Psyllid ID: psy7731

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MICNGGSVIKSKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccEEEccccccHHHHHHHHHHHcccccccHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
micnggsvikskpvttATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTlrkhhfgkycpIFILimgvfppltsgiISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL
Flexible Loop (DISEMBL)
micnggsvikskpvttATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL
Low Complexity Region (SEG)
MICNGGSVIKSKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL
Disordered region (IsUnstruct)
*******VIKSKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILA**
Disordered Region (DISOPRED)
*********************SIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL
Disordered Region (DISEMBL)
MICNGGSVIKSKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL
Disordered Region (DISPRO)
*IC*GGSVIKSKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MICNGGSVIKSKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	139	2.2.26 [Sep-21-2011]
Q7TQ79	132	Transmembrane protein 170	yes	N/A	0.942	0.992	0.416	2e-22
P86050	132	Transmembrane protein 170	yes	N/A	0.942	0.992	0.416	2e-22
Q5T4T1	132	Transmembrane protein 170	yes	N/A	0.942	0.992	0.416	3e-22
Q9D342	144	Transmembrane protein 170	no	N/A	0.784	0.756	0.467	5e-22
Q8WVE7	144	Transmembrane protein 170	no	N/A	0.784	0.756	0.477	7e-22
Q6DF87	142	Transmembrane protein 170	N/A	N/A	0.784	0.767	0.477	1e-21
Q5ZM31	138	Transmembrane protein 170	yes	N/A	0.755	0.760	0.485	3e-21
A3KPL7	145	Transmembrane protein 170	yes	N/A	0.791	0.758	0.445	8e-18

>sp|Q7TQ79|T170B_RAT Transmembrane protein 170B OS=Rattus norvegicus GN=Tmem170b PE=2 SV=2

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 1/132 (0%)

Query: 9   IKSKPVTTATILSSIADVLS-FANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGT 67
           ++++    + I  S+  VLS +A+   L    EMW+ IFLWALFSS+FVH  A ++ F  
Sbjct: 1   MRAEGADHSMINLSVQQVLSLWAHGTVLRNLTEMWYWIFLWALFSSLFVHGAAGVLMFVM 60

Query: 68  LRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLS 127
           L++H  G+   I  + +G    +T  +I+SA +A +Y  A  +MAP+ A+ WGVGQTVL+
Sbjct: 61  LQRHRQGRVLSIIAVSIGFLASVTGAMITSAAVAGIYRVAGKNMAPLEALVWGVGQTVLT 120

Query: 128 AAVGFTRILATL 139
             + F+RILATL
Sbjct: 121 LIISFSRILATL 132

Rattus norvegicus (taxid: 10116)

>sp|P86050|T170B_MOUSE Transmembrane protein 170B OS=Mus musculus GN=Tmem170b PE=3 SV=1

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 1/132 (0%)

Query: 9   IKSKPVTTATILSSIADVLS-FANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGT 67
           ++++    + I  S+  VLS +A+   L    EMW+ IFLWALFSS+FVH  A ++ F  
Sbjct: 1   MRAEGADHSMINLSVQQVLSLWAHGTVLRNLTEMWYWIFLWALFSSLFVHGAAGVLMFVM 60

Query: 68  LRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLS 127
           L++H  G+   I  + +G    +T  +I+SA +A +Y  A  +MAP+ A+ WGVGQTVL+
Sbjct: 61  LQRHRQGRVISIIAVSIGFLASVTGAMITSAAVAGIYRVAGKNMAPLEALVWGVGQTVLT 120

Query: 128 AAVGFTRILATL 139
             + F+RILATL
Sbjct: 121 LIISFSRILATL 132

Mus musculus (taxid: 10090)

>sp|Q5T4T1|T170B_HUMAN Transmembrane protein 170B OS=Homo sapiens GN=TMEM170B PE=2 SV=1

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 1/132 (0%)

Query: 9   IKSKPVTTATILSSIADVLS-FANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGT 67
           +K++    + I  S+  VLS +A+   L    EMW+ IFLWALFSS+FVH  A ++ F  
Sbjct: 1   MKAEGGDHSMINLSVQQVLSLWAHGTVLRNLTEMWYWIFLWALFSSLFVHGAAGVLMFVM 60

Query: 68  LRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLS 127
           L++H  G+   +  + +G    +T  +I+SA +A +Y  A  +MAP+ A+ WGVGQTVL+
Sbjct: 61  LQRHRQGRVISVIAVSIGFLASVTGAMITSAAVAGIYRVAGKNMAPLEALVWGVGQTVLT 120

Query: 128 AAVGFTRILATL 139
             + F+RILATL
Sbjct: 121 LIISFSRILATL 132

Homo sapiens (taxid: 9606)

>sp|Q9D342|T170A_MOUSE Transmembrane protein 170A OS=Mus musculus GN=Tmem170a PE=2 SV=1

 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 70/109 (64%)

Query: 31  NYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPL 90
           N  +L +F EMW+ +FLWAL SS+F H  A ++A  TLR H +G++  + IL+MG+  P+
Sbjct: 36  NSTSLCSFPEMWYGVFLWALMSSVFFHVPAGLLALFTLRHHKYGRFMSVSILLMGIVGPI 95

Query: 91  TSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
           T+GI++SA IA VY  A   M P  A+  G GQT     V F R+LATL
Sbjct: 96  TAGILTSAAIAGVYRAAGKEMIPFEALTLGTGQTFCVVVVSFLRVLATL 144

Mus musculus (taxid: 10090)

>sp|Q8WVE7|T170A_HUMAN Transmembrane protein 170A OS=Homo sapiens GN=TMEM170A PE=2 SV=1

 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 70/109 (64%)

Query: 31  NYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPL 90
           N  +L +F EMW+ +FLWAL SS+F H  A ++A  TLR H +G++  + IL+MG+  P+
Sbjct: 36  NSTSLCSFPEMWYGVFLWALVSSLFFHVPAGLLALFTLRHHKYGRFMSVSILLMGIVGPI 95

Query: 91  TSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
           T+GI++SA IA VY  A   M P  A+  G GQT     V F RILATL
Sbjct: 96  TAGILTSAAIAGVYRAAGKEMIPFEALTLGTGQTFCVLVVSFLRILATL 144

Homo sapiens (taxid: 9606)

>sp|Q6DF87|T170A_XENLA Transmembrane protein 170A OS=Xenopus laevis GN=tmem170a PE=2 SV=1

 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 69/109 (63%)

Query: 31  NYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPL 90
              TL +F EMW+ +FLWAL SS+F H  A ++A  TLR H +G++  + I +MGV  P+
Sbjct: 34  QRATLCSFPEMWYGVFLWALVSSLFFHIPAGLLALFTLRHHKYGRFMSVGIFLMGVLGPI 93

Query: 91  TSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
           ++GI++SA IA VY  A   M P  A+  GVGQT     V F RILATL
Sbjct: 94  SAGILTSAAIAGVYKAAGKEMIPFEALVLGVGQTFCVLIVSFLRILATL 142

Xenopus laevis (taxid: 8355)

>sp|Q5ZM31|T170A_CHICK Transmembrane protein 170A OS=Gallus gallus GN=TMEM170A PE=2 SV=1

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 70/105 (66%)

Query: 35  LTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGI 94
           L+TF EMW+ +FLWAL SS+  H  AA++A  TLR H +G++  + +L+MG+  P+T+GI
Sbjct: 34  LSTFPEMWYGVFLWALVSSLSFHVPAALLALFTLRHHKYGRFMSVSLLLMGIVGPITAGI 93

Query: 95  ISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
           ++SA IA VY  A   M P  A+ + VGQT     V F RILATL
Sbjct: 94  LTSAAIAGVYRAAGKKMIPFEALIFEVGQTFCVVVVSFLRILATL 138

Gallus gallus (taxid: 9031)

>sp|A3KPL7|T170A_DANRE Transmembrane protein 170A OS=Danio rerio GN=tmem170a PE=2 SV=1

 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 72/110 (65%)

Query: 30  ANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPP 89
            N  +L  F+EMW+ +FLWA+ SS+  H  AA++A  TLR+H   ++ P+ IL+MG+  P
Sbjct: 36  GNNTSLCDFSEMWYGVFLWAVVSSLIFHLPAALLALATLRRHKVARFFPLGILLMGIIGP 95

Query: 90  LTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
           L  G+++SA IA VY  A  SM  + A+ +GVGQ++    + F RILATL
Sbjct: 96  LFGGVLTSAAIAGVYKAAGKSMFSLEALVFGVGQSLFIFIISFLRILATL 145

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
193594137	131	PREDICTED: transmembrane protein 170A-li	0.863	0.916	0.658	3e-38
24652545	128	CG12341 [Drosophila melanogaster] gi|194	0.863	0.937	0.591	4e-35
125811062	130	GA11566 [Drosophila pseudoobscura pseudo	0.863	0.923	0.591	8e-35
307199458	133	Transmembrane protein 170A [Harpegnathos	0.776	0.812	0.657	1e-34
195429593	128	GK19334 [Drosophila willistoni] gi|19415	0.863	0.937	0.6	1e-34
194758020	131	GF11085 [Drosophila ananassae] gi|190622	0.863	0.916	0.583	1e-34
195383724	130	GJ20124 [Drosophila virilis] gi|19414537	0.920	0.984	0.550	3e-34
307175949	134	Transmembrane protein 170A [Camponotus f	0.762	0.791	0.669	4e-34
195121544	130	GI19166 [Drosophila mojavensis] gi|19391	0.920	0.984	0.565	4e-34
332022368	134	Transmembrane protein 170A [Acromyrmex e	0.776	0.805	0.648	7e-34

>gi|193594137|ref|XP_001952759.1| PREDICTED: transmembrane protein 170A-like [Acyrthosiphon pisum]

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 79/120 (65%), Positives = 97/120 (80%)

Query: 20  LSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPI 79
           L  I++V+  A+   L+TF EMW+Q FLWALFSS  VHT AAIIAF TL KH+FGK+ P+
Sbjct: 12  LVPISNVIGLASQRPLSTFPEMWYQTFLWALFSSAIVHTVAAIIAFATLHKHNFGKFFPL 71

Query: 80  FILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
           FIL++G+F PL+SGI+SSA IA VY  + + M P+YAMFWGVGQT+LSAAVGFTRILATL
Sbjct: 72  FILLVGIFAPLSSGIVSSATIAFVYRASSIQMQPLYAMFWGVGQTLLSAAVGFTRILATL 131

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24652545|ref|NP_610612.1| CG12341 [Drosophila melanogaster] gi|194884171|ref|XP_001976169.1| GG22718 [Drosophila erecta] gi|195333231|ref|XP_002033295.1| GM20493 [Drosophila sechellia] gi|195483633|ref|XP_002090367.1| GE13074 [Drosophila yakuba] gi|195582272|ref|XP_002080952.1| GD25956 [Drosophila simulans] gi|21430818|gb|AAM51087.1| SD17342p [Drosophila melanogaster] gi|21627513|gb|AAF58751.2| CG12341 [Drosophila melanogaster] gi|190659356|gb|EDV56569.1| GG22718 [Drosophila erecta] gi|194125265|gb|EDW47308.1| GM20493 [Drosophila sechellia] gi|194176468|gb|EDW90079.1| GE13074 [Drosophila yakuba] gi|194192961|gb|EDX06537.1| GD25956 [Drosophila simulans] gi|220950278|gb|ACL87682.1| CG12341-PA [synthetic construct] gi|220959278|gb|ACL92182.1| CG12341-PA [synthetic construct]

 Score =  152 bits (384), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 93/120 (77%)

Query: 20  LSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPI 79
           L +IADV+   +   L TF EMW+ +FLWALFSSIF+HT AA++AF TLRKH FG++  I
Sbjct: 9   LDTIADVMGLRSQARLNTFREMWYHVFLWALFSSIFIHTCAAVVAFFTLRKHKFGRFFSI 68

Query: 80  FILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
            IL+MG   P +SGIISSA+IA V+  + + M+P+YAM WG+GQT++SA +GFTRILATL
Sbjct: 69  LILVMGFLSPASSGIISSAVIAFVHRASSLPMSPIYAMIWGLGQTIVSACLGFTRILATL 128

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125811062|ref|XP_001361736.1| GA11566 [Drosophila pseudoobscura pseudoobscura] gi|195153529|ref|XP_002017678.1| GL17178 [Drosophila persimilis] gi|54636912|gb|EAL26315.1| GA11566 [Drosophila pseudoobscura pseudoobscura] gi|194113474|gb|EDW35517.1| GL17178 [Drosophila persimilis]

 Score =  151 bits (382), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 93/120 (77%)

Query: 20  LSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPI 79
           L +IADV+   +   L TF EMW+ +FLWALFSSIF+HT AA++AF TLRKH FG++  I
Sbjct: 11  LDTIADVMGLRSQARLNTFREMWYHLFLWALFSSIFIHTCAALVAFVTLRKHKFGRFFSI 70

Query: 80  FILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
            IL+MG   P +SGIISSA+IA V+  + + M+P+YAM WG+GQT++SA +GFTRILATL
Sbjct: 71  LILVMGFLSPASSGIISSAVIAFVHRASSLPMSPIYAMVWGLGQTIVSACLGFTRILATL 130

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307199458|gb|EFN80071.1| Transmembrane protein 170A [Harpegnathos saltator]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/108 (65%), Positives = 87/108 (80%)

Query: 32  YCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLT 91
           Y  LT+FAEMW+QIFLWALFSSIFVHT A  I F TLR+H +GK+ P+ I+IMGV  PLT
Sbjct: 26  YMPLTSFAEMWYQIFLWALFSSIFVHTIAGAICFATLRQHKYGKFFPLLIIIMGVLLPLT 85

Query: 92  SGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
           SG++SSA +A VY  +   M P+YA+FWG+GQTV++A VGFTRILATL
Sbjct: 86  SGVVSSAAVAFVYRASGYQMPPLYALFWGIGQTVVAACVGFTRILATL 133

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195429593|ref|XP_002062842.1| GK19334 [Drosophila willistoni] gi|194158927|gb|EDW73828.1| GK19334 [Drosophila willistoni]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/120 (60%), Positives = 91/120 (75%)

Query: 20  LSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPI 79
           L +IADV+       L TF EMW+ +FLWALFSSIF+HT AA++AF TLRKH FG++  I
Sbjct: 9   LDTIADVMGLRTQARLNTFREMWYHVFLWALFSSIFIHTCAALVAFVTLRKHKFGRFFSI 68

Query: 80  FILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
            IL+MG   P +SGIISSA+IA V+  + + M+P+YAM WG+GQT LSA +GFTRILATL
Sbjct: 69  LILVMGFLSPASSGIISSAVIAFVHRASALPMSPIYAMVWGLGQTCLSACLGFTRILATL 128

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194758020|ref|XP_001961260.1| GF11085 [Drosophila ananassae] gi|190622558|gb|EDV38082.1| GF11085 [Drosophila ananassae]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 93/120 (77%)

Query: 20  LSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPI 79
           L +IADV+   +   L TF EMW+ +FLWALFSSIF+HT AA++AF TLRKH FG++  I
Sbjct: 12  LDTIADVMGLRSQARLNTFREMWYHVFLWALFSSIFIHTCAAVVAFFTLRKHKFGRFFSI 71

Query: 80  FILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
            IL+MG   P +SGIISSA+I+ V+  + + M+P+YAM WG+GQT++SA +GFTRILATL
Sbjct: 72  LILVMGFLSPASSGIISSAVISFVHRASSLPMSPIYAMVWGLGQTIVSACLGFTRILATL 131

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195383724|ref|XP_002050576.1| GJ20124 [Drosophila virilis] gi|194145373|gb|EDW61769.1| GJ20124 [Drosophila virilis]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/129 (55%), Positives = 95/129 (73%), Gaps = 1/129 (0%)

Query: 11  SKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRK 70
           S+P+ T   L +I DV+   +   L TF EMW+ +FLWA FSSIF+HT AA++AF TLR+
Sbjct: 3   SEPIDTDE-LDAIVDVVGLRSQARLNTFREMWYHVFLWAFFSSIFIHTCAALVAFVTLRR 61

Query: 71  HHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAV 130
           H FG++  I IL+MG   P +SGIISSA+IA V+  + + M+P+YA+FWGVGQT+ SA +
Sbjct: 62  HKFGRFFSILILVMGFVSPASSGIISSAVIAFVHRASSLPMSPIYALFWGVGQTIFSACL 121

Query: 131 GFTRILATL 139
           GF RILATL
Sbjct: 122 GFFRILATL 130

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307175949|gb|EFN65759.1| Transmembrane protein 170A [Camponotus floridanus]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 71/106 (66%), Positives = 85/106 (80%)

Query: 34  TLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSG 93
           TLT+FAEMW+QIFLWALFSSIFVHT A  I F TLR+H +GK+ P+ I+IMGV  PLTSG
Sbjct: 29  TLTSFAEMWYQIFLWALFSSIFVHTIAGAICFATLRQHKYGKFFPLLIIIMGVLLPLTSG 88

Query: 94  IISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
           +ISSA +A VY  +   M P+YA+FWG+GQTV+   VGFTRILATL
Sbjct: 89  VISSAAVAFVYRASGYQMPPLYALFWGIGQTVVPVCVGFTRILATL 134

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195121544|ref|XP_002005280.1| GI19166 [Drosophila mojavensis] gi|193910348|gb|EDW09215.1| GI19166 [Drosophila mojavensis]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/129 (56%), Positives = 95/129 (73%), Gaps = 1/129 (0%)

Query: 11  SKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRK 70
           S+P  T   L +I DV+   +   L TF EMW+ IFLWALFSSIF+HT AA++AF TLR+
Sbjct: 3   SEPYDTDE-LDAIVDVVGLRSQSRLNTFREMWYHIFLWALFSSIFIHTCAALVAFVTLRR 61

Query: 71  HHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAV 130
           H FG++  I IL+MG   P +SGIISSA+IA V+  + + M+P+YA+FWGVGQT+ SA +
Sbjct: 62  HKFGRFFSILILVMGFVSPASSGIISSAVIAFVHVASSLPMSPIYALFWGVGQTIFSACL 121

Query: 131 GFTRILATL 139
           GF RILATL
Sbjct: 122 GFFRILATL 130

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022368|gb|EGI62680.1| Transmembrane protein 170A [Acromyrmex echinatior]

 Score =  148 bits (373), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 70/108 (64%), Positives = 85/108 (78%)

Query: 32  YCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLT 91
           Y  LT+FAEMW+QIFLWALFSSIFVHT A  I F TLR+H +GK+ P+ I+IMGV  PLT
Sbjct: 27  YMPLTSFAEMWYQIFLWALFSSIFVHTIAGAICFATLRQHKYGKFFPLLIIIMGVLLPLT 86

Query: 92  SGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
           SG++SSA +A VY  +   M P+YA+FWG+GQTV+   VGFTRILATL
Sbjct: 87  SGVVSSAAVAFVYRASGYQMPPLYALFWGIGQTVVPVCVGFTRILATL 134

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
UNIPROTKB|Q8WVE7	144	TMEM170A "Transmembrane protei	0.978	0.944	0.404	1.8e-23
MGI|MGI:106426	144	Tmem170 "transmembrane protein	0.971	0.937	0.4	1.8e-23
MGI|MGI:3647046	132	Tmem170b "transmembrane protei	0.848	0.893	0.453	4.8e-23
RGD|1561506	132	Tmem170b "transmembrane protei	0.848	0.893	0.453	4.8e-23
UNIPROTKB|Q5T4T1	132	TMEM170B "Transmembrane protei	0.848	0.893	0.445	6.1e-23
UNIPROTKB|Q5ZM31	138	TMEM170A "Transmembrane protei	0.942	0.949	0.392	1.3e-22
ZFIN|ZDB-GENE-040426-1622	145	tmem170a "transmembrane protei	0.784	0.751	0.449	9e-22
WB|WBGene00009673	143	F43G9.13 [Caenorhabditis elega	0.705	0.685	0.323	3.6e-09
DICTYBASE|DDB_G0290053	128	tmem170 "TMEM170 family protei	0.697	0.757	0.206	8.1e-05

UNIPROTKB|Q8WVE7 TMEM170A "Transmembrane protein 170A" [Homo sapiens (taxid:9606)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 55/136 (40%), Positives = 81/136 (59%)

Query:     4 NGGSVIKSKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAII 63
             +GGS    + + +  ++  + +     N  +L +F EMW+ +FLWAL SS+F H  A ++
Sbjct:     9 SGGSAGLLQQILSLKVVPRVGNGTLCPNSTSLCSFPEMWYGVFLWALVSSLFFHVPAGLL 68

Query:    64 AFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQ 123
             A  TLR H +G++  + IL+MG+  P+T+GI++SA IA VY  A   M P  A+  G GQ
Sbjct:    69 ALFTLRHHKYGRFMSVSILLMGIVGPITAGILTSAAIAGVYRAAGKEMIPFEALTLGTGQ 128

Query:   124 TVLSAAVGFTRILATL 139
             T     V F RILATL
Sbjct:   129 TFCVLVVSFLRILATL 144

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:106426 Tmem170 "transmembrane protein 170" [Mus musculus (taxid:10090)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 54/135 (40%), Positives = 80/135 (59%)

Query:     5 GGSVIKSKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIA 64
             GGS    + + +  ++  + +     N  +L +F EMW+ +FLWAL SS+F H  A ++A
Sbjct:    10 GGSAGLLQQILSLKLVPRVGNGTLCPNSTSLCSFPEMWYGVFLWALMSSVFFHVPAGLLA 69

Query:    65 FGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQT 124
               TLR H +G++  + IL+MG+  P+T+GI++SA IA VY  A   M P  A+  G GQT
Sbjct:    70 LFTLRHHKYGRFMSVSILLMGIVGPITAGILTSAAIAGVYRAAGKEMIPFEALTLGTGQT 129

Query:   125 VLSAAVGFTRILATL 139
                  V F R+LATL
Sbjct:   130 FCVVVVSFLRVLATL 144

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:3647046 Tmem170b "transmembrane protein 170B" [Mus musculus (taxid:10090)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 54/119 (45%), Positives = 77/119 (64%)

Query:    22 SIADVLS-FANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIF 80
             S+  VLS +A+   L    EMW+ IFLWALFSS+FVH  A ++ F  L++H  G+   I 
Sbjct:    14 SVQQVLSLWAHGTVLRNLTEMWYWIFLWALFSSLFVHGAAGVLMFVMLQRHRQGRVISII 73

Query:    81 ILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
              + +G    +T  +I+SA +A +Y  A  +MAP+ A+ WGVGQTVL+  + F+RILATL
Sbjct:    74 AVSIGFLASVTGAMITSAAVAGIYRVAGKNMAPLEALVWGVGQTVLTLIISFSRILATL 132

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1561506 Tmem170b "transmembrane protein 170B" [Rattus norvegicus (taxid:10116)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 54/119 (45%), Positives = 77/119 (64%)

Query:    22 SIADVLS-FANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIF 80
             S+  VLS +A+   L    EMW+ IFLWALFSS+FVH  A ++ F  L++H  G+   I 
Sbjct:    14 SVQQVLSLWAHGTVLRNLTEMWYWIFLWALFSSLFVHGAAGVLMFVMLQRHRQGRVLSII 73

Query:    81 ILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
              + +G    +T  +I+SA +A +Y  A  +MAP+ A+ WGVGQTVL+  + F+RILATL
Sbjct:    74 AVSIGFLASVTGAMITSAAVAGIYRVAGKNMAPLEALVWGVGQTVLTLIISFSRILATL 132

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5T4T1 TMEM170B "Transmembrane protein 170B" [Homo sapiens (taxid:9606)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 53/119 (44%), Positives = 77/119 (64%)

Query:    22 SIADVLS-FANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIF 80
             S+  VLS +A+   L    EMW+ IFLWALFSS+FVH  A ++ F  L++H  G+   + 
Sbjct:    14 SVQQVLSLWAHGTVLRNLTEMWYWIFLWALFSSLFVHGAAGVLMFVMLQRHRQGRVISVI 73

Query:    81 ILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
              + +G    +T  +I+SA +A +Y  A  +MAP+ A+ WGVGQTVL+  + F+RILATL
Sbjct:    74 AVSIGFLASVTGAMITSAAVAGIYRVAGKNMAPLEALVWGVGQTVLTLIISFSRILATL 132

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5ZM31 TMEM170A "Transmembrane protein 170A" [Gallus gallus (taxid:9031)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 53/135 (39%), Positives = 85/135 (62%)

Query:     5 GGSVIKSKPVTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIA 64
             GG +++   + +  ++  + +  ++++   L+TF EMW+ +FLWAL SS+  H  AA++A
Sbjct:     8 GGGLLQQ--ILSLRLVPRVGNGTTYSS--PLSTFPEMWYGVFLWALVSSLSFHVPAALLA 63

Query:    65 FGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQT 124
               TLR H +G++  + +L+MG+  P+T+GI++SA IA VY  A   M P  A+ + VGQT
Sbjct:    64 LFTLRHHKYGRFMSVSLLLMGIVGPITAGILTSAAIAGVYRAAGKKMIPFEALIFEVGQT 123

Query:   125 VLSAAVGFTRILATL 139
                  V F RILATL
Sbjct:   124 FCVVVVSFLRILATL 138

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040426-1622 tmem170a "transmembrane protein 170A" [Danio rerio (taxid:7955)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 49/109 (44%), Positives = 72/109 (66%)

Query:    31 NYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPL 90
             N  +L  F+EMW+ +FLWA+ SS+  H  AA++A  TLR+H   ++ P+ IL+MG+  PL
Sbjct:    37 NNTSLCDFSEMWYGVFLWAVVSSLIFHLPAALLALATLRRHKVARFFPLGILLMGIIGPL 96

Query:    91 TSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
               G+++SA IA VY  A  SM  + A+ +GVGQ++    + F RILATL
Sbjct:    97 FGGVLTSAAIAGVYKAAGKSMFSLEALVFGVGQSLFIFIISFLRILATL 145

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00009673 F43G9.13 [Caenorhabditis elegans (taxid:6239)]

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 33/102 (32%), Positives = 52/102 (50%)

Query:    42 WWQI----FLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISS 97
             WW+I    FLW   S + +   A I++  TLRKH +  + PI  +IM    P   G  +S
Sbjct:    42 WWEITLSIFLWMSLSFMVISLGATILSLFTLRKHPYVCFIPIPFIIMMFIIPFVFGAPTS 101

Query:    98 AMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
              ++A+    ++ +++  Y    G+ QT+L      TRI ATL
Sbjct:   102 MVLALAMYASKNAVSTWYCAIMGIIQTLLIFVTSVTRIHATL 143

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0290053 tmem170 "TMEM170 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 20/97 (20%), Positives = 43/97 (44%)

Query:    38 FAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISS 97
             + ++W  I  W    +   +  +  +A   L+K  F  + PIF  + G+   +  G IS+
Sbjct:    27 YGDIWLAITFWCTVVTTISYLISGFVASFVLKKSKFSPFIPIFTAMYGMAIGICYGGISA 86

Query:    98 AMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTR 134
              +++ +Y      ++    +  GVG  ++     FT+
Sbjct:    87 LILSAIYVSGSFLLSWYQGIICGVGLAIVHLLFAFTQ 123


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.137   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      139       139   0.00091  102 3  11 21  0.44    30
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  574 (61 KB)
  Total size of DFA:  139 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:02
  No. of threads or processors used:  24
  Search cpu time:  13.17u 0.07s 13.24t   Elapsed:  00:00:10
  Total cpu time:  13.18u 0.07s 13.25t   Elapsed:  00:00:12
  Start:  Thu Aug 15 11:49:06 2013   End:  Thu Aug 15 11:49:18 2013

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5T4T1	T170B_HUMAN	No assigned EC number	0.4166	0.9424	0.9924	yes	N/A
P86050	T170B_MOUSE	No assigned EC number	0.4166	0.9424	0.9924	yes	N/A
Q7TQ79	T170B_RAT	No assigned EC number	0.4166	0.9424	0.9924	yes	N/A
Q5ZM31	T170A_CHICK	No assigned EC number	0.4857	0.7553	0.7608	yes	N/A
A3KPL7	T170A_DANRE	No assigned EC number	0.4454	0.7913	0.7586	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	139
pfam10190	105	pfam10190, Tmemb_170, Putative transmembrane prote	6e-39

>gnl|CDD|150812 pfam10190, Tmemb_170, Putative transmembrane protein 170

 Score =  126 bits (319), Expect = 6e-39
 Identities = 65/105 (61%), Positives = 81/105 (77%)

Query: 35  LTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGI 94
           L TF+EMW+ +FLWALFSS+FVH  A ++AF TLRKH FG++  IFIL+MGV  PLT G+
Sbjct: 1   LCTFSEMWYHVFLWALFSSLFVHIAAGLLAFVTLRKHKFGRFFSIFILVMGVLSPLTGGV 60

Query: 95  ISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
           I+SA IA VY  A   M+P+ A+ WGVGQT+LS  + FTRILATL
Sbjct: 61  ITSAAIAGVYRAAGKPMSPIEALVWGVGQTILSLCISFTRILATL 105

Tmem170 is a family of putative transmembrane proteins conserved from nematodes to humans. The protein is only of approximately 130 amino acids in length. The function is unknown. Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	139
PF10190	105	Tmemb_170: Putative transmembrane protein 170; Int	100.0
KOG4349|consensus	143		100.0

>PF10190 Tmemb_170: Putative transmembrane protein 170; InterPro: IPR019334 This entry represents a group of putative transmembrane proteins conserved from nematodes to humans

Probab=100.00  E-value=8.5e-46  Score=272.41  Aligned_cols=105  Identities=63%  Similarity=1.020  Sum_probs=104.1

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHhHhhHHHHHHHHHHHHHHHHhCCccchHH
Q psy7731          35 LTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPV  114 (139)
Q Consensus        35 L~~~~diW~ft~lWtLis~~~~h~~agl~A~~~lrrhk~~~~ipi~yll~G~l~~l~~G~Itg~~Ia~VY~Ag~~~Mstw  114 (139)
                      |++|+||||++|+||+++|.++|.+||++|++++||||++|++|+++++||+++|+++|+++|++||+|||||+|+||||
T Consensus         1 ~~~f~emW~~iflW~l~ss~~vh~~A~liA~~~lRkhk~~~f~pi~~l~mg~l~p~~~G~itSa~IA~vY~a~~~~M~~~   80 (105)
T PF10190_consen    1 LCDFSEMWYWIFLWALFSSIFVHLIAGLIAFFTLRKHKFGRFIPIVILLMGVLGPLTGGSITSAAIAGVYRAAGFRMSTW   80 (105)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCcccHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhcC
Q psy7731         115 YAMFWGVGQTVLSAAVGFTRILATL  139 (139)
Q Consensus       115 ip~~wGv~qtl~~ii~SFsrilaTL  139 (139)
                      +|++||++||++.+++|||||||||
T Consensus        81 ~a~vwGvgqt~~~~i~sFtRilatL  105 (105)
T PF10190_consen   81 EAMVWGVGQTILHLIISFTRILATL  105 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999998

The protein is only approximately 130 amino acids in length. The function is unknown.

>KOG4349|consensus

Probab=100.00  E-value=5.8e-40  Score=248.91  Aligned_cols=126  Identities=39%  Similarity=0.592  Sum_probs=116.6

Q ss_pred             cccCCCCchhhhhcc-c-cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHhHhhHH
Q psy7731          14 VTTATILSSIADVLS-F-ANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLT   91 (139)
Q Consensus        14 ~~~tp~fpSl~~~l~-l-~~~~~L~~~~diW~ft~lWtLis~~~~h~~agl~A~~~lrrhk~~~~ipi~yll~G~l~~l~   91 (139)
                      .-|+-+.+|.+.+-+ + .++++|++|+||||.+|+|+++|++++|+.|+++|++++||||++||+|+.+++||++.|++
T Consensus        16 ~~~~l~l~~~~~v~g~L~~s~~~ln~f~Emwy~vFLWal~Ss~fih~~A~ilalFTLRkHkygrF~si~iliMgfi~P~~   95 (143)
T KOG4349|consen   16 NYTNLTLESTYSVAGALLLSGKYLNDFWEMWYSVFLWALLSSMFIHLGATILALFTLRKHKYGRFISIPILIMGFIIPFV   95 (143)
T ss_pred             ccchhhHHhHHHHHhhhccCcchhccHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcCccceeeehHHHHHHHHHHHH
Confidence            345556666666644 2 23599999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHhhhhhhhcC
Q psy7731          92 SGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL  139 (139)
Q Consensus        92 ~G~Itg~~Ia~VY~Ag~~~Mstwip~~wGv~qtl~~ii~SFsrilaTL  139 (139)
                      +|.++|+++|.+|||++++||||++++||.+||++.++.||+||+|||
T Consensus        96 ~Gi~tS~viA~~~~As~~~ms~~y~~i~G~~QT~~i~v~s~tRI~ATL  143 (143)
T KOG4349|consen   96 FGIPTSMVLALAMYASKNAVSTWYCAIMGIIQTLLIFVTSVTRIHATL  143 (143)
T ss_pred             hcchHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00