++.+        +|+.|.          .....|.||..
T Consensus       273 G~~L~TasfD~tWRlWD~~tk~ElL------~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k  346 (459)
T KOG0272|consen  273 GKFLGTASFDSTWRLWDLETKSELL------LQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIK  346 (459)
T ss_pred             CceeeecccccchhhcccccchhhH------hhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEeccccc
Confidence            689999999999  99998644322      25688888877543        344442          23478899999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhhc
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRARK  119 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (120)
                      .|.+|+|+|+|..|||||.|+++|        +||.|-. .++-++-.|...+++
T Consensus       347 ~I~~V~fsPNGy~lATgs~Dnt~k--------VWDLR~r-~~ly~ipAH~nlVS~  392 (459)
T KOG0272|consen  347 EILSVAFSPNGYHLATGSSDNTCK--------VWDLRMR-SELYTIPAHSNLVSQ  392 (459)
T ss_pred             ceeeEeECCCceEEeecCCCCcEE--------Eeeeccc-ccceecccccchhhh
Confidence            999999999999999999999999        7887763 337777777766654

>KOG0286|consensus

Probab=99.52  E-value=3.5e-14  Score=106.54  Aligned_cols=91  Identities=16%  Similarity=0.160  Sum_probs=72.5

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec---------cCC----------CeeEEecccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG---------QAD----------AVVKHVLEGHDR   64 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~---------~~D----------~~v~~~l~gH~~   64 (120)
                      +.|+++|.|.|  +||++++....      .|.+|...|-++.+.+         +.|          +.++++|.||..
T Consensus       157 ~~ilT~SGD~TCalWDie~g~~~~------~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghes  230 (343)
T KOG0286|consen  157 NHILTGSGDMTCALWDIETGQQTQ------VFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHES  230 (343)
T ss_pred             CceEecCCCceEEEEEcccceEEE------EecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccccc
Confidence            47899999999  99999876543      5778887776654433         333          445699999999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhh
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~  111 (120)
                      .||+|.|+|+|.-|+|||+|++++        +||.|- ...++.++
T Consensus       231 DINsv~ffP~G~afatGSDD~tcR--------lyDlRa-D~~~a~ys  268 (343)
T KOG0286|consen  231 DINSVRFFPSGDAFATGSDDATCR--------LYDLRA-DQELAVYS  268 (343)
T ss_pred             ccceEEEccCCCeeeecCCCceeE--------EEeecC-CcEEeeec
Confidence            999999999999999999999999        888776 34466665

>KOG0272|consensus

Probab=99.51  E-value=3.7e-14  Score=110.23  Aligned_cols=99  Identities=17%  Similarity=0.119  Sum_probs=83.9

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------Eeccccc
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLEGHD   63 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~gH~   63 (120)
                      =|.+++|||.|..  +||+.++++..      .|.+|...|.++.+        .++.|.+++          +++.+|.
T Consensus       314 DGSL~~tGGlD~~~RvWDlRtgr~im------~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~  387 (459)
T KOG0272|consen  314 DGSLAATGGLDSLGRVWDLRTGRCIM------FLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHS  387 (459)
T ss_pred             CCceeeccCccchhheeecccCcEEE------EecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccccc
Confidence            3678999999999  99999988763      57889888877655        456788876          7888999


Q ss_pred             cCeEEEEEcC-CCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            64 RGVNWACFHP-TLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        64 ~~V~~v~fsp-~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      +-|+.|.|+| .|..|+|+|.|+++|||.+        ++ +.|+..|-|||+++
T Consensus       388 nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~--------~~-~~~~ksLaGHe~kV  433 (459)
T KOG0272|consen  388 NLVSQVKYSPQEGYFLVTASYDNTVKIWST--------RT-WSPLKSLAGHEGKV  433 (459)
T ss_pred             chhhheEecccCCeEEEEcccCcceeeecC--------CC-cccchhhcCCccce
Confidence            9999999999 4578999999999997665        45 88999999999886

>KOG0263|consensus

Probab=99.48  E-value=1.7e-13  Score=112.28  Aligned_cols=97  Identities=18%  Similarity=0.244  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEe--------ccCCCeeE----------Eeccccc
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF--------GQADAVVK----------HVLEGHD   63 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~--------~~~D~~v~----------~~l~gH~   63 (120)
                      +|-|.||||.|+|  +|..+.....      +.+.+|.+.|.|+.|.        |+.|.+|+          +.|.||.
T Consensus       504 ~GyYFatas~D~tArLWs~d~~~Pl------RifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~  577 (707)
T KOG0263|consen  504 RGYYFATASHDQTARLWSTDHNKPL------RIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHK  577 (707)
T ss_pred             CceEEEecCCCceeeeeecccCCch------hhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCC
Confidence            4678999999999  9987642211      3578999999887764        45677776          7889999


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      +.|.+++|||+|+.||||+.|+.|+        +||.+. -.++..|.+|.+
T Consensus       578 ~~V~al~~Sp~Gr~LaSg~ed~~I~--------iWDl~~-~~~v~~l~~Ht~  620 (707)
T KOG0263|consen  578 GPVTALAFSPCGRYLASGDEDGLIK--------IWDLAN-GSLVKQLKGHTG  620 (707)
T ss_pred             CceEEEEEcCCCceEeecccCCcEE--------EEEcCC-CcchhhhhcccC
Confidence            9999999999999999999999999        888887 667888888854

>KOG0264|consensus

Probab=99.45  E-value=2.4e-13  Score=105.97  Aligned_cols=106  Identities=19%  Similarity=0.214  Sum_probs=80.0

Q ss_pred             CEEEEEcCCCc--eEecCCCcee-eccCCcceEeeccCCCceEEE-------e--ccCCCeeE------------Eeccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKK-NVAPGMGGLEEHLRNPSSTDL-------F--GQADAVVK------------HVLEG   61 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~-~~~~~~~~l~~h~~~v~~~~~-------~--~~~D~~v~------------~~l~g   61 (120)
                      ..|+|||.|.+  +||+...... ....-...+.+|...|+.+.+       +  .+.|+.+.            .+..+
T Consensus       191 g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~a  270 (422)
T KOG0264|consen  191 GTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKA  270 (422)
T ss_pred             eeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccc
Confidence            47899999999  9999753221 111111357788887776433       2  23444442            45568


Q ss_pred             cccCeEEEEEcCCC-CEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhhc
Q psy75            62 HDRGVNWACFHPTL-PLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRARK  119 (120)
Q Consensus        62 H~~~V~~v~fsp~~-~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (120)
                      |++.|+|++|+|.+ .+|||||.|++|.        +||.||+..|+-.||+|++++-+
T Consensus       271 h~~~vn~~~fnp~~~~ilAT~S~D~tV~--------LwDlRnL~~~lh~~e~H~dev~~  321 (422)
T KOG0264|consen  271 HSAEVNCVAFNPFNEFILATGSADKTVA--------LWDLRNLNKPLHTFEGHEDEVFQ  321 (422)
T ss_pred             cCCceeEEEeCCCCCceEEeccCCCcEE--------EeechhcccCceeccCCCcceEE
Confidence            99999999999987 4799999999999        99999999999999999998743

>KOG0319|consensus

Probab=99.45  E-value=3.8e-13  Score=110.07  Aligned_cols=97  Identities=23%  Similarity=0.233  Sum_probs=83.2

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEe--------ccCCCeeE----------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF--------GQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~--------~~~D~~v~----------~~l~gH~~~   65 (120)
                      .++|+||.|+|  ||++++.+..      .+|.+|..++.++.|+        ++.|++++          ++|+||+..
T Consensus       476 kLiAT~SqDktaKiW~le~~~l~------~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~a  549 (775)
T KOG0319|consen  476 KLIATGSQDKTAKIWDLEQLRLL------GVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSA  549 (775)
T ss_pred             ceEEecccccceeeecccCceEE------EEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccce
Confidence            48999999999  9999865443      3689999999887653        45677776          899999999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      |..+.|-.+++.|+||+.||-||        +|+... -.|+.+|..|++|+
T Consensus       550 Vlra~F~~~~~qliS~~adGliK--------lWnikt-~eC~~tlD~H~Drv  592 (775)
T KOG0319|consen  550 VLRASFIRNGKQLISAGADGLIK--------LWNIKT-NECEMTLDAHNDRV  592 (775)
T ss_pred             eEeeeeeeCCcEEEeccCCCcEE--------EEeccc-hhhhhhhhhcccee
Confidence            99999999999999999999999        777666 78899999998875

>KOG0276|consensus

Probab=99.44  E-value=3.5e-13  Score=109.20  Aligned_cols=81  Identities=27%  Similarity=0.394  Sum_probs=68.2

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEe----------ccCCCeeE----------Eeccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF----------GQADAVVK----------HVLEGHD   63 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~----------~~~D~~v~----------~~l~gH~   63 (120)
                      +..||||.|+|  +|.+.+....      -++.+|..+|||+.++          ++.|.+++          ++|+||+
T Consensus       154 ntFaS~sLDrTVKVWslgs~~~n------fTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt  227 (794)
T KOG0276|consen  154 NTFASASLDRTVKVWSLGSPHPN------FTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHT  227 (794)
T ss_pred             cceeeeeccccEEEEEcCCCCCc------eeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhccc
Confidence            67899999999  9998643222      2789999999998764          44555555          7999999


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +.|+.+.|||.-++|+|||+|||+|||.+
T Consensus       228 ~Nvs~v~fhp~lpiiisgsEDGTvriWhs  256 (794)
T KOG0276|consen  228 NNVSFVFFHPELPIIISGSEDGTVRIWNS  256 (794)
T ss_pred             ccceEEEecCCCcEEEEecCCccEEEecC
Confidence            99999999999999999999999999887

>KOG0279|consensus

Probab=99.44  E-value=1.1e-12  Score=97.87  Aligned_cols=94  Identities=19%  Similarity=0.140  Sum_probs=71.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE---------Eeccc--cc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK---------HVLEG--HD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~---------~~l~g--H~   63 (120)
                      +++.+|+|+|++  +||+.++...      +.|.+|...|.++        .++|+.|.+++         +++..  |.
T Consensus        75 g~~alS~swD~~lrlWDl~~g~~t------~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~  148 (315)
T KOG0279|consen   75 GNFALSASWDGTLRLWDLATGEST------RRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHR  148 (315)
T ss_pred             CceEEeccccceEEEEEecCCcEE------EEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCc
Confidence            578899999999  9999876443      3588998877664        44567787775         44443  47


Q ss_pred             cCeEEEEEcCC--CCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhh
Q psy75            64 RGVNWACFHPT--LPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKR  113 (120)
Q Consensus        64 ~~V~~v~fsp~--~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~  113 (120)
                      ..|+||.|+|+  .++|+|+|+|+++|        +||.+++.. ...+-+|
T Consensus       149 ~WVscvrfsP~~~~p~Ivs~s~DktvK--------vWnl~~~~l-~~~~~gh  191 (315)
T KOG0279|consen  149 EWVSCVRFSPNESNPIIVSASWDKTVK--------VWNLRNCQL-RTTFIGH  191 (315)
T ss_pred             CcEEEEEEcCCCCCcEEEEccCCceEE--------EEccCCcch-hhccccc
Confidence            78999999999  67999999999999        777777443 4444444

>KOG0319|consensus

Probab=99.41  E-value=5e-13  Score=109.43  Aligned_cols=104  Identities=19%  Similarity=0.202  Sum_probs=81.0

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCC----cceEeeccCCCceEEE--------eccCCCeeE----------Eec
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPG----MGGLEEHLRNPSSTDL--------FGQADAVVK----------HVL   59 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~----~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l   59 (120)
                      .+.+++|+|.|.|  +|++...+... .|.    ..+-..|...||++.+        .++.|++++          .+|
T Consensus       423 ~asffvsvS~D~tlK~W~l~~s~~~~-~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vL  501 (775)
T KOG0319|consen  423 GASFFVSVSQDCTLKLWDLPKSKETA-FPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVL  501 (775)
T ss_pred             CccEEEEecCCceEEEecCCCccccc-ccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEe
Confidence            5678999999999  99996522211 111    1234578889998654        456777765          789


Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      .||..+|++|.|+|..+++||+|.|+|||        +|-..+ +.++.+||||+--+
T Consensus       502 sGH~RGvw~V~Fs~~dq~laT~SgD~TvK--------IW~is~-fSClkT~eGH~~aV  550 (775)
T KOG0319|consen  502 SGHTRGVWCVSFSKNDQLLATCSGDKTVK--------IWSIST-FSCLKTFEGHTSAV  550 (775)
T ss_pred             eCCccceEEEEeccccceeEeccCCceEE--------EEEecc-ceeeeeecCcccee
Confidence            99999999999999999999999999999        566677 77899999996543

>KOG0279|consensus

Probab=99.41  E-value=6.6e-13  Score=99.09  Aligned_cols=87  Identities=20%  Similarity=0.121  Sum_probs=70.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      ++.|+|+|.|++  +|++.......-.|. ..+.+|++.++.+        -++++.|++++          +.|.||..
T Consensus        28 ~~~l~sasrDk~ii~W~L~~dd~~~G~~~-r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~  106 (315)
T KOG0279|consen   28 SDILVSASRDKTIIVWKLTSDDIKYGVPV-RRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTK  106 (315)
T ss_pred             CceEEEcccceEEEEEEeccCccccCcee-eeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCC
Confidence            679999999999  999975422221111 3688999888764        35677888876          78899999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .|.+|+|+||.++|+|||.|++|++|+.
T Consensus       107 dVlsva~s~dn~qivSGSrDkTiklwnt  134 (315)
T KOG0279|consen  107 DVLSVAFSTDNRQIVSGSRDKTIKLWNT  134 (315)
T ss_pred             ceEEEEecCCCceeecCCCcceeeeeee
Confidence            9999999999999999999999999877

>KOG0271|consensus

Probab=99.39  E-value=1.4e-12  Score=100.89  Aligned_cols=49  Identities=20%  Similarity=0.146  Sum_probs=41.6

Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      .+.||.+-||.|.||||+++|||+|-|+.||        +||.++ -..|+.|.||-+
T Consensus       362 rmtgHq~lVn~V~fSPd~r~IASaSFDkSVk--------LW~g~t-Gk~lasfRGHv~  410 (480)
T KOG0271|consen  362 RMTGHQALVNHVSFSPDGRYIASASFDKSVK--------LWDGRT-GKFLASFRGHVA  410 (480)
T ss_pred             hhhchhhheeeEEECCCccEEEEeeccccee--------eeeCCC-cchhhhhhhccc
Confidence            5679999999999999999999999999999        667555 556777777754

>KOG0292|consensus

Probab=99.38  E-value=5.8e-13  Score=111.24  Aligned_cols=84  Identities=57%  Similarity=0.875  Sum_probs=70.8

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCC-ceEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEe
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNP-SSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGK   82 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v-~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs   82 (120)
                      ++++|||.|.|  +||+.+.++++..|.  .+..+.... .+.+++|+.|..|+++++||..+||.++|||..++|+||+
T Consensus       148 DlIVSaSLDQTVRVWDisGLRkk~~~pg--~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~  225 (1202)
T KOG0292|consen  148 DLIVSASLDQTVRVWDISGLRKKNKAPG--SLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGA  225 (1202)
T ss_pred             ceEEEecccceEEEEeecchhccCCCCC--CchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecC
Confidence            68999999999  999999888877776  344333221 2237889999999999999999999999999999999999


Q ss_pred             CCCCEEecC
Q psy75            83 GLCLLDHGP   91 (120)
Q Consensus        83 ~D~~iki~~   91 (120)
                      +|+-||+|.
T Consensus       226 DDRqVKlWr  234 (1202)
T KOG0292|consen  226 DDRQVKLWR  234 (1202)
T ss_pred             CcceeeEEE
Confidence            999999853

>KOG0645|consensus

Probab=99.37  E-value=4e-12  Score=94.72  Aligned_cols=84  Identities=15%  Similarity=0.071  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCeeE-------------Eeccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVVK-------------HVLEG   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v~-------------~~l~g   61 (120)
                      ++|||+||.|+.  +|.+......   .+...+..|.+.|.-        +.+++++|.+++             ++|.+
T Consensus       117 G~~LATCSRDKSVWiWe~deddEf---ec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g  193 (312)
T KOG0645|consen  117 GNYLATCSRDKSVWIWEIDEDDEF---ECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDG  193 (312)
T ss_pred             CCEEEEeeCCCeEEEEEecCCCcE---EEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecC
Confidence            789999999999  9998743221   222467788877754        456667777776             78899


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |.+.|++++|+|.|..++|+++|++++||.
T Consensus       194 ~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~  223 (312)
T KOG0645|consen  194 HENTVWSLAFDNIGSRLVSCSDDGTVSIWR  223 (312)
T ss_pred             ccceEEEEEecCCCceEEEecCCcceEeee
Confidence            999999999999999999999999999998

>KOG0645|consensus

Probab=99.37  E-value=2.6e-12  Score=95.72  Aligned_cols=101  Identities=20%  Similarity=0.155  Sum_probs=80.1

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec--------cCCCee-------------EEecc
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG--------QADAVV-------------KHVLE   60 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~--------~~D~~v-------------~~~l~   60 (120)
                      .+++||+||.|.|  ||.-..+.    ..+..++++|..+|.++.++.        +.|++|             ..+|.
T Consensus        72 ~g~~La~aSFD~t~~Iw~k~~~e----fecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~  147 (312)
T KOG0645|consen   72 HGRYLASASFDATVVIWKKEDGE----FECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQ  147 (312)
T ss_pred             CCcEEEEeeccceEEEeecCCCc----eeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeec
Confidence            5799999999999  99754221    122357999999999876543        234443             36889


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhh
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKRE  114 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~  114 (120)
                      +|++.|.-|.|||...+|+|+|.|++||+|+.      +..|.+.++++|.+|+
T Consensus       148 ~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~------~~dddW~c~~tl~g~~  195 (312)
T KOG0645|consen  148 EHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRD------EDDDDWECVQTLDGHE  195 (312)
T ss_pred             cccccccEEEEcCCcceeEEeccCCeEEEEee------cCCCCeeEEEEecCcc
Confidence            99999999999999999999999999998876      3366689999999986

>KOG0291|consensus

Probab=99.34  E-value=3.7e-12  Score=104.86  Aligned_cols=35  Identities=26%  Similarity=0.271  Sum_probs=33.2

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..|.||.++|.+++|+|.+..|||||||+|||+|+
T Consensus       472 DiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~  506 (893)
T KOG0291|consen  472 DILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWD  506 (893)
T ss_pred             ehhcCCCCcceeeEEccccCeEEeccccceEEEEE
Confidence            57889999999999999999999999999999876

>KOG0286|consensus

Probab=99.33  E-value=5.7e-12  Score=94.73  Aligned_cols=80  Identities=20%  Similarity=0.126  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec--------cCCCeeE------------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG--------QADAVVK------------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~--------~~D~~v~------------------   56 (120)
                      +|..+||+.|++  |||+..+..+      ++|.+|...||.+.|++        +.|++++                  
T Consensus       199 ~ntFvSg~cD~~aklWD~R~~~c~------qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~  272 (343)
T KOG0286|consen  199 GNTFVSGGCDKSAKLWDVRSGQCV------QTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSI  272 (343)
T ss_pred             CCeEEecccccceeeeeccCccee------EeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcc
Confidence            588999999999  9999876554      47889999998877653        3344433                  


Q ss_pred             ------------------------------------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            57 ------------------------------------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        57 ------------------------------------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                                                          -.|.||.+.|.++..+|||..++|||||.++|||
T Consensus       273 ~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW  342 (343)
T KOG0286|consen  273 ICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIW  342 (343)
T ss_pred             cCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeec
Confidence                                                3566788888888888888778888888888877

>KOG0263|consensus

Probab=99.33  E-value=2.3e-12  Score=105.71  Aligned_cols=97  Identities=18%  Similarity=0.215  Sum_probs=75.4

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~gH~~~   65 (120)
                      ++|+|||.|++  +|.+.+-...      -.+.+|...|.+++|        +++.|++.+          +.+.||.+.
T Consensus       464 rfLlScSED~svRLWsl~t~s~~------V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsD  537 (707)
T KOG0263|consen  464 RFLLSCSEDSSVRLWSLDTWSCL------VIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSD  537 (707)
T ss_pred             cceeeccCCcceeeeecccceeE------EEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccc
Confidence            68999999999  9999764432      246688888887665        345687776          688899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      |.||+|||+..++++||.|++++        +||+.. =..++.|.||.+.+
T Consensus       538 V~cv~FHPNs~Y~aTGSsD~tVR--------lWDv~~-G~~VRiF~GH~~~V  580 (707)
T KOG0263|consen  538 VDCVSFHPNSNYVATGSSDRTVR--------LWDVST-GNSVRIFTGHKGPV  580 (707)
T ss_pred             cceEEECCcccccccCCCCceEE--------EEEcCC-CcEEEEecCCCCce
Confidence            99999999999999999999999        566554 23366667765543

>KOG0281|consensus

Probab=99.32  E-value=1.3e-12  Score=100.37  Aligned_cols=74  Identities=26%  Similarity=0.287  Sum_probs=50.2

Q ss_pred             eEeeccCCCceEE------EeccCCCeeE----------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceE
Q psy75            34 GLEEHLRNPSSTD------LFGQADAVVK----------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVV   97 (120)
Q Consensus        34 ~l~~h~~~v~~~~------~~~~~D~~v~----------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~   97 (120)
                      .+.+|.+.||.++      ++++.|.+++          .++.||..+|.|+.+  .+++++|||+|++|+        +
T Consensus       315 VLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIR--------l  384 (499)
T KOG0281|consen  315 VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIR--------L  384 (499)
T ss_pred             HHhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEE--------E
Confidence            4556666665433      3455566655          566777777777777  356777777777777        6


Q ss_pred             eeCCCCccchhhhhhhhhhhh
Q psy75            98 LDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~  118 (120)
                      ||..- -.+|..|||||+-+|
T Consensus       385 wdi~~-G~cLRvLeGHEeLvR  404 (499)
T KOG0281|consen  385 WDIEC-GACLRVLEGHEELVR  404 (499)
T ss_pred             Eeccc-cHHHHHHhchHHhhh
Confidence            66443 467899999998765

>KOG0276|consensus

Probab=99.32  E-value=4.5e-12  Score=102.87  Aligned_cols=99  Identities=23%  Similarity=0.224  Sum_probs=80.9

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE----------EeccccccC
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~----------~~l~gH~~~   65 (120)
                      +++|+|.|.+  +||.++.=..     .++|++|.+-|.++.+         +++.|.+++          .+|+||..+
T Consensus       111 ~vLtsSDDm~iKlW~we~~wa~-----~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekG  185 (794)
T KOG0276|consen  111 YVLTSSDDMTIKLWDWENEWAC-----EQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKG  185 (794)
T ss_pred             eEEecCCccEEEEeeccCceee-----eeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccC
Confidence            7899999999  9998763222     2579999987766543         456788887          789999999


Q ss_pred             eEEEEEcCCC--CEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhhc
Q psy75            66 VNWACFHPTL--PLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRARK  119 (120)
Q Consensus        66 V~~v~fsp~~--~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (120)
                      ||||.|-|-|  +.|+||++|.++|        +||.-+ ..|+++||||-..+++
T Consensus       186 VN~Vdyy~~gdkpylIsgaDD~tiK--------vWDyQt-k~CV~TLeGHt~Nvs~  232 (794)
T KOG0276|consen  186 VNCVDYYTGGDKPYLISGADDLTIK--------VWDYQT-KSCVQTLEGHTNNVSF  232 (794)
T ss_pred             cceEEeccCCCcceEEecCCCceEE--------Eeecch-HHHHHHhhcccccceE
Confidence            9999999866  6899999999999        888777 8899999999766653

>KOG0316|consensus

Probab=99.29  E-value=2e-11  Score=89.87  Aligned_cols=99  Identities=17%  Similarity=0.147  Sum_probs=75.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------------------EEEeccCCCeeEEecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------------------TDLFGQADAVVKHVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------------------~~~~~~~D~~v~~~l~gH~~   64 (120)
                      +||.++|+.|+|  +|+.-.+....      ++.+|..+|-+                  +.+|....+.+.+.+.||.+
T Consensus        29 GnY~ltcGsdrtvrLWNp~rg~lik------tYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~a  102 (307)
T KOG0316|consen   29 GNYCLTCGSDRTVRLWNPLRGALIK------TYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLA  102 (307)
T ss_pred             CCEEEEcCCCceEEeecccccceee------eecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccc
Confidence            789999999999  99986554443      34444443322                  23344445566689999999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEee-CCCCccchhhhhhhhhhh
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLD-SSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  117 (120)
                      .||.|.|+-+...++|||.|.+++        +|| .++-..|++.|....+-+
T Consensus       103 qVNtV~fNeesSVv~SgsfD~s~r--------~wDCRS~s~ePiQildea~D~V  148 (307)
T KOG0316|consen  103 QVNTVRFNEESSVVASGSFDSSVR--------LWDCRSRSFEPIQILDEAKDGV  148 (307)
T ss_pred             eeeEEEecCcceEEEeccccceeE--------EEEcccCCCCccchhhhhcCce
Confidence            999999999999999999999999        888 345579999998776544

>PTZ00421 coronin; Provisional

Probab=99.27  E-value=3.3e-11  Score=97.20  Aligned_cols=100  Identities=15%  Similarity=0.132  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCcee-eccCCcceEeeccCCCceE---------EEeccCCCeeE----------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKK-NVAPGMGGLEEHLRNPSST---------DLFGQADAVVK----------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~-~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~----------~~l~gH   62 (120)
                      .++|+|||.|++  +||+...... ........+.+|...|.++         .++++.|++++          ..+.+|
T Consensus        88 ~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h  167 (493)
T PTZ00421         88 PQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCH  167 (493)
T ss_pred             CCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCC
Confidence            468999999999  9999643211 0000112456676655543         34455677665          567789


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhh
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKR  113 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~  113 (120)
                      ...|.+++|+|++.+|++|+.|++|+        +||.+. ..++..+..|
T Consensus       168 ~~~V~sla~spdG~lLatgs~Dg~Ir--------IwD~rs-g~~v~tl~~H  209 (493)
T PTZ00421        168 SDQITSLEWNLDGSLLCTTSKDKKLN--------IIDPRD-GTIVSSVEAH  209 (493)
T ss_pred             CCceEEEEEECCCCEEEEecCCCEEE--------EEECCC-CcEEEEEecC
Confidence            99999999999999999999999999        555444 2344445444

>KOG0284|consensus

Probab=99.27  E-value=1.8e-11  Score=95.24  Aligned_cols=97  Identities=19%  Similarity=0.147  Sum_probs=80.3

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------EeccccccCe
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDRGV   66 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~~V   66 (120)
                      .++|||.|++  |||....+..      +.+.+|...|.++        .++++.|..|+          -++.+|.+.|
T Consensus       194 kF~t~SdDg~ikiWdf~~~kee------~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntV  267 (464)
T KOG0284|consen  194 KFLTCSDDGTIKIWDFRMPKEE------RVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTV  267 (464)
T ss_pred             eeEEecCCCeEEEEeccCCchh------heeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceE
Confidence            5789999999  9998654433      3577887777663        45667676665          5777999999


Q ss_pred             EEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhh
Q psy75            67 NWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        67 ~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
                      ..+.|+|++++|+|+|.|..++        +||+| .+.+|..+.+|+.++.
T Consensus       268 l~~~f~~n~N~Llt~skD~~~k--------v~DiR-~mkEl~~~r~Hkkdv~  310 (464)
T KOG0284|consen  268 LAVKFNPNGNWLLTGSKDQSCK--------VFDIR-TMKELFTYRGHKKDVT  310 (464)
T ss_pred             EEEEEcCCCCeeEEccCCceEE--------EEehh-HhHHHHHhhcchhhhe
Confidence            9999999999999999999999        99999 5888999999998875

>KOG0266|consensus

Probab=99.27  E-value=4e-11  Score=95.59  Aligned_cols=81  Identities=23%  Similarity=0.204  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCCc--eEecC-CCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNA-QLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~-~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~   63 (120)
                      +.+|++|+.|++  +||+. .++..      .++.+|...++++        .++++.|++|+          .++.+|.
T Consensus       215 ~~~l~s~s~D~tiriwd~~~~~~~~------~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs  288 (456)
T KOG0266|consen  215 GSYLLSGSDDKTLRIWDLKDDGRNL------KTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHS  288 (456)
T ss_pred             CcEEEEecCCceEEEeeccCCCeEE------EEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccC
Confidence            458999999999  99993 33333      3677888877764        44667787776          7888999


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..|++++|+|++..|+++|.|++|++|+
T Consensus       289 ~~is~~~f~~d~~~l~s~s~d~~i~vwd  316 (456)
T KOG0266|consen  289 DGISGLAFSPDGNLLVSASYDGTIRVWD  316 (456)
T ss_pred             CceEEEEECCCCCEEEEcCCCccEEEEE
Confidence            9999999999999999999999999443

>KOG0266|consensus

Probab=99.25  E-value=3.1e-11  Score=96.28  Aligned_cols=100  Identities=21%  Similarity=0.257  Sum_probs=76.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE-----------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK-----------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~-----------~~l~gH~   63 (120)
                      ++++++++.|++  +|+..+.+.. .   ...+.+|...|+++.+        .++.|++++           +++.||.
T Consensus       171 g~~l~~~~~~~~i~~~~~~~~~~~-~---~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~  246 (456)
T KOG0266|consen  171 GRALAAASSDGLIRIWKLEGIKSN-L---LRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHS  246 (456)
T ss_pred             CCeEEEccCCCcEEEeecccccch-h---hccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCC
Confidence            678999999999  9998544310 0   1234667776665433        344565554           8889999


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      ..|++++|+|++++++||+.|++|+        +||.+. ..++..|++|.+.+
T Consensus       247 ~~v~~~~f~p~g~~i~Sgs~D~tvr--------iWd~~~-~~~~~~l~~hs~~i  291 (456)
T KOG0266|consen  247 TYVTSVAFSPDGNLLVSGSDDGTVR--------IWDVRT-GECVRKLKGHSDGI  291 (456)
T ss_pred             CceEEEEecCCCCEEEEecCCCcEE--------EEeccC-CeEEEeeeccCCce
Confidence            9999999999999999999999999        888777 77888888886654

>KOG0271|consensus

Probab=99.25  E-value=1.6e-11  Score=95.20  Aligned_cols=81  Identities=19%  Similarity=0.105  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      ++++||||.|+.  +||..+++-.      .+|.+|-..|+.        +.++++.|.+++          +-|.||..
T Consensus       379 ~r~IASaSFDkSVkLW~g~tGk~l------asfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~D  452 (480)
T KOG0271|consen  379 GRYIASASFDKSVKLWDGRTGKFL------ASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHAD  452 (480)
T ss_pred             ccEEEEeecccceeeeeCCCcchh------hhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCc
Confidence            579999999999  9998765432      368889887765        456778888876          56779999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|.+|.|+|||+.++||+.|+.+|+|.
T Consensus       453 EVf~vDwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  453 EVFAVDWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             eEEEEEecCCCceeecCCCceEEEeec
Confidence            999999999999999999999999885

>KOG0273|consensus

Probab=99.24  E-value=2.7e-11  Score=95.54  Aligned_cols=83  Identities=20%  Similarity=0.112  Sum_probs=63.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce-----------------EEEeccCCCeeE---------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS-----------------TDLFGQADAVVK---------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~-----------------~~~~~~~D~~v~---------   56 (120)
                      +.+|+|||.|+|  ||.+......+      .+..|..++..                 ..++++.|.+|+         
T Consensus       371 g~LLaS~SdD~TlkiWs~~~~~~~~------~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~  444 (524)
T KOG0273|consen  371 GSLLASCSDDGTLKIWSMGQSNSVH------DLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVP  444 (524)
T ss_pred             CceEEEecCCCeeEeeecCCCcchh------hhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCce
Confidence            679999999999  99986543332      24445433322                 344555565554         


Q ss_pred             -EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCC
Q psy75            57 -HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNL   93 (120)
Q Consensus        57 -~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~   93 (120)
                       .+|..|..+|.+|+|+|+|+++|||+-|+.|.||+.+
T Consensus       445 i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~  482 (524)
T KOG0273|consen  445 IHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK  482 (524)
T ss_pred             eEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc
Confidence             7889999999999999999999999999999998873

>KOG0285|consensus

Probab=99.24  E-value=1.9e-11  Score=94.12  Aligned_cols=97  Identities=22%  Similarity=0.194  Sum_probs=76.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      -.+++|||.|+|  |||+.++..+.      ++.+|-..+..        ..|+++.|+.|+          +.+-||.+
T Consensus       163 n~wf~tgs~DrtikIwDlatg~Lkl------tltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS  236 (460)
T KOG0285|consen  163 NEWFATGSADRTIKIWDLATGQLKL------TLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLS  236 (460)
T ss_pred             ceeEEecCCCceeEEEEcccCeEEE------eecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccc
Confidence            357899999999  99999876654      34455433322        356677888887          45569999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR  116 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (120)
                      +|.+++.||.-..|+||+.|.++|        +||+|. ..++-+|.||..-
T Consensus       237 ~V~~L~lhPTldvl~t~grDst~R--------vWDiRt-r~~V~~l~GH~~~  279 (460)
T KOG0285|consen  237 GVYCLDLHPTLDVLVTGGRDSTIR--------VWDIRT-RASVHVLSGHTNP  279 (460)
T ss_pred             eeEEEeccccceeEEecCCcceEE--------Eeeecc-cceEEEecCCCCc
Confidence            999999999999999999999999        899887 5668888888653

>KOG0281|consensus

Probab=99.23  E-value=1.3e-11  Score=95.03  Aligned_cols=95  Identities=22%  Similarity=0.183  Sum_probs=71.2

Q ss_pred             CCCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCC------ceEEEeccCCCeeE-------------Eecc
Q psy75             2 RAIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNP------SSTDLFGQADAVVK-------------HVLE   60 (120)
Q Consensus         2 ~~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v------~~~~~~~~~D~~v~-------------~~l~   60 (120)
                      +|=-+.|+|||.|.|  +||.++++..++      +..|...|      +..-++.+.|.++.             .++.
T Consensus       244 qyd~rviisGSSDsTvrvWDv~tge~l~t------lihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLv  317 (499)
T KOG0281|consen  244 QYDERVIVSGSSDSTVRVWDVNTGEPLNT------LIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLV  317 (499)
T ss_pred             eccceEEEecCCCceEEEEeccCCchhhH------HhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHh
Confidence            455578999999999  999988776543      33444333      22334445555543             7888


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhh
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKR  113 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~  113 (120)
                      ||.++||.|.|+.  ++|+|+|.|+|||        +|+... ++++.+|.+|
T Consensus       318 GHrAaVNvVdfd~--kyIVsASgDRTik--------vW~~st-~efvRtl~gH  359 (499)
T KOG0281|consen  318 GHRAAVNVVDFDD--KYIVSASGDRTIK--------VWSTST-CEFVRTLNGH  359 (499)
T ss_pred             hhhhheeeecccc--ceEEEecCCceEE--------EEeccc-eeeehhhhcc
Confidence            9999999999964  6999999999999        777555 8889999998

>KOG0313|consensus

Probab=99.23  E-value=3.2e-11  Score=93.14  Aligned_cols=104  Identities=20%  Similarity=0.129  Sum_probs=75.0

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccC-CCceEEEeccCCC-------------eeEEeccccccCeEEE
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLR-NPSSTDLFGQADA-------------VVKHVLEGHDRGVNWA   69 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~-~v~~~~~~~~~D~-------------~v~~~l~gH~~~V~~v   69 (120)
                      ..+.|+|+|.|  .||+..+..+....+...|..-.. ..+.+.+.++.|.             .++++|.||.+.|.+|
T Consensus       272 ~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssv  351 (423)
T KOG0313|consen  272 TVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSV  351 (423)
T ss_pred             CceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhhe
Confidence            35789999999  999987554433222222221111 1223344454443             2348999999999999


Q ss_pred             EEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            70 CFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        70 ~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      .|||... +|+|||.|+++|        +||.|-..-||-++.+|.+++
T Consensus       352 kwsp~~~~~~~S~S~D~t~k--------lWDvRS~k~plydI~~h~DKv  392 (423)
T KOG0313|consen  352 KWSPTNEFQLVSGSYDNTVK--------LWDVRSTKAPLYDIAGHNDKV  392 (423)
T ss_pred             ecCCCCceEEEEEecCCeEE--------EEEeccCCCcceeeccCCceE
Confidence            9999876 699999999999        999999888999999997764

>KOG0295|consensus

Probab=99.21  E-value=5.6e-11  Score=91.41  Aligned_cols=95  Identities=26%  Similarity=0.208  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce-----------------------EEEeccCCCeeE---
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS-----------------------TDLFGQADAVVK---   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~-----------------------~~~~~~~D~~v~---   56 (120)
                      +.++||||.|.+  +|-..+..++.      .+..|...+.+                       +..+++.|++++   
T Consensus       247 Gti~As~s~dqtl~vW~~~t~~~k~------~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wd  320 (406)
T KOG0295|consen  247 GTIIASCSNDQTLRVWVVATKQCKA------ELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWD  320 (406)
T ss_pred             eeEEEecCCCceEEEEEeccchhhh------hhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEe
Confidence            468899999999  99876642221      22333332222                       334566777776   


Q ss_pred             -------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhh
Q psy75            57 -------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKRE  114 (120)
Q Consensus        57 -------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~  114 (120)
                             .+|.||.+.|..++|||-|++|+|+.+|++++        +||+.+ ..+..+++-|+
T Consensus       321 v~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlr--------vwdl~~-~~cmk~~~ah~  376 (406)
T KOG0295|consen  321 VSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLR--------VWDLKN-LQCMKTLEAHE  376 (406)
T ss_pred             ccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEE--------EEEecc-ceeeeccCCCc
Confidence                   78899999999999999999999999999999        778776 45555555554

>KOG0300|consensus

Probab=99.21  E-value=7.3e-11  Score=90.14  Aligned_cols=92  Identities=18%  Similarity=0.212  Sum_probs=71.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCc--------eEEEeccCCCeeE-----------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPS--------STDLFGQADAVVK-----------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~--------~~~~~~~~D~~v~-----------~~l~gH~   63 (120)
                      ++.++++|||.|  +||++++...+.      +.+|..+.+        .+.+.++.|.+.+           .+|.||+
T Consensus       284 g~Q~vTaSWDRTAnlwDVEtge~v~~------LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHt  357 (481)
T KOG0300|consen  284 GQQMVTASWDRTANLWDVETGEVVNI------LTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHT  357 (481)
T ss_pred             cceeeeeeccccceeeeeccCceecc------ccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccc
Confidence            567899999999  999988766543      445544332        2455666676655           6889999


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhh
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~  111 (120)
                      ..|+++.|+.+ ..++|||+|++||        +||.+|.-.||+++.
T Consensus       358 dtVTS~vF~~d-d~vVSgSDDrTvK--------vWdLrNMRsplATIR  396 (481)
T KOG0300|consen  358 DTVTSVVFNTD-DRVVSGSDDRTVK--------VWDLRNMRSPLATIR  396 (481)
T ss_pred             cceeEEEEecC-CceeecCCCceEE--------EeeeccccCcceeee
Confidence            99999999976 5578999999999        889999888888764

>KOG0273|consensus

Probab=99.21  E-value=1.6e-10  Score=91.29  Aligned_cols=82  Identities=21%  Similarity=0.137  Sum_probs=60.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCC------ceEEE-eccCCCeeE----------EeccccccC
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNP------SSTDL-FGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v------~~~~~-~~~~D~~v~----------~~l~gH~~~   65 (120)
                      ++||+|++-|+|  +||..++.....      +.-|+..-      +...| .++.|+.+.          .++.||.+.
T Consensus       288 G~yilS~~vD~ttilwd~~~g~~~q~------f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~  361 (524)
T KOG0273|consen  288 GTYILSGGVDGTTILWDAHTGTVKQQ------FEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGE  361 (524)
T ss_pred             CCEEEeccCCccEEEEeccCceEEEe------eeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCc
Confidence            679999999999  999876555432      44444331      11122 334565543          788999999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      |+++.|+|.+.+|+|+|+|+|+|||.-
T Consensus       362 V~alk~n~tg~LLaS~SdD~TlkiWs~  388 (524)
T KOG0273|consen  362 VNALKWNPTGSLLASCSDDGTLKIWSM  388 (524)
T ss_pred             eEEEEECCCCceEEEecCCCeeEeeec
Confidence            999999999999999999999997764

>KOG0274|consensus

Probab=99.19  E-value=1.1e-10  Score=94.93  Aligned_cols=97  Identities=24%  Similarity=0.221  Sum_probs=78.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE----------EeccccccCe
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK----------HVLEGHDRGV   66 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~----------~~l~gH~~~V   66 (120)
                      .++|+|||.|.|  +||..++.+..      ++.+|...+.++      ..+|+.|.+|+          .++.||...|
T Consensus       261 ~~~lvsgS~D~t~rvWd~~sg~C~~------~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V  334 (537)
T KOG0274|consen  261 GDKLVSGSTDKTERVWDCSTGECTH------SLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPV  334 (537)
T ss_pred             CCEEEEEecCCcEEeEecCCCcEEE------EecCCCceEEEEEccCceEeeccCCceEEEEeccCcceEEEeccccccE
Confidence            789999999999  99998877664      456666655442      34456777776          6777899999


Q ss_pred             EEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhh
Q psy75            67 NWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        67 ~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
                      +++..+  +.+++||+.|++|+        +||.+ ...++..|.+|.+++.
T Consensus       335 ~~v~~~--~~~lvsgs~d~~v~--------VW~~~-~~~cl~sl~gH~~~V~  375 (537)
T KOG0274|consen  335 NCVQLD--EPLLVSGSYDGTVK--------VWDPR-TGKCLKSLSGHTGRVY  375 (537)
T ss_pred             EEEEec--CCEEEEEecCceEE--------EEEhh-hceeeeeecCCcceEE
Confidence            999998  78999999999999        88866 5889999999988764

>KOG4283|consensus

Probab=99.14  E-value=2.6e-10  Score=86.31  Aligned_cols=101  Identities=20%  Similarity=0.174  Sum_probs=72.2

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccC-CC---ceEEEeccCCCeeE----------EeccccccCeEEE
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLR-NP---SSTDLFGQADAVVK----------HVLEGHDRGVNWA   69 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~-~v---~~~~~~~~~D~~v~----------~~l~gH~~~V~~v   69 (120)
                      .+..|+|.|++  +||.++........-+.....|.- .+   .|+...+..|.+|+          ++|.||...|.+|
T Consensus       115 GmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV  194 (397)
T KOG4283|consen  115 GMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAV  194 (397)
T ss_pred             ceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEE
Confidence            36789999999  999987443222211112222322 22   24444555555554          8999999999999


Q ss_pred             EEcCCCCE-EEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhh
Q psy75            70 CFHPTLPL-IVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKRE  114 (120)
Q Consensus        70 ~fsp~~~~-laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~  114 (120)
                      .|+|...+ |+|||.|+.||        +||+|...-+++.|..|.
T Consensus       195 ~Wsp~~e~vLatgsaDg~ir--------lWDiRrasgcf~~lD~hn  232 (397)
T KOG4283|consen  195 EWSPSSEWVLATGSADGAIR--------LWDIRRASGCFRVLDQHN  232 (397)
T ss_pred             EeccCceeEEEecCCCceEE--------EEEeecccceeEEeeccc
Confidence            99999885 99999999999        889898888888887774

>KOG0269|consensus

Probab=99.12  E-value=1.3e-10  Score=95.87  Aligned_cols=82  Identities=12%  Similarity=0.116  Sum_probs=60.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec--------cCC-CeeE-----------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG--------QAD-AVVK-----------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~--------~~D-~~v~-----------~~l~gH   62 (120)
                      +++|+|||.|++  +||+.....+      +++.+.+..+.++.++.        ..| |.+.           ..+.+|
T Consensus       146 p~iliSGSQDg~vK~~DlR~~~S~------~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH  219 (839)
T KOG0269|consen  146 PNILISGSQDGTVKCWDLRSKKSK------STFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAH  219 (839)
T ss_pred             ccEEEecCCCceEEEEeeeccccc------ccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcc
Confidence            689999999999  9999653332      23444444444444432        233 4433           577899


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .+.|.++.|||++.+||||+.|++||||+-
T Consensus       220 ~GpV~c~nwhPnr~~lATGGRDK~vkiWd~  249 (839)
T KOG0269|consen  220 NGPVLCLNWHPNREWLATGGRDKMVKIWDM  249 (839)
T ss_pred             cCceEEEeecCCCceeeecCCCccEEEEec
Confidence            999999999999999999999999998653

>KOG0315|consensus

Probab=99.10  E-value=6.1e-10  Score=82.57  Aligned_cols=80  Identities=14%  Similarity=0.053  Sum_probs=59.3

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE-----------------EEec--cCCCeeEEecccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST-----------------DLFG--QADAVVKHVLEGHDR   64 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~-----------------~~~~--~~D~~v~~~l~gH~~   64 (120)
                      -+|||+|.|.|  +|...++++....+++      ..-||.+                 .++.  +.....+.++++|+.
T Consensus        11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~------dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~k   84 (311)
T KOG0315|consen   11 VILVSAGYDHTIRFWQALTGICSRTIQHP------DSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTK   84 (311)
T ss_pred             eEEEeccCcceeeeeehhcCeEEEEEecC------ccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCC
Confidence            47999999999  9999888775543322      1223332                 2222  223345689999999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|++|.|+-+|++++|||+||++|||+
T Consensus        85 NVtaVgF~~dgrWMyTgseDgt~kIWd  111 (311)
T KOG0315|consen   85 NVTAVGFQCDGRWMYTGSEDGTVKIWD  111 (311)
T ss_pred             ceEEEEEeecCeEEEecCCCceEEEEe
Confidence            999999999999999999999999443

>KOG0277|consensus

Probab=99.10  E-value=3.4e-10  Score=84.04  Aligned_cols=100  Identities=15%  Similarity=0.121  Sum_probs=77.3

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE----------Eecccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +.++++|+|+|  ||+.......      ++|.+|...|...         -.+.+.|+.++          ..+..|..
T Consensus       118 ~~~ltsSWD~TiKLW~~~r~~Sv------~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~  191 (311)
T KOG0277|consen  118 RIFLTSSWDGTIKLWDPNRPNSV------QTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNS  191 (311)
T ss_pred             eeEEeeccCCceEeecCCCCcce------EeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccc
Confidence            45677799999  9998654333      2566666544432         23445677765          56789999


Q ss_pred             CeEEEEEcCCC-CEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhhc
Q psy75            65 GVNWACFHPTL-PLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRARK  119 (120)
Q Consensus        65 ~V~~v~fsp~~-~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (120)
                      .|.+..|+--. ..++||+.|+.||        .||.|++-.||.+|-+|+=.+||
T Consensus       192 Eil~cdw~ky~~~vl~Tg~vd~~vr--------~wDir~~r~pl~eL~gh~~AVRk  239 (311)
T KOG0277|consen  192 EILCCDWSKYNHNVLATGGVDNLVR--------GWDIRNLRTPLFELNGHGLAVRK  239 (311)
T ss_pred             eeEeecccccCCcEEEecCCCceEE--------EEehhhccccceeecCCceEEEE
Confidence            99999999866 4799999999999        99999999999999999766665

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.09  E-value=2.3e-10  Score=61.08  Aligned_cols=38  Identities=16%  Similarity=0.218  Sum_probs=34.8

Q ss_pred             eeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            54 VVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        54 ~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ++..++.+|...|++++|+|++..|+||+.|++|++|+
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            45678999999999999999999999999999999764

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG0275|consensus

Probab=99.08  E-value=1.2e-10  Score=89.27  Aligned_cols=80  Identities=16%  Similarity=0.117  Sum_probs=64.7

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEe-eccCCCceEEE--------eccCCCeeE----------Eecccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLE-EHLRNPSSTDL--------FGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~-~h~~~v~~~~~--------~~~~D~~v~----------~~l~gH~~   64 (120)
                      .+||||+.|+.  +|.+.++.+..      .|. .|+.+|.|+.|        +++.|.+++          +.+.||++
T Consensus       276 EMlAsGsqDGkIKvWri~tG~ClR------rFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsS  349 (508)
T KOG0275|consen  276 EMLASGSQDGKIKVWRIETGQCLR------RFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSS  349 (508)
T ss_pred             HHhhccCcCCcEEEEEEecchHHH------HhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccc
Confidence            36899999999  99998765432      343 67788877655        456777776          67789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      -|+.+.|.++|..++|+|.|+++|+|.
T Consensus       350 yvn~a~ft~dG~~iisaSsDgtvkvW~  376 (508)
T KOG0275|consen  350 YVNEATFTDDGHHIISASSDGTVKVWH  376 (508)
T ss_pred             cccceEEcCCCCeEEEecCCccEEEec
Confidence            999999999999999999999999554

>KOG0301|consensus

Probab=99.05  E-value=4.2e-10  Score=92.12  Aligned_cols=79  Identities=20%  Similarity=0.105  Sum_probs=65.8

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE-------EeccCCCeeE--------EeccccccCeEEE
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD-------LFGQADAVVK--------HVLEGHDRGVNWA   69 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~-------~~~~~D~~v~--------~~l~gH~~~V~~v   69 (120)
                      .|++|+.|.+  +|...+....      .+|.+|...|.++.       +++++|.+++        .++.||++.|++|
T Consensus        73 ~l~~g~~D~~i~v~~~~~~~P~------~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~~~l~~~l~gH~asVWAv  146 (745)
T KOG0301|consen   73 RLVVGGMDTTIIVFKLSQAEPL------YTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRIGELVYSLQGHTASVWAV  146 (745)
T ss_pred             ceEeecccceEEEEecCCCCch------hhhhccccceeeeecCCcCceEecccccceEEecchhhhcccCCcchheeee
Confidence            5888999999  8987653322      35778888877653       7899999887        7889999999999


Q ss_pred             EEcCCCCEEEEEeCCCCEEecCC
Q psy75            70 CFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        70 ~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ++-|.+ .++|||.|++||+|+.
T Consensus       147 ~~l~e~-~~vTgsaDKtIklWk~  168 (745)
T KOG0301|consen  147 ASLPEN-TYVTGSADKTIKLWKG  168 (745)
T ss_pred             eecCCC-cEEeccCcceeeeccC
Confidence            999987 7889999999999987

>PTZ00420 coronin; Provisional

Probab=99.04  E-value=2.2e-09  Score=87.92  Aligned_cols=101  Identities=11%  Similarity=0.019  Sum_probs=69.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCce-eecc-CCcceEeeccCCCceEE---------EeccCCCeeE----------Eeccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRK-KNVA-PGMGGLEEHLRNPSSTD---------LFGQADAVVK----------HVLEG   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~-~~~~-~~~~~l~~h~~~v~~~~---------~~~~~D~~v~----------~~l~g   61 (120)
                      +++|||||.|++  +||+..... .... .....+.+|...|.++.         ++++.|++++          ..+. 
T Consensus        87 ~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-  165 (568)
T PTZ00420         87 SEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-  165 (568)
T ss_pred             CCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-
Confidence            579999999999  999964211 1100 00124566766665432         3456677775          2333 


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      |...|.+++|+|+|.+|++++.|++|+        +||.+. ..++..+++|.+
T Consensus       166 ~~~~V~SlswspdG~lLat~s~D~~Ir--------IwD~Rs-g~~i~tl~gH~g  210 (568)
T PTZ00420        166 MPKKLSSLKWNIKGNLLSGTCVGKHMH--------IIDPRK-QEIASSFHIHDG  210 (568)
T ss_pred             cCCcEEEEEECCCCCEEEEEecCCEEE--------EEECCC-CcEEEEEecccC
Confidence            667899999999999999999999999        777666 445667777754

>KOG0284|consensus

Probab=99.02  E-value=3.5e-10  Score=88.17  Aligned_cols=85  Identities=16%  Similarity=0.164  Sum_probs=68.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeEE-----------ecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVKH-----------VLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~~-----------~l~gH   62 (120)
                      +++|+|+|.|..  +.|+...+..      .++.+|...+.++         -.+++.|+.+.+           .-.+|
T Consensus       276 ~N~Llt~skD~~~kv~DiR~mkEl------~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AH  349 (464)
T KOG0284|consen  276 GNWLLTGSKDQSCKVFDIRTMKEL------FTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAH  349 (464)
T ss_pred             CCeeEEccCCceEEEEehhHhHHH------HHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCccc
Confidence            489999999999  9999754443      2466787777653         345678888861           11379


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCc
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFP   95 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~   95 (120)
                      ...|++++|||-|.+|+|||.|+++|+|...+|
T Consensus       350 d~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp  382 (464)
T KOG0284|consen  350 DGEIWSLAYHPLGHILATGSNDRTVRFWTRNRP  382 (464)
T ss_pred             ccceeeeeccccceeEeecCCCcceeeeccCCC
Confidence            999999999999999999999999999998766

>KOG1332|consensus

Probab=99.02  E-value=7.7e-10  Score=81.81  Aligned_cols=104  Identities=20%  Similarity=0.125  Sum_probs=74.3

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE----------EEeccCCCeeE-------------Ee
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST----------DLFGQADAVVK-------------HV   58 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~----------~~~~~~D~~v~-------------~~   58 (120)
                      |+++|||||.|+.  ||.-.+++=...    .....|...||++          .+.++.|+.+.             +.
T Consensus        69 ~G~iLAScsYDgkVIiWke~~g~w~k~----~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki  144 (299)
T KOG1332|consen   69 FGTILASCSYDGKVIIWKEENGRWTKA----YEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKI  144 (299)
T ss_pred             cCcEeeEeecCceEEEEecCCCchhhh----hhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhh
Confidence            7999999999999  998876532111    2345677788774          34566788775             44


Q ss_pred             ccccccCeEEEEEcCC---C-----------CEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhh
Q psy75            59 LEGHDRGVNWACFHPT---L-----------PLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~---~-----------~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
                      ...|.-+|++|+|.|-   |           +.||||+.|+.||||+.      |.. -+.-=..|++|-+=+|
T Consensus       145 ~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~------~~~-~w~~e~~l~~H~dwVR  211 (299)
T KOG1332|consen  145 VFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKF------DSD-SWKLERTLEGHKDWVR  211 (299)
T ss_pred             hhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeec------CCc-chhhhhhhhhcchhhh
Confidence            5679999999999997   4           46999999999998776      432 2332334888865444

>KOG0274|consensus

Probab=99.01  E-value=1.5e-09  Score=88.41  Aligned_cols=99  Identities=20%  Similarity=0.074  Sum_probs=79.4

Q ss_pred             CCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE----------Eecccccc
Q psy75             3 AIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         3 ~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +...+++|||.|.|  +|+++++....      .+.+|...|+++      .++++.|++|+          +++.||..
T Consensus       299 ~~~~~~~sgs~D~tVkVW~v~n~~~l~------l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~  372 (537)
T KOG0274|consen  299 IDPFLLVSGSRDNTVKVWDVTNGACLN------LLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTG  372 (537)
T ss_pred             ccCceEeeccCCceEEEEeccCcceEE------EeccccccEEEEEecCCEEEEEecCceEEEEEhhhceeeeeecCCcc
Confidence            45678889999999  99998765543      455688888774      45778888775          78999999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR  116 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (120)
                      .|.++.+.+. ..++|||.|++||        +||.++...++.+|.+|.+-
T Consensus       373 ~V~sl~~~~~-~~~~Sgs~D~~Ik--------vWdl~~~~~c~~tl~~h~~~  415 (537)
T KOG0274|consen  373 RVYSLIVDSE-NRLLSGSLDTTIK--------VWDLRTKRKCIHTLQGHTSL  415 (537)
T ss_pred             eEEEEEecCc-ceEEeeeeccceE--------eecCCchhhhhhhhcCCccc
Confidence            9999999775 7899999999999        77877744788888887553

>KOG0270|consensus

Probab=98.97  E-value=3.2e-09  Score=83.35  Aligned_cols=103  Identities=15%  Similarity=0.109  Sum_probs=79.0

Q ss_pred             CCCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCCeeEEec---cc------
Q psy75             2 RAIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAVVKHVL---EG------   61 (120)
Q Consensus         2 ~~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v~~~l---~g------   61 (120)
                      +.+-+.|||||.|+|  +||++.+....      ++..|...|++         +.++|+.|++++..-   .+      
T Consensus       253 ~~~~nVLaSgsaD~TV~lWD~~~g~p~~------s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~w  326 (463)
T KOG0270|consen  253 RNFRNVLASGSADKTVKLWDVDTGKPKS------SITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEW  326 (463)
T ss_pred             cccceeEEecCCCceEEEEEcCCCCcce------ehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceE
Confidence            456689999999999  99998766543      23344555544         456788999886111   11      


Q ss_pred             -cccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhh
Q psy75            62 -HDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        62 -H~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
                       -.+.|-.|+|+|... .++++..||+++        =+|.|+.-.|+++++-|.++++
T Consensus       327 k~~g~VEkv~w~~~se~~f~~~tddG~v~--------~~D~R~~~~~vwt~~AHd~~IS  377 (463)
T KOG0270|consen  327 KFDGEVEKVAWDPHSENSFFVSTDDGTVY--------YFDIRNPGKPVWTLKAHDDEIS  377 (463)
T ss_pred             EeccceEEEEecCCCceeEEEecCCceEE--------eeecCCCCCceeEEEeccCCcc
Confidence             245688899999886 588889999999        8899998899999999999886

>KOG0277|consensus

Probab=98.96  E-value=1.9e-09  Score=80.07  Aligned_cols=81  Identities=25%  Similarity=0.262  Sum_probs=63.0

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE----------Eecccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +.+++|+.|++  |||......    |. ..+..|..+|.++         -+.+++|+++|          +++.||..
T Consensus        74 ~~~~~a~GDGSLrl~d~~~~s~----Pi-~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~  148 (311)
T KOG0277|consen   74 NQVIAASGDGSLRLFDLTMPSK----PI-HKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNS  148 (311)
T ss_pred             ceEEEEecCceEEEeccCCCCc----ch-hHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCcc
Confidence            57889999999  999643211    11 3566787777653         34568999998          78999999


Q ss_pred             CeEEEEEcCCC-CEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTL-PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~-~~laSgs~D~~iki~~   91 (120)
                      .|..++|||.. .+++|+|.|+++++|+
T Consensus       149 ~Iy~a~~sp~~~nlfas~Sgd~~l~lwd  176 (311)
T KOG0277|consen  149 CIYQAAFSPHIPNLFASASGDGTLRLWD  176 (311)
T ss_pred             EEEEEecCCCCCCeEEEccCCceEEEEE
Confidence            99999999975 5899999999999554

>KOG0285|consensus

Probab=98.95  E-value=2.6e-09  Score=82.56  Aligned_cols=81  Identities=21%  Similarity=0.245  Sum_probs=64.4

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~~   65 (120)
                      -||.||+.|+.  .||+...+...      .+-+|..+|.|+.        +.++.|.+++          .++.||.+.
T Consensus       206 pYlFs~gedk~VKCwDLe~nkvIR------~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~  279 (460)
T KOG0285|consen  206 PYLFSAGEDKQVKCWDLEYNKVIR------HYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNP  279 (460)
T ss_pred             ceEEEecCCCeeEEEechhhhhHH------HhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCc
Confidence            38999999999  99997533222      2456777777644        4566787776          688899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      |.+|.+.|..+.++|||.|.+|++|+.
T Consensus       280 V~~V~~~~~dpqvit~S~D~tvrlWDl  306 (460)
T KOG0285|consen  280 VASVMCQPTDPQVITGSHDSTVRLWDL  306 (460)
T ss_pred             ceeEEeecCCCceEEecCCceEEEeee
Confidence            999999999999999999999996554

>KOG0278|consensus

Probab=98.95  E-value=3.8e-09  Score=78.57  Aligned_cols=33  Identities=24%  Similarity=0.192  Sum_probs=31.6

Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .||.++|.||.|+|+|..-||||+||+|+||-.
T Consensus       264 kgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt  296 (334)
T KOG0278|consen  264 KGHFGPVHCVRFSPDGELYASGSEDGTIRLWQT  296 (334)
T ss_pred             cCCCCceEEEEECCCCceeeccCCCceEEEEEe
Confidence            799999999999999999999999999999876

>KOG0265|consensus

Probab=98.93  E-value=4.1e-09  Score=79.61  Aligned_cols=50  Identities=14%  Similarity=0.091  Sum_probs=41.5

Q ss_pred             EEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCc---cchhhhhhh
Q psy75            56 KHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFF---VPIAKLEKR  113 (120)
Q Consensus        56 ~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~---~~~~~~~~~  113 (120)
                      .+++.||...|+.+..+|+|..+.|-+.|++++        +||.|-|.   +++..++++
T Consensus       209 ~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvr--------vwd~rp~~p~~R~v~if~g~  261 (338)
T KOG0265|consen  209 LYTLSGHADTITGLSLSRYGSFLLSNSMDNTVR--------VWDVRPFAPSQRCVKIFQGH  261 (338)
T ss_pred             eEEeecccCceeeEEeccCCCccccccccceEE--------EEEecccCCCCceEEEeecc
Confidence            389999999999999999999999999999999        66666543   446666665

>KOG1332|consensus

Probab=98.92  E-value=5.9e-09  Score=77.17  Aligned_cols=86  Identities=12%  Similarity=-0.018  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE----------EEeccCCCeeE------------
Q psy75             1 MRAIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST----------DLFGQADAVVK------------   56 (120)
Q Consensus         1 ~~~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~----------~~~~~~D~~v~------------   56 (120)
                      |-||+..||+||.|++  |....+....   .....|.+|...+..+          ..++++|+.|.            
T Consensus        19 lDyygkrlATcsSD~tVkIf~v~~n~~s---~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~   95 (299)
T KOG1332|consen   19 LDYYGKRLATCSSDGTVKIFEVRNNGQS---KLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKA   95 (299)
T ss_pred             hhhhcceeeeecCCccEEEEEEcCCCCc---eeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhh
Confidence            4699999999999999  8888642210   1113688999887653          44667888875            


Q ss_pred             EeccccccCeEEEEEcCCC--CEEEEEeCCCCEEe
Q psy75            57 HVLEGHDRGVNWACFHPTL--PLIVSGKGLCLLDH   89 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~--~~laSgs~D~~iki   89 (120)
                      +....|.+.||+|+|-|.+  -+|++||.||+|.+
T Consensus        96 ~e~~~h~~SVNsV~wapheygl~LacasSDG~vsv  130 (299)
T KOG1332|consen   96 YEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSV  130 (299)
T ss_pred             hhhhhhcccceeecccccccceEEEEeeCCCcEEE
Confidence            4566899999999999985  57999999999995

>KOG0772|consensus

Probab=98.92  E-value=2e-09  Score=86.20  Aligned_cols=96  Identities=14%  Similarity=0.029  Sum_probs=65.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeecc---C--CCc-e-------EEEeccCCCeeE-------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHL---R--NPS-S-------TDLFGQADAVVK-------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~---~--~v~-~-------~~~~~~~D~~v~-------------   56 (120)
                      .+.++|||.|+|  |||+.+.+....     ++..-.   .  .+. |       ....+..||++.             
T Consensus       281 k~~FlT~s~DgtlRiWdv~~~k~q~q-----Vik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~  355 (641)
T KOG0772|consen  281 KEEFLTCSYDGTLRIWDVNNTKSQLQ-----VIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVM  355 (641)
T ss_pred             ccceEEecCCCcEEEEecCCchhhee-----EEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccce
Confidence            456899999999  999976433211     111110   0  111 1       111223455443             


Q ss_pred             Eecccccc--CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhh
Q psy75            57 HVLEGHDR--GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKR  113 (120)
Q Consensus        57 ~~l~gH~~--~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~  113 (120)
                      ..-.+|..  .|+||+||+||++|+|-+.|.++|        +||.|++..||-+..+-
T Consensus       356 ~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLK--------vWDLrq~kkpL~~~tgL  406 (641)
T KOG0772|consen  356 KVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLK--------VWDLRQFKKPLNVRTGL  406 (641)
T ss_pred             EeeeccCCCCceeEEEeccccchhhhccCCCcee--------eeeccccccchhhhcCC
Confidence            23347888  899999999999999999999999        99999999999877654

>KOG0647|consensus

Probab=98.91  E-value=6.1e-09  Score=78.83  Aligned_cols=82  Identities=18%  Similarity=0.115  Sum_probs=59.6

Q ss_pred             CEEEEEcCCCc--eEecCC-CceeeccCCcceEeeccCCCc--------eEEEeccCCCeeE---------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQ-LRKKNVAPGMGGLEEHLRNPS--------STDLFGQADAVVK---------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~-~~~~~~~~~~~~l~~h~~~v~--------~~~~~~~~D~~v~---------~~l~gH~~~   65 (120)
                      ++++.+|||++  +|++.. +...   |  .+...|.+.+-        +..+.++.|++++         ..+..|.++
T Consensus        41 ~~~~A~SWD~tVR~wevq~~g~~~---~--ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~p  115 (347)
T KOG0647|consen   41 NLLAAGSWDGTVRIWEVQNSGQLV---P--KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAP  115 (347)
T ss_pred             ceEEecccCCceEEEEEecCCccc---c--hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCeeeeeecccc
Confidence            57889999999  999965 2111   1  11222333332        3456777888887         566789999


Q ss_pred             eEEEEEcCCCC--EEEEEeCCCCEEecCC
Q psy75            66 VNWACFHPTLP--LIVSGKGLCLLDHGPN   92 (120)
Q Consensus        66 V~~v~fsp~~~--~laSgs~D~~iki~~~   92 (120)
                      |.++.|-+...  .|+|||+|++||+|+.
T Consensus       116 vkt~~wv~~~~~~cl~TGSWDKTlKfWD~  144 (347)
T KOG0647|consen  116 VKTCHWVPGMNYQCLVTGSWDKTLKFWDT  144 (347)
T ss_pred             eeEEEEecCCCcceeEecccccceeeccc
Confidence            99999988765  8999999999998876

>KOG0283|consensus

Probab=98.89  E-value=3.6e-09  Score=87.60  Aligned_cols=58  Identities=19%  Similarity=0.155  Sum_probs=44.7

Q ss_pred             EeeccCCCce-------EEEeccCCCeeE-------Eecc--ccccCeEEEEEcCCC-CEEEEEeCCCCEEecCC
Q psy75            35 LEEHLRNPSS-------TDLFGQADAVVK-------HVLE--GHDRGVNWACFHPTL-PLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        35 l~~h~~~v~~-------~~~~~~~D~~v~-------~~l~--gH~~~V~~v~fsp~~-~~laSgs~D~~iki~~~   92 (120)
                      |.+|.+.|-+       ..++++.|++|+       ..|.  .|..-|+||+|||.. +.|+|||-|++||||.=
T Consensus       365 f~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI  439 (712)
T KOG0283|consen  365 FKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSI  439 (712)
T ss_pred             hhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEeec
Confidence            4466655533       456788999998       2332  699999999999965 68999999999997654

>KOG0294|consensus

Probab=98.89  E-value=7.4e-09  Score=78.76  Aligned_cols=82  Identities=21%  Similarity=0.151  Sum_probs=66.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE----------eccCCCeeE----------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL----------FGQADAVVK----------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~----------~~~~D~~v~----------~~l~gH   62 (120)
                      +.++||||.|-|  |+|+......      ..+..|.+.++++.|          +++.|+.+.          .++.+|
T Consensus        53 ~~~~aSGssDetI~IYDm~k~~ql------g~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H  126 (362)
T KOG0294|consen   53 GPYVASGSSDETIHIYDMRKRKQL------GILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAH  126 (362)
T ss_pred             ceeEeccCCCCcEEEEeccchhhh------cceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeeccc
Confidence            579999999999  9999753222      256778888877654          455677663          788999


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ...|+.++.||.+++-+|.+.|++++.|+=
T Consensus       127 ~~~Vt~lsiHPS~KLALsVg~D~~lr~WNL  156 (362)
T KOG0294|consen  127 KGQVTDLSIHPSGKLALSVGGDQVLRTWNL  156 (362)
T ss_pred             ccccceeEecCCCceEEEEcCCceeeeehh
Confidence            999999999999999999999999998763

>KOG0308|consensus

Probab=98.88  E-value=7.9e-09  Score=84.42  Aligned_cols=100  Identities=14%  Similarity=0.023  Sum_probs=69.1

Q ss_pred             CEEEEEcCCCc--eEecCCCce--eeccC--CcceEe-eccCCCce--------EEEeccCCCeeE----------Eecc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRK--KNVAP--GMGGLE-EHLRNPSS--------TDLFGQADAVVK----------HVLE   60 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~--~~~~~--~~~~l~-~h~~~v~~--------~~~~~~~D~~v~----------~~l~   60 (120)
                      .++||||.|+.  +||++.+..  .....  ..+.+. ++..++++        +.+.|+.++.++          ..+.
T Consensus       131 ~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr  210 (735)
T KOG0308|consen  131 ELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR  210 (735)
T ss_pred             eeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeee
Confidence            47899999999  999986532  11010  011222 44444443        234565555554          6778


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhh
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKRE  114 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~  114 (120)
                      ||+..|..+..++||+.++|+|+|++||        +||.+- .++++++--|.
T Consensus       211 GHTdNVr~ll~~dDGt~~ls~sSDgtIr--------lWdLgq-QrCl~T~~vH~  255 (735)
T KOG0308|consen  211 GHTDNVRVLLVNDDGTRLLSASSDGTIR--------LWDLGQ-QRCLATYIVHK  255 (735)
T ss_pred             ccccceEEEEEcCCCCeEeecCCCceEE--------eeeccc-cceeeeEEecc
Confidence            9999999999999999999999999999        777665 66666665553

>KOG0293|consensus

Probab=98.88  E-value=5.5e-09  Score=81.88  Aligned_cols=50  Identities=24%  Similarity=0.255  Sum_probs=43.0

Q ss_pred             eEEEeccCCCeeE----------EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecCCC
Q psy75            44 STDLFGQADAVVK----------HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNL   93 (120)
Q Consensus        44 ~~~~~~~~D~~v~----------~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~   93 (120)
                      ....+|+.|+.|.          .++.||...||+|+|+|..+ .+||||+|+|||||...
T Consensus       453 ~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~  513 (519)
T KOG0293|consen  453 KFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS  513 (519)
T ss_pred             ceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence            3567788887764          78899999999999999886 69999999999998873

>KOG0315|consensus

Probab=98.88  E-value=1.2e-08  Score=75.73  Aligned_cols=36  Identities=8%  Similarity=0.122  Sum_probs=33.0

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ..+..|+.-+..+-||||+++||++|.|.++|||..
T Consensus       209 ~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~  244 (311)
T KOG0315|consen  209 HKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNT  244 (311)
T ss_pred             hheecccceEEEEEECCCCcEEEeecCCceEEEEec
Confidence            567789999999999999999999999999997765

>KOG0313|consensus

Probab=98.87  E-value=1.7e-08  Score=78.21  Aligned_cols=83  Identities=17%  Similarity=0.113  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce-----------EEEeccCCCeeE------------
Q psy75             2 RAIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS-----------TDLFGQADAVVK------------   56 (120)
Q Consensus         2 ~~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~-----------~~~~~~~D~~v~------------   56 (120)
                      +.-++.|+||+.|++  +||..+....       .+.+|.+.+..           .-++++.|.+++            
T Consensus       112 ~~~~~~IltgsYDg~~riWd~~Gk~~~-------~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~  184 (423)
T KOG0313|consen  112 KGASKWILTGSYDGTSRIWDLKGKSIK-------TIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVK  184 (423)
T ss_pred             cccCceEEEeecCCeeEEEecCCceEE-------EEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhh
Confidence            334789999999999  9999763332       35667665543           234567777775            


Q ss_pred             --EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 --HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 --~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                        +.-.||.++|-+|+-.++|..++|||+|.+|+||.
T Consensus       185 ~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs  221 (423)
T KOG0313|consen  185 ALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWS  221 (423)
T ss_pred             HHhHhcccccceeEEEecCCCCeEEeecccceeeecc
Confidence              22249999999999999999999999999999998

>KOG0302|consensus

Probab=98.86  E-value=1.3e-08  Score=78.96  Aligned_cols=82  Identities=13%  Similarity=0.032  Sum_probs=61.5

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCeeE-------------Eecccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVVK-------------HVLEGH   62 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v~-------------~~l~gH   62 (120)
                      +.++|||.|++  |||+.++.++..    .....|...||-        +..+|+.||+++             ..|.-|
T Consensus       271 ~vfaScS~DgsIrIWDiRs~~~~~~----~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~H  346 (440)
T KOG0302|consen  271 GVFASCSCDGSIRIWDIRSGPKKAA----VSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYH  346 (440)
T ss_pred             ceEEeeecCceEEEEEecCCCccce----eEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEec
Confidence            57999999999  999986533211    134566666664        345777888875             366779


Q ss_pred             ccCeEEEEEcCCC-CEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTL-PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~-~~laSgs~D~~iki~~   91 (120)
                      ..+|++|.|||.. ..|+.++.|..|.||+
T Consensus       347 k~pItsieW~p~e~s~iaasg~D~QitiWD  376 (440)
T KOG0302|consen  347 KAPITSIEWHPHEDSVIAASGEDNQITIWD  376 (440)
T ss_pred             cCCeeEEEeccccCceEEeccCCCcEEEEE
Confidence            9999999999986 4688888999999554

>KOG0264|consensus

Probab=98.86  E-value=1.1e-08  Score=80.20  Aligned_cols=82  Identities=20%  Similarity=0.158  Sum_probs=64.5

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE-----------Eeccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK-----------HVLEGHD   63 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~-----------~~l~gH~   63 (120)
                      ++++|++.|+.  |||+.+.    ..+.......|.+.++|+.|         .++.|++|.           +++.+|.
T Consensus       241 ~lF~sv~dd~~L~iwD~R~~----~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~  316 (422)
T KOG0264|consen  241 DLFGSVGDDGKLMIWDTRSN----TSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHE  316 (422)
T ss_pred             hhheeecCCCeEEEEEcCCC----CCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCC
Confidence            46789999999  9999752    11112356788888888654         567788875           7889999


Q ss_pred             cCeEEEEEcCCC-CEEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHPTL-PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~-~~laSgs~D~~iki~~   91 (120)
                      ..|.+|.|||.. +.|||++.|+++.+|+
T Consensus       317 dev~~V~WSPh~etvLASSg~D~rl~vWD  345 (422)
T KOG0264|consen  317 DEVFQVEWSPHNETVLASSGTDRRLNVWD  345 (422)
T ss_pred             cceEEEEeCCCCCceeEecccCCcEEEEe
Confidence            999999999987 5799999999999543

>KOG0292|consensus

Probab=98.84  E-value=7.8e-09  Score=87.05  Aligned_cols=80  Identities=29%  Similarity=0.196  Sum_probs=65.2

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~~   65 (120)
                      .+.+||+.|.+  +|+..+.++..      ++.+|..-|..+        .++++.|.+++          -+++||+--
T Consensus        64 plFVSGGDDykIkVWnYk~rrclf------tL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHY  137 (1202)
T KOG0292|consen   64 PLFVSGGDDYKIKVWNYKTRRCLF------TLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHY  137 (1202)
T ss_pred             CeEEecCCccEEEEEecccceehh------hhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceE
Confidence            47899999999  99998766543      566777655443        45677888886          688899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |.|.+|||...+|||+|-|.|||+|+
T Consensus       138 VMcAqFhptEDlIVSaSLDQTVRVWD  163 (1202)
T KOG0292|consen  138 VMCAQFHPTEDLIVSASLDQTVRVWD  163 (1202)
T ss_pred             EEeeccCCccceEEEecccceEEEEe
Confidence            99999999999999999999999543

>KOG2096|consensus

Probab=98.83  E-value=1.7e-08  Score=77.26  Aligned_cols=86  Identities=12%  Similarity=0.030  Sum_probs=57.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCC--c-----------eEEEe---ccCCCeeE-----Eeccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNP--S-----------STDLF---GQADAVVK-----HVLEG   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v--~-----------~~~~~---~~~D~~v~-----~~l~g   61 (120)
                      +.+|+|||.|.+  ||++.+.....+..  +....|...+  +           ++.+|   -+.||++.     ..|.|
T Consensus       199 ~k~imsas~dt~i~lw~lkGq~L~~idt--nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkG  276 (420)
T KOG2096|consen  199 AKYIMSASLDTKICLWDLKGQLLQSIDT--NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKG  276 (420)
T ss_pred             ceEEEEecCCCcEEEEecCCceeeeecc--ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheecc
Confidence            568999999999  99997421111110  1111111111  1           11111   12355543     67889


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      |.++|.+.+|||+.+.++|.|.||++|||+.
T Consensus       277 H~saV~~~aFsn~S~r~vtvSkDG~wriwdt  307 (420)
T KOG2096|consen  277 HQSAVLAAAFSNSSTRAVTVSKDGKWRIWDT  307 (420)
T ss_pred             chhheeeeeeCCCcceeEEEecCCcEEEeec
Confidence            9999999999999999999999999999987

>KOG0295|consensus

Probab=98.83  E-value=2.1e-08  Score=77.36  Aligned_cols=79  Identities=19%  Similarity=0.094  Sum_probs=66.8

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEe--------ccCCCeeE----------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF--------GQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~--------~~~D~~v~----------~~l~gH~~~   65 (120)
                      ++|+|+|.|+|  +||+..+.+..      ++.+|..+|..+.|+        ...|++++          +++..|.--
T Consensus       305 ~~l~s~SrDktIk~wdv~tg~cL~------tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hf  378 (406)
T KOG0295|consen  305 QVLGSGSRDKTIKIWDVSTGMCLF------TLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHF  378 (406)
T ss_pred             cEEEeecccceEEEEeccCCeEEE------EEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcce
Confidence            58999999999  99999876653      688999888776554        34677765          677899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      |++++||-+-+.++|||-|.++|+|
T Consensus       379 vt~lDfh~~~p~VvTGsVdqt~Kvw  403 (406)
T KOG0295|consen  379 VTSLDFHKTAPYVVTGSVDQTVKVW  403 (406)
T ss_pred             eEEEecCCCCceEEeccccceeeee
Confidence            9999999999999999999999965

>KOG0303|consensus

Probab=98.83  E-value=1.1e-08  Score=79.89  Aligned_cols=85  Identities=16%  Similarity=0.013  Sum_probs=60.6

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCc-ceEeeccCCCceEE---------EeccCCCeeE----------Eeccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGM-GGLEEHLRNPSSTD---------LFGQADAVVK----------HVLEGHD   63 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~-~~l~~h~~~v~~~~---------~~~~~D~~v~----------~~l~gH~   63 (120)
                      +.|||||.|.+  +|++...........+ ..|.+|...|.-+.         ++++.|.++.          .++. |.
T Consensus        95 ~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hp  173 (472)
T KOG0303|consen   95 CVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HP  173 (472)
T ss_pred             ceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CC
Confidence            46899999999  9999632221111112 35778887665433         3455566654          4454 99


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..|.+++||.||.+|+|.+.|++||||+
T Consensus       174 d~i~S~sfn~dGs~l~TtckDKkvRv~d  201 (472)
T KOG0303|consen  174 DMVYSMSFNRDGSLLCTTCKDKKVRVID  201 (472)
T ss_pred             CeEEEEEeccCCceeeeecccceeEEEc
Confidence            9999999999999999999999999443

>KOG0265|consensus

Probab=98.82  E-value=1.8e-08  Score=76.27  Aligned_cols=93  Identities=20%  Similarity=0.030  Sum_probs=67.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +.++|||+.|..  +|+..+.++..     .++.+|++.|..        ..++++.|++++          +.+.+|..
T Consensus        59 gs~~aSgG~Dr~I~LWnv~gdceN~-----~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~  133 (338)
T KOG0265|consen   59 GSCFASGGSDRAIVLWNVYGDCENF-----WVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTS  133 (338)
T ss_pred             CCeEeecCCcceEEEEeccccccce-----eeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccc
Confidence            468999999999  99986543322     245567665543        456777777765          77889999


Q ss_pred             CeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhh
Q psy75            65 GVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        65 ~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~  111 (120)
                      -||++.-+..|. ++.||+.|+++|        +||+|. ..++.+++
T Consensus       134 ~vNs~~p~rrg~~lv~SgsdD~t~k--------l~D~R~-k~~~~t~~  172 (338)
T KOG0265|consen  134 FVNSLDPSRRGPQLVCSGSDDGTLK--------LWDIRK-KEAIKTFE  172 (338)
T ss_pred             eeeecCccccCCeEEEecCCCceEE--------EEeecc-cchhhccc
Confidence            999999655564 789999999999        888775 44555553

>KOG0318|consensus

Probab=98.82  E-value=2.2e-08  Score=80.32  Aligned_cols=80  Identities=10%  Similarity=0.070  Sum_probs=60.2

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec--------cCCCeeE----------Eecc---cc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG--------QADAVVK----------HVLE---GH   62 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~--------~~D~~v~----------~~l~---gH   62 (120)
                      -.++|||.|++  +++=...+=      ..++..|...|+|+.+++        +.|+++.          ..|.   +|
T Consensus       161 fRi~T~sdDn~v~ffeGPPFKF------k~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aH  234 (603)
T KOG0318|consen  161 FRIATGSDDNTVAFFEGPPFKF------KSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAH  234 (603)
T ss_pred             eEEEeccCCCeEEEeeCCCeee------eecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCc
Confidence            36899999998  665322111      136778999999987643        3455443          5565   89


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .+.|.+++|+||++.++|+|.|.++|||+
T Consensus       235 kGsIfalsWsPDs~~~~T~SaDkt~KIWd  263 (603)
T KOG0318|consen  235 KGSIFALSWSPDSTQFLTVSADKTIKIWD  263 (603)
T ss_pred             cccEEEEEECCCCceEEEecCCceEEEEE
Confidence            99999999999999999999999999654

>KOG1034|consensus

Probab=98.81  E-value=1.7e-08  Score=77.24  Aligned_cols=60  Identities=27%  Similarity=0.125  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEe
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGK   82 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs   82 (120)
                      +++|+|||.|.+  +|++.+..                   |+.++|+        ++||...|.+|.||++|..|+||+
T Consensus       148 ~qlvls~SkD~svRlwnI~~~~-------------------Cv~VfGG--------~egHrdeVLSvD~~~~gd~i~ScG  200 (385)
T KOG1034|consen  148 PQLVLSASKDHSVRLWNIQTDV-------------------CVAVFGG--------VEGHRDEVLSVDFSLDGDRIASCG  200 (385)
T ss_pred             CcEEEEecCCceEEEEeccCCe-------------------EEEEecc--------cccccCcEEEEEEcCCCCeeeccC
Confidence            579999999999  99997532                   3355554        568999999999999999999999


Q ss_pred             CCCCEEecC
Q psy75            83 GLCLLDHGP   91 (120)
Q Consensus        83 ~D~~iki~~   91 (120)
                      .|.+|++|.
T Consensus       201 mDhslk~W~  209 (385)
T KOG1034|consen  201 MDHSLKLWR  209 (385)
T ss_pred             CcceEEEEe
Confidence            999999543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.81  E-value=5e-08  Score=82.34  Aligned_cols=97  Identities=15%  Similarity=0.055  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE----------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK----------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~----------~~l~gH~   63 (120)
                      .++||||+.|++  +||+.++....      .+.+|...|.++         .++++.|++++          .++.. .
T Consensus       545 ~~~las~~~Dg~v~lWd~~~~~~~~------~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~-~  617 (793)
T PLN00181        545 KSQVASSNFEGVVQVWDVARSQLVT------EMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-K  617 (793)
T ss_pred             CCEEEEEeCCCeEEEEECCCCeEEE------EecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec-C
Confidence            578999999999  99997654332      345566555543         34556677775          33433 3


Q ss_pred             cCeEEEEEc-CCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75            64 RGVNWACFH-PTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR  116 (120)
Q Consensus        64 ~~V~~v~fs-p~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (120)
                      ..|.+++|+ +++..|++|+.|++|+        +||.++...|+..+.+|...
T Consensus       618 ~~v~~v~~~~~~g~~latgs~dg~I~--------iwD~~~~~~~~~~~~~h~~~  663 (793)
T PLN00181        618 ANICCVQFPSESGRSLAFGSADHKVY--------YYDLRNPKLPLCTMIGHSKT  663 (793)
T ss_pred             CCeEEEEEeCCCCCEEEEEeCCCeEE--------EEECCCCCccceEecCCCCC
Confidence            679999995 4688999999999999        66666655566666666543

>KOG0305|consensus

Probab=98.76  E-value=3.4e-08  Score=79.33  Aligned_cols=35  Identities=26%  Similarity=0.220  Sum_probs=32.5

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..+.||...|..+++||||..|++|+.|.|+++|+
T Consensus       425 ~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~  459 (484)
T KOG0305|consen  425 AELLGHTSRVLYLALSPDGETIVTGAADETLRFWN  459 (484)
T ss_pred             eeecCCcceeEEEEECCCCCEEEEecccCcEEecc
Confidence            46779999999999999999999999999999776

>KOG0267|consensus

Probab=98.74  E-value=1e-08  Score=84.52  Aligned_cols=81  Identities=22%  Similarity=0.224  Sum_probs=60.7

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE------e--ccCCCe----------eEEeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL------F--GQADAV----------VKHVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~------~--~~~D~~----------v~~~l~gH~~~   65 (120)
                      .+|++|+.|++  +||+...+..      .+|.+|...+..++|      +  ++.|..          +.+.+.+|...
T Consensus        83 ~LlaagsasgtiK~wDleeAk~v------rtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~v  156 (825)
T KOG0267|consen   83 RLLAAGSASGTIKVWDLEEAKIV------RTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRV  156 (825)
T ss_pred             hhhcccccCCceeeeehhhhhhh------hhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcce
Confidence            46889999999  9999754433      246667665555443      2  333322          23788899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      |..+.|+|+|+++++|++|++++||+-
T Consensus       157 v~~l~lsP~Gr~v~~g~ed~tvki~d~  183 (825)
T KOG0267|consen  157 VDVLRLSPDGRWVASGGEDNTVKIWDL  183 (825)
T ss_pred             eEEEeecCCCceeeccCCcceeeeecc
Confidence            999999999999999999999997665

>KOG0643|consensus

Probab=98.74  E-value=2.4e-08  Score=74.77  Aligned_cols=78  Identities=17%  Similarity=0.126  Sum_probs=53.7

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeE---------------------------
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVK---------------------------   56 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~---------------------------   56 (120)
                      .+.+++|.|.+  +||..+.......      . ....+|+..+++..|..+.                           
T Consensus       203 T~FiT~s~Dttakl~D~~tl~v~Kty------~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i  275 (327)
T KOG0643|consen  203 TYFITGSKDTTAKLVDVRTLEVLKTY------T-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLI  275 (327)
T ss_pred             ceEEecccCccceeeeccceeeEEEe------e-ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHH
Confidence            47899999999  9999875443321      1 1223344333322221111                           


Q ss_pred             -----EeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            57 -----HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        57 -----~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                           -.+.||-++||+|+|||+|+..+||++|+.|++.
T Consensus       276 ~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h  314 (327)
T KOG0643|consen  276 FEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLH  314 (327)
T ss_pred             HHHHhccccccccCcceeEECCCCcccccCCCCceEEEE
Confidence                 3567999999999999999999999999999964

>KOG1036|consensus

Probab=98.73  E-value=8.2e-08  Score=72.70  Aligned_cols=86  Identities=17%  Similarity=0.077  Sum_probs=58.3

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceE-eeccCCCceEEEeccCCCeeE---------EeccccccCeEEEEEcC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGL-EEHLRNPSSTDLFGQADAVVK---------HVLEGHDRGVNWACFHP   73 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l-~~h~~~v~~~~~~~~~D~~v~---------~~l~gH~~~V~~v~fsp   73 (120)
                      +.|+.+|||++  ++|+.....+....+...+ ....... ...++++.|++++         ..+..|..+|.++.+++
T Consensus        26 ~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~  104 (323)
T KOG1036|consen   26 SDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSY  104 (323)
T ss_pred             CcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCC-ceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeec
Confidence            56777789999  9998753221111111111 1111121 2367788899987         45667999999999999


Q ss_pred             CCCEEEEEeCCCCEEecCC
Q psy75            74 TLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        74 ~~~~laSgs~D~~iki~~~   92 (120)
                      -...++|||||++||+|+-
T Consensus       105 ~~~~vIsgsWD~~ik~wD~  123 (323)
T KOG1036|consen  105 EVGCVISGSWDKTIKFWDP  123 (323)
T ss_pred             cCCeEEEcccCccEEEEec
Confidence            8889999999999997654

>KOG0289|consensus

Probab=98.73  E-value=9.1e-08  Score=75.41  Aligned_cols=84  Identities=18%  Similarity=0.149  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeecc-C--CCceEEE--------eccCCCeeE----------Eecc
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHL-R--NPSSTDL--------FGQADAVVK----------HVLE   60 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~-~--~v~~~~~--------~~~~D~~v~----------~~l~   60 (120)
                      -+.||+++|.|++  +-|+..++.....       .+. .  .+.+..|        .++.|+.++          ..|.
T Consensus       314 tgeYllsAs~d~~w~Fsd~~~g~~lt~v-------s~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fp  386 (506)
T KOG0289|consen  314 TGEYLLSASNDGTWAFSDISSGSQLTVV-------SDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFP  386 (506)
T ss_pred             CCcEEEEecCCceEEEEEccCCcEEEEE-------eeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCC
Confidence            3689999999999  7788776543221       111 1  1112111        234566665          6788


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSD  102 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~  102 (120)
                      ||+++|.+|+|+-+|-++|++++|+.|+        +||.|.
T Consensus       387 ght~~vk~i~FsENGY~Lat~add~~V~--------lwDLRK  420 (506)
T KOG0289|consen  387 GHTGPVKAISFSENGYWLATAADDGSVK--------LWDLRK  420 (506)
T ss_pred             CCCCceeEEEeccCceEEEEEecCCeEE--------EEEehh
Confidence            9999999999999999999999999999        778664

>KOG0306|consensus

Probab=98.73  E-value=5.2e-08  Score=80.83  Aligned_cols=84  Identities=17%  Similarity=0.082  Sum_probs=68.8

Q ss_pred             CCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------Eecccc
Q psy75             3 AIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLEGH   62 (120)
Q Consensus         3 ~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~gH   62 (120)
                      +=.++|++||.|+.  +|-++-+.+.      .++-+|...|.++.|        +++.|+.++          +++.||
T Consensus       560 ~DSklivTgSADKnVKiWGLdFGDCH------KS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H  633 (888)
T KOG0306|consen  560 PDSKLIVTGSADKNVKIWGLDFGDCH------KSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGH  633 (888)
T ss_pred             CCcCeEEeccCCCceEEeccccchhh------hhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccc
Confidence            44679999999999  9988755443      357778888777543        456788887          688899


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ...|++++-+|+|..++|+|-|.+|++|-.
T Consensus       634 ~~ev~cLav~~~G~~vvs~shD~sIRlwE~  663 (888)
T KOG0306|consen  634 HSEVWCLAVSPNGSFVVSSSHDKSIRLWER  663 (888)
T ss_pred             hheeeeeEEcCCCCeEEeccCCceeEeeec
Confidence            999999999999999999999999996655

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.71  E-value=1.1e-07  Score=80.21  Aligned_cols=84  Identities=15%  Similarity=0.059  Sum_probs=62.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE-------EEeccCCCeeE----------------Eec
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST-------DLFGQADAVVK----------------HVL   59 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~-------~~~~~~D~~v~----------------~~l   59 (120)
                      +++|++|+.|++  +||+.+.....     ..+.+|...+.++       .++++.|++++                .++
T Consensus       630 g~~latgs~dg~I~iwD~~~~~~~~-----~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~  704 (793)
T PLN00181        630 GRSLAFGSADHKVYYYDLRNPKLPL-----CTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSF  704 (793)
T ss_pred             CCEEEEEeCCCeEEEEECCCCCccc-----eEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEE
Confidence            578999999999  99997533110     1344555554443       23445566554                467


Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEecCCC
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNL   93 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~   93 (120)
                      .+|...+++++|+|++++||+|+.|++|++|+..
T Consensus       705 ~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~  738 (793)
T PLN00181        705 MGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKA  738 (793)
T ss_pred             cCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECC
Confidence            7999999999999999999999999999998863

>KOG0282|consensus

Probab=98.68  E-value=6.2e-08  Score=76.87  Aligned_cols=92  Identities=15%  Similarity=-0.012  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCc---ceEeeccCCCceEEEeccCCCeeE----------EeccccccCeEEE
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGM---GGLEEHLRNPSSTDLFGQADAVVK----------HVLEGHDRGVNWA   69 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~---~~l~~h~~~v~~~~~~~~~D~~v~----------~~l~gH~~~V~~v   69 (120)
                      +..++|+|.|++  +||.++++........   ....-|-.. ..+-+.|+.|+.++          +.+..|-+.|+.+
T Consensus       270 g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~-~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i  348 (503)
T KOG0282|consen  270 GTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDN-QNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDI  348 (503)
T ss_pred             CCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCC-CcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeee
Confidence            467899999999  9999987765322110   112222222 23445677787776          4556799999999


Q ss_pred             EEcCCCCEEEEEeCCCCEEecCCCCceE
Q psy75            70 CFHPTLPLIVSGKGLCLLDHGPNLFPVV   97 (120)
Q Consensus        70 ~fsp~~~~laSgs~D~~iki~~~~~~~~   97 (120)
                      .|-|+|+.++|.|+|++++||.+..|+.
T Consensus       349 ~F~~~g~rFissSDdks~riWe~~~~v~  376 (503)
T KOG0282|consen  349 TFVDEGRRFISSSDDKSVRIWENRIPVP  376 (503)
T ss_pred             EEccCCceEeeeccCccEEEEEcCCCcc
Confidence            9999999999999999999999988876

>KOG0275|consensus

Probab=98.67  E-value=2.9e-08  Score=76.34  Aligned_cols=85  Identities=13%  Similarity=0.048  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCC--cceEeeccCCCceEEEe--------ccCCCeeE----------Eecc-c
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPG--MGGLEEHLRNPSSTDLF--------GQADAVVK----------HVLE-G   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~--~~~l~~h~~~v~~~~~~--------~~~D~~v~----------~~l~-g   61 (120)
                      ++||+|||-|+-  +||..+++.+.....  ...|--+...|-|+.|+        |+.||.++          ..|. +
T Consensus       225 gqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrA  304 (508)
T KOG0275|consen  225 GQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRA  304 (508)
T ss_pred             CceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhh
Confidence            689999999999  999877654433221  12455556667776654        56788876          3343 7


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEe
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDH   89 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki   89 (120)
                      |+.+|+++.||.|+..+.|+|.|.+++|
T Consensus       305 HtkGvt~l~FSrD~SqiLS~sfD~tvRi  332 (508)
T KOG0275|consen  305 HTKGVTCLSFSRDNSQILSASFDQTVRI  332 (508)
T ss_pred             hccCeeEEEEccCcchhhcccccceEEE
Confidence            9999999999999999999999999997

>KOG0973|consensus

Probab=98.66  E-value=6.4e-08  Score=82.18  Aligned_cols=105  Identities=18%  Similarity=0.140  Sum_probs=76.8

Q ss_pred             CCCEEEEEc--CCCc--eEecCCCc----eeec-cCCc-ceEeeccCCCceEEEe--------ccCCCe-----------
Q psy75             4 IFRLVLSST--PDHH--HKQNAQLR----KKNV-APGM-GGLEEHLRNPSSTDLF--------GQADAV-----------   54 (120)
Q Consensus         4 ~~~~L~S~s--~D~t--lWdi~~~~----~~~~-~~~~-~~l~~h~~~v~~~~~~--------~~~D~~-----------   54 (120)
                      .+..+|||+  .|+.  +|+.....    .... .|.+ .+...|.+.++|+.++        |+.|..           
T Consensus        24 dg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~  103 (942)
T KOG0973|consen   24 DGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGS  103 (942)
T ss_pred             CceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCC
Confidence            356788999  8888  99875421    1111 1222 3566888889887543        333322           


Q ss_pred             -----------------eEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            55 -----------------VKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        55 -----------------v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                                       ++.++.+|.+.|..|+|+|++.++||+|.|++|.        +|+.+.| +.+++|++|.+-+
T Consensus       104 ~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsVi--------iwn~~tF-~~~~vl~~H~s~V  174 (942)
T KOG0973|consen  104 GTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVI--------IWNAKTF-ELLKVLRGHQSLV  174 (942)
T ss_pred             cccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEE--------EEccccc-eeeeeeecccccc
Confidence                             2267889999999999999999999999999999        7777887 7799999996543

>KOG0642|consensus

Probab=98.66  E-value=7.2e-08  Score=77.66  Aligned_cols=85  Identities=15%  Similarity=0.125  Sum_probs=65.1

Q ss_pred             EEEEEcCCCc--eEecCC---CceeeccCCcceEeeccCCCceEE--------EeccCCCeeE-----------------
Q psy75             7 LVLSSTPDHH--HKQNAQ---LRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK-----------------   56 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~---~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~-----------------   56 (120)
                      -|++|+.|++  +|++..   .......| ..+|.+|.+.|-|+.        ++++.|++++                 
T Consensus       308 ~lit~sed~~lk~WnLqk~~~s~~~~~ep-i~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~  386 (577)
T KOG0642|consen  308 VLITASEDGTLKLWNLQKAKKSAEKDVEP-ILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPS  386 (577)
T ss_pred             eEEEeccccchhhhhhcccCCccccceee-eEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcc
Confidence            6899999999  999832   11111111 147899999887743        4566777665                 


Q ss_pred             ---EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 ---HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ---~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                         .++.||+..|+.+++|+....|+|||.|+|++.|.-
T Consensus       387 vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~  425 (577)
T KOG0642|consen  387 VLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEP  425 (577)
T ss_pred             hhccceeccccceeeeeecccccceeeecCCceEEeecc
Confidence               577899999999999999889999999999999864

>KOG1407|consensus

Probab=98.65  E-value=1.9e-07  Score=69.78  Aligned_cols=36  Identities=14%  Similarity=0.151  Sum_probs=33.1

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +++.+|+....||.|+|+|+.+|+||.|..+.+|+=
T Consensus       183 ~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~  218 (313)
T KOG1407|consen  183 QSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDV  218 (313)
T ss_pred             cccccCCcceEEEEECCCCceEeeccccceeeccCh
Confidence            788899999999999999999999999999996654

>KOG0268|consensus

Probab=98.61  E-value=8.1e-08  Score=74.37  Aligned_cols=58  Identities=9%  Similarity=-0.019  Sum_probs=44.3

Q ss_pred             EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecCC---------------------------------CCceEeeCCC
Q psy75            57 HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPN---------------------------------LFPVVLDSSD  102 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~---------------------------------~~~~~~~~~~  102 (120)
                      .++..-...|.++.|||..+ +|+||.+|+.|.+++-                                 --.|+||+|+
T Consensus       181 ~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~  260 (433)
T KOG0268|consen  181 SSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRN  260 (433)
T ss_pred             ceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhh
Confidence            34444566789999999875 7899989999988542                                 1246789999


Q ss_pred             Cccchhhhhhhh
Q psy75           103 FFVPIAKLEKRE  114 (120)
Q Consensus       103 ~~~~~~~~~~~~  114 (120)
                      +..|+....+|-
T Consensus       261 l~~p~~v~~dhv  272 (433)
T KOG0268|consen  261 LSRPLNVHKDHV  272 (433)
T ss_pred             hcccchhhcccc
Confidence            999999888873

>KOG0646|consensus

Probab=98.59  E-value=3.1e-07  Score=72.68  Aligned_cols=35  Identities=20%  Similarity=0.213  Sum_probs=32.0

Q ss_pred             Eecccccc--CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 HVLEGHDR--GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~--~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..+.||.+  .|+|++.+-||.+|+||+.|+++.+|+
T Consensus       269 ~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWd  305 (476)
T KOG0646|consen  269 NVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWD  305 (476)
T ss_pred             eeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEe
Confidence            67889999  999999999999999999999999543

>KOG0302|consensus

Probab=98.57  E-value=1.4e-07  Score=73.30  Aligned_cols=88  Identities=18%  Similarity=0.206  Sum_probs=64.3

Q ss_pred             eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCCeeE------------EeccccccCeEEEEEcCCC
Q psy75            17 HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAVVK------------HVLEGHDRGVNWACFHPTL   75 (120)
Q Consensus        17 lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v~------------~~l~gH~~~V~~v~fsp~~   75 (120)
                      +|...++.=. .-  ...|.+|...|-.         +-++++.|++++            ....+|.+.||.|+||...
T Consensus       238 lw~~~~g~W~-vd--~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~  314 (440)
T KOG0302|consen  238 LWEPSTGSWK-VD--QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRRE  314 (440)
T ss_pred             eeeeccCcee-ec--CccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCc
Confidence            8877653211 11  1246667776643         445667788886            3446899999999999999


Q ss_pred             CEEEEEeCCCCEEecCCCCceEeeCCCCc--cchhhhhhhhh
Q psy75            76 PLIVSGKGLCLLDHGPNLFPVVLDSSDFF--VPIAKLEKREG  115 (120)
Q Consensus        76 ~~laSgs~D~~iki~~~~~~~~~~~~~~~--~~~~~~~~~~~  115 (120)
                      ++||||++||+++        +||.|.|.  .|+|.|+-|..
T Consensus       315 ~lLasG~DdGt~~--------iwDLR~~~~~~pVA~fk~Hk~  348 (440)
T KOG0302|consen  315 PLLASGGDDGTLS--------IWDLRQFKSGQPVATFKYHKA  348 (440)
T ss_pred             ceeeecCCCceEE--------EEEhhhccCCCcceeEEeccC
Confidence            9999999999999        88888765  67888887754

>KOG0300|consensus

Probab=98.56  E-value=1.8e-07  Score=71.80  Aligned_cols=96  Identities=13%  Similarity=0.048  Sum_probs=70.6

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec--------cCC-----------------------
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG--------QAD-----------------------   52 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~--------~~D-----------------------   52 (120)
                      ..+.++|.|.|  ||.++++++..      .+.+|.+.||++.|+.        +.|                       
T Consensus       161 pi~gtASADhTA~iWs~Esg~CL~------~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~h  234 (481)
T KOG0300|consen  161 PICGTASADHTARIWSLESGACLA------TYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDH  234 (481)
T ss_pred             cceeecccccceeEEeecccccee------eecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCC
Confidence            36789999999  99998877653      4667888888754421        111                       


Q ss_pred             ------------------------CeeE---EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCcc
Q psy75            53 ------------------------AVVK---HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFV  105 (120)
Q Consensus        53 ------------------------~~v~---~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~  105 (120)
                                              .+++   ..|.||.+.|.+..|---|+.++++|+|++..        +||+-. -.
T Consensus       235 SsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAn--------lwDVEt-ge  305 (481)
T KOG0300|consen  235 SSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTAN--------LWDVET-GE  305 (481)
T ss_pred             CchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccce--------eeeecc-Cc
Confidence                                    1122   67789999999999999999999999999999        566443 55


Q ss_pred             chhhhhhhhhh
Q psy75           106 PIAKLEKREGR  116 (120)
Q Consensus       106 ~~~~~~~~~~~  116 (120)
                      ++..|-||+.|
T Consensus       306 ~v~~LtGHd~E  316 (481)
T KOG0300|consen  306 VVNILTGHDSE  316 (481)
T ss_pred             eeccccCcchh
Confidence            66666666554

>KOG0772|consensus

Probab=98.56  E-value=1.6e-07  Score=75.49  Aligned_cols=47  Identities=15%  Similarity=0.209  Sum_probs=37.6

Q ss_pred             EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhh
Q psy75            57 HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~  111 (120)
                      +.-.||.+.++|.+|||+.+ .++|+|.|+++|        +||+.+...-+++++
T Consensus       262 ~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlR--------iWdv~~~k~q~qVik  309 (641)
T KOG0772|consen  262 YNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLR--------IWDVNNTKSQLQVIK  309 (641)
T ss_pred             hccCCceeeeeccccccCcccceEEecCCCcEE--------EEecCCchhheeEEe
Confidence            34469999999999999985 799999999999        667677655555544

>KOG1446|consensus

Probab=98.56  E-value=1e-06  Score=66.81  Aligned_cols=83  Identities=13%  Similarity=0.112  Sum_probs=56.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCc------ceEeeccCCCceEEEecc--CCCee----------EEecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGM------GGLEEHLRNPSSTDLFGQ--ADAVV----------KHVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~------~~l~~h~~~v~~~~~~~~--~D~~v----------~~~l~gH~~   64 (120)
                      |.+|++++.|-+  |+|..+++.....+..      ..|..|   .++ .+.++  .|.++          .+-|.||..
T Consensus        26 G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~---~~~-~i~sStk~d~tIryLsl~dNkylRYF~GH~~  101 (311)
T KOG1446|consen   26 GLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHH---SNT-VIHSSTKEDDTIRYLSLHDNKYLRYFPGHKK  101 (311)
T ss_pred             CCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecC---Cce-EEEccCCCCCceEEEEeecCceEEEcCCCCc
Confidence            568888888877  9999776554332221      112222   222 22222  14444          378899999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|++++-+|-+..++|+|.|++|++|+
T Consensus       102 ~V~sL~~sP~~d~FlS~S~D~tvrLWD  128 (311)
T KOG1446|consen  102 RVNSLSVSPKDDTFLSSSLDKTVRLWD  128 (311)
T ss_pred             eEEEEEecCCCCeEEecccCCeEEeeE
Confidence            999999999999999999999999554

>KOG0640|consensus

Probab=98.56  E-value=3.3e-07  Score=70.13  Aligned_cols=32  Identities=13%  Similarity=0.051  Sum_probs=29.3

Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +|+.+|++|.+|+.+++-++||.||.||||+-
T Consensus       259 qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDG  290 (430)
T KOG0640|consen  259 QHTGAITQVRYSSTGSLYVTASKDGAIKLWDG  290 (430)
T ss_pred             ccccceeEEEecCCccEEEEeccCCcEEeecc
Confidence            69999999999999999999999999996554

>PTZ00421 coronin; Provisional

Probab=98.56  E-value=8.2e-07  Score=71.87  Aligned_cols=80  Identities=11%  Similarity=-0.009  Sum_probs=55.2

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~~   65 (120)
                      ++|+|||.|++  +||+.++....      .+.+|...+.++        .++++.|++++          .++.+|...
T Consensus       139 ~iLaSgs~DgtVrIWDl~tg~~~~------~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~  212 (493)
T PTZ00421        139 NVLASAGADMVVNVWDVERGKAVE------VIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA  212 (493)
T ss_pred             CEEEEEeCCCEEEEEECCCCeEEE------EEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC
Confidence            68999999999  99998654332      344565555543        33455677765          566788765


Q ss_pred             -eEEEEEcCCCCEEEEEe----CCCCEEecC
Q psy75            66 -VNWACFHPTLPLIVSGK----GLCLLDHGP   91 (120)
Q Consensus        66 -V~~v~fsp~~~~laSgs----~D~~iki~~   91 (120)
                       +..+.|+|++..|++++    .|+.|++|+
T Consensus       213 ~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWD  243 (493)
T PTZ00421        213 KSQRCLWAKRKDLIITLGCSKSQQRQIMLWD  243 (493)
T ss_pred             cceEEEEcCCCCeEEEEecCCCCCCeEEEEe
Confidence             45788999988777654    478999444

>KOG0305|consensus

Probab=98.55  E-value=2.1e-07  Score=74.90  Aligned_cols=98  Identities=16%  Similarity=0.061  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEee-ccCCCce------EEEeccCCCeeE-----------Eeccccc
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEE-HLRNPSS------TDLFGQADAVVK-----------HVLEGHD   63 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~-h~~~v~~------~~~~~~~D~~v~-----------~~l~gH~   63 (120)
                      -|++||.|-.+++  |||....+...      .+.. |...+.+      +..+|+.|+.+.           .++.+|.
T Consensus       228 ~G~~LavG~~~g~v~iwD~~~~k~~~------~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~  301 (484)
T KOG0305|consen  228 DGSHLAVGTSDGTVQIWDVKEQKKTR------TLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHR  301 (484)
T ss_pred             CCCEEEEeecCCeEEEEehhhccccc------cccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhccc
Confidence            3789999999999  99986543322      2333 5544443      334566666654           3477899


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR  116 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (120)
                      ..|..++|++|+..+|||+.|+.+.||+-        .. ..|+-.+.+|...
T Consensus       302 qeVCgLkws~d~~~lASGgnDN~~~Iwd~--------~~-~~p~~~~~~H~aA  345 (484)
T KOG0305|consen  302 QEVCGLKWSPDGNQLASGGNDNVVFIWDG--------LS-PEPKFTFTEHTAA  345 (484)
T ss_pred             ceeeeeEECCCCCeeccCCCccceEeccC--------CC-ccccEEEecccee
Confidence            99999999999999999999999995554        22 5566666665443

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=98.55  E-value=1.6e-06  Score=61.13  Aligned_cols=80  Identities=20%  Similarity=0.112  Sum_probs=53.9

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCeeE----------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v~----------~~l~gH~~~   65 (120)
                      ++|++++.|+.  +||+.+.....      .+..|...+.+        +.+.++.|+.+.          ..+.+|...
T Consensus        64 ~~l~~~~~~~~i~i~~~~~~~~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  137 (289)
T cd00200          64 TYLASGSSDKTIRLWDLETGECVR------TLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDW  137 (289)
T ss_pred             CEEEEEcCCCeEEEEEcCcccceE------EEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCc
Confidence            48999999999  99997643221      22233322222        222233344443          556689999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |.+++|+|++.++++++.|+.|++|+
T Consensus       138 i~~~~~~~~~~~l~~~~~~~~i~i~d  163 (289)
T cd00200         138 VNSVAFSPDGTFVASSSQDGTIKLWD  163 (289)
T ss_pred             EEEEEEcCcCCEEEEEcCCCcEEEEE
Confidence            99999999999999998899999543

>KOG0973|consensus

Probab=98.54  E-value=2.7e-07  Score=78.53  Aligned_cols=87  Identities=21%  Similarity=0.092  Sum_probs=64.5

Q ss_pred             CCEEEEEcCCCc--eEecCC------Cce----eecc--CCcceEeeccCCCceE--------EEeccCCCeeE------
Q psy75             5 FRLVLSSTPDHH--HKQNAQ------LRK----KNVA--PGMGGLEEHLRNPSST--------DLFGQADAVVK------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~------~~~----~~~~--~~~~~l~~h~~~v~~~--------~~~~~~D~~v~------   56 (120)
                      +++|||||.|+.  +|+...      ...    ....  .....+.+|...|.++        ..+.+.|.+|.      
T Consensus        81 G~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~t  160 (942)
T KOG0973|consen   81 GSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKT  160 (942)
T ss_pred             CCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEcccc
Confidence            689999999998  998762      000    0000  0113577888877653        34456676664      


Q ss_pred             ----EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 ----HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ----~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                          .++.+|..-|-.|.|.|-|++|||-++|++||+|+
T Consensus       161 F~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwr  199 (942)
T KOG0973|consen  161 FELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWR  199 (942)
T ss_pred             ceeeeeeecccccccceEECCccCeeeeecCCceEEEEE
Confidence                67889999999999999999999999999999766

>KOG0269|consensus

Probab=98.54  E-value=1.5e-07  Score=78.17  Aligned_cols=102  Identities=18%  Similarity=0.162  Sum_probs=76.2

Q ss_pred             CCCCCEEEEEcCCCc--eEecCC-CceeeccCCcceEeeccCCCceE---------EEeccCCCeeE----------Eec
Q psy75             2 RAIFRLVLSSTPDHH--HKQNAQ-LRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK----------HVL   59 (120)
Q Consensus         2 ~~~~~~L~S~s~D~t--lWdi~~-~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~----------~~l   59 (120)
                      ++|-|+||+|+..+.  +||+.. .+.+.    ...|..|...++++         .++|+.|++++          .++
T Consensus        97 ~~~~NlIAT~s~nG~i~vWdlnk~~rnk~----l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~  172 (839)
T KOG0269|consen   97 QLYSNLIATCSTNGVISVWDLNKSIRNKL----LTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTF  172 (839)
T ss_pred             cchhhhheeecCCCcEEEEecCccccchh----hhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccc
Confidence            468899999999998  999975 22221    13567787777664         56788999997          566


Q ss_pred             cccccCeEEEEEcCCC-CEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            60 EGHDRGVNWACFHPTL-PLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~-~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      .+....|..|+|+|-. ..++|+.+.|.+.        +||+|--..|...|--|.|
T Consensus       173 ~~nSESiRDV~fsp~~~~~F~s~~dsG~lq--------lWDlRqp~r~~~k~~AH~G  221 (839)
T KOG0269|consen  173 RSNSESIRDVKFSPGYGNKFASIHDSGYLQ--------LWDLRQPDRCEKKLTAHNG  221 (839)
T ss_pred             cccchhhhceeeccCCCceEEEecCCceEE--------EeeccCchhHHHHhhcccC
Confidence            7888899999999964 5799999999999        7777765565555555544

>KOG0268|consensus

Probab=98.53  E-value=1.1e-07  Score=73.57  Aligned_cols=83  Identities=19%  Similarity=0.109  Sum_probs=53.8

Q ss_pred             CEEEEEcCCCc--eEecCCCceeecc-CC--cceEeeccCCCceEEEe-ccCCCeeE-----------EeccccccCeEE
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVA-PG--MGGLEEHLRNPSSTDLF-GQADAVVK-----------HVLEGHDRGVNW   68 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~-~~--~~~l~~h~~~v~~~~~~-~~~D~~v~-----------~~l~gH~~~V~~   68 (120)
                      ++|+||+.|++  |+|+......... ..  ++++.   -++....|. ++.|..+-           .+..+|.++|.+
T Consensus       201 sILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~Is---wnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~d  277 (433)
T KOG0268|consen  201 SILASCASDRSIVLYDLRQASPLKKVILTMRTNTIC---WNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMD  277 (433)
T ss_pred             hheeeeccCCceEEEecccCCccceeeeecccccee---cCccccceeeccccccceehhhhhhcccchhhcccceeEEE
Confidence            57899988988  9999653221110 00  00111   011222232 33344332           677899999999


Q ss_pred             EEEcCCCCEEEEEeCCCCEEecC
Q psy75            69 ACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        69 v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |+|||.|+-|||||.|++|+|++
T Consensus       278 VdfsptG~EfvsgsyDksIRIf~  300 (433)
T KOG0268|consen  278 VDFSPTGQEFVSGSYDKSIRIFP  300 (433)
T ss_pred             eccCCCcchhccccccceEEEee
Confidence            99999999999999999999954

>KOG0301|consensus

Probab=98.53  E-value=2.6e-07  Score=76.04  Aligned_cols=59  Identities=19%  Similarity=0.054  Sum_probs=42.9

Q ss_pred             eEeeccCCCceEE-------EeccCCCeeE---------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            34 GLEEHLRNPSSTD-------LFGQADAVVK---------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        34 ~l~~h~~~v~~~~-------~~~~~D~~v~---------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +|.+|...|..+.       ++++.|+.++         ..+.||++-|.+++..+++..|+|+++|++++||+.
T Consensus       174 tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~  248 (745)
T KOG0301|consen  174 TFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKK  248 (745)
T ss_pred             hhccchhheeeeEEecCCCeEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeec
Confidence            4556655444321       3445666665         556689999999997777788999999999999876

>KOG0296|consensus

Probab=98.52  E-value=3.9e-07  Score=70.50  Aligned_cols=77  Identities=14%  Similarity=0.106  Sum_probs=56.0

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce-----------------EEEeccCCCeeEEeccccccCe
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS-----------------TDLFGQADAVVKHVLEGHDRGV   66 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~-----------------~~~~~~~D~~v~~~l~gH~~~V   66 (120)
                      .+.|.|+.|++  |||+...+.++.-+       |...|..                 +..|....|.++.++.||...|
T Consensus       299 pL~A~G~vdG~i~iyD~a~~~~R~~c~-------he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~I  371 (399)
T KOG0296|consen  299 PLAACGSVDGTIAIYDLAASTLRHICE-------HEDGVTKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYTGHQMGI  371 (399)
T ss_pred             chhhcccccceEEEEecccchhheecc-------CCCceEEEEEcCcchheeeccCceEEeeeccccceEEEEecCchhe
Confidence            36789999999  99997644333222       2222222                 2233334455568999999999


Q ss_pred             EEEEEcCCCCEEEEEeCCCCEEe
Q psy75            67 NWACFHPTLPLIVSGKGLCLLDH   89 (120)
Q Consensus        67 ~~v~fsp~~~~laSgs~D~~iki   89 (120)
                      .+.+++|+.++++|+|.|++.++
T Consensus       372 l~f~ls~~~~~vvT~s~D~~a~V  394 (399)
T KOG0296|consen  372 LDFALSPQKRLVVTVSDDNTALV  394 (399)
T ss_pred             eEEEEcCCCcEEEEecCCCeEEE
Confidence            99999999999999999999993

>KOG0283|consensus

Probab=98.51  E-value=5.7e-07  Score=74.80  Aligned_cols=80  Identities=15%  Similarity=0.087  Sum_probs=59.5

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE-Eeccc--------cccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK-HVLEG--------HDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~-~~l~g--------H~~~   65 (120)
                      ++|+|+|+|+|  ||++....+..      +| .|..-|+|+.|         +|+-|+.++ ..+..        =..-
T Consensus       381 ~fLLSSSMDKTVRLWh~~~~~CL~------~F-~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~l  453 (712)
T KOG0283|consen  381 NFLLSSSMDKTVRLWHPGRKECLK------VF-SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDL  453 (712)
T ss_pred             CeeEeccccccEEeecCCCcceee------EE-ecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhh
Confidence            68999999999  99997543332      23 47777888765         355677776 12211        1367


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      |++|+|.|||+..+-|+.+|.|++|..
T Consensus       454 ITAvcy~PdGk~avIGt~~G~C~fY~t  480 (712)
T KOG0283|consen  454 ITAVCYSPDGKGAVIGTFNGYCRFYDT  480 (712)
T ss_pred             heeEEeccCCceEEEEEeccEEEEEEc
Confidence            999999999999999999999997655

>KOG0290|consensus

Probab=98.51  E-value=5.6e-07  Score=68.23  Aligned_cols=89  Identities=18%  Similarity=0.047  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEe---------ccCCCeeE-----------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF---------GQADAVVK-----------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~---------~~~D~~v~-----------------   56 (120)
                      +++|.++|-|.|  +||+..+...+.   ...+..|..+|.++.|.         .+.||+++                 
T Consensus       163 p~~igtSSiDTTCTiWdie~~~~~~v---kTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p  239 (364)
T KOG0290|consen  163 PNLIGTSSIDTTCTIWDIETGVSGTV---KTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDP  239 (364)
T ss_pred             cceeEeecccCeEEEEEEeeccccce---eeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCC
Confidence            688999999999  999976422000   02467788777664331         12344433                 


Q ss_pred             -----------------------------------------EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCC
Q psy75            57 -----------------------------------------HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLF   94 (120)
Q Consensus        57 -----------------------------------------~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~   94 (120)
                                                               -.|.+|.+.||.|+|.|... .|+||++|.-+-||+=++
T Consensus       240 ~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q  319 (364)
T KOG0290|consen  240 SPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ  319 (364)
T ss_pred             CCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence                                                     46779999999999999875 699999999888666544


Q ss_pred             ce
Q psy75            95 PV   96 (120)
Q Consensus        95 ~~   96 (120)
                      +.
T Consensus       320 ~~  321 (364)
T KOG0290|consen  320 MP  321 (364)
T ss_pred             cc
Confidence            33

>KOG0296|consensus

Probab=98.50  E-value=7.8e-07  Score=68.85  Aligned_cols=41  Identities=20%  Similarity=0.152  Sum_probs=35.8

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC--CCceE
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN--LFPVV   97 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~--~~~~~   97 (120)
                      +.+.||+..+++=.|.|+|+.+++|..|++|++|+-  .+|+.
T Consensus       184 kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~  226 (399)
T KOG0296|consen  184 KVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLH  226 (399)
T ss_pred             eEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeE
Confidence            788899999999999999999999999999997754  45543

>KOG1445|consensus

Probab=98.50  E-value=5.1e-07  Score=74.41  Aligned_cols=85  Identities=16%  Similarity=0.084  Sum_probs=63.7

Q ss_pred             CEEEEEcCCCc--eEecCC--CceeeccCCcceEeeccCCCceEEEe---------ccCCCeeE----------Eecccc
Q psy75             6 RLVLSSTPDHH--HKQNAQ--LRKKNVAPGMGGLEEHLRNPSSTDLF---------GQADAVVK----------HVLEGH   62 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~--~~~~~~~~~~~~l~~h~~~v~~~~~~---------~~~D~~v~----------~~l~gH   62 (120)
                      ..||.|+.|+.  ||.+..  +......|. ..+..|...+..+.++         +++|.+++          -.|.||
T Consensus       641 ~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe-~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gH  719 (1012)
T KOG1445|consen  641 ERLAVATDDGQINLWRLTANGLPENEMTPE-KILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGH  719 (1012)
T ss_pred             HHeeecccCceEEEEEeccCCCCcccCCcc-eeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccC
Confidence            46889999998  999864  222222222 2466777666665553         45677765          577899


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +..|..++|||+|+++||.+.|++|++|.
T Consensus       720 tdqIf~~AWSpdGr~~AtVcKDg~~rVy~  748 (1012)
T KOG1445|consen  720 TDQIFGIAWSPDGRRIATVCKDGTLRVYE  748 (1012)
T ss_pred             cCceeEEEECCCCcceeeeecCceEEEeC
Confidence            99999999999999999999999999754

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=98.49  E-value=1.8e-06  Score=60.82  Aligned_cols=79  Identities=20%  Similarity=0.155  Sum_probs=54.0

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCee----------EEeccccccCe
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVV----------KHVLEGHDRGV   66 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v----------~~~l~gH~~~V   66 (120)
                      .+++++.|+.  +||+........      +..|...+.+        +.+.++.|+.+          ...+.+|...|
T Consensus       191 ~l~~~~~~~~i~i~d~~~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i  264 (289)
T cd00200         191 KLLSSSSDGTIKLWDLSTGKCLGT------LRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSV  264 (289)
T ss_pred             EEEEecCCCcEEEEECCCCceecc------hhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcE
Confidence            7888888888  999975433322      1122222222        22222224443          36677899999


Q ss_pred             EEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            67 NWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        67 ~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .+++|+|+++.|++++.|+.+++|+
T Consensus       265 ~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         265 TSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             EEEEECCCCCEEEEecCCCeEEecC
Confidence            9999999999999999999999875

>KOG2445|consensus

Probab=98.47  E-value=1.1e-06  Score=67.01  Aligned_cols=92  Identities=12%  Similarity=-0.051  Sum_probs=63.4

Q ss_pred             CCCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE----------EEeccCCCeeE-------------
Q psy75             2 RAIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST----------DLFGQADAVVK-------------   56 (120)
Q Consensus         2 ~~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~----------~~~~~~D~~v~-------------   56 (120)
                      -|||+.+|+||.|.+  |||.+.....  -.+......|.+.+..+          ....+.|++++             
T Consensus        22 D~~GRRmAtCSsDq~vkI~d~~~~s~~--W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~   99 (361)
T KOG2445|consen   22 DFYGRRMATCSSDQTVKIWDSTSDSGT--WSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHG   99 (361)
T ss_pred             cccCceeeeccCCCcEEEEeccCCCCc--eEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccccccccc
Confidence            479999999999999  9997432211  11123566777665442          23445666654             


Q ss_pred             ------EeccccccCeEEEEEcCC--CCEEEEEeCCCCEEecCCCCc
Q psy75            57 ------HVLEGHDRGVNWACFHPT--LPLIVSGKGLCLLDHGPNLFP   95 (120)
Q Consensus        57 ------~~l~gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~~~~~   95 (120)
                            .++......|..|.|.|.  |-.+|+++.||++|||.-+-|
T Consensus       100 ~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp  146 (361)
T KOG2445|consen  100 RRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDP  146 (361)
T ss_pred             ceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCc
Confidence                  455567788999999997  347999999999996554333

>KOG0293|consensus

Probab=98.46  E-value=7.1e-07  Score=70.27  Aligned_cols=84  Identities=15%  Similarity=-0.007  Sum_probs=58.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec--------cCCCee----------EEecc-ccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG--------QADAVV----------KHVLE-GHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~--------~~D~~v----------~~~l~-gH~   63 (120)
                      |++|||||.|.|  +|++........   ..++.+|...|.-+.+++        +.|..+          +..+. +|.
T Consensus       236 GkyLAsaSkD~Taiiw~v~~d~~~kl---~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~  312 (519)
T KOG0293|consen  236 GKYLASASKDSTAIIWIVVYDVHFKL---KKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLG  312 (519)
T ss_pred             CeeEeeccCCceEEEEEEecCcceee---eeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcC
Confidence            689999999999  999865333111   136788888776543332        222222          22332 466


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..+.+++|.|||..+++||.|++|..|+
T Consensus       313 ~S~~sc~W~pDg~~~V~Gs~dr~i~~wd  340 (519)
T KOG0293|consen  313 FSVSSCAWCPDGFRFVTGSPDRTIIMWD  340 (519)
T ss_pred             CCcceeEEccCCceeEecCCCCcEEEec
Confidence            8899999999999999999999999865

>KOG0310|consensus

Probab=98.46  E-value=1.1e-06  Score=69.78  Aligned_cols=33  Identities=12%  Similarity=0.017  Sum_probs=29.6

Q ss_pred             ccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            59 LEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +..|...|+|+.+..+++.|+|||-|+.+|+++
T Consensus       234 ~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd  266 (487)
T KOG0310|consen  234 MFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFD  266 (487)
T ss_pred             hhcccceEEEEEeecCCceEeecccccceEEEE
Confidence            345999999999999999999999999999766

>KOG1539|consensus

Probab=98.46  E-value=4.4e-07  Score=76.05  Aligned_cols=94  Identities=15%  Similarity=0.033  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeecc--CCc-ceEeeccC-CC-------ceEEEeccCCCeeEEeccccccCeEEEE
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVA--PGM-GGLEEHLR-NP-------SSTDLFGQADAVVKHVLEGHDRGVNWAC   70 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~--~~~-~~l~~h~~-~v-------~~~~~~~~~D~~v~~~l~gH~~~V~~v~   70 (120)
                      ..+.++||+.||.  .||..+...+...  .+. .....|.. .+       ..+.+.......+.+.|.||.+.|++.+
T Consensus       504 ~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~  583 (910)
T KOG1539|consen  504 TNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMT  583 (910)
T ss_pred             CCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeE
Confidence            3468999999999  9998653211100  000 01111111 00       0011111111223478889999999999


Q ss_pred             EcCCCCEEEEEeCCCCEEecCCCCceE
Q psy75            71 FHPTLPLIVSGKGLCLLDHGPNLFPVV   97 (120)
Q Consensus        71 fsp~~~~laSgs~D~~iki~~~~~~~~   97 (120)
                      |||||++|+|++.|++||+|+=+--.+
T Consensus       584 FS~DgrWlisasmD~tIr~wDlpt~~l  610 (910)
T KOG1539|consen  584 FSPDGRWLISASMDSTIRTWDLPTGTL  610 (910)
T ss_pred             eCCCCcEEEEeecCCcEEEEeccCcce
Confidence            999999999999999999655443333

>KOG0306|consensus

Probab=98.45  E-value=8e-07  Score=73.98  Aligned_cols=100  Identities=24%  Similarity=0.144  Sum_probs=77.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++||.+=.|+|  ++-+++.+-.      .++.+|.-.|.|++        +.++.|+.|+          +++-+|..
T Consensus       520 gk~LaVsLLdnTVkVyflDtlKFf------lsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdD  593 (888)
T KOG0306|consen  520 GKLLAVSLLDNTVKVYFLDTLKFF------LSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDD  593 (888)
T ss_pred             CcEEEEEeccCeEEEEEecceeee------eeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccC
Confidence            467777777888  7766653321      25778888877754        4567788887          78889999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhhc
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRARK  119 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (120)
                      .|.+|.|-|....+.|||-|+.+|        -||.-. +..+.+|.+|-.|++.
T Consensus       594 Svm~V~F~P~~~~FFt~gKD~kvK--------qWDg~k-Fe~iq~L~~H~~ev~c  639 (888)
T KOG0306|consen  594 SVMSVQFLPKTHLFFTCGKDGKVK--------QWDGEK-FEEIQKLDGHHSEVWC  639 (888)
T ss_pred             ceeEEEEcccceeEEEecCcceEE--------eechhh-hhhheeeccchheeee
Confidence            999999999999999999999999        667455 6668899998877753

>KOG0282|consensus

Probab=98.44  E-value=6.3e-07  Score=71.28  Aligned_cols=83  Identities=18%  Similarity=0.073  Sum_probs=60.7

Q ss_pred             CEEEEEcCCCc--eEecCC-CceeeccCCcceEeeccCCCceE--------EEeccCCCeeE--------Eecccccc-C
Q psy75             6 RLVLSSTPDHH--HKQNAQ-LRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK--------HVLEGHDR-G   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~-~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~--------~~l~gH~~-~   65 (120)
                      -+|+|||.|+.  ||++-. +++.      .++.+|...|.++        -++++.|..++        .....|.+ .
T Consensus       228 hLlLS~gmD~~vklW~vy~~~~~l------rtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~  301 (503)
T KOG0282|consen  228 HLLLSGGMDGLVKLWNVYDDRRCL------RTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKV  301 (503)
T ss_pred             eEEEecCCCceEEEEEEecCccee------hhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCC
Confidence            58999999999  999865 3333      4678888776542        23556677665        12223444 5


Q ss_pred             eEEEEEcCCC-CEEEEEeCCCCEEecCCCCceEeeCCC
Q psy75            66 VNWACFHPTL-PLIVSGKGLCLLDHGPNLFPVVLDSSD  102 (120)
Q Consensus        66 V~~v~fsp~~-~~laSgs~D~~iki~~~~~~~~~~~~~  102 (120)
                      +++|.|||++ +.+++|+.|+.|+        .||+|.
T Consensus       302 ~~cvkf~pd~~n~fl~G~sd~ki~--------~wDiRs  331 (503)
T KOG0282|consen  302 PTCVKFHPDNQNIFLVGGSDKKIR--------QWDIRS  331 (503)
T ss_pred             ceeeecCCCCCcEEEEecCCCcEE--------EEeccc
Confidence            7899999999 6899999999999        778775

>KOG1445|consensus

Probab=98.44  E-value=3.3e-07  Score=75.48  Aligned_cols=100  Identities=17%  Similarity=0.133  Sum_probs=71.9

Q ss_pred             CEEEEEcCCCc--eEecCCCceeec-cCCcceEeeccC-CCceEEEeccCCCeeE------------------Eeccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNV-APGMGGLEEHLR-NPSSTDLFGQADAVVK------------------HVLEGHD   63 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~-~~~~~~l~~h~~-~v~~~~~~~~~D~~v~------------------~~l~gH~   63 (120)
                      .+||+||.|..  ||.+..+-.... .|.  ...+|.. .+-++.++++.|+.+.                  ..+.+|.
T Consensus        93 ~LLAT~S~D~~VKiW~lp~g~~q~LSape--~~~g~~~~~vE~l~fHpTaDgil~s~a~g~v~i~D~stqk~~~el~~h~  170 (1012)
T KOG1445|consen   93 ELLATCSRDEPVKIWKLPRGHSQKLSAPE--IDVGGGNVIVECLRFHPTADGILASGAHGSVYITDISTQKTAVELSGHT  170 (1012)
T ss_pred             hhhhcccCCCeeEEEecCCCcccccCCcc--eeecCCceEEEEeecccCcCceEEeccCceEEEEEcccCceeecccCCc
Confidence            47899999999  999974322211 111  1223322 2334555555443321                  5667999


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      ..|-+..|+.||.++++.+.|+.|+        +||-|--..|++..|+|++
T Consensus       171 d~vQSa~WseDG~llatscKdkqir--------ifDPRa~~~piQ~te~H~~  214 (1012)
T KOG1445|consen  171 DKVQSADWSEDGKLLATSCKDKQIR--------IFDPRASMEPIQTTEGHGG  214 (1012)
T ss_pred             hhhhccccccCCceEeeecCCcceE--------EeCCccCCCcccccccccc
Confidence            9999999999999999999999999        8888888999999999954

>KOG0270|consensus

Probab=98.44  E-value=8.9e-07  Score=69.83  Aligned_cols=88  Identities=23%  Similarity=0.205  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCc-----------------ceEeeccCCC---------ceEEEeccCCCeeE
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGM-----------------GGLEEHLRNP---------SSTDLFGQADAVVK   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~-----------------~~l~~h~~~v---------~~~~~~~~~D~~v~   56 (120)
                      |||+|.|..|..  |||+.-..  ...|+.                 ..-.+|...|         ..+.++++.|.+|+
T Consensus       192 gNyvAiGtmdp~IeIWDLDI~d--~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~  269 (463)
T KOG0270|consen  192 GNYVAIGTMDPEIEIWDLDIVD--AVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVK  269 (463)
T ss_pred             cceEEEeccCceeEEecccccc--ccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEE
Confidence            789999999999  99985210  011110                 0112344222         13567888888876


Q ss_pred             ----------EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCC
Q psy75            57 ----------HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSD  102 (120)
Q Consensus        57 ----------~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~  102 (120)
                                .++.-|...|.+++|||..+ .|+|||.|++++        ++|.|+
T Consensus       270 lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~--------l~D~R~  318 (463)
T KOG0270|consen  270 LWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVA--------LKDCRD  318 (463)
T ss_pred             EEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEE--------eeeccC
Confidence                      67778999999999999875 699999999999        667663

>KOG0308|consensus

Probab=98.42  E-value=2.4e-07  Score=75.95  Aligned_cols=87  Identities=16%  Similarity=0.080  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE------------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK------------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~------------~~l~gH   62 (120)
                      +++|.|||.|++  +|++.........|...+++.|..++|++        .++++.|-+|+            .++..|
T Consensus        37 ~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H  116 (735)
T KOG0308|consen   37 GRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTH  116 (735)
T ss_pred             CceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcc
Confidence            578999999999  99987543332334345677888888763        35666677766            566789


Q ss_pred             ccCeEEEEE-cCCCCEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACF-HPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~f-sp~~~~laSgs~D~~iki~~   91 (120)
                      ..-|.|+++ -++..++|||+-|+.|++|+
T Consensus       117 ~DYVkcla~~ak~~~lvaSgGLD~~IflWD  146 (735)
T KOG0308|consen  117 KDYVKCLAYIAKNNELVASGGLDRKIFLWD  146 (735)
T ss_pred             cchheeeeecccCceeEEecCCCccEEEEE
Confidence            999999999 88889999999999999543

>KOG0316|consensus

Probab=98.42  E-value=9.5e-07  Score=65.46  Aligned_cols=32  Identities=13%  Similarity=0.029  Sum_probs=21.2

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS   44 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~   44 (120)
                      .++||+.|+.  +||+++++...      .|.+|.+.||.
T Consensus        73 kf~s~GgDk~v~vwDV~TGkv~R------r~rgH~aqVNt  106 (307)
T KOG0316|consen   73 KFASCGGDKAVQVWDVNTGKVDR------RFRGHLAQVNT  106 (307)
T ss_pred             ccccCCCCceEEEEEcccCeeee------ecccccceeeE
Confidence            4677777877  88887765542      46666666654

>KOG1036|consensus

Probab=98.42  E-value=1.5e-06  Score=65.97  Aligned_cols=50  Identities=22%  Similarity=0.245  Sum_probs=36.4

Q ss_pred             Eecccccc---------CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            57 HVLEGHDR---------GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        57 ~~l~gH~~---------~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      +.|..|..         +||+++|||--..||||+.||.|.        +||.-+..+ |.+|.+++.
T Consensus       217 yaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~--------~Wd~~~rKr-l~q~~~~~~  275 (323)
T KOG1036|consen  217 YAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVN--------IWDLFNRKR-LKQLAKYET  275 (323)
T ss_pred             eeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEE--------EccCcchhh-hhhccCCCC
Confidence            56666643         589999999988999999999999        555444222 666666644

>KOG1273|consensus

Probab=98.39  E-value=7.3e-07  Score=68.29  Aligned_cols=36  Identities=11%  Similarity=0.104  Sum_probs=32.7

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +.+.+|..+|.+++|||||+.|+|+|.|..|++|+=
T Consensus        59 r~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl   94 (405)
T KOG1273|consen   59 RMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDL   94 (405)
T ss_pred             hhhhccccceeEEEecCCCCEeeeecCCceeEEEec
Confidence            467799999999999999999999999999997654

>KOG0318|consensus

Probab=98.39  E-value=1.2e-06  Score=70.50  Aligned_cols=87  Identities=15%  Similarity=0.128  Sum_probs=60.0

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeecc-C--CCce----------EEEeccCCCeeEEeccccccCeEEEE
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHL-R--NPSS----------TDLFGQADAVVKHVLEGHDRGVNWAC   70 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~-~--~v~~----------~~~~~~~D~~v~~~l~gH~~~V~~v~   70 (120)
                      ..++|+|.|++  |||+.........+...++.... .  +.++          +.+..-.|+.+.+++.||...|++++
T Consensus       248 ~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLt  327 (603)
T KOG0318|consen  248 TQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALT  327 (603)
T ss_pred             ceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEE
Confidence            57899999999  99998654443333221111100 0  0011          22233356667799999999999999


Q ss_pred             EcCCCCEEEEEeCCCCEEecCC
Q psy75            71 FHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        71 fsp~~~~laSgs~D~~iki~~~   92 (120)
                      -+|+++.|.|||.||.|.-|..
T Consensus       328 v~~d~~~i~SgsyDG~I~~W~~  349 (603)
T KOG0318|consen  328 VSPDGKTIYSGSYDGHINSWDS  349 (603)
T ss_pred             EcCCCCEEEeeccCceEEEEec
Confidence            9999999999999999996654

>KOG1009|consensus

Probab=98.36  E-value=7e-07  Score=69.84  Aligned_cols=87  Identities=16%  Similarity=0.132  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceee---ccCCcceEeeccCCCceEEEec--------cCCCe-----------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKN---VAPGMGGLEEHLRNPSSTDLFG--------QADAV-----------------   54 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~---~~~~~~~l~~h~~~v~~~~~~~--------~~D~~-----------------   54 (120)
                      .+.|+||+.|+.  +|.+.......   ......+|..|...||.+.+.+        +.+++                 
T Consensus        26 ~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e  105 (434)
T KOG1009|consen   26 LNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTE  105 (434)
T ss_pred             ccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccch
Confidence            358999999998  99875321111   1112246788888888765532        22222                 


Q ss_pred             ---------eEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            55 ---------VKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        55 ---------v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                               +++++.+|...|..++|+|++..+++||.|+++++|+
T Consensus       106 ~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~D  151 (434)
T KOG1009|consen  106 ADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWD  151 (434)
T ss_pred             hhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEE
Confidence                     2367789999999999999999999999999999643

>KOG0291|consensus

Probab=98.35  E-value=4e-06  Score=69.99  Aligned_cols=41  Identities=15%  Similarity=0.137  Sum_probs=36.4

Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEe
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVL   98 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~   98 (120)
                      ...||...++++++||||++||+|++|++||+|+.+.-|++
T Consensus       345 KQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~  385 (893)
T KOG0291|consen  345 KQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCF  385 (893)
T ss_pred             eccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEE
Confidence            44699999999999999999999999999999988765554

>KOG0322|consensus

Probab=98.35  E-value=2.2e-06  Score=64.26  Aligned_cols=100  Identities=18%  Similarity=0.134  Sum_probs=64.6

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCc----ceEeeccCCCceEEEecc--------CC-Cee-------------EEe
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGM----GGLEEHLRNPSSTDLFGQ--------AD-AVV-------------KHV   58 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~----~~l~~h~~~v~~~~~~~~--------~D-~~v-------------~~~   58 (120)
                      +|+.|=.++.  +||+..+.+.-..|..    .....|...+.++++-..        .+ +-+             +..
T Consensus       167 lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e  246 (323)
T KOG0322|consen  167 LLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKE  246 (323)
T ss_pred             EEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccce
Confidence            3445555666  9999875444333332    233456666666554321        11 111             123


Q ss_pred             ccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            59 LEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      ++-...+|+.|..-||++++||++||+.||        +|.-+. ..|||+|+-|.+
T Consensus       247 ~~lknpGv~gvrIRpD~KIlATAGWD~RiR--------Vyswrt-l~pLAVLkyHsa  294 (323)
T KOG0322|consen  247 ITLKNPGVSGVRIRPDGKILATAGWDHRIR--------VYSWRT-LNPLAVLKYHSA  294 (323)
T ss_pred             EEecCCCccceEEccCCcEEeecccCCcEE--------EEEecc-CCchhhhhhhhc
Confidence            333567899999999999999999999999        666555 778888887764

>PTZ00420 coronin; Provisional

Probab=98.34  E-value=5.7e-06  Score=68.11  Aligned_cols=89  Identities=13%  Similarity=-0.016  Sum_probs=54.6

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCeeE----------EeccccccCe
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVVK----------HVLEGHDRGV   66 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v~----------~~l~gH~~~V   66 (120)
                      +|+|||.|++  +||+.++.....      +. |...+.+        +.+.++.|+.++          .++.+|.+.+
T Consensus       140 iLaSgS~DgtIrIWDl~tg~~~~~------i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~  212 (568)
T PTZ00420        140 IMCSSGFDSFVNIWDIENEKRAFQ------IN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGK  212 (568)
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEE------Ee-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCc
Confidence            5689999999  999986543321      11 1122222        222333455443          6778898765


Q ss_pred             E-----EEEEcCCCCEEEEEeCCC----CEEecCCCCceEeeCCCCccchhhh
Q psy75            67 N-----WACFHPTLPLIVSGKGLC----LLDHGPNLFPVVLDSSDFFVPIAKL  110 (120)
Q Consensus        67 ~-----~v~fsp~~~~laSgs~D~----~iki~~~~~~~~~~~~~~~~~~~~~  110 (120)
                      .     ...|+|++..|+|++.|+    +|+        +||.++...|+..+
T Consensus       213 ~s~~v~~~~fs~d~~~IlTtG~d~~~~R~Vk--------LWDlr~~~~pl~~~  257 (568)
T PTZ00420        213 NTKNIWIDGLGGDDNYILSTGFSKNNMREMK--------LWDLKNTTSALVTM  257 (568)
T ss_pred             eeEEEEeeeEcCCCCEEEEEEcCCCCccEEE--------EEECCCCCCceEEE
Confidence            4     345678999988888764    799        66666555555543

>KOG0647|consensus

Probab=98.34  E-value=3.2e-06  Score=64.28  Aligned_cols=28  Identities=21%  Similarity=0.223  Sum_probs=25.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +||+|+|||.-..|+|++.||++.+|+.
T Consensus       253 aVNsi~FhP~hgtlvTaGsDGtf~FWDk  280 (347)
T KOG0647|consen  253 AVNSIAFHPVHGTLVTAGSDGTFSFWDK  280 (347)
T ss_pred             EecceEeecccceEEEecCCceEEEecc
Confidence            5899999998889999999999998887

>KOG0641|consensus

Probab=98.29  E-value=7.1e-06  Score=60.74  Aligned_cols=83  Identities=11%  Similarity=0.028  Sum_probs=53.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeecc---CCCce--------EEEeccCCCee----------EEeccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHL---RNPSS--------TDLFGQADAVV----------KHVLEG   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~---~~v~~--------~~~~~~~D~~v----------~~~l~g   61 (120)
                      +-+++|||.|+|  +||+.-..+......  .+.+-.   ..|..        +..++..|.++          .+.+-.
T Consensus       194 ~~m~~sgsqdktirfwdlrv~~~v~~l~~--~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~p  271 (350)
T KOG0641|consen  194 GAMFASGSQDKTIRFWDLRVNSCVNTLDN--DFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHP  271 (350)
T ss_pred             CcEEEccCCCceEEEEeeeccceeeeccC--cccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCC
Confidence            347899999999  999853222221110  111000   11111        22334445443          277778


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEe
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDH   89 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki   89 (120)
                      |++.|.+|.|||.-.++++||.|.+||+
T Consensus       272 hsadir~vrfsp~a~yllt~syd~~ikl  299 (350)
T KOG0641|consen  272 HSADIRCVRFSPGAHYLLTCSYDMKIKL  299 (350)
T ss_pred             CccceeEEEeCCCceEEEEecccceEEE
Confidence            9999999999999889999999999996

>KOG4328|consensus

Probab=98.26  E-value=3.2e-06  Score=67.07  Aligned_cols=33  Identities=9%  Similarity=0.065  Sum_probs=28.5

Q ss_pred             cccccCeEEEEEcCCCC-EEEEEeCCCCEEecCC
Q psy75            60 EGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPN   92 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~   92 (120)
                      .-|...|++|++||..+ .|||||-|++.|||+-
T Consensus       319 ~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~  352 (498)
T KOG4328|consen  319 RLHKKKITSVALNPVCPWFLATASLDQTAKIWDL  352 (498)
T ss_pred             hhhhcccceeecCCCCchheeecccCcceeeeeh
Confidence            34888999999999987 5999999999996654

>KOG0643|consensus

Probab=98.25  E-value=3.9e-06  Score=63.07  Aligned_cols=41  Identities=10%  Similarity=-0.035  Sum_probs=35.5

Q ss_pred             CCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            52 DAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        52 D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ++...-++.||++.|+|++.+.+.+.++|||.|.++|+|+=
T Consensus        41 nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv   81 (327)
T KOG0643|consen   41 NGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDV   81 (327)
T ss_pred             CCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEc
Confidence            34445678899999999999999999999999999998764

>KOG0639|consensus

Probab=98.24  E-value=2.5e-06  Score=68.78  Aligned_cols=88  Identities=11%  Similarity=0.056  Sum_probs=57.9

Q ss_pred             CCEEEEEcCCCc--eEecCCC--ceeeccCCc----ceEeeccCCCceE----------EEeccCCCeeEEeccccccCe
Q psy75             5 FRLVLSSTPDHH--HKQNAQL--RKKNVAPGM----GGLEEHLRNPSST----------DLFGQADAVVKHVLEGHDRGV   66 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~--~~~~~~~~~----~~l~~h~~~v~~~----------~~~~~~D~~v~~~l~gH~~~V   66 (120)
                      ++.|+.|+.-.|  |||+...  +.+...++.    ..+.  ......+          .+|.-.+.++...|.||+.++
T Consensus       477 grtLivGGeastlsiWDLAapTprikaeltssapaCyALa--~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGa  554 (705)
T KOG0639|consen  477 GRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALA--ISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA  554 (705)
T ss_pred             CceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhh--cCCccceeeeeccCCcEEEEEcccceeeecccCCCCCc
Confidence            567888888667  9999752  222222110    0010  0000112          333334455558899999999


Q ss_pred             EEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCC
Q psy75            67 NWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSD  102 (120)
Q Consensus        67 ~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~  102 (120)
                      .||..++||..|=||+-|+++|        +||.|.
T Consensus       555 scIdis~dGtklWTGGlDntvR--------cWDlre  582 (705)
T KOG0639|consen  555 SCIDISKDGTKLWTGGLDNTVR--------CWDLRE  582 (705)
T ss_pred             eeEEecCCCceeecCCCcccee--------ehhhhh
Confidence            9999999999999999999999        777665

>KOG1007|consensus

Probab=98.23  E-value=5.4e-06  Score=62.98  Aligned_cols=78  Identities=15%  Similarity=0.090  Sum_probs=56.7

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE---------EeccCCCeeE-------------------
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVVK-------------------   56 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~-------------------   56 (120)
                      +||||+.|+-  +||..+.+.    |- ..+.+|++++.++.         ++++.|..|.                   
T Consensus       229 ~lvt~gDdgyvriWD~R~tk~----pv-~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~de  303 (370)
T KOG1007|consen  229 ILVTCGDDGYVRIWDTRKTKF----PV-QELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDE  303 (370)
T ss_pred             EEEEcCCCccEEEEeccCCCc----cc-cccCCCceEEEEEEecCccceEEEecCCCceeEEEecccccccccccccccc
Confidence            6899999998  999865322    11 25677888776643         3333332221                   


Q ss_pred             --------------------EeccccccCeEEEEEcCCCCE-EEEEeCCCCEEe
Q psy75            57 --------------------HVLEGHDRGVNWACFHPTLPL-IVSGKGLCLLDH   89 (120)
Q Consensus        57 --------------------~~l~gH~~~V~~v~fsp~~~~-laSgs~D~~iki   89 (120)
                                          .++..|...|.+++||.-.++ +||-|.||.+.|
T Consensus       304 se~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviI  357 (370)
T KOG1007|consen  304 SESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVII  357 (370)
T ss_pred             ccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEe
Confidence                                467789999999999998885 899999999986

>KOG0641|consensus

Probab=98.21  E-value=8.9e-06  Score=60.24  Aligned_cols=81  Identities=16%  Similarity=0.041  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec--------cCCCeeE--------------Eecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG--------QADAVVK--------------HVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~--------~~D~~v~--------------~~l~   60 (120)
                      +++|+||-.|..  ++|+.+++...      .+-.|+..+.|+.|++        +.|..++              .+..
T Consensus       243 grll~sg~~dssc~lydirg~r~iq------~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~  316 (350)
T KOG0641|consen  243 GRLLASGHADSSCMLYDIRGGRMIQ------RFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVA  316 (350)
T ss_pred             cceeeeccCCCceEEEEeeCCceee------eeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEE
Confidence            689999999998  99999877653      5667888888877654        4676665              3445


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|...+..+.|||..--++|.|.|+++.+|.
T Consensus       317 ehkdk~i~~rwh~~d~sfisssadkt~tlwa  347 (350)
T KOG0641|consen  317 EHKDKAIQCRWHPQDFSFISSSADKTATLWA  347 (350)
T ss_pred             eccCceEEEEecCccceeeeccCcceEEEec
Confidence            6899999999999987899999999999774

>smart00320 WD40 WD40 repeats

Probab=98.21  E-value=6.9e-06  Score=40.73  Aligned_cols=36  Identities=19%  Similarity=0.182  Sum_probs=31.9

Q ss_pred             EEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            56 KHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        56 ~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ...+.+|...|+++.|+|++..+++++.|+.+++|+
T Consensus         5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            456678999999999999999999999999999774

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG0299|consensus

Probab=98.19  E-value=3.1e-06  Score=67.10  Aligned_cols=81  Identities=20%  Similarity=0.061  Sum_probs=63.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      ++|||+|+.|..  ||+..+....+      ++.+|...|.++        .++++.|.+++          .++-||..
T Consensus       214 gkylatgg~d~~v~Iw~~~t~ehv~------~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd  287 (479)
T KOG0299|consen  214 GKYLATGGRDRHVQIWDCDTLEHVK------VFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQD  287 (479)
T ss_pred             CcEEEecCCCceEEEecCcccchhh------cccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCcc
Confidence            579999999999  99998755443      477787777653        45677888887          57779999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|..+.-..-++.+--|+.|+++++|+
T Consensus       288 ~v~~IdaL~reR~vtVGgrDrT~rlwK  314 (479)
T KOG0299|consen  288 GVLGIDALSRERCVTVGGRDRTVRLWK  314 (479)
T ss_pred             ceeeechhcccceEEeccccceeEEEe
Confidence            999999887766665566899999765

>KOG0644|consensus

Probab=98.18  E-value=9.8e-07  Score=74.34  Aligned_cols=78  Identities=18%  Similarity=0.129  Sum_probs=59.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +.++++||.|..  ||.+.+.++..      +..+|+..+..+        ...++.|..++          ..+.||++
T Consensus       202 g~~Iitgsdd~lvKiwS~et~~~lA------s~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtg  275 (1113)
T KOG0644|consen  202 GRYIITGSDDRLVKIWSMETARCLA------SCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTG  275 (1113)
T ss_pred             cceEeecCccceeeeeeccchhhhc------cCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhcccc
Confidence            678999999998  99987755432      456777765542        22345666554          67889999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +|++++|+|--    |.+.|+++++|+-
T Consensus       276 avtaiafsP~~----sss~dgt~~~wd~  299 (1113)
T KOG0644|consen  276 AVTAIAFSPRA----SSSDDGTCRIWDA  299 (1113)
T ss_pred             ceeeeccCccc----cCCCCCceEeccc
Confidence            99999999963    7889999998876

>KOG1063|consensus

Probab=98.17  E-value=3e-06  Score=70.05  Aligned_cols=82  Identities=15%  Similarity=0.040  Sum_probs=59.2

Q ss_pred             CCEEEEEcCCCc-------eEecCCCceeeccCCcceEeeccCCCceEEEe--------ccCCCeeE-------------
Q psy75             5 FRLVLSSTPDHH-------HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF--------GQADAVVK-------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t-------lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~--------~~~D~~v~-------------   56 (120)
                      +++|||+..-.+       +|+..+=...      +.+.+|+-.|..+.|+        .+.|.++.             
T Consensus       537 gnliASaCKS~~~ehAvI~lw~t~~W~~~------~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~  610 (764)
T KOG1063|consen  537 GNLIASACKSSLKEHAVIRLWNTANWLQV------QELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFR  610 (764)
T ss_pred             CCEEeehhhhCCccceEEEEEeccchhhh------heecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhh
Confidence            678888876543       8887652222      2466676666654443        34455543             


Q ss_pred             -EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 -HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 -~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                       ..++.|+..|++.+|+|++..+||+|.|+++++|..
T Consensus       611 fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~  647 (764)
T KOG1063|consen  611 FACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEE  647 (764)
T ss_pred             hccccccceEEEEcccCcccceeEEecCCceEEEEec
Confidence             346789999999999999999999999999998876

>KOG0267|consensus

Probab=98.17  E-value=1.9e-06  Score=71.50  Aligned_cols=82  Identities=21%  Similarity=0.144  Sum_probs=65.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEe--------ccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF--------GQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~--------~~~D~~v~----------~~l~gH~~   64 (120)
                      .+.+++|++|..  ||.+...-..      .+|.+|...|.++.+.        |+.+++++          ++|.||..
T Consensus        40 ~r~~~~Gg~~~k~~L~~i~kp~~i------~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~  113 (825)
T KOG0267|consen   40 SRSLVTGGEDEKVNLWAIGKPNAI------TSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLL  113 (825)
T ss_pred             ceeeccCCCceeeccccccCCchh------heeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhcccc
Confidence            467889999988  9987542221      3578898888876553        45677776          78899999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .+.+|+|||.+.+.|+||.|..+++|+-
T Consensus       114 ~~~sv~f~P~~~~~a~gStdtd~~iwD~  141 (825)
T KOG0267|consen  114 NITSVDFHPYGEFFASGSTDTDLKIWDI  141 (825)
T ss_pred             CcceeeeccceEEeccccccccceehhh
Confidence            9999999999999999999999998765

>KOG0639|consensus

Probab=98.15  E-value=6.9e-06  Score=66.27  Aligned_cols=83  Identities=19%  Similarity=0.109  Sum_probs=62.1

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEe--------ccCCCeeE-------------------
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF--------GQADAVVK-------------------   56 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~--------~~~D~~v~-------------------   56 (120)
                      +++.||..|+.  +||+.+.....      .|.+|..+..|++++        |+-|.+++                   
T Consensus       522 kvcFsccsdGnI~vwDLhnq~~Vr------qfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQI  595 (705)
T KOG0639|consen  522 KVCFSCCSDGNIAVWDLHNQTLVR------QFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQI  595 (705)
T ss_pred             ceeeeeccCCcEEEEEcccceeee------cccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhh
Confidence            45667777887  99998754433      466787777776543        23343333                   


Q ss_pred             -------------------------------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCC
Q psy75            57 -------------------------------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLF   94 (120)
Q Consensus        57 -------------------------------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~   94 (120)
                                                     +.+.-|.+.|.++.|.+.|++++|.+.|+.+..|..+|
T Consensus       596 fSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPy  664 (705)
T KOG0639|consen  596 FSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY  664 (705)
T ss_pred             eecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCcc
Confidence                                           45556899999999999999999999999999998855

>KOG0310|consensus

Probab=98.13  E-value=1.2e-05  Score=64.08  Aligned_cols=81  Identities=22%  Similarity=0.130  Sum_probs=53.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCCeeE----------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAVVK----------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v~----------~~l~gH~   63 (120)
                      |++||.|...|.  +.|+.+ +..-     ..+..|...+..         +..+++.|+.++          ..+.||+
T Consensus        80 G~LlaaGD~sG~V~vfD~k~-r~iL-----R~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~ht  153 (487)
T KOG0310|consen   80 GRLLAAGDESGHVKVFDMKS-RVIL-----RQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHT  153 (487)
T ss_pred             CeEEEccCCcCcEEEecccc-HHHH-----HHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCc
Confidence            567777766666  888654 1110     123445544433         233455555444          4778999


Q ss_pred             cCeEEEEEcCCCC-EEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHPTLP-LIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~~-~laSgs~D~~iki~~   91 (120)
                      .-|.|.+|+|... +++|||.|++||+|+
T Consensus       154 DYVR~g~~~~~~~hivvtGsYDg~vrl~D  182 (487)
T KOG0310|consen  154 DYVRCGDISPANDHIVVTGSYDGKVRLWD  182 (487)
T ss_pred             ceeEeeccccCCCeEEEecCCCceEEEEE
Confidence            9999999999765 899999999999443

>KOG1188|consensus

Probab=98.12  E-value=1.2e-05  Score=61.91  Aligned_cols=36  Identities=31%  Similarity=0.412  Sum_probs=30.6

Q ss_pred             EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~   92 (120)
                      .-...|...|++|.|||..+ +|+|||.||.+.+++.
T Consensus       159 ~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~  195 (376)
T KOG1188|consen  159 QLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDT  195 (376)
T ss_pred             hhhhhccCcceeEEecCCCCCeEEeecccceEEeeec
Confidence            34468999999999999874 8999999999996544

>KOG4328|consensus

Probab=98.10  E-value=5e-06  Score=66.00  Aligned_cols=61  Identities=21%  Similarity=0.110  Sum_probs=46.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEe
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGK   82 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs   82 (120)
                      +.+|||||.|.|  |||+.+...+.. |                        +. ....|...|+++.|||.+..|+|.+
T Consensus       335 p~~laT~s~D~T~kIWD~R~l~~K~s-p------------------------~l-st~~HrrsV~sAyFSPs~gtl~TT~  388 (498)
T KOG4328|consen  335 PWFLATASLDQTAKIWDLRQLRGKAS-P------------------------FL-STLPHRRSVNSAYFSPSGGTLLTTC  388 (498)
T ss_pred             chheeecccCcceeeeehhhhcCCCC-c------------------------ce-ecccccceeeeeEEcCCCCceEeec
Confidence            457999999999  999976433210 0                        00 1225899999999999998899999


Q ss_pred             CCCCEEecC
Q psy75            83 GLCLLDHGP   91 (120)
Q Consensus        83 ~D~~iki~~   91 (120)
                      .|+.|+||+
T Consensus       389 ~D~~IRv~d  397 (498)
T KOG4328|consen  389 QDNEIRVFD  397 (498)
T ss_pred             cCCceEEee
Confidence            999999544

>KOG2096|consensus

Probab=98.09  E-value=3.7e-06  Score=64.63  Aligned_cols=40  Identities=25%  Similarity=0.302  Sum_probs=36.1

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCc
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFF  104 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~  104 (120)
                      .+|.||...|++++|+.||+.|||++.|++|+        +||.+||.
T Consensus        80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir--------~w~~~DF~  119 (420)
T KOG2096|consen   80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIR--------LWDVRDFE  119 (420)
T ss_pred             hhhhccCCceeeeEEcCCCceeEEEeCCceEE--------EEecchhh
Confidence            57889999999999999999999999999999        77777743

>KOG0322|consensus

Probab=98.06  E-value=6.9e-06  Score=61.68  Aligned_cols=47  Identities=21%  Similarity=0.192  Sum_probs=40.4

Q ss_pred             EEEeccCCCeeE----------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            45 TDLFGQADAVVK----------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        45 ~~~~~~~D~~v~----------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +...+++|+.++          .+|.-|.++|++|+|||+.+++|++|.|.+|.+|+
T Consensus       265 IlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWk  321 (323)
T KOG0322|consen  265 ILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWK  321 (323)
T ss_pred             EEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeee
Confidence            445678898887          45567999999999999999999999999999775

>KOG0289|consensus

Probab=98.05  E-value=1.2e-05  Score=63.59  Aligned_cols=98  Identities=16%  Similarity=0.124  Sum_probs=61.7

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCeeE-------Eeccc-----cc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVVK-------HVLEG-----HD   63 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v~-------~~l~g-----H~   63 (120)
                      ..++++|.|..  +|........      .....|...|+.        ..++++.|++.-       ..+.-     ..
T Consensus       274 ~~v~~aSad~~i~vws~~~~s~~------~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~  347 (506)
T KOG0289|consen  274 DTVITASADEIIRVWSVPLSSEP------TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSD  347 (506)
T ss_pred             hheeecCCcceEEeeccccccCc------cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeecccc
Confidence            45778999988  9987532211      123344444433        344556666543       22222     22


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhh
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
                      -.+++.+|||||-+|++|..|+-+|        +||...-. -++.|-+|.+.++
T Consensus       348 v~~ts~~fHpDgLifgtgt~d~~vk--------iwdlks~~-~~a~Fpght~~vk  393 (506)
T KOG0289|consen  348 VEYTSAAFHPDGLIFGTGTPDGVVK--------IWDLKSQT-NVAKFPGHTGPVK  393 (506)
T ss_pred             ceeEEeeEcCCceEEeccCCCceEE--------EEEcCCcc-ccccCCCCCCcee
Confidence            3589999999999999999999999        55645422 4667777666553

>KOG4378|consensus

Probab=98.04  E-value=1.6e-05  Score=64.17  Aligned_cols=94  Identities=12%  Similarity=0.009  Sum_probs=66.5

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE---------EeccCCCeeE----------EeccccccC
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~----------~~l~gH~~~   65 (120)
                      +|.++|.+++  +||+.+.....     .....|.+.-..+.         ++-+.|+.+.          ..+ .-..+
T Consensus       179 lL~~asd~G~VtlwDv~g~sp~~-----~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l-~y~~P  252 (673)
T KOG4378|consen  179 LLSIASDKGAVTLWDVQGMSPIF-----HASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRL-TYSHP  252 (673)
T ss_pred             eeEeeccCCeEEEEeccCCCccc-----chhhhccCCcCcceecCCccceEEEecccceEEEeeccccccccee-eecCC
Confidence            5778999999  99998644332     23445554333222         3334555543          111 23557


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhh
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKRE  114 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~  114 (120)
                      ..+|+|+|+|.+|+.|+..|.|.        .||+|-..-|++++.-|.
T Consensus       253 lstvaf~~~G~~L~aG~s~G~~i--------~YD~R~~k~Pv~v~sah~  293 (673)
T KOG4378|consen  253 LSTVAFSECGTYLCAGNSKGELI--------AYDMRSTKAPVAVRSAHD  293 (673)
T ss_pred             cceeeecCCceEEEeecCCceEE--------EEecccCCCCceEeeecc
Confidence            88999999999999999999988        899999999999998874

>KOG0307|consensus

Probab=98.04  E-value=1.1e-05  Score=69.39  Aligned_cols=99  Identities=11%  Similarity=0.008  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE---------EeccCCCee-E-----------Eecc
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVV-K-----------HVLE   60 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v-~-----------~~l~   60 (120)
                      =+|+||||+.|+.  |||+.+.......+.. .   -...|.++.         .+++.++.+ .           .+..
T Consensus       128 q~nlLASGa~~geI~iWDlnn~~tP~~~~~~-~---~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~  203 (1049)
T KOG0307|consen  128 QGNLLASGADDGEILIWDLNKPETPFTPGSQ-A---PPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDT  203 (1049)
T ss_pred             CCceeeccCCCCcEEEeccCCcCCCCCCCCC-C---CcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccC
Confidence            4579999999999  9999864332221110 0   011232221         122223221 1           2222


Q ss_pred             ccccCeEEEEEcCCCC-EEEEEeCCC---CEEecCCCCceEeeCCCCccchhhhhhhh
Q psy75            61 GHDRGVNWACFHPTLP-LIVSGKGLC---LLDHGPNLFPVVLDSSDFFVPIAKLEKRE  114 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~-~laSgs~D~---~iki~~~~~~~~~~~~~~~~~~~~~~~~~  114 (120)
                      +-...+..++|||+.. .|+.+++|.   .|.        +||+|....|+.++++|+
T Consensus       204 ~~~~~~S~l~WhP~~aTql~~As~dd~~Pviq--------lWDlR~assP~k~~~~H~  253 (1049)
T KOG0307|consen  204 PGRMHCSVLAWHPDHATQLLVASGDDSAPVIQ--------LWDLRFASSPLKILEGHQ  253 (1049)
T ss_pred             CCccceeeeeeCCCCceeeeeecCCCCCceeE--------eecccccCCchhhhcccc
Confidence            2334588999999984 577777654   455        799999999999999994

>KOG0650|consensus

Probab=98.03  E-value=9.2e-06  Score=66.51  Aligned_cols=82  Identities=20%  Similarity=0.136  Sum_probs=54.2

Q ss_pred             CCEEEEEcCCCc-eE-ecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE------------------
Q psy75             5 FRLVLSSTPDHH-HK-QNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK------------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t-lW-di~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~------------------   56 (120)
                      |.-|+.+|.|+. +| |++-..+..     .++.-|...+.++.        .+++.|+++.                  
T Consensus       619 GDnli~gs~d~k~~WfDldlsskPy-----k~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVP  693 (733)
T KOG0650|consen  619 GDNLILGSYDKKMCWFDLDLSSKPY-----KTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVP  693 (733)
T ss_pred             CCeEEEecCCCeeEEEEcccCcchh-----HHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEe
Confidence            467888999999 77 554211110     13344444433321        1233344432                  


Q ss_pred             -EeccccccC----eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 -HVLEGHDRG----VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 -~~l~gH~~~----V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                       +.|.||...    |..+.|||..++|.|++.|++|++|.
T Consensus       694 lK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlfT  733 (733)
T KOG0650|consen  694 LKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLFT  733 (733)
T ss_pred             eeeccCceeecccceEeecccCCCceEEecCCCceEEeeC
Confidence             788898765    99999999999999999999999874

>KOG1274|consensus

Probab=98.01  E-value=3.8e-05  Score=65.19  Aligned_cols=87  Identities=13%  Similarity=0.045  Sum_probs=57.4

Q ss_pred             CCCCCEEEEEcCCCc--eEecCCCceee-----ccCCcceEeeccCCCceEEEeccCCCe----------eEEecccccc
Q psy75             2 RAIFRLVLSSTPDHH--HKQNAQLRKKN-----VAPGMGGLEEHLRNPSSTDLFGQADAV----------VKHVLEGHDR   64 (120)
Q Consensus         2 ~~~~~~L~S~s~D~t--lWdi~~~~~~~-----~~~~~~~l~~h~~~v~~~~~~~~~D~~----------v~~~l~gH~~   64 (120)
                      +-+.+++++|+.|++  .+.+.++....     ..|....-..+.   ......|+.|-.          ..+++.||.+
T Consensus        63 a~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~---g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~a  139 (933)
T KOG1274|consen   63 ACYSNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGS---GKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDA  139 (933)
T ss_pred             eecccceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecC---CcEEEeecCceeEEEEeccccchheeecccCC
Confidence            446789999999999  88886543221     111110000111   011233344433          3488999999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +|.++.|+|++.+||+.+-||+++||.
T Consensus       140 pVl~l~~~p~~~fLAvss~dG~v~iw~  166 (933)
T KOG1274|consen  140 PVLQLSYDPKGNFLAVSSCDGKVQIWD  166 (933)
T ss_pred             ceeeeeEcCCCCEEEEEecCceEEEEE
Confidence            999999999999999999999999543

>KOG1407|consensus

Probab=97.98  E-value=8.5e-06  Score=61.09  Aligned_cols=33  Identities=15%  Similarity=0.117  Sum_probs=30.2

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEe
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDH   89 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki   89 (120)
                      +.+..+.-+|..++||-||++|||||+|..|-|
T Consensus       225 R~isRldwpVRTlSFS~dg~~lASaSEDh~IDI  257 (313)
T KOG1407|consen  225 RCISRLDWPVRTLSFSHDGRMLASASEDHFIDI  257 (313)
T ss_pred             eeeccccCceEEEEeccCcceeeccCccceEEe
Confidence            566778899999999999999999999999888

>KOG1446|consensus

Probab=97.96  E-value=5.9e-05  Score=57.40  Aligned_cols=41  Identities=22%  Similarity=0.203  Sum_probs=32.9

Q ss_pred             CCCeeEEeccccccCe---EEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            51 ADAVVKHVLEGHDRGV---NWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        51 ~D~~v~~~l~gH~~~V---~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .+|+++.++.+|.+.=   -+..|.||++.+++|+.|++|.+|.
T Consensus       217 f~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~  260 (311)
T KOG1446|consen  217 FDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWN  260 (311)
T ss_pred             cCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEE
Confidence            4566667887776654   5889999999999999999999654

>KOG2048|consensus

Probab=97.94  E-value=7e-05  Score=61.85  Aligned_cols=88  Identities=16%  Similarity=0.035  Sum_probs=56.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCC-cce-EeeccCCCceEEEeccCCCeeE------------EeccccccCeEE
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPG-MGG-LEEHLRNPSSTDLFGQADAVVK------------HVLEGHDRGVNW   68 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~-~~~-l~~h~~~v~~~~~~~~~D~~v~------------~~l~gH~~~V~~   68 (120)
                      ++.|.|.+.+++  -||+.+++.+..... ..+ +.-.....++....++.||.+.            ..|....+.|.+
T Consensus        80 ~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLs  159 (691)
T KOG2048|consen   80 GGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLS  159 (691)
T ss_pred             CCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEE
Confidence            467889999998  899987654432111 000 0000011122333444555332            566667899999


Q ss_pred             EEEcCCCCEEEEEeCCCCEEecCC
Q psy75            69 ACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        69 v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ++|+|++..||+||.|+.|++|+-
T Consensus       160 lsw~~~~~~i~~Gs~Dg~Iriwd~  183 (691)
T KOG2048|consen  160 LSWNPTGTKIAGGSIDGVIRIWDV  183 (691)
T ss_pred             EEecCCccEEEecccCceEEEEEc
Confidence            999999999999999999996654

>KOG0288|consensus

Probab=97.93  E-value=2.6e-06  Score=66.93  Aligned_cols=87  Identities=18%  Similarity=0.117  Sum_probs=61.6

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~~   65 (120)
                      ..|++|+.|..  +|+..+.+...    ..++.+..+.++.+        .+.++.|+.++          .+|.||+..
T Consensus       188 dtlatgg~Dr~Ik~W~v~~~k~~~----~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdk  263 (459)
T KOG0288|consen  188 DTLATGGSDRIIKLWNVLGEKSEL----ISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDK  263 (459)
T ss_pred             chhhhcchhhhhhhhhcccchhhh----hhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccc
Confidence            47899999998  99987543211    12444444444432        34455566443          799999999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCCCCce
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPNLFPV   96 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~~~~~   96 (120)
                      |+++.|......++||+.|++||+|+=+..+
T Consensus       264 Vt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~  294 (459)
T KOG0288|consen  264 VTAAKFKLSHSRVVSGSADRTIKLWDLQKAY  294 (459)
T ss_pred             eeeehhhccccceeeccccchhhhhhhhhhh
Confidence            9999999876679999999999988754433

>KOG0288|consensus

Probab=97.93  E-value=4.3e-05  Score=60.20  Aligned_cols=28  Identities=11%  Similarity=0.018  Sum_probs=25.2

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ..+.+.|||++.++|+||.||.|+||.-
T Consensus       389 DwtrvvfSpd~~YvaAGS~dgsv~iW~v  416 (459)
T KOG0288|consen  389 DWTRVVFSPDGSYVAAGSADGSVYIWSV  416 (459)
T ss_pred             ccceeEECCCCceeeeccCCCcEEEEEc
Confidence            3889999999999999999999997653

>KOG0321|consensus

Probab=97.89  E-value=6.1e-05  Score=62.05  Aligned_cols=79  Identities=11%  Similarity=-0.027  Sum_probs=51.0

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE-------------------
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK-------------------   56 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~-------------------   56 (120)
                      +|++++.|.|  +||+.+.+....    +.+.+|...+.+.         -..|+.|+.++                   
T Consensus       114 ~lVsasGDsT~r~Wdvk~s~l~G~----~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~  189 (720)
T KOG0321|consen  114 LLVSASGDSTIRPWDVKTSRLVGG----RLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRI  189 (720)
T ss_pred             eEEEccCCceeeeeeeccceeecc----eeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhh
Confidence            6899999999  999987554432    2355676655431         12344444432                   


Q ss_pred             ------------------EeccccccCeEE---EEEcCCCCEEEEEeC-CCCEEe
Q psy75            57 ------------------HVLEGHDRGVNW---ACFHPTLPLIVSGKG-LCLLDH   89 (120)
Q Consensus        57 ------------------~~l~gH~~~V~~---v~fsp~~~~laSgs~-D~~iki   89 (120)
                                        ..-.+|...|.+   +.+.-|...|||++. |+.||+
T Consensus       190 ~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKV  244 (720)
T KOG0321|consen  190 YGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKV  244 (720)
T ss_pred             hccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEE
Confidence                              111245556666   666678889999998 999993

>KOG0299|consensus

Probab=97.89  E-value=2.9e-05  Score=61.71  Aligned_cols=90  Identities=13%  Similarity=0.121  Sum_probs=61.8

Q ss_pred             EEEEEcCCCc--eEecCCCcee-eccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEeC
Q psy75             7 LVLSSTPDHH--HKQNAQLRKK-NVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKG   83 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~-~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~   83 (120)
                      ++.|+|.|++  -|++.+++.. ...+..-.+..|...             .+..-.+|...|.+++.||||++||+|+.
T Consensus       156 ~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~-------------~k~~r~~h~keil~~avS~Dgkylatgg~  222 (479)
T KOG0299|consen  156 RVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNP-------------LKESRKGHVKEILTLAVSSDGKYLATGGR  222 (479)
T ss_pred             ceeecCCCcceeeeehhcCcccccccccchhhhhccCC-------------CCcccccccceeEEEEEcCCCcEEEecCC
Confidence            6788999988  6888665443 111110001111110             01111489999999999999999999999


Q ss_pred             CCCEEecCCCCceEeeCCCCccchhhhhhhhhhhh
Q psy75            84 LCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        84 D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
                      |+.|-        +||..+ ..++.+|.+|++.++
T Consensus       223 d~~v~--------Iw~~~t-~ehv~~~~ghr~~V~  248 (479)
T KOG0299|consen  223 DRHVQ--------IWDCDT-LEHVKVFKGHRGAVS  248 (479)
T ss_pred             CceEE--------EecCcc-cchhhccccccccee
Confidence            99998        667455 788999999998874

>KOG0646|consensus

Probab=97.86  E-value=6.6e-05  Score=59.72  Aligned_cols=81  Identities=12%  Similarity=0.025  Sum_probs=58.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE------------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK------------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~------------------   56 (120)
                      |.+|+.|.-.+.  +|.+.+++...      .+..|-..+.|+.|        +++.|+.|.                  
T Consensus        93 G~~l~ag~i~g~lYlWelssG~LL~------v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p  166 (476)
T KOG0646|consen   93 GYFLLAGTISGNLYLWELSSGILLN------VLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKP  166 (476)
T ss_pred             ceEEEeecccCcEEEEEeccccHHH------HHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccc
Confidence            556777655555  99998876543      45667777776543        455666553                  


Q ss_pred             -EeccccccCeEEEEEcCCC--CEEEEEeCCCCEEecC
Q psy75            57 -HVLEGHDRGVNWACFHPTL--PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 -~~l~gH~~~V~~v~fsp~~--~~laSgs~D~~iki~~   91 (120)
                       ..+..|+-+|+.+...+-|  ..++|+|.|++||+|+
T Consensus       167 ~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wd  204 (476)
T KOG0646|consen  167 LHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWD  204 (476)
T ss_pred             eeeeccCcceeEEEEecCCCccceEEEecCCceEEEEE
Confidence             6788999999998876653  5899999999999654

>KOG1034|consensus

Probab=97.85  E-value=4.3e-05  Score=58.85  Aligned_cols=52  Identities=21%  Similarity=0.259  Sum_probs=42.7

Q ss_pred             EeccccccCeEEEEEcCCC-CEEEEEeCCCCEEecCCCCceEeeCCCCccchhhh---hhhhhhh
Q psy75            57 HVLEGHDRGVNWACFHPTL-PLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKL---EKREGRA  117 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~-~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  117 (120)
                      ..+.||..+|+.+.|+|+. ++++|||.|.+||        +|++++ ..+++.|   |+||+|+
T Consensus       129 ~~~~ghG~sINeik~~p~~~qlvls~SkD~svR--------lwnI~~-~~Cv~VfGG~egHrdeV  184 (385)
T KOG1034|consen  129 KNYRGHGGSINEIKFHPDRPQLVLSASKDHSVR--------LWNIQT-DVCVAVFGGVEGHRDEV  184 (385)
T ss_pred             cceeccCccchhhhcCCCCCcEEEEecCCceEE--------EEeccC-CeEEEEecccccccCcE
Confidence            6778999999999999987 5899999999999        777776 5666654   6677765

>KOG2445|consensus

Probab=97.85  E-value=2e-05  Score=60.22  Aligned_cols=82  Identities=17%  Similarity=0.025  Sum_probs=53.5

Q ss_pred             CEEEEEcCCCc-eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCee--EEeccccccCeEEEEEcCCCCEEEEEe
Q psy75             6 RLVLSSTPDHH-HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVV--KHVLEGHDRGVNWACFHPTLPLIVSGK   82 (120)
Q Consensus         6 ~~L~S~s~D~t-lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v--~~~l~gH~~~V~~v~fsp~~~~laSgs   82 (120)
                      .+||.|+.||. ||++...+..-.      -+..... +.     -.|-.+  ...+.+|...|+.+.|+-.|.+|+|.+
T Consensus       240 ~~lAvA~kDgv~I~~v~~~~s~i~------~ee~~~~-~~-----~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStG  307 (361)
T KOG2445|consen  240 HLLAVATKDGVRIFKVKVARSAIE------EEEVLAP-DL-----MTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTG  307 (361)
T ss_pred             eeEEEeecCcEEEEEEeeccchhh------hhcccCC-CC-----ccccceEEeeeccCCCCceEEEEEeeeeeEEeecC
Confidence            47889999988 998864321100      0000000 00     011222  246789999999999999999999999


Q ss_pred             CCCCEEecCCCCceEee
Q psy75            83 GLCLLDHGPNLFPVVLD   99 (120)
Q Consensus        83 ~D~~iki~~~~~~~~~~   99 (120)
                      .||++|+|+-.|-=.|+
T Consensus       308 dDG~VRLWkany~n~~k  324 (361)
T KOG2445|consen  308 DDGCVRLWKANYNNLWK  324 (361)
T ss_pred             CCceeeehhhhhhhhhe
Confidence            99999999884433333

>KOG0640|consensus

Probab=97.83  E-value=4.7e-05  Score=58.55  Aligned_cols=88  Identities=22%  Similarity=0.195  Sum_probs=56.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceE--eecc-CCCc----eEEEec--------cCCCe--eE-Eec-cccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGL--EEHL-RNPS----STDLFG--------QADAV--VK-HVL-EGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l--~~h~-~~v~----~~~~~~--------~~D~~--v~-~~l-~gH~   63 (120)
                      ++||+|++.|.+  +|++.+++....+.+..+.  ..|. ..+.    ...++.        ++|..  .+ ..+ -||+
T Consensus       317 ~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn  396 (430)
T KOG0640|consen  317 GKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHN  396 (430)
T ss_pred             CeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCC
Confidence            579999999999  9999887765443221000  0110 0111    111221        11111  01 122 3899


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +.+.++.-||.++.+++||.|..+++|.+
T Consensus       397 ~a~R~i~HSP~~p~FmTcsdD~raRFWyr  425 (430)
T KOG0640|consen  397 GAVRWIVHSPVEPAFMTCSDDFRARFWYR  425 (430)
T ss_pred             CCceEEEeCCCCCceeeecccceeeeeee
Confidence            99999999999999999999999999875

>KOG0290|consensus

Probab=97.83  E-value=7.7e-05  Score=56.84  Aligned_cols=46  Identities=20%  Similarity=0.106  Sum_probs=38.4

Q ss_pred             CCeeEEeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCcc
Q psy75            52 DAVVKHVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFV  105 (120)
Q Consensus        52 D~~v~~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~  105 (120)
                      .++++..|-+|...|..|+|...+. .+||.+.||.+|        +||.|..-+
T Consensus       185 ~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvR--------mFDLR~leH  231 (364)
T KOG0290|consen  185 SGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVR--------MFDLRSLEH  231 (364)
T ss_pred             ccceeeEEEecCcceeEEEeccCccceEEEecCCCcEE--------EEEeccccc
Confidence            4567788889999999999999774 799999999999        777776543

>KOG0303|consensus

Probab=97.81  E-value=7.3e-06  Score=64.32  Aligned_cols=59  Identities=19%  Similarity=0.063  Sum_probs=49.5

Q ss_pred             EeccccccCeEEEEEcCCC-CEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            57 HVLEGHDRGVNWACFHPTL-PLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~-~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      ..+.||++.|..++|+|.. ..|||||+|.+|+||.=+..++.  ++...|+..|++|..|+
T Consensus        75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~--~~ltepvv~L~gH~rrV  134 (472)
T KOG0303|consen   75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLT--RDLTEPVVELYGHQRRV  134 (472)
T ss_pred             CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccc--cCcccceEEEeecceeE
Confidence            4678999999999999976 57999999999998877666664  46679999999996654

>KOG1538|consensus

Probab=97.80  E-value=2.7e-05  Score=64.81  Aligned_cols=49  Identities=14%  Similarity=0.113  Sum_probs=45.4

Q ss_pred             eEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            44 STDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        44 ~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .+.++...||+..+++.||...|++|+|+.||+++|||+.|+.+.+|..
T Consensus        34 rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~   82 (1081)
T KOG1538|consen   34 RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTS   82 (1081)
T ss_pred             EEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecc
Confidence            3566777899999999999999999999999999999999999999988

>KOG1272|consensus

Probab=97.78  E-value=4.3e-05  Score=61.07  Aligned_cols=44  Identities=9%  Similarity=-0.024  Sum_probs=37.7

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchh
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIA  108 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~  108 (120)
                      ..+-.|.++|.+|+++|+|+++||.+.|+.+|        +||.|+|-.+..
T Consensus       287 vKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~k--------IWDlR~~~ql~t  330 (545)
T KOG1272|consen  287 VKILCHRGPVSSIAVDRGGRYMATTGLDRKVK--------IWDLRNFYQLHT  330 (545)
T ss_pred             HHHHhcCCCcceEEECCCCcEEeeccccccee--------Eeeeccccccce
Confidence            44557999999999999999999999999999        888888765443

>KOG1310|consensus

Probab=97.74  E-value=8.1e-05  Score=60.80  Aligned_cols=85  Identities=18%  Similarity=0.078  Sum_probs=60.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce----------EEEeccCCCeeE----------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS----------TDLFGQADAVVK----------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~----------~~~~~~~D~~v~----------------   56 (120)
                      |.+|+|||.|..  +||.-..+...     ..-.+|.+.|.+          +.+++..|+.|+                
T Consensus        62 G~lL~SGSDD~r~ivWd~~~~Kllh-----sI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~  136 (758)
T KOG1310|consen   62 GELLASGSDDTRLIVWDPFEYKLLH-----SISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGM  136 (758)
T ss_pred             CCEEeecCCcceEEeecchhcceee-----eeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCc
Confidence            679999999987  99986433221     112356665544          344555566554                


Q ss_pred             ----EeccccccCeEEEEEcCCC-CEEEEEeCCCCEEecCCCCceEeeCCC
Q psy75            57 ----HVLEGHDRGVNWACFHPTL-PLIVSGKGLCLLDHGPNLFPVVLDSSD  102 (120)
Q Consensus        57 ----~~l~gH~~~V~~v~fsp~~-~~laSgs~D~~iki~~~~~~~~~~~~~  102 (120)
                          ..+.-|...|..++--|++ ..+-|+|+||+|+        -+|.|.
T Consensus       137 ~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtir--------QyDiRE  179 (758)
T KOG1310|consen  137 EETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIR--------QYDIRE  179 (758)
T ss_pred             cchhhhhhhhhhhhhheecCCCCCceEEEecCCccee--------eecccC
Confidence                2334588999999999999 5799999999999        778776

>KOG1274|consensus

Probab=97.73  E-value=0.00017  Score=61.36  Aligned_cols=88  Identities=14%  Similarity=-0.084  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcc-eEeeccCCCce---------EEEeccCCCeeE----------Eecc--
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMG-GLEEHLRNPSS---------TDLFGQADAVVK----------HVLE--   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~-~l~~h~~~v~~---------~~~~~~~D~~v~----------~~l~--   60 (120)
                      +++||+++.||+  +||+..+......+... .+.--...+.+         ..+....|+.|+          ..|.  
T Consensus       150 ~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~  229 (933)
T KOG1274|consen  150 GNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDK  229 (933)
T ss_pred             CCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeeccc
Confidence            578999999999  99998654333222110 00000011111         112223355554          3443  


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      -|.+.+..++|+|+|++||+++-|+.|-||+-
T Consensus       230 ~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv  261 (933)
T KOG1274|consen  230 LSSSKFSDLQWSPNGKYIAASTLDGQILVWNV  261 (933)
T ss_pred             ccccceEEEEEcCCCcEEeeeccCCcEEEEec
Confidence            34555999999999999999999999996654

>KOG4283|consensus

Probab=97.67  E-value=0.00014  Score=55.59  Aligned_cols=80  Identities=16%  Similarity=0.020  Sum_probs=55.5

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE-------------------
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK-------------------   56 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~-------------------   56 (120)
                      ++|+|-.|-.  +-|+.++...      .++.+|..+|-.+         ...++.|+.++                   
T Consensus       160 LiA~gtr~~~VrLCDi~SGs~s------H~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~  233 (397)
T KOG4283|consen  160 LIAAGTRDVQVRLCDIASGSFS------HTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNT  233 (397)
T ss_pred             EEEEecCCCcEEEEeccCCcce------eeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccC
Confidence            3444444444  7787665432      2567777766543         33455666654                   


Q ss_pred             ------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 ------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                            ++-..|.+.|+.++|..++..+++++-|..+++|..
T Consensus       234 k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~  275 (397)
T KOG4283|consen  234 KRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNM  275 (397)
T ss_pred             ccCccccccccccceeeeeeecccchhhhhccCccceEEeec
Confidence                  223468899999999999999999999999998765

>KOG2919|consensus

Probab=97.67  E-value=0.00014  Score=56.18  Aligned_cols=51  Identities=24%  Similarity=0.212  Sum_probs=44.5

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeC-CCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKG-LCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~-D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      +.+.||.++|+-+.|+++|..|.||+. |-.|-        +||+|..--|+..|+.|.+
T Consensus       244 ~llggh~gGvThL~~~edGn~lfsGaRk~dkIl--------~WDiR~~~~pv~~L~rhv~  295 (406)
T KOG2919|consen  244 QLLGGHGGGVTHLQWCEDGNKLFSGARKDDKIL--------CWDIRYSRDPVYALERHVG  295 (406)
T ss_pred             eeecccCCCeeeEEeccCcCeecccccCCCeEE--------EEeehhccchhhhhhhhcc
Confidence            778899999999999999999999875 44555        8999999999999999976

>KOG4227|consensus

Probab=97.66  E-value=0.00015  Score=57.37  Aligned_cols=87  Identities=22%  Similarity=0.125  Sum_probs=58.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeec--cCCCceE--------EEeccCCCeeE-------Eec--cccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEH--LRNPSST--------DLFGQADAVVK-------HVL--EGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h--~~~v~~~--------~~~~~~D~~v~-------~~l--~gH~   63 (120)
                      +++||||+.|..  +|+++..-.. ..|.+..+.+|  ...+.|+        .++|..+++|.       +++  ..|.
T Consensus        68 ~~~L~SGGDD~~~~~W~~de~~~~-k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~  146 (609)
T KOG4227|consen   68 DRFLASGGDDMHGRVWNVDELMVR-KTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANEN  146 (609)
T ss_pred             CeEEeecCCcceeeeechHHHHhh-cCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeeccc
Confidence            579999999998  9998642211 12222223333  3344443        45666777764       222  2454


Q ss_pred             c---CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            64 R---GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        64 ~---~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .   .|.-+.-||...+|++.+.|+.+-+|++
T Consensus       147 ~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~  178 (609)
T KOG4227|consen  147 NNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDN  178 (609)
T ss_pred             CcccceeecccCCCCceEEEEecCceEEEEec
Confidence            4   8999999999999999999999996655

>KOG0278|consensus

Probab=97.63  E-value=2e-05  Score=59.04  Aligned_cols=101  Identities=21%  Similarity=0.186  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eeccccc
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHD   63 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~   63 (120)
                      ++-+|+|++.|+.  +-+=+++.=.      .+|++|...|.+..        .+++.|=+.+          ++| .|.
T Consensus        28 ~g~flisa~kd~~pmlr~g~tgdwi------gtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf-~hk  100 (334)
T KOG0278|consen   28 DGYFLISASKDGKPMLRNGDTGDWI------GTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSF-EHK  100 (334)
T ss_pred             CceEEEEeccCCCchhccCCCCCcE------EeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhh-hhh
Confidence            4668999999998  4333332222      36889988775421        1233332222          344 488


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhhc
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRARK  119 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (120)
                      -.|.+++|+.|.+.|++|+.++.+|        +||...-.-|..++.+|-+-+|+
T Consensus       101 hivk~~af~~ds~~lltgg~ekllr--------vfdln~p~App~E~~ghtg~Ir~  148 (334)
T KOG0278|consen  101 HIVKAVAFSQDSNYLLTGGQEKLLR--------VFDLNRPKAPPKEISGHTGGIRT  148 (334)
T ss_pred             heeeeEEecccchhhhccchHHHhh--------hhhccCCCCCchhhcCCCCccee
Confidence            8999999999999999999999999        55555556677777777665553

>KOG1524|consensus

Probab=97.60  E-value=0.00015  Score=59.07  Aligned_cols=41  Identities=15%  Similarity=-0.004  Sum_probs=35.0

Q ss_pred             ccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEee
Q psy75            59 LEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLD   99 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~   99 (120)
                      ..+|.+-|-++.|||.+.+|+||++|-+.|+|+..-.-+|-
T Consensus       182 WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~  222 (737)
T KOG1524|consen  182 WRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFT  222 (737)
T ss_pred             EeccCcEEEEeecCccccceeecCCceeEEeecccCccccc
Confidence            35899999999999999999999999999999874444443

>KOG1007|consensus

Probab=97.59  E-value=0.0002  Score=54.59  Aligned_cols=46  Identities=17%  Similarity=0.285  Sum_probs=41.6

Q ss_pred             cccccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhh
Q psy75            60 EGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKR  113 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~  113 (120)
                      .+|...|..+.|+|+-+ .||||++|+.|+        +||-|....|+..|++|
T Consensus       211 dAHgq~vrdlDfNpnkq~~lvt~gDdgyvr--------iWD~R~tk~pv~el~~H  257 (370)
T KOG1007|consen  211 DAHGQRVRDLDFNPNKQHILVTCGDDGYVR--------IWDTRKTKFPVQELPGH  257 (370)
T ss_pred             hhhcceeeeccCCCCceEEEEEcCCCccEE--------EEeccCCCccccccCCC
Confidence            37999999999999976 699999999999        77889999999999988

>KOG0974|consensus

Probab=97.55  E-value=0.00022  Score=61.25  Aligned_cols=83  Identities=13%  Similarity=-0.032  Sum_probs=61.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE---------Eecccccc-Ce
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK---------HVLEGHDR-GV   66 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~---------~~l~gH~~-~V   66 (120)
                      +.+++|+|+|.+  +|++++.+...     -+.-+|++.+...      .++.+.|.+++         .++.+|.. .|
T Consensus       187 g~~i~s~SdDRsiRlW~i~s~~~~~-----~~~fgHsaRvw~~~~~~n~i~t~gedctcrvW~~~~~~l~~y~~h~g~~i  261 (967)
T KOG0974|consen  187 GRYIASVSDDRSIRLWPIDSREVLG-----CTGFGHSARVWACCFLPNRIITVGEDCTCRVWGVNGTQLEVYDEHSGKGI  261 (967)
T ss_pred             CcEEEEEecCcceeeeecccccccC-----cccccccceeEEEEeccceeEEeccceEEEEEecccceehhhhhhhhcce
Confidence            679999999999  99998644322     1234577666542      33445566655         46778865 69


Q ss_pred             EEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            67 NWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        67 ~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +.++.+++..+++|++.|+++|+|.-
T Consensus       262 w~~~~~~~~~~~vT~g~Ds~lk~~~l  287 (967)
T KOG0974|consen  262 WKIAVPIGVIIKVTGGNDSTLKLWDL  287 (967)
T ss_pred             eEEEEcCCceEEEeeccCcchhhhhh
Confidence            99999999999999999999998765

>KOG0294|consensus

Probab=97.53  E-value=0.00023  Score=54.67  Aligned_cols=75  Identities=16%  Similarity=0.272  Sum_probs=57.3

Q ss_pred             eEeeccCCCceEE------EeccCCCeeE----------EeccccccCeEEEEEcCCCC--EEEEEeCCCCEEecCCCCc
Q psy75            34 GLEEHLRNPSSTD------LFGQADAVVK----------HVLEGHDRGVNWACFHPTLP--LIVSGKGLCLLDHGPNLFP   95 (120)
Q Consensus        34 ~l~~h~~~v~~~~------~~~~~D~~v~----------~~l~gH~~~V~~v~fsp~~~--~laSgs~D~~iki~~~~~~   95 (120)
                      .+..|...+.++.      .+|+.|.++.          ..+-.|.+.|+++.|.|+-.  .|+||++||.|.       
T Consensus        38 ~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~-------  110 (362)
T KOG0294|consen   38 AFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHII-------  110 (362)
T ss_pred             cccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEE-------
Confidence            3557777777653      4567787775          45567999999999999875  799999999999       


Q ss_pred             eEeeCCCCccchhhhhhhhhhh
Q psy75            96 VVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                       +||... |..+..|+.|.+++
T Consensus       111 -iw~~~~-W~~~~slK~H~~~V  130 (362)
T KOG0294|consen  111 -IWRVGS-WELLKSLKAHKGQV  130 (362)
T ss_pred             -EEEcCC-eEEeeeeccccccc
Confidence             666666 57788888776654

>KOG1063|consensus

Probab=97.48  E-value=0.00014  Score=60.46  Aligned_cols=36  Identities=22%  Similarity=0.152  Sum_probs=33.9

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +.+.+|+-.|+.++||||+++|+|.|.|+++.+|..
T Consensus       566 ~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~  601 (764)
T KOG1063|consen  566 QELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEV  601 (764)
T ss_pred             heecccceEEEEEEECCCCcEEEEeecCceEEeeee
Confidence            578899999999999999999999999999999876

>KOG1009|consensus

Probab=97.48  E-value=0.00016  Score=56.88  Aligned_cols=37  Identities=27%  Similarity=0.162  Sum_probs=35.0

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNL   93 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~   93 (120)
                      .+|.+|..+||+|-|+|+|.+||||++++.+-+|+..
T Consensus        59 s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~   95 (434)
T KOG1009|consen   59 SSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQG   95 (434)
T ss_pred             ecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEec
Confidence            6888999999999999999999999999999999874

>KOG2110|consensus

Probab=97.48  E-value=0.0012  Score=51.57  Aligned_cols=32  Identities=13%  Similarity=0.183  Sum_probs=29.3

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEE
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLD   88 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~ik   88 (120)
                      ..+..|.+.|.+++|||+|.+|||+|+-|||.
T Consensus       167 ~~I~aH~~~lAalafs~~G~llATASeKGTVI  198 (391)
T KOG2110|consen  167 NTINAHKGPLAALAFSPDGTLLATASEKGTVI  198 (391)
T ss_pred             eEEEecCCceeEEEECCCCCEEEEeccCceEE
Confidence            67789999999999999999999999988754

>KOG0650|consensus

Probab=97.42  E-value=7e-05  Score=61.49  Aligned_cols=104  Identities=18%  Similarity=0.250  Sum_probs=62.9

Q ss_pred             EEEEEcCCCc-eEecCCCceee-ccCCc---ceEeeccCCCceEEEeccCCCeeE-----------EeccccccCeEEEE
Q psy75             7 LVLSSTPDHH-HKQNAQLRKKN-VAPGM---GGLEEHLRNPSSTDLFGQADAVVK-----------HVLEGHDRGVNWAC   70 (120)
Q Consensus         7 ~L~S~s~D~t-lWdi~~~~~~~-~~~~~---~~l~~h~~~v~~~~~~~~~D~~v~-----------~~l~gH~~~V~~v~   70 (120)
                      +|+.|+.... +||+....... ..++.   +.+.-|..+.|  .+.++.|+.+.           +++.-|...|.+|+
T Consensus       580 ~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDn--li~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va  657 (733)
T KOG0650|consen  580 YLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDN--LILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVA  657 (733)
T ss_pred             eEEEEeccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCe--EEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhh
Confidence            4555555556 99986422211 11111   22333333322  23344444432           67778999999999


Q ss_pred             EcCCCCEEEEEeCCCCEEecCCCCceEee---CCCCccchhhhhhhhh
Q psy75            71 FHPTLPLIVSGKGLCLLDHGPNLFPVVLD---SSDFFVPIAKLEKREG  115 (120)
Q Consensus        71 fsp~~~~laSgs~D~~iki~~~~~~~~~~---~~~~~~~~~~~~~~~~  115 (120)
                      ||+.-++++|||.|+++.++-+   -+|.   -...-.||..|.+|+-
T Consensus       658 ~H~ryPLfas~sdDgtv~Vfhg---~VY~Dl~qnpliVPlK~L~gH~~  702 (733)
T KOG0650|consen  658 FHKRYPLFASGSDDGTVIVFHG---MVYNDLLQNPLIVPLKRLRGHEK  702 (733)
T ss_pred             hccccceeeeecCCCcEEEEee---eeehhhhcCCceEeeeeccCcee
Confidence            9999999999999999996433   0222   0122588999988853

>KOG1539|consensus

Probab=97.41  E-value=0.0011  Score=56.15  Aligned_cols=82  Identities=10%  Similarity=0.041  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCeeE----------Eeccccc
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVVK----------HVLEGHD   63 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v~----------~~l~gH~   63 (120)
                      |.|.|+-|+.++.  ||++.+++....      +.++...+.+        +...|..+|+|.          .+|.-..
T Consensus       171 YLNKIvvGs~~G~lql~Nvrt~K~v~~------f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~  244 (910)
T KOG1539|consen  171 YLNKIVVGSSQGRLQLWNVRTGKVVYT------FQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDW  244 (910)
T ss_pred             heeeEEEeecCCcEEEEEeccCcEEEE------ecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccc
Confidence            7788999999998  999988776653      4444444433        445566777764          4554335


Q ss_pred             cCeEEEEEcCCCC-EEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHPTLP-LIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~~-~laSgs~D~~iki~~   91 (120)
                      +.|++++|..||+ ++|+|+..|.+-+|+
T Consensus       245 g~VtslSFrtDG~p~las~~~~G~m~~wD  273 (910)
T KOG1539|consen  245 GRVTSLSFRTDGNPLLASGRSNGDMAFWD  273 (910)
T ss_pred             cceeEEEeccCCCeeEEeccCCceEEEEE
Confidence            8999999999995 799999889999765

>KOG1408|consensus

Probab=97.40  E-value=0.00051  Score=57.84  Aligned_cols=84  Identities=18%  Similarity=0.142  Sum_probs=58.0

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCC-------CceEEE-eccCCCee----------EEeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRN-------PSSTDL-FGQADAVV----------KHVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~-------v~~~~~-~~~~D~~v----------~~~l~gH~~~   65 (120)
                      +++++++.|+.  |+|+.+++.+....+.   .+|.+.       +.++.+ .+..|+++          .....||...
T Consensus       609 k~v~t~cQDrnirif~i~sgKq~k~FKgs---~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~  685 (1080)
T KOG1408|consen  609 KLVVTVCQDRNIRIFDIESGKQVKSFKGS---RDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEA  685 (1080)
T ss_pred             ceEEEEecccceEEEeccccceeeeeccc---ccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchh
Confidence            58899999988  9999887766543321   112221       111111 22234443          3566799999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      |+.+.|.+|.+.|+|.+.|+.|.+|+=
T Consensus       686 VTG~kF~nDCkHlISvsgDgCIFvW~l  712 (1080)
T KOG1408|consen  686 VTGVKFLNDCKHLISVSGDGCIFVWKL  712 (1080)
T ss_pred             eeeeeecccchhheeecCCceEEEEEC
Confidence            999999999999999999999996654

>KOG0649|consensus

Probab=97.36  E-value=0.00069  Score=50.75  Aligned_cols=42  Identities=17%  Similarity=0.057  Sum_probs=34.4

Q ss_pred             CCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            51 ADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        51 ~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .|+.+.+++.||+.-|.+|+--.-...|.||++||++|+|+.
T Consensus       144 E~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~  185 (325)
T KOG0649|consen  144 EDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDT  185 (325)
T ss_pred             cCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEec
Confidence            567788999999999999998444456789999999995443

>KOG1408|consensus

Probab=97.24  E-value=0.00044  Score=58.17  Aligned_cols=49  Identities=18%  Similarity=0.106  Sum_probs=39.1

Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      .+...++.+++.||+|+.||||..-|+++        +||.-+ ...+-.+|.||.|+
T Consensus       456 ~d~r~G~R~~~vSp~gqhLAsGDr~Gnlr--------Vy~Lq~-l~~~~~~eAHesEi  504 (1080)
T KOG1408|consen  456 CDSRFGFRALAVSPDGQHLASGDRGGNLR--------VYDLQE-LEYTCFMEAHESEI  504 (1080)
T ss_pred             cCcccceEEEEECCCcceecccCccCceE--------EEEehh-hhhhhheeccccee
Confidence            34577899999999999999999999999        777665 33466677777665

>KOG2111|consensus

Probab=97.23  E-value=0.0015  Score=50.18  Aligned_cols=28  Identities=11%  Similarity=0.143  Sum_probs=25.1

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEe
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDH   89 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki   89 (120)
                      ..+.|.+++|||++.+||.+|+-+|+.|
T Consensus       225 d~A~iy~iaFSp~~s~LavsSdKgTlHi  252 (346)
T KOG2111|consen  225 DRADIYCIAFSPNSSWLAVSSDKGTLHI  252 (346)
T ss_pred             chheEEEEEeCCCccEEEEEcCCCeEEE
Confidence            4567999999999999999999999995

>KOG1523|consensus

Probab=97.22  E-value=0.0013  Score=50.58  Aligned_cols=30  Identities=17%  Similarity=0.076  Sum_probs=27.5

Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEe
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDH   89 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki   89 (120)
                      ..+.+.|++++|||++-+++.||-|+++++
T Consensus       143 kPirStv~sldWhpnnVLlaaGs~D~k~rV  172 (361)
T KOG1523|consen  143 KPIRSTVTSLDWHPNNVLLAAGSTDGKCRV  172 (361)
T ss_pred             CccccceeeeeccCCcceecccccCcceeE
Confidence            457888999999999999999999999998

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=97.21  E-value=0.0078  Score=43.67  Aligned_cols=33  Identities=15%  Similarity=0.119  Sum_probs=26.0

Q ss_pred             cccCeEEEEEcCCCCEEEEE-eCCCCEEecCCCCceEeeCCC
Q psy75            62 HDRGVNWACFHPTLPLIVSG-KGLCLLDHGPNLFPVVLDSSD  102 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSg-s~D~~iki~~~~~~~~~~~~~  102 (120)
                      +...+.+++|+|+++.|+++ +.+++|+        +||...
T Consensus       247 ~~~~~~~~~~~~~g~~l~~~~~~~~~i~--------v~d~~~  280 (300)
T TIGR03866       247 VGQRVWQLAFTPDEKYLLTTNGVSNDVS--------VIDVAA  280 (300)
T ss_pred             eCCCcceEEECCCCCEEEEEcCCCCeEE--------EEECCC
Confidence            44578999999999988776 4689999        666554

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1310|consensus

Probab=97.19  E-value=0.0012  Score=54.09  Aligned_cols=78  Identities=19%  Similarity=0.261  Sum_probs=54.4

Q ss_pred             ceEeeccCCCceEE--------EeccCCCeeE----------Eec-cccccCeEEEEEcCCC--CEEEEEeCCCCEEecC
Q psy75            33 GGLEEHLRNPSSTD--------LFGQADAVVK----------HVL-EGHDRGVNWACFHPTL--PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        33 ~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l-~gH~~~V~~v~fsp~~--~~laSgs~D~~iki~~   91 (120)
                      ..+.+|.+.||++.        ++|+.|.-+.          .++ +||.+.|.++.|-|..  ++++||+.|..|+   
T Consensus        44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~---  120 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK---  120 (758)
T ss_pred             hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE---
Confidence            35789999998853        4566554332          333 5999999999999964  6899999999999   


Q ss_pred             CCCceEeeCCC---------Cccchhhhhhhhhhhh
Q psy75            92 NLFPVVLDSSD---------FFVPIAKLEKREGRAR  118 (120)
Q Consensus        92 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~  118 (120)
                           +||..+         .-.+++-..-|-.|+.
T Consensus       121 -----lfdl~~~~~~~~d~~~~~~~~~~~cht~rVK  151 (758)
T KOG1310|consen  121 -----LFDLDSSKEGGMDHGMEETTRCWSCHTDRVK  151 (758)
T ss_pred             -----EEecccccccccccCccchhhhhhhhhhhhh
Confidence                 777553         2344554555555544

>KOG0642|consensus

Probab=97.18  E-value=0.00089  Score=54.54  Aligned_cols=60  Identities=17%  Similarity=-0.067  Sum_probs=45.9

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceE--eeCCCCccchhhhhhhhhhh
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVV--LDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  117 (120)
                      .+|.+|.++|-||+..++++.+.||+-|++|+.|+-+ |=.  +|..|-..=...|+||.+.+
T Consensus       338 ~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p-~n~dp~ds~dp~vl~~~l~Ghtdav  399 (577)
T KOG0642|consen  338 LTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLP-PNQDPDDSYDPSVLSGTLLGHTDAV  399 (577)
T ss_pred             EEEecccCceEEEEecCCceEEEeeccCceeeeeccC-CCCCcccccCcchhccceeccccce
Confidence            7889999999999999999999999999999999554 322  34444334355677776644

>KOG2106|consensus

Probab=97.15  E-value=0.0029  Score=51.42  Aligned_cols=39  Identities=10%  Similarity=-0.017  Sum_probs=34.2

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCc
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFP   95 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~   95 (120)
                      .+..||....+.++-||+..++++++.|+.+++|+.-+|
T Consensus       362 ~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k~  400 (626)
T KOG2106|consen  362 LTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHKL  400 (626)
T ss_pred             EEEEecccceeeEEcCCChhheeeccCcceEEEccCCce
Confidence            445689999999999999999999999999999996443

>KOG0307|consensus

Probab=97.13  E-value=0.0007  Score=58.71  Aligned_cols=36  Identities=25%  Similarity=0.277  Sum_probs=33.3

Q ss_pred             EeccccccCeEEEEEcCCC-CEEEEEeCCCCEEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTL-PLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~-~~laSgs~D~~iki~~~   92 (120)
                      +++++|..+|.+++|.+.+ .+++|++.|+.|.+|+-
T Consensus       247 k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~  283 (1049)
T KOG0307|consen  247 KILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNP  283 (1049)
T ss_pred             hhhcccccceeeeccCCCCchhhhcccCCCCeeEecC
Confidence            7789999999999999987 78999999999999876

>KOG0771|consensus

Probab=97.13  E-value=0.0009  Score=52.66  Aligned_cols=33  Identities=15%  Similarity=-0.092  Sum_probs=28.5

Q ss_pred             ccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            59 LEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ...|.+.|.++.|+|||+.|+|-+.| ..++|..
T Consensus       182 e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~  214 (398)
T KOG0771|consen  182 EIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSV  214 (398)
T ss_pred             hHhhcCccccceeCCCCcEEEEecCC-ceEEEEe
Confidence            34799999999999999999999999 9994443

>KOG0644|consensus

Probab=97.10  E-value=0.00022  Score=60.64  Aligned_cols=75  Identities=19%  Similarity=0.214  Sum_probs=59.0

Q ss_pred             eEeeccCCCceEE--------EeccCCCeeE----------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCc
Q psy75            34 GLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFP   95 (120)
Q Consensus        34 ~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~   95 (120)
                      .+.+|...|+|..        +.++.|..++          .+..||...|+..+-+.+...+|++|.|..|+       
T Consensus       185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIr-------  257 (1113)
T KOG0644|consen  185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIR-------  257 (1113)
T ss_pred             HHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEE-------
Confidence            3557777777632        3344454444          56679999999999999988999999999999       


Q ss_pred             eEeeCCCCccchhhhhhhhhhh
Q psy75            96 VVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                       +|-.++ ..|+++|-+|+|-+
T Consensus       258 -vWrl~~-~~pvsvLrghtgav  277 (1113)
T KOG0644|consen  258 -VWRLPD-GAPVSVLRGHTGAV  277 (1113)
T ss_pred             -EEecCC-CchHHHHhccccce
Confidence             667688 99999999998754

>KOG0974|consensus

Probab=97.09  E-value=0.0056  Score=52.90  Aligned_cols=35  Identities=17%  Similarity=0.003  Sum_probs=32.6

Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .+.||.+.|.++.|+-||++++|.|+|+++|+|+=
T Consensus       170 ~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i  204 (967)
T KOG0974|consen  170 RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPI  204 (967)
T ss_pred             eecccCCceEEEEEccCCcEEEEEecCcceeeeec
Confidence            47899999999999999999999999999998764

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=97.07  E-value=0.015  Score=42.14  Aligned_cols=83  Identities=12%  Similarity=0.126  Sum_probs=45.1

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCc---ceEeeccCCCceEE-EeccCCCeeE----------EeccccccCeEEE
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGM---GGLEEHLRNPSSTD-LFGQADAVVK----------HVLEGHDRGVNWA   69 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~---~~l~~h~~~v~~~~-~~~~~D~~v~----------~~l~gH~~~V~~v   69 (120)
                      ++++|++.|++  +||+.++.........   ..+.-  ....... +.+..++.++          ..+..+. .+..+
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l~~--~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~   78 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQRPRGITL--SKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP-DPELF   78 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECCCCCCceEE--CCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-CccEE
Confidence            57899999999  9999765433221110   00000  0001111 2223334332          3343333 35688


Q ss_pred             EEcCCCCEE-EEEeCCCCEEecC
Q psy75            70 CFHPTLPLI-VSGKGLCLLDHGP   91 (120)
Q Consensus        70 ~fsp~~~~l-aSgs~D~~iki~~   91 (120)
                      +|+|+++.+ ++++.|+.+++|+
T Consensus        79 ~~~~~g~~l~~~~~~~~~l~~~d  101 (300)
T TIGR03866        79 ALHPNGKILYIANEDDNLVTVID  101 (300)
T ss_pred             EECCCCCEEEEEcCCCCeEEEEE
Confidence            999999865 5556789999654

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG2106|consensus

Probab=97.07  E-value=0.0043  Score=50.47  Aligned_cols=28  Identities=7%  Similarity=0.042  Sum_probs=26.1

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      +..+++++|+|+|..||-||-|+.|.||
T Consensus       447 ~~~ls~v~ysp~G~~lAvgs~d~~iyiy  474 (626)
T KOG2106|consen  447 NEQLSVVRYSPDGAFLAVGSHDNHIYIY  474 (626)
T ss_pred             CCceEEEEEcCCCCEEEEecCCCeEEEE
Confidence            7789999999999999999999999964

>KOG0321|consensus

Probab=97.01  E-value=0.0017  Score=53.86  Aligned_cols=37  Identities=27%  Similarity=0.415  Sum_probs=32.4

Q ss_pred             EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCC
Q psy75            57 HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSS  101 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~  101 (120)
                      ..+.||...|.+++|+|+.+ .|++|+.|+.|.        +||.|
T Consensus       138 ~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~il--------lWD~R  175 (720)
T KOG0321|consen  138 RLNLGHTGSVKSECFMPTNPAVFCTGGRDGEIL--------LWDCR  175 (720)
T ss_pred             eeecccccccchhhhccCCCcceeeccCCCcEE--------EEEEe
Confidence            34679999999999999986 699999999999        77765

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=96.96  E-value=0.009  Score=43.54  Aligned_cols=35  Identities=29%  Similarity=0.280  Sum_probs=30.3

Q ss_pred             EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~   91 (120)
                      ..+.+|...|.+++|+|+++ .+++++.|+++++|+
T Consensus       192 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd  227 (466)
T COG2319         192 STLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWD  227 (466)
T ss_pred             EeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEE
Confidence            56678999999999999998 677779999999773

>KOG0280|consensus

Probab=96.96  E-value=0.0035  Score=47.91  Aligned_cols=41  Identities=24%  Similarity=0.246  Sum_probs=33.4

Q ss_pred             cccccCeEEEEEcCC-CCEEEEEeCCCCEEecCCCCceEeeCCCCccchh
Q psy75            60 EGHDRGVNWACFHPT-LPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIA  108 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~-~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~  108 (120)
                      .-|+.+|.+|.-||- ...|++||.|..|+        +||-|+.-.||.
T Consensus       207 kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~--------~~DtRnm~kPl~  248 (339)
T KOG0280|consen  207 KVHTSGVVSIYSSPPKPTYIATGSYDECIR--------VLDTRNMGKPLF  248 (339)
T ss_pred             eeeecceEEEecCCCCCceEEEecccccee--------eeehhcccCccc
Confidence            368999999999886 45899999999999        667677666664

>KOG2055|consensus

Probab=96.94  E-value=0.0019  Score=51.82  Aligned_cols=30  Identities=13%  Similarity=0.078  Sum_probs=26.3

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .-..|+|++|||.+..+|-|-.++.+.+|+
T Consensus       481 ~vg~vtc~aFSP~sG~lAvGNe~grv~l~k  510 (514)
T KOG2055|consen  481 KVGHVTCMAFSPNSGYLAVGNEAGRVHLFK  510 (514)
T ss_pred             cccceEEEEecCCCceEEeecCCCceeeEe
Confidence            445699999999999999999999999764

>KOG4378|consensus

Probab=96.92  E-value=0.0012  Score=53.54  Aligned_cols=33  Identities=24%  Similarity=0.186  Sum_probs=28.1

Q ss_pred             cccccCeEEEEEcCCCC-EEEEEeCCCCEEecCC
Q psy75            60 EGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPN   92 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~   92 (120)
                      +.|.++...|+|+|..+ +|||.+.|++|.+|+.
T Consensus       205 ~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~  238 (673)
T KOG4378|consen  205 EAHSAPCRGICFSPSNEALLVSVGYDKKINIYDI  238 (673)
T ss_pred             hhccCCcCcceecCCccceEEEecccceEEEeec
Confidence            46999999999999875 7999999999995554

>KOG1334|consensus

Probab=96.79  E-value=0.0025  Score=51.52  Aligned_cols=81  Identities=16%  Similarity=0.041  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE-------------E
Q psy75             3 AIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK-------------H   57 (120)
Q Consensus         3 ~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~-------------~   57 (120)
                      .++..|+|||.|.+  +||......+..     -..+|...+....          ..++.|++++             .
T Consensus       152 ~~Gd~l~SgSDD~~vv~WdW~~~~~~l~-----f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~  226 (559)
T KOG1334|consen  152 QRGDVLASGSDDLQVVVWDWVSGSPKLS-----FESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTK  226 (559)
T ss_pred             ccCceeeccCccceEEeehhhccCcccc-----cccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecce
Confidence            36889999999999  999865433221     1235555443322          2334577765             3


Q ss_pred             eccccccCeEEEEEcCCCC-EEEEEeCCCCEE
Q psy75            58 VLEGHDRGVNWACFHPTLP-LIVSGKGLCLLD   88 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~-~laSgs~D~~ik   88 (120)
                      .+..|.+.|+.++.-|+.+ -|.|++.|+.++
T Consensus       227 rl~~h~g~vhklav~p~sp~~f~S~geD~~v~  258 (559)
T KOG1334|consen  227 RLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVF  258 (559)
T ss_pred             ecccccCccceeeecCCCCCccccccccccee
Confidence            4557999999999999986 599999999888

>KOG1587|consensus

Probab=96.76  E-value=0.008  Score=49.66  Aligned_cols=40  Identities=15%  Similarity=0.007  Sum_probs=30.2

Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCC---CceE
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNL---FPVV   97 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~---~~~~   97 (120)
                      .+..|...|.++.++|.+..++..+.|-++|||...   .|..
T Consensus       393 ~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~  435 (555)
T KOG1587|consen  393 TFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLL  435 (555)
T ss_pred             cccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcch
Confidence            344688899999999999754444449999999884   5555

>KOG2394|consensus

Probab=96.76  E-value=0.0017  Score=52.99  Aligned_cols=30  Identities=23%  Similarity=0.234  Sum_probs=26.6

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      --++..||+|||||++||+|++|-.|.+|-
T Consensus       331 YFGGLLCvcWSPDGKyIvtGGEDDLVtVwS  360 (636)
T KOG2394|consen  331 YFGGLLCVCWSPDGKYIVTGGEDDLVTVWS  360 (636)
T ss_pred             hccceEEEEEcCCccEEEecCCcceEEEEE
Confidence            456899999999999999999999988853

>KOG1240|consensus

Probab=96.58  E-value=0.014  Score=51.66  Aligned_cols=41  Identities=17%  Similarity=0.118  Sum_probs=31.2

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecCCCC--ceE-eeCCC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLF--PVV-LDSSD  102 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~--~~~-~~~~~  102 (120)
                      ..+.|++++.+|.+.++++|+.-|.+-+|+=-|  |++ |.++.
T Consensus      1194 ~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~ 1237 (1431)
T KOG1240|consen 1194 RHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPA 1237 (1431)
T ss_pred             cccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcc
Confidence            355799999999999999999999999766533  333 55554

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=96.57  E-value=0.037  Score=39.48  Aligned_cols=30  Identities=3%  Similarity=-0.116  Sum_probs=22.7

Q ss_pred             cccCeEEEEEcCCCCEEEEEeC------CCCEEecC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKG------LCLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~------D~~iki~~   91 (120)
                      +...++.++|+|+|+.|++++.      |+.++||.
T Consensus       142 ~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~  177 (194)
T PF08662_consen  142 EHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWS  177 (194)
T ss_pred             ccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEE
Confidence            3446889999999999888874      66677543

>KOG4227|consensus

Probab=96.37  E-value=0.0015  Score=51.88  Aligned_cols=54  Identities=17%  Similarity=-0.015  Sum_probs=41.0

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhh
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKR  113 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~  113 (120)
                      +-+.+|.+.|+++.||.++++||||++|..+++|.-.++.+-   ..-.||..++.+
T Consensus        50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~---k~~KPI~~~~~~  103 (609)
T KOG4227|consen   50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVR---KTPKPIGVMEHP  103 (609)
T ss_pred             hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhh---cCCCCceeccCc
Confidence            566799999999999999999999999999997765444332   223566665544

>KOG4714|consensus

Probab=96.35  E-value=0.0052  Score=46.41  Aligned_cols=40  Identities=20%  Similarity=0.178  Sum_probs=33.2

Q ss_pred             eccccccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceE
Q psy75            58 VLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVV   97 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~   97 (120)
                      .+..|.++|+.|-|||..+ .|.++|+||.+..|+.--.++
T Consensus       218 ~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~~l  258 (319)
T KOG4714|consen  218 LLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTTFL  258 (319)
T ss_pred             HHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCceE
Confidence            4668999999999999874 688999999999888753333

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.35  E-value=0.009  Score=33.42  Aligned_cols=28  Identities=21%  Similarity=0.124  Sum_probs=25.0

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      .+.|.+++|+|...+||.|+.||.|-++
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~   38 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVY   38 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEE
Confidence            4569999999999999999999999853

>KOG2919|consensus

Probab=96.28  E-value=0.0075  Score=46.82  Aligned_cols=80  Identities=19%  Similarity=0.222  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC--CCc-eEecCCCceeeccCCcceEeeccCCCceE-----------EEeccCCCeeE-----------Ee
Q psy75             4 IFRLVLSSTP--DHH-HKQNAQLRKKNVAPGMGGLEEHLRNPSST-----------DLFGQADAVVK-----------HV   58 (120)
Q Consensus         4 ~~~~L~S~s~--D~t-lWdi~~~~~~~~~~~~~~l~~h~~~v~~~-----------~~~~~~D~~v~-----------~~   58 (120)
                      .++.|.||+.  |+. .||+...+..-     -.+..|....|..           ..+|+.|+.|+           .+
T Consensus       261 dGn~lfsGaRk~dkIl~WDiR~~~~pv-----~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv  335 (406)
T KOG2919|consen  261 DGNKLFSGARKDDKILCWDIRYSRDPV-----YALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSV  335 (406)
T ss_pred             CcCeecccccCCCeEEEEeehhccchh-----hhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccc
Confidence            4678888885  444 89997533211     1355565544432           23455677775           34


Q ss_pred             ccccccCeEEEEEcCCCCEEEEEeCCCCEE
Q psy75            59 LEGHDRGVNWACFHPTLPLIVSGKGLCLLD   88 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~~~~laSgs~D~~ik   88 (120)
                      +..|...||.|++||-.+++|++|..+..+
T Consensus       336 ~~~~sd~vNgvslnP~mpilatssGqr~f~  365 (406)
T KOG2919|consen  336 TGNYSDTVNGVSLNPIMPILATSSGQRIFK  365 (406)
T ss_pred             cccccccccceecCcccceeeeccCceeec
Confidence            456888999999999999999998665444

>KOG3881|consensus

Probab=96.27  E-value=0.028  Score=44.38  Aligned_cols=36  Identities=19%  Similarity=0.104  Sum_probs=32.1

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ..+.|-.++|.+|..||..+++|||+-|+-+||++-
T Consensus       284 ~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~  319 (412)
T KOG3881|consen  284 CGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDI  319 (412)
T ss_pred             cccCCccCCcceEEEcCCCceEEeeccceeEEEeec
Confidence            347788999999999999999999999999998665

>KOG1524|consensus

Probab=96.26  E-value=0.0076  Score=49.52  Aligned_cols=36  Identities=6%  Similarity=0.081  Sum_probs=33.8

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +.+.+|.++|.+-.|||||.-|+|+++||.||||-+
T Consensus        98 ~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr  133 (737)
T KOG1524|consen   98 RSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR  133 (737)
T ss_pred             hhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec
Confidence            677899999999999999999999999999999876

>KOG2110|consensus

Probab=96.22  E-value=0.031  Score=43.81  Aligned_cols=69  Identities=7%  Similarity=0.015  Sum_probs=48.0

Q ss_pred             eEecCCCceeeccCCcceEeeccCCCceEEEe--------ccCCCeeE-----------Eeccc--cccCeEEEEEcCCC
Q psy75            17 HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF--------GQADAVVK-----------HVLEG--HDRGVNWACFHPTL   75 (120)
Q Consensus        17 lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~--------~~~D~~v~-----------~~l~g--H~~~V~~v~fsp~~   75 (120)
                      +||..+.+..      ..+..|...+-++.|+        ++..|+|.           +.|..  -...|.+++|||++
T Consensus       157 l~d~~nl~~v------~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds  230 (391)
T KOG2110|consen  157 LFDTINLQPV------NTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDS  230 (391)
T ss_pred             EEEcccceee------eEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCC
Confidence            8888765443      3567788777765543        34556665           33332  23357899999999


Q ss_pred             CEEEEEeCCCCEEecC
Q psy75            76 PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        76 ~~laSgs~D~~iki~~   91 (120)
                      +.|++.|+.+||.+++
T Consensus       231 ~~L~~sS~TeTVHiFK  246 (391)
T KOG2110|consen  231 QFLAASSNTETVHIFK  246 (391)
T ss_pred             CeEEEecCCCeEEEEE
Confidence            9999999999999754

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=96.17  E-value=0.11  Score=37.73  Aligned_cols=37  Identities=27%  Similarity=0.289  Sum_probs=31.4

Q ss_pred             EEeccccccCeEEEEEcCCCCEEEEEeC-CCCEEecCC
Q psy75            56 KHVLEGHDRGVNWACFHPTLPLIVSGKG-LCLLDHGPN   92 (120)
Q Consensus        56 ~~~l~gH~~~V~~v~fsp~~~~laSgs~-D~~iki~~~   92 (120)
                      ...+.+|...|..++|+|++..+++++. |+.+++|.-
T Consensus       148 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (466)
T COG2319         148 IRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDL  185 (466)
T ss_pred             EEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEc
Confidence            3567789999999999999998888886 999995544

>KOG2048|consensus

Probab=96.09  E-value=0.025  Score=47.24  Aligned_cols=46  Identities=9%  Similarity=-0.102  Sum_probs=38.5

Q ss_pred             EEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            45 TDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        45 ~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      +.||.+.++++.+++..|.+.|.+++-.+++..+++++.|++|.-+
T Consensus       227 V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~  272 (691)
T KOG2048|consen  227 VTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQY  272 (691)
T ss_pred             EEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEE
Confidence            4455556677778889999999999999999999999999988763

>KOG1188|consensus

Probab=95.99  E-value=0.055  Score=42.19  Aligned_cols=62  Identities=11%  Similarity=-0.000  Sum_probs=40.9

Q ss_pred             EEeccCCCeeE------------Eeccccc-cCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhh
Q psy75            46 DLFGQADAVVK------------HVLEGHD-RGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        46 ~~~~~~D~~v~------------~~l~gH~-~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~  111 (120)
                      .++++.||+|+            ...++|+ .+-++++-+...+++++|    +-....+.+.|+||.|.-..+++.+.
T Consensus        87 v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~G----tE~~~s~A~v~lwDvR~~qq~l~~~~  161 (376)
T KOG1188|consen   87 VISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACG----TELTRSDASVVLWDVRSEQQLLRQLN  161 (376)
T ss_pred             eEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEec----cccccCceEEEEEEeccccchhhhhh
Confidence            34556677776            3344555 456677777677777766    44555667778899998777776654

>KOG1517|consensus

Probab=95.92  E-value=0.059  Score=47.52  Aligned_cols=83  Identities=16%  Similarity=0.019  Sum_probs=50.0

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCc-----ceEeeccCCCceEEEeccCCCeeE-------------EeccccccC-
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGM-----GGLEEHLRNPSSTDLFGQADAVVK-------------HVLEGHDRG-   65 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~-----~~l~~h~~~v~~~~~~~~~D~~v~-------------~~l~gH~~~-   65 (120)
                      +|++++.-..  |||...-......|..     .++.+.... .++.+.|-.||.++             .....|+.. 
T Consensus      1179 ~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~-gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~ 1257 (1387)
T KOG1517|consen 1179 HLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVH-GNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVE 1257 (1387)
T ss_pred             eEEecCCeeEEEEEecccceeEeecccCCCccceeecccccC-CceEEEeecCCceEEeecccCCccccceeecccCCcc
Confidence            4444444333  9999753333333321     112211111 23445555688876             344568877 


Q ss_pred             -eEEEEEcCCCC-EEEEEeCCCCEEec
Q psy75            66 -VNWACFHPTLP-LIVSGKGLCLLDHG   90 (120)
Q Consensus        66 -V~~v~fsp~~~-~laSgs~D~~iki~   90 (120)
                       |.-+.+.+.|- -|+|||.||.|++|
T Consensus      1258 ~Iv~~slq~~G~~elvSgs~~G~I~~~ 1284 (1387)
T KOG1517|consen 1258 PIVHLSLQRQGLGELVSGSQDGDIQLL 1284 (1387)
T ss_pred             cceeEEeecCCCcceeeeccCCeEEEE
Confidence             99999999885 49999999999943

>KOG1273|consensus

Probab=95.74  E-value=0.14  Score=39.87  Aligned_cols=35  Identities=6%  Similarity=0.013  Sum_probs=29.5

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccc
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVP  106 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~  106 (120)
                      ..|.++-|+..|+.|+.-+.|+.||        +|+..+...+
T Consensus       197 ~~IK~I~~s~~g~~liiNtsDRvIR--------~ye~~di~~~  231 (405)
T KOG1273|consen  197 QAIKQIIVSRKGRFLIINTSDRVIR--------TYEISDIDDE  231 (405)
T ss_pred             eeeeEEEEeccCcEEEEecCCceEE--------EEehhhhccc
Confidence            6778889999999999999999999        8887765543

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=95.71  E-value=0.025  Score=40.37  Aligned_cols=30  Identities=13%  Similarity=-0.068  Sum_probs=23.4

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCC---CCEEecC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGL---CLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D---~~iki~~   91 (120)
                      +...++.|.|||+|+.||.|+.+   |.|.+|+
T Consensus        99 ~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd  131 (194)
T PF08662_consen   99 GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWD  131 (194)
T ss_pred             cCCCceEEEECCCCCEEEEEEccCCCcEEEEEE
Confidence            46788999999999999988754   4588433

>KOG0771|consensus

Probab=95.48  E-value=0.019  Score=45.38  Aligned_cols=43  Identities=12%  Similarity=0.109  Sum_probs=35.0

Q ss_pred             EEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhh
Q psy75            67 NWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        67 ~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
                      .+++|+++|..+++|+.|+++|        +|+-++ +.++.++.+|++|+.
T Consensus       148 k~vaf~~~gs~latgg~dg~lR--------v~~~Ps-~~t~l~e~~~~~eV~  190 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLR--------VWEWPS-MLTILEEIAHHAEVK  190 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEE--------EEecCc-chhhhhhHhhcCccc
Confidence            6899999999999999999999        666666 556677777776664

>KOG1538|consensus

Probab=95.42  E-value=0.022  Score=48.15  Aligned_cols=44  Identities=14%  Similarity=0.030  Sum_probs=27.4

Q ss_pred             EEEEEcCCCc-eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE
Q psy75             7 LVLSSTPDHH-HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK   56 (120)
Q Consensus         7 ~L~S~s~D~t-lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~   56 (120)
                      .|+-+..|+. ++|.+.+...      +++.+|...|+|+.+        +|+.|+.|.
T Consensus        26 qL~lAAg~rlliyD~ndG~ll------qtLKgHKDtVycVAys~dGkrFASG~aDK~VI   78 (1081)
T KOG1538|consen   26 QLILAAGSRLLVYDTSDGTLL------QPLKGHKDTVYCVAYAKDGKRFASGSADKSVI   78 (1081)
T ss_pred             eEEEecCCEEEEEeCCCcccc------cccccccceEEEEEEccCCceeccCCCceeEE
Confidence            3444444666 8998754433      368889888888643        345566554

>KOG4190|consensus

Probab=95.40  E-value=0.033  Score=46.30  Aligned_cols=36  Identities=14%  Similarity=0.035  Sum_probs=29.5

Q ss_pred             eEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            55 VKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        55 v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +..++..|..+|+++-|--+.+.++|+  |+-|.+|+-
T Consensus       776 CQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWDP  811 (1034)
T KOG4190|consen  776 CQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWDP  811 (1034)
T ss_pred             eeeEhhhccCcccceeeeeccceeeec--cCcceeecc
Confidence            446788999999999999998888877  788995553

>KOG4714|consensus

Probab=95.36  E-value=0.017  Score=43.78  Aligned_cols=46  Identities=20%  Similarity=0.411  Sum_probs=41.1

Q ss_pred             CeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhh
Q psy75            65 GVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        65 ~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
                      +|.+++-||..+ ++++|++|+.+-        +||+|+..+|...|+-|+.++.
T Consensus       181 ~v~~l~~hp~qq~~v~cgt~dg~~~--------l~d~rn~~~p~S~l~ahk~~i~  227 (319)
T KOG4714|consen  181 AVTALCSHPAQQHLVCCGTDDGIVG--------LWDARNVAMPVSLLKAHKAEIW  227 (319)
T ss_pred             cchhhhCCcccccEEEEecCCCeEE--------EEEcccccchHHHHHHhhhhhh
Confidence            499999999864 788899999999        9999999999999999988765

>KOG3914|consensus

Probab=94.88  E-value=0.12  Score=40.89  Aligned_cols=29  Identities=28%  Similarity=0.238  Sum_probs=23.0

Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      ||..-|..++.-++ ..|+|||.|+++++|
T Consensus       192 GH~eFVS~isl~~~-~~LlS~sGD~tlr~W  220 (390)
T KOG3914|consen  192 GHKEFVSTISLTDN-YLLLSGSGDKTLRLW  220 (390)
T ss_pred             ccHhheeeeeeccC-ceeeecCCCCcEEEE
Confidence            78888888888765 457888889998844

>KOG1334|consensus

Probab=94.76  E-value=0.022  Score=46.20  Aligned_cols=41  Identities=20%  Similarity=0.097  Sum_probs=35.3

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC--CCCceE
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP--NLFPVV   97 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~--~~~~~~   97 (120)
                      +.|.+|.+.|+.|.|+-.|..|+|||.|..+.+|+  .+.|.+
T Consensus       136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l  178 (559)
T KOG1334|consen  136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKL  178 (559)
T ss_pred             hcccCCCCccceeeecccCceeeccCccceEEeehhhccCccc
Confidence            68889999999999999999999999999999754  344444

>PRK01742 tolB translocation protein TolB; Provisional

Probab=94.75  E-value=0.39  Score=38.09  Aligned_cols=34  Identities=9%  Similarity=-0.130  Sum_probs=24.2

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEe-CCCCEEec
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGK-GLCLLDHG   90 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs-~D~~iki~   90 (120)
                      ..+..|...+.+.+|+|||+.|+.++ .++...||
T Consensus       285 ~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~  319 (429)
T PRK01742        285 SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVY  319 (429)
T ss_pred             EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEE
Confidence            34556677788999999999766555 46666654

>KOG1409|consensus

Probab=94.66  E-value=0.36  Score=37.95  Aligned_cols=35  Identities=20%  Similarity=0.198  Sum_probs=32.1

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .++.+|...|.+.+|-|...++.||+.|..+.+|+
T Consensus       191 ~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wd  225 (404)
T KOG1409|consen  191 TTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWD  225 (404)
T ss_pred             EEEcCcccceEEEEEcCCCcEEEeccccCceEEEe
Confidence            78889999999999999999999999999999544

>KOG1963|consensus

Probab=94.46  E-value=0.075  Score=45.38  Aligned_cols=36  Identities=22%  Similarity=0.126  Sum_probs=31.9

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ..+..|...|++++|+++|..|.||+..+-+-.|.-
T Consensus       245 t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~  280 (792)
T KOG1963|consen  245 TLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQL  280 (792)
T ss_pred             eEEEecccccceeEEecCCceEeecccceEEEEEee
Confidence            567789999999999999999999999998887654

>KOG1240|consensus

Probab=94.25  E-value=0.049  Score=48.51  Aligned_cols=39  Identities=18%  Similarity=0.074  Sum_probs=31.0

Q ss_pred             eeEEeccccccCeEEEEEcCCC-CEEEEEeCCCCEEecCC
Q psy75            54 VVKHVLEGHDRGVNWACFHPTL-PLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        54 ~v~~~l~gH~~~V~~v~fsp~~-~~laSgs~D~~iki~~~   92 (120)
                      .+...+.-|...|+.++-++.. .+++|||.||+||+|+-
T Consensus      1039 ~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~ 1078 (1431)
T KOG1240|consen 1039 ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNL 1078 (1431)
T ss_pred             eEeehhhhccccccceeecCCCCceEEEecCCceEEEeee
Confidence            3445666788888888877765 89999999999996654

>KOG4547|consensus

Probab=94.21  E-value=0.34  Score=39.88  Aligned_cols=51  Identities=14%  Similarity=0.226  Sum_probs=39.3

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhh
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
                      ....+....+.+++.+||+.++++||  +.|+        +||..+ ..-+..|.||-+.+|
T Consensus       138 ~~~~~~~~~~~sl~is~D~~~l~~as--~~ik--------~~~~~~-kevv~~ftgh~s~v~  188 (541)
T KOG4547|consen  138 RIWKEQKPLVSSLCISPDGKILLTAS--RQIK--------VLDIET-KEVVITFTGHGSPVR  188 (541)
T ss_pred             eeeccCCCccceEEEcCCCCEEEecc--ceEE--------EEEccC-ceEEEEecCCCcceE
Confidence            44456677889999999999998887  7899        888666 555777888866654

>KOG0309|consensus

Probab=94.07  E-value=0.044  Score=46.77  Aligned_cols=84  Identities=13%  Similarity=0.023  Sum_probs=54.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeecc---------------CCcceE-eeccCCCceEEEec-cCCCeeEEeccccccC
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVA---------------PGMGGL-EEHLRNPSSTDLFG-QADAVVKHVLEGHDRG   65 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~---------------~~~~~l-~~h~~~v~~~~~~~-~~D~~v~~~l~gH~~~   65 (120)
                      +..|++||-|..  .||+.+.......               ..+..+ ..|..   .+.++. ..+++++.++.+|...
T Consensus       127 pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~---~i~vwd~r~gs~pl~s~K~~vs~  203 (1081)
T KOG0309|consen  127 PDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGN---DIFVWDLRKGSTPLCSLKGHVSS  203 (1081)
T ss_pred             CcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCC---ceEEEeccCCCcceEEeccccee
Confidence            467899999987  9999753221100               000000 01111   122232 2356677899999999


Q ss_pred             eEEEEEcCCC-CEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTL-PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~-~~laSgs~D~~iki~~   91 (120)
                      |+.++|+... ..+.+++.|+++|.|+
T Consensus       204 vn~~~fnr~~~s~~~s~~~d~tvkfw~  230 (1081)
T KOG0309|consen  204 VNSIDFNRFKYSEIMSSSNDGTVKFWD  230 (1081)
T ss_pred             eehHHHhhhhhhhhcccCCCCceeeec
Confidence            9999999875 3688999999999865

>KOG2111|consensus

Probab=94.04  E-value=0.1  Score=40.39  Aligned_cols=36  Identities=8%  Similarity=0.135  Sum_probs=30.4

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCC-EEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCL-LDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~-iki~~~   92 (120)
                      ..+.+|.+.|.|++.+-+|.++||+|..|| ||||+.
T Consensus       175 ~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt  211 (346)
T KOG2111|consen  175 SIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDT  211 (346)
T ss_pred             eEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEc
Confidence            456789999999999999999999999887 564443

>KOG2394|consensus

Probab=93.95  E-value=0.058  Score=44.35  Aligned_cols=27  Identities=15%  Similarity=0.126  Sum_probs=24.9

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEe
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDH   89 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki   89 (120)
                      ...|+..+|+|||+.||+.|.|+.+||
T Consensus       290 ~g~in~f~FS~DG~~LA~VSqDGfLRv  316 (636)
T KOG2394|consen  290 EGSINEFAFSPDGKYLATVSQDGFLRI  316 (636)
T ss_pred             cccccceeEcCCCceEEEEecCceEEE
Confidence            348999999999999999999999996

>KOG2055|consensus

Probab=93.71  E-value=0.085  Score=42.60  Aligned_cols=27  Identities=30%  Similarity=0.375  Sum_probs=25.3

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEe
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDH   89 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki   89 (120)
                      .++|++|.|||.-+++++|+.|++++|
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lri  239 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRI  239 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEE
Confidence            558999999999999999999999998

>KOG1587|consensus

Probab=93.47  E-value=0.78  Score=38.16  Aligned_cols=44  Identities=14%  Similarity=0.039  Sum_probs=35.0

Q ss_pred             cccccCeEEEEEcCCCCE--EEEEeCCCCEEecCCCCceEeeCCCCccchhhhh
Q psy75            60 EGHDRGVNWACFHPTLPL--IVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~--laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~  111 (120)
                      ..|...|+.+.|-.+..-  |+|+|.||+|..        |+.+.++.|...++
T Consensus       288 ~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~--------W~~~~l~~P~e~~~  333 (555)
T KOG1587|consen  288 VSHSEPVTAVVWLQNEHNTEFFSLSSDGSICS--------WDTDMLSLPVEGLL  333 (555)
T ss_pred             ccCCcCeEEEEEeccCCCCceEEEecCCcEee--------eeccccccchhhcc
Confidence            368888999988776544  999999999994        48888888877654

>KOG1523|consensus

Probab=93.18  E-value=0.091  Score=40.75  Aligned_cols=39  Identities=21%  Similarity=0.032  Sum_probs=35.0

Q ss_pred             eeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            54 VVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        54 ~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +..+++..|...|+.|+|+|.++.|++|+.|+.-.+|.-
T Consensus        46 ~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~   84 (361)
T KOG1523|consen   46 EPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ   84 (361)
T ss_pred             eeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence            344889999999999999999999999999999998765

>KOG1517|consensus

Probab=93.18  E-value=0.53  Score=41.89  Aligned_cols=84  Identities=14%  Similarity=0.076  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCC--Cce---------EEEeccCCCeeE------------Eec
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRN--PSS---------TDLFGQADAVVK------------HVL   59 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~--v~~---------~~~~~~~D~~v~------------~~l   59 (120)
                      ++++|.|-.||.  ++|........   .......|...  |..         -.++++.||.+.            .++
T Consensus      1221 gn~i~AGfaDGsvRvyD~R~a~~ds---~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~i 1297 (1387)
T KOG1517|consen 1221 GNIIAAGFADGSVRVYDRRMAPPDS---LVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTI 1297 (1387)
T ss_pred             CceEEEeecCCceEEeecccCCccc---cceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCccccccee
Confidence            689999999999  99975311110   00234445443  322         145677788775            112


Q ss_pred             cccc--c-CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            60 EGHD--R-GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        60 ~gH~--~-~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ..|-  + .++++.-|+..+++|||+. +.|+||.-
T Consensus      1298 v~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~ 1332 (1387)
T KOG1517|consen 1298 VAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSL 1332 (1387)
T ss_pred             eeccccCccceeeeeccCCCeeeecCc-ceEEEEec
Confidence            2333  3 4999999999999999998 89997665

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=93.13  E-value=0.1  Score=26.78  Aligned_cols=15  Identities=13%  Similarity=0.016  Sum_probs=13.5

Q ss_pred             CCEEEEEcCCCc--eEe
Q psy75             5 FRLVLSSTPDHH--HKQ   19 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWd   19 (120)
                      +++|+|||.|++  +||
T Consensus        23 ~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen   23 GNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             SSEEEEEETTSEEEEEE
T ss_pred             cccceeeCCCCEEEEEC
Confidence            578999999999  997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG2139|consensus

Probab=93.07  E-value=0.42  Score=37.86  Aligned_cols=29  Identities=7%  Similarity=0.027  Sum_probs=25.0

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .+++.-+.||||+..|..++-|+..++|.
T Consensus       238 lgg~slLkwSPdgd~lfaAt~davfrlw~  266 (445)
T KOG2139|consen  238 LGGFSLLKWSPDGDVLFAATCDAVFRLWQ  266 (445)
T ss_pred             CCceeeEEEcCCCCEEEEecccceeeeeh
Confidence            45677889999999999999999999983

>KOG1064|consensus

Probab=92.85  E-value=0.43  Score=44.61  Aligned_cols=32  Identities=22%  Similarity=0.230  Sum_probs=29.4

Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..|..++++++|-|..++|+||+.+|-+++|+
T Consensus      2333 ~~H~~gaT~l~~~P~~qllisggr~G~v~l~D 2364 (2439)
T KOG1064|consen 2333 TCHDGGATVLAYAPKHQLLISGGRKGEVCLFD 2364 (2439)
T ss_pred             eecCCCceEEEEcCcceEEEecCCcCcEEEee
Confidence            78999999999999999999999999999443

>KOG3914|consensus

Probab=92.39  E-value=0.19  Score=39.77  Aligned_cols=31  Identities=13%  Similarity=0.062  Sum_probs=28.9

Q ss_pred             ccccccCeEEEEEcCCCCEEEEEeCCCCEEe
Q psy75            59 LEGHDRGVNWACFHPTLPLIVSGKGLCLLDH   89 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~~~~laSgs~D~~iki   89 (120)
                      +-||-+.+..|+++||++.|+++..|..||+
T Consensus       147 ~lGhvSml~dVavS~D~~~IitaDRDEkIRv  177 (390)
T KOG3914|consen  147 ILGHVSMLLDVAVSPDDQFIITADRDEKIRV  177 (390)
T ss_pred             hhhhhhhhheeeecCCCCEEEEecCCceEEE
Confidence            3489999999999999999999999999997

>KOG1409|consensus

Probab=92.19  E-value=0.13  Score=40.24  Aligned_cols=46  Identities=17%  Similarity=0.058  Sum_probs=36.2

Q ss_pred             EEEeccCCCeeE-----------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            45 TDLFGQADAVVK-----------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        45 ~~~~~~~D~~v~-----------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      +.+++..|..+.           ..+.||...|..+.+-+--+.+.|++.|+.|-+|
T Consensus       211 ~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w  267 (404)
T KOG1409|consen  211 LLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVW  267 (404)
T ss_pred             EEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEE
Confidence            345666665553           5667899999999988888899999999999964

>KOG0309|consensus

Probab=92.18  E-value=0.21  Score=42.87  Aligned_cols=42  Identities=19%  Similarity=0.319  Sum_probs=35.2

Q ss_pred             CCCeeEEeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecCC
Q psy75            51 ADAVVKHVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPN   92 (120)
Q Consensus        51 ~D~~v~~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~   92 (120)
                      .+..+...+-||+.+|+.+.|+|..+ .++++|-|..+..|+-
T Consensus       102 s~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~  144 (1081)
T KOG0309|consen  102 SSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDM  144 (1081)
T ss_pred             CccceEEEEecCccceeccccCCCCCcceeeccccccceeeec
Confidence            45666788889999999999999986 7999999999985544

>PRK02889 tolB translocation protein TolB; Provisional

Probab=91.87  E-value=2.5  Score=33.48  Aligned_cols=33  Identities=12%  Similarity=-0.157  Sum_probs=21.5

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeC-CCCEEe
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKG-LCLLDH   89 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~-D~~iki   89 (120)
                      ..+..|.......+|+|||+.|+..+. ++...|
T Consensus       277 ~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~I  310 (427)
T PRK02889        277 RRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQI  310 (427)
T ss_pred             EECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEE
Confidence            344455556678899999998776654 344443

>KOG4640|consensus

Probab=91.57  E-value=0.37  Score=40.37  Aligned_cols=49  Identities=18%  Similarity=0.021  Sum_probs=35.8

Q ss_pred             EeccccccCeE-EEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCcc
Q psy75            57 HVLEGHDRGVN-WACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFV  105 (120)
Q Consensus        57 ~~l~gH~~~V~-~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~  105 (120)
                      .++.-|.-.|+ +++|.|||++||-|=.||+|++.+-+-+.....+.+..
T Consensus        55 wtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~  104 (665)
T KOG4640|consen   55 WTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSV  104 (665)
T ss_pred             EeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecccccc
Confidence            34554666666 99999999999999999999997765554444433333

>KOG2321|consensus

Probab=91.44  E-value=1.9  Score=36.08  Aligned_cols=47  Identities=17%  Similarity=0.140  Sum_probs=31.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCC--CCceEeeCCCCccchhhhh
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPN--LFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~--~~~~~~~~~~~~~~~~~~~  111 (120)
                      .|++++|+.+|-.++.|..+|.+-||+=  -.|++.-.-++-.||..|.
T Consensus       230 svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~  278 (703)
T KOG2321|consen  230 SVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLD  278 (703)
T ss_pred             cceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeec
Confidence            4999999998888999999999986432  3333322223344554443

>KOG4532|consensus

Probab=90.47  E-value=3.5  Score=31.68  Aligned_cols=44  Identities=9%  Similarity=0.015  Sum_probs=35.6

Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhh
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEK  112 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~  112 (120)
                      .-+..=.+.+||....++|.++.|+++-        +||+|..-.|.+...+
T Consensus       201 ~t~D~gF~~S~s~~~~~FAv~~Qdg~~~--------I~DVR~~~tpm~~~ss  244 (344)
T KOG4532|consen  201 PTSDHGFYNSFSENDLQFAVVFQDGTCA--------IYDVRNMATPMAEISS  244 (344)
T ss_pred             ccCCCceeeeeccCcceEEEEecCCcEE--------EEEecccccchhhhcc
Confidence            4455667899999999999999999999        8898887777665544

>KOG0649|consensus

Probab=90.18  E-value=2.7  Score=31.94  Aligned_cols=84  Identities=12%  Similarity=0.011  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCcee-eccCCc---ceEeeccCCCceEEEe-----ccCCCeeE-----------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKK-NVAPGM---GGLEEHLRNPSSTDLF-----GQADAVVK-----------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~-~~~~~~---~~l~~h~~~v~~~~~~-----~~~D~~v~-----------------   56 (120)
                      +++|+.|+.+++  +-.+...... ...|+.   -++..|...++.+.+.     .+.|+.++                 
T Consensus        22 ~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gdG~V~gw~W~E~~es~~~K~lw  101 (325)
T KOG0649|consen   22 KQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGDGLVYGWEWNEEEESLATKRLW  101 (325)
T ss_pred             ceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhheeeccCceEEEeeehhhhhhccchhhh
Confidence            578999999999  6666432111 111221   1345777778775543     22356654                 


Q ss_pred             -Eecc-----ccccCeEEEEEcCCCCEEEEEeCCCCEE
Q psy75            57 -HVLE-----GHDRGVNWACFHPTLPLIVSGKGLCLLD   88 (120)
Q Consensus        57 -~~l~-----gH~~~V~~v~fsp~~~~laSgs~D~~ik   88 (120)
                       ....     -....||+....|...-++.++.|+.+.
T Consensus       102 e~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y  139 (325)
T KOG0649|consen  102 EVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIY  139 (325)
T ss_pred             hhcCccccCcccCCccceeEeccCCCcEEEecCCeEEE
Confidence             1111     2345789999999887766777888887

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=89.96  E-value=0.47  Score=39.24  Aligned_cols=32  Identities=13%  Similarity=-0.130  Sum_probs=28.3

Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ...+.|.++++||+...++.|+.||+|.+|+.
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~  288 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDT  288 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEc
Confidence            46778999999999999999999999997665

>KOG2315|consensus

Probab=89.95  E-value=1.1  Score=37.10  Aligned_cols=29  Identities=3%  Similarity=-0.137  Sum_probs=21.3

Q ss_pred             ccCeEEEEEcCCCCEEEEEeC------CCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGKG------LCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~------D~~iki~~   91 (120)
                      ...-+-++|+|||+.|+|+.-      |+.+|||.
T Consensus       354 a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwh  388 (566)
T KOG2315|consen  354 AANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWH  388 (566)
T ss_pred             cCCceEEEEcCCCcEEEEEeccccEEecCCeEEEE
Confidence            334567899999999888863      67777643

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=89.85  E-value=1.6  Score=23.95  Aligned_cols=33  Identities=18%  Similarity=0.328  Sum_probs=23.3

Q ss_pred             cCeEEEEEcCCCC---EEEEEeCCCCEEecCCCCceEeeCC-CCc
Q psy75            64 RGVNWACFHPTLP---LIVSGKGLCLLDHGPNLFPVVLDSS-DFF  104 (120)
Q Consensus        64 ~~V~~v~fsp~~~---~laSgs~D~~iki~~~~~~~~~~~~-~~~  104 (120)
                      ++|.++.|||...   +|+-+-.-+.+-        ++|.| +|.
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vh--------i~D~R~~f~   37 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVH--------IVDTRSNFM   37 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEE--------EEEcccCcc
Confidence            3688999998654   666655556777        78888 443

It contains a characteristic DLL sequence motif.

>KOG1963|consensus

Probab=89.51  E-value=0.4  Score=41.15  Aligned_cols=31  Identities=10%  Similarity=0.110  Sum_probs=28.5

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      |.-.++++++||+++.+|+|..||.|.+|.+
T Consensus       204 Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d  234 (792)
T KOG1963|consen  204 HTFNITCVALSPNERYLAAGDSDGRILVWRD  234 (792)
T ss_pred             hcccceeEEeccccceEEEeccCCcEEEEec
Confidence            5556899999999999999999999999988

>KOG2041|consensus

Probab=89.41  E-value=0.62  Score=40.12  Aligned_cols=36  Identities=17%  Similarity=0.192  Sum_probs=30.7

Q ss_pred             eEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            55 VKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        55 v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      +-+++.||...|.-|.|+-+.+.|-|...+|.|.+|
T Consensus        63 mNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVW   98 (1189)
T KOG2041|consen   63 MNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVW   98 (1189)
T ss_pred             hhhhhccCcceEEEEEeccccccccccCCCceEEEE
Confidence            347899999999999999988888777778888875

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=88.21  E-value=1.4  Score=36.57  Aligned_cols=45  Identities=18%  Similarity=0.195  Sum_probs=31.3

Q ss_pred             EeccCCCeeE--------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            47 LFGQADAVVK--------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        47 ~~~~~D~~v~--------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +.|..|+++.        ..+.-+.=..+.++|||+|..++.|+.-|-+.+|+
T Consensus       275 vlGC~DgSiiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD  327 (545)
T PF11768_consen  275 VLGCEDGSIILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFD  327 (545)
T ss_pred             EEEecCCeEEEEEcCCCeeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEE
Confidence            3455677765        11222233467899999999999999999999443

>KOG0280|consensus

Probab=88.17  E-value=0.62  Score=35.94  Aligned_cols=34  Identities=21%  Similarity=0.109  Sum_probs=29.6

Q ss_pred             EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEec
Q psy75            57 HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHG   90 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~   90 (120)
                      ++.++|.-.++..+|+...+ ++.||++|+.+..|
T Consensus       159 q~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~  193 (339)
T KOG0280|consen  159 QTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCW  193 (339)
T ss_pred             ccccccceeeeeeecccCCCceEEecCCCceEEEE
Confidence            47789999999999998774 89999999999944

>PRK01742 tolB translocation protein TolB; Provisional

Probab=87.95  E-value=0.77  Score=36.41  Aligned_cols=35  Identities=6%  Similarity=-0.090  Sum_probs=27.1

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCC---CEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLC---LLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~---~iki~~   91 (120)
                      +.+.+|...+.+.+|||||+.|+.++.++   .|.+|+
T Consensus       197 ~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~d  234 (429)
T PRK01742        197 FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHD  234 (429)
T ss_pred             eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEe
Confidence            56677888899999999999988887543   466543

>KOG1354|consensus

Probab=87.89  E-value=2.6  Score=33.38  Aligned_cols=37  Identities=11%  Similarity=0.024  Sum_probs=29.6

Q ss_pred             eEEecc-ccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            55 VKHVLE-GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        55 v~~~l~-gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +++.+. +|+-.|++++++.|++.++|+. |=.|.+|.=
T Consensus       155 prRv~aNaHtyhiNSIS~NsD~Et~lSAD-dLRINLWnl  192 (433)
T KOG1354|consen  155 PRRVYANAHTYHINSISVNSDKETFLSAD-DLRINLWNL  192 (433)
T ss_pred             eeeeccccceeEeeeeeecCccceEeecc-ceeeeeccc
Confidence            345554 7999999999999999998875 667887764

>KOG2321|consensus

Probab=87.74  E-value=3  Score=35.02  Aligned_cols=34  Identities=12%  Similarity=0.133  Sum_probs=28.4

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      ..|....+++|+|..+|...+|++|+.|+.+-+|
T Consensus       169 ~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfw  202 (703)
T KOG2321|consen  169 NPFETDSGELNVVSINEEHGLLACGTEDGVVEFW  202 (703)
T ss_pred             cccccccccceeeeecCccceEEecccCceEEEe
Confidence            3444567899999999999999999999999933

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=87.68  E-value=1  Score=34.33  Aligned_cols=39  Identities=5%  Similarity=-0.056  Sum_probs=30.6

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSS  101 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~  101 (120)
                      ...=..++||||+.+||.+...|+|++++..--.+|..+
T Consensus        43 ~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~   81 (282)
T PF15492_consen   43 NPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIP   81 (282)
T ss_pred             CchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcC
Confidence            445568999999999999999999998776545555543

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=87.44  E-value=1.5  Score=33.38  Aligned_cols=34  Identities=12%  Similarity=0.100  Sum_probs=30.0

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDF  103 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~  103 (120)
                      ....|..+..||||+.||+.+-+|.|.        +|+++.+
T Consensus       228 ~~d~i~kmSlSPdg~~La~ih~sG~ls--------LW~iPsL  261 (282)
T PF15492_consen  228 EQDGIFKMSLSPDGSLLACIHFSGSLS--------LWEIPSL  261 (282)
T ss_pred             CCCceEEEEECCCCCEEEEEEcCCeEE--------EEecCcc
Confidence            466899999999999999999999999        7777763

>KOG2695|consensus

Probab=87.28  E-value=1  Score=35.52  Aligned_cols=63  Identities=13%  Similarity=-0.044  Sum_probs=35.2

Q ss_pred             CCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEE--EEcCCCCEE
Q psy75             3 AIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWA--CFHPTLPLI   78 (120)
Q Consensus         3 ~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v--~fsp~~~~l   78 (120)
                      +=.++|++++++++  +||....++..   .                        .++++||.+.-.-+  ..+|....|
T Consensus       309 ~s~q~LmaS~M~gkikLyD~R~~K~~~---~------------------------V~qYeGHvN~~a~l~~~v~~eeg~I  361 (425)
T KOG2695|consen  309 FSQQKLMASDMTGKIKLYDLRATKCKK---S------------------------VMQYEGHVNLSAYLPAHVKEEEGSI  361 (425)
T ss_pred             cccceEeeccCcCceeEeeehhhhccc---c------------------------eeeeecccccccccccccccccceE
Confidence            44578888888887  89886433211   0                        02233443332222  233444567


Q ss_pred             EEEeCCCCEEecCC
Q psy75            79 VSGKGLCLLDHGPN   92 (120)
Q Consensus        79 aSgs~D~~iki~~~   92 (120)
                      +|+++|.-.|||.-
T Consensus       362 ~s~GdDcytRiWsl  375 (425)
T KOG2695|consen  362 FSVGDDCYTRIWSL  375 (425)
T ss_pred             EEccCeeEEEEEec
Confidence            77777877777754

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=86.80  E-value=9.1  Score=28.76  Aligned_cols=27  Identities=0%  Similarity=-0.205  Sum_probs=20.4

Q ss_pred             CeEEEEEcCCCCEEEEEeC-CCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKG-LCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~-D~~iki~~   91 (120)
                      ....++|+|+|+.|+++.. +++|.+|.
T Consensus       275 ~p~~~~~~~dg~~l~va~~~~~~v~v~~  302 (330)
T PRK11028        275 QPRGFNIDHSGKYLIAAGQKSHHISVYE  302 (330)
T ss_pred             cCCceEECCCCCEEEEEEccCCcEEEEE
Confidence            3457899999987666554 89999653

>KOG4547|consensus

Probab=86.77  E-value=4.1  Score=33.78  Aligned_cols=86  Identities=12%  Similarity=-0.004  Sum_probs=50.1

Q ss_pred             CEEEEEcCCCc--eEecCCCceeecc----CCcceEeeccC------CCceEEEeccCCCeeEEeccccccCeEEEEEcC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVA----PGMGGLEEHLR------NPSSTDLFGQADAVVKHVLEGHDRGVNWACFHP   73 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~----~~~~~l~~h~~------~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp   73 (120)
                      .+|-|++.|+.  .|+....+.....    +...++.--..      .-..+.+++..++.+..+|+||.+.|++++|--
T Consensus       115 ~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~  194 (541)
T KOG4547|consen  115 GCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTASRQIKVLDIETKEVVITFTGHGSPVRTLSFTT  194 (541)
T ss_pred             CceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEeccceEEEEEccCceEEEEecCCCcceEEEEEEE
Confidence            46778888887  8877543222111    11111110000      011245566678888899999999999999987


Q ss_pred             C-----CCEEEE-EeCCCCEEecC
Q psy75            74 T-----LPLIVS-GKGLCLLDHGP   91 (120)
Q Consensus        74 ~-----~~~laS-gs~D~~iki~~   91 (120)
                      +     |..+.| ...++-+.+|.
T Consensus       195 ~~~g~~G~~vLssa~~~r~i~~w~  218 (541)
T KOG4547|consen  195 LIDGIIGKYVLSSAAAERGITVWV  218 (541)
T ss_pred             eccccccceeeeccccccceeEEE
Confidence            7     555444 44455555543

>PRK05137 tolB translocation protein TolB; Provisional

Probab=86.75  E-value=6.1  Score=31.28  Aligned_cols=27  Identities=15%  Similarity=0.018  Sum_probs=19.9

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKG   83 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~   83 (120)
                      ..+..+.......+|+|||+.|+..+.
T Consensus       283 ~~Lt~~~~~~~~~~~spDG~~i~f~s~  309 (435)
T PRK05137        283 TRLTDSPAIDTSPSYSPDGSQIVFESD  309 (435)
T ss_pred             EEccCCCCccCceeEcCCCCEEEEEEC
Confidence            345556666778999999998776663

>KOG1645|consensus

Probab=86.22  E-value=0.74  Score=36.89  Aligned_cols=32  Identities=16%  Similarity=0.053  Sum_probs=23.4

Q ss_pred             eccccccCeEEEEEcCCCC-EEEEEeCCCCEEe
Q psy75            58 VLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDH   89 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki   89 (120)
                      .+.+|...|..++|||..+ ++..+|-+++|+|
T Consensus       188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki  220 (463)
T KOG1645|consen  188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKI  220 (463)
T ss_pred             cccccchhhhhhccCccccceeeeeccCceEEE
Confidence            4446777777888888776 6777777777777

>KOG4190|consensus

Probab=84.61  E-value=0.3  Score=40.86  Aligned_cols=35  Identities=9%  Similarity=-0.048  Sum_probs=30.8

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..+.||+..|..++--.+.+-++|+|.|+|+|+|-
T Consensus       729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWS  763 (1034)
T KOG4190|consen  729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWS  763 (1034)
T ss_pred             ecccCcHHHhHHHHhcccccceeeccCCceEEEEE
Confidence            68889999999988777778899999999999863

>PRK04922 tolB translocation protein TolB; Provisional

Probab=84.37  E-value=15  Score=29.06  Aligned_cols=26  Identities=15%  Similarity=-0.075  Sum_probs=18.8

Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeC
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKG   83 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~   83 (120)
                      .+..|.......+|+|||+.|+.++.
T Consensus       286 ~lt~~~~~~~~~~~spDG~~l~f~sd  311 (433)
T PRK04922        286 RLTNHFGIDTEPTWAPDGKSIYFTSD  311 (433)
T ss_pred             ECccCCCCccceEECCCCCEEEEEEC
Confidence            34455555678899999998877664

>KOG2139|consensus

Probab=83.99  E-value=1.4  Score=34.93  Aligned_cols=32  Identities=13%  Similarity=0.024  Sum_probs=26.6

Q ss_pred             cccccCeEEEEEcCCCCEEEEEeC-CCCEEecCC
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKG-LCLLDHGPN   92 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~-D~~iki~~~   92 (120)
                      .|| ..|++.+|++||..++++|. |..|.||+-
T Consensus       193 pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdp  225 (445)
T KOG2139|consen  193 PGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDP  225 (445)
T ss_pred             CCC-ceeeEEEEcCCCCEEeecccCcceEEEEcC
Confidence            355 78999999999999999996 678996654

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=83.75  E-value=1.1  Score=35.15  Aligned_cols=44  Identities=14%  Similarity=0.012  Sum_probs=34.8

Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhh
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKR  113 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~  113 (120)
                      +-.+.|..+.|+|+|++|+|-+. -+++        +||.+....|+.++--|
T Consensus       278 eivsSISD~kFs~ngryIlsRdy-ltvk--------iwDvnm~k~pikTi~~h  321 (460)
T COG5170         278 EIVSSISDFKFSDNGRYILSRDY-LTVK--------IWDVNMAKNPIKTIPMH  321 (460)
T ss_pred             HHhhhhcceEEcCCCcEEEEecc-ceEE--------EEecccccCCceeechH
Confidence            34567888999999999987764 4899        78888888888877444

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=81.99  E-value=6.2  Score=30.97  Aligned_cols=26  Identities=4%  Similarity=-0.141  Sum_probs=17.4

Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCCEEec
Q psy75            65 GVNWACFHPTLPLIVSGK-GLCLLDHG   90 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs-~D~~iki~   90 (120)
                      .-..+++||||++++.++ .++.+.++
T Consensus        79 ~~~~i~~s~DG~~~~v~n~~~~~v~v~  105 (369)
T PF02239_consen   79 NPRGIAVSPDGKYVYVANYEPGTVSVI  105 (369)
T ss_dssp             EEEEEEE--TTTEEEEEEEETTEEEEE
T ss_pred             CcceEEEcCCCCEEEEEecCCCceeEe
Confidence            357799999999766554 67888843

...

>PRK03629 tolB translocation protein TolB; Provisional

Probab=81.94  E-value=21  Score=28.40  Aligned_cols=26  Identities=4%  Similarity=-0.018  Sum_probs=19.2

Q ss_pred             ccccccCeEEEEEcCCCCEEEEEeCC
Q psy75            59 LEGHDRGVNWACFHPTLPLIVSGKGL   84 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~~~~laSgs~D   84 (120)
                      +..+...+...+|+|||+.|+..+.+
T Consensus       282 lt~~~~~~~~~~wSPDG~~I~f~s~~  307 (429)
T PRK03629        282 VTDGRSNNTEPTWFPDSQNLAYTSDQ  307 (429)
T ss_pred             ccCCCCCcCceEECCCCCEEEEEeCC
Confidence            33445567899999999988777653

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=80.20  E-value=6.1  Score=20.13  Aligned_cols=29  Identities=10%  Similarity=-0.054  Sum_probs=17.4

Q ss_pred             ccccCeEEEEEcCCCCEEEEEe-CC--CCEEe
Q psy75            61 GHDRGVNWACFHPTLPLIVSGK-GL--CLLDH   89 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs-~D--~~iki   89 (120)
                      .....-...+|||||+.|+=++ .+  +...|
T Consensus         6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~di   37 (39)
T PF07676_consen    6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDI   37 (39)
T ss_dssp             -SSSSEEEEEE-TTSSEEEEEEECT--SSEEE
T ss_pred             cCCccccCEEEecCCCEEEEEecCCCCCCcCE
Confidence            3455677899999998655444 34  44443

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	120
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.47
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.46
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.4
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.39
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.38
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.37
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.36
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.35
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.35
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.34
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.34
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.32
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.31
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.31
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.3
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.3
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.29
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.28
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.28
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.28
2pm7_B	297	Protein transport protein SEC13, protein transport	99.27
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.27
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.27
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.27
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.26
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.26
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.26
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.25
2pm7_B	297	Protein transport protein SEC13, protein transport	99.25
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.23
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.22
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.22
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.22
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.21
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.2
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.19
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.19
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.18
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.18
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.18
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.17
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.17
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.17
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.16
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.16
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.15
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.14
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.14
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.14
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.13
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.12
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.1
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.1
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.1
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.09
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.08
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.08
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.08
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.07
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.07
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.06
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.04
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.03
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.02
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.01
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	98.98
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	98.98
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	98.98
3jrp_A	379	Fusion protein of protein transport protein SEC13	98.96
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	98.96
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	98.95
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	98.95
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	98.95
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	98.94
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	98.94
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	98.93
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	98.93
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	98.92
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	98.92
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	98.92
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	98.91
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	98.91
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	98.91
3jrp_A	379	Fusion protein of protein transport protein SEC13	98.9
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	98.9
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	98.9
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	98.89
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	98.89
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	98.89
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	98.89
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	98.88
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	98.88
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	98.88
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	98.87
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	98.87
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	98.85
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	98.85
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	98.84
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	98.83
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	98.83
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	98.83
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	98.82
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	98.82
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	98.81
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	98.81
3jro_A	753	Fusion protein of protein transport protein SEC13	98.81
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	98.81
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	98.78
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	98.77
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	98.76
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	98.76
3jro_A	753	Fusion protein of protein transport protein SEC13	98.74
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	98.74
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	98.73
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	98.72
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	98.7
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	98.68
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	98.67
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	98.59
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	98.58
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	98.58
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	98.54
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	98.14
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	98.04
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	97.84
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	97.7
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	97.7
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	97.7
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	97.59
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	97.56
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	97.19
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	97.02
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	96.96
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	96.94
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	96.88
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	96.81
1k32_A	1045	Tricorn protease; protein degradation, substrate g	96.79
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	96.62
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	96.6
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	96.59
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	96.52
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	96.33
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	96.19
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	96.14
1k32_A	1045	Tricorn protease; protein degradation, substrate g	96.1
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	96.08
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	95.97
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	95.96
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	95.86
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	95.7
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	95.52
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	95.39
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	95.26
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	95.18
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	95.03
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	94.98
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	94.87
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	94.86
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	94.36
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	93.57
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	93.55
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	93.48
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	93.34
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	93.29
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	92.91
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	92.87
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	92.78
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	92.57
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	92.26
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	92.24
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	92.07
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	91.95
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	90.06
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	89.66
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	89.33
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	88.28
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	87.47
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	87.38
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	85.23
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	83.82
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	83.2
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	83.15
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	82.59
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	82.04
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	82.03
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	82.0
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	81.58
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	80.51

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.47  E-value=2.5e-13  Score=99.58  Aligned_cols=81  Identities=15%  Similarity=0.106  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|+||+.|++  +||+.++....      .+..|...+.++        .++++.|++++          ..+.+|..
T Consensus        25 ~~~l~s~~~dg~v~lWd~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~   98 (304)
T 2ynn_A           25 EPWVLTTLYSGRVELWNYETQVEVR------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD   98 (304)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred             CCEEEEEcCCCcEEEEECCCCceeE------EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCC
Confidence            578999999999  99998754432      345555555443        34455676665          67789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|++++|+|++++|+||+.|++|++|+
T Consensus        99 ~v~~~~~~~~~~~l~sgs~D~~v~lWd  125 (304)
T 2ynn_A           99 YIRSIAVHPTKPYVLSGSDDLTVKLWN  125 (304)
T ss_dssp             CEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred             cEEEEEEcCCCCEEEEECCCCeEEEEE
Confidence            999999999999999999999999553

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.46  E-value=5.7e-13  Score=98.86  Aligned_cols=98  Identities=19%  Similarity=0.100  Sum_probs=74.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++||+|+.|++  +||+.+++...      .+.+|...+.++.        ++++.|++++          .++.+|..
T Consensus       176 g~~lasg~~dg~i~iwd~~~~~~~~------~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~  249 (321)
T 3ow8_A          176 GKYLASGAIDGIINIFDIATGKLLH------TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS  249 (321)
T ss_dssp             SSEEEEEETTSCEEEEETTTTEEEE------EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS
T ss_pred             CCEEEEEcCCCeEEEEECCCCcEEE------EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC
Confidence            578999999999  99998765432      3556666666543        4456677665          67789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      .|.+++|+|+++.|+||+.|++|+        +||.+. ..++..+.+|.+.+
T Consensus       250 ~v~~~~~sp~~~~l~s~s~D~~v~--------iwd~~~-~~~~~~~~~h~~~v  293 (321)
T 3ow8_A          250 WVLNVAFCPDDTHFVSSSSDKSVK--------VWDVGT-RTCVHTFFDHQDQV  293 (321)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEE--------EEETTT-TEEEEEECCCSSCE
T ss_pred             ceEEEEECCCCCEEEEEeCCCcEE--------EEeCCC-CEEEEEEcCCCCcE
Confidence            999999999999999999999999        666554 45566676665543

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.40  E-value=8.9e-13  Score=100.63  Aligned_cols=81  Identities=20%  Similarity=0.179  Sum_probs=64.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|+|||.|++  +||+.++...      .++.+|...|.++.        ++++.|++++          .++.+|..
T Consensus       120 ~~~l~s~s~Dg~i~vwd~~~~~~~------~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~  193 (410)
T 1vyh_C          120 FSVMVSASEDATIKVWDYETGDFE------RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDH  193 (410)
T ss_dssp             SSEEEEEESSSCEEEEETTTCCCC------EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSS
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEE------EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCC
Confidence            579999999999  9999865433      24667777666543        3455676664          67789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|++++|+|++..|+||+.|++|++|+
T Consensus       194 ~V~~v~~~p~~~~l~s~s~D~~i~~wd  220 (410)
T 1vyh_C          194 NVSSVSIMPNGDHIVSASRDKTIKMWE  220 (410)
T ss_dssp             CEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             CEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999999999999543

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.39  E-value=1.2e-12  Score=98.79  Aligned_cols=72  Identities=15%  Similarity=0.158  Sum_probs=46.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEe
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGK   82 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs   82 (120)
                      +++||+||.|++  |||+.+++.                             +...+.+|...|++|+|||||++|||||
T Consensus       281 g~~lasgs~D~~V~iwd~~~~~~-----------------------------~~~~~~gH~~~V~~v~fSpdg~~laS~S  331 (365)
T 4h5i_A          281 GELAVLASNDNSIALVKLKDLSM-----------------------------SKIFKQAHSFAITEVTISPDSTYVASVS  331 (365)
T ss_dssp             SCEEEEEETTSCEEEEETTTTEE-----------------------------EEEETTSSSSCEEEEEECTTSCEEEEEE
T ss_pred             CCceEEEcCCCEEEEEECCCCcE-----------------------------EEEecCcccCCEEEEEECCCCCEEEEEe
Confidence            467888888887  888754321                             1123578999999999999999999999


Q ss_pred             CCCCEEecCCCCceEeeCC-------CCccchhhhhhh
Q psy75            83 GLCLLDHGPNLFPVVLDSS-------DFFVPIAKLEKR  113 (120)
Q Consensus        83 ~D~~iki~~~~~~~~~~~~-------~~~~~~~~~~~~  113 (120)
                      .|++||        +||++       .+...+..||.|
T Consensus       332 ~D~tvr--------vw~ip~~~~~~~s~~~~l~kl~~~  361 (365)
T 4h5i_A          332 AANTIH--------IIKLPLNYANYTSMKQKISKLEHH  361 (365)
T ss_dssp             TTSEEE--------EEECCTTTTC--------------
T ss_pred             CCCeEE--------EEEcCCCCcCccCccccceeeecc
Confidence            999999        55554       344566666655

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.38  E-value=1.2e-12  Score=96.60  Aligned_cols=86  Identities=17%  Similarity=0.142  Sum_probs=64.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|+|||.|++  +||+.........+ ...+.+|...+.++.        ++++.|++++          ..+.+|..
T Consensus        30 ~~~l~s~s~D~~v~~W~~~~~~~~~~~~-~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~  108 (319)
T 3frx_A           30 PNLLLSASRDKTLISWKLTGDDQKFGVP-VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKS  108 (319)
T ss_dssp             TTEEEEEETTSEEEEEEEEEETTEEEEE-EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred             ccEEEEecCCccEEEecCCCCCcccccc-ceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC
Confidence            379999999999  99986421111000 135778887776543        4566777775          67789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|.+++|+|++.+|+||+.|++|++|+
T Consensus       109 ~v~~~~~~~~~~~l~s~s~D~~i~vwd  135 (319)
T 3frx_A          109 DVMSVDIDKKASMIISGSRDKTIKVWT  135 (319)
T ss_dssp             CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999999999999664

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.37  E-value=2.4e-12  Score=95.63  Aligned_cols=87  Identities=15%  Similarity=0.078  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccC-CcceEeeccCCCceEE--------EeccCCCeeE----------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAP-GMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~-~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~   63 (120)
                      +++|+|||.|++  +||+.......... ....+.+|...|.++.        ++++.|++++          ..+.+|.
T Consensus        39 ~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~  118 (343)
T 2xzm_R           39 SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ  118 (343)
T ss_dssp             CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC
T ss_pred             CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence            468999999999  99986432110000 0124667777776543        4566777775          5778999


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..|++++|+|+++.|+||+.|++|++|+
T Consensus       119 ~~v~~v~~sp~~~~l~s~~~d~~i~~wd  146 (343)
T 2xzm_R          119 SEVYSVAFSPDNRQILSAGAEREIKLWN  146 (343)
T ss_dssp             SCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred             CcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence            9999999999999999999999999875

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.36  E-value=5.2e-12  Score=92.48  Aligned_cols=81  Identities=22%  Similarity=0.181  Sum_probs=64.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE-----------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK-----------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~-----------~~l~gH~   63 (120)
                      +++|++|+.|++  +||+.++....      .+.+|...+.++.        ++++.|++++           ..+.+|.
T Consensus        67 ~~~l~s~s~d~~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~  140 (304)
T 2ynn_A           67 KNWIIVGSDDFRIRVFNYNTGEKVV------DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE  140 (304)
T ss_dssp             GTEEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC
T ss_pred             CCEEEEECCCCEEEEEECCCCcEEE------EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC
Confidence            478999999999  99998765442      4667777666543        4566777765           5678999


Q ss_pred             cCeEEEEEcC-CCCEEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHP-TLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp-~~~~laSgs~D~~iki~~   91 (120)
                      ..|++++|+| ++..|+||+.|++|++|+
T Consensus       141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd  169 (304)
T 2ynn_A          141 HFVMCVAFNPKDPSTFASGCLDRTVKVWS  169 (304)
T ss_dssp             SCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred             CcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence            9999999999 568999999999999765

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.35  E-value=7.4e-12  Score=92.82  Aligned_cols=82  Identities=16%  Similarity=0.029  Sum_probs=63.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|++|+.|++  +||+.......      .+.+|...+.++.        ++++.|++++          .++.+|..
T Consensus       218 ~~~l~s~s~dg~i~iwd~~~~~~~~------~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~  291 (321)
T 3ow8_A          218 SQLLVTASDDGYIKIYDVQHANLAG------TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD  291 (321)
T ss_dssp             SCEEEEECTTSCEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred             CCEEEEEcCCCeEEEEECCCcceeE------EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC
Confidence            468999999999  99997654432      3556666555543        3455676665          67789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .|++++|+|+++.|+|++.|++|++|+-
T Consensus       292 ~v~~v~~s~~g~~l~s~~~d~~i~vwd~  319 (321)
T 3ow8_A          292 QVWGVKYNGNGSKIVSVGDDQEIHIYDC  319 (321)
T ss_dssp             CEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred             cEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            9999999999999999999999996653

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.35  E-value=4.1e-12  Score=96.93  Aligned_cols=98  Identities=27%  Similarity=0.170  Sum_probs=69.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce----------------------------EEEeccCCCe
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS----------------------------TDLFGQADAV   54 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~----------------------------~~~~~~~D~~   54 (120)
                      +++|+||+.|++  +||+.+.....      .+.+|...+.+                            ..++++.|++
T Consensus       246 g~~l~s~s~D~~v~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~  319 (410)
T 1vyh_C          246 GTLIASCSNDQTVRVWVVATKECKA------ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT  319 (410)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCEEE------EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceee------EecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence            578999999999  99997654432      22233332222                            2344556666


Q ss_pred             eE----------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            55 VK----------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        55 v~----------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      ++          .++.+|...|++++|+|++++|+||+.|++|+        +||.+. ..++..+.+|.+.+
T Consensus       320 i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~--------vwd~~~-~~~~~~~~~h~~~v  383 (410)
T 1vyh_C          320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR--------VWDYKN-KRCMKTLNAHEHFV  383 (410)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEE--------EECCTT-SCCCEEEECCSSCE
T ss_pred             EEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEE--------EEECCC-CceEEEEcCCCCcE
Confidence            54          67789999999999999999999999999999        555444 44566666665543

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.34  E-value=3.6e-12  Score=94.46  Aligned_cols=104  Identities=18%  Similarity=0.128  Sum_probs=65.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCcee-eccCCcceEeeccCCCceEEE--------eccCCCeeE--------------Eec
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKK-NVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK--------------HVL   59 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~-~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~--------------~~l   59 (120)
                      +++|++|+.|++  +||+...... ........+.+|...|.++.+        +++.|++++              ..+
T Consensus        70 ~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~  149 (330)
T 2hes_X           70 TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL  149 (330)
T ss_dssp             SSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE
T ss_pred             CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe
Confidence            578999999999  9998532110 000001246677777766443        445566554              356


Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCC-Cccchhhhhhhhhh
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSD-FFVPIAKLEKREGR  116 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~-~~~~~~~~~~~~~~  116 (120)
                      .+|...|++++|+|++.+|+||+.|++|++|+        .+. -..++..|.+|.+.
T Consensus       150 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~--------~~~~~~~~~~~~~~h~~~  199 (330)
T 2hes_X          150 QEHSQDVKHVIWHPSEALLASSSYDDTVRIWK--------DYDDDWECVAVLNGHEGT  199 (330)
T ss_dssp             CCCSSCEEEEEECSSSSEEEEEETTSCEEEEE--------EETTEEEEEEEECCCSSC
T ss_pred             ccCCCceEEEEECCCCCEEEEEcCCCeEEEEE--------CCCCCeeEEEEccCCCCc
Confidence            78999999999999999999999999999664        221 12455566666543

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.34  E-value=1.1e-11  Score=93.23  Aligned_cols=80  Identities=10%  Similarity=-0.067  Sum_probs=61.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE---------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK---------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~---------~~l~gH~~   64 (120)
                      .++|++|+.|++  +||+.+++..      ..+.+|...|+++.+         +++.|++++         ..+.+|..
T Consensus       227 ~~~l~sg~~dg~v~~wd~~~~~~~------~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~  300 (344)
T 4gqb_B          227 SEVFVFGDENGTVSLVDTKSTSCV------LSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRD  300 (344)
T ss_dssp             TTEEEEEETTSEEEEEESCC--CC------EEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSS
T ss_pred             CcceEEeccCCcEEEEECCCCcEE------EEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCC
Confidence            358999999999  9999765443      246677777666443         455677775         45679999


Q ss_pred             CeEEEEEcCCCC-EEEEEeCCCCEEec
Q psy75            65 GVNWACFHPTLP-LIVSGKGLCLLDHG   90 (120)
Q Consensus        65 ~V~~v~fsp~~~-~laSgs~D~~iki~   90 (120)
                      .|++++|||+++ +|+|||.|++|++|
T Consensus       301 ~V~~v~~sp~~~~llas~s~D~~v~~w  327 (344)
T 4gqb_B          301 FVRDATWSPLNHSLLTTVGWDHQVVHH  327 (344)
T ss_dssp             CEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred             CEEEEEEeCCCCeEEEEEcCCCeEEEE
Confidence            999999999986 68899999999955

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.32  E-value=1.9e-11  Score=91.62  Aligned_cols=81  Identities=16%  Similarity=0.070  Sum_probs=62.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce----------EEEeccCCCeeE----------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS----------TDLFGQADAVVK----------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~----------~~~~~~~D~~v~----------~~l~gH   62 (120)
                      .+.|+|||.|++  +||+.++....      .+.+|...+.+          ..++++.|++++          ..+.+|
T Consensus       166 ~~~l~t~s~D~~v~lwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h  239 (354)
T 2pbi_B          166 DMQILTASGDGTCALWDVESGQLLQ------SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETH  239 (354)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEE------EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence            358999999999  99998765432      35555554433          334555666664          677899


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ...|++++|+|++..|+||+.|++|++|+
T Consensus       240 ~~~v~~v~~~p~~~~l~s~s~D~~v~lwd  268 (354)
T 2pbi_B          240 ESDVNSVRYYPSGDAFASGSDDATCRLYD  268 (354)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CCCeEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            99999999999999999999999999664

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.31  E-value=8.8e-12  Score=92.88  Aligned_cols=83  Identities=20%  Similarity=0.115  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE-------------Eeccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK-------------HVLEG   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~-------------~~l~g   61 (120)
                      +++|+|||.|++  +||+.......    ...+.+|...|.++.        ++++.|++++             ..+.+
T Consensus        73 g~~l~s~s~D~~v~iw~~~~~~~~~----~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~  148 (345)
T 3fm0_A           73 GNYLASASFDATTCIWKKNQDDFEC----VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS  148 (345)
T ss_dssp             SSEEEEEETTSCEEEEEECCC-EEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC
T ss_pred             CCEEEEEECCCcEEEEEccCCCeEE----EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC
Confidence            579999999999  99987543211    124667777666644        3455676664             45678


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |...|.+++|+|++++|++|+.|++|++|+
T Consensus       149 h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~  178 (345)
T 3fm0_A          149 HTQDVKHVVWHPSQELLASASYDDTVKLYR  178 (345)
T ss_dssp             CCSCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred             cCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            999999999999999999999999999654

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.31  E-value=7.8e-12  Score=92.62  Aligned_cols=85  Identities=14%  Similarity=0.049  Sum_probs=56.0

Q ss_pred             CCCCEEEEEcCCCc--eEecCCCceeeccCCcceE-ee-ccCCCceEE--------EeccCCCeeE--------------
Q psy75             3 AIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGL-EE-HLRNPSSTD--------LFGQADAVVK--------------   56 (120)
Q Consensus         3 ~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l-~~-h~~~v~~~~--------~~~~~D~~v~--------------   56 (120)
                      +-+++||||+.|++  +||+........    ..+ .+ |...|.++.        ++++.|++++              
T Consensus        22 ~s~~~las~~~D~~i~lw~~~~~~~~~~----~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~   97 (330)
T 2hes_X           22 FSQGILATGSTDRKIKLVSVKYDDFTLI----DVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEM   97 (330)
T ss_dssp             EETTEEEEEESSSCEEEEECSSSCCEEE----EEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCC
T ss_pred             cCCCEEEEEcCCCEEEEEEecCCCeEEE----EEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccc
Confidence            34568999999999  999975321100    112 12 555555433        3445566554              


Q ss_pred             ---EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 ---HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ---~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                         ..+.+|...|++++|+|++++||||+.|++|++|+
T Consensus        98 ~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd  135 (330)
T 2hes_X           98 DLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE  135 (330)
T ss_dssp             EEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             eeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence               35679999999999999999999999999999553

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.30  E-value=1.3e-11  Score=91.90  Aligned_cols=84  Identities=18%  Similarity=0.116  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE------------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK------------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~------------~~l~gH   62 (120)
                      +++|+|||.|++  +||+........   ...+.+|...+.++.        ++++.|++++            .++.+|
T Consensus       117 ~~~l~s~s~D~~v~iwd~~~~~~~~~---~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h  193 (345)
T 3fm0_A          117 GNLLATCSRDKSVWVWEVDEEDEYEC---VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH  193 (345)
T ss_dssp             SSEEEEEETTSCEEEEEECTTSCEEE---EEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred             CCEEEEEECCCeEEEEECCCCCCeEE---EEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC
Confidence            579999999999  999975322110   023455665555543        3455666654            467899


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ...|++++|+|++++|+||+.|++|++|+
T Consensus       194 ~~~v~~l~~sp~g~~l~s~s~D~~v~iW~  222 (345)
T 3fm0_A          194 ESTVWSLAFDPSGQRLASCSDDRTVRIWR  222 (345)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence            99999999999999999999999999986

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.30  E-value=1e-11  Score=91.47  Aligned_cols=84  Identities=17%  Similarity=0.106  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE----------eccCCCeeE------------Eec
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL----------FGQADAVVK------------HVL   59 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~----------~~~~D~~v~------------~~l   59 (120)
                      -+++|||||.|++  +||+.++.....    ..+.+|...|.++.+          +++.|++++            ..+
T Consensus        24 ~g~~lasgs~D~~v~lwd~~~~~~~~~----~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~   99 (316)
T 3bg1_A           24 YGTRLATCSSDRSVKIFDVRNGGQILI----ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEH   99 (316)
T ss_dssp             GGCEEEEEETTTEEEEEEEETTEEEEE----EEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEEecCCCcEEE----EEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEc
Confidence            3689999999999  999976432111    246677776665544          344676665            356


Q ss_pred             cccccCeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75            60 EGHDRGVNWACFHPT--LPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~   91 (120)
                      .+|...|++++|+|+  +.+|++|+.|++|++|+
T Consensus       100 ~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd  133 (316)
T 3bg1_A          100 AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLT  133 (316)
T ss_dssp             CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEE
T ss_pred             cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEe
Confidence            689999999999998  77999999999999654

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.29  E-value=8.3e-12  Score=95.91  Aligned_cols=44  Identities=7%  Similarity=-0.111  Sum_probs=34.3

Q ss_pred             eccCCCeeE----------EeccccccCeE-EEEEcCCCCEEEEEeCCCCEEecC
Q psy75            48 FGQADAVVK----------HVLEGHDRGVN-WACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        48 ~~~~D~~v~----------~~l~gH~~~V~-~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +++.|++++          .++.+|...+. +++|||||++|+|||.|++||||+
T Consensus       300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd  354 (356)
T 2w18_A          300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH  354 (356)
T ss_dssp             EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred             EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence            344577765          68889988766 589999999999999999999663

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.28  E-value=2.4e-11  Score=94.72  Aligned_cols=80  Identities=19%  Similarity=0.113  Sum_probs=63.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE---------EeccccccC
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK---------HVLEGHDRG   65 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~---------~~l~gH~~~   65 (120)
                      +++||+++.|++  +||.++. ..      ..+.+|...++++.+        +++.|+.++         .++.+|...
T Consensus       479 ~~~las~~~d~~i~iw~~~~~-~~------~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~  551 (577)
T 2ymu_A          479 GQTIASASDDKTVKLWNRNGQ-LL------QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS  551 (577)
T ss_dssp             SCEEEEEETTSEEEEEETTSC-EE------EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSC
T ss_pred             CCEEEEEeCCCEEEEEcCCCC-EE------EEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCC
Confidence            578999999999  9997542 22      246677777766543        344566654         678899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |++++|+||+++|+|++.|++|++|+
T Consensus       552 v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          552 VWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             EEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            99999999999999999999999774

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.28  E-value=1.7e-11  Score=92.44  Aligned_cols=85  Identities=14%  Similarity=0.092  Sum_probs=61.2

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCCeeE-----------Eeccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAVVK-----------HVLEGHD   63 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v~-----------~~l~gH~   63 (120)
                      ..|+|||.|++  +||+.++......... ...+|...+.+         +.++++.|++++           ..+.+|.
T Consensus       171 ~~l~s~s~D~~i~~wd~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~  249 (380)
T 3iz6_a          171 TRLITGSGDQTCVLWDVTTGQRISIFGSE-FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE  249 (380)
T ss_dssp             SCEEEECTTSCEEEECTTTCCEEEEECCC-SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS
T ss_pred             CEEEEECCCCcEEEEEcCCCcEEEEeecc-cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC
Confidence            47999999999  9999876543221100 01234433332         345566777765           5677999


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..|++++|+|+++.|+|||.|++|++|+
T Consensus       250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd  277 (380)
T 3iz6_a          250 GDINSVKFFPDGQRFGTGSDDGTCRLFD  277 (380)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred             CCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence            9999999999999999999999999654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.28  E-value=3.3e-11  Score=87.63  Aligned_cols=81  Identities=22%  Similarity=0.117  Sum_probs=61.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|++|+.|++  +||+..++...      .+.+|...+.++        .++++.|+.++          ..+.+|..
T Consensus        35 ~~~l~s~~~dg~i~iw~~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~  108 (312)
T 4ery_A           35 GEWLASSSADKLIKIWGAYDGKFEK------TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSN  108 (312)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred             CCEEEEeeCCCeEEEEeCCCcccch------hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCC
Confidence            578999999999  99997654432      344565555543        33455566654          67789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|.+++|+|++++|++|+.|++|++|+
T Consensus       109 ~v~~~~~~~~~~~l~s~~~d~~i~iwd  135 (312)
T 4ery_A          109 YVFCCNFNPQSNLIVSGSFDESVRIWD  135 (312)
T ss_dssp             CEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred             CEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence            999999999999999999999999543

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.27  E-value=2.7e-11  Score=88.41  Aligned_cols=84  Identities=15%  Similarity=0.042  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE------------Eec
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK------------HVL   59 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~------------~~l   59 (120)
                      -+++|||||.|++  +||+.+....    ...++.+|...|.++.          ++++.|++++            ..+
T Consensus        20 ~g~~las~s~D~~v~iw~~~~~~~~----~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~   95 (297)
T 2pm7_B           20 YGKRMATCSSDKTIKIFEVEGETHK----LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVH   95 (297)
T ss_dssp             TSSEEEEEETTSCEEEEEBCSSCBC----CCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEE
T ss_pred             CCCEEEEEeCCCEEEEEecCCCCcE----EEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEe
Confidence            3789999999999  9998642111    0135667776665543          3455677776            345


Q ss_pred             cccccCeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75            60 EGHDRGVNWACFHPT--LPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~   91 (120)
                      .+|...|++++|+|+  +.+|++|+.|++|++|+
T Consensus        96 ~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd  129 (297)
T 2pm7_B           96 AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVE  129 (297)
T ss_dssp             CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred             ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEE
Confidence            679999999999998  78999999999999654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.27  E-value=3.5e-11  Score=90.35  Aligned_cols=80  Identities=10%  Similarity=-0.100  Sum_probs=59.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE---------EeccCCCeeE---------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVVK---------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~---------~~l~gH~~   64 (120)
                      .++|++|+.|++  +||+.+++...      .+.+|...++++.         ++++.|++++         ....+|..
T Consensus       239 ~~~la~g~~d~~i~~wd~~~~~~~~------~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~  312 (357)
T 4g56_B          239 DDTFACGDETGNVSLVNIKNPDSAQ------TSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRD  312 (357)
T ss_dssp             TTEEEEEESSSCEEEEESSCGGGCE------EECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSS
T ss_pred             cceEEEeecccceeEEECCCCcEeE------EEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCC
Confidence            468999999998  99997654332      3445555555433         3455677765         23348999


Q ss_pred             CeEEEEEcC-CCCEEEEEeCCCCEEec
Q psy75            65 GVNWACFHP-TLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        65 ~V~~v~fsp-~~~~laSgs~D~~iki~   90 (120)
                      .|++|+||| ++.+|||||.|++|++|
T Consensus       313 ~V~~vafsP~d~~~l~s~s~Dg~v~iW  339 (357)
T 4g56_B          313 FVTGVAWSPLDHSKFTTVGWDHKVLHH  339 (357)
T ss_dssp             CEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred             CEEEEEEeCCCCCEEEEEcCCCeEEEE
Confidence            999999999 78899999999999933

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.27  E-value=2.8e-11  Score=91.03  Aligned_cols=84  Identities=15%  Similarity=0.018  Sum_probs=62.7

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~gH~~~   65 (120)
                      +.|++|+.|++  +||+.+++......  ..+.+|...|.++.+        +++.|++++          .++.+|...
T Consensus        94 ~~l~~~s~dg~v~lWd~~~~~~~~~~~--~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~  171 (344)
T 4gqb_B           94 RGILVASDSGAVELWELDENETLIVSK--FCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQ  171 (344)
T ss_dssp             TEEEEEETTSEEEEEEECTTSSCEEEE--EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred             CeEEEEECCCEEEEEeccCCCceeEee--ccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCc
Confidence            57899999999  99997654322110  134467777766543        455676665          788899999


Q ss_pred             eEEEEEcCCCC-EEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLP-LIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~-~laSgs~D~~iki~~   91 (120)
                      |++++|+|++. +|+||+.|++|++|+
T Consensus       172 V~~~~~~~~~~~~l~s~s~D~~v~iwd  198 (344)
T 4gqb_B          172 VTCVAASPHKDSVFLSCSEDNRILLWD  198 (344)
T ss_dssp             EEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred             eEEEEecCCCCCceeeecccccccccc
Confidence            99999999985 789999999999653

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.27  E-value=3e-11  Score=89.64  Aligned_cols=98  Identities=16%  Similarity=0.122  Sum_probs=69.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eec--ccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVL--EGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l--~gH   62 (120)
                      +++|+||+.|++  +||+..+....      .+.+|...++++.        ++++.|++++          ..+  ..+
T Consensus       196 ~~~l~sg~~d~~v~~wd~~~~~~~~------~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~  269 (340)
T 1got_B          196 TRLFVSGACDASAKLWDVREGMCRQ------TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI  269 (340)
T ss_dssp             SSEEEEEETTSCEEEEETTTCSEEE------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC
T ss_pred             CCEEEEEeCCCcEEEEECCCCeeEE------EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCc
Confidence            468999999999  99997654432      4556666665543        3456677775          222  234


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      ...|.+++|+|++++|++|+.|++|+        +||... ..++..|.+|.+.+
T Consensus       270 ~~~v~~~~~s~~g~~l~~g~~d~~i~--------vwd~~~-~~~~~~~~~h~~~v  315 (340)
T 1got_B          270 ICGITSVSFSKSGRLLLAGYDDFNCN--------VWDALK-ADRAGVLAGHDNRV  315 (340)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTSEEE--------EEETTT-CCEEEEEECCSSCE
T ss_pred             ccceEEEEECCCCCEEEEECCCCeEE--------EEEccc-CcEeeEeecCCCcE
Confidence            45899999999999999999999999        556544 34566677776544

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.26  E-value=5.5e-11  Score=88.26  Aligned_cols=80  Identities=19%  Similarity=0.224  Sum_probs=62.5

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------EeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~~   65 (120)
                      +.|++++.|++  +||+.++....      .+.+|...+.++        .++++.|++++          .++.+|...
T Consensus       155 ~~l~s~s~d~~i~~wd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~  228 (340)
T 1got_B          155 NQIVTSSGDTTCALWDIETGQQTT------TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD  228 (340)
T ss_dssp             TEEEEEETTSCEEEEETTTTEEEE------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC
T ss_pred             CcEEEEECCCcEEEEECCCCcEEE------EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCC
Confidence            46899999999  99998755432      355666655543        34455676665          678899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |++++|+|++..|++|+.|++|++|+
T Consensus       229 v~~v~~~p~~~~l~s~s~d~~v~iwd  254 (340)
T 1got_B          229 INAICFFPNGNAFATGSDDATCRLFD  254 (340)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence            99999999999999999999999664

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.26  E-value=4.3e-11  Score=91.02  Aligned_cols=54  Identities=17%  Similarity=0.158  Sum_probs=37.7

Q ss_pred             CeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            53 AVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        53 ~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      +....++.||...|++++|||+|++|||||.|++|+        +||..+ ..|....|+++.
T Consensus       354 ~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr--------iWdv~~-~~~~~~~~~~~~  407 (420)
T 4gga_A          354 MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR--------LWRCFE-LDPARRREREKA  407 (420)
T ss_dssp             CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEE--------EECCSC-SSCC--------
T ss_pred             CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE--------EEECCC-CCccchhhhccC
Confidence            333478899999999999999999999999999999        555544 345555555443

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.26  E-value=1.9e-11  Score=88.78  Aligned_cols=80  Identities=9%  Similarity=-0.086  Sum_probs=53.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE-------EEeccCCCeeE-------------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST-------DLFGQADAVVK-------------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~-------~~~~~~D~~v~-------------------   56 (120)
                      +++|++|+.|++  +||+.........      . +...+.++       .+.++.|+.++                   
T Consensus       227 ~~~l~s~s~Dg~i~iwd~~~~~~~~~~------~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  299 (340)
T 4aow_A          227 GSLCASGGKDGQAMLWDLNEGKHLYTL------D-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVIS  299 (340)
T ss_dssp             SSEEEEEETTCEEEEEETTTTEEEEEE------E-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC---
T ss_pred             CCEEEEEeCCCeEEEEEeccCceeeee------c-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEecccccee
Confidence            578999999999  9999875443321      1 11112221       22233344433                   


Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ....+|...|++++|+|++++||||+.|++|+||+
T Consensus       300 ~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~  334 (340)
T 4aow_A          300 TSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ  334 (340)
T ss_dssp             ----CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence            23347999999999999999999999999999553

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.25  E-value=5.4e-11  Score=87.70  Aligned_cols=80  Identities=20%  Similarity=0.098  Sum_probs=62.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE---------EeccccccC
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK---------HVLEGHDRG   65 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~---------~~l~gH~~~   65 (120)
                      +++|+|||.|++  +||+.+++...      .+.+|...+.++        .++++.|++++         .++.+|...
T Consensus        77 g~~l~s~s~D~~v~~wd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~  150 (319)
T 3frx_A           77 GAYALSASWDKTLRLWDVATGETYQ------RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDW  150 (319)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSC
T ss_pred             CCEEEEEeCCCEEEEEECCCCCeeE------EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCc
Confidence            578999999999  99998765432      466777766654        34566787775         567799999


Q ss_pred             eEEEEEcCCC------CEEEEEeCCCCEEec
Q psy75            66 VNWACFHPTL------PLIVSGKGLCLLDHG   90 (120)
Q Consensus        66 V~~v~fsp~~------~~laSgs~D~~iki~   90 (120)
                      |.+++|+|.+      ..|++|+.|++|++|
T Consensus       151 v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~w  181 (319)
T 3frx_A          151 VSQVRVVPNEKADDDSVTIISAGNDKMVKAW  181 (319)
T ss_dssp             EEEEEECCC------CCEEEEEETTSCEEEE
T ss_pred             EEEEEEccCCCCCCCccEEEEEeCCCEEEEE
Confidence            9999999954      489999999999944

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.25  E-value=4e-11  Score=87.45  Aligned_cols=82  Identities=21%  Similarity=0.197  Sum_probs=58.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE------------Eecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK------------HVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~------------~~l~   60 (120)
                      +++|+|||.|++  +||+.++....    ...+..|...++++.          ++++.|++++            ..+.
T Consensus        67 g~~l~s~s~D~~v~iWd~~~~~~~~----~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~  142 (297)
T 2pm7_B           67 GTILASCSYDGKVMIWKEENGRWSQ----IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID  142 (297)
T ss_dssp             CSEEEEEETTTEEEEEEBSSSCBCC----CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE
T ss_pred             CCEEEEEcCCCEEEEEEcCCCceEE----EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee
Confidence            579999999999  99997643111    013445555554433          3445566654            3456


Q ss_pred             ccccCeEEEEEcCC-------------CCEEEEEeCCCCEEec
Q psy75            61 GHDRGVNWACFHPT-------------LPLIVSGKGLCLLDHG   90 (120)
Q Consensus        61 gH~~~V~~v~fsp~-------------~~~laSgs~D~~iki~   90 (120)
                      +|...|++++|+|+             +++||||+.|++|++|
T Consensus       143 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lw  185 (297)
T 2pm7_B          143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW  185 (297)
T ss_dssp             CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEE
T ss_pred             cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEE
Confidence            89999999999997             4689999999999955

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.23  E-value=3.5e-11  Score=97.06  Aligned_cols=87  Identities=17%  Similarity=0.083  Sum_probs=66.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~   64 (120)
                      .++|+|||.|++  +||+........ .....+.+|...|.++.        ++++.|++++          ..+.+|..
T Consensus       395 ~~~l~s~s~D~~i~~W~~~~~~~~~~-~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~  473 (694)
T 3dm0_A          395 ADIIVSASRDKSIILWKLTKDDKAYG-VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK  473 (694)
T ss_dssp             CSEEEEEETTSEEEEEECCCSTTCSC-EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred             CCEEEEEeCCCcEEEEEccCCCcccc-cccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCC
Confidence            368999999999  999865221100 00125677887776644        4556777775          57789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .|.+++|+|+++.|+|||.|++|++|+.
T Consensus       474 ~v~~~~~s~~~~~l~s~s~D~~i~iwd~  501 (694)
T 3dm0_A          474 DVLSVAFSLDNRQIVSASRDRTIKLWNT  501 (694)
T ss_dssp             CEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred             CEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence            9999999999999999999999999874

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.22  E-value=2e-11  Score=97.30  Aligned_cols=80  Identities=11%  Similarity=0.106  Sum_probs=59.5

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccC--CCceEEE--------eccCCCeeE----------Eeccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLR--NPSSTDL--------FGQADAVVK----------HVLEGHD   63 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~--~v~~~~~--------~~~~D~~v~----------~~l~gH~   63 (120)
                      ++|||||.|++  |||+.+++..      .++.+|..  .+.++.+        +++.|++++          .++.+|.
T Consensus       324 ~~laS~S~D~tvklWD~~~~~~~------~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~  397 (524)
T 2j04_B          324 TVVSTVAVDGYFYIFNPKDIATT------KTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE  397 (524)
T ss_dssp             CEEEEEETTSEEEEECGGGHHHH------CEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS
T ss_pred             eEEEEeccCCeEEEEECCCCCcc------cccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC
Confidence            68999999999  9999753322      13344432  2333333        334566655          5678999


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +.|++|+|||+++.|+|||.|++|++|+
T Consensus       398 ~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd  425 (524)
T 2j04_B          398 TTITAIGVSRLHPMVLAGSADGSLIITN  425 (524)
T ss_dssp             SCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred             CceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence            9999999999999999999999999985

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.22  E-value=8.7e-11  Score=87.96  Aligned_cols=98  Identities=17%  Similarity=0.092  Sum_probs=70.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecc--cc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLE--GH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~--gH   62 (120)
                      +++|+||+.|++  +||+.++....      .+..|...++++.        ++++.|++++          ..+.  .+
T Consensus       210 g~~l~sgs~Dg~v~~wd~~~~~~~~------~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~  283 (354)
T 2pbi_B          210 GNTFVSGGCDKKAMVWDMRSGQCVQ------AFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI  283 (354)
T ss_dssp             CCEEEEEETTSCEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEE------EecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc
Confidence            469999999999  99998755432      4556666666543        3456777776          1222  33


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      ...+.+++|+|++++|++|+.|++|+        +||.++ ..++..+.+|++.+
T Consensus       284 ~~~~~~~~~s~~g~~l~~g~~d~~i~--------vwd~~~-~~~~~~l~~h~~~v  329 (354)
T 2pbi_B          284 IFGASSVDFSLSGRLLFAGYNDYTIN--------VWDVLK-GSRVSILFGHENRV  329 (354)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTSCEE--------EEETTT-CSEEEEECCCSSCE
T ss_pred             ccceeEEEEeCCCCEEEEEECCCcEE--------EEECCC-CceEEEEECCCCcE
Confidence            45789999999999999999999999        566544 34566677776654

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.22  E-value=1e-10  Score=84.17  Aligned_cols=37  Identities=19%  Similarity=0.048  Sum_probs=33.3

Q ss_pred             eeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            54 VVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        54 ~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      ....++.+|.+.|++++|||++++|||||.|++|+||
T Consensus       275 ~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iW  311 (318)
T 4ggc_A          275 AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW  311 (318)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred             cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence            3347889999999999999999999999999999944

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.21  E-value=4.5e-11  Score=95.24  Aligned_cols=87  Identities=6%  Similarity=-0.155  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceee----ccCCc-ceEeeccCCCceE-------EEeccCCCeeE-----------Eec
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKN----VAPGM-GGLEEHLRNPSST-------DLFGQADAVVK-----------HVL   59 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~----~~~~~-~~l~~h~~~v~~~-------~~~~~~D~~v~-----------~~l   59 (120)
                      +++|||||.|++  +||+.......    ....+ ..+.+|...+.++       .++++.|++++           ..+
T Consensus       225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~  304 (524)
T 2j04_B          225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYD  304 (524)
T ss_dssp             SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEE
T ss_pred             CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEe
Confidence            369999999999  99997543210    00011 2455666655554       34567788876           357


Q ss_pred             cccccCeEEE--EEcCCC-CEEEEEeCCCCEEecC
Q psy75            60 EGHDRGVNWA--CFHPTL-PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        60 ~gH~~~V~~v--~fsp~~-~~laSgs~D~~iki~~   91 (120)
                      .+|...|++|  +|+|++ .+|||||.|++||||+
T Consensus       305 ~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD  339 (524)
T 2j04_B          305 QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN  339 (524)
T ss_dssp             ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred             ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence            7999999999  678888 8999999999999655

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.20  E-value=7.8e-11  Score=91.77  Aligned_cols=96  Identities=17%  Similarity=0.105  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE---------EeccccccC
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK---------HVLEGHDRG   65 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~---------~~l~gH~~~   65 (120)
                      .++|++++.|++  +||+++...       ..+.+|...+.++.+        +++.|+.++         +.+.+|...
T Consensus       438 ~~~l~~~~~d~~v~~w~~~~~~~-------~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~  510 (577)
T 2ymu_A          438 DQTIASASDDKTVKLWNRNGQLL-------QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS  510 (577)
T ss_dssp             SSEEEEEETTSEEEEEETTSCEE-------EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSC
T ss_pred             CCEEEEEcCCCEEEEEECCCCEE-------EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCC
Confidence            468999999999  999864322       235566665555433        344555554         778899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      |++++|+|++++||||+.|++|++|+.        .  ..++..+.+|.+.+
T Consensus       511 v~~l~~s~dg~~l~s~~~dg~v~lwd~--------~--~~~~~~~~~h~~~v  552 (577)
T 2ymu_A          511 VRGVAFSPDGQTIASASDDKTVKLWNR--------N--GQLLQTLTGHSSSV  552 (577)
T ss_dssp             EEEEEECTTSSCEEEEETTSEEEEECT--------T--SCEEEEEECCSSCE
T ss_pred             EEEEEEcCCCCEEEEEECcCEEEEEeC--------C--CCEEEEEcCCCCCE
Confidence            999999999999999999999996542        1  24566677775544

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.19  E-value=3.6e-11  Score=91.23  Aligned_cols=86  Identities=12%  Similarity=-0.010  Sum_probs=64.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE----------------eccCCCeeE----------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL----------------FGQADAVVK----------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~----------------~~~~D~~v~----------   56 (120)
                      .++|||||.|++  |||+..+......+ ...+.+|...|+++.+                +++.|++++          
T Consensus       101 ~~~las~~~d~~v~lw~~~~~~~~~~~~-~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~  179 (393)
T 4gq1_A          101 SLFLACVCQDNTVRLIITKNETIITQHV-LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI  179 (393)
T ss_dssp             EEEEEEEETTSCEEEEEEETTEEEEEEE-ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred             CCEEEEEeCCCcEEEEECCCCccceeee-ecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence            357999999999  99997654322111 1245678887776554                456788886          


Q ss_pred             EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~   91 (120)
                      ..+.+|...|.+|+|||++. +|++|+.|++|++|+
T Consensus       180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd  215 (393)
T 4gq1_A          180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFD  215 (393)
T ss_dssp             EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred             eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEE
Confidence            34568999999999999985 799999999999654

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.19  E-value=1.4e-10  Score=87.35  Aligned_cols=105  Identities=16%  Similarity=0.103  Sum_probs=74.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCcee-eccCCcceEeeccCCCce---------EEEeccCCCeeE----------Eec---
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKK-NVAPGMGGLEEHLRNPSS---------TDLFGQADAVVK----------HVL---   59 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~-~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v~----------~~l---   59 (120)
                      +++|++|+.|++  +||+...... ...+....+.+|...+.+         ..++++.|++++          ..+   
T Consensus       120 g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~  199 (380)
T 3iz6_a          120 GQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE  199 (380)
T ss_dssp             SSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC
T ss_pred             CCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc
Confidence            578999999999  9998642211 111222346667665543         245666777776          233   


Q ss_pred             --cccccCeEEEEEcC-CCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            60 --EGHDRGVNWACFHP-TLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        60 --~gH~~~V~~v~fsp-~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                        .+|...|.+++|+| ++.+|+||+.|++|+        +||.+....++..+.+|++.+
T Consensus       200 ~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~--------~wd~~~~~~~~~~~~~h~~~v  252 (380)
T 3iz6_a          200 FPSGHTADVLSLSINSLNANMFISGSCDTTVR--------LWDLRITSRAVRTYHGHEGDI  252 (380)
T ss_dssp             SSSSCCSCEEEEEECSSSCCEEEEEETTSCEE--------EEETTTTCCCCEEECCCSSCC
T ss_pred             cCCCCccCeEEEEeecCCCCEEEEEECCCeEE--------EEECCCCCcceEEECCcCCCe
Confidence              58999999999988 778999999999999        677665456677777776654

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.18  E-value=1.2e-10  Score=87.28  Aligned_cols=81  Identities=12%  Similarity=0.035  Sum_probs=61.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|++|+.|++  +||+.+......      +.+|...+.++        .++++.|+.++          ..+.+|..
T Consensus       109 ~~~l~~~~~dg~i~iwd~~~~~~~~~------~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~  182 (420)
T 3vl1_A          109 MRRFILGTTEGDIKVLDSNFNLQREI------DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA  182 (420)
T ss_dssp             SCEEEEEETTSCEEEECTTSCEEEEE------TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS
T ss_pred             CCEEEEEECCCCEEEEeCCCcceeee------cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC
Confidence            578999999999  999986554332      23455555443        34455677665          67789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|.+++|+|+++.|++|+.|++|++|+
T Consensus       183 ~v~~~~~~~~~~~l~s~~~d~~v~iwd  209 (420)
T 3vl1_A          183 TVTDIAIIDRGRNVLSASLDGTIRLWE  209 (420)
T ss_dssp             CEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             cEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence            999999999999999999999999443

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.18  E-value=1e-10  Score=93.38  Aligned_cols=100  Identities=14%  Similarity=0.050  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec--------cCC----CeeE--------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG--------QAD----AVVK--------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~--------~~D----~~v~--------~~l~gH   62 (120)
                      +++||||+.|++  |||+.++....    ...+.+|...|.++.+++        +.+    +.++        ..+.+|
T Consensus        71 g~~lasg~~d~~v~lWd~~~~~~~~----~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh  146 (611)
T 1nr0_A           71 GYYCASGDVHGNVRIWDTTQTTHIL----KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQ  146 (611)
T ss_dssp             SSEEEEEETTSEEEEEESSSTTCCE----EEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCC
T ss_pred             CcEEEEEeCCCCEEEeECCCCccee----eEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCC
Confidence            679999999999  99986432211    024566777777655442        111    1232        567899


Q ss_pred             ccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            63 DRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        63 ~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      ...|++++|+|+++ .|+||+.|++|++        ||.+. ..++..|++|.+.+
T Consensus       147 ~~~v~~v~f~p~~~~~l~s~s~D~~v~l--------wd~~~-~~~~~~l~~H~~~V  193 (611)
T 1nr0_A          147 ARAMNSVDFKPSRPFRIISGSDDNTVAI--------FEGPP-FKFKSTFGEHTKFV  193 (611)
T ss_dssp             SSCEEEEEECSSSSCEEEEEETTSCEEE--------EETTT-BEEEEEECCCSSCE
T ss_pred             CCCceEEEECCCCCeEEEEEeCCCeEEE--------EECCC-CeEeeeeccccCce
Confidence            99999999999987 6999999999995        45443 34456666665543

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.18  E-value=9.8e-11  Score=88.59  Aligned_cols=103  Identities=16%  Similarity=-0.000  Sum_probs=69.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCc-ceEeeccCCCceEE--------EeccCCCeeE-----------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGM-GGLEEHLRNPSSTD--------LFGQADAVVK-----------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~-~~l~~h~~~v~~~~--------~~~~~D~~v~-----------------   56 (120)
                      +++|++|+.|++  +||+.++......... ....+|...+.++.        ++++.|+.++                 
T Consensus       219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~  298 (393)
T 1erj_A          219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN  298 (393)
T ss_dssp             CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred             CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence            579999999999  9999765433221110 11235555555433        3455666654                 


Q ss_pred             -----EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75            57 -----HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR  116 (120)
Q Consensus        57 -----~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (120)
                           .++.+|...|.+++|+|++++|+||+.|++|++        ||... ..++..+++|.+.
T Consensus       299 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~i--------wd~~~-~~~~~~l~~h~~~  354 (393)
T 1erj_A          299 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLF--------WDKKS-GNPLLMLQGHRNS  354 (393)
T ss_dssp             --CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEE--------EETTT-CCEEEEEECCSSC
T ss_pred             CCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEE--------EECCC-CeEEEEECCCCCC
Confidence                 355689999999999999999999999999994        55443 3456666666543

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.17  E-value=1.4e-10  Score=87.36  Aligned_cols=100  Identities=8%  Similarity=-0.100  Sum_probs=65.0

Q ss_pred             CCEEEEEcCCCc-eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCC----eeE--------------E
Q psy75             5 FRLVLSSTPDHH-HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADA----VVK--------------H   57 (120)
Q Consensus         5 ~~~L~S~s~D~t-lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~----~v~--------------~   57 (120)
                      +++|++++.|+. +|+...+......    ....|...+.++.+        .++.|+    .++              .
T Consensus       188 g~~l~s~s~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~  263 (365)
T 4h5i_A          188 GKVVAYITGSSLEVISTVTGSCIARK----TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSK  263 (365)
T ss_dssp             SSEEEEECSSCEEEEETTTCCEEEEE----CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEE
T ss_pred             CceEEeccceeEEEEEeccCcceeee----ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeee
Confidence            578999998888 7776554332111    11223333333222        222222    111              4


Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhh-hhhhhhhh
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAK-LEKREGRA  117 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  117 (120)
                      .+.+|...|++++|||+|++||+|+.|++|+        +||..+ ..++.. +++|.+.+
T Consensus       264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~--------iwd~~~-~~~~~~~~~gH~~~V  315 (365)
T 4h5i_A          264 QVTNRFKGITSMDVDMKGELAVLASNDNSIA--------LVKLKD-LSMSKIFKQAHSFAI  315 (365)
T ss_dssp             EEESSCSCEEEEEECTTSCEEEEEETTSCEE--------EEETTT-TEEEEEETTSSSSCE
T ss_pred             eecCCCCCeEeEEECCCCCceEEEcCCCEEE--------EEECCC-CcEEEEecCcccCCE
Confidence            5678999999999999999999999999999        777666 455665 57776654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.17  E-value=1.7e-10  Score=86.52  Aligned_cols=84  Identities=11%  Similarity=-0.043  Sum_probs=56.0

Q ss_pred             CCEEEEEcCCCc-eE-------ecCCCceeeccCCcceEeeccCCCceEEE-------eccCCCeeE-------------
Q psy75             5 FRLVLSSTPDHH-HK-------QNAQLRKKNVAPGMGGLEEHLRNPSSTDL-------FGQADAVVK-------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t-lW-------di~~~~~~~~~~~~~~l~~h~~~v~~~~~-------~~~~D~~v~-------------   56 (120)
                      +++|||||.|.+ +|       +...+......  .....+|...|.++.+       .++.|++++             
T Consensus        54 G~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~--~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~  131 (357)
T 4g56_B           54 GALLLAASSLSSRTWGGSIWVFKDPEGAPNESL--CTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVN  131 (357)
T ss_dssp             SCEEEEEECSSSSSCCEEEEEESSCC---CGGG--CSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCC
T ss_pred             CCEEEEEcCCCCccccCeEEEEECCCCCcceeE--ecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEE
Confidence            579999998654 44       44332211110  1234566666766543       345677665             


Q ss_pred             -EeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            57 -HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        57 -~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                       ....+|...|++++|+|++++|+||+.|++|++|
T Consensus       132 ~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw  166 (357)
T 4g56_B          132 KFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW  166 (357)
T ss_dssp             CEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred             eeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence             2334899999999999999999999999999954

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.17  E-value=1.2e-10  Score=92.96  Aligned_cols=80  Identities=18%  Similarity=0.131  Sum_probs=62.9

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------Eecc------
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLE------   60 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~------   60 (120)
                      +|+|||.|++  +||....+..      .++.+|...|+++.+        +++.|++++          ..+.      
T Consensus       162 ~l~s~s~D~~v~lwd~~~~~~~------~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~  235 (611)
T 1nr0_A          162 RIISGSDDNTVAIFEGPPFKFK------STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN  235 (611)
T ss_dssp             EEEEEETTSCEEEEETTTBEEE------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSS
T ss_pred             EEEEEeCCCeEEEEECCCCeEe------eeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccc
Confidence            6999999999  9998764433      246678777766544        455677765          3442      


Q ss_pred             -ccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            61 -GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        61 -gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                       +|...|++++|+|++++|+||+.|++|++|+-
T Consensus       236 ~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~  268 (611)
T 1nr0_A          236 VAHSGSVFGLTWSPDGTKIASASADKTIKIWNV  268 (611)
T ss_dssp             CSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             cccCCCEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence             79999999999999999999999999998863

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.16  E-value=5.8e-11  Score=87.43  Aligned_cols=85  Identities=14%  Similarity=-0.017  Sum_probs=60.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------------EEEeccCCCeeE--------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------------TDLFGQADAVVK--------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------------~~~~~~~D~~v~--------------   56 (120)
                      +++|+|||.|++  +||+........   ...+.+|...|.+            ..++++.|++++              
T Consensus       179 ~~~l~sgs~D~~v~lWd~~~~~~~~~---~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~  255 (316)
T 3bg1_A          179 IKRFASGGCDNLIKLWKEEEDGQWKE---EQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSP  255 (316)
T ss_dssp             CCBEECCBTTSBCCEEEECTTSCEEE---EECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBC
T ss_pred             cceEEEecCCCeEEEEEeCCCCccce---eeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhh
Confidence            468999999999  999964311000   0134556554443            344556677765              


Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ..+.+|...|++++|+|++++||+|+.|++|++|+.
T Consensus       256 ~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~  291 (316)
T 3bg1_A          256 KLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE  291 (316)
T ss_dssp             CEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred             hhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence            124568899999999999999999999999997653

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.16  E-value=1.7e-10  Score=93.09  Aligned_cols=98  Identities=22%  Similarity=0.156  Sum_probs=71.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE---------Ee----ccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK---------HV----LEG   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~---------~~----l~g   61 (120)
                      +++|+|||.|++  +||+.++....      .+.+|...|.++.        ++++.|++++         ..    ..+
T Consensus       442 g~~l~sgs~Dg~v~vwd~~~~~~~~------~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~  515 (694)
T 3dm0_A          442 GQFALSGSWDGELRLWDLAAGVSTR------RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEG  515 (694)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTS
T ss_pred             CCEEEEEeCCCcEEEEECCCCccee------EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCC
Confidence            578999999999  99998755432      4667777776654        3456677775         11    247


Q ss_pred             cccCeEEEEEcCCC--CEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            62 HDRGVNWACFHPTL--PLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        62 H~~~V~~v~fsp~~--~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      |...|++++|+|++  ..|+||+.|++|+        +||.++ ..++..+.+|.+.+
T Consensus       516 h~~~v~~~~~~~~~~~~~l~s~s~d~~v~--------vwd~~~-~~~~~~~~~h~~~v  564 (694)
T 3dm0_A          516 HRDWVSCVRFSPNTLQPTIVSASWDKTVK--------VWNLSN-CKLRSTLAGHTGYV  564 (694)
T ss_dssp             CSSCEEEEEECSCSSSCEEEEEETTSCEE--------EEETTT-CCEEEEECCCSSCE
T ss_pred             CCCcEEEEEEeCCCCcceEEEEeCCCeEE--------EEECCC-CcEEEEEcCCCCCE
Confidence            99999999999987  5799999999999        556554 34455666665443

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.15  E-value=3.1e-10  Score=85.63  Aligned_cols=96  Identities=11%  Similarity=0.080  Sum_probs=68.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE-----------EeccccccC
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK-----------HVLEGHDRG   65 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~-----------~~l~gH~~~   65 (120)
                      +++|++|+.|++  +||+.++....      .+.+|...+.++      .++++.|+.++           ..+.+|...
T Consensus       146 ~~~l~~~~~dg~i~iwd~~~~~~~~------~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~  219 (401)
T 4aez_A          146 GSFLSVGLGNGLVDIYDVESQTKLR------TMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSE  219 (401)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCEEE------EECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred             CCEEEEECCCCeEEEEECcCCeEEE------EecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCC
Confidence            468999999999  99998655432      344566555553      33455566554           567789999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      |.+++|+|+++.|++|+.|++|+        +||.+. ..++..+..|.+
T Consensus       220 v~~~~~~~~~~~l~s~~~d~~v~--------iwd~~~-~~~~~~~~~~~~  260 (401)
T 4aez_A          220 VCGLAWRSDGLQLASGGNDNVVQ--------IWDARS-SIPKFTKTNHNA  260 (401)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEE--------EEETTC-SSEEEEECCCSS
T ss_pred             eeEEEEcCCCCEEEEEeCCCeEE--------EccCCC-CCccEEecCCcc
Confidence            99999999999999999999999        555444 344444544433

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.14  E-value=3.1e-10  Score=85.43  Aligned_cols=87  Identities=14%  Similarity=-0.045  Sum_probs=62.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeecc-CCcceEeeccCCCceE---------EEeccCCCeeE----------Eec--c
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVA-PGMGGLEEHLRNPSST---------DLFGQADAVVK----------HVL--E   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~-~~~~~l~~h~~~v~~~---------~~~~~~D~~v~----------~~l--~   60 (120)
                      +++|++|+.|++  +||+......... .....+.+|...+.++         .++++.|+.++          ..+  .
T Consensus        94 ~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  173 (402)
T 2aq5_A           94 DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPD  173 (402)
T ss_dssp             TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTT
T ss_pred             CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecC
Confidence            579999999999  9999764221100 1113566677666553         33445566654          566  7


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +|...|.+++|+|++..|++|+.|++|++|+
T Consensus       174 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  204 (402)
T 2aq5_A          174 VHPDTIYSVDWSRDGALICTSCRDKRVRVIE  204 (402)
T ss_dssp             TCCSCEEEEEECTTSSCEEEEETTSEEEEEE
T ss_pred             CCCCceEEEEECCCCCEEEEEecCCcEEEEe
Confidence            8999999999999999999999999999443

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.14  E-value=7.6e-10  Score=80.36  Aligned_cols=82  Identities=21%  Similarity=0.105  Sum_probs=63.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|++|+.|++  +||+.++....      .+.+|...+.++        .++++.|+.++          ..+.+|..
T Consensus        77 ~~~l~s~~~d~~i~vwd~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~  150 (312)
T 4ery_A           77 SNLLVSASDDKTLKIWDVSSGKCLK------TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD  150 (312)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred             CCEEEEECCCCEEEEEECCCCcEEE------EEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC
Confidence            578999999999  99998755432      355565555443        34455666654          67788999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .|.+++|+|++++|++|+.|++|++|+-
T Consensus       151 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~  178 (312)
T 4ery_A          151 PVSAVHFNRDGSLIVSSSYDGLCRIWDT  178 (312)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             cEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence            9999999999999999999999997653

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.14  E-value=3e-10  Score=84.18  Aligned_cols=83  Identities=20%  Similarity=0.030  Sum_probs=58.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------------------EEEeccCCCeeE--------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------------------TDLFGQADAVVK--------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------------------~~~~~~~D~~v~--------   56 (120)
                      +++|+||+.|++  +||+.+........    ...|...+.+                  ..++++.|+.++        
T Consensus       130 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~  205 (343)
T 2xzm_R          130 NRQILSAGAEREIKLWNILGECKFSSAE----KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQI  205 (343)
T ss_dssp             TTEEEEEETTSCEEEEESSSCEEEECCT----TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEE
T ss_pred             CCEEEEEcCCCEEEEEeccCCceeeeec----ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCce
Confidence            568999999999  99987432211110    0112222222                  234555666664        


Q ss_pred             -EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 -HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 -~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                       ..+.+|...|++++|+|++++|+||+.|++|++|+
T Consensus       206 ~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd  241 (343)
T 2xzm_R          206 RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWD  241 (343)
T ss_dssp             EEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             eEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEE
Confidence             57789999999999999999999999999999664

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.13  E-value=2.4e-10  Score=82.91  Aligned_cols=82  Identities=22%  Similarity=0.043  Sum_probs=57.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCc----------eEEEeccCCCeeE----------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPS----------STDLFGQADAVVK----------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~----------~~~~~~~~D~~v~----------~~l~gH   62 (120)
                      .++|++|+.|+.  +||+.........     +.+|...+.          .+.++++.|+.++          ..+.+|
T Consensus       140 ~~~l~s~s~d~~~~~~d~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h  214 (340)
T 4aow_A          140 NRQIVSGSRDKTIKLWNTLGVCKYTVQ-----DESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGH  214 (340)
T ss_dssp             SSCEEEEETTSCEEEECTTSCEEEEEC-----SSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred             CccceeecCCCeEEEEEeCCCceEEEE-----eccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCC
Confidence            568999999999  9998754332211     112222222          2233444555543          677899


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ...|++++|+|++++|++|+.|++|++|+
T Consensus       215 ~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd  243 (340)
T 4aow_A          215 TGYLNTVTVSPDGSLCASGGKDGQAMLWD  243 (340)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            99999999999999999999999999654

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.12  E-value=3.6e-10  Score=86.14  Aligned_cols=82  Identities=21%  Similarity=0.161  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE-------EEeccCCCeeE----------Eecccccc
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST-------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~-------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      -+++|+||+.|++  +||+.+++...      .+.+|...+.++       .++++.|++++          ..+.+|..
T Consensus       131 ~~~~l~sgs~dg~i~vwd~~~~~~~~------~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~  204 (464)
T 3v7d_B          131 EDNYVITGADDKMIRVYDSINKKFLL------QLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNS  204 (464)
T ss_dssp             ETTEEEEEETTSCEEEEETTTTEEEE------EECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred             CCCEEEEEcCCCcEEEEECCCCcEEE------EEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCC
Confidence            3679999999999  99998765443      355666665543       34555676665          67789999


Q ss_pred             CeEEEEEc--CCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFH--PTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fs--p~~~~laSgs~D~~iki~~   91 (120)
                      .|.+++|+  |++..+++|+.|++|++|+
T Consensus       205 ~v~~l~~~~~~~~~~l~s~s~d~~i~vwd  233 (464)
T 3v7d_B          205 TVRCLDIVEYKNIKYIVTGSRDNTLHVWK  233 (464)
T ss_dssp             CEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred             ccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence            99999998  5778999999999999765

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.10  E-value=1.7e-10  Score=88.25  Aligned_cols=80  Identities=18%  Similarity=0.121  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE---------EeccCCCeeE-------------Eecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVVK-------------HVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~-------------~~l~   60 (120)
                      +++|++|+.|++  +||+.+...       ..+.+|...|+++.         ++++.|++++             ....
T Consensus       221 ~~~l~~g~~dg~i~~wd~~~~~~-------~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~  293 (435)
T 4e54_B          221 SRMVVTGDNVGNVILLNMDGKEL-------WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSL  293 (435)
T ss_dssp             TTEEEEECSSSBEEEEESSSCBC-------CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCC
T ss_pred             CCEEEEEeCCCcEeeeccCccee-------EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEee
Confidence            568999999999  999875321       13455666555543         3455677664             1224


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +|...|++++|+|++.+|+||+.|++|++|+
T Consensus       294 ~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd  324 (435)
T 4e54_B          294 PHRHPVNAACFSPDGARLLTTDQKSEIRVYS  324 (435)
T ss_dssp             BCSSCEEECCBCTTSSEEEEEESSSCEEEEE
T ss_pred             eccccccceeECCCCCeeEEEcCCCEEEEEE
Confidence            7999999999999999999999999999553

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.10  E-value=1.1e-09  Score=80.99  Aligned_cols=81  Identities=7%  Similarity=-0.109  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE-----------Eeccc-
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK-----------HVLEG-   61 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~-----------~~l~g-   61 (120)
                      -+++++||+.|++  +||+.++.......     ..|...+.++        .+.++.|+.++           ..+.+ 
T Consensus       138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~-----~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~  212 (343)
T 3lrv_A          138 NTEYFIWADNRGTIGFQSYEDDSQYIVHS-----AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVD  212 (343)
T ss_dssp             -CCEEEEEETTCCEEEEESSSSCEEEEEC-----CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCC
T ss_pred             CCCEEEEEeCCCcEEEEECCCCcEEEEEe-----cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEecc
Confidence            3579999999999  99998755432110     1122233333        34456677765           46777 


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      |...|++++|+|++.+|+++++| +|++|
T Consensus       213 h~~~v~~l~fs~~g~~l~s~~~~-~v~iw  240 (343)
T 3lrv_A          213 EEAKIKEVKFADNGYWMVVECDQ-TVVCF  240 (343)
T ss_dssp             TTSCEEEEEECTTSSEEEEEESS-BEEEE
T ss_pred             CCCCEEEEEEeCCCCEEEEEeCC-eEEEE
Confidence            99999999999999999999955 99933

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.10  E-value=2.6e-10  Score=87.17  Aligned_cols=99  Identities=7%  Similarity=-0.058  Sum_probs=67.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE---------Eecc---c
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK---------HVLE---G   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~---------~~l~---g   61 (120)
                      +++||+|+.|++  |||+........    ..+.+|...|+++.+         +++.|++++         ..+.   .
T Consensus       132 ~~~lasGs~dg~i~lWd~~~~~~~~~----~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~  207 (435)
T 4e54_B          132 PSTVAVGSKGGDIMLWNFGIKDKPTF----IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDT  207 (435)
T ss_dssp             TTCEEEEETTSCEEEECSSCCSCCEE----ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSS
T ss_pred             CCEEEEEeCCCEEEEEECCCCCceeE----EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCC
Confidence            468999999999  999975432211    134567777776544         455688776         2222   2


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      +...+.+++|+|++.+|++|+.|++|++        ||.+.  .++..+.+|.+.+
T Consensus       208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~--------wd~~~--~~~~~~~~h~~~v  253 (435)
T 4e54_B          208 INIWFCSLDVSASSRMVVTGDNVGNVIL--------LNMDG--KELWNLRMHKKKV  253 (435)
T ss_dssp             CSCCCCCEEEETTTTEEEEECSSSBEEE--------EESSS--CBCCCSBCCSSCE
T ss_pred             CCccEEEEEECCCCCEEEEEeCCCcEee--------eccCc--ceeEEEecccceE
Confidence            3446789999999999999999999995        45432  3455666665443

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.09  E-value=1.1e-09  Score=79.86  Aligned_cols=93  Identities=12%  Similarity=0.009  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE----------Eec---c
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK----------HVL---E   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~----------~~l---~   60 (120)
                      +++|++|+.|++  +||+.+++...      .+.+|...+.++.+         +++.|+.++          ..+   .
T Consensus        85 ~~~l~~~~~dg~i~v~d~~~~~~~~------~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  158 (366)
T 3k26_A           85 HPLLAVAGSRGIIRIINPITMQCIK------HYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE  158 (366)
T ss_dssp             CEEEEEEETTCEEEEECTTTCCEEE------EEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT
T ss_pred             CCEEEEecCCCEEEEEEchhceEee------eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc
Confidence            458999999999  99998655432      34456555554433         344566554          444   6


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhh
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEK  112 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~  112 (120)
                      +|...|.+++|+|++..|++|+.|++|+        +||.+. ..++..++.
T Consensus       159 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~--------i~d~~~-~~~~~~~~~  201 (366)
T 3k26_A          159 GHRDEVLSADYDLLGEKIMSCGMDHSLK--------LWRINS-KRMMNAIKE  201 (366)
T ss_dssp             SCSSCEEEEEECTTSSEEEEEETTSCEE--------EEESCS-HHHHHHHHH
T ss_pred             cccCceeEEEECCCCCEEEEecCCCCEE--------EEECCC-Cccccccce
Confidence            8999999999999999999999999999        677665 334444443

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.08  E-value=2.6e-10  Score=95.66  Aligned_cols=34  Identities=3%  Similarity=-0.235  Sum_probs=30.3

Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ++.+|...|++|+||||| +||+|+.|++|++|+-
T Consensus       570 ~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~  603 (902)
T 2oaj_A          570 AVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR  603 (902)
T ss_dssp             EECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred             EEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence            456899999999999999 9999999999996554

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.08  E-value=4.6e-10  Score=84.84  Aligned_cols=87  Identities=20%  Similarity=0.089  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeecc------CCcceEeeccCCCceE--------EEeccCCCeeE----------Ee
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVA------PGMGGLEEHLRNPSST--------DLFGQADAVVK----------HV   58 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~------~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~   58 (120)
                      +++|+||+.|++  +||+.+.......      .+...+.+|...+.++        .++++.|+.++          ..
T Consensus       268 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~  347 (393)
T 1erj_A          268 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM  347 (393)
T ss_dssp             SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence            568999999999  9999653221100      0112456676666543        34556676664          67


Q ss_pred             ccccccCeEEEEEcC------CCCEEEEEeCCCCEEecC
Q psy75            59 LEGHDRGVNWACFHP------TLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        59 l~gH~~~V~~v~fsp------~~~~laSgs~D~~iki~~   91 (120)
                      +.+|...|.+++|+|      ++++|||||.|++|++|+
T Consensus       348 l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~  386 (393)
T 1erj_A          348 LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK  386 (393)
T ss_dssp             EECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred             ECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence            789999999999886      678999999999999553

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.08  E-value=3.1e-10  Score=84.96  Aligned_cols=103  Identities=11%  Similarity=0.028  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEee-ccCCCceEEEeccCCCeeE----------EeccccccCeEEEEE
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEE-HLRNPSSTDLFGQADAVVK----------HVLEGHDRGVNWACF   71 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~-h~~~v~~~~~~~~~D~~v~----------~~l~gH~~~V~~v~f   71 (120)
                      +++|++++.|++  +||+.+............... .........++++.|+.++          ..+.+|...|++++|
T Consensus        68 g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~  147 (420)
T 3vl1_A           68 GSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKF  147 (420)
T ss_dssp             ETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEE
T ss_pred             CCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEE
Confidence            457899999999  999875332221111110000 0011112344445555543          667899999999999


Q ss_pred             cCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75            72 HPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR  116 (120)
Q Consensus        72 sp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (120)
                      +|++++|++|+.|++|+        +||.++ ..++..+.+|.+.
T Consensus       148 ~~~~~~l~s~s~d~~i~--------iwd~~~-~~~~~~~~~h~~~  183 (420)
T 3vl1_A          148 FPSGEALISSSQDMQLK--------IWSVKD-GSNPRTLIGHRAT  183 (420)
T ss_dssp             CTTSSEEEEEETTSEEE--------EEETTT-CCCCEEEECCSSC
T ss_pred             CCCCCEEEEEeCCCeEE--------EEeCCC-CcCceEEcCCCCc
Confidence            99999999999999999        555544 3345556555443

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.07  E-value=6.5e-10  Score=84.68  Aligned_cols=102  Identities=12%  Similarity=0.098  Sum_probs=69.5

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccC-----------------CcceEeeccCCCce------EEEeccCCCeeE----
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAP-----------------GMGGLEEHLRNPSS------TDLFGQADAVVK----   56 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~-----------------~~~~l~~h~~~v~~------~~~~~~~D~~v~----   56 (120)
                      ++|++|+.|++  +||+.+........                 ....+.+|...+.+      ..++++.|+.++    
T Consensus       218 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~  297 (464)
T 3v7d_B          218 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDV  297 (464)
T ss_dssp             EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence            68999999999  99997543211000                 01134455544443      234455566554    


Q ss_pred             ------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75            57 ------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR  116 (120)
Q Consensus        57 ------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (120)
                            ..+.+|...|.+++|+|+++.+++|+.|++|+        +||.++ ..++..+++|.+.
T Consensus       298 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~--------vwd~~~-~~~~~~~~~h~~~  354 (464)
T 3v7d_B          298 AQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIR--------IWDLEN-GELMYTLQGHTAL  354 (464)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEE--------EEETTT-TEEEEEECCCSSC
T ss_pred             CCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEE--------EEECCC-CcEEEEEeCCCCc
Confidence                  67789999999999999999999999999999        566554 4556666666543

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.07  E-value=6.9e-10  Score=84.81  Aligned_cols=103  Identities=17%  Similarity=0.212  Sum_probs=72.0

Q ss_pred             EEEEEcCCCc--eEecCCCceee-ccCCcceEeeccCCCceEEE---------eccCCCeeE-------------Eeccc
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKN-VAPGMGGLEEHLRNPSSTDL---------FGQADAVVK-------------HVLEG   61 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~-~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~-------------~~l~g   61 (120)
                      +|++|+.|++  +||+....... .......+.+|...+.++.+         +++.|+.++             ..+.+
T Consensus       196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~  275 (430)
T 2xyi_A          196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA  275 (430)
T ss_dssp             EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred             eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence            8999999999  99997632210 00001234456655555433         334455554             45568


Q ss_pred             cccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            62 HDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        62 H~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      |...|++++|+|+++ ++++|+.|++|+        +||.+....|+..+..|.+.+
T Consensus       276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~--------vwd~~~~~~~~~~~~~h~~~v  324 (430)
T 2xyi_A          276 HTAEVNCLSFNPYSEFILATGSADKTVA--------LWDLRNLKLKLHSFESHKDEI  324 (430)
T ss_dssp             CSSCEEEEEECSSCTTEEEEEETTSEEE--------EEETTCTTSCSEEEECCSSCE
T ss_pred             CCCCeEEEEeCCCCCCEEEEEeCCCeEE--------EEeCCCCCCCeEEeecCCCCE
Confidence            999999999999997 799999999999        778777677788887775543

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.06  E-value=3.7e-10  Score=83.63  Aligned_cols=84  Identities=12%  Similarity=-0.001  Sum_probs=55.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE-------------Eeccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK-------------HVLEG   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~-------------~~l~g   61 (120)
                      +++|++|+.|++  +||+.+....   .....+..|...+.++.        ++++.|+.++             ..+.+
T Consensus        67 ~~~l~s~s~d~~v~vwd~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  143 (377)
T 3dwl_C           67 SNRIVTCSQDRNAYVYEKRPDGTW---KQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR  143 (377)
T ss_dssp             TCCEEEEETTSSEEEC------CC---CCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS
T ss_pred             CCEEEEEeCCCeEEEEEcCCCCce---eeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec
Confidence            468999999999  9999764300   00013345555555443        3344555553             45556


Q ss_pred             -cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            62 -HDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        62 -H~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                       |...|++++|+|++++|++|+.|++|++|+
T Consensus       144 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  174 (377)
T 3dwl_C          144 PLRSTILSLDWHPNNVLLAAGCADRKAYVLS  174 (377)
T ss_dssp             SCCSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence             999999999999999999999999999665

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.04  E-value=3e-10  Score=84.11  Aligned_cols=82  Identities=12%  Similarity=0.105  Sum_probs=62.2

Q ss_pred             CCEEEEEcCCCc--eEecCCC--ceeeccCCcceEeeccCCCceEEE--------eccCCCeeE-------------Eec
Q psy75             5 FRLVLSSTPDHH--HKQNAQL--RKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK-------------HVL   59 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~--~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~-------------~~l   59 (120)
                      +++||+|+.|++  +||+.+.  ...      ..+.+|...+.++.+        +++.|++++             ..+
T Consensus        23 g~~l~~~~~d~~i~iw~~~~~~~~~~------~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~   96 (377)
T 3dwl_C           23 RTEFVTTTATNQVELYEQDGNGWKHA------RTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL   96 (377)
T ss_dssp             SSEEECCCSSSCBCEEEEETTEEEEC------CCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEEC
T ss_pred             CCEEEEecCCCEEEEEEccCCceEEE------EEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEe
Confidence            578999999999  9999764  222      245567666665443        445566654             345


Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .+|...|++++|+|+++.|++|+.|++|++|+-
T Consensus        97 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  129 (377)
T 3dwl_C           97 LRLNRAATFVRWSPNEDKFAVGSGARVISVCYF  129 (377)
T ss_dssp             CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC
T ss_pred             cccCCceEEEEECCCCCEEEEEecCCeEEEEEE
Confidence            689999999999999999999999999996653

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.03  E-value=1.6e-09  Score=81.06  Aligned_cols=86  Identities=8%  Similarity=-0.070  Sum_probs=60.5

Q ss_pred             CEEEE--EcCCCc--eEecCCCcee----------eccCCcceEeeccCCCceEEE--------eccCCCe-eE------
Q psy75             6 RLVLS--STPDHH--HKQNAQLRKK----------NVAPGMGGLEEHLRNPSSTDL--------FGQADAV-VK------   56 (120)
Q Consensus         6 ~~L~S--~s~D~t--lWdi~~~~~~----------~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~-v~------   56 (120)
                      ++++.  |+.|++  +||+.++...          ...|....+.+|...+.++.+        +++.|++ ++      
T Consensus       148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~  227 (355)
T 3vu4_A          148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED  227 (355)
T ss_dssp             TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred             cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence            45665  578888  9999764310          001112356778877776543        4567887 75      


Q ss_pred             ----Eecc-c-cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 ----HVLE-G-HDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ----~~l~-g-H~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                          .++. | |...|++++|+|++++|++|+.|++|++|+
T Consensus       228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~  268 (355)
T 3vu4_A          228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFE  268 (355)
T ss_dssp             CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred             CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence                5666 6 999999999999999999999999999664

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.02  E-value=2.2e-09  Score=78.13  Aligned_cols=82  Identities=11%  Similarity=0.037  Sum_probs=62.2

Q ss_pred             CCEEEEEcCCCc--eEecCC-CceeeccCCcceEeeccCCCceEE--------EeccCCCeeE---------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQ-LRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK---------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~-~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~---------~~l~gH~~   64 (120)
                      +++|++|+.|++  +||+.. .....     ..+.+|...+.++.        ++++.|+.++         ..+.+|..
T Consensus        54 g~~l~~~~~dg~i~iw~~~~~~~~~~-----~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  128 (368)
T 3mmy_A           54 GNFLIAGSWANDVRCWEVQDSGQTIP-----KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDA  128 (368)
T ss_dssp             SEEEEEEETTSEEEEEEECTTSCEEE-----EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS
T ss_pred             ceEEEEECCCCcEEEEEcCCCCceeE-----EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccC
Confidence            479999999999  999975 32221     24566777666543        3455677665         34567999


Q ss_pred             CeEEEEE--cCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACF--HPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~f--sp~~~~laSgs~D~~iki~~   91 (120)
                      .|++++|  +|++.+|++|+.|++|++|+
T Consensus       129 ~v~~~~~~~~~~~~~l~~~~~dg~i~vwd  157 (368)
T 3mmy_A          129 PVKTIHWIKAPNYSCVMTGSWDKTLKFWD  157 (368)
T ss_dssp             CEEEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred             ceEEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence            9999999  99999999999999999665

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.01  E-value=5.8e-09  Score=74.85  Aligned_cols=81  Identities=17%  Similarity=0.135  Sum_probs=61.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------EEEeccCCCeeE-----------EeccccccC
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------TDLFGQADAVVK-----------HVLEGHDRG   65 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------~~~~~~~D~~v~-----------~~l~gH~~~   65 (120)
                      +++|||||.|++  +||+.+++...      .+.+|...+.+      +.++++.++.++           ..+.+|...
T Consensus        79 ~~~l~sgs~Dg~v~iw~~~~~~~~~------~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (318)
T 4ggc_A           79 GNYLAVGTSSAEVQLWDVQQQKRLR------NMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE  152 (318)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred             CCEEEEEECCCcEEEeecCCceeEE------EecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCc
Confidence            579999999999  99998765543      34555554433      233444455443           667899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +..++|+++++.|+|++.|++|++|+
T Consensus       153 ~~~~~~~~~~~~l~s~~~d~~i~iwd  178 (318)
T 4ggc_A          153 VCGLRWAPDGRHLASGGNDNLVNVWP  178 (318)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eEEEEEcCCCCEEEEEecCcceeEEE
Confidence            99999999999999999999999764

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.00  E-value=1.7e-09  Score=87.37  Aligned_cols=81  Identities=15%  Similarity=0.119  Sum_probs=62.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++||+|+.|++  +||+.++....      .+..|...+.++.+        +++.|+.++          ..+.+|..
T Consensus        25 ~~~la~~~~~g~v~iwd~~~~~~~~------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~   98 (814)
T 3mkq_A           25 EPWVLTTLYSGRVEIWNYETQVEVR------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD   98 (814)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred             CCEEEEEeCCCEEEEEECCCCceEE------EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC
Confidence            578999999998  99997755432      45566666655433        344565554          67789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|++++|+|+++.|++|+.|++|++|+
T Consensus        99 ~v~~~~~s~~~~~l~~~~~dg~i~vw~  125 (814)
T 3mkq_A           99 YIRSIAVHPTKPYVLSGSDDLTVKLWN  125 (814)
T ss_dssp             CEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             CEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence            999999999999999999999999554

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=98.98  E-value=1.5e-09  Score=80.83  Aligned_cols=102  Identities=9%  Similarity=-0.018  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCC---eeE-----------Eec
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADA---VVK-----------HVL   59 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~---~v~-----------~~l   59 (120)
                      .++|++++.|++  +||+.+.+............+|...+.+         +.+.++.|+   .++           ..+
T Consensus       178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~  257 (416)
T 2pm9_A          178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTL  257 (416)
T ss_dssp             TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCC
T ss_pred             CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEe
Confidence            468999999999  9999875543322111000111222332         233444454   443           566


Q ss_pred             c-ccccCeEEEEEcC-CCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            60 E-GHDRGVNWACFHP-TLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        60 ~-gH~~~V~~v~fsp-~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      . +|...|++++|+| ++.+|++|+.|++|++|        |.+. ..++..+.+|.+
T Consensus       258 ~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~w--------d~~~-~~~~~~~~~~~~  306 (416)
T 2pm9_A          258 NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW--------NPES-AEQLSQFPARGN  306 (416)
T ss_dssp             CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEE--------CSSS-CCEEEEEECSSS
T ss_pred             ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEe--------eCCC-CccceeecCCCC
Confidence            6 8999999999999 88999999999999955        4333 344555555543

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=98.98  E-value=4.8e-09  Score=77.53  Aligned_cols=64  Identities=14%  Similarity=0.079  Sum_probs=43.2

Q ss_pred             EEeccCCCeeE----------Eec-cccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhh-h
Q psy75            46 DLFGQADAVVK----------HVL-EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEK-R  113 (120)
Q Consensus        46 ~~~~~~D~~v~----------~~l-~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~-~  113 (120)
                      .++++.|++++          ..+ ..|...|++++|+|++.+|++|+.|++|+        +||.+........|+. |
T Consensus       142 l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~--------iwd~~~~~~~~~~~~~~h  213 (343)
T 3lrv_A          142 FIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD--------VYNLSSPDQASSRFPVDE  213 (343)
T ss_dssp             EEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE--------EEESSCTTSCCEECCCCT
T ss_pred             EEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE--------EEECCCCCCCccEEeccC
Confidence            34455676665          223 24556899999999999999999999999        6676653332255665 6


Q ss_pred             hhhh
Q psy75           114 EGRA  117 (120)
Q Consensus       114 ~~~~  117 (120)
                      .+.+
T Consensus       214 ~~~v  217 (343)
T 3lrv_A          214 EAKI  217 (343)
T ss_dssp             TSCE
T ss_pred             CCCE
Confidence            5443

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=98.98  E-value=2.7e-09  Score=83.09  Aligned_cols=100  Identities=11%  Similarity=0.004  Sum_probs=72.2

Q ss_pred             CCEEEEEcC-CCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eeccc-c
Q psy75             5 FRLVLSSTP-DHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEG-H   62 (120)
Q Consensus         5 ~~~L~S~s~-D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~g-H   62 (120)
                      +++|++++. |++  +||+.+.....     ..+..|...+.++.        ++++.|+.++          ..+.+ |
T Consensus       456 ~~~l~~~~~~d~~i~~~~~~~~~~~~-----~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h  530 (615)
T 1pgu_A          456 QNYVAVGLEEGNTIQVFKLSDLEVSF-----DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFR  530 (615)
T ss_dssp             SSEEEEEETTTSCEEEEETTEEEEEE-----ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCC
T ss_pred             CCEEEEeecCCCeEEEEECCCccccc-----cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCC
Confidence            789999999 998  99997643210     12334444444433        3344555554          56667 9


Q ss_pred             ccCeEEEEEcC----------CCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            63 DRGVNWACFHP----------TLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        63 ~~~V~~v~fsp----------~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      ...|++++|+|          ++++||+|+.|++|+        +||..+...++..+.+|.+.+
T Consensus       531 ~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~--------iw~~~~~~~~~~~~~~h~~~v  587 (615)
T 1pgu_A          531 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF--------IYSVKRPMKIIKALNAHKDGV  587 (615)
T ss_dssp             SSCEEEEEECCCC------CCSCCEEEEEETTSCEE--------EEESSCTTCCEEETTSSTTCE
T ss_pred             CCceeEEEEcCccccccccccCCCEEEEEcCCCcEE--------EEECCCCceechhhhcCccce
Confidence            99999999999          999999999999999        777666446778888886654

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=98.96  E-value=4.3e-09  Score=77.00  Aligned_cols=83  Identities=17%  Similarity=0.057  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE------------Eecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK------------HVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~------------~~l~   60 (120)
                      +++||+|+.|++  +||+........    ..+.+|...+.++.          ++++.|+.++            ..+.
T Consensus        23 ~~~l~~~~~dg~i~iw~~~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~   98 (379)
T 3jrp_A           23 GKRLATCSSDKTIKIFEVEGETHKLI----DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA   98 (379)
T ss_dssp             SSEEEEEETTSCEEEEEEETTEEEEE----EEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEEC
T ss_pred             CCEEEEEECCCcEEEEecCCCcceee----eEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeec
Confidence            579999999998  999963221110    13445655554433          3445566654            4556


Q ss_pred             ccccCeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75            61 GHDRGVNWACFHPT--LPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~   91 (120)
                      +|...|.+++|+|+  +.+|++++.|++|++|+
T Consensus        99 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d  131 (379)
T 3jrp_A           99 VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE  131 (379)
T ss_dssp             CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred             CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEe
Confidence            79999999999999  89999999999999554

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=98.96  E-value=2.1e-09  Score=83.65  Aligned_cols=81  Identities=12%  Similarity=0.014  Sum_probs=58.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------------------EEeccCCCeeE--------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------------------DLFGQADAVVK--------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------------------~~~~~~D~~v~--------   56 (120)
                      +++|++++.|++  +||+.++........     .|...+.++                  .++++.|+.++        
T Consensus       500 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  574 (615)
T 1pgu_A          500 ETYIAAGDVMGKILLYDLQSREVKTSRWA-----FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM  574 (615)
T ss_dssp             SSEEEEEETTSCEEEEETTTTEEEECCSC-----CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT
T ss_pred             CCEEEEcCCCCeEEEeeCCCCcceeEeec-----CCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc
Confidence            579999999999  999987655433221     033333333                  33344555554        


Q ss_pred             ---EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 ---HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ---~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                         ..+.+|...|++++|+|+++ |+|++.|++|++|+
T Consensus       575 ~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~  611 (615)
T 1pgu_A          575 KIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN  611 (615)
T ss_dssp             CCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred             eechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEe
Confidence               56789999999999999999 99999999999553

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=98.95  E-value=2.5e-09  Score=76.69  Aligned_cols=88  Identities=11%  Similarity=0.003  Sum_probs=56.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcc-------eEeeccCCCceEE-----------EeccCCCee---------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMG-------GLEEHLRNPSSTD-----------LFGQADAVV---------   55 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~-------~l~~h~~~v~~~~-----------~~~~~D~~v---------   55 (120)
                      +++|++++.|++  +||+.............       ....|...+.++.           +.++.|+.+         
T Consensus       124 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~  203 (351)
T 3f3f_A          124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK  203 (351)
T ss_dssp             CSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC
T ss_pred             CcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc
Confidence            578999999999  99997643221110000       0012222333222           222223222         


Q ss_pred             ---EEeccccccCeEEEEEcCCC----CEEEEEeCCCCEEecCC
Q psy75            56 ---KHVLEGHDRGVNWACFHPTL----PLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        56 ---~~~l~gH~~~V~~v~fsp~~----~~laSgs~D~~iki~~~   92 (120)
                         ...+.+|...|++++|+|++    .+|++|+.|++|++|+-
T Consensus       204 ~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~  247 (351)
T 3f3f_A          204 LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKI  247 (351)
T ss_dssp             EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEE
T ss_pred             eeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeC
Confidence               36677999999999999998    78999999999996653

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=98.95  E-value=6.3e-09  Score=74.54  Aligned_cols=85  Identities=15%  Similarity=0.017  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE----------eccCCCeeE----------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL----------FGQADAVVK----------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~----------~~~~D~~v~----------------   56 (120)
                      +++||+|+.|++  +||+.........  ...+.+|...+.++.+          +++.|+.++                
T Consensus        23 ~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~  100 (351)
T 3f3f_A           23 GRHVATCSSDQHIKVFKLDKDTSNWEL--SDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW  100 (351)
T ss_dssp             SSEEEEEETTSEEEEEEECSSSCCEEE--EEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE
T ss_pred             CCEEEEeeCCCeEEEEECCCCCCccee--cceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc
Confidence            578999999999  9999753211000  1234556555554433          334455543                


Q ss_pred             ---EeccccccCeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75            57 ---HVLEGHDRGVNWACFHPT--LPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ---~~l~gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~   91 (120)
                         ..+.+|...|.+++|+|+  +..|++|+.|++|++|+
T Consensus       101 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd  140 (351)
T 3f3f_A          101 NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYD  140 (351)
T ss_dssp             EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEE
T ss_pred             ceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEec
Confidence               455689999999999999  99999999999999554

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=98.95  E-value=4.8e-09  Score=78.91  Aligned_cols=32  Identities=9%  Similarity=0.012  Sum_probs=28.5

Q ss_pred             ccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            59 LEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +.+|...|++++|+|++++|++| .|++|++|+
T Consensus       173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd  204 (447)
T 3dw8_B          173 ANAHTYHINSISINSDYETYLSA-DDLRINLWH  204 (447)
T ss_dssp             CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEE
T ss_pred             ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEE
Confidence            36899999999999999999999 799999544

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=98.94  E-value=8.1e-09  Score=76.21  Aligned_cols=97  Identities=14%  Similarity=0.132  Sum_probs=61.7

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcc---eEeeccCC-CceEEEeccCCCeeE----------EeccccccCeEEE
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMG---GLEEHLRN-PSSTDLFGQADAVVK----------HVLEGHDRGVNWA   69 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~---~l~~h~~~-v~~~~~~~~~D~~v~----------~~l~gH~~~V~~v   69 (120)
                      ++|++++.|++  +||+.++..........   .+.-+... -....+.++.|+.+.          ..+.+|...|.++
T Consensus       113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~  192 (408)
T 4a11_B          113 GMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAV  192 (408)
T ss_dssp             TCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEE
T ss_pred             cEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEE
Confidence            58999999999  99998754432221110   11101000 111344444455443          6778999999999


Q ss_pred             EEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhh
Q psy75            70 CFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKL  110 (120)
Q Consensus        70 ~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~  110 (120)
                      +|+|+++ +|++|+.|++|+        +||.+....++..+
T Consensus       193 ~~~~~~~~ll~~~~~dg~i~--------i~d~~~~~~~~~~~  226 (408)
T 4a11_B          193 SWSPRYDYILATASADSRVK--------LWDVRRASGCLITL  226 (408)
T ss_dssp             EECSSCTTEEEEEETTSCEE--------EEETTCSSCCSEEC
T ss_pred             EECCCCCcEEEEEcCCCcEE--------EEECCCCCcccccc
Confidence            9999998 699999999999        55555444344444

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=98.94  E-value=6.1e-09  Score=75.81  Aligned_cols=87  Identities=10%  Similarity=0.073  Sum_probs=60.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeecc--CC------cceEeeccCCCce----------EEEeccCCCeeE--------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVA--PG------MGGLEEHLRNPSS----------TDLFGQADAVVK--------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~--~~------~~~l~~h~~~v~~----------~~~~~~~D~~v~--------   56 (120)
                      +++|++++.|++  +||+.+.......  +.      ...+..|...+.+          ..+.++.|+.++        
T Consensus       241 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~  320 (366)
T 3k26_A          241 GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED  320 (366)
T ss_dssp             TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred             CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence            789999999999  9998764321000  00      1234445444432          334455666664        


Q ss_pred             ------Eecccc--ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 ------HVLEGH--DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ------~~l~gH--~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                            ..+.+|  ...|++++|+|++++|++|+.|++|++|+
T Consensus       321 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  363 (366)
T 3k26_A          321 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWD  363 (366)
T ss_dssp             GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             CccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence                  256677  79999999999999999999999999554

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=98.93  E-value=1.4e-08  Score=74.92  Aligned_cols=87  Identities=15%  Similarity=0.109  Sum_probs=57.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCc--------ceEeeccCCC---------ceEEEeccCCCeeEEeccccccC
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGM--------GGLEEHLRNP---------SSTDLFGQADAVVKHVLEGHDRG   65 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~--------~~l~~h~~~v---------~~~~~~~~~D~~v~~~l~gH~~~   65 (120)
                      +++|++++.|++  +||+.++.........        ..+.......         ..+.++...++.....+.+|...
T Consensus       257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~  336 (408)
T 4a11_B          257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT  336 (408)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC
T ss_pred             CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe
Confidence            568999999999  9999765432211100        0000000000         11233333445556888899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |++++|+|++++|++|+.|+.|++|+
T Consensus       337 v~~~~~s~~~~~l~s~~~dg~i~iw~  362 (408)
T 4a11_B          337 VDCCVFQSNFQELYSGSRDCNILAWV  362 (408)
T ss_dssp             EEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             EEEEEEcCCCCEEEEECCCCeEEEEe
Confidence            99999999999999999999999553

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=98.93  E-value=4.9e-09  Score=88.73  Aligned_cols=81  Identities=20%  Similarity=0.192  Sum_probs=63.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE----------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK----------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~----------~~l~gH   62 (120)
                      +++|+||+.|++  +||+.+++...      .+.+|...+.++.          ++++.|+.++          .++.+|
T Consensus       669 ~~~l~s~~~d~~v~vwd~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h  742 (1249)
T 3sfz_A          669 DSYIATCSADKKVKIWDSATGKLVH------TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGH  742 (1249)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCC
T ss_pred             CCEEEEEeCCCeEEEEECCCCceEE------EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCC
Confidence            579999999999  99998765443      3555655554433          3444555554          677899


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ...|++++|+|+++.|++|+.|++|++|+
T Consensus       743 ~~~v~~~~~sp~~~~l~s~s~dg~v~vwd  771 (1249)
T 3sfz_A          743 TNSVNHCRFSPDDELLASCSADGTLRLWD  771 (1249)
T ss_dssp             SSCEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred             CCCEEEEEEecCCCEEEEEECCCeEEEEe
Confidence            99999999999999999999999999875

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=98.92  E-value=8.9e-09  Score=77.79  Aligned_cols=86  Identities=13%  Similarity=0.058  Sum_probs=55.7

Q ss_pred             CCEEEEEcCCCc--eEecC---CCceeeccCCc--ceEee----ccCCC----------ceEEEeccCCCeeE-------
Q psy75             5 FRLVLSSTPDHH--HKQNA---QLRKKNVAPGM--GGLEE----HLRNP----------SSTDLFGQADAVVK-------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~---~~~~~~~~~~~--~~l~~----h~~~v----------~~~~~~~~~D~~v~-------   56 (120)
                      +++|++|+.|++  +||+.   .+.........  ..+.-    +...+          ....++++.|+.++       
T Consensus       123 ~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~  202 (437)
T 3gre_A          123 FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL  202 (437)
T ss_dssp             SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence            478999999999  99984   22222111000  01110    11111          22334455566554       


Q ss_pred             ---Eeccc--cccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            57 ---HVLEG--HDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        57 ---~~l~g--H~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                         ..+.+  |...|++++|+|++.+|++|+.|++|++|
T Consensus       203 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw  241 (437)
T 3gre_A          203 ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIW  241 (437)
T ss_dssp             CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred             eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence               66666  89999999999999999999999999944

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=98.92  E-value=8.8e-09  Score=78.20  Aligned_cols=81  Identities=17%  Similarity=0.133  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE-----------EeccccccC
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK-----------HVLEGHDRG   65 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~-----------~~l~gH~~~   65 (120)
                      +++||+|+.|++  +||+.+++...      .+.+|...+.++      .++++.|+.++           .++.+|...
T Consensus       159 g~~lasgs~Dg~v~iWd~~~~~~~~------~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~  232 (420)
T 4gga_A          159 GNYLAVGTSSAEVQLWDVQQQKRLR------NMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE  232 (420)
T ss_dssp             SSEEEEEETTSCEEEEETTTTEEEE------EECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred             CCEEEEEECCCeEEEEEcCCCcEEE------EEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccc
Confidence            579999999999  99998765543      345566555443      34555666654           567899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +..+.|+|++..+++++.|+.+++|+
T Consensus       233 ~~~~~~~~~g~~l~s~~~D~~v~i~~  258 (420)
T 4gga_A          233 VCGLRWAPDGRHLASGGNDNLVNVWP  258 (420)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eeeeeecCCCCeeeeeeccccceEEe
Confidence            99999999999999999999999764

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=98.92  E-value=5.3e-09  Score=79.58  Aligned_cols=80  Identities=23%  Similarity=0.169  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE----------EeccccccC
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~----------~~l~gH~~~   65 (120)
                      -+++|++|+.|++  +||+.+++...      .+.+|...+.++      .++++.|++++          .++.+|...
T Consensus       128 ~g~~l~sg~~dg~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~  201 (445)
T 2ovr_B          128 CGNRIVSGSDDNTLKVWSAVTGKCLR------TLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTST  201 (445)
T ss_dssp             ETTEEEEEETTSCEEEEETTTCCEEE------ECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred             cCCEEEEEECCCcEEEEECCCCcEEE------EEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCc
Confidence            3688999999999  99998765443      344566655543      34455666654          677899999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |.+++|++  ..+++|+.|++|++|+
T Consensus       202 v~~~~~~~--~~l~s~s~dg~i~~wd  225 (445)
T 2ovr_B          202 VRCMHLHE--KRVVSGSRDATLRVWD  225 (445)
T ss_dssp             EEEEEEET--TEEEEEETTSEEEEEE
T ss_pred             EEEEEecC--CEEEEEeCCCEEEEEE
Confidence            99999964  6799999999999554

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=98.91  E-value=7.1e-09  Score=87.75  Aligned_cols=81  Identities=20%  Similarity=0.154  Sum_probs=61.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|+||+.|++  +||+.++....      .+.+|...|.++.+        +++.|++++          .++.+|..
T Consensus       627 ~~~l~s~~~d~~i~vw~~~~~~~~~------~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~  700 (1249)
T 3sfz_A          627 GQRIASCGADKTLQVFKAETGEKLL------DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSE  700 (1249)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred             CCEEEEEeCCCeEEEEECCCCCEEE------EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC
Confidence            578999999999  99998765443      35566666655433        344566554          67789999


Q ss_pred             CeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPT--LPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~--~~~laSgs~D~~iki~~   91 (120)
                      .|++++|+|+  +.++++|+.|++|++|+
T Consensus       701 ~v~~~~~~~~~~~~~l~sg~~d~~v~vwd  729 (1249)
T 3sfz_A          701 QVNCCHFTNKSNHLLLATGSNDFFLKLWD  729 (1249)
T ss_dssp             CEEEEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred             cEEEEEEecCCCceEEEEEeCCCeEEEEE
Confidence            9999999995  45899999999999543

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=98.91  E-value=1.1e-08  Score=76.04  Aligned_cols=78  Identities=14%  Similarity=0.055  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE--------------Eec
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK--------------HVL   59 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~--------------~~l   59 (120)
                      +++|++|+.|++  +||+.+. ..      ..+..|...+.++         .++++.|+.++              ..+
T Consensus       175 ~~~l~~~~~d~~i~i~d~~~~-~~------~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~  247 (383)
T 3ei3_B          175 RQMLATGDSTGRLLLLGLDGH-EI------FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM  247 (383)
T ss_dssp             TTEEEEEETTSEEEEEETTSC-EE------EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE
T ss_pred             CCEEEEECCCCCEEEEECCCC-EE------EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe
Confidence            578999999999  9999532 22      2345565555443         34455566654              223


Q ss_pred             cccccCeEEEEEcC-CCCEEEEEeCCCCEEec
Q psy75            60 EGHDRGVNWACFHP-TLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        60 ~gH~~~V~~v~fsp-~~~~laSgs~D~~iki~   90 (120)
                       +|...|++++|+| ++..|++++.|++|++|
T Consensus       248 -~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iw  278 (383)
T 3ei3_B          248 -PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVY  278 (383)
T ss_dssp             -ECSSCEEEEEECTTTSCEEEEEESSSEEEEE
T ss_pred             -cCCCceEEEEEcCCCCCEEEEEcCCCcEEEE
Confidence             7999999999999 99999999999999944

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=98.91  E-value=6.7e-09  Score=79.06  Aligned_cols=77  Identities=22%  Similarity=0.172  Sum_probs=41.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------EEEeccCCCeeE-------------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------TDLFGQADAVVK-------------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------~~~~~~~D~~v~-------------~~l~gH~   63 (120)
                      +++|++|+.|++  +||+.++....      .+.+|...+.+      ..++++.|+.++             ..+.+|.
T Consensus       183 ~~~l~sg~~dg~i~vwd~~~~~~~~------~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~  256 (435)
T 1p22_A          183 ERVIITGSSDSTVRVWDVNTGEMLN------TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR  256 (435)
T ss_dssp             SSEEEEEETTSCEEEEESSSCCEEE------EECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCS
T ss_pred             CCEEEEEcCCCeEEEEECCCCcEEE------EEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC
Confidence            456666666666  66665443322      22333333322      223344444443             3445677


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEe
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDH   89 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki   89 (120)
                      ..|.+++|  +++.|++|+.|++|++
T Consensus       257 ~~v~~~~~--~~~~l~s~~~dg~i~v  280 (435)
T 1p22_A          257 AAVNVVDF--DDKYIVSASGDRTIKV  280 (435)
T ss_dssp             SCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred             CcEEEEEe--CCCEEEEEeCCCeEEE
Confidence            77777777  4566777777777773

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=98.90  E-value=9.4e-09  Score=75.15  Aligned_cols=83  Identities=22%  Similarity=0.111  Sum_probs=57.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------------------EEeccCCCeeE-----
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------------------DLFGQADAVVK-----   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------------------~~~~~~D~~v~-----   56 (120)
                      +++|++++.|++  +||+........    ..+..|...+.++                     .+.++.|+.++     
T Consensus       115 ~~~l~~~~~d~~i~v~d~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~  190 (379)
T 3jrp_A          115 GPLLLVASSDGKVSVVEFKENGTTSP----IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN  190 (379)
T ss_dssp             CSEEEEEETTSEEEEEECCTTSCCCE----EEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE
T ss_pred             CCEEEEecCCCcEEEEecCCCCceee----EEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence            568999999999  999976422110    1233333333322                     33344555543     


Q ss_pred             ---------EeccccccCeEEEEEcCC---CCEEEEEeCCCCEEecC
Q psy75            57 ---------HVLEGHDRGVNWACFHPT---LPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ---------~~l~gH~~~V~~v~fsp~---~~~laSgs~D~~iki~~   91 (120)
                               ..+.+|...|++++|+|+   +.+|++|+.|++|++|+
T Consensus       191 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd  237 (379)
T 3jrp_A          191 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT  237 (379)
T ss_dssp             TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred             CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence                     466789999999999999   88999999999999654

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=98.90  E-value=7.9e-09  Score=75.11  Aligned_cols=44  Identities=16%  Similarity=0.137  Sum_probs=34.7

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      .|++++|+|++++|++|+.|++|+        +||... ..++..+++|.+.+
T Consensus       275 ~v~~~~~sp~~~~l~s~~~dg~i~--------iwd~~~-~~~~~~~~~~~~~v  318 (368)
T 3mmy_A          275 AVNGIAFHPVHGTLATVGSDGRFS--------FWDKDA-RTKLKTSEQLDQPI  318 (368)
T ss_dssp             CEEEEEECTTTCCEEEEETTSCEE--------EEETTT-TEEEEECCCCSSCE
T ss_pred             ceEEEEEecCCCEEEEEccCCeEE--------EEECCC-CcEEEEecCCCCCc
Confidence            799999999999999999999999        566554 44566666665443

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=98.90  E-value=1.3e-08  Score=73.95  Aligned_cols=79  Identities=11%  Similarity=0.043  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------------------------------EEEecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------------------------------TDLFGQ   50 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------------------------------~~~~~~   50 (120)
                      +++|++++.|++  +||+.++.......       +...+.+                                +.++..
T Consensus       230 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~  302 (369)
T 3zwl_B          230 LTYFITSSRDTNSFLVDVSTLQVLKKYE-------TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK  302 (369)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEEE-------CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred             CCEEEEecCCceEEEEECCCCceeeeec-------CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence            568999999999  99998754432211       1111111                                112222


Q ss_pred             CCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            51 ADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        51 ~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      ..+.....+.+|...|++++|+|++++|++|+.|++|++|
T Consensus       303 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw  342 (369)
T 3zwl_B          303 IFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLH  342 (369)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             CCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEE
Confidence            2233346778999999999999999999999999999943

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=98.89  E-value=6.4e-09  Score=78.16  Aligned_cols=83  Identities=17%  Similarity=0.141  Sum_probs=57.2

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE-----------------Ee
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK-----------------HV   58 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~-----------------~~   58 (120)
                      ++++++.|++  +||+......  ......+.+|...|.++.+         +++.|+.++                 ..
T Consensus        49 ~~~~~~~~g~i~v~~~~~~~~~--~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~  126 (402)
T 2aq5_A           49 LICEASGGGAFLVLPLGKTGRV--DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVIT  126 (402)
T ss_dssp             EEBCCSSSCCEEEEETTCCEEC--CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEE
T ss_pred             EEEEEcCCCEEEEEECccCCCC--CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEE
Confidence            4556888998  9998643221  0111235567666665443         344566554                 45


Q ss_pred             ccccccCeEEEEEcCCC-CEEEEEeCCCCEEecC
Q psy75            59 LEGHDRGVNWACFHPTL-PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~~-~~laSgs~D~~iki~~   91 (120)
                      +.+|...|++++|+|++ .+|+||+.|++|++|+
T Consensus       127 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd  160 (402)
T 2aq5_A          127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD  160 (402)
T ss_dssp             EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred             ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence            66899999999999998 6999999999999443

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=98.89  E-value=1.2e-08  Score=74.79  Aligned_cols=83  Identities=13%  Similarity=0.004  Sum_probs=57.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE--------------Eecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK--------------HVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~--------------~~l~   60 (120)
                      +++|++++.|++  +||+.+......    ..+..|...+.++        .+.++.|+.++              ....
T Consensus        64 ~~~l~~~~~dg~i~vwd~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~  139 (372)
T 1k8k_C           64 SNRIVTCGTDRNAYVWTLKGRTWKPT----LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK  139 (372)
T ss_dssp             TTEEEEEETTSCEEEEEEETTEEEEE----EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT
T ss_pred             CCEEEEEcCCCeEEEEECCCCeeeee----EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec
Confidence            578999999999  999976542211    0122344444433        33444555543              2335


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +|...|.+++|+|++++|++|+.|++|++|+
T Consensus       140 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d  170 (372)
T 1k8k_C          140 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS  170 (372)
T ss_dssp             TCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ccCCCeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence            7899999999999999999999999999665

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=98.89  E-value=2.5e-09  Score=80.83  Aligned_cols=81  Identities=14%  Similarity=0.117  Sum_probs=58.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEee--ccCCCceE--------EEeccCCCeeE----------Eecc-c
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEE--HLRNPSST--------DLFGQADAVVK----------HVLE-G   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~--h~~~v~~~--------~~~~~~D~~v~----------~~l~-g   61 (120)
                      +++|++|+.|++  +||+.++....      .+..  |...+.++        .++++.|+.++          .++. +
T Consensus       182 ~~~l~~~~~d~~i~iwd~~~~~~~~------~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  255 (437)
T 3gre_A          182 KSLLVALTNLSRVIIFDIRTLERLQ------IIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG  255 (437)
T ss_dssp             CEEEEEEETTSEEEEEETTTCCEEE------EEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT
T ss_pred             CCEEEEEeCCCeEEEEeCCCCeeeE------EEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC
Confidence            679999999999  99998755432      3444  55555543        33455676664          4554 7


Q ss_pred             cccCeEEEEEc----CCCCEEEEEeCCCCEEecC
Q psy75            62 HDRGVNWACFH----PTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fs----p~~~~laSgs~D~~iki~~   91 (120)
                      |...|.+++|+    |++.+|++|+.|++|++|+
T Consensus       256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd  289 (437)
T 3gre_A          256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWN  289 (437)
T ss_dssp             TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred             CCCceEEEEeccccCCCccEEEEEcCCCcEEEEE
Confidence            88899999555    5677999999999999544

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=98.89  E-value=1e-08  Score=78.09  Aligned_cols=81  Identities=17%  Similarity=0.071  Sum_probs=61.7

Q ss_pred             CCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE----------Eecccccc
Q psy75             3 AIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         3 ~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +-+++|++|+.|++  +||+.++....      .+.+|...+.++      .++++.|++++          .++.+|..
T Consensus       141 ~d~~~l~~g~~dg~i~iwd~~~~~~~~------~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~  214 (435)
T 1p22_A          141 YDDQKIVSGLRDNTIKIWDKNTLECKR------ILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE  214 (435)
T ss_dssp             CCSSEEEEEESSSCEEEEESSSCCEEE------EECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCS
T ss_pred             ECCCEEEEEeCCCeEEEEeCCCCeEEE------EEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC
Confidence            45789999999999  99998765443      355566655543      34556676664          67789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|.+++|++  ..+++|+.|++|++|+
T Consensus       215 ~v~~l~~~~--~~l~s~s~dg~i~vwd  239 (435)
T 1p22_A          215 AVLHLRFNN--GMMVTCSKDRSIAVWD  239 (435)
T ss_dssp             CEEEEECCT--TEEEEEETTSCEEEEE
T ss_pred             cEEEEEEcC--CEEEEeeCCCcEEEEe
Confidence            999999986  4999999999999554

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=98.88  E-value=6.9e-09  Score=77.14  Aligned_cols=97  Identities=9%  Similarity=-0.063  Sum_probs=64.2

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE---------Eecc---cc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK---------HVLE---GH   62 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~---------~~l~---gH   62 (120)
                      ++|++|+.|++  +||+.+.......    .+.+|...+.++         .++++.|+.++         ..+.   +|
T Consensus        87 ~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~  162 (383)
T 3ei3_B           87 TTVAVGSKGGDIILWDYDVQNKTSFI----QGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSW  162 (383)
T ss_dssp             TEEEEEEBTSCEEEEETTSTTCEEEE----CCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCS
T ss_pred             CEEEEEcCCCeEEEEeCCCcccceee----ecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCC
Confidence            68999999999  9999864433211    112354444443         33445677665         3333   45


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR  116 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (120)
                      ...|.+++|+|+++.|++|+.|++|++        ||.+  ..++..+.+|.+.
T Consensus       163 ~~~v~~~~~~~~~~~l~~~~~d~~i~i--------~d~~--~~~~~~~~~h~~~  206 (383)
T 3ei3_B          163 DYWYCCVDVSVSRQMLATGDSTGRLLL--------LGLD--GHEIFKEKLHKAK  206 (383)
T ss_dssp             SCCEEEEEEETTTTEEEEEETTSEEEE--------EETT--SCEEEEEECSSSC
T ss_pred             CCCeEEEEECCCCCEEEEECCCCCEEE--------EECC--CCEEEEeccCCCc
Confidence            588999999999999999999999994        5542  3345555555443

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=98.88  E-value=5.9e-09  Score=79.35  Aligned_cols=79  Identities=20%  Similarity=0.164  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE----------EeccccccC
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK----------HVLEGHDRG   65 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~----------~~l~gH~~~   65 (120)
                      -+++|++|+.|++  +||+.++....      .+.+|...+.++      .++++.|+.++          ..+.+|...
T Consensus       168 ~~~~l~s~~~dg~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~  241 (445)
T 2ovr_B          168 RDNIIISGSTDRTLKVWNAETGECIH------TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA  241 (445)
T ss_dssp             ETTEEEEEETTSCEEEEETTTTEEEE------EECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSC
T ss_pred             cCCEEEEEeCCCeEEEEECCcCcEEE------EECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCccc
Confidence            3578999999999  99997755432      344555555543      33455566554          567789999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      |.+++|  ++..+++|+.|++|++|
T Consensus       242 v~~~~~--~~~~l~~~~~dg~i~iw  264 (445)
T 2ovr_B          242 VRCVQY--DGRRVVSGAYDFMVKVW  264 (445)
T ss_dssp             EEEEEE--CSSCEEEEETTSCEEEE
T ss_pred             EEEEEE--CCCEEEEEcCCCEEEEE
Confidence            999998  66788999999999944

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=98.88  E-value=7.6e-09  Score=78.35  Aligned_cols=81  Identities=7%  Similarity=-0.155  Sum_probs=56.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE-----------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK-----------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~-----------------   56 (120)
                      +++|||||.|+|  |||+.......      .+..|...+.++         .++++.|++++                 
T Consensus       156 ~~~las~s~D~tv~~Wd~~~~~~~~------~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~  229 (393)
T 4gq1_A          156 EQVIASVGDDCTLIIWRLTDEGPIL------AGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTE  229 (393)
T ss_dssp             EEEEEEEETTSEEEEEEEETTEEEE------EEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---------
T ss_pred             CCEEEEEECCCeEEEEECCCCceee------eecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccC
Confidence            469999999999  99996543321      234454444433         33455666664                 


Q ss_pred             ------------------EeccccccCeEEEEEc-CCCCEEEEEeCCCCEEecC
Q psy75            57 ------------------HVLEGHDRGVNWACFH-PTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ------------------~~l~gH~~~V~~v~fs-p~~~~laSgs~D~~iki~~   91 (120)
                                        ....+|...|.+++|+ |+++.|++++.|+++++|+
T Consensus       230 ~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd  283 (393)
T 4gq1_A          230 LVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN  283 (393)
T ss_dssp             -CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred             CcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence                              1124788899999987 8999999999999999553

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=98.87  E-value=1.7e-08  Score=72.68  Aligned_cols=98  Identities=11%  Similarity=0.031  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEe--eccCCCceE--------EEeccCCCeeE------------Eecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLE--EHLRNPSST--------DLFGQADAVVK------------HVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~--~h~~~v~~~--------~~~~~~D~~v~------------~~l~   60 (120)
                      +++|++++ |++  +||+.........   ..+.  .|...+.++        .+.++.|+.++            ..+.
T Consensus        63 ~~~l~~~~-dg~i~iw~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~  138 (337)
T 1gxr_A           63 TRHVYTGG-KGCVKVWDISHPGNKSPV---SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT  138 (337)
T ss_dssp             SSEEEEEC-BSEEEEEETTSTTCCSCS---EEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE
T ss_pred             CcEEEEcC-CCeEEEEECCCCCceeee---ecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc
Confidence            56899999 888  9999754321111   1111  343333332        23344455443            5567


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      +|...|.+++|+|+++.|++++.|+.|+        +||.+. ..++..+++|.+
T Consensus       139 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~--------~~d~~~-~~~~~~~~~~~~  184 (337)
T 1gxr_A          139 SSAPACYALAISPDSKVCFSCCSDGNIA--------VWDLHN-QTLVRQFQGHTD  184 (337)
T ss_dssp             CSSSCEEEEEECTTSSEEEEEETTSCEE--------EEETTT-TEEEEEECCCSS
T ss_pred             cCCCceEEEEECCCCCEEEEEeCCCcEE--------EEeCCC-CceeeeeecccC
Confidence            8999999999999999999999999999        555444 344555555443

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=98.87  E-value=1.8e-08  Score=73.75  Aligned_cols=81  Identities=14%  Similarity=0.104  Sum_probs=61.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCc--eeeccCCcceEeeccCCCceEEE--------eccCCCeeE------------Eecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLR--KKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK------------HVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~--~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~------------~~l~   60 (120)
                      +++|++|+.|++  +||+.+..  ..      ..+.+|...+.++.+        +++.|+.++            ..+.
T Consensus        20 ~~~l~~~~~d~~v~i~~~~~~~~~~~------~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~   93 (372)
T 1k8k_C           20 RTQIAICPNNHEVHIYEKSGNKWVQV------HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL   93 (372)
T ss_dssp             SSEEEEECSSSEEEEEEEETTEEEEE------EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECC
T ss_pred             CCEEEEEeCCCEEEEEeCCCCcEEee------eeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEee
Confidence            568999999999  99997653  22      245567666665443        345566654            2346


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +|...|.+++|+|+++.|++|+.|+.|++|+
T Consensus        94 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d  124 (372)
T 1k8k_C           94 RINRAARCVRWAPNEKKFAVGSGSRVISICY  124 (372)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSSEEEEE
T ss_pred             cCCCceeEEEECCCCCEEEEEeCCCEEEEEE
Confidence            7999999999999999999999999999653

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=98.85  E-value=1.2e-08  Score=75.65  Aligned_cols=90  Identities=16%  Similarity=0.076  Sum_probs=63.5

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEee---c---cCCCceEE--------EeccCC---CeeE----------E
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEE---H---LRNPSSTD--------LFGQAD---AVVK----------H   57 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~---h---~~~v~~~~--------~~~~~D---~~v~----------~   57 (120)
                      +|++++.|++  +||+.+.....      .+..   |   ...+.++.        +.++.|   +.++          .
T Consensus       199 ~l~~~~~dg~i~i~d~~~~~~~~------~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~  272 (397)
T 1sq9_A          199 LIATGFNNGTVQISELSTLRPLY------NFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG  272 (397)
T ss_dssp             EEEEECTTSEEEEEETTTTEEEE------EEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred             eEEEEeCCCcEEEEECCCCceeE------EEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccc
Confidence            8999999999  99998654432      2333   4   44444332        233344   4443          6


Q ss_pred             eccc-------------cccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhh
Q psy75            58 VLEG-------------HDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        58 ~l~g-------------H~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~  111 (120)
                      .+.+             |...|.+++|+|++++|++|+.|++|+        +||.+. ..++..++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~--------iwd~~~-~~~~~~~~  330 (397)
T 1sq9_A          273 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR--------FWDVKT-KERITTLN  330 (397)
T ss_dssp             EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE--------EEETTT-TEEEEEEE
T ss_pred             eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE--------EEEcCC-CceeEEEe
Confidence            6777             999999999999999999999999999        666555 34566665

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=98.85  E-value=3.9e-08  Score=70.73  Aligned_cols=83  Identities=8%  Similarity=-0.076  Sum_probs=58.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|++++.|++  +||+.+......    ..+..|...+.++        .+.++.|+.++          ..+.+|..
T Consensus       109 ~~~l~~~~~d~~i~~~d~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~  184 (337)
T 1gxr_A          109 GCTLIVGGEASTLSIWDLAAPTPRIK----AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD  184 (337)
T ss_dssp             SSEEEEEESSSEEEEEECCCC--EEE----EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred             CCEEEEEcCCCcEEEEECCCCCccee----eecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC
Confidence            568999999998  999976542111    1234444444332        33344455543          67778999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|.+++|+|+++.|++++.|+.|++|+
T Consensus       185 ~i~~~~~~~~~~~l~~~~~dg~i~~~d  211 (337)
T 1gxr_A          185 GASCIDISNDGTKLWTGGLDNTVRSWD  211 (337)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             ceEEEEECCCCCEEEEEecCCcEEEEE
Confidence            999999999999999999999999664

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=98.84  E-value=1.4e-08  Score=75.88  Aligned_cols=46  Identities=9%  Similarity=0.172  Sum_probs=37.3

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCC-EEecCCCCceEeeCCCCccchhhhh
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCL-LDHGPNLFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~-iki~~~~~~~~~~~~~~~~~~~~~~  111 (120)
                      ..+.+|...|++++|||++++|||||.|++ |+        +||.+. ..++..|+
T Consensus       189 ~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~--------iwd~~~-~~~~~~~~  235 (355)
T 3vu4_A          189 VLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIR--------VFKTED-GVLVREFR  235 (355)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTCSEEE--------EEETTT-CCEEEEEE
T ss_pred             EEEEccCCceEEEEECCCCCEEEEEeCCCCEEE--------EEECCC-CcEEEEEE
Confidence            456799999999999999999999999999 99        556554 34455555

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=98.83  E-value=1.2e-08  Score=72.88  Aligned_cols=78  Identities=19%  Similarity=0.073  Sum_probs=53.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEee-ccCCCceE-------EEeccCCCee----------EEecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEE-HLRNPSST-------DLFGQADAVV----------KHVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~-h~~~v~~~-------~~~~~~D~~v----------~~~l~gH~~   64 (120)
                      +++|++++.|++  +||......        .+.. |...+.++       .+.++.|+.+          ...+.+|..
T Consensus       155 ~~~l~~~~~d~~i~i~d~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~  226 (313)
T 3odt_A          155 ENKFLTASADKTIKLWQNDKVIK--------TFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHES  226 (313)
T ss_dssp             TTEEEEEETTSCEEEEETTEEEE--------EECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred             CCEEEEEECCCCEEEEecCceEE--------EEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCc
Confidence            578999999999  999543211        1111 22223222       2334445444          367789999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|++++|+|++ .|++|+.|++|++|+
T Consensus       227 ~i~~~~~~~~~-~l~~~~~dg~v~iwd  252 (313)
T 3odt_A          227 FVYCIKLLPNG-DIVSCGEDRTVRIWS  252 (313)
T ss_dssp             CEEEEEECTTS-CEEEEETTSEEEEEC
T ss_pred             eEEEEEEecCC-CEEEEecCCEEEEEE
Confidence            99999999999 588999999999655

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=98.83  E-value=7.9e-09  Score=75.14  Aligned_cols=80  Identities=11%  Similarity=-0.030  Sum_probs=57.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce-----------EEEeccCCCeeE----------E----
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS-----------TDLFGQADAVVK----------H----   57 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~-----------~~~~~~~D~~v~----------~----   57 (120)
                      +++|++++.|++  +||+.+.....       ...|...+.+           ..+.++.|+.++          .    
T Consensus       180 ~~~l~~~~~d~~i~i~d~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  252 (357)
T 3i2n_A          180 ERVVCAGYDNGDIKLFDLRNMALRW-------ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFAS  252 (357)
T ss_dssp             CCEEEEEETTSEEEEEETTTTEEEE-------EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEE
T ss_pred             CCEEEEEccCCeEEEEECccCceee-------ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceee
Confidence            578999999999  99998755432       1223222222           334455666664          1    


Q ss_pred             -eccccccCeEEEEEcCCCC-EEEEEeCCCCEEecC
Q psy75            58 -VLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGP   91 (120)
Q Consensus        58 -~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~   91 (120)
                       .+.+|...|++++|+|+++ +|++|+.|+.|++|+
T Consensus       253 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd  288 (357)
T 3i2n_A          253 VSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWK  288 (357)
T ss_dssp             EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred             eccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEee
Confidence             2238999999999999998 899999999999654

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=98.83  E-value=2.4e-08  Score=76.24  Aligned_cols=102  Identities=16%  Similarity=0.123  Sum_probs=67.1

Q ss_pred             CEEEEEcCCCc--eEecCCCceeec----cCCcceEeeccCCCceEE---------EeccCCCeeE--------------
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNV----APGMGGLEEHLRNPSSTD---------LFGQADAVVK--------------   56 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~----~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~--------------   56 (120)
                      ++|++++.|++  +||+........    ......+.+|...+.++.         ++++.|+.+.              
T Consensus       142 ~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~  221 (430)
T 2xyi_A          142 CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI  221 (430)
T ss_dssp             EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE
T ss_pred             cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee
Confidence            58999999998  999964110000    001135667776665543         3455566554              


Q ss_pred             ---EeccccccCeEEEEEcC-CCCEEEEEeCCCCEEecCCCCceEeeCCCC--ccchhhhhhhhh
Q psy75            57 ---HVLEGHDRGVNWACFHP-TLPLIVSGKGLCLLDHGPNLFPVVLDSSDF--FVPIAKLEKREG  115 (120)
Q Consensus        57 ---~~l~gH~~~V~~v~fsp-~~~~laSgs~D~~iki~~~~~~~~~~~~~~--~~~~~~~~~~~~  115 (120)
                         ..+.+|...|++++|+| ++.+|++++.|++|+        +||.+..  ..++..+..|..
T Consensus       222 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~--------i~d~~~~~~~~~~~~~~~~~~  278 (430)
T 2xyi_A          222 DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLM--------IWDTRNNNTSKPSHTVDAHTA  278 (430)
T ss_dssp             ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEE--------EEETTCSCSSSCSEEEECCSS
T ss_pred             ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEE--------EEECCCCCCCcceeEeecCCC
Confidence               34558999999999999 567999999999999        6665543  245555555543

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=98.82  E-value=2.6e-08  Score=73.66  Aligned_cols=87  Identities=10%  Similarity=-0.120  Sum_probs=56.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceE---------eeccCCCce-------EEEeccCCCeeE----------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGL---------EEHLRNPSS-------TDLFGQADAVVK----------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l---------~~h~~~v~~-------~~~~~~~D~~v~----------   56 (120)
                      +++|++++.|++  +||+.++............         ......+.+       ..+.++.|+.+.          
T Consensus       161 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~  240 (425)
T 1r5m_A          161 GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPT  240 (425)
T ss_dssp             SSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCS
T ss_pred             CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCcee
Confidence            568999999999  9999765443322111000         000000222       223344444443          


Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..+.+|...|.+++|+|+++.|++++.|+.|++|+
T Consensus       241 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d  275 (425)
T 1r5m_A          241 GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH  275 (425)
T ss_dssp             EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred             eeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence            56778999999999999999999999999999554

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=98.82  E-value=1.6e-08  Score=74.87  Aligned_cols=81  Identities=11%  Similarity=-0.128  Sum_probs=59.1

Q ss_pred             CCEEEEEcCC---Cc--eEecCCCceeeccCCcceEee-------------ccCCCceEE--------EeccCCCeeE--
Q psy75             5 FRLVLSSTPD---HH--HKQNAQLRKKNVAPGMGGLEE-------------HLRNPSSTD--------LFGQADAVVK--   56 (120)
Q Consensus         5 ~~~L~S~s~D---~t--lWdi~~~~~~~~~~~~~~l~~-------------h~~~v~~~~--------~~~~~D~~v~--   56 (120)
                      +++|++++.|   ++  +||+.+.....      .+..             |...+.++.        ++++.|+.++  
T Consensus       245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  318 (397)
T 1sq9_A          245 GSLLAIAHDSNSFGCITLYETEFGERIG------SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW  318 (397)
T ss_dssp             TTEEEEEEEETTEEEEEEEETTTCCEEE------EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred             CCEEEEEecCCCCceEEEEECCCCcccc------eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence            5789999999   77  99997654433      2333             555554433        3344565554  


Q ss_pred             --------Eecc------cc---------------ccCeEEEEEcCCC----------CEEEEEeCCCCEEecC
Q psy75            57 --------HVLE------GH---------------DRGVNWACFHPTL----------PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 --------~~l~------gH---------------~~~V~~v~fsp~~----------~~laSgs~D~~iki~~   91 (120)
                              ..+.      +|               ...|++++|+|++          ++|++|+.|+.|++|+
T Consensus       319 d~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~  392 (397)
T 1sq9_A          319 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR  392 (397)
T ss_dssp             ETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred             EcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence                    5666      77               9999999999998          7999999999999553

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=98.81  E-value=3e-09  Score=82.41  Aligned_cols=88  Identities=13%  Similarity=-0.060  Sum_probs=58.9

Q ss_pred             CCEEE----EEcCCCc--eEecCCC-----ceeeccCCcceEeeccCCCceE---------EEeccCCCeeE--------
Q psy75             5 FRLVL----SSTPDHH--HKQNAQL-----RKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK--------   56 (120)
Q Consensus         5 ~~~L~----S~s~D~t--lWdi~~~-----~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~--------   56 (120)
                      +++|+    ||+.|++  +||+.+.     ...........+.+|...+.++         .++++.|++++        
T Consensus       104 g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~  183 (434)
T 2oit_A          104 NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV  183 (434)
T ss_dssp             SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE
T ss_pred             CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc
Confidence            56788    8889999  9998642     0000000001233455555443         33455677765        


Q ss_pred             --EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 --HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 --~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                        ....+|...|++++|||+|+.|++|+.|++|++|+-
T Consensus       184 ~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~  221 (434)
T 2oit_A          184 KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLP  221 (434)
T ss_dssp             EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred             ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEcc
Confidence              234578999999999999999999999999997754

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=98.81  E-value=3.9e-08  Score=70.18  Aligned_cols=75  Identities=13%  Similarity=-0.021  Sum_probs=55.1

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE-------EeccCCCeeE----------EeccccccCeE
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD-------LFGQADAVVK----------HVLEGHDRGVN   67 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~-------~~~~~D~~v~----------~~l~gH~~~V~   67 (120)
                      .+++++.|++  +||+.++....      .+..|...+.++.       +.++.|+.++          ..+.+|...|.
T Consensus       197 ~~~~~~~dg~i~i~d~~~~~~~~------~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~  270 (313)
T 3odt_A          197 HFISCSNDGLIKLVDMHTGDVLR------TYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIW  270 (313)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEE
T ss_pred             eEEEccCCCeEEEEECCchhhhh------hhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEE
Confidence            4889999999  99998655432      3445555554433       3344555554          67788999999


Q ss_pred             EEEEcCCCCEEEEEeCCCCEE
Q psy75            68 WACFHPTLPLIVSGKGLCLLD   88 (120)
Q Consensus        68 ~v~fsp~~~~laSgs~D~~ik   88 (120)
                      +++|+|+++ +++++.|+.|+
T Consensus       271 ~~~~~~~~~-~~~~~~dg~i~  290 (313)
T 3odt_A          271 SVDCMSNGD-IIVGSSDNLVR  290 (313)
T ss_dssp             EEEECTTSC-EEEEETTSCEE
T ss_pred             EEEEccCCC-EEEEeCCCcEE
Confidence            999999998 56799999999

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=98.81  E-value=1.5e-08  Score=83.00  Aligned_cols=83  Identities=17%  Similarity=0.057  Sum_probs=60.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE------------Eecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK------------HVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~------------~~l~   60 (120)
                      +++|++|+.|++  +||+.+......    ..+.+|...|.++.          ++++.|+.++            ..+.
T Consensus        21 g~~latg~~dg~I~vwd~~~~~~~~~----~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~   96 (753)
T 3jro_A           21 GKRLATCSSDKTIKIFEVEGETHKLI----DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA   96 (753)
T ss_dssp             SCCEEEEETTTEEEEEEEETTEEEEE----EEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEEC
T ss_pred             CCeEEEEECCCcEEEEecCCCCCccc----eeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccccc
Confidence            578999999999  999874222111    23555665555443          3445666664            4556


Q ss_pred             ccccCeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75            61 GHDRGVNWACFHPT--LPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~   91 (120)
                      +|...|++++|+|+  +..+++|+.|++|++|+
T Consensus        97 ~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwd  129 (753)
T 3jro_A           97 VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE  129 (753)
T ss_dssp             CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred             CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEE
Confidence            89999999999999  89999999999999554

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=98.81  E-value=2.5e-08  Score=73.79  Aligned_cols=85  Identities=7%  Similarity=-0.068  Sum_probs=54.6

Q ss_pred             EEEEEcCCCc--eEec----CCCc------eeeccCC----cceEeeccCCCceEE--------EeccCCCeeE------
Q psy75             7 LVLSSTPDHH--HKQN----AQLR------KKNVAPG----MGGLEEHLRNPSSTD--------LFGQADAVVK------   56 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi----~~~~------~~~~~~~----~~~l~~h~~~v~~~~--------~~~~~D~~v~------   56 (120)
                      +||+|+.|++  +||+    .++.      .......    .....+|...+.++.        +.++.|+.++      
T Consensus        60 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~  139 (425)
T 1r5m_A           60 ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTG  139 (425)
T ss_dssp             EEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred             EEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence            9999999999  9999    6654      1111111    001112444555433        3344555543      


Q ss_pred             ---EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 ---HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ---~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                         ..+.+|...|.+++|+|+++.|++++.|+.|++|+
T Consensus       140 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  177 (425)
T 1r5m_A          140 ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWN  177 (425)
T ss_dssp             CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEE
Confidence               67788999999999999999999999999999543

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=98.78  E-value=2.9e-08  Score=72.09  Aligned_cols=96  Identities=17%  Similarity=0.069  Sum_probs=59.6

Q ss_pred             CEEEEEcC---CCc--eEecCCCceeeccCCcceEeeccCCCce-----------EEEeccCCCeeE-----------Ee
Q psy75             6 RLVLSSTP---DHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS-----------TDLFGQADAVVK-----------HV   58 (120)
Q Consensus         6 ~~L~S~s~---D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~-----------~~~~~~~D~~v~-----------~~   58 (120)
                      .++++|+.   |++  +||+.++.....     ...+|...+.+           ..+.++.|+.++           ..
T Consensus        32 ~l~~~~s~~~~d~~v~iw~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  106 (357)
T 3i2n_A           32 KFVTMGNFARGTGVIQLYEIQHGDLKLL-----REIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYS  106 (357)
T ss_dssp             EEEEEEC--CCCEEEEEEEECSSSEEEE-----EEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEE
T ss_pred             eEEEecCccCCCcEEEEEeCCCCcccce-----eeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEE
Confidence            46677877   888  999986543221     11234333333           233444555554           56


Q ss_pred             ccccccCeEEEE------EcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhh
Q psy75            59 LEGHDRGVNWAC------FHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKRE  114 (120)
Q Consensus        59 l~gH~~~V~~v~------fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~  114 (120)
                      +.+|...|.+++      |+|+++.|++|+.|++|+        +||.+.-..++..++.++
T Consensus       107 ~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~--------vwd~~~~~~~~~~~~~~~  160 (357)
T 3i2n_A          107 VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK--------VWDPRQKDDPVANMEPVQ  160 (357)
T ss_dssp             ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE--------EECTTSCSSCSEEECCCT
T ss_pred             EEecccceEEEeeccccccCCCccEEEEEeCCCeEE--------EEeCCCCCCcceeccccC
Confidence            779999999994      578999999999999999        455444333455554443

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=98.77  E-value=3.6e-08  Score=74.13  Aligned_cols=100  Identities=13%  Similarity=0.121  Sum_probs=64.2

Q ss_pred             CCEEEEEcCCCc--eEecCC-Cceeecc-CCcceEeeccCCCceE---------EEeccCCCeeE--------------E
Q psy75             5 FRLVLSSTPDHH--HKQNAQ-LRKKNVA-PGMGGLEEHLRNPSST---------DLFGQADAVVK--------------H   57 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~-~~~~~~~-~~~~~l~~h~~~v~~~---------~~~~~~D~~v~--------------~   57 (120)
                      +++|++| .|++  +||+.. ....... ..+..+.+|...+.++         .++++.|+.++              .
T Consensus       189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  267 (447)
T 3dw8_B          189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSK  267 (447)
T ss_dssp             SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCE
T ss_pred             CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceee
Confidence            5789998 7998  999973 2221110 0001233444444433         34455566654              4


Q ss_pred             ecccccc------------CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhh
Q psy75            58 VLEGHDR------------GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKRE  114 (120)
Q Consensus        58 ~l~gH~~------------~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~  114 (120)
                      .+.+|..            .|.+++|+|++++|++++. ++|+        +||.+....++..+.+|.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~--------iwd~~~~~~~~~~~~~~~  327 (447)
T 3dw8_B          268 LFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVK--------VWDLNMENRPVETYQVHE  327 (447)
T ss_dssp             EECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEE--------EEETTCCSSCSCCEESCG
T ss_pred             EeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEE--------EEeCCCCccccceeeccc
Confidence            4556665            9999999999999999998 9999        677665466777777764

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=98.76  E-value=4.1e-08  Score=73.00  Aligned_cols=102  Identities=10%  Similarity=0.041  Sum_probs=68.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCc------eeeccCCcceEeeccCCCceEE---------EeccCCCeeE----------E
Q psy75             5 FRLVLSSTPDHH--HKQNAQLR------KKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVVK----------H   57 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~------~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~----------~   57 (120)
                      +++|++++.|++  +||+.+..      .....   ..+..|...+.++.         ++++.|+.++          .
T Consensus       126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~  202 (416)
T 2pm9_A          126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP---GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI  202 (416)
T ss_dssp             TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC---CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCcccccccccccc---ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce
Confidence            568999999999  99997654      11110   11234555554433         3444566554          4


Q ss_pred             ecccc------ccCeEEEEEcCCC-CEEEEEeCCC---CEEecCCCCceEeeCCCCccchhhhh-hhhhhh
Q psy75            58 VLEGH------DRGVNWACFHPTL-PLIVSGKGLC---LLDHGPNLFPVVLDSSDFFVPIAKLE-KREGRA  117 (120)
Q Consensus        58 ~l~gH------~~~V~~v~fsp~~-~~laSgs~D~---~iki~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  117 (120)
                      .+..|      ...|.+++|+|++ .++++++.|+   +|+        +||.+....++..+. +|.+.+
T Consensus       203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~--------~~d~~~~~~~~~~~~~~~~~~v  265 (416)
T 2pm9_A          203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL--------IWDLRNANTPLQTLNQGHQKGI  265 (416)
T ss_dssp             EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC--------EEETTSTTSCSBCCCSCCSSCE
T ss_pred             EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE--------EEeCCCCCCCcEEeecCccCce
Confidence            44444      7899999999997 5899999998   999        777776556777777 665443

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=98.76  E-value=2.6e-08  Score=76.22  Aligned_cols=81  Identities=7%  Similarity=-0.051  Sum_probs=56.4

Q ss_pred             CCEE-EEEcCCCc--eEecC--CCceeeccCCcceEe--eccCCCceE--------EEeccCCCeeE----------E--
Q psy75             5 FRLV-LSSTPDHH--HKQNA--QLRKKNVAPGMGGLE--EHLRNPSST--------DLFGQADAVVK----------H--   57 (120)
Q Consensus         5 ~~~L-~S~s~D~t--lWdi~--~~~~~~~~~~~~~l~--~h~~~v~~~--------~~~~~~D~~v~----------~--   57 (120)
                      +++| ++|+.|++  +||+.  ++....      .+.  .|...+.++        .++++.|+.+.          .  
T Consensus       114 ~~~l~~~~~~dg~v~iwd~~~~~~~~~~------~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~  187 (450)
T 2vdu_B          114 ESRLIACADSDKSLLVFDVDKTSKNVLK------LRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT  187 (450)
T ss_dssp             SSEEEEEEGGGTEEEEEEECSSSSSCEE------EEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred             CCEEEEEECCCCeEEEEECcCCCCceee------eeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccc
Confidence            4564 89999999  99997  543322      222  233344443        33444455543          1  


Q ss_pred             --eccccccCeEEEEEcCC---CCEEEEEeCCCCEEecC
Q psy75            58 --VLEGHDRGVNWACFHPT---LPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        58 --~l~gH~~~V~~v~fsp~---~~~laSgs~D~~iki~~   91 (120)
                        .+.+|...|++++|+|+   +++|++|+.|++|++|+
T Consensus       188 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd  226 (450)
T 2vdu_B          188 QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISH  226 (450)
T ss_dssp             CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEE
T ss_pred             ceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEE
Confidence              66789999999999999   88999999999999543

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=98.74  E-value=2.6e-08  Score=81.57  Aligned_cols=82  Identities=21%  Similarity=0.177  Sum_probs=59.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE----------EEeccCCCeeE------------Eecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST----------DLFGQADAVVK------------HVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~----------~~~~~~D~~v~------------~~l~   60 (120)
                      +++|+||+.|++  +||+.++.....    ..+..|...+.++          .++++.|+.++            ..+.
T Consensus        67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~----~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~  142 (753)
T 3jro_A           67 GTILASCSYDGKVLIWKEENGRWSQI----AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID  142 (753)
T ss_dssp             CSEEEEEETTSCEEEEEEETTEEEEE----EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCccccc----ccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee
Confidence            679999999999  999976541111    1233454444443          34445666664            4556


Q ss_pred             ccccCeEEEEEcC-------------CCCEEEEEeCCCCEEec
Q psy75            61 GHDRGVNWACFHP-------------TLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        61 gH~~~V~~v~fsp-------------~~~~laSgs~D~~iki~   90 (120)
                      +|...|.+++|+|             ++..|++|+.|++|++|
T Consensus       143 ~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iw  185 (753)
T 3jro_A          143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW  185 (753)
T ss_dssp             CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEE
T ss_pred             cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEE
Confidence            8999999999999             58899999999999955

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=98.74  E-value=4.1e-08  Score=79.28  Aligned_cols=81  Identities=22%  Similarity=0.181  Sum_probs=61.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE-----------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK-----------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~-----------~~l~gH~   63 (120)
                      +++|++|+.|++  +||+.+++...      .+.+|...+.++.        ++++.|+.++           ..+.+|.
T Consensus        67 ~~~l~~~~~dg~i~vw~~~~~~~~~------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~  140 (814)
T 3mkq_A           67 KNWIIVGSDDFRIRVFNYNTGEKVV------DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE  140 (814)
T ss_dssp             GTEEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCS
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEE------EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCC
Confidence            468999999999  99998765432      3455655555433        3445566554           5677899


Q ss_pred             cCeEEEEEcC-CCCEEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHP-TLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp-~~~~laSgs~D~~iki~~   91 (120)
                      ..|.+++|+| ++..|++|+.|++|++|+
T Consensus       141 ~~v~~~~~~p~~~~~l~~~~~dg~v~vwd  169 (814)
T 3mkq_A          141 HFVMCVAFNPKDPSTFASGCLDRTVKVWS  169 (814)
T ss_dssp             SCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred             CcEEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence            9999999999 788999999999999764

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=98.73  E-value=1.2e-08  Score=78.30  Aligned_cols=80  Identities=8%  Similarity=-0.188  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCCceEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEEEEcC---CCCEEEE
Q psy75             4 IFRLVLSSTPDHHHKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHP---TLPLIVS   80 (120)
Q Consensus         4 ~~~~L~S~s~D~tlWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp---~~~~laS   80 (120)
                      +++++++++.+.++|++.+++....     ...+|...|..+.++  .|+..+.++.+|...+..++|+|   ++++|||
T Consensus       126 ~~~~l~s~g~~~~v~~l~~g~lv~s-----s~~g~d~~V~~~~~s--~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaS  198 (356)
T 2w18_A          126 EKQVLLKSGNIKAVLGLTKRRLVSS-----SGTLSDQQVEVMTFA--EDGGGKENQFLMPPEETILTFAEVQGMQEALLG  198 (356)
T ss_dssp             CCEEEEEEEEEEEEEEETTTEEEEE-----ESSSTTCEEEEEEEC--TTSCEEEEEEECCCSSCEEEEEEEETSTTEEEE
T ss_pred             cccEEEeCCCeEEEEecCCCcEEEe-----cccCCCCcEEEEEEC--CCCceeeeeccCCCceeeEEeeccCCCCceEEE
Confidence            5678888886644999865443221     123455555444443  46888888899999999999999   7799999


Q ss_pred             EeCCCCEEec
Q psy75            81 GKGLCLLDHG   90 (120)
Q Consensus        81 gs~D~~iki~   90 (120)
                      ||.|++||||
T Consensus       199 gS~D~TIkIW  208 (356)
T 2w18_A          199 TTIMNNIVIW  208 (356)
T ss_dssp             EETTSEEEEE
T ss_pred             ecCCCcEEEE
Confidence            9999999944

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=98.72  E-value=1.1e-07  Score=79.76  Aligned_cols=87  Identities=10%  Similarity=-0.078  Sum_probs=58.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceee-ccCCc----ceEeeccCCCceEEEe---------ccCCCee---------EEec
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKN-VAPGM----GGLEEHLRNPSSTDLF---------GQADAVV---------KHVL   59 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~-~~~~~----~~l~~h~~~v~~~~~~---------~~~D~~v---------~~~l   59 (120)
                      +++|++|+.|++  +||+.+..... ..+..    ..+.+|...|.++.++         ++.|+.+         .+.+
T Consensus       110 g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~vlWd~~~~~~~~~~  189 (902)
T 2oaj_A          110 LDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTLTYSLVENEIKQSF  189 (902)
T ss_dssp             CSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEEEEETTTTEEEEEE
T ss_pred             CCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcEEEECCCCceEEEE
Confidence            578999999999  99998654320 00000    1224565666554433         3344443         2444


Q ss_pred             ccc------------------ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            60 EGH------------------DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        60 ~gH------------------~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .+|                  ...|++++|+|+|++||||+.|++|++|+
T Consensus       190 ~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd  239 (902)
T 2oaj_A          190 IYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWD  239 (902)
T ss_dssp             CCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             ecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Confidence            444                  57899999999999999999999999664

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=98.70  E-value=1.5e-07  Score=68.25  Aligned_cols=101  Identities=10%  Similarity=-0.007  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCCc--eEecCC-CceeeccCCcceEeeccCCCce---------EEEeccCCCeeE--------------
Q psy75             3 AIFRLVLSSTPDHH--HKQNAQ-LRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAVVK--------------   56 (120)
Q Consensus         3 ~~~~~L~S~s~D~t--lWdi~~-~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v~--------------   56 (120)
                      +-++.+++++.|++  +||+.+ ......    .....|...+.+         ..+.++.|+.++              
T Consensus       158 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~  233 (342)
T 1yfq_A          158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGT----IEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS  233 (342)
T ss_dssp             ECSSEEEEEESTTEEEEEESSCCTTCCCE----EEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT
T ss_pred             ecCCcEEEEeCCCeEEEEECCccccccce----eeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc
Confidence            44566899999998  999976 332100    001112222222         223333444433              


Q ss_pred             --Eecccccc---------CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhh-hhh
Q psy75            57 --HVLEGHDR---------GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKR-EGR  116 (120)
Q Consensus        57 --~~l~gH~~---------~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~-~~~  116 (120)
                        ..+.+|..         .|++++|+|++++|++|+.|++|+        +||..+ ..++..+.+| .+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~--------vwd~~~-~~~~~~~~~~h~~~  296 (342)
T 1yfq_A          234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS--------CWNLQT-RKKIKNFAKFNEDS  296 (342)
T ss_dssp             TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEE--------EEETTT-TEEEEECCCCSSSE
T ss_pred             cceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEE--------EEcCcc-HhHhhhhhcccCCC
Confidence              34556755         999999999999999999999999        666554 3446666665 443

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=98.68  E-value=2.4e-07  Score=69.67  Aligned_cols=78  Identities=15%  Similarity=0.116  Sum_probs=54.0

Q ss_pred             CEEEEEc--CCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEe--ccCCCeeE------------Eec
Q psy75             6 RLVLSST--PDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLF--GQADAVVK------------HVL   59 (120)
Q Consensus         6 ~~L~S~s--~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~--~~~D~~v~------------~~l   59 (120)
                      .++++|+  .|++  +||+.++......       .+...+.++        .+.  +..|+.++            ..+
T Consensus       273 ~ll~~~~gs~d~~i~i~d~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~  345 (401)
T 4aez_A          273 NLLATGGGTMDKQIHFWNAATGARVNTV-------DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI  345 (401)
T ss_dssp             TEEEEECCTTTCEEEEEETTTCCEEEEE-------ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEE
T ss_pred             CEEEEecCCCCCEEEEEECCCCCEEEEE-------eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEe
Confidence            5778876  7888  9999875543321       122222222        222  33566554            346


Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      .+|...|.+++|+|++++|++|+.|++|++|
T Consensus       346 ~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw  376 (401)
T 4aez_A          346 PAHDTRVLYSALSPDGRILSTAASDENLKFW  376 (401)
T ss_dssp             ECCSSCCCEEEECTTSSEEEEECTTSEEEEE
T ss_pred             cCCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence            6899999999999999999999999999943

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=98.67  E-value=1.8e-07  Score=67.91  Aligned_cols=80  Identities=18%  Similarity=0.078  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|++|+.|++  +||+.++....      .+.+|...+.++.        ++++.|+.++          ..+. |..
T Consensus        44 ~~~l~~~~~dg~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~  116 (369)
T 3zwl_B           44 GDLLFSCSKDSSASVWYSLNGERLG------TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPV  116 (369)
T ss_dssp             SCEEEEEESSSCEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSS
T ss_pred             CCEEEEEeCCCEEEEEeCCCchhhh------hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCC
Confidence            578999999998  99998755443      3445655555433        3445566654          3444 888


Q ss_pred             CeEEEEEcCCCCEEEEEeCC-----CCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGL-----CLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D-----~~iki~~   91 (120)
                      .|.+++|+|+++.+++++.+     +.|++|+
T Consensus       117 ~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d  148 (369)
T 3zwl_B          117 PVKRVEFSPCGNYFLAILDNVMKNPGSINIYE  148 (369)
T ss_dssp             CEEEEEECTTSSEEEEEECCBTTBCCEEEEEE
T ss_pred             CeEEEEEccCCCEEEEecCCccCCCCEEEEEE
Confidence            99999999999999999998     9999764

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=98.59  E-value=2.7e-07  Score=66.79  Aligned_cols=83  Identities=11%  Similarity=-0.041  Sum_probs=57.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE----------Eeccc--
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK----------HVLEG--   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~----------~~l~g--   61 (120)
                      +++|++|+.|++  +||+........   ...+..|...+.++         .++++.|+.++          ..+.+  
T Consensus        23 ~~~l~~~~~d~~v~iw~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~   99 (342)
T 1yfq_A           23 KSLLLITSWDGSLTVYKFDIQAKNVD---LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNE   99 (342)
T ss_dssp             GTEEEEEETTSEEEEEEEETTTTEEE---EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCC
T ss_pred             CCEEEEEcCCCeEEEEEeCCCCcccc---ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccC
Confidence            468999999999  999976441000   01233455544432         33444555554          45567  


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |...|++++|+| +..|++++.|++|++|+
T Consensus       100 ~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd  128 (342)
T 1yfq_A          100 ANLGICRICKYG-DDKLIAASWDGLIEVID  128 (342)
T ss_dssp             CCSCEEEEEEET-TTEEEEEETTSEEEEEC
T ss_pred             CCCceEEEEeCC-CCEEEEEcCCCeEEEEc
Confidence            999999999999 99999999999999665

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.58  E-value=1.4e-07  Score=76.61  Aligned_cols=76  Identities=8%  Similarity=0.020  Sum_probs=51.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccC-----CCceE--------EEeccCCCeeE-------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLR-----NPSST--------DLFGQADAVVK-------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~-----~v~~~--------~~~~~~D~~v~-------------   56 (120)
                      +.+||++|.|++  +||..+  ...      .+. |..     .+.++        .++++.|++++             
T Consensus        97 G~~LAs~s~dg~V~iwd~~~--~l~------~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~  167 (588)
T 2j04_A           97 DDWMAVLSNNGNVSVFKDNK--MLT------NLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE  167 (588)
T ss_dssp             SSCEEEEETTSCEEEEETTE--EEE------ECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred             CCEEEEEeCCCcEEEEeCCc--eee------ecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence            568999999999  999643  111      112 221     12222        33445565554             


Q ss_pred             ----Eec----cccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 ----HVL----EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ----~~l----~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                          .++    .||.+.|.+|+|||+|  +|+++.|+++++|+
T Consensus       168 ~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd  208 (588)
T 2j04_A          168 FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMT  208 (588)
T ss_dssp             CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEEC
T ss_pred             ceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEE
Confidence                233    6788999999999999  78899999999555

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=98.58  E-value=4.4e-07  Score=69.35  Aligned_cols=84  Identities=14%  Similarity=0.045  Sum_probs=58.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE-----------EEeccCCCeeE----------Ee-cc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST-----------DLFGQADAVVK----------HV-LE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~-----------~~~~~~D~~v~----------~~-l~   60 (120)
                      +++|++|+.|+.  +|++..+.....  ....+.+|...+.++           .++++.|+.++          .. +.
T Consensus       161 ~~~l~~~~~~g~v~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~  238 (450)
T 2vdu_B          161 DTTVIIADKFGDVYSIDINSIPEEKF--TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF  238 (450)
T ss_dssp             SSEEEEEETTSEEEEEETTSCCCSSC--CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC
T ss_pred             CCEEEEEeCCCcEEEEecCCcccccc--cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec
Confidence            468999999998  898865432210  001344555544443           33444566654          33 56


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +|...|++++|+ ++++|+||+.|++|++|+
T Consensus       239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd  268 (450)
T 2vdu_B          239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWD  268 (450)
T ss_dssp             CCSSCEEEEEEC-STTEEEEEESSSEEEEEE
T ss_pred             CCCCceEEEEEC-CCCEEEEEeCCCeEEEEE
Confidence            899999999999 999999999999999553

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.54  E-value=1e-07  Score=77.29  Aligned_cols=78  Identities=12%  Similarity=-0.086  Sum_probs=58.1

Q ss_pred             CCEEEEEcCCCceEecCCCceeeccCCcceEeeccCCCceEEEecc-CCCeeE-------Eecc-ccccCeEEEEEcCCC
Q psy75             5 FRLVLSSTPDHHHKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQ-ADAVVK-------HVLE-GHDRGVNWACFHPTL   75 (120)
Q Consensus         5 ~~~L~S~s~D~tlWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~-~D~~v~-------~~l~-gH~~~V~~v~fsp~~   75 (120)
                      |+++||||.|+|+-|...+         ..+.+|...+.++.+++. .++.+.       ..+. +|...|.+|+|||+|
T Consensus        27 G~~iASas~D~TV~d~~~~---------~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG   97 (588)
T 2j04_A           27 GTLYLTTFPDISIGQPKYA---------KDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPID   97 (588)
T ss_dssp             SCEEEECSSSEEEEEECCC---------SCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSS
T ss_pred             CCEEEEEcCCceeeccccc---------ceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCC
Confidence            5789999999993264322         134578888888888763 122221       3444 678899999999999


Q ss_pred             CEEEEEeCCCCEEecC
Q psy75            76 PLIVSGKGLCLLDHGP   91 (120)
Q Consensus        76 ~~laSgs~D~~iki~~   91 (120)
                      .+||+++.|++|++|+
T Consensus        98 ~~LAs~s~dg~V~iwd  113 (588)
T 2j04_A           98 DWMAVLSNNGNVSVFK  113 (588)
T ss_dssp             SCEEEEETTSCEEEEE
T ss_pred             CEEEEEeCCCcEEEEe
Confidence            9999999999999886

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=98.14  E-value=5.8e-06  Score=61.91  Aligned_cols=85  Identities=12%  Similarity=-0.001  Sum_probs=53.6

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCee----------EEeccccccC
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVV----------KHVLEGHDRG   65 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v----------~~~l~gH~~~   65 (120)
                      .++++++.|++  +||+.++......+. ..+.+|...+++        +.+.++.|+.+          ...+.+|...
T Consensus       135 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~  213 (433)
T 3bws_A          135 RLAIPLLEDEGMDVLDINSGQTVRLSPP-EKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW  213 (433)
T ss_dssp             EEEEEBTTSSSEEEEETTTCCEEEECCC-HHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS
T ss_pred             eEEEEeCCCCeEEEEECCCCeEeeecCc-ccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC
Confidence            46777788887  999987654432211 012233333332        22333334444          3566789999


Q ss_pred             eEEEEEcCCCCEE-EEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLI-VSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~l-aSgs~D~~iki~~   91 (120)
                      +.+++|+|+++.+ ++++.|++|++|+
T Consensus       214 ~~~~~~~~~~~~l~~~~~~~~~i~~~d  240 (433)
T 3bws_A          214 SKILLYDPIRDLVYCSNWISEDISVID  240 (433)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             eeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence            9999999999876 6666899999554

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=98.04  E-value=2.4e-05  Score=57.73  Aligned_cols=78  Identities=8%  Similarity=-0.015  Sum_probs=49.0

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCCee----------EEecccccc
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAVV----------KHVLEGHDR   64 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v----------~~~l~gH~~   64 (120)
                      .++++++.|++  +||+.+++....      +..|. .+.+         +.+.++.|+.+          ...+..|. 
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~~~~------~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-   74 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKVTAT------IPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-   74 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEE------EECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-
T ss_pred             EEEEEcCCCCEEEEEECCCCeEEEE------eecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-
Confidence            46889999999  999987654432      22221 1111         12233334443          34554444 


Q ss_pred             CeEEEEEcCCCCEE-EEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLI-VSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~l-aSgs~D~~iki~~   91 (120)
                      .+.+++|+|+++.| ++++.|++|++|+
T Consensus        75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d  102 (391)
T 1l0q_A           75 SPQGVAVSPDGKQVYVTNMASSTLSVID  102 (391)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CccceEECCCCCEEEEEECCCCEEEEEE
Confidence            99999999999865 5666789999654

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=97.84  E-value=0.00017  Score=53.80  Aligned_cols=80  Identities=8%  Similarity=-0.189  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE---------EeccCCCeeE----------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVVK----------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~----------~~l~gH~   63 (120)
                      ++++++++.|++  +||+.++....      .+..|...+.++.         +.+..|+.+.          ..+.. .
T Consensus       181 ~~~~~s~~~d~~v~~~d~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~  253 (433)
T 3bws_A          181 NELWVSQMQANAVHVFDLKTLAYKA------TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-I  253 (433)
T ss_dssp             TEEEEEEGGGTEEEEEETTTCCEEE------EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-C
T ss_pred             CEEEEEECCCCEEEEEECCCceEEE------EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-C
Confidence            468899999999  99997654432      2223333333221         2233455443          44444 3


Q ss_pred             cCeEEEEEcCCCCEEEEEe--------CCCCEEecC
Q psy75            64 RGVNWACFHPTLPLIVSGK--------GLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs--------~D~~iki~~   91 (120)
                      ..+.+++|+|+++.+++++        .|+.|++|+
T Consensus       254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d  289 (433)
T 3bws_A          254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYS  289 (433)
T ss_dssp             SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEE
T ss_pred             CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEE
Confidence            4599999999999888887        478899665

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=97.70  E-value=0.00026  Score=53.86  Aligned_cols=80  Identities=6%  Similarity=-0.072  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCC------Cc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCC---eeE--------
Q psy75             4 IFRLVLSSTPD------HH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADA---VVK--------   56 (120)
Q Consensus         4 ~~~~L~S~s~D------~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~---~v~--------   56 (120)
                      +...|+.++.+      ++  +||+++....       .+.+|...+.++.+        +.+.|+   .+.        
T Consensus       142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~-------~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~  214 (415)
T 2hqs_A          142 FRTRIAYVVQTNGGQFPYELRVSDYDGYNQF-------VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA  214 (415)
T ss_dssp             TTCEEEEEEECSSSSCCEEEEEEETTSCSCE-------EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred             CCCEEEEEEecCCCCccceEEEEcCCCCCCE-------EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc
Confidence            36677777764      45  9999753322       34455544444332        222232   332        


Q ss_pred             -EeccccccCeEEEEEcCCCCEEE-EEeCCCC--EEec
Q psy75            57 -HVLEGHDRGVNWACFHPTLPLIV-SGKGLCL--LDHG   90 (120)
Q Consensus        57 -~~l~gH~~~V~~v~fsp~~~~la-Sgs~D~~--iki~   90 (120)
                       ..+.+|...+.+++|||||+.|+ +++.|+.  |++|
T Consensus       215 ~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~  252 (415)
T 2hqs_A          215 VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM  252 (415)
T ss_dssp             EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEE
Confidence             35567888999999999999776 7777765  6643

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=97.70  E-value=0.00039  Score=51.18  Aligned_cols=86  Identities=3%  Similarity=-0.101  Sum_probs=49.2

Q ss_pred             CCEE-EEEcCCCc--eEecCCCceeeccCCcceEee-ccCCCc-eEEEeccCCCeeE----------EeccccccCeEEE
Q psy75             5 FRLV-LSSTPDHH--HKQNAQLRKKNVAPGMGGLEE-HLRNPS-STDLFGQADAVVK----------HVLEGHDRGVNWA   69 (120)
Q Consensus         5 ~~~L-~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~-h~~~v~-~~~~~~~~D~~v~----------~~l~gH~~~V~~v   69 (120)
                      +++| ++++.|++  +||+.++......+....... ...... .+.+.+..|+.+.          ..+ .|...+.++
T Consensus       127 g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~  205 (391)
T 1l0q_A          127 GKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV-KVEAAPSGI  205 (391)
T ss_dssp             SSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-ECSSEEEEE
T ss_pred             CCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE-ecCCCccce
Confidence            3445 78888998  999976544322111100000 000011 1223334455443          333 356689999


Q ss_pred             EEcCCCCEEEEEe---CCCCEEecC
Q psy75            70 CFHPTLPLIVSGK---GLCLLDHGP   91 (120)
Q Consensus        70 ~fsp~~~~laSgs---~D~~iki~~   91 (120)
                      +|+|+++.|++++   .|+.|++|+
T Consensus       206 ~~~~~g~~l~~~~~~~~~~~v~~~d  230 (391)
T 1l0q_A          206 AVNPEGTKAYVTNVDKYFNTVSMID  230 (391)
T ss_dssp             EECTTSSEEEEEEECSSCCEEEEEE
T ss_pred             EECCCCCEEEEEecCcCCCcEEEEE
Confidence            9999999888877   688999554

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=97.70  E-value=0.00035  Score=53.19  Aligned_cols=77  Identities=5%  Similarity=-0.097  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCC---c--eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCCe--eE---------Eec
Q psy75             5 FRLVLSSTPDH---H--HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAV--VK---------HVL   59 (120)
Q Consensus         5 ~~~L~S~s~D~---t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~--v~---------~~l   59 (120)
                      +++|++++.|+   +  +||+.+++...       +..|...+.+         +.+.++.|+.  +.         ..+
T Consensus       190 g~~la~~s~~~~~~~i~~~d~~tg~~~~-------l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l  262 (415)
T 2hqs_A          190 GSKLAYVTFESGRSALVIQTLANGAVRQ-------VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV  262 (415)
T ss_dssp             SSEEEEEECTTSSCEEEEEETTTCCEEE-------EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEC
T ss_pred             CCEEEEEEecCCCcEEEEEECCCCcEEE-------eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeC
Confidence            57899999885   4  99998755432       2222222222         2223332322  21         566


Q ss_pred             cccccCeEEEEEcCCCCEEEEEeC-CCCEE
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKG-LCLLD   88 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~-D~~ik   88 (120)
                      .+|...+.+++|+|||+.|+.++. ++..+
T Consensus       263 ~~~~~~~~~~~~spdg~~l~~~s~~~g~~~  292 (415)
T 2hqs_A          263 TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQ  292 (415)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred             cCCCCcccceEECCCCCEEEEEECCCCCcE
Confidence            788899999999999998888876 45433

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=97.59  E-value=0.00012  Score=57.39  Aligned_cols=35  Identities=11%  Similarity=0.079  Sum_probs=29.0

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCC--CEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLC--LLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~--~iki~~   91 (120)
                      ..+.+|...+..++|||||+.|++++.|+  .|++|+
T Consensus       188 ~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d  224 (582)
T 3o4h_A          188 RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVD  224 (582)
T ss_dssp             EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEEC
T ss_pred             eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEc
Confidence            46678888999999999999999888888  676443

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=97.56  E-value=8e-05  Score=57.43  Aligned_cols=34  Identities=12%  Similarity=-0.036  Sum_probs=29.6

Q ss_pred             eccccccCeEEEEEcCC-CCEEEEEeCCCCEEecC
Q psy75            58 VLEGHDRGVNWACFHPT-LPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~-~~~laSgs~D~~iki~~   91 (120)
                      .+.+|...|++++|||+ +.+|+||+.|++|++|+
T Consensus       144 ~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD  178 (434)
T 2oit_A          144 LLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQ  178 (434)
T ss_dssp             CCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred             ccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEE
Confidence            44579999999999998 78999999999999543

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=97.19  E-value=0.0011  Score=52.59  Aligned_cols=44  Identities=16%  Similarity=0.084  Sum_probs=36.0

Q ss_pred             CeeEEeccccccCeEEEEEcCCCCEEEEEe-------CCCCEEecCCCCceEeeCCCCc
Q psy75            53 AVVKHVLEGHDRGVNWACFHPTLPLIVSGK-------GLCLLDHGPNLFPVVLDSSDFF  104 (120)
Q Consensus        53 ~~v~~~l~gH~~~V~~v~fsp~~~~laSgs-------~D~~iki~~~~~~~~~~~~~~~  104 (120)
                      ..+.+++.+|...+..|+|||+++.|.+++       .+++|.        +||..+..
T Consensus       410 ~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~--------v~d~~~~~  460 (543)
T 1nir_A          410 WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA--------VFDLKNLD  460 (543)
T ss_dssp             TSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEE--------EEETTCTT
T ss_pred             CeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEE--------EEECCCCC
Confidence            566788889999999999999999999887       267999        67765543

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=97.02  E-value=0.0026  Score=50.98  Aligned_cols=33  Identities=15%  Similarity=-0.127  Sum_probs=26.7

Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .+..|...+..++|||||+.||.++. +.|++|+
T Consensus       146 ~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d  178 (741)
T 2ecf_A          146 QLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVID  178 (741)
T ss_dssp             BCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEE
T ss_pred             EcccCCcccccccCCCCCCEEEEEeC-CcEEEEe
Confidence            45567788999999999999999884 5788654

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=96.96  E-value=0.0063  Score=48.21  Aligned_cols=82  Identities=5%  Similarity=-0.089  Sum_probs=48.7

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeecc---CCC----------ceEEEecc--CCCeeEEeccccccCeEE
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHL---RNP----------SSTDLFGQ--ADAVVKHVLEGHDRGVNW   68 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~---~~v----------~~~~~~~~--~D~~v~~~l~gH~~~V~~   68 (120)
                      .++++++.|++  +||..+++.....+....  .|.   ...          ..+.++..  ..+.+..++. +...+..
T Consensus       150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~  226 (543)
T 1nir_A          150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARS  226 (543)
T ss_dssp             EEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEE
T ss_pred             EEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcce
Confidence            57889999998  999987655432221000  010   000          11222322  2233334444 4556799


Q ss_pred             EEEcC----CCCEEEEEe-CCCCEEec
Q psy75            69 ACFHP----TLPLIVSGK-GLCLLDHG   90 (120)
Q Consensus        69 v~fsp----~~~~laSgs-~D~~iki~   90 (120)
                      ++|||    +|+++++++ .|++|.+|
T Consensus       227 va~sp~~~~dg~~l~v~~~~~~~v~v~  253 (543)
T 1nir_A          227 VESSKFKGYEDRYTIAGAYWPPQFAIM  253 (543)
T ss_dssp             EEECCSTTCTTTEEEEEEEESSEEEEE
T ss_pred             EEeCCCcCCCCCEEEEEEccCCeEEEE
Confidence            99999    999888887 48999955

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=96.94  E-value=0.0036  Score=48.22  Aligned_cols=76  Identities=7%  Similarity=-0.157  Sum_probs=47.2

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE-Ee-----ccccccCeEEEEE
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK-HV-----LEGHDRGVNWACF   71 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~-~~-----l~gH~~~V~~v~f   71 (120)
                      ++|+.+ .++.  +||+.+.....      .+..|...++++      .+..+.|+++. ..     ...+...|.+++|
T Consensus        98 ~~L~v~-~~~~l~v~dv~sl~~~~------~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~~~~~Vs~v~W  170 (388)
T 1xip_A           98 DQVLVS-TRNALYSLDLEELSEFR------TVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDV  170 (388)
T ss_dssp             TEEEEE-ESSEEEEEESSSTTCEE------EEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEESEEEEEE
T ss_pred             CEEEEE-cCCcEEEEEchhhhccC------ccceeecceeeEEecCCCEEEEECCCCEEEEEccCCccccccCCceEEEE
Confidence            567777 6667  99997643221      122233333222      22234566664 11     2235678999999


Q ss_pred             cCCCCEEEEEeCCCCEEec
Q psy75            72 HPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        72 sp~~~~laSgs~D~~iki~   90 (120)
                      ||+|  ++.|..|+++++|
T Consensus       171 SpkG--~~vg~~dg~i~~~  187 (388)
T 1xip_A          171 TNSQ--LAVLLKDRSFQSF  187 (388)
T ss_dssp             CSSE--EEEEETTSCEEEE
T ss_pred             cCCc--eEEEEcCCcEEEE
Confidence            9999  6789999999976

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=96.88  E-value=0.0011  Score=52.00  Aligned_cols=34  Identities=15%  Similarity=-0.096  Sum_probs=29.1

Q ss_pred             eccccccCeEEEE--------EcCCCCEEEEEeCCCCEEecC
Q psy75            58 VLEGHDRGVNWAC--------FHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        58 ~l~gH~~~V~~v~--------fsp~~~~laSgs~D~~iki~~   91 (120)
                      .+.+|...+..++        |+|||.++++++.|+++++|.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~  273 (582)
T 3o4h_A          232 DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI  273 (582)
T ss_dssp             ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred             EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEE
Confidence            5667877787778        999999999999999999765

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=96.81  E-value=0.0067  Score=41.87  Aligned_cols=28  Identities=11%  Similarity=-0.092  Sum_probs=23.7

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGL   84 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D   84 (120)
                      ..+..|...+.+++|+|+++.|+.++.|
T Consensus       210 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~  237 (297)
T 2ojh_A          210 ERITDSAYGDWFPHPSPSGDKVVFVSYD  237 (297)
T ss_dssp             EECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred             EEEecCCcccCCeEECCCCCEEEEEEcC
Confidence            5566788889999999999998888766

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=96.79  E-value=0.0077  Score=50.79  Aligned_cols=82  Identities=4%  Similarity=-0.099  Sum_probs=52.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCC----------Cee---------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQAD----------AVV---------   55 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D----------~~v---------   55 (120)
                      +++|++++.|++  +||+.++.....      +.+|...+..+.+        +.+.+          ..+         
T Consensus       390 G~~la~~~~~~~v~~~d~~tg~~~~~------~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~  463 (1045)
T 1k32_A          390 GKFAVVANDRFEIMTVDLETGKPTVI------ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK  463 (1045)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEE------EECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred             CCEEEEECCCCeEEEEECCCCceEEe------ccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence            578999999988  999987554322      1123322222111        11111          122         


Q ss_pred             EEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            56 KHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        56 ~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ...+.+|...+.+++|+|||+.|+.++.++..+.|..
T Consensus       464 ~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~  500 (1045)
T 1k32_A          464 IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR  500 (1045)
T ss_dssp             EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred             EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence            2556788888999999999999999998877766553

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=96.62  E-value=0.038  Score=37.98  Aligned_cols=34  Identities=9%  Similarity=-0.082  Sum_probs=26.6

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEe-CCCCEEec
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGK-GLCLLDHG   90 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs-~D~~iki~   90 (120)
                      ..+..|...+.+++|+|+++.|+.++ .|+.+++|
T Consensus       166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~  200 (297)
T 2ojh_A          166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIW  200 (297)
T ss_dssp             EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred             eEcccCCCccccceECCCCCEEEEEecCCCCccEE
Confidence            45567888999999999999776655 58888754

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=96.60  E-value=0.0042  Score=50.44  Aligned_cols=34  Identities=9%  Similarity=-0.035  Sum_probs=28.0

Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .+.+|...+..++|||||+.||.++ |+.|.+|+-
T Consensus       106 ~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~  139 (740)
T 4a5s_A          106 TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIE  139 (740)
T ss_dssp             CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESS
T ss_pred             EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEEC
Confidence            4567788899999999999999886 678887653

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=96.59  E-value=0.012  Score=41.97  Aligned_cols=21  Identities=10%  Similarity=-0.010  Sum_probs=17.4

Q ss_pred             cCeEEEEEcCCCCEEEEEeCC
Q psy75            64 RGVNWACFHPTLPLIVSGKGL   84 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D   84 (120)
                      ..+..++|+|+|+.|++++.+
T Consensus        92 ~~~~~~~~spdg~~l~~~~~~  112 (349)
T 1jmx_B           92 RSMYSFAISPDGKEVYATVNP  112 (349)
T ss_dssp             ECSSCEEECTTSSEEEEEEEE
T ss_pred             ccccceEECCCCCEEEEEccc
Confidence            347899999999988888755

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=96.52  E-value=0.0096  Score=47.43  Aligned_cols=19  Identities=5%  Similarity=-0.230  Sum_probs=16.5

Q ss_pred             EEEEEcCCCCEEEEEeCCC
Q psy75            67 NWACFHPTLPLIVSGKGLC   85 (120)
Q Consensus        67 ~~v~fsp~~~~laSgs~D~   85 (120)
                      .+++|||||+.|++++.|+
T Consensus       176 ~~~~~SpDg~~la~~~~~~  194 (723)
T 1xfd_A          176 IAHWWSPDGTRLAYAAIND  194 (723)
T ss_dssp             EEEEECTTSSEEEEEEEEC
T ss_pred             ceEEECCCCCEEEEEEECC
Confidence            7899999999999888653

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=96.33  E-value=0.018  Score=40.73  Aligned_cols=27  Identities=7%  Similarity=-0.141  Sum_probs=21.4

Q ss_pred             CeEEEEEcCCCCEEEEEe------------CCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGK------------GLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs------------~D~~iki~~   91 (120)
                      .+..++|+|+++.++.++            .|+.|.+|+
T Consensus        83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d  121 (337)
T 1pby_B           83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD  121 (337)
T ss_dssp             CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred             cccceEECCCCCEEEEEecccccccccccccCceEEEEE
Confidence            678899999998877775            568888654

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=96.19  E-value=0.026  Score=40.21  Aligned_cols=85  Identities=8%  Similarity=-0.066  Sum_probs=44.8

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeec-cCCCce-----------EEEeccCCCee-EEeccccccCeEEEEE
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEH-LRNPSS-----------TDLFGQADAVV-KHVLEGHDRGVNWACF   71 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h-~~~v~~-----------~~~~~~~D~~v-~~~l~gH~~~V~~v~f   71 (120)
                      ++++++.+++  +||+.+++.....+.......- ......           +..+....+.+ ...+..+.....+++|
T Consensus        12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~   91 (331)
T 3u4y_A           12 GIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI   91 (331)
T ss_dssp             EEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE
T ss_pred             EEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE
Confidence            5788888888  9999875543321111000000 000011           11122222333 3445555656666999


Q ss_pred             cCCCCEEEEEeCCC---CEEecC
Q psy75            72 HPTLPLIVSGKGLC---LLDHGP   91 (120)
Q Consensus        72 sp~~~~laSgs~D~---~iki~~   91 (120)
                      +|+++.++++..++   .|.+|+
T Consensus        92 s~dg~~l~~~~~~~~~~~i~v~d  114 (331)
T 3u4y_A           92 TPDDQFAVTVTGLNHPFNMQSYS  114 (331)
T ss_dssp             CTTSSEEEECCCSSSSCEEEEEE
T ss_pred             CCCCCEEEEecCCCCcccEEEEE
Confidence            99999888555553   788654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=96.14  E-value=0.041  Score=39.00  Aligned_cols=27  Identities=4%  Similarity=-0.033  Sum_probs=21.2

Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGK-GLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs-~D~~iki~~   91 (120)
                      .+..++|+|+++.|+.++ .++.|.+|+
T Consensus        85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d  112 (343)
T 1ri6_A           85 SLTHISTDHQGQFVFVGSYNAGNVSVTR  112 (343)
T ss_dssp             CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence            788999999999765555 578898654

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=96.10  E-value=0.037  Score=46.64  Aligned_cols=34  Identities=9%  Similarity=-0.159  Sum_probs=29.5

Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .+.+|...+..++|||||+.|++++.|+.|++|+
T Consensus       373 ~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d  406 (1045)
T 1k32_A          373 KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVD  406 (1045)
T ss_dssp             ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             EecCCccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence            3447888999999999999999999999999654

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=96.08  E-value=0.067  Score=38.16  Aligned_cols=38  Identities=5%  Similarity=-0.115  Sum_probs=29.2

Q ss_pred             eeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            54 VVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        54 ~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .+...+..+...+..++|+|+++.++.++.|+.|.+|+
T Consensus       175 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d  212 (353)
T 3vgz_A          175 KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITID  212 (353)
T ss_dssp             EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEE
T ss_pred             ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEE
Confidence            33355555666788999999999988888898888654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=95.97  E-value=0.1  Score=37.88  Aligned_cols=40  Identities=5%  Similarity=-0.159  Sum_probs=31.8

Q ss_pred             CCCeeEEec---cccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            51 ADAVVKHVL---EGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        51 ~D~~v~~~l---~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      .++.+..++   .+|......++++|+|.++++.+.+++|++|
T Consensus       276 ~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~  318 (329)
T 3fvz_A          276 SSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKF  318 (329)
T ss_dssp             TTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEE
T ss_pred             CCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEE
Confidence            345555555   3677889999999999999999999999944

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=95.96  E-value=0.16  Score=36.01  Aligned_cols=29  Identities=10%  Similarity=-0.024  Sum_probs=21.6

Q ss_pred             ccCeEEEEEcCCCC-EEEEEeCCCC-EEecC
Q psy75            63 DRGVNWACFHPTLP-LIVSGKGLCL-LDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~-~laSgs~D~~-iki~~   91 (120)
                      .....+++|+|+|+ +++++..++. |.+|+
T Consensus       127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~  157 (331)
T 3u4y_A          127 PYDAVGIAISPNGNGLILIDRSSANTVRRFK  157 (331)
T ss_dssp             CTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred             CCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence            44568999999997 5666677688 88544

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=95.86  E-value=0.016  Score=46.34  Aligned_cols=39  Identities=8%  Similarity=-0.118  Sum_probs=28.4

Q ss_pred             CCeeEEecccccc----CeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            52 DAVVKHVLEGHDR----GVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        52 D~~v~~~l~gH~~----~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      ++.++..+..|..    .+..++|+|||+++++++.|++++||
T Consensus       321 ~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~  363 (741)
T 2ecf_A          321 SNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLY  363 (741)
T ss_dssp             TCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEE
T ss_pred             CCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEE
Confidence            4444455555543    45789999999999999999877765

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=95.70  E-value=0.041  Score=38.98  Aligned_cols=29  Identities=10%  Similarity=-0.161  Sum_probs=22.6

Q ss_pred             ccCeEEEEEcCCCCEEEEEe-CCCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGK-GLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs-~D~~iki~~   91 (120)
                      ...+.+++|+|+++.+++++ .|+.|.+|+
T Consensus       128 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d  157 (343)
T 1ri6_A          128 LDGCHSANISPDNRTLWVPALKQDRICLFT  157 (343)
T ss_dssp             CTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred             CCCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence            34588999999998766666 788888654

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=95.52  E-value=0.025  Score=45.20  Aligned_cols=28  Identities=11%  Similarity=0.151  Sum_probs=23.7

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ..+..++|||||+.||.++ |++|++|+-
T Consensus       110 ~~~~~~~~SPDG~~la~~~-~~~i~~~~~  137 (719)
T 1z68_A          110 RPIQYLCWSPVGSKLAYVY-QNNIYLKQR  137 (719)
T ss_dssp             SSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred             cccccceECCCCCEEEEEE-CCeEEEEeC
Confidence            4688999999999999886 779998754

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=95.39  E-value=0.083  Score=41.67  Aligned_cols=35  Identities=20%  Similarity=0.267  Sum_probs=26.8

Q ss_pred             eeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEE
Q psy75            54 VVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLD   88 (120)
Q Consensus        54 ~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~ik   88 (120)
                      ..+....+|...+..++|+|||+++++++.|++.+
T Consensus       232 ~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~  266 (662)
T 3azo_A          232 DTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWN  266 (662)
T ss_dssp             EEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCE
T ss_pred             ccEEeCCCCCceEcceEECCCCeEEEEECCCCCeE
Confidence            34444456678999999999999888888888444

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=95.26  E-value=0.15  Score=36.33  Aligned_cols=26  Identities=12%  Similarity=-0.022  Sum_probs=19.9

Q ss_pred             EEEEEcCCCC-EEEEEeCCCCEEecCC
Q psy75            67 NWACFHPTLP-LIVSGKGLCLLDHGPN   92 (120)
Q Consensus        67 ~~v~fsp~~~-~laSgs~D~~iki~~~   92 (120)
                      ..++|+|+++ ++++...+++|.+|+-
T Consensus       275 ~~~~~s~dg~~l~v~~~~~~~v~~~d~  301 (353)
T 3vgz_A          275 LAVLFNPARNEAYVTHRQAGKVSVIDA  301 (353)
T ss_dssp             CCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             ceEEECCCCCEEEEEECCCCeEEEEEC
Confidence            5699999998 5666667899996543

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=95.18  E-value=0.19  Score=36.09  Aligned_cols=34  Identities=9%  Similarity=-0.156  Sum_probs=26.1

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeC-CCCEEec
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKG-LCLLDHG   90 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~-D~~iki~   90 (120)
                      ..+..|...+..++|+|+|+.|++++. ++++.+|
T Consensus       279 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~  313 (347)
T 3hfq_A          279 QQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLY  313 (347)
T ss_dssp             EEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             EEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence            444556667899999999997777665 5889977

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=95.03  E-value=0.23  Score=34.69  Aligned_cols=33  Identities=9%  Similarity=-0.124  Sum_probs=24.1

Q ss_pred             Eeccccc--cCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            57 HVLEGHD--RGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        57 ~~l~gH~--~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      ..+..+.  ..+..++++|+|+++++ +.|++|++|
T Consensus       242 ~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~  276 (286)
T 1q7f_A          242 SALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIY  276 (286)
T ss_dssp             EEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEE
T ss_pred             EEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEE
Confidence            4444433  34779999999998888 568999955

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=94.98  E-value=0.42  Score=34.20  Aligned_cols=86  Identities=10%  Similarity=-0.082  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeecc---CCCceEEEecc-------CCCeeEEecccc-ccCeEEEEE
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHL---RNPSSTDLFGQ-------ADAVVKHVLEGH-DRGVNWACF   71 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~---~~v~~~~~~~~-------~D~~v~~~l~gH-~~~V~~v~f   71 (120)
                      .++|++++.|+.  +||.++++.....+.......|.   ..-..+.++..       .++.++..+..+ ...+.++.+
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~   84 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARI   84 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEEEEEE
T ss_pred             CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCccccccEE
Confidence            468999999998  99986665543221110000000   00001122111       145555666544 357899999


Q ss_pred             cCCCCEEEEEeC-CCCEEec
Q psy75            72 HPTLPLIVSGKG-LCLLDHG   90 (120)
Q Consensus        72 sp~~~~laSgs~-D~~iki~   90 (120)
                      .|+|+++++.+. ++.+..+
T Consensus        85 ~~dG~~lv~~~~~~~~v~~v  104 (276)
T 3no2_A           85 LPDGNALVAWCGHPSTILEV  104 (276)
T ss_dssp             CTTSCEEEEEESTTEEEEEE
T ss_pred             CCCCCEEEEecCCCCEEEEE
Confidence            999999998887 5555544

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=94.87  E-value=0.19  Score=39.84  Aligned_cols=30  Identities=10%  Similarity=0.020  Sum_probs=22.1

Q ss_pred             cccCeEEEEEcCCCCEEEEEeC-C---CCEEecC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKG-L---CLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~-D---~~iki~~   91 (120)
                      |...+.+++|||||+.|+..+. +   ..|.+|+
T Consensus       399 ~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d  432 (706)
T 2z3z_A          399 PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN  432 (706)
T ss_dssp             CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred             CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence            6778999999999997766543 3   3477653

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=94.86  E-value=0.11  Score=41.27  Aligned_cols=31  Identities=3%  Similarity=-0.027  Sum_probs=25.0

Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCC-----CEEecC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLC-----LLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~-----~iki~~   91 (120)
                      +|...+.+++|+|||+.|++++.|+     +|.+|+
T Consensus       255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d  290 (706)
T 2z3z_A          255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYD  290 (706)
T ss_dssp             CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEE
T ss_pred             CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEE
Confidence            5677899999999999988887775     676554

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=94.36  E-value=0.52  Score=33.99  Aligned_cols=28  Identities=4%  Similarity=-0.140  Sum_probs=22.0

Q ss_pred             ccCeEEEEEcCCCCEEEEEe-CCCCEEec
Q psy75            63 DRGVNWACFHPTLPLIVSGK-GLCLLDHG   90 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs-~D~~iki~   90 (120)
                      ...+..++|+|+|++|+.++ .+++|.+|
T Consensus       305 g~~~~~~~~spdg~~l~~~~~~~~~v~v~  333 (361)
T 3scy_A          305 GIHPRNFIITPNGKYLLVACRDTNVIQIF  333 (361)
T ss_dssp             SSCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred             CCCCceEEECCCCCEEEEEECCCCCEEEE
Confidence            44678999999999777776 67888863

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=93.57  E-value=0.27  Score=36.38  Aligned_cols=37  Identities=11%  Similarity=0.072  Sum_probs=28.9

Q ss_pred             ccCCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEE
Q psy75            49 GQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLD   88 (120)
Q Consensus        49 ~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~ik   88 (120)
                      ....+++..++..+.  ...++|+|||++|++++. ++|.
T Consensus       292 D~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~  328 (361)
T 2oiz_A          292 DTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVN  328 (361)
T ss_dssp             ETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEE
T ss_pred             ECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEE
Confidence            333455556777666  999999999999888886 8999

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=93.55  E-value=0.075  Score=43.04  Aligned_cols=23  Identities=4%  Similarity=-0.165  Sum_probs=18.0

Q ss_pred             EEEEcCCCCEEEEEeCCCC-EEec
Q psy75            68 WACFHPTLPLIVSGKGLCL-LDHG   90 (120)
Q Consensus        68 ~v~fsp~~~~laSgs~D~~-iki~   90 (120)
                      .++|||||+.||.++.|.+ +++|
T Consensus       175 ~~~wSpDg~~la~~~~d~~~v~~~  198 (740)
T 4a5s_A          175 ALWWSPNGTFLAYAQFNDTEVPLI  198 (740)
T ss_dssp             CEEECTTSSEEEEEEEECTTCCEE
T ss_pred             ceEECCCCCEEEEEEEcccCCceE
Confidence            4899999999999886654 5543

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=93.48  E-value=1.2  Score=32.12  Aligned_cols=30  Identities=7%  Similarity=-0.119  Sum_probs=21.9

Q ss_pred             ccccCeEEEEEcCCCCEEEEE-eC-CCCEEec
Q psy75            61 GHDRGVNWACFHPTLPLIVSG-KG-LCLLDHG   90 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSg-s~-D~~iki~   90 (120)
                      .+......++|+|||+.|+.+ .. +++|.+|
T Consensus       256 ~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~  287 (361)
T 3scy_A          256 VNAQGSGDIHLSPDGKYLYASNRLKADGVAIF  287 (361)
T ss_dssp             SCCCCEEEEEECTTSSEEEEEECSSSCEEEEE
T ss_pred             CCCCCcccEEECCCCCEEEEECCCCCCEEEEE
Confidence            344567899999999976544 44 5888864

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=93.34  E-value=0.085  Score=41.91  Aligned_cols=34  Identities=9%  Similarity=-0.008  Sum_probs=24.9

Q ss_pred             CeeEEecccccc---CeEEEEEcCCCCEEEEEeCCCC
Q psy75            53 AVVKHVLEGHDR---GVNWACFHPTLPLIVSGKGLCL   86 (120)
Q Consensus        53 ~~v~~~l~gH~~---~V~~v~fsp~~~~laSgs~D~~   86 (120)
                      +..+..+.+|..   .|.+++|||||+.|++++.|+.
T Consensus        47 g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~   83 (723)
T 1xfd_A           47 NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEP   83 (723)
T ss_dssp             CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC
T ss_pred             CcEEEEeccccccccccceEEECCCCCEEEEEecCcc
Confidence            333445555554   4999999999999999987643

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=93.29  E-value=0.044  Score=43.78  Aligned_cols=27  Identities=4%  Similarity=-0.119  Sum_probs=23.0

Q ss_pred             CeEEEEEcCCCCEEEEEeC---------CCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKG---------LCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~---------D~~iki~~   91 (120)
                      .|.+++|||||+.|++++.         |++|++|+
T Consensus        61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d   96 (719)
T 1z68_A           61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD   96 (719)
T ss_dssp             TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence            4899999999999998876         67888764

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=92.91  E-value=0.31  Score=34.21  Aligned_cols=27  Identities=11%  Similarity=-0.127  Sum_probs=23.1

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      ..+.+++|+|+++.|++++.|+.|++|
T Consensus       280 ~~~~~~~~s~dg~~l~~~~~~~~i~v~  306 (337)
T 1pby_B          280 HSYYSVNVSTDGSTVWLGGALGDLAAY  306 (337)
T ss_dssp             SCCCEEEECTTSCEEEEESBSSEEEEE
T ss_pred             CceeeEEECCCCCEEEEEcCCCcEEEE
Confidence            467899999999988888889999944

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=92.87  E-value=0.31  Score=39.08  Aligned_cols=31  Identities=3%  Similarity=-0.291  Sum_probs=23.1

Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCC----CEEecC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLC----LLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~----~iki~~   91 (120)
                      +|...+..++|||||+.|+.++.++    .|.+++
T Consensus       224 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~  258 (695)
T 2bkl_A          224 GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKR  258 (695)
T ss_dssp             CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEEC
T ss_pred             CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEc
Confidence            4556789999999999887777665    455543

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=92.78  E-value=0.36  Score=35.33  Aligned_cols=30  Identities=20%  Similarity=0.205  Sum_probs=20.7

Q ss_pred             cccCeEEEEEcCCCCEEEEEe-CCCCEEecC
Q psy75            62 HDRGVNWACFHPTLPLIVSGK-GLCLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs-~D~~iki~~   91 (120)
                      +...+.+++|+|||+.|+++. .++.|++|+
T Consensus       143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~  173 (365)
T 1jof_A          143 ENTGIHGMVFDPTETYLYSADLTANKLWTHR  173 (365)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCCcceEEEECCCCCEEEEEcCCCCEEEEEE
Confidence            456788888999888766554 356777543

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=92.57  E-value=1.8  Score=29.99  Aligned_cols=31  Identities=3%  Similarity=-0.204  Sum_probs=26.1

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCC-CEEecCC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLC-LLDHGPN   92 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~-~iki~~~   92 (120)
                      +......++++|+|.++++.+.++ .|.+|+.
T Consensus       205 ~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~  236 (286)
T 1q7f_A          205 ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ  236 (286)
T ss_dssp             TSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred             ccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence            346789999999999999998886 8998765

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=92.26  E-value=0.29  Score=34.63  Aligned_cols=27  Identities=11%  Similarity=-0.084  Sum_probs=22.2

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      ..+.+++|+|+++.|++++.++.|++|
T Consensus       295 ~~~~~~~~s~dg~~l~~~~~~~~v~v~  321 (349)
T 1jmx_B          295 HTYYCVAFDKKGDKLYLGGTFNDLAVF  321 (349)
T ss_dssp             SCCCEEEECSSSSCEEEESBSSEEEEE
T ss_pred             CCccceEECCCCCEEEEecCCCeEEEE
Confidence            457899999999887778888999943

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=92.24  E-value=0.41  Score=34.66  Aligned_cols=27  Identities=7%  Similarity=0.068  Sum_probs=20.9

Q ss_pred             eccccccCeEEEEEcC-CCCEEEEEeCC
Q psy75            58 VLEGHDRGVNWACFHP-TLPLIVSGKGL   84 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp-~~~~laSgs~D   84 (120)
                      .+..+...+..++||| ||+.|+.++.+
T Consensus       182 ~l~~~~~~~~~~~~sp~dg~~l~~~~~~  209 (388)
T 3pe7_A          182 VILQENQWLGHPIYRPYDDSTVAFCHEG  209 (388)
T ss_dssp             EEEEESSCEEEEEEETTEEEEEEEEECS
T ss_pred             EeecCCccccccEECCCCCCEEEEEEec
Confidence            3445677789999999 99988877753

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=92.07  E-value=0.18  Score=36.22  Aligned_cols=34  Identities=6%  Similarity=-0.032  Sum_probs=26.8

Q ss_pred             eccccccCeEEEEEcCCCCEEEEEe-CCCCEEecC
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGK-GLCLLDHGP   91 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs-~D~~iki~~   91 (120)
                      .+..|...+..++|+|+++.|++++ .++++.+|+
T Consensus        80 ~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~  114 (347)
T 3hfq_A           80 TVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK  114 (347)
T ss_dssp             EEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             eeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence            3345777889999999999877777 678898664

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=91.95  E-value=0.31  Score=35.33  Aligned_cols=37  Identities=14%  Similarity=-0.015  Sum_probs=28.4

Q ss_pred             eEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            55 VKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        55 v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +++...+|...+..++|+||++.|+.++.++.|.+|+
T Consensus        72 ~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d  108 (388)
T 3pe7_A           72 ATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVD  108 (388)
T ss_dssp             EEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEE
T ss_pred             eEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEE
Confidence            3345556666666788999999999999888888654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=90.06  E-value=4  Score=29.25  Aligned_cols=32  Identities=16%  Similarity=-0.049  Sum_probs=25.5

Q ss_pred             ccccCeEEEEEcC-CCCEEEEEe-CCCCEEecCC
Q psy75            61 GHDRGVNWACFHP-TLPLIVSGK-GLCLLDHGPN   92 (120)
Q Consensus        61 gH~~~V~~v~fsp-~~~~laSgs-~D~~iki~~~   92 (120)
                      ++....+.++|+| ++.++++.+ .++.|++|+.
T Consensus       140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~  173 (329)
T 3fvz_A          140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP  173 (329)
T ss_dssp             TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT
T ss_pred             cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC
Confidence            4455788999999 789999987 6888887654

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=89.66  E-value=0.13  Score=41.36  Aligned_cols=31  Identities=3%  Similarity=-0.196  Sum_probs=24.8

Q ss_pred             ccccCeEEEEEcCCCCEEE-----EEeCCCCEEecC
Q psy75            61 GHDRGVNWACFHPTLPLIV-----SGKGLCLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~la-----Sgs~D~~iki~~   91 (120)
                      +|...+..++|||||++||     +|+.+.+|++|+
T Consensus       118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~d  153 (695)
T 2bkl_A          118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVID  153 (695)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEE
T ss_pred             CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEE
Confidence            5666799999999999888     566667888654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=89.33  E-value=3.7  Score=27.86  Aligned_cols=31  Identities=6%  Similarity=-0.131  Sum_probs=25.3

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +...+..++++|+|+++++.+.+++|+++.-
T Consensus       232 ~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~  262 (270)
T 1rwi_B          232 GLNTPLAVAVDSDRTVYVADRGNDRVVKLTS  262 (270)
T ss_dssp             SCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred             CCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence            4467889999999999999988999995443

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=88.28  E-value=2.9  Score=29.93  Aligned_cols=24  Identities=4%  Similarity=-0.078  Sum_probs=18.4

Q ss_pred             ccccCeEEEEEcC-CCCEEEEEeCC
Q psy75            61 GHDRGVNWACFHP-TLPLIVSGKGL   84 (120)
Q Consensus        61 gH~~~V~~v~fsp-~~~~laSgs~D   84 (120)
                      .+...+..++|+| ++..|+.++.+
T Consensus       185 ~~~~~~~~~~~sp~dg~~l~~~~~~  209 (396)
T 3c5m_A          185 QDTAWLGHPIYRPFDDSTVGFCHEG  209 (396)
T ss_dssp             EESSCEEEEEEETTEEEEEEEEECS
T ss_pred             cCCcccccceECCCCCCEEEEEecC
Confidence            5677899999999 78877666543

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=87.47  E-value=2.1  Score=32.72  Aligned_cols=75  Identities=5%  Similarity=-0.083  Sum_probs=42.1

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCee------------EEec------c---
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVV------------KHVL------E---   60 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v------------~~~l------~---   60 (120)
                      ...-+|.++.|++  +||+.........+...++.-+-.   . ...+..|+.+            +.++      .   
T Consensus       135 ~~p~~av~~~dG~L~v~dl~~~~~~~~~~~Vs~v~WSpk---G-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~  210 (388)
T 1xip_A          135 VNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNS---Q-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELP  210 (388)
T ss_dssp             CSSEEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSS---E-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSC
T ss_pred             cCCCEEEEECCCCEEEEEccCCccccccCCceEEEEcCC---c-eEEEEcCCcEEEEcCCCccccccceecCCccccccc
Confidence            3434888899999  999975433221111111111111   1 1223334433            2334      2   


Q ss_pred             ccccCeEEEEEcCCCCEEEEEe
Q psy75            61 GHDRGVNWACFHPTLPLIVSGK   82 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs   82 (120)
                      +|...|.+|.|.+++.++++-.
T Consensus       211 ~~~~~V~sI~wl~~~~flv~y~  232 (388)
T 1xip_A          211 VEEYSPLSVTILSPQDFLAVFG  232 (388)
T ss_dssp             TTTSEEEEEEESSSSEEEEEEE
T ss_pred             CCCeeEEEEEEecCCeEEEEEc
Confidence            4788999999999998888754

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=87.38  E-value=2.1  Score=34.32  Aligned_cols=22  Identities=5%  Similarity=-0.123  Sum_probs=17.5

Q ss_pred             cccCeEEEEEcCCCCEEEEEeC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKG   83 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~   83 (120)
                      |...+..++|||||+.|+.++.
T Consensus       231 ~~~~~~~~~~SpDg~~l~~~~~  252 (710)
T 2xdw_A          231 EPKWMGGAELSDDGRYVLLSIR  252 (710)
T ss_dssp             CTTCEEEEEECTTSCEEEEEEE
T ss_pred             CCeEEEEEEEcCCCCEEEEEEE
Confidence            4556789999999998777664

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=85.23  E-value=0.41  Score=37.63  Aligned_cols=41  Identities=10%  Similarity=-0.305  Sum_probs=27.2

Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSS  101 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~  101 (120)
                      .+...+..++|||||+.|+.++.++..+-|.....++||..
T Consensus       185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~  225 (662)
T 3azo_A          185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT  225 (662)
T ss_dssp             SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred             cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence            55567888999999999998887653333333334455543

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=83.82  E-value=1.6  Score=30.97  Aligned_cols=35  Identities=6%  Similarity=-0.218  Sum_probs=27.7

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..+.++...+.+++|+|++++++++..++.|.+|+
T Consensus        38 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d   72 (333)
T 2dg1_A           38 LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKIN   72 (333)
T ss_dssp             EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEEC
T ss_pred             EEEeccCccccCcEECCCCCEEEEECCCCEEEEEe
Confidence            45556677788999999999888888888888764

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=83.20  E-value=1.4  Score=32.03  Aligned_cols=29  Identities=14%  Similarity=0.080  Sum_probs=23.2

Q ss_pred             cccCeEEEEEcCCCCEEEEEeC-CCCEEec
Q psy75            62 HDRGVNWACFHPTLPLIVSGKG-LCLLDHG   90 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~-D~~iki~   90 (120)
                      |...+..++|+|+|+.++.++. +++|.+|
T Consensus       191 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~  220 (365)
T 1jof_A          191 PGDHPRWVAMHPTGNYLYALMEAGNRICEY  220 (365)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence            4567899999999998777664 6788865

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=83.15  E-value=4.3  Score=28.59  Aligned_cols=31  Identities=16%  Similarity=-0.049  Sum_probs=24.5

Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCC----CCEEecC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGL----CLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D----~~iki~~   91 (120)
                      .+...+.+++|+|+++++++...+    +.|.+|+
T Consensus        84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d  118 (333)
T 2dg1_A           84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT  118 (333)
T ss_dssp             CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred             CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence            466789999999999988887766    5676554

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=82.59  E-value=1.9  Score=30.08  Aligned_cols=35  Identities=20%  Similarity=0.167  Sum_probs=27.6

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..+..+...+..++|+|+|+++++.+.++.|.+|+
T Consensus        62 ~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d   96 (296)
T 3e5z_A           62 SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR   96 (296)
T ss_dssp             EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred             EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence            34455677899999999999988887777787665

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=82.04  E-value=3.4  Score=33.32  Aligned_cols=24  Identities=8%  Similarity=-0.148  Sum_probs=18.1

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLC   85 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~   85 (120)
                      |...+..+.|||||+.|+..+.++
T Consensus       266 ~~~~~~~~~~SpDG~~l~~~~~~~  289 (741)
T 1yr2_A          266 LPKRGHGASVSSDGRWVVITSSEG  289 (741)
T ss_dssp             CTTCEEEEEECTTSCEEEEEEECT
T ss_pred             CCeEEEEEEECCCCCEEEEEEEcc
Confidence            334588999999999877776543

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=82.03  E-value=2.4  Score=30.37  Aligned_cols=26  Identities=8%  Similarity=-0.273  Sum_probs=21.2

Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ...+.|+|||+.|+.++.++.|.+|+
T Consensus        83 ~~~~~~spdg~~l~~~~~~~~l~~~d  108 (396)
T 3c5m_A           83 TFGGFISTDERAFFYVKNELNLMKVD  108 (396)
T ss_dssp             TTTCEECTTSSEEEEEETTTEEEEEE
T ss_pred             cccceECCCCCEEEEEEcCCcEEEEE
Confidence            34488999999999999888888664

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=82.00  E-value=1.7  Score=30.46  Aligned_cols=32  Identities=22%  Similarity=0.047  Sum_probs=26.0

Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..+....+.++|+|+++.+++.+.++.|.+|+
T Consensus       168 ~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~  199 (296)
T 3e5z_A          168 IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYC  199 (296)
T ss_dssp             ECCCSSEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred             ecCCCCCccEEECCCCCEEEEeCCCCeEEEEE
Confidence            35566778999999999888888888888654

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=81.58  E-value=11  Score=26.50  Aligned_cols=48  Identities=4%  Similarity=-0.153  Sum_probs=34.5

Q ss_pred             ceEEEeccCCCeeEEeccccc-cCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            43 SSTDLFGQADAVVKHVLEGHD-RGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        43 ~~~~~~~~~D~~v~~~l~gH~-~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      ..+.++...++.++..+..+. ..+++++++|+|+++++  .++.|..++.
T Consensus        15 ~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~   63 (276)
T 3no2_A           15 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR   63 (276)
T ss_dssp             SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT
T ss_pred             CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC
Confidence            334555555777877777666 57999999999999984  4566665544

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=80.51  E-value=4.3  Score=32.30  Aligned_cols=44  Identities=11%  Similarity=0.003  Sum_probs=29.2

Q ss_pred             EEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            46 DLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        46 ~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      .++....+.+..++.. ...+..+.|||||+.+..++.|+.|.++
T Consensus       180 ~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~vi  223 (567)
T 1qks_A          180 ALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMI  223 (567)
T ss_dssp             EEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred             EEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEE
Confidence            3333334445445542 2356689999999998888888888843

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	120
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-04
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	0.001

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (81), Expect = 5e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 56 KHVLEGHDRGVNWACFHPTLPLIVSG 81
          K+ L GH   V    FHP   ++VS 
Sbjct: 10 KYALSGHRSPVTRVIFHPVFSVMVSA 35

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 34.7 bits (78), Expect = 0.001
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 43 SSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG 81
          ++ D  G+     +  L GH   +    +     L+VS 
Sbjct: 35 NNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSA 73

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	120
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.58
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.38
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.32
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.21
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.19
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.18
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.18
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.17
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.15
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.11
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.09
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.09
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.09
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.08
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.03
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	98.91
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	98.9
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	98.89
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	98.82
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	98.82
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	98.81
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	98.81
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	98.8
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	98.79
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	98.75
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	98.71
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	98.69
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	98.68
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	98.33
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.21
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.02
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	97.89
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	97.8
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	97.63
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	97.29
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	97.23
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	97.17
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	97.14
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	97.02
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	96.97
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	96.93
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	96.56
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	96.4
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	96.08
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	94.31
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	94.03
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	93.65
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	92.89
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	91.82
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	90.64

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=2.4e-15  Score=111.65  Aligned_cols=103  Identities=12%  Similarity=-0.017  Sum_probs=76.0

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEe--------ccCCCe---eE-----------------
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF--------GQADAV---VK-----------------   56 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~--------~~~D~~---v~-----------------   56 (120)
                      +|||||.|++  +||+.+++.....+....+.+|...|+++.++        ++.|++   ++                 
T Consensus       197 ~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~  276 (393)
T d1sq9a_         197 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPT  276 (393)
T ss_dssp             EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-
T ss_pred             EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeecccc
Confidence            8999999999  99998766544433334567788777775543        333432   21                 


Q ss_pred             ------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhhh
Q psy75            57 ------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRAR  118 (120)
Q Consensus        57 ------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
                            ..+.||...|++++|+|++++|+|||.|++|+        +||+.. -.++++|++|.+.++
T Consensus       277 ~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~--------vWd~~~-g~~~~~l~gH~~~v~  335 (393)
T d1sq9a_         277 HSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR--------FWDVKT-KERITTLNMHCDDIE  335 (393)
T ss_dssp             -------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE--------EEETTT-TEEEEEEECCGGGCS
T ss_pred             ccccceeeeecccCceeeeccCCCCCeeEEECCCCEEE--------EEECCC-CCEEEEECCcCCccc
Confidence                  12348999999999999999999999999999        888766 567999999987664

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=1.3e-12  Score=90.40  Aligned_cols=81  Identities=20%  Similarity=0.084  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +.++++|+.|++  +||+.+++...      .+.+|...+.++        .++++.|+.++          .++.+|..
T Consensus       217 ~~~~~~~~~d~~i~~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~  290 (317)
T d1vyhc1         217 GPFLLSGSRDKTIKMWDVSTGMCLM------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH  290 (317)
T ss_dssp             CCEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS
T ss_pred             CceeEeccCCCEEEEEECCCCcEEE------EEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCC
Confidence            467899999999  99998765432      345555555443        33455566654          77889999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|++++|+|++++|+||+.|++|+||+
T Consensus       291 ~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         291 FVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             CEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             CEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            999999999999999999999999875

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.32  E-value=4.2e-12  Score=89.43  Aligned_cols=83  Identities=14%  Similarity=0.011  Sum_probs=58.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCc--------eEEEeccCCCeeE----------Eecccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPS--------STDLFGQADAVVK----------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~--------~~~~~~~~D~~v~----------~~l~gH~~   64 (120)
                      +++|++|+.|++  +||+...........    ..+...+.        ...+.++.|+.++          .++.+|..
T Consensus       238 ~~~l~s~s~d~~i~~~~~~~~~~~~~~~~----~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~  313 (340)
T d1tbga_         238 GNAFATGSDDATCRLFDLRADQELMTYSH----DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN  313 (340)
T ss_dssp             SSEEEEEETTSCEEEEETTTTEEEEEECC----TTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred             CCEEEEEeCCCeEEEEeeccccccccccc----ccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCC
Confidence            568999999999  999976443321110    01111121        1234455555554          78889999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      .|++++|+|++++|||||.|++|++|+
T Consensus       314 ~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         314 RVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            999999999999999999999999875

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=4.9e-11  Score=82.25  Aligned_cols=98  Identities=26%  Similarity=0.150  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCc----------------------------eEEEeccCCCe
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPS----------------------------STDLFGQADAV   54 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~----------------------------~~~~~~~~D~~   54 (120)
                      +++|++++.|++  +|++.+.......      ..|...+.                            ...+.++.|+.
T Consensus       155 ~~~l~~~~~d~~v~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  228 (317)
T d1vyhc1         155 GTLIASCSNDQTVRVWVVATKECKAEL------REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT  228 (317)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCEEEEE------CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred             CCEEEEEeCCCeEEEEeeccceeeEEE------ecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCE
Confidence            578999999999  9998765433221      11111111                            02233445555


Q ss_pred             eE----------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            55 VK----------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        55 v~----------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      ++          .++.+|...|.+++|+|++++|++|+.|++|+        +||..+ ..++..|++|.+.+
T Consensus       229 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~--------iwd~~~-~~~~~~~~~h~~~V  292 (317)
T d1vyhc1         229 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR--------VWDYKN-KRCMKTLNAHEHFV  292 (317)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEE--------EECCTT-SCCCEEEECCSSCE
T ss_pred             EEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEE--------EEECCC-CcEEEEEcCCCCCE
Confidence            43          67889999999999999999999999999999        566555 45677787776654

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.19  E-value=4.5e-11  Score=86.30  Aligned_cols=78  Identities=15%  Similarity=0.060  Sum_probs=56.2

Q ss_pred             EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------E-------ec
Q psy75             7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------H-------VL   59 (120)
Q Consensus         7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~-------~l   59 (120)
                      +|+||+.|++  +||+.+.+...      .+..|...++++        .++++.|+.++          .       ..
T Consensus       161 ~l~sgs~d~~i~i~d~~~~~~~~------~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~  234 (311)
T d1nr0a1         161 RIISGSDDNTVAIFEGPPFKFKS------TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN  234 (311)
T ss_dssp             EEEEEETTSCEEEEETTTBEEEE------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSS
T ss_pred             eeccccccccccccccccccccc------ccccccccccccccCcccccccccccccccccccccccccccccccccccc
Confidence            5889999999  99998654432      233454444443        33445565554          2       23


Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      .+|...|++++|+|++++|+||+.|++|+||
T Consensus       235 ~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iw  265 (311)
T d1nr0a1         235 VAHSGSVFGLTWSPDGTKIASASADKTIKIW  265 (311)
T ss_dssp             CSSSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ccccccccccccCCCCCEEEEEeCCCeEEEE
Confidence            4799999999999999999999999999944

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.18  E-value=4.7e-11  Score=86.19  Aligned_cols=104  Identities=15%  Similarity=-0.004  Sum_probs=71.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccC-CcceEeeccCCCceEE--------EeccCCCeeE-----------------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAP-GMGGLEEHLRNPSSTD--------LFGQADAVVK-----------------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~-~~~~l~~h~~~v~~~~--------~~~~~D~~v~-----------------   56 (120)
                      +++|++|+.|++  +||+.++....... ......+|...+.++.        +.++.|+.++                 
T Consensus       217 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~  296 (388)
T d1erja_         217 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN  296 (388)
T ss_dssp             CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred             CCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCcccccccccc
Confidence            578999999999  99997654432211 1112334555555433        3444566553                 


Q ss_pred             -----EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            57 -----HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        57 -----~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                           .....|...|++++|+|++++|++|+.|++|+        +||.++ ..++..|++|.+.+
T Consensus       297 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~--------vwd~~~-~~~~~~l~~H~~~V  353 (388)
T d1erja_         297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVL--------FWDKKS-GNPLLMLQGHRNSV  353 (388)
T ss_dssp             --CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEE--------EEETTT-CCEEEEEECCSSCE
T ss_pred             ccceeeecccccceEEEEEECCCCCEEEEEeCCCEEE--------EEECCC-CcEEEEEeCCCCCE
Confidence                 33457899999999999999999999999999        667655 56677888876654

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.18  E-value=5.7e-11  Score=85.75  Aligned_cols=82  Identities=15%  Similarity=0.011  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEe--------ccC--CCee----------EEecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLF--------GQA--DAVV----------KHVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~--------~~~--D~~v----------~~~l~gH   62 (120)
                      +++||+|+.|++  +||+.+......    ..+..|...+.++.++        ++.  +..+          ..++.+|
T Consensus        70 g~~latg~~dg~i~iwd~~~~~~~~~----~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h  145 (311)
T d1nr0a1          70 GYYCASGDVHGNVRIWDTTQTTHILK----TTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQ  145 (311)
T ss_dssp             SSEEEEEETTSEEEEEESSSTTCCEE----EEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCC
T ss_pred             CCeEeccccCceEeeeeeeccccccc----cccccccCcccccccccccccccccccccccccccccccccccccccccc
Confidence            579999999999  999976432211    2355666666654332        221  2222          2677899


Q ss_pred             ccCeEEEEEcCCCC-EEEEEeCCCCEEec
Q psy75            63 DRGVNWACFHPTLP-LIVSGKGLCLLDHG   90 (120)
Q Consensus        63 ~~~V~~v~fsp~~~-~laSgs~D~~iki~   90 (120)
                      ...|++++|+|+++ .|+||+.|++|++|
T Consensus       146 ~~~v~~v~~~~~~~~~l~sgs~d~~i~i~  174 (311)
T d1nr0a1         146 ARAMNSVDFKPSRPFRIISGSDDNTVAIF  174 (311)
T ss_dssp             SSCEEEEEECSSSSCEEEEEETTSCEEEE
T ss_pred             ccccccccccccceeeecccccccccccc
Confidence            99999999999997 58999999999954

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.17  E-value=1e-10  Score=82.05  Aligned_cols=98  Identities=16%  Similarity=0.109  Sum_probs=72.1

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE------------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK------------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~------------~~l~gH   62 (120)
                      ..++++|+.|++  +||+..+....      ++.+|...++++.        ++++.|+.++            .....|
T Consensus       196 ~~~~~~~~~d~~v~i~d~~~~~~~~------~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~  269 (340)
T d1tbga_         196 TRLFVSGACDASAKLWDVREGMCRQ------TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI  269 (340)
T ss_dssp             SSEEEEEETTTEEEEEETTTTEEEE------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC
T ss_pred             cceeEEeecCceEEEEECCCCcEEE------EEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccc
Confidence            568899999999  99998755443      3556666665543        3455677665            223467


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      ...|.+++|+|++++|++|+.|++|+        +||..+ ..++..|.+|.+.+
T Consensus       270 ~~~i~~~~~s~~~~~l~~g~~dg~i~--------iwd~~~-~~~~~~~~~H~~~V  315 (340)
T d1tbga_         270 ICGITSVSFSKSGRLLLAGYDDFNCN--------VWDALK-ADRAGVLAGHDNRV  315 (340)
T ss_dssp             CSCEEEEEECSSSCEEEEEETTSCEE--------EEETTT-CCEEEEECCCSSCE
T ss_pred             cCceEEEEECCCCCEEEEEECCCEEE--------EEECCC-CcEEEEEcCCCCCE
Confidence            78899999999999999999999999        667555 55677777776554

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.15  E-value=7e-11  Score=82.62  Aligned_cols=81  Identities=12%  Similarity=0.020  Sum_probs=57.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------------------EEEeccCCCeeE--------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------------------TDLFGQADAVVK--------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------------------~~~~~~~D~~v~--------   56 (120)
                      +.+|++|+.|+.  +||+.+......     .+..|...+++                  ..++++.|++++        
T Consensus       174 ~~~l~~g~~dg~i~i~d~~~~~~~~~-----~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~  248 (287)
T d1pgua2         174 ETYIAAGDVMGKILLYDLQSREVKTS-----RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM  248 (287)
T ss_dssp             SSEEEEEETTSCEEEEETTTTEEEEC-----CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT
T ss_pred             ccccccccccccccceeecccccccc-----cccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCC
Confidence            568999999998  999976543321     12233333322                  234556676664        


Q ss_pred             ---EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 ---HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ---~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                         ..+.+|...|++++|+|++ .|+|++.|++||+|+
T Consensus       249 ~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~  285 (287)
T d1pgua2         249 KIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWN  285 (287)
T ss_dssp             CCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEE
T ss_pred             eEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEE
Confidence               5667999999999999986 588999999999664

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.11  E-value=1.2e-10  Score=84.00  Aligned_cols=87  Identities=21%  Similarity=0.127  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCC------cceEeeccCCCceE--------EEeccCCCeeE----------Ee
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPG------MGGLEEHLRNPSST--------DLFGQADAVVK----------HV   58 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~------~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~   58 (120)
                      +++|++|+.|++  +||+.+.........      ......|...+.++        .++++.|+.++          .+
T Consensus       266 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~  345 (388)
T d1erja_         266 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM  345 (388)
T ss_dssp             SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             CCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence            568999999999  999975332211110      11233454444443        33455666654          67


Q ss_pred             ccccccCeEEEE------EcCCCCEEEEEeCCCCEEecC
Q psy75            59 LEGHDRGVNWAC------FHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        59 l~gH~~~V~~v~------fsp~~~~laSgs~D~~iki~~   91 (120)
                      +.+|.+.|.+++      |+|++++|||||.|++|+||+
T Consensus       346 l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~  384 (388)
T d1erja_         346 LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK  384 (388)
T ss_dssp             EECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred             EeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEe
Confidence            889999999987      578899999999999999553

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.09  E-value=2.2e-10  Score=83.72  Aligned_cols=84  Identities=13%  Similarity=0.020  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE--------------Eecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK--------------HVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~--------------~~l~   60 (120)
                      +++|+|||.|++  +||+.+......    ..+.+|...+.++.        +.++.|++++              ....
T Consensus        63 ~~~l~s~s~D~~i~vWd~~~~~~~~~----~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~  138 (371)
T d1k8kc_          63 SNRIVTCGTDRNAYVWTLKGRTWKPT----LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK  138 (371)
T ss_dssp             TTEEEEEETTSCEEEEEEETTEEEEE----EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT
T ss_pred             CCEEEEEECCCeEEEEeecccccccc----cccccccccccccccccccccceeecccCcceeeeeeccccccccccccc
Confidence            679999999999  999975432211    12334444444433        3344555543              3455


Q ss_pred             ccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      +|...|.+++|||+++.||+|+.|+++++|+.
T Consensus       139 ~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~  170 (371)
T d1k8kc_         139 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA  170 (371)
T ss_dssp             TCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred             ccccccccccccccccceeccccCcEEEEEee
Confidence            79999999999999999999999999998753

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.09  E-value=4.2e-10  Score=82.19  Aligned_cols=82  Identities=15%  Similarity=0.112  Sum_probs=64.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE------------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK------------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~------------~~l~gH   62 (120)
                      +++||+|+.|++  +||+.+.+....    ..+.+|...|+++.+        +++.|++++            ..+.+|
T Consensus        19 g~~la~~~~~~~i~iw~~~~~~~~~~----~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~   94 (371)
T d1k8kc_          19 RTQIAICPNNHEVHIYEKSGNKWVQV----HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI   94 (371)
T ss_dssp             SSEEEEECSSSEEEEEEEETTEEEEE----EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCC
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEEE----EEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccc
Confidence            468999999998  999976432211    357788888877654        345677665            345689


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      ...|.+++|+|+++.|++|+.|+++++|
T Consensus        95 ~~~v~~i~~~p~~~~l~~~s~d~~i~i~  122 (371)
T d1k8kc_          95 NRAARCVRWAPNEKKFAVGSGSRVISIC  122 (371)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred             cccccccccccccccceeecccCcceee
Confidence            9999999999999999999999999986

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.09  E-value=3.3e-10  Score=79.38  Aligned_cols=82  Identities=12%  Similarity=-0.028  Sum_probs=59.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE-------------Eeccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK-------------HVLEG   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~-------------~~l~g   61 (120)
                      +++|++|+.|+.  +||+.+......     ....|...+.++.        +.++.|+.++             ..+.+
T Consensus       148 ~~~l~~g~~dg~i~~~d~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~  222 (299)
T d1nr0a2         148 KQFVAVGGQDSKVHVYKLSGASVSEV-----KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTF  222 (299)
T ss_dssp             SCEEEEEETTSEEEEEEEETTEEEEE-----EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCC
T ss_pred             cccccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            468999999999  999976433211     2234554444432        3444566554             35568


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |...|++++|+|++++|++|+.|++|++|+
T Consensus       223 h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd  252 (299)
T d1nr0a2         223 HTAKVACVSWSPDNVRLATGSLDNSVIVWN  252 (299)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             cccccccccccccccceEEEcCCCEEEEEE
Confidence            999999999999999999999999999663

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.8e-10  Score=78.71  Aligned_cols=79  Identities=23%  Similarity=0.036  Sum_probs=55.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCc------eEEEeccCCCeeE-------------------E
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPS------STDLFGQADAVVK-------------------H   57 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~------~~~~~~~~D~~v~-------------------~   57 (120)
                      +.+|++++.|++  +||+.+.......      ..|...+.      ...++++.|+.++                   +
T Consensus       188 ~~~l~~~~~dg~i~i~d~~~~~~~~~~------~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~  261 (293)
T d1p22a2         188 DRLVVSGSSDNTIRLWDIECGACLRVL------EGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR  261 (293)
T ss_dssp             TTEEEEEETTSCEEEEETTTCCEEEEE------CCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEE
T ss_pred             CCeEEEecCCCEEEEEecccceeeeee------cccceeeeeccccceEEEEEcCCCEEEEEECCCCccccccCCceeeE
Confidence            467899999998  9998765443322      22222221      2344556666654                   5


Q ss_pred             eccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ++.+|...|++++|+|  ..|+|||.|++|++|+
T Consensus       262 ~~~~H~~~V~~v~~d~--~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         262 TLVEHSGRVFRLQFDE--FQIVSSSHDDTILIWD  293 (293)
T ss_dssp             EECCCSSCCCCEEECS--SCEEECCSSSEEEEEC
T ss_pred             EecCCCCCEEEEEEcC--CEEEEEecCCEEEEeC
Confidence            6789999999999965  5899999999999775

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=8.6e-10  Score=79.25  Aligned_cols=80  Identities=13%  Similarity=-0.073  Sum_probs=57.7

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE---------EeccccccC
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK---------HVLEGHDRG   65 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~---------~~l~gH~~~   65 (120)
                      +++|++|+.|+.  +||+.......       ...|...++++        .++++.|+.++         ....+|...
T Consensus       236 ~~~l~~~~~d~~i~i~d~~~~~~~~-------~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~  308 (337)
T d1gxra_         236 GEWLAVGMESSNVEVLHVNKPDKYQ-------LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS  308 (337)
T ss_dssp             SSEEEEEETTSCEEEEETTSSCEEE-------ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSC
T ss_pred             ccccceecccccccccccccccccc-------ccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccCCCC
Confidence            568999999998  99997654432       22344334332        34455677665         112358899


Q ss_pred             eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            66 VNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        66 V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |++++|+|++++|||||.|++|+||+
T Consensus       309 v~~~~~s~d~~~l~t~s~D~~I~vWd  334 (337)
T d1gxra_         309 VLSCDISVDDKYIVTGSGDKKATVYE  334 (337)
T ss_dssp             EEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             EEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            99999999999999999999999764

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.8e-09  Score=76.52  Aligned_cols=85  Identities=9%  Similarity=-0.070  Sum_probs=58.3

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE------------Eecccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK------------HVLEGH   62 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~------------~~l~gH   62 (120)
                      +++|+||+ |++  +||+.......... .....+|...|.++.        ++++.|+.++            ..+.+|
T Consensus        63 g~~latg~-dg~V~iWd~~~~~~~~~~~-~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  140 (337)
T d1gxra_          63 TRHVYTGG-KGCVKVWDISHPGNKSPVS-QLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS  140 (337)
T ss_dssp             SSEEEEEC-BSEEEEEETTSTTCCSCSE-EEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECS
T ss_pred             CCEEEEEE-CCEEEEEEccCCcccceeE-EeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccccccccccc
Confidence            57999998 777  99997543221110 011224555555433        3455666654            556789


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ...|.+++|+|++..+++++.|+.|++|+
T Consensus       141 ~~~v~~~~~~~~~~~l~s~~~d~~i~~~~  169 (337)
T d1gxra_         141 APACYALAISPDSKVCFSCCSDGNIAVWD  169 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999653

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.90  E-value=2.9e-09  Score=74.37  Aligned_cols=82  Identities=13%  Similarity=-0.029  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE-------eccCCCeeE------------Eecccc
Q psy75             4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL-------FGQADAVVK------------HVLEGH   62 (120)
Q Consensus         4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~-------~~~~D~~v~------------~~l~gH   62 (120)
                      =+++|||||.|++  +||+.+++...      ++.+|...|.++.+       +++.|++++            .....+
T Consensus        22 ~~~~l~tgs~Dg~i~vWd~~~~~~~~------~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~   95 (355)
T d1nexb2          22 EDNYVITGADDKMIRVYDSINKKFLL------QLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNS   95 (355)
T ss_dssp             ETTEEEEEETTTEEEEEETTTTEEEE------EEECCSSCEEEEEEETTTEEEEEETTCCEEEEETTTTEEEEEECCCSS
T ss_pred             CCCEEEEEeCCCeEEEEECCCCcEEE------EEECCCCCEEEEEEcCCCEEEEEecccccccccccccccccccccccc
Confidence            4689999999999  99998765543      57788887776544       456777775            122234


Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ...+....++|++..+++++.|++|++|+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~d~~i~iw~  124 (355)
T d1nexb2          96 TVRCLDIVEYKNIKYIVTGSRDNTLHVWK  124 (355)
T ss_dssp             CEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred             cccccccccccccceeeeecCCCcEEEEE
Confidence            44567788999999999999999999764

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.3e-09  Score=73.72  Aligned_cols=79  Identities=15%  Similarity=0.022  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCc------eEEEeccCCCeeE----------Eec-----cc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPS------STDLFGQADAVVK----------HVL-----EG   61 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~------~~~~~~~~D~~v~----------~~l-----~g   61 (120)
                      +++|++|+.|++  +||+...........   ...|...+.      ...++++.|++++          +++     .+
T Consensus       227 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~  303 (342)
T d2ovrb2         227 DNILVSGNADSTVKIWDIKTGQCLQTLQG---PNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG  303 (342)
T ss_dssp             TTEEEEEETTSCEEEEETTTCCEEEEECS---TTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGG
T ss_pred             CCEEEEEcCCCEEEEEecccccccccccc---cceeeeceeecccCCCeeEEEcCCCEEEEEECCCCCEEEEEecccCCC
Confidence            567788888887  788765433221110   001111111      1234556676665          233     36


Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCC
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCL   86 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~   86 (120)
                      |...|++++|+|++.++|+|+.||+
T Consensus       304 ~~~~v~~v~~s~~~~~la~g~~dGt  328 (342)
T d2ovrb2         304 SGGVVWRIRASNTKLVCAVGSRNGT  328 (342)
T ss_dssp             GTCEEEEEEECSSEEEEEEECSSSS
T ss_pred             CCCCEEEEEECCCCCEEEEEeCCCC
Confidence            8888999999999999999999986

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=5.9e-09  Score=76.46  Aligned_cols=87  Identities=8%  Similarity=-0.025  Sum_probs=53.8

Q ss_pred             CCEEEEEcCCCc--eEecCCCceee-ccCC--c--ce-------EeeccCCCceE-------EEeccCCCeeE-------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKN-VAPG--M--GG-------LEEHLRNPSST-------DLFGQADAVVK-------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~-~~~~--~--~~-------l~~h~~~v~~~-------~~~~~~D~~v~-------   56 (120)
                      .+++++++.|++  +|++....... ....  .  ..       ...+...++++       .++++.|++++       
T Consensus       136 ~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~  215 (393)
T d1sq9a_         136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTL  215 (393)
T ss_dssp             CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTT
T ss_pred             ccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeeccc
Confidence            468899999999  99985321100 0000  0  00       00111123332       34566787775       


Q ss_pred             ---------EeccccccCeEEEEEcCCCCEEEEEeCCCC---EEecC
Q psy75            57 ---------HVLEGHDRGVNWACFHPTLPLIVSGKGLCL---LDHGP   91 (120)
Q Consensus        57 ---------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~---iki~~   91 (120)
                               ..+.+|...|++++|||++++|++||.|++   |++|+
T Consensus       216 ~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd  262 (393)
T d1sq9a_         216 RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE  262 (393)
T ss_dssp             EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred             ccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecc
Confidence                     245689999999999999999999999986   77554

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=4.8e-09  Score=71.31  Aligned_cols=57  Identities=18%  Similarity=0.146  Sum_probs=36.4

Q ss_pred             CCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEE
Q psy75             3 AIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVS   80 (120)
Q Consensus         3 ~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laS   80 (120)
                      +=+++|||||.|++  +||+.+++..                              +++.+|...|++++|+  +++|+|
T Consensus        23 ~d~~~l~sgs~Dg~i~vWd~~~~~~~------------------------------~~l~~H~~~V~~v~~~--~~~l~s   70 (293)
T d1p22a2          23 YDDQKIVSGLRDNTIKIWDKNTLECK------------------------------RILTGHTGSVLCLQYD--ERVIIT   70 (293)
T ss_dssp             CCSSEEEEEESSSCEEEEESSSCCEE------------------------------EEECCCSSCEEEEECC--SSEEEE
T ss_pred             EcCCEEEEEeCCCeEEEEECCCCcEE------------------------------EEEecCCCCEeeeecc--cceeec
Confidence            34689999999999  9998654332                              3444566666666553  346666


Q ss_pred             EeCCCCEEecC
Q psy75            81 GKGLCLLDHGP   91 (120)
Q Consensus        81 gs~D~~iki~~   91 (120)
                      |+.|++|++|+
T Consensus        71 ~s~D~~i~~~~   81 (293)
T d1p22a2          71 GSSDSTVRVWD   81 (293)
T ss_dssp             EETTSCEEEEE
T ss_pred             ccccccccccc
Confidence            66666666543

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.81  E-value=1.5e-08  Score=69.87  Aligned_cols=31  Identities=13%  Similarity=0.070  Sum_probs=27.9

Q ss_pred             cccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      .+|...|++++|||++++||||+.|++|++|
T Consensus       248 ~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vW  278 (342)
T d1yfqa_         248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCW  278 (342)
T ss_dssp             CSSCCCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred             CcccccceeEEecCCccEEEEECCCCEEEEE
Confidence            4677889999999999999999999999944

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.81  E-value=8.1e-09  Score=72.02  Aligned_cols=77  Identities=12%  Similarity=0.032  Sum_probs=52.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE-----------Eeccccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK-----------HVLEGHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~-----------~~l~gH~   63 (120)
                      +++|++|+.|++  +||+......        +..|...+.++        .+.++.|++++           ..+.+|.
T Consensus       253 ~~~l~~~~~dg~i~iwd~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg~~~~~~~~~~~  324 (355)
T d1nexb2         253 DKFLVSAAADGSIRGWDANDYSRK--------FSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDA  324 (355)
T ss_dssp             SSEEEEECTTSEEEEEETTTCCEE--------EEEECTTCCCCCEEEECSSEEEEEETTEEEEEETTTCCBCCSCTTTTC
T ss_pred             cceeeeeeccccccccccccccee--------cccccCCceEEEEEcCCCCEEEEEeCCEEEEEECCCCCEEEEEecCCC
Confidence            678999999999  9998764332        22333322221        12223355554           3456899


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHG   90 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~   90 (120)
                      ..|++++|+|+ .++++++.|++++||
T Consensus       325 ~~V~~v~~~~~-~~~~~~s~dg~~~l~  350 (355)
T d1nexb2         325 DQIWSVNFKGK-TLVAAVEKDGQSFLE  350 (355)
T ss_dssp             SEEEEEEEETT-EEEEEEESSSCEEEE
T ss_pred             CCEEEEEEcCC-eEEEEEECCCcEEEE
Confidence            99999999997 578899999998865

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.80  E-value=2.2e-08  Score=71.81  Aligned_cols=96  Identities=10%  Similarity=0.003  Sum_probs=61.1

Q ss_pred             CCEEEEEcC--CCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE-------------Ee
Q psy75             5 FRLVLSSTP--DHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK-------------HV   58 (120)
Q Consensus         5 ~~~L~S~s~--D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~-------------~~   58 (120)
                      +++|++++.  |+.  +|+.+.+....      .+.+|...++++         .+.++.|+.++             ..
T Consensus       127 ~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  200 (325)
T d1pgua1         127 GRRLCVVGEGRDNFGVFISWDSGNSLG------EVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT  200 (325)
T ss_dssp             SSEEEEEECCSSCSEEEEETTTCCEEE------ECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS
T ss_pred             CCccceeeccccceEEEEeecccccce------eeeecccccccccccccccceEEEeecccccccccccccccceeccc
Confidence            356666654  444  88887654432      233455444432         33455566654             23


Q ss_pred             ccccccCeEEEEEcCC-CCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75            59 LEGHDRGVNWACFHPT-LPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG  115 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~-~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (120)
                      +.+|...|.+++|+|+ +.+|++|+.|++|+        +||.++ ..++..|++|..
T Consensus       201 ~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~--------iwd~~~-~~~~~~l~~~~~  249 (325)
T d1pgua1         201 HHKQGSFVRDVEFSPDSGEFVITVGSDRKIS--------CFDGKS-GEFLKYIEDDQE  249 (325)
T ss_dssp             SSCTTCCEEEEEECSTTCCEEEEEETTCCEE--------EEETTT-CCEEEECCBTTB
T ss_pred             ccCCCCccEEeeeccccceecccccccccee--------eeeecc-cccccccccccc
Confidence            4578889999999997 57899999999999        555444 445566665544

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.79  E-value=4e-09  Score=73.64  Aligned_cols=39  Identities=10%  Similarity=0.094  Sum_probs=35.7

Q ss_pred             CeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            53 AVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        53 ~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      |++.+++.||...|++++|||++++|||||.|++|++|+
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd   40 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD   40 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEE
Confidence            467789999999999999999999999999999999553

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.75  E-value=4e-08  Score=68.14  Aligned_cols=52  Identities=12%  Similarity=0.062  Sum_probs=40.5

Q ss_pred             eccccccCeEEEEEcCCC----------CEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75            58 VLEGHDRGVNWACFHPTL----------PLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA  117 (120)
Q Consensus        58 ~l~gH~~~V~~v~fsp~~----------~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (120)
                      .+.+|...|++++|+|.+          .+|||||.|++|+        +||..+....+..+++|.+.+
T Consensus       200 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~--------iw~~~~~~~~~~~~~~h~~~V  261 (287)
T d1pgua2         200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF--------IYSVKRPMKIIKALNAHKDGV  261 (287)
T ss_dssp             CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEE--------EEESSCTTCCEEETTSSTTCE
T ss_pred             cccccccccceeeecccccccccccCCCCeeEeecCCCeEE--------EEECCCCCeEEEEeCCCCCCe
Confidence            456899999999999854          5899999999999        566555455667777776654

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.71  E-value=2.6e-08  Score=71.37  Aligned_cols=87  Identities=9%  Similarity=-0.089  Sum_probs=55.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCC--cceEeeccCCCceEEEec----------cCC----------CeeEEecc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPG--MGGLEEHLRNPSSTDLFG----------QAD----------AVVKHVLE   60 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~--~~~l~~h~~~v~~~~~~~----------~~D----------~~v~~~l~   60 (120)
                      +++|+||+.|++  +||+...........  ...+..|...+.++.++.          +.+          +.....+.
T Consensus        77 g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (325)
T d1pgua1          77 SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVS  156 (325)
T ss_dssp             CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECC
T ss_pred             CCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeee
Confidence            368999999999  999864222111000  012334444455433221          112          22336778


Q ss_pred             ccccCeEEEEEcCCCC-EEEEEeCCCCEEecC
Q psy75            61 GHDRGVNWACFHPTLP-LIVSGKGLCLLDHGP   91 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~   91 (120)
                      +|...|++++|+|+++ ++++++.|+.+++|+
T Consensus       157 ~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d  188 (325)
T d1pgua1         157 GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQ  188 (325)
T ss_dssp             SCSSCEEEEEECSSSSCEEEEEETTTEEEEEE
T ss_pred             ecccccccccccccccceEEEeeccccccccc
Confidence            9999999999999987 478999999999654

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.69  E-value=2e-08  Score=69.32  Aligned_cols=61  Identities=11%  Similarity=-0.153  Sum_probs=46.0

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEEEEcCCC-CEEEEE
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTL-PLIVSG   81 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~-~~laSg   81 (120)
                      +++|||||.|++  +||+.......                          .+ ....+|...|.+++|+|++ .+|+||
T Consensus        23 ~~~L~s~s~Dg~v~iwd~~~~~~~~--------------------------~~-~~~~~h~~~V~~v~f~~~~~~~l~sg   75 (342)
T d1yfqa_          23 KSLLLITSWDGSLTVYKFDIQAKNV--------------------------DL-LQSLRYKHPLLCCNFIDNTDLQIYVG   75 (342)
T ss_dssp             GTEEEEEETTSEEEEEEEETTTTEE--------------------------EE-EEEEECSSCEEEEEEEESSSEEEEEE
T ss_pred             CCEEEEEECCCeEEEEEccCCCcce--------------------------EE-EEecCCCCCEEEEEEeCCCCCEEEEc
Confidence            579999999999  99985422110                          01 1223689999999999976 479999


Q ss_pred             eCCCCEEecCC
Q psy75            82 KGLCLLDHGPN   92 (120)
Q Consensus        82 s~D~~iki~~~   92 (120)
                      +.|++|++|+-
T Consensus        76 ~~d~~v~~w~~   86 (342)
T d1yfqa_          76 TVQGEILKVDL   86 (342)
T ss_dssp             ETTSCEEEECS
T ss_pred             ccccceeeeec
Confidence            99999998765

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4.9e-08  Score=67.57  Aligned_cols=79  Identities=19%  Similarity=0.117  Sum_probs=54.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------EEEeccCCCeeE----------Eecc---ccc
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------TDLFGQADAVVK----------HVLE---GHD   63 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------~~~~~~~D~~v~----------~~l~---gH~   63 (120)
                      +++|++|+.|++  +||+.......      .+..|...+.+      ..++++.|+.++          ..+.   .|.
T Consensus       187 ~~~l~s~~~dg~i~~~d~~~~~~~~------~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~  260 (342)
T d2ovrb2         187 GIHVVSGSLDTSIRVWDVETGNCIH------TLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ  260 (342)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCEEE------EECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCS
T ss_pred             CCEEEEEeCCCeEEEeecccceeee------EecccccceeEEecCCCEEEEEcCCCEEEEEecccccccccccccceee
Confidence            578999999999  99998755443      23344444433      234556677665          3333   467


Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            64 RGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        64 ~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..+.+++|+|  .++++|+.|++|++|+
T Consensus       261 ~~~~~~~~~~--~~~~s~s~Dg~i~iwd  286 (342)
T d2ovrb2         261 SAVTCLQFNK--NFVITSSDDGTVKLWD  286 (342)
T ss_dssp             SCEEEEEECS--SEEEEEETTSEEEEEE
T ss_pred             eceeecccCC--CeeEEEcCCCEEEEEE
Confidence            7888888876  5899999999999553

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.33  E-value=1.9e-06  Score=60.39  Aligned_cols=80  Identities=8%  Similarity=-0.107  Sum_probs=54.2

Q ss_pred             CCEEEEEcCCCc-eEecCCCceeeccCCcceEeeccCCCceEEE--------e-ccCCC-eeE---------Eecccccc
Q psy75             5 FRLVLSSTPDHH-HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------F-GQADA-VVK---------HVLEGHDR   64 (120)
Q Consensus         5 ~~~L~S~s~D~t-lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~-~~~D~-~v~---------~~l~gH~~   64 (120)
                      ++++|+++.... +||+.++.....        .|...+.++.+        + +..++ .+.         ..+.+|..
T Consensus        15 G~~~a~~~~g~v~v~d~~~~~~~~~--------~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~   86 (360)
T d1k32a3          15 GDLIAFVSRGQAFIQDVSGTYVLKV--------PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLG   86 (360)
T ss_dssp             GGCEEEEETTEEEEECTTSSBEEEC--------SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCC
T ss_pred             CCEEEEEECCeEEEEECCCCcEEEc--------cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEeeCCCc
Confidence            467888886655 999987654432        23333433222        2 22222 222         56678999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            65 GVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        65 ~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                      .|.+++|+|+++.|++++.|+.+++|.-
T Consensus        87 ~v~~~~~spdg~~l~~~~~~~~~~~~~~  114 (360)
T d1k32a3          87 NVFAMGVDRNGKFAVVANDRFEIMTVDL  114 (360)
T ss_dssp             SEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             eEEeeeecccccccceeccccccccccc
Confidence            9999999999999999999999996543

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.21  E-value=1.8e-06  Score=63.79  Aligned_cols=36  Identities=8%  Similarity=-0.016  Sum_probs=29.1

Q ss_pred             eEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            55 VKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        55 v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +..++..|. .+..++|||||++|++++.|+++++|+
T Consensus        54 ~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd   89 (426)
T d1hzua2          54 IVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMID   89 (426)
T ss_dssp             EEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred             EEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEE
Confidence            344555553 589999999999999999999999664

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.02  E-value=4.9e-06  Score=62.18  Aligned_cols=77  Identities=8%  Similarity=-0.180  Sum_probs=51.6

Q ss_pred             EEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE---------------Eecccc
Q psy75             8 VLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK---------------HVLEGH   62 (120)
Q Consensus         8 L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~---------------~~l~gH   62 (120)
                      +++.+.|++  +||..+++....      +..+ ..+..+        .+.++.|+++.               ....+|
T Consensus        35 ~v~~~d~g~v~v~D~~t~~v~~~------~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~  107 (432)
T d1qksa2          35 SVTLRDAGQIALIDGSTYEIKTV------LDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA  107 (432)
T ss_dssp             EEEETTTTEEEEEETTTCCEEEE------EECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE
T ss_pred             EEEEcCCCEEEEEECCCCcEEEE------EeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCC
Confidence            589999999  999988766543      2222 122222        23344555553               222367


Q ss_pred             ccCeEEEEEcCCCCE-EEEEeCCCCEEecC
Q psy75            63 DRGVNWACFHPTLPL-IVSGKGLCLLDHGP   91 (120)
Q Consensus        63 ~~~V~~v~fsp~~~~-laSgs~D~~iki~~   91 (120)
                      ...+.+++|+|||+. +++++.|+++++|+
T Consensus       108 ~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d  137 (432)
T d1qksa2         108 RSIETSKMEGWEDKYAIAGAYWPPQYVIMD  137 (432)
T ss_dssp             EEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred             CCeEEecccCCCCCEEEEEcCCCCeEEEEe
Confidence            777888899999986 58899999999654

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.89  E-value=6.8e-05  Score=52.05  Aligned_cols=82  Identities=2%  Similarity=-0.170  Sum_probs=53.9

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec------------------cCCCeeE--------
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG------------------QADAVVK--------   56 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~------------------~~D~~v~--------   56 (120)
                      +++|++++.|++  +|++.+.....      .+..|...+.++.+++                  ..++.+.        
T Consensus        97 g~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~  170 (360)
T d1k32a3          97 GKFAVVANDRFEIMTVDLETGKPTV------IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK  170 (360)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEE------EEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred             ccccceeccccccccccccccceee------eeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCc
Confidence            578999999998  99997655432      2233333333222211                  1111111        


Q ss_pred             -EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75            57 -HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN   92 (120)
Q Consensus        57 -~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~   92 (120)
                       ..+..|...+..++|+|+|+.|++++.|+.+++|+.
T Consensus       171 ~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~  207 (360)
T d1k32a3         171 IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR  207 (360)
T ss_dssp             EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred             eeeecccccccccccccCCCCEEEEEeCCCceEcccc
Confidence             344467778899999999999999999999998765

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.80  E-value=1.5e-05  Score=54.92  Aligned_cols=57  Identities=5%  Similarity=-0.045  Sum_probs=40.7

Q ss_pred             CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEEEEcCCCCEE-EEEe
Q psy75             6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLI-VSGK   82 (120)
Q Consensus         6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~l-aSgs   82 (120)
                      +|+++++.|++  +||+.+.+...      .+.                      +..+...+..++|+|||+.+ ++++
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~------~i~----------------------~~~~~~~~~~i~~spDg~~l~v~~~   53 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDK------VIT----------------------IADAGPTPMVPMVAPGGRIAYATVN   53 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEE------EEE----------------------CTTCTTCCCCEEECTTSSEEEEEET
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEE------EEE----------------------CCCCCCCccEEEECCCCCEEEEEEC
Confidence            58999999998  99997643321      111                      12234557789999999865 7888


Q ss_pred             CCCCEEec
Q psy75            83 GLCLLDHG   90 (120)
Q Consensus        83 ~D~~iki~   90 (120)
                      .|++|.+|
T Consensus        54 ~~~~v~v~   61 (337)
T d1pbyb_          54 KSESLVKI   61 (337)
T ss_dssp             TTTEEEEE
T ss_pred             CCCeEEEE
Confidence            89999954

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=97.63  E-value=5.5e-05  Score=52.15  Aligned_cols=58  Identities=9%  Similarity=-0.127  Sum_probs=42.2

Q ss_pred             CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEecc-ccccCeEEEEEcCCCCE-EEE
Q psy75             5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLE-GHDRGVNWACFHPTLPL-IVS   80 (120)
Q Consensus         5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~-gH~~~V~~v~fsp~~~~-laS   80 (120)
                      +++|++++.|++  +||+.+++..                              .++. .|...+.+++|+|||+. +++
T Consensus         8 ~~~l~~~~~~~~v~v~D~~t~~~~------------------------------~t~~~~~~~~p~~l~~spDG~~l~v~   57 (346)
T d1jmxb_           8 HEYMIVTNYPNNLHVVDVASDTVY------------------------------KSCVMPDKFGPGTAMMAPDNRTAYVL   57 (346)
T ss_dssp             CEEEEEEETTTEEEEEETTTTEEE------------------------------EEEECSSCCSSCEEEECTTSSEEEEE
T ss_pred             CcEEEEEcCCCEEEEEECCCCCEE------------------------------EEEEcCCCCCcceEEECCCCCEEEEE
Confidence            468999999999  9999764332                              1222 23455778999999986 577


Q ss_pred             EeCCCCEEecCC
Q psy75            81 GKGLCLLDHGPN   92 (120)
Q Consensus        81 gs~D~~iki~~~   92 (120)
                      ++.++.|.+|+-
T Consensus        58 ~~~~~~v~~~d~   69 (346)
T d1jmxb_          58 NNHYGDIYGIDL   69 (346)
T ss_dssp             ETTTTEEEEEET
T ss_pred             ECCCCcEEEEeC
Confidence            888999997643

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=97.29  E-value=0.0002  Score=49.26  Aligned_cols=30  Identities=10%  Similarity=-0.109  Sum_probs=23.7

Q ss_pred             ccccCeEEEEEcCCCCEE-EEEeCCCCEEec
Q psy75            61 GHDRGVNWACFHPTLPLI-VSGKGLCLLDHG   90 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~~l-aSgs~D~~iki~   90 (120)
                      .|...+..++|||||+.| ++++.|++|++|
T Consensus        34 ~~~~~v~~la~spDG~~L~v~~~~d~~i~~~   64 (333)
T d1ri6a_          34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAY   64 (333)
T ss_dssp             ECSSCCCCEEECTTSSEEEEEETTTTEEEEE
T ss_pred             cCCCCEeEEEEeCCCCEEEEEECCCCeEEEE
Confidence            466788899999999876 566668898865

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.23  E-value=0.00037  Score=51.61  Aligned_cols=46  Identities=11%  Similarity=-0.018  Sum_probs=35.8

Q ss_pred             EEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            45 TDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        45 ~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      +.++....+.+...+..| ..+..++|||||+++++++.|+++++|+
T Consensus        44 v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d   89 (432)
T d1qksa2          44 IALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMID   89 (432)
T ss_dssp             EEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred             EEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEE
Confidence            444444455566777766 3699999999999999999999999664

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.17  E-value=0.00056  Score=49.86  Aligned_cols=36  Identities=14%  Similarity=0.087  Sum_probs=31.0

Q ss_pred             eeEEeccccccCeEEEEEcCCCCEEE-------EEeCCCCEEe
Q psy75            54 VVKHVLEGHDRGVNWACFHPTLPLIV-------SGKGLCLLDH   89 (120)
Q Consensus        54 ~v~~~l~gH~~~V~~v~fsp~~~~la-------Sgs~D~~iki   89 (120)
                      .+..++.+|...++.++|||+++.|+       +++.|++|++
T Consensus       294 ~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~v  336 (426)
T d1hzua2         294 KKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAV  336 (426)
T ss_dssp             SEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEE
T ss_pred             eEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEE
Confidence            44578899999999999999999988       5677899993

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=97.14  E-value=0.0041  Score=41.55  Aligned_cols=37  Identities=5%  Similarity=-0.200  Sum_probs=27.0

Q ss_pred             CeeEEeccccccCeEEEEEcCCCCE-EEEEeCCCCEEec
Q psy75            53 AVVKHVLEGHDRGVNWACFHPTLPL-IVSGKGLCLLDHG   90 (120)
Q Consensus        53 ~~v~~~l~gH~~~V~~v~fsp~~~~-laSgs~D~~iki~   90 (120)
                      +.+...+. +...+..++|+|||+. +++++.|++|++|
T Consensus       234 ~~~~~~~~-~~~~~~~va~spdg~~l~va~~~~~~i~v~  271 (301)
T d1l0qa2         234 NKITARIP-VGPDPAGIAVTPDGKKVYVALSFCNTVSVI  271 (301)
T ss_dssp             TEEEEEEE-CCSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CeEEEEEc-CCCCEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence            33334443 3456899999999986 5788999999944

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=97.02  E-value=0.00046  Score=47.24  Aligned_cols=41  Identities=12%  Similarity=0.152  Sum_probs=32.0

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhh
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~  111 (120)
                      +...+.+++|||||++|++++.|++|+        +||... ..+++.++
T Consensus       290 ~~~~~~~va~s~DG~~l~v~~~d~~v~--------v~D~~t-~~~i~~i~  330 (346)
T d1jmxb_         290 LDHTYYCVAFDKKGDKLYLGGTFNDLA--------VFNPDT-LEKVKNIK  330 (346)
T ss_dssp             CSSCCCEEEECSSSSCEEEESBSSEEE--------EEETTT-TEEEEEEE
T ss_pred             CCCCEEEEEEcCCCCEEEEEeCCCcEE--------EEECcc-CCEEEEEE
Confidence            345699999999999999999999999        677554 44455554

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=96.97  E-value=0.00088  Score=45.05  Aligned_cols=27  Identities=11%  Similarity=-0.120  Sum_probs=21.8

Q ss_pred             CeEEEEEcCCCCEE-EEEeCCCCEEecC
Q psy75            65 GVNWACFHPTLPLI-VSGKGLCLLDHGP   91 (120)
Q Consensus        65 ~V~~v~fsp~~~~l-aSgs~D~~iki~~   91 (120)
                      ....++|+|||++| ++++.+++|++|+
T Consensus        33 ~p~~va~spdG~~l~v~~~~~~~i~v~d   60 (301)
T d1l0qa2          33 NPMGAVISPDGTKVYVANAHSNDVSIID   60 (301)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred             CceEEEEeCCCCEEEEEECCCCEEEEEE
Confidence            46789999999865 7888899999554

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=96.93  E-value=0.00091  Score=45.52  Aligned_cols=40  Identities=10%  Similarity=-0.006  Sum_probs=31.1

Q ss_pred             cccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhh
Q psy75            62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKL  110 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~  110 (120)
                      +...+.+++|+|||+.|++++.|++|.        +||... ...++++
T Consensus       278 ~~~~~~~~~~s~dG~~l~v~~~~~~i~--------v~D~~t-~~~v~~i  317 (337)
T d1pbyb_         278 LPHSYYSVNVSTDGSTVWLGGALGDLA--------AYDAET-LEKKGQV  317 (337)
T ss_dssp             CSSCCCEEEECTTSCEEEEESBSSEEE--------EEETTT-CCEEEEE
T ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEE--------EEECCC-CcEEEEE
Confidence            566789999999999999999999999        667554 3334433

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=96.56  E-value=0.014  Score=40.50  Aligned_cols=51  Identities=10%  Similarity=-0.026  Sum_probs=35.1

Q ss_pred             CCeeEEeccccccCeEEEEEcCCCC--EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhh
Q psy75            52 DAVVKHVLEGHDRGVNWACFHPTLP--LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEK  112 (120)
Q Consensus        52 D~~v~~~l~gH~~~V~~v~fsp~~~--~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~  112 (120)
                      ++.....+ .+...+..++|+|||+  ++++++.|++|+        +||... -..++.+.+
T Consensus       307 t~~~~~~~-~~~~~~~~~a~spDG~~~l~vt~~~d~~v~--------v~D~~t-g~~~~~~~~  359 (373)
T d2madh_         307 VGQTSSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVLH--------IYDAGA-GDQDQSTVE  359 (373)
T ss_pred             CCcEEEEe-cCCCCeeEEEECCCCCEEEEEEeCCCCeEE--------EEECCC-CCEEEEECC
Confidence            33333433 3567789999999998  467899999999        677655 334555543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=96.40  E-value=0.02  Score=39.13  Aligned_cols=40  Identities=10%  Similarity=0.021  Sum_probs=29.2

Q ss_pred             ccCeEEEEEcCCCC--EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhh
Q psy75            63 DRGVNWACFHPTLP--LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE  111 (120)
Q Consensus        63 ~~~V~~v~fsp~~~--~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~  111 (120)
                      ...+.+++|+|||+  ++++++.|++|.        +||... ...++.++
T Consensus       299 ~~~~~~~a~spDG~~~l~v~~~~d~~i~--------v~D~~t-g~~~~~i~  340 (355)
T d2bbkh_         299 GHEIDSINVSQDEKPLLYALSTGDKTLY--------IHDAES-GEELRSVN  340 (355)
T ss_dssp             EEEECEEEECCSSSCEEEEEETTTTEEE--------EEETTT-CCEEEEEC
T ss_pred             CCCEEEEEEcCCCCeEEEEEECCCCEEE--------EEECCC-CCEEEEEe
Confidence            34578999999997  567888899999        667554 33455554

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.08  E-value=0.0095  Score=43.36  Aligned_cols=34  Identities=9%  Similarity=-0.066  Sum_probs=27.2

Q ss_pred             EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75            57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP   91 (120)
Q Consensus        57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~   91 (120)
                      ..+..|...+..+.|||||+.||..+ |+.+.+++
T Consensus       105 ~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~  138 (470)
T d2bgra1         105 ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKI  138 (470)
T ss_dssp             CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEES
T ss_pred             cccccCCccccccccccCcceeeEee-cccceEEE
Confidence            44567888999999999999999865 56677654

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.31  E-value=0.013  Score=42.60  Aligned_cols=45  Identities=18%  Similarity=0.081  Sum_probs=30.1

Q ss_pred             ccccccCeEEEEEcCCCCEEE-EEeC--CCCEEecCCCCceEeeCCCCccchhhhhh
Q psy75            59 LEGHDRGVNWACFHPTLPLIV-SGKG--LCLLDHGPNLFPVVLDSSDFFVPIAKLEK  112 (120)
Q Consensus        59 l~gH~~~V~~v~fsp~~~~la-Sgs~--D~~iki~~~~~~~~~~~~~~~~~~~~~~~  112 (120)
                      +.+|...+++++|||||++++ ++|.  .-.++        +++..+ -..+..||.
T Consensus       411 ~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~--------l~~~~~-g~~v~~le~  458 (470)
T d2bgra1         411 LNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYT--------LHSSVN-DKGLRVLED  458 (470)
T ss_dssp             TSTTTBCBEEEEECTTSSEEEEEECSBSSCEEE--------EEETTT-TEEEEEEEC
T ss_pred             ccCCCCCEEEEEECCCCCEEEEEecCCCCCeEE--------EEECCC-CCEEEEEec
Confidence            347888999999999999755 4443  33466        455454 455666655

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=94.03  E-value=0.13  Score=34.38  Aligned_cols=29  Identities=3%  Similarity=-0.112  Sum_probs=21.6

Q ss_pred             cccCeEEEEEcCCCCEEEEEeC-CCCEEec
Q psy75            62 HDRGVNWACFHPTLPLIVSGKG-LCLLDHG   90 (120)
Q Consensus        62 H~~~V~~v~fsp~~~~laSgs~-D~~iki~   90 (120)
                      +...+..++|+|||+.|++++. ++++.+|
T Consensus        81 ~~~~p~~l~~spDg~~l~v~~~~~~~v~~~  110 (333)
T d1ri6a_          81 LPGSLTHISTDHQGQFVFVGSYNAGNVSVT  110 (333)
T ss_dssp             CSSCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             cCCCceEEEEcCCCCEEeecccCCCceeee
Confidence            3445678999999998777775 6677764

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=93.65  E-value=0.29  Score=33.38  Aligned_cols=32  Identities=13%  Similarity=-0.071  Sum_probs=25.5

Q ss_pred             ccccCeEEEEEcCCCC-EEEEEeCCCCEEecCC
Q psy75            61 GHDRGVNWACFHPTLP-LIVSGKGLCLLDHGPN   92 (120)
Q Consensus        61 gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~~   92 (120)
                      .|.....++.|+|+++ .+++++.|+++.+|+.
T Consensus       162 ~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~  194 (373)
T d2madh_         162 QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH  194 (373)
T ss_pred             EEeccceeEEEecCCCcEEEEEcCCCeEEEEEc
Confidence            4556677899999997 5688999999997654

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=92.89  E-value=0.031  Score=41.93  Aligned_cols=33  Identities=18%  Similarity=0.082  Sum_probs=29.0

Q ss_pred             cccccCeEEEEEcCCCCEEEEE---eCCCCEEecCC
Q psy75            60 EGHDRGVNWACFHPTLPLIVSG---KGLCLLDHGPN   92 (120)
Q Consensus        60 ~gH~~~V~~v~fsp~~~~laSg---s~D~~iki~~~   92 (120)
                      .||...+.+.+|+|||++|+|+   |-|+.+-+++-
T Consensus       365 ~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~~~~g~~  400 (441)
T d1qnia2         365 PGHNHASLTESRDADGKWLVVLSKFSKDRFLPVGPL  400 (441)
T ss_dssp             EEEEEETTTTSTTCCCCEEEEEESCCGGGSCCCSSS
T ss_pred             CCCCccccccccCCCCcEEEecCccccccCcCCCCC
Confidence            5899999999999999999999   77888877665

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=91.82  E-value=0.13  Score=34.88  Aligned_cols=47  Identities=6%  Similarity=-0.055  Sum_probs=30.2

Q ss_pred             ceEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEE----------eCCCCEEecC
Q psy75            43 SSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSG----------KGLCLLDHGP   91 (120)
Q Consensus        43 ~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSg----------s~D~~iki~~   91 (120)
                      +.+.++....+.+..++..+..  ..++|||||+.|+..          +.|+.|++|+
T Consensus        28 ~~v~v~D~~tg~~~~~~~~g~~--~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D   84 (355)
T d2bbkh_          28 TQQFVIDGEAGRVIGMIDGGFL--PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFD   84 (355)
T ss_dssp             EEEEEEETTTTEEEEEEEECSS--CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             CeEEEEECCCCcEEEEEECCCC--CceEEcCCCCEEEEEeCCCccccccCCCCEEEEEE
Confidence            3445555555666666654433  379999999976543          3477888665

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=90.64  E-value=0.22  Score=34.44  Aligned_cols=28  Identities=11%  Similarity=-0.080  Sum_probs=22.7

Q ss_pred             ccCeEEEEEcCCCC--EEEEEeCCCCEEec
Q psy75            63 DRGVNWACFHPTLP--LIVSGKGLCLLDHG   90 (120)
Q Consensus        63 ~~~V~~v~fsp~~~--~laSgs~D~~iki~   90 (120)
                      ...+.+++|+|||+  ++++++.|++|++|
T Consensus       313 ~~~~~~~a~spDG~~~ly~s~~~~~~v~v~  342 (368)
T d1mdah_         313 GHDSDAIIAAQDGASDNYANSAGTEVLDIY  342 (368)
T ss_dssp             EEEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred             CCceeEEEECCCCCEEEEEEeCCCCeEEEE
Confidence            45688999999996  46788889999944