Psyllid ID: psy7641

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-----
Protein Sequence
MLGVYQLGIEDEQGFPSSQVNLRLHSILRQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ
Secondary Structure (PSIPRED)
cccEEEEcccccccccEEEEEccHHHHHHccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccccccccEEEEEcccHHccccHHHccHHHHHHcccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHH
Coil and Loop (DISEMBL)
mlgvyqlgiedeqgfpssqvNLRLHSILRQSMGLAFSLRERQqlgihglmpptiknqdqQIEVCRESVRRFQEDLNKFTYLSELQ
Flexible Loop (DISEMBL)
MLGVYQLgiedeqgfpSSQVNLRLHSILRQSMGLAFSLRERQQLGIHGlmpptiknqdQQIEVCRESVRRFQEdlnkftylselq
Low Complexity Region (SEG)
MLGVYQLGIEDEQGFPSSQVNLRLHSILRQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ
Disordered region (IsUnstruct)
*******************VNLRLHSILRQSMGLAFSLRERQQLGIHGLMPPTIK****QIEVCRESVRRFQEDLNKFTY*****
Disordered Region (DISOPRED)
MLGVYQ*GIEDEQGFPSSQVNLRLHSILRQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ
Disordered Region (DISEMBL)
MLGVYQLGIEDEQGFPSSQVNLRLHSILRQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ
Disordered Region (DISPRO)
MLGVYQLGIEDEQGFPSSQVNLRLHSILRQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLGVYQLGIEDEQGFPSSQVNLRLHSILRQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	85	2.2.26 [Sep-21-2011]
P28227	557	NADP-dependent malic enzy	N/A	N/A	0.741	0.113	0.409	1e-07
P40927	557	NADP-dependent malic enzy	N/A	N/A	0.623	0.095	0.452	1e-07
Q16798	604	NADP-dependent malic enzy	yes	N/A	0.623	0.087	0.490	3e-07
P45868	582	Probable NAD-dependent ma	yes	N/A	0.694	0.101	0.440	8e-07
Q99KE1	589	NAD-dependent malic enzym	yes	N/A	0.670	0.096	0.385	2e-06
P23368	584	NAD-dependent malic enzym	no	N/A	0.670	0.097	0.385	2e-06
Q29558	557	NADP-dependent malic enzy	no	N/A	0.611	0.093	0.442	2e-06
Q8BMF3	604	NADP-dependent malic enzy	no	N/A	0.623	0.087	0.471	2e-06
P13697	572	NADP-dependent malic enzy	no	N/A	0.611	0.090	0.461	3e-06
Q48662	540	Malolactic enzyme OS=Lact	yes	N/A	0.741	0.116	0.378	5e-06

>sp|P28227|MAOX_ANAPL NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 23 RLHSILRQ---SMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFT 79
          R + +LR    + G+AF+L ERQQL IHGL+PP    QD Q+    ++  R   DL+++ 
Sbjct: 3  RGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDVQVFSILKNFERLTSDLDRYI 62

Query: 80 YLSELQ 85
           L  LQ
Sbjct: 63 LLMSLQ 68

Anas platyrhynchos (taxid: 8839)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 0

>sp|P40927|MAOX_COLLI NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/53 (45%), Positives = 33/53 (62%)

Query: 33 GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          G+AF+L ERQQL IHGL+PP    QD Q+    ++  R   DL+++  L  LQ
Sbjct: 16 GMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQ 68

Columba livia (taxid: 8932)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 0

>sp|Q16798|MAON_HUMAN NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/53 (49%), Positives = 33/53 (62%)

Query: 33  GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           G+AF+L ER QLGIHGL+PP   +QD Q+        R Q DL+K+  L  LQ
Sbjct: 62  GMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQ 114

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 0

>sp|P45868|MAO2_BACSU Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis (strain 168) GN=maeA PE=1 SV=1

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 38/59 (64%)

Query: 26 SILRQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSEL 84
          SI   + G+AFSL ERQ+LG+ GL+PPT+ + DQQ +   E  +   + L +  YLS+L
Sbjct: 40 SIPTLNKGVAFSLEERQELGLEGLLPPTVLSLDQQAQRAYEQFQAQPDRLRQNVYLSDL 98

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q99KE1|MAOM_MOUSE NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 36/57 (63%)

Query: 29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          R + G+AF+L+ERQ LG+ GL+PP I+ QD Q      ++++    L K+ Y+  +Q
Sbjct: 33 RTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQ 89

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|P23368|MAOM_HUMAN NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 36/57 (63%)

Query: 29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          R + G+AF+L+ERQ LG+ GL+PP I+ QD Q      ++++    L K+ Y+  +Q
Sbjct: 33 RTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQ 89

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q29558|MAOX_PIG NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query: 34 LAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          LAF+L ERQQL IHGL+PP   +QD Q+    ++  R   D +++  L +LQ
Sbjct: 14 LAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQ 65

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 0

>sp|Q8BMF3|MAON_MOUSE NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=2

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 32/53 (60%)

Query: 33  GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           G+AF+L ER QLGIHGL+PP   +QD Q+          Q DL+K+  L  LQ
Sbjct: 62  GMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYENQQSDLDKYIILMTLQ 114

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 0

>sp|P13697|MAOX_RAT NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 34 LAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          LAF+L ERQQL IHGL+PP I NQ+ Q+    ++  R   D +++  L +LQ
Sbjct: 28 LAFTLEERQQLKIHGLLPPCIVNQEIQVLRVIKNFERLNSDFDRYLLLMDLQ 79

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 0

>sp|Q48662|MLES_LACLA Malolactic enzyme OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=mleS PE=3 SV=2

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 22 LRLHSILRQ---SMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKF 78
          +R H IL     + G AF+++ERQ+LG+ GL+PPT++  ++Q E   E       DL K 
Sbjct: 1  MRAHEILNNPFLNKGTAFTMKERQELGLIGLLPPTVQTIEEQAEQTYEQYLTKPSDLEKR 60

Query: 79 TYLSEL 84
           +L E+
Sbjct: 61 HFLMEI 66

Key enzyme in the degradation of L-malic acid by lactic acid bacteria.

Lactococcus lactis subsp. lactis (strain IL1403) (taxid: 272623)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
193676229	625	PREDICTED: NADP-dependent malic enzyme-l	0.670	0.091	0.666	2e-15
242011898	1184	NADP-dependent malic enzyme, putative [P	0.670	0.048	0.631	9e-15
170046750	622	malic enzyme [Culex quinquefasciatus] gi	0.670	0.091	0.614	7e-14
157114273	652	malic enzyme [Aedes aegypti] gi|10888362	0.670	0.087	0.596	4e-13
312379935	623	hypothetical protein AND_08082 [Anophele	0.670	0.091	0.596	5e-13
347971359	629	AGAP004159-PB [Anopheles gambiae str. PE	0.670	0.090	0.596	7e-13
347971361	571	AGAP004159-PA [Anopheles gambiae str. PE	0.670	0.099	0.596	7e-13
443419066	623	NADP-dependent malic enzyme-like protein	0.623	0.085	0.603	8e-13
91093505	620	PREDICTED: similar to malic enzyme [Trib	0.670	0.091	0.578	1e-12
321468728	557	hypothetical protein DAPPUDRAFT_304467 [	0.670	0.102	0.543	3e-12

>gi|193676229|ref|XP_001944267.1| PREDICTED: NADP-dependent malic enzyme-like [Acyrthosiphon pisum]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/57 (66%), Positives = 46/57 (80%)

Query: 29  RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           R + GLAF+L ERQ LGIHGLMPP  K Q++Q+EVCR SV ++ EDLNKF YL+ELQ
Sbjct: 65  RLNKGLAFTLEERQALGIHGLMPPKFKTQEEQLEVCRFSVMKYHEDLNKFLYLAELQ 121

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242011898|ref|XP_002426680.1| NADP-dependent malic enzyme, putative [Pediculus humanus corporis] gi|212510851|gb|EEB13942.1| NADP-dependent malic enzyme, putative [Pediculus humanus corporis]

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/57 (63%), Positives = 46/57 (80%)

Query: 29  RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           R + GLAF+L ERQ LGIHGLMPP  K Q++Q+E+C+ SV R++EDLNK+ YL ELQ
Sbjct: 46  RLNKGLAFTLEERQILGIHGLMPPKFKTQEEQVELCKISVERYKEDLNKYLYLCELQ 102

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170046750|ref|XP_001850913.1| malic enzyme [Culex quinquefasciatus] gi|167869417|gb|EDS32800.1| malic enzyme [Culex quinquefasciatus]

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/57 (61%), Positives = 45/57 (78%)

Query: 29  RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           R + GLAF+L ERQ LGIHGL P   KNQ++Q+E+CR S+ R+QEDLNK+ YL +LQ
Sbjct: 67  RLNKGLAFTLEERQVLGIHGLQPARFKNQEEQLELCRISISRYQEDLNKYLYLVDLQ 123

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157114273|ref|XP_001658019.1| malic enzyme [Aedes aegypti] gi|108883625|gb|EAT47850.1| AAEL001091-PA [Aedes aegypti]

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/57 (59%), Positives = 45/57 (78%)

Query: 29  RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           R + GLAF+L ERQ LGIHGL P   K+Q++Q+E+CR S+ R+QEDLNK+ YL +LQ
Sbjct: 97  RLNKGLAFTLEERQTLGIHGLQPARFKSQEEQLELCRISISRYQEDLNKYLYLVDLQ 153

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312379935|gb|EFR26072.1| hypothetical protein AND_08082 [Anopheles darlingi]

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/57 (59%), Positives = 45/57 (78%)

Query: 29  RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           R + GLAF+L ERQ LGIHGL P   K+Q++Q+E+CR S+ R+QEDLNK+ YL +LQ
Sbjct: 67  RLNKGLAFTLEERQILGIHGLQPARFKSQEEQLELCRISISRYQEDLNKYLYLVDLQ 123

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347971359|ref|XP_003436731.1| AGAP004159-PB [Anopheles gambiae str. PEST] gi|333468634|gb|EGK97005.1| AGAP004159-PB [Anopheles gambiae str. PEST]

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/57 (59%), Positives = 45/57 (78%)

Query: 29  RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           R + GLAF+L ERQ LGIHGL P   K+Q++Q+E+CR S+ R+QEDLNK+ YL +LQ
Sbjct: 70  RLNKGLAFTLEERQILGIHGLQPARFKSQEEQLELCRISISRYQEDLNKYLYLVDLQ 126

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347971361|ref|XP_313043.5| AGAP004159-PA [Anopheles gambiae str. PEST] gi|333468633|gb|EAA08510.5| AGAP004159-PA [Anopheles gambiae str. PEST]

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/57 (59%), Positives = 45/57 (78%)

Query: 29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          R + GLAF+L ERQ LGIHGL P   K+Q++Q+E+CR S+ R+QEDLNK+ YL +LQ
Sbjct: 12 RLNKGLAFTLEERQILGIHGLQPARFKSQEEQLELCRISISRYQEDLNKYLYLVDLQ 68

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443419066|gb|AGC84405.1| NADP-dependent malic enzyme-like protein [Locusta migratoria]

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/53 (60%), Positives = 45/53 (84%)

Query: 33  GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           G+AF+L+ERQQLGIHGL+PP IK Q++Q+E+C  +V+R+ +DLNK+ YL  LQ
Sbjct: 87  GMAFTLQERQQLGIHGLLPPRIKTQEEQMELCMLNVQRYPDDLNKYIYLMGLQ 139

Source: Locusta migratoria

Species: Locusta migratoria

Genus: Locusta

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91093505|ref|XP_969151.1| PREDICTED: similar to malic enzyme [Tribolium castaneum] gi|270002678|gb|EEZ99125.1| hypothetical protein TcasGA2_TC005232 [Tribolium castaneum]

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/57 (57%), Positives = 44/57 (77%)

Query: 29  RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           R + GLAF+L ERQ LGIHGL P   K Q++Q+E+CR SV R+QE+LNK+ Y++EL 
Sbjct: 65  RLNKGLAFTLEERQALGIHGLQPARFKTQEEQLELCRISVMRYQENLNKYLYMTELH 121

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321468728|gb|EFX79712.1| hypothetical protein DAPPUDRAFT_304467 [Daphnia pulex]

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/57 (54%), Positives = 44/57 (77%)

Query: 29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          R + G+AF+L ERQ LGIHGL+PP  K Q++Q+E+C  +++R+ EDLNK+ YL  LQ
Sbjct: 12 RLNKGMAFTLAERQALGIHGLIPPRFKTQEEQVELCLTNLKRYSEDLNKYIYLMGLQ 68

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
FB|FBgn0029155	624	Men-b "Malic enzyme b" [Drosop	0.658	0.089	0.535	2.9e-11
FB|FBgn0002719	763	Men "Malic enzyme" [Drosophila	0.658	0.073	0.482	4.2e-09
ZFIN|ZDB-GENE-061013-438	585	me1 "malic enzyme 1, NADP(+)-d	0.729	0.105	0.446	4.4e-08
UNIPROTKB|F1P0Y6	576	ME1 "Malic enzyme" [Gallus gal	0.870	0.128	0.389	9e-08
UNIPROTKB|E9PNN2	151	ME3 "Malic enzyme" [Homo sapie	0.623	0.350	0.490	1.1e-07
ZFIN|ZDB-GENE-040801-147	581	me2 "malic enzyme 2, NAD(+)-de	0.670	0.098	0.421	1.5e-07
UNIPROTKB|B7Z6V0	342	ME3 "Malic enzyme" [Homo sapie	0.623	0.154	0.490	5.9e-07
UNIPROTKB|F1Q2T9	216	ME1 "Malic enzyme" [Canis lupu	0.647	0.254	0.436	1.1e-06
UNIPROTKB|F1STS4	545	ME3 "Malic enzyme" [Sus scrofa	0.623	0.097	0.490	1.3e-06
UNIPROTKB|E9PMB9	581	ME3 "Malic enzyme" [Homo sapie	0.623	0.091	0.490	1.4e-06

FB|FBgn0029155 Men-b "Malic enzyme b" [Drosophila melanogaster (taxid:7227)]

 Score = 165 (63.1 bits), Expect = 2.9e-11, P = 2.9e-11
 Identities = 30/56 (53%), Positives = 42/56 (75%)

Query:    29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSEL 84
             R + GLAF+L ERQ LGIHGL P   K Q++Q+++C+ +V R+ E LNK+ YLS+L
Sbjct:    61 RLNKGLAFTLEERQTLGIHGLQPARFKTQEEQLQLCKIAVNRYTEPLNKYLYLSDL 116

GO:0004473 "malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity" evidence=ISS;NAS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006108 "malate metabolic process" evidence=ISS

GO:0006090 "pyruvate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

FB|FBgn0002719 Men "Malic enzyme" [Drosophila melanogaster (taxid:7227)]

 Score = 146 (56.5 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 27/56 (48%), Positives = 38/56 (67%)

Query:    29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSEL 84
             R S GLAF+  ERQQLGIHG++P  ++   +Q+E CR  + R  +DL+K+ YL  L
Sbjct:   226 RYSKGLAFTHEERQQLGIHGMLPYVVREPSEQVEHCRALLARLDQDLDKYMYLISL 281

GO:0004473 "malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity" evidence=ISS;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0030431 "sleep" evidence=IMP

GO:0010941 "regulation of cell death" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

ZFIN|ZDB-GENE-061013-438 me1 "malic enzyme 1, NADP(+)-dependent, cytosolic" [Danio rerio (taxid:7955)]

 Score = 135 (52.6 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 29/65 (44%), Positives = 42/65 (64%)

Query:    24 LHSIL---RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTY 80
             +H +L   R++ G+AFSL ER QLGIHGL+PP   +QD Q+     S    +EDL+++ +
Sbjct:    29 IHVLLENQRKTEGMAFSLEERLQLGIHGLLPPCFLSQDVQVLRVLRSYELLKEDLDRYVF 88

Query:    81 LSELQ 85
             L  LQ
Sbjct:    89 LMGLQ 93

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0004470 "malic enzyme activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1P0Y6 ME1 "Malic enzyme" [Gallus gallus (taxid:9031)]

 Score = 132 (51.5 bits), Expect = 9.0e-08, P = 9.0e-08
 Identities = 30/77 (38%), Positives = 43/77 (55%)

Query:    12 EQGFPSSQVNLRLHSILRQ---SMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESV 68
             E G P      R + +LR    + G+AF+L ERQQL IHGL+PP   +QD Q+    ++ 
Sbjct:    11 EGGRPLQLTMKRGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLSQDVQVLTILKNF 70

Query:    69 RRFQEDLNKFTYLSELQ 85
              R   DL+++  L  LQ
Sbjct:    71 ERLTSDLDRYILLMSLQ 87

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0030145 "manganese ion binding" evidence=IEA

GO:0051262 "protein tetramerization" evidence=IEA

UNIPROTKB|E9PNN2 ME3 "Malic enzyme" [Homo sapiens (taxid:9606)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 26/53 (49%), Positives = 33/53 (62%)

Query:    33 GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
             G+AF+L ER QLGIHGL+PP   +QD Q+        R Q DL+K+  L  LQ
Sbjct:    62 GMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQ 114

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

ZFIN|ZDB-GENE-040801-147 me2 "malic enzyme 2, NAD(+)-dependent, mitochondrial" [Danio rerio (taxid:7955)]

 Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 24/57 (42%), Positives = 39/57 (68%)

Query:    29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
             R + G+AF+L+ERQ LGIHGL+P  I+ QD Q    ++++++  + L K+ YL  +Q
Sbjct:    33 RTNKGMAFTLKERQMLGIHGLLPSKIETQDTQAMRFQKNLKKMSDPLQKYIYLMGIQ 89

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0004470 "malic enzyme activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

UNIPROTKB|B7Z6V0 ME3 "Malic enzyme" [Homo sapiens (taxid:9606)]

 Score = 121 (47.7 bits), Expect = 5.9e-07, P = 5.9e-07
 Identities = 26/53 (49%), Positives = 33/53 (62%)

Query:    33 GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
             G+AF+L ER QLGIHGL+PP   +QD Q+        R Q DL+K+  L  LQ
Sbjct:    62 GMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQ 114

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1Q2T9 ME1 "Malic enzyme" [Canis lupus familiaris (taxid:9615)]

 Score = 114 (45.2 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 24/55 (43%), Positives = 34/55 (61%)

Query:    31 SMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
             S  LAF+L ERQQL IHGL+PP   +QD Q+    ++  R   D +++  L +LQ
Sbjct:     5 SEDLAFTLEERQQLNIHGLLPPCFISQDIQVLRIIKNFERLTSDFDRYLLLMDLQ 59

GO:0051262 "protein tetramerization" evidence=IEA

GO:0030145 "manganese ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

UNIPROTKB|F1STS4 ME3 "Malic enzyme" [Sus scrofa (taxid:9823)]

 Score = 121 (47.7 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 26/53 (49%), Positives = 33/53 (62%)

Query:    33 GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
             G+AF+L ER QLGIHGL+PP   +QD Q+        R Q DL+K+  L  LQ
Sbjct:     3 GMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQ 55

GO:0006090 "pyruvate metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004473 "malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

UNIPROTKB|E9PMB9 ME3 "Malic enzyme" [Homo sapiens (taxid:9606)]

 Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 26/53 (49%), Positives = 33/53 (62%)

Query:    33 GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
             G+AF+L ER QLGIHGL+PP   +QD Q+        R Q DL+K+  L  LQ
Sbjct:    62 GMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQ 114

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	85
PRK13529	563	PRK13529, PRK13529, malate dehydrogenase; Provisio	2e-14
PLN03129	581	PLN03129, PLN03129, NADP-dependent malic enzyme; P	2e-13
PTZ00317	559	PTZ00317, PTZ00317, NADP-dependent malic enzyme; P	2e-13

>gnl|CDD|237414 PRK13529, PRK13529, malate dehydrogenase; Provisional

 Score = 65.9 bits (162), Expect = 2e-14
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 11 DEQGFPSSQVNLRLHSILRQSM---GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRES 67
          DE+        LR  ++L   +   G AF+  ER++ G+ GL+PP ++  ++Q E     
Sbjct: 4  DEKKKRPLYTPLRGPALLNNPLLNKGTAFTEEEREEFGLEGLLPPAVETLEEQAERAYRQ 63

Query: 68 VRRFQEDLNKFTYLSELQ 85
           +    DL K  YL  LQ
Sbjct: 64 YQSKPTDLEKHIYLRNLQ 81

Length = 563

>gnl|CDD|215594 PLN03129, PLN03129, NADP-dependent malic enzyme; Provisional

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 21/53 (39%), Positives = 35/53 (66%)

Query: 33  GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           GLAF+  ER +LG+ GL+PP + +Q+ Q++   E++R  +  L K+  L +LQ
Sbjct: 54  GLAFTETERDRLGLRGLLPPAVLSQELQVKRFMENLRALESPLAKYRALMDLQ 106

Length = 581

>gnl|CDD|240357 PTZ00317, PTZ00317, NADP-dependent malic enzyme; Provisional

 Score = 63.1 bits (154), Expect = 2e-13
 Identities = 20/53 (37%), Positives = 32/53 (60%)

Query: 33 GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          G AF+  ER+ LGI GL+PPT++  +QQ+E       R +  +NK+ +L  + 
Sbjct: 31 GTAFTAEEREHLGIEGLLPPTVETLEQQVERLWTQFNRIETPINKYQFLRNIH 83

Length = 559

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	85
PRK13529	563	malate dehydrogenase; Provisional	99.89
PTZ00317	559	NADP-dependent malic enzyme; Provisional	99.88
PLN03129	581	NADP-dependent malic enzyme; Provisional	99.87
KOG1257|consensus	582		99.86

>PRK13529 malate dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-23  Score=169.84  Aligned_cols=76  Identities=32%  Similarity=0.512  Sum_probs=72.1

Q ss_pred             cCCCCCcceecccchhhhhhCC---CCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhccCChhhHHHHHHhcC
Q psy7641          10 EDEQGFPSSQVNLRLHSILRQS---MGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ   85 (85)
Q Consensus        10 ~~~~~~~~~~~~~~g~~~l~~p---KGtaFt~eER~~lgl~GLLPp~v~tle~Q~~R~~~~l~~~~t~L~Ky~yL~~L~   85 (85)
                      .+..+.....+..+|.++|+||   ||||||.+||++|||+|||||+|+|+|+|++||+.||+++++||+||+||++||
T Consensus         3 ~~~~~~~~~~~~~~G~~lL~~p~~NKgtaFt~~ER~~lgl~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~ky~~L~~L~   81 (563)
T PRK13529          3 RDEKKKRPLYTPLRGPALLNNPLLNKGTAFTEEEREEFGLEGLLPPAVETLEEQAERAYRQYQSKPTDLEKHIYLRNLQ   81 (563)
T ss_pred             cccCCCcceeecccchhhhcCcccccccCCCHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Confidence            4566777888899999999999   999999999999999999999999999999999999999999999999999986

>PTZ00317 NADP-dependent malic enzyme; Provisional

Probab=99.88  E-value=3.2e-23  Score=167.47  Aligned_cols=72  Identities=33%  Similarity=0.594  Sum_probs=68.4

Q ss_pred             CCcceecccchhhhhhCC---CCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhccCChhhHHHHHHhcC
Q psy7641          14 GFPSSQVNLRLHSILRQS---MGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ   85 (85)
Q Consensus        14 ~~~~~~~~~~g~~~l~~p---KGtaFt~eER~~lgl~GLLPp~v~tle~Q~~R~~~~l~~~~t~L~Ky~yL~~L~   85 (85)
                      +.+...+..+|.++|+||   ||||||.+||++|||+|||||+|+|+|+|++||+.+++++++||+||+||++||
T Consensus         9 ~~~~~~~~~~G~~lL~~p~~NKgtAFt~~ER~~l~l~GLlPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~   83 (559)
T PTZ00317          9 SKEKVPSNARGVDVLRNRFLNKGTAFTAEEREHLGIEGLLPPTVETLEQQVERLWTQFNRIETPINKYQFLRNIH   83 (559)
T ss_pred             cccccccCCcchhhhcCcccccccCCCHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHhhCCChHHHHHHHHHHh
Confidence            455667888999999999   999999999999999999999999999999999999999999999999999986

>PLN03129 NADP-dependent malic enzyme; Provisional

Probab=99.87  E-value=1.2e-22  Score=164.82  Aligned_cols=65  Identities=35%  Similarity=0.603  Sum_probs=63.3

Q ss_pred             ccchhhhhhCC---CCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhccCChhhHHHHHHhcC
Q psy7641          21 NLRLHSILRQS---MGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ   85 (85)
Q Consensus        21 ~~~g~~~l~~p---KGtaFt~eER~~lgl~GLLPp~v~tle~Q~~R~~~~l~~~~t~L~Ky~yL~~L~   85 (85)
                      ..+|.++|+||   ||||||.+||++|||+|||||+|+|+|+|++|||.||+++++||+||+||++||
T Consensus        39 ~~~G~~ll~~p~~NKgtaFt~~ER~~lgl~GLlP~~v~t~e~Q~~R~~~~~~~~~~~l~ky~~L~~L~  106 (581)
T PLN03129         39 VASGYDLLRDPRYNKGLAFTETERDRLGLRGLLPPAVLSQELQVKRFMENLRALESPLAKYRALMDLQ  106 (581)
T ss_pred             CCcchhhhcCcccccccCCCHHHHhhcCCccCCCCCcCCHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence            56899999999   999999999999999999999999999999999999999999999999999986

>KOG1257|consensus

Probab=99.86  E-value=4.9e-22  Score=159.90  Aligned_cols=68  Identities=44%  Similarity=0.780  Sum_probs=66.0

Q ss_pred             eecccchhhhhhCC---CCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhccCChhhHHHHHHhcC
Q psy7641          18 SQVNLRLHSILRQS---MGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ   85 (85)
Q Consensus        18 ~~~~~~g~~~l~~p---KGtaFt~eER~~lgl~GLLPp~v~tle~Q~~R~~~~l~~~~t~L~Ky~yL~~L~   85 (85)
                      ..++.+|+++++||   ||+|||.+||++|||||||||+|.|+|+|++||+.+|++.++||+||+||++||
T Consensus        25 ~~~~~~g~~ll~~p~~NKglAFTl~ERq~l~i~GLLPp~v~t~d~Q~~r~~~~l~~~~~~l~ky~~L~~L~   95 (582)
T KOG1257|consen   25 VESKKRGYDLLRDPRYNKGLAFTLEERQRLGIHGLLPPVVRTQDEQALRCMNNLRSLTSPLAKYIYLMDLQ   95 (582)
T ss_pred             cccccCChhhccCCCcccccccCHHHHHhhCccccCCccccCHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence            56789999999999   999999999999999999999999999999999999999999999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	85
1gq2_A	555	Malic Enzyme From Pigeon Liver Length = 555		2e-08
1gz3_A	554	Molecular Mechanism For The Regulation Of Human Mit		1e-07
1efk_A	584	Structure Of Human Malic Enzyme In Complex With Ket		3e-07
1qr6_A	584	Human Mitochondrial Nad(P)-Dependent Malic Enzyme L		4e-07
1gz4_A	551	Molecular Mechanism Of The Regulation Of Human Mito		4e-07
1do8_A	564	Crystal Structure Of A Closed Form Of Human Mitocho		4e-07
1llq_A	605	Crystal Structure Of Malic Enzyme From Ascaris Suum		5e-07
2aw5_A	575	Crystal Structure Of A Human Malic Enzyme Length =		3e-06

>pdb|1GQ2|A Chain A, Malic Enzyme From Pigeon Liver Length = 555

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 33 GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          G AF+L ERQQL IHGL+PP    QD Q+    ++  R   DL+++  L  LQ
Sbjct: 15 GXAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLXSLQ 67

>pdb|1GZ3|A Chain A, Molecular Mechanism For The Regulation Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme By Atp And Fumarate Length = 554

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          R + G+AF+L+ERQ LG+ GL+PP I+ QD Q      ++++    L K+ Y+  +Q
Sbjct: 14 RTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQ 70

>pdb|1EFK|A Chain A, Structure Of Human Malic Enzyme In Complex With Ketomalonate Length = 584

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          R + G AF+L+ERQ LG+ GL+PP I+ QD Q      ++++    L K+ Y+  +Q
Sbjct: 33 RTNKGXAFTLQERQXLGLQGLLPPKIETQDIQALRFHRNLKKXTSPLEKYIYIXGIQ 89

>pdb|1QR6|A Chain A, Human Mitochondrial Nad(P)-Dependent Malic Enzyme Length = 584

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          R + G AF+L+ERQ LG+ GL+PP I+ QD Q      ++++    L K+ Y+  +Q
Sbjct: 33 RTNKGXAFTLQERQXLGLQGLLPPKIETQDIQALRFHRNLKKXTSPLEKYIYIXGIQ 89

>pdb|1GZ4|A Chain A, Molecular Mechanism Of The Regulation Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme By Atp And Fumarate Length = 551

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          R + G AF+L+ERQ LG+ GL+PP I+ QD Q      ++++    L K+ Y+  +Q
Sbjct: 11 RTNKGXAFTLQERQXLGLQGLLPPKIETQDIQALRFHRNLKKXTSPLEKYIYIXGIQ 67

>pdb|1DO8|A Chain A, Crystal Structure Of A Closed Form Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme Length = 564

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 29 RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          R + G AF+L+ERQ LG+ GL+PP I+ QD Q      ++++    L K+ Y+  +Q
Sbjct: 13 RTNKGXAFTLQERQXLGLQGLLPPKIETQDIQALRFHRNLKKXTSPLEKYIYIXGIQ 69

>pdb|1LLQ|A Chain A, Crystal Structure Of Malic Enzyme From Ascaris Suum Complexed With Nicotinamide Adenine Dinucleotide Length = 605

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 29  RQSMGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
           R + G+ FSL ERQ LG+HGL+PP    Q+QQ       +R    DL ++  L  LQ
Sbjct: 47  RLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQ 103

>pdb|2AW5|A Chain A, Crystal Structure Of A Human Malic Enzyme Length = 575

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 34 LAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ 85
          LAF+L ERQQL IHGL+PP+  +Q+ Q+    ++      D +++  L +LQ
Sbjct: 39 LAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFDRYLLLMDLQ 90
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	85
1pj3_A	564	NAD-dependent malic enzyme, mitochondrial; oxidati	7e-19
1gq2_A	555	Malic enzyme; oxidoreductase, pigeon liver, NADP-d	8e-19
1o0s_A	605	NAD-ME, NAD-dependent malic enzyme; oxidoreductase	4e-18

>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Length = 564

 Score = 78.2 bits (193), Expect = 7e-19
 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)

Query: 20 VNLRLHSILRQSM---GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLN 76
          +  +   ++       G+AF+L+ERQ LG+ GL+PP I+ QD Q      ++++    L 
Sbjct: 1  IKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLE 60

Query: 77 KFTYLSELQ 85
          K+ Y+  +Q
Sbjct: 61 KYIYIMGIQ 69

>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Length = 555

 Score = 77.8 bits (192), Expect = 8e-19
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 25 HSILRQSM---GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYL 81
          + +LR      G+AF+L ERQQL IHGL+PP    QD Q+    ++  R   DL+++  L
Sbjct: 4  YEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILL 63

Query: 82 SELQ 85
            LQ
Sbjct: 64 MSLQ 67

>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Length = 605

 Score = 75.9 bits (187), Expect = 4e-18
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 20  VNLRLHSILRQSM---GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLN 76
              R   +L++     G+ FSL ERQ LG+HGL+PP    Q+QQ       +R    DL 
Sbjct: 35  PKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLA 94

Query: 77  KFTYLSELQ 85
           ++  L  LQ
Sbjct: 95  RYIQLDGLQ 103

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	85
1o0s_A	605	NAD-ME, NAD-dependent malic enzyme; oxidoreductase	99.87
1pj3_A	564	NAD-dependent malic enzyme, mitochondrial; oxidati	99.86
1gq2_A	555	Malic enzyme; oxidoreductase, pigeon liver, NADP-d	99.86

>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*

Probab=99.87  E-value=2.6e-23  Score=167.89  Aligned_cols=82  Identities=33%  Similarity=0.510  Sum_probs=72.3

Q ss_pred             eeeecccCCCCCc----------ceecccchhhhhhCC---CCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhc
Q psy7641           4 VYQLGIEDEQGFP----------SSQVNLRLHSILRQS---MGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRR   70 (85)
Q Consensus         4 ~~~~~~~~~~~~~----------~~~~~~~g~~~l~~p---KGtaFt~eER~~lgl~GLLPp~v~tle~Q~~R~~~~l~~   70 (85)
                      |||-+..+.+-..          ...+..+|.++|+||   ||||||.+||++|||+|||||+|+|+|+|++||+.++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~   88 (605)
T 1o0s_A            9 VYSHNLPPMDEKEMALYKLYRPERVTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLRE   88 (605)
T ss_dssp             TTCCSCCCCCHHHHHHHHHHSCCCCCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHH
T ss_pred             HhhcCCCcccccccccccccCCCccccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHc
Confidence            5666655554322          355678999999999   999999999999999999999999999999999999999


Q ss_pred             cCChhhHHHHHHhcC
Q psy7641          71 FQEDLNKFTYLSELQ   85 (85)
Q Consensus        71 ~~t~L~Ky~yL~~L~   85 (85)
                      +++||+||+||++|+
T Consensus        89 ~~~~l~k~~~L~~L~  103 (605)
T 1o0s_A           89 QPNDLARYIQLDGLQ  103 (605)
T ss_dssp             SSSHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHhh
Confidence            999999999999985

>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*

Probab=99.86  E-value=1e-22  Score=163.58  Aligned_cols=65  Identities=32%  Similarity=0.635  Sum_probs=62.8

Q ss_pred             ccchhhhhhCC---CCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhccCChhhHHHHHHhcC
Q psy7641          21 NLRLHSILRQS---MGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ   85 (85)
Q Consensus        21 ~~~g~~~l~~p---KGtaFt~eER~~lgl~GLLPp~v~tle~Q~~R~~~~l~~~~t~L~Ky~yL~~L~   85 (85)
                      ..+|.++|+||   ||||||.+||++|||+|||||+|+|+|+|++||+.+++++++||+||+||++|+
T Consensus         2 ~~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~   69 (564)
T 1pj3_A            2 KEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQ   69 (564)
T ss_dssp             CCCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHH
T ss_pred             CCchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhh
Confidence            46799999999   999999999999999999999999999999999999999999999999999985

>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A

Probab=99.86  E-value=1.2e-22  Score=162.99  Aligned_cols=64  Identities=41%  Similarity=0.673  Sum_probs=61.9

Q ss_pred             cchhhhhhCC---CCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhccCChhhHHHHHHhcC
Q psy7641          22 LRLHSILRQS---MGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ   85 (85)
Q Consensus        22 ~~g~~~l~~p---KGtaFt~eER~~lgl~GLLPp~v~tle~Q~~R~~~~l~~~~t~L~Ky~yL~~L~   85 (85)
                      ++|.++|+||   ||||||.+||++|||+|||||+|+|+|+|++||+.+++++++||+||+||++|+
T Consensus         1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~   67 (555)
T 1gq2_A            1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQ   67 (555)
T ss_dssp             CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred             CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhc
Confidence            3699999999   999999999999999999999999999999999999999999999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	85
d1pj3a2	259	c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent	2e-18
d1gq2a2	257	c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent	3e-18
d1o0sa2	294	c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent	9e-18

>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 259

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Malic enzyme N-domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (182), Expect = 2e-18
 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)

Query: 20 VNLRLHSILRQSM---GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLN 76
          +  +   ++       G+AF+L+ERQ LG+ GL+PP I+ QD Q      ++++    L 
Sbjct: 1  IKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLE 60

Query: 77 KFTYLSELQ 85
          K+ Y+  +Q
Sbjct: 61 KYIYIMGIQ 69

>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 257

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Malic enzyme N-domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

 Score = 73.6 bits (181), Expect = 3e-18
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 23 RLHSILRQSM---GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFT 79
          + + +LR      G+AF+L ERQQL IHGL+PP    QD Q+    ++  R   DL+++ 
Sbjct: 2  KGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYI 61

Query: 80 YLSELQ 85
           L  LQ
Sbjct: 62 LLMSLQ 67

>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 294

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Malic enzyme N-domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

 Score = 72.9 bits (179), Expect = 9e-18
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)

Query: 23  RLHSILRQSM---GLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFT 79
           R   +L++     G+ FSL ERQ LG+HGL+PP    Q+QQ       +R    DL ++ 
Sbjct: 37  RSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYI 96

Query: 80  YLSELQ 85
            L  LQ
Sbjct: 97  QLDGLQ 102

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	85
d1o0sa2	294	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	99.92
d1pj3a2	259	Mitochondrial NAD(P)-dependent malic enzyme {Human	99.92
d1gq2a2	257	Mitochondrial NAD(P)-dependent malic enzyme {Domes	99.91

>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Malic enzyme N-domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=99.92  E-value=3.8e-26  Score=170.02  Aligned_cols=68  Identities=37%  Similarity=0.587  Sum_probs=65.1

Q ss_pred             eecccchhhhhhCC---CCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhccCChhhHHHHHHhcC
Q psy7641          18 SQVNLRLHSILRQS---MGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ   85 (85)
Q Consensus        18 ~~~~~~g~~~l~~p---KGtaFt~eER~~lgl~GLLPp~v~tle~Q~~R~~~~l~~~~t~L~Ky~yL~~L~   85 (85)
                      ....++|.++|+||   ||||||.+||++|||+|||||+|+|+|+|++||+.|++++++||+||+||++||
T Consensus        32 ~~~~~rG~~lL~~p~lNKGtAFt~~ER~~l~L~GLLP~~v~tle~Qv~R~~~~~~~~~t~l~Ky~~L~~L~  102 (294)
T d1o0sa2          32 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQ  102 (294)
T ss_dssp             CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHH
T ss_pred             cCccccHHHHhcCCcccCccCCCHHHHHHcCCccCCCCCccCHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence            45577899999999   999999999999999999999999999999999999999999999999999985

>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Malic enzyme N-domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.2e-26  Score=168.14  Aligned_cols=65  Identities=32%  Similarity=0.635  Sum_probs=63.3

Q ss_pred             ccchhhhhhCC---CCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhccCChhhHHHHHHhcC
Q psy7641          21 NLRLHSILRQS---MGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ   85 (85)
Q Consensus        21 ~~~g~~~l~~p---KGtaFt~eER~~lgl~GLLPp~v~tle~Q~~R~~~~l~~~~t~L~Ky~yL~~L~   85 (85)
                      +++|.++|+||   ||||||.+||++|||+|||||+|+|+|+|++||+.+++++++||+||+||++||
T Consensus         2 ~~rG~~lL~~p~~NKGtAFt~~ER~~l~l~GLLP~~v~tle~Qv~r~~~~~~~~~t~l~Ky~yL~~L~   69 (259)
T d1pj3a2           2 KEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQ   69 (259)
T ss_dssp             CCCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHH
T ss_pred             CchHHHHhcCCCccCcCCCCHHHHHHcCCccCCCCCccCHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence            57899999999   999999999999999999999999999999999999999999999999999985

>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Malic enzyme N-domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=99.91  E-value=6.2e-26  Score=166.45  Aligned_cols=64  Identities=41%  Similarity=0.673  Sum_probs=62.4

Q ss_pred             cchhhhhhCC---CCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhccCChhhHHHHHHhcC
Q psy7641          22 LRLHSILRQS---MGLAFSLRERQQLGIHGLMPPTIKNQDQQIEVCRESVRRFQEDLNKFTYLSELQ   85 (85)
Q Consensus        22 ~~g~~~l~~p---KGtaFt~eER~~lgl~GLLPp~v~tle~Q~~R~~~~l~~~~t~L~Ky~yL~~L~   85 (85)
                      ++|.++|+||   ||||||.+||++|||+|||||+|+|+|+|++||+.+++++++||+||+||++||
T Consensus         1 krG~~lL~~p~~NKGtAFt~~ER~~l~l~GLLP~~v~tle~Qv~r~~~~~~~~~~~l~Ky~yL~~L~   67 (257)
T d1gq2a2           1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQ   67 (257)
T ss_dssp             CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred             CChHHHhcCCCccCccCCCHHHHHHcCCccCCCCCccCHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence            5899999999   999999999999999999999999999999999999999999999999999985