Psyllid ID: psy7777

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
MRAIEAATVKLPPADPTKEISGTRSEQRVKMNRNGRNLQKRSKYRQSQQPSQLNAIEAATVKLPPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRNLAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccHHHHHHHHHHHHHHHcccHHccccccccccccccccccccccHHHHHHHHcccccccEEEcccccHHHHHHcccccccccccccccccEEEcccccccEEEEEccccEEEEEEccccccccccccEEEEccccccccccccccccccHHHccccccccccEEEccEEEEcccHHHHccccccccccHHHHHHHHHHHHHHccHHHHHccc
cccccccccccHHHHHHHHHccccHHHcccccccccEcHHHHHHHHHcccccccccccccccccccccccccccccccHcccHHHHHHHHHHHHHHHHcccHHHHccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccEccEEcEccccccEEcccccEEEEcEEEEEEcEEEccEEEccEEccHcHHHccccEEEEEcccccccccccccccccHHHHHHHHHcccccEEEccEEEEEcHEHEEEccccEEEccHHHHHHHHHHHHHHHcHHHHEccc
MRAIEAAtvklppadptkeisgtrsEQRVKMNRngrnlqkrskyrqsqqpsqLNAIEAAtvklppadptkeisgtrsEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEidmrkesntsmpvpapcngiieerfvedgatvKAGQQLfkikptvctpnskyraekklrpgrelnsgppeckpsvavatpkglvvPVIRnlaiedsdggtftisnggvfgsllgtpiinppqsailgmhgtferpvaikgqvvVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL
mraieaatvklppadptkeisgtrseqrvkmnrngrnlqkrskyrqsqqpsqLNAIEAatvklppadptkeisgtrseqrvkMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGqqlfkikptvctpnskyraekklrpgrelnsgppeckpsvavatpkglVVPVIRNLAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKikaavedpriilagl
MRAIEAATVKLPPADPTKEISGTRSEQRVKMNRNGRNLQKRSKYRQSQQPSQLNAIEAATVKLPPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRNLAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL
****************************************************************************************************************************PCNGIIEERFVEDGATVKAGQQLFKIKPTVCT****************************AVATPKGLVVPVIRNLAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIIL***
************************************************************************************RMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRNLAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL
MRAIEAATVKLPPADPTKEISGTRSEQRVKMNRNGR****************LNAIEAATVKLPPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRNLAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL
********************************RNGRNLQKRSKYRQSQ********************************VKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRNLAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRAIEAATVKLPPADPTKEISGTRSEQRVKMNRNGRNLQKRSKYRQSQQPSQLNAIEAATVKLPPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRNLAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query294 2.2.26 [Sep-21-2011]
Q01205454 Dihydrolipoyllysine-resid yes N/A 0.744 0.482 0.554 3e-64
P36957453 Dihydrolipoyllysine-resid yes N/A 0.755 0.490 0.564 7e-64
Q9D2G2454 Dihydrolipoyllysine-resid yes N/A 0.744 0.482 0.550 2e-63
Q9N0F1455 Dihydrolipoyllysine-resid yes N/A 0.744 0.481 0.542 4e-62
P11179455 Dihydrolipoyllysine-resid yes N/A 0.792 0.512 0.539 8e-62
Q90512409 Dihydrolipoyllysine-resid N/A N/A 0.731 0.525 0.539 9e-62
P19262463 Dihydrolipoyllysine-resid yes N/A 0.636 0.403 0.453 2e-51
Q869Y7439 Dihydrolipoyllysine-resid yes N/A 0.693 0.464 0.502 2e-51
O94681452 Probable dihydrolipoyllys yes N/A 0.697 0.453 0.496 2e-50
P45302409 Dihydrolipoyllysine-resid yes N/A 0.778 0.559 0.427 5e-50
>sp|Q01205|ODO2_RAT Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus GN=Dlst PE=1 SV=2 Back     alignment and function desciption
 Score =  245 bits (625), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/258 (55%), Positives = 161/258 (62%), Gaps = 39/258 (15%)

Query: 64  PPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVP 123
           PP        G RSE R KMNRMRQRIAQRLKEAQN  AMLTTFNE+DM   SN      
Sbjct: 209 PPLAEAGAAKGLRSEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEVDM---SNIQEMRA 265

Query: 124 APCNGIIEERFVEDG---ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPEC 180
              +  +++  ++ G   A VKA     + +P V         E   R   ++       
Sbjct: 266 RHKDAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDATKEVVYRDYIDI------- 318

Query: 181 KPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGG 216
             SVAVATP+GLVVPVIRN                        LAIED DGGTFTISNGG
Sbjct: 319 --SVAVATPRGLVVPVIRNVETMNYADIERTINELGEKARKNELAIEDMDGGTFTISNGG 376

Query: 217 VFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLF 276
           VFGSL GTPIINPPQSAILGMHG F+RPVA+ G+V V+PMMYVALTYDHRLIDGREAV F
Sbjct: 377 VFGSLFGTPIINPPQSAILGMHGIFDRPVAVGGKVEVRPMMYVALTYDHRLIDGREAVTF 436

Query: 277 LRKIKAAVEDPRIILAGL 294
           LRKIKAAVEDPR++L  L
Sbjct: 437 LRKIKAAVEDPRVLLLDL 454
The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of 3 enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 6EC: 1
>sp|P36957|ODO2_HUMAN Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DLST PE=1 SV=4 Back     alignment and function description
>sp|Q9D2G2|ODO2_MOUSE Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dlst PE=1 SV=1 Back     alignment and function description
>sp|Q9N0F1|ODO2_PIG Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Sus scrofa GN=DLST PE=1 SV=1 Back     alignment and function description
>sp|P11179|ODO2_BOVIN Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Bos taurus GN=DLST PE=1 SV=2 Back     alignment and function description
>sp|Q90512|ODO2_TAKRU Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial (Fragment) OS=Takifugu rubripes GN=dlst PE=3 SV=1 Back     alignment and function description
>sp|P19262|ODO2_YEAST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KGD2 PE=1 SV=2 Back     alignment and function description
>sp|Q869Y7|ODO2_DICDI Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum GN=odhB PE=1 SV=1 Back     alignment and function description
>sp|O94681|ODO2_SCHPO Probable dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=kgd2 PE=3 SV=1 Back     alignment and function description
>sp|P45302|ODO2_HAEIN Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=sucB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query294
189239144 420 PREDICTED: similar to dihydrolipoamide s 0.765 0.535 0.600 1e-75
270010782 423 hypothetical protein TcasGA2_TC010587 [T 0.765 0.531 0.600 1e-75
170035646 482 dihydrolipoamide succinyltransferase com 0.751 0.458 0.584 9e-75
157131795 491 dihydrolipoamide succinyltransferase com 0.744 0.446 0.591 2e-74
158287621 493 AGAP004055-PA [Anopheles gambiae str. PE 0.744 0.444 0.580 9e-74
328788384 514 PREDICTED: dihydrolipoyllysine-residue s 0.778 0.445 0.565 2e-73
380025911 505 PREDICTED: dihydrolipoyllysine-residue s 0.772 0.449 0.566 6e-73
328714865 484 PREDICTED: dihydrolipoyllysine-residue s 0.761 0.462 0.569 2e-72
389615075352 dihydrolipoamide succinyltransferase com 0.768 0.642 0.576 3e-72
289742901 482 dihydrolipoamide succinyltransferase [Gl 0.738 0.450 0.582 3e-72
>gi|189239144|ref|XP_971313.2| PREDICTED: similar to dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 161/268 (60%), Positives = 186/268 (69%), Gaps = 43/268 (16%)

Query: 55  AIEAATVKLPPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRK 114
           AIEAATVK+PP DPTKEISGTR+EQRVKMNRMR +IA+RLK+AQNVNAMLTTFNEIDM  
Sbjct: 168 AIEAATVKVPPQDPTKEISGTRTEQRVKMNRMRLKIAERLKQAQNVNAMLTTFNEIDM-- 225

Query: 115 ESNTSMPVPAPCNGIIEERF-VEDG---ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPG 170
             +  M          ++++ ++ G   A VKA     + +P V            +  G
Sbjct: 226 --SYIMEFRKANQDAFQKKYGLKLGFMSAFVKASAYALQDQPVV----------NAVIDG 273

Query: 171 RELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSD 206
           +E+         SVAVATPKGLVVPV+RN                        LA+ED D
Sbjct: 274 QEIIY-RDYVDISVAVATPKGLVVPVVRNVERMSYADIELAINALGEKARKGSLAVEDMD 332

Query: 207 GGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHR 266
           GGTFTISNGGVFGSLLGTPIINPPQSAILGMHG FERPVA+KGQVV++PMMY+ALTYDHR
Sbjct: 333 GGTFTISNGGVFGSLLGTPIINPPQSAILGMHGIFERPVAVKGQVVIRPMMYIALTYDHR 392

Query: 267 LIDGREAVLFLRKIKAAVEDPRIILAGL 294
           LIDGREAV FLRKIK AVEDPR++LAGL
Sbjct: 393 LIDGREAVFFLRKIKQAVEDPRVMLAGL 420

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|270010782|gb|EFA07230.1| hypothetical protein TcasGA2_TC010587 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|170035646|ref|XP_001845679.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase [Culex quinquefasciatus] gi|167877798|gb|EDS41181.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157131795|ref|XP_001655939.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase [Aedes aegypti] gi|157131797|ref|XP_001655940.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase [Aedes aegypti] gi|108881775|gb|EAT46000.1| AAEL002764-PA [Aedes aegypti] gi|403182503|gb|EJY57434.1| AAEL002764-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|158287621|ref|XP_309608.4| AGAP004055-PA [Anopheles gambiae str. PEST] gi|347971151|ref|XP_003436700.1| AGAP004055-PB [Anopheles gambiae str. PEST] gi|157019510|gb|EAA05341.5| AGAP004055-PA [Anopheles gambiae str. PEST] gi|333466611|gb|EGK96314.1| AGAP004055-PB [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|328788384|ref|XP_392679.4| PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380025911|ref|XP_003696707.1| PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial-like [Apis florea] Back     alignment and taxonomy information
>gi|328714865|ref|XP_001944020.2| PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|389615075|dbj|BAM20532.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase, partial [Papilio polytes] Back     alignment and taxonomy information
>gi|289742901|gb|ADD20198.1| dihydrolipoamide succinyltransferase [Glossina morsitans morsitans] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query294
UNIPROTKB|F1MEQ3456 DLST "Dihydrolipoyllysine-resi 0.323 0.208 0.831 2.3e-62
UNIPROTKB|B7Z5W8367 DLST "cDNA FLJ55034, highly si 0.795 0.637 0.552 3.3e-56
UNIPROTKB|P36957453 DLST "Dihydrolipoyllysine-resi 0.795 0.516 0.552 3.3e-56
RGD|1359615454 Dlst "dihydrolipoamide S-succi 0.802 0.519 0.534 6.8e-56
UNIPROTKB|G3V6P2454 Dlst "Dihydrolipoyllysine-resi 0.802 0.519 0.534 6.8e-56
UNIPROTKB|E2R0H0455 DLST "Uncharacterized protein" 0.782 0.505 0.549 1.4e-55
FB|FBgn0037891468 CG5214 [Drosophila melanogaste 0.799 0.502 0.514 2.3e-55
MGI|MGI:1926170454 Dlst "dihydrolipoamide S-succi 0.802 0.519 0.530 2.9e-55
UNIPROTKB|E1C7I0461 DLST "Uncharacterized protein" 0.765 0.488 0.547 4.8e-55
UNIPROTKB|Q9N0F1455 DLST "Dihydrolipoyllysine-resi 0.792 0.512 0.527 2.6e-54
UNIPROTKB|F1MEQ3 DLST "Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 404 (147.3 bits), Expect = 2.3e-62, Sum P(3) = 2.3e-62
 Identities = 79/95 (83%), Positives = 84/95 (88%)

Query:   200 LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYV 259
             LAIED DGGTFTISNGGVFGSL GTPIINPPQSAILGMH   +RPV I G+V V+PMMYV
Sbjct:   362 LAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHAIVDRPVVIGGKVEVRPMMYV 421

Query:   260 ALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL 294
             ALTYDHRLIDGREAV FLRKIKAAVEDPR++L  L
Sbjct:   422 ALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLLDL 456
GO:0005739 "mitochondrion" evidence=IEA
GO:0005634 "nucleus" evidence=IEA
GO:0045252 "oxoglutarate dehydrogenase complex" evidence=IEA
GO:0006099 "tricarboxylic acid cycle" evidence=IEA
GO:0004149 "dihydrolipoyllysine-residue succinyltransferase activity" evidence=IEA
UNIPROTKB|B7Z5W8 DLST "cDNA FLJ55034, highly similar to Dihydrolipoyllysine-residue succinyltransferase component of 2- oxoglutarate dehydrogenase complex, mitochondrial (EC 2.3.1.61)" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P36957 DLST "Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1359615 Dlst "dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G3V6P2 Dlst "Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2R0H0 DLST "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0037891 CG5214 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:1926170 Dlst "dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1C7I0 DLST "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q9N0F1 DLST "Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q01205ODO2_RAT2, ., 3, ., 1, ., 6, 10.55420.74480.4823yesN/A
P36957ODO2_HUMAN2, ., 3, ., 1, ., 6, 10.56480.75510.4900yesN/A
Q9N0F1ODO2_PIG2, ., 3, ., 1, ., 6, 10.54260.74480.4813yesN/A
Q9D2G2ODO2_MOUSE2, ., 3, ., 1, ., 6, 10.55030.74480.4823yesN/A
P11179ODO2_BOVIN2, ., 3, ., 1, ., 6, 10.53980.79250.5120yesN/A
Q869Y7ODO2_DICDI2, ., 3, ., 1, ., 6, 10.50200.69380.4646yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query294
PTZ00144418 PTZ00144, PTZ00144, dihydrolipoamide succinyltrans 2e-82
PRK05704407 PRK05704, PRK05704, dihydrolipoamide succinyltrans 2e-62
TIGR01347403 TIGR01347, sucB, 2-oxoglutarate dehydrogenase comp 3e-60
COG0508404 COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogena 2e-53
PLN02226463 PLN02226, PLN02226, 2-oxoglutarate dehydrogenase E 2e-49
pfam00198212 pfam00198, 2-oxoacid_dh, 2-oxoacid dehydrogenases 9e-48
PRK11856411 PRK11856, PRK11856, branched-chain alpha-keto acid 4e-44
PRK11855547 PRK11855, PRK11855, dihydrolipoamide acetyltransfe 5e-30
TIGR02927579 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogena 8e-25
PRK14843347 PRK14843, PRK14843, dihydrolipoamide acetyltransfe 5e-23
PRK11854633 PRK11854, aceF, pyruvate dehydrogenase dihydrolipo 1e-21
TIGR01349436 TIGR01349, PDHac_trf_mito, pyruvate dehydrogenase 8e-21
TIGR01348546 TIGR01348, PDHac_trf_long, pyruvate dehydrogenase 5e-19
PRK05704407 PRK05704, PRK05704, dihydrolipoamide succinyltrans 1e-18
PRK11857306 PRK11857, PRK11857, dihydrolipoamide acetyltransfe 8e-18
TIGR01347403 TIGR01347, sucB, 2-oxoglutarate dehydrogenase comp 2e-17
PLN02744539 PLN02744, PLN02744, dihydrolipoyllysine-residue ac 5e-17
PLN02528416 PLN02528, PLN02528, 2-oxoisovalerate dehydrogenase 7e-16
PRK12270 1228 PRK12270, kgd, alpha-ketoglutarate decarboxylase; 1e-05
cd0684974 cd06849, lipoyl_domain, Lipoyl domain of the dihyd 6e-05
COG0511140 COG0511, AccB, Biotin carboxyl carrier protein [Li 1e-04
pfam0036473 pfam00364, Biotin_lipoyl, Biotin-requiring enzyme 1e-04
cd0685067 cd06850, biotinyl_domain, The biotinyl-domain or b 2e-04
pfam1353350 pfam13533, Biotin_lipoyl_2, Biotin-lipoyl like 0.001
PRK05704 407 PRK05704, PRK05704, dihydrolipoamide succinyltrans 0.002
>gnl|CDD|240289 PTZ00144, PTZ00144, dihydrolipoamide succinyltransferase; Provisional Back     alignment and domain information 
 Score =  253 bits (649), Expect = 2e-82
 Identities = 127/315 (40%), Positives = 158/315 (50%), Gaps = 52/315 (16%)

Query: 12  PPADPTKEISGTRSEQRVKMNRNGRNLQKRSKYRQSQQPSQLNAIEAATVKLPPADPTKE 71
           PPA      +  ++E+                      P    A +          P   
Sbjct: 124 PPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPA--AAKPPEPAPAAKPPPTP 181

Query: 72  ISGT-RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEID------MRKESNTSMPVPA 124
           ++     E RV M+RMRQRIA+RLK +QN  AMLTTFNE D      +RKE         
Sbjct: 182 VARADPRETRVPMSRMRQRIAERLKASQNTCAMLTTFNECDMSALMELRKEYKDDFQKKH 241

Query: 125 PCN-GIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPS 183
               G     F+   A VKA     K  P V   N+ Y    ++     ++        S
Sbjct: 242 GVKLG-----FM--SAFVKASTIALKKMPIV---NA-YIDGDEIVYRNYVDI-------S 283

Query: 184 VAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGVFG 219
           VAVATP GLVVPVIRN                        L +ED  GGTFTISNGGVFG
Sbjct: 284 VAVATPTGLVVPVIRNCENKSFAEIEKELADLAEKARNNKLTLEDMTGGTFTISNGGVFG 343

Query: 220 SLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRK 279
           SL+GTPIINPPQSAILGMH   +RPV +  ++V++P+MY+ALTYDHRLIDGR+AV FL+K
Sbjct: 344 SLMGTPIINPPQSAILGMHAIKKRPVVVGNEIVIRPIMYLALTYDHRLIDGRDAVTFLKK 403

Query: 280 IKAAVEDPRIILAGL 294
           IK  +EDP  +L  L
Sbjct: 404 IKDLIEDPARMLLDL 418

Length = 418
>gnl|CDD|235571 PRK05704, PRK05704, dihydrolipoamide succinyltransferase; Validated Back     alignment and domain information
>gnl|CDD|233365 TIGR01347, sucB, 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) Back     alignment and domain information
>gnl|CDD|223582 COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|177871 PLN02226, PLN02226, 2-oxoglutarate dehydrogenase E2 component Back     alignment and domain information
>gnl|CDD|215782 pfam00198, 2-oxoacid_dh, 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Back     alignment and domain information
>gnl|CDD|237001 PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed Back     alignment and domain information
>gnl|CDD|237000 PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|200219 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase Back     alignment and domain information
>gnl|CDD|184847 PRK14843, PRK14843, dihydrolipoamide acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236999 PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated Back     alignment and domain information
>gnl|CDD|233367 TIGR01349, PDHac_trf_mito, pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form Back     alignment and domain information
>gnl|CDD|233366 TIGR01348, PDHac_trf_long, pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form Back     alignment and domain information
>gnl|CDD|235571 PRK05704, PRK05704, dihydrolipoamide succinyltransferase; Validated Back     alignment and domain information
>gnl|CDD|237002 PRK11857, PRK11857, dihydrolipoamide acetyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|233365 TIGR01347, sucB, 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) Back     alignment and domain information
>gnl|CDD|215397 PLN02744, PLN02744, dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex Back     alignment and domain information
>gnl|CDD|215289 PLN02528, PLN02528, 2-oxoisovalerate dehydrogenase E2 component Back     alignment and domain information
>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>gnl|CDD|133458 cd06849, lipoyl_domain, Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases Back     alignment and domain information
>gnl|CDD|223585 COG0511, AccB, Biotin carboxyl carrier protein [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|201182 pfam00364, Biotin_lipoyl, Biotin-requiring enzyme Back     alignment and domain information
>gnl|CDD|133459 cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase Back     alignment and domain information
>gnl|CDD|205711 pfam13533, Biotin_lipoyl_2, Biotin-lipoyl like Back     alignment and domain information
>gnl|CDD|235571 PRK05704, PRK05704, dihydrolipoamide succinyltransferase; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 294
PRK14843347 dihydrolipoamide acetyltransferase; Provisional 100.0
PRK11857306 dihydrolipoamide acetyltransferase; Reviewed 100.0
PRK05704407 dihydrolipoamide succinyltransferase; Validated 100.0
TIGR01347403 sucB 2-oxoglutarate dehydrogenase complex dihydrol 100.0
PF00198231 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransfe 100.0
TIGR02927590 SucB_Actino 2-oxoglutarate dehydrogenase, E2 compo 100.0
TIGR01349435 PDHac_trf_mito pyruvate dehydrogenase complex dihy 100.0
PLN02528416 2-oxoisovalerate dehydrogenase E2 component 100.0
TIGR01348546 PDHac_trf_long pyruvate dehydrogenase complex dihy 100.0
PLN02744539 dihydrolipoyllysine-residue acetyltransferase comp 100.0
PLN02226463 2-oxoglutarate dehydrogenase E2 component 100.0
PTZ00144418 dihydrolipoamide succinyltransferase; Provisional 100.0
PRK11854633 aceF pyruvate dehydrogenase dihydrolipoyltransacet 100.0
KOG0559|consensus457 100.0
PRK11855547 dihydrolipoamide acetyltransferase; Reviewed 100.0
PRK11856411 branched-chain alpha-keto acid dehydrogenase subun 100.0
COG0508404 AceF Pyruvate/2-oxoglutarate dehydrogenase complex 100.0
KOG0557|consensus470 100.0
KOG0558|consensus474 100.0
PRK12270 1228 kgd alpha-ketoglutarate decarboxylase; Reviewed 100.0
PRK13757219 chloramphenicol acetyltransferase; Provisional 99.82
PF00302206 CAT: Chloramphenicol acetyltransferase; InterPro: 99.81
COG4845219 Chloramphenicol O-acetyltransferase [Defense mecha 99.48
KOG0559|consensus457 91.92
>PRK14843 dihydrolipoamide acetyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.5e-61  Score=458.94  Aligned_cols=260  Identities=28%  Similarity=0.384  Sum_probs=207.4

Q ss_pred             CCCCcCCccchhhccccCCcchhhh--------------hhhhhhcCCcccchhhhcccCCCCCCCCCcCCCCCcceEee
Q psy7777          17 TKEISGTRSEQRVKMNRNGRNLQKR--------------SKYRQSQQPSQLNAIEAATVKLPPADPTKEISGTRSEQRVK   82 (294)
Q Consensus        17 ~~~~~~t~~~~~~~~~~~g~~l~~v--------------~k~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp   82 (294)
                      .-++.+||..+|. +.+.||||..+              ..|....+.....+ ++++...+...+. .....+.++++|
T Consensus        46 ~~~~~asP~aR~l-A~e~gidl~~v~gtG~~GrI~k~DV~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~v~  122 (347)
T PRK14843         46 TNVVRISPLAKRI-ALEHNIAWQEIQGTGHRGKIMKKDVLALLPENIENDSIK-SPAQIEKVEEVPD-NVTPYGEIERIP  122 (347)
T ss_pred             cccccCCchhhHH-HHHcCCCHhhCCCCCCCCcccHHHHHHHHhccccCcccc-CCCCCccccCCCc-ccccCCcceeee
Confidence            4455699999999 99999999773              23321111000000 0000000000000 001112356789


Q ss_pred             CcHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhh----hccccCceehhHHHhhhcCCccccCC
Q psy7777          83 MNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEE----RFVEDGATVKAGQQLFKIKPTVCTPN  158 (294)
Q Consensus        83 ~s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~----~~~~~~~~ikAva~Al~~~P~l~~~N  158 (294)
                      +++|||.||++|++||+++||||++.|||+|+|.++    |.+++....+    +++..+|++||++.||++||.|   |
T Consensus       123 l~~~r~~ia~~m~~S~~~ip~~~~~~evd~t~l~~~----r~~~~~~~~~~~~~kls~~~~likA~a~AL~~~P~~---N  195 (347)
T PRK14843        123 MTPMRKVIAQRMVESYLTAPTFTLNYEVDMTEMLAL----RKKVLEPIMEATGKKTTVTDLLSLAVVKTLMKHPYI---N  195 (347)
T ss_pred             CcHHHHHHHHHHHHHHhhCCeEEEEEEEEchHHHHH----HHHHHHHHHhhcCCcccHHHHHHHHHHHHHHhCcce---e
Confidence            999999999999999999999999999999997653    3333321111    2333468999999999999999   9


Q ss_pred             ceeecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCCCCCCCCeeEEee
Q psy7777         159 SKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTISN  214 (294)
Q Consensus       159 ~~~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~~d~~ggTftISN  214 (294)
                      ++|+     ++++.+++ ++++||||||++++||+||||+|                        |+++||+||||||||
T Consensus       196 a~~~-----~~~~~i~~-~~~vnigvAV~~~~GL~vPVIr~a~~~sl~eIa~~i~~l~~~Ar~~kL~~~d~~GgTfTISN  269 (347)
T PRK14843        196 ASLT-----EDGKTIIT-HNYVNLAMAVGMDNGLMTPVVYNAEKMSLSELVVAFKDVIGRTLDGKLAPSELQNSTFTISN  269 (347)
T ss_pred             EEEe-----cCCCeEEE-ecccceEEEEecCCCeEeCcCCCcccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCCeEEEeC
Confidence            9998     33567999 99999999999999999999998                        999999999999999


Q ss_pred             cCCCCCCCceeccCCCCceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhCHHHhhc
Q psy7777         215 GGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILA  292 (294)
Q Consensus       215 lG~~G~~~ftpii~~Pq~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~lll  292 (294)
                      +|+||+++|+|||||||+||||+|+++++|++.||++++|++|+||||||||+|||+++|+||++|+++||+|..||+
T Consensus       270 lG~~G~~~~tpIInpPq~aIlgvG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~lE~p~~ll~  347 (347)
T PRK14843        270 LGMFGVQSFGPIINQPNSAILGVSSTIEKPVVVNGEIVIRPIMSLGLTIDHRVVDGMAGAKFMKDLKELIETPISMLI  347 (347)
T ss_pred             CCCCcccceeccccCCceEEEecCCcceeeEEECCeEEEEeEEEEEEecchhhhCcHHHHHHHHHHHHHhcCHHHhhC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999998874

>PRK11857 dihydrolipoamide acetyltransferase; Reviewed Back     alignment and domain information
>PRK05704 dihydrolipoamide succinyltransferase; Validated Back     alignment and domain information
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) Back     alignment and domain information
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2 Back     alignment and domain information
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase Back     alignment and domain information
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form Back     alignment and domain information
>PLN02528 2-oxoisovalerate dehydrogenase E2 component Back     alignment and domain information
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form Back     alignment and domain information
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex Back     alignment and domain information
>PLN02226 2-oxoglutarate dehydrogenase E2 component Back     alignment and domain information
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional Back     alignment and domain information
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated Back     alignment and domain information
>KOG0559|consensus Back     alignment and domain information
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed Back     alignment and domain information
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed Back     alignment and domain information
>COG0508 AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>KOG0557|consensus Back     alignment and domain information
>KOG0558|consensus Back     alignment and domain information
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>PRK13757 chloramphenicol acetyltransferase; Provisional Back     alignment and domain information
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2 Back     alignment and domain information
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms] Back     alignment and domain information
>KOG0559|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query294
1c4t_A233 Catalytic Domain From Trimeric Dihydrolipoamide Suc 2e-45
3mae_A256 Crystal Structure Of Probable Dihydrolipamide Acety 8e-16
3rqc_A224 Crystal Structure Of The Catalytic Core Of The 2-Ox 2e-15
3l60_A250 Crystal Structure Of Branched-Chain Alpha-Keto Acid 7e-15
1b5s_A242 Dihydrolipoyl Transacetylase (E.C.2.3.1.12) Catalyt 2e-14
3duf_I428 Snapshots Of Catalysis In The E1 Subunit Of The Pyr 3e-14
1dpc_A243 Crystallographic And Enzymatic Investigations On Th 3e-12
3b8k_A239 Structure Of The Truncated Human Dihydrolipoyl Acet 4e-12
1eaa_A243 Atomic Structure Of The Cubic Core Of The Pyruvate 1e-11
1dpd_A243 Crystallographic And Enzymatic Investigations On Th 3e-11
1dpb_A243 Crystallographic And Enzymatic Investigations On Th 2e-10
2ihw_A262 Crystal Structure Of A Cubic Core Of The Dihydrolip 1e-09
2xt6_A 1113 Crystal Structure Of Mycobacterium Smegmatis Alpha- 6e-06
>pdb|1C4T|A Chain A, Catalytic Domain From Trimeric Dihydrolipoamide Succinyltransferase Length = 233 Back     alignment and structure 
Iteration: 1

 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/249 (43%), Positives = 144/249 (57%), Gaps = 52/249 (20%)
Query: 76  RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFV 135
           RSE+RV M R+R+R+A+RL EA+N  AMLTTFNE++M+      M +        E+R  
Sbjct: 2   RSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKP----IMDLRKQYGEAFEKRH- 56
Query: 136 EDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPP--------ECKPSVAVA 187
                ++ G   F +K  V          + L+   E+N+               S+AV+
Sbjct: 57  ----GIRLGFMSFYVKAVV----------EALKRYPEVNASIDGDDVVYHNYFDVSMAVS 102
Query: 188 TPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLG 223
           TP+GLV PV+R+                        L +ED  GG FTI+NGGVFGSL+ 
Sbjct: 103 TPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS 162
Query: 224 TPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAA 283
           TPIINPPQSAILGMH   +RP+A+ GQV + PMMY+AL+YDHRLIDGRE+V FL  IK  
Sbjct: 163 TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKEL 222
Query: 284 VEDP-RIIL 291
           +EDP R++L
Sbjct: 223 LEDPTRLLL 231
>pdb|3MAE|A Chain A, Crystal Structure Of Probable Dihydrolipamide Acetyltransferase From Listeria Monocytogenes 4b F2365 Length = 256 Back     alignment and structure
>pdb|3RQC|A Chain A, Crystal Structure Of The Catalytic Core Of The 2-Oxoacid Dehydrogenase Multienzyme Complex From Thermoplasma Acidophilum Length = 224 Back     alignment and structure
>pdb|3L60|A Chain A, Crystal Structure Of Branched-Chain Alpha-Keto Acid Dehydrogenase Subunit E2 From Mycobacterium Tuberculosis Length = 250 Back     alignment and structure
>pdb|1B5S|A Chain A, Dihydrolipoyl Transacetylase (E.C.2.3.1.12) Catalytic Domain (Residues 184-425) From Bacillus Stearothermophilus Length = 242 Back     alignment and structure
>pdb|3DUF|I Chain I, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex Length = 428 Back     alignment and structure
>pdb|1DPC|A Chain A, Crystallographic And Enzymatic Investigations On The Role Of Ser558, His610 And Asn614 In The Catalytic Mechanism Of Azotobacter Vinelandii Dihydrolipoamide Acetyltransferase (E2p) Length = 243 Back     alignment and structure
>pdb|3B8K|A Chain A, Structure Of The Truncated Human Dihydrolipoyl Acetyltransferase (E2) Length = 239 Back     alignment and structure
>pdb|1EAA|A Chain A, Atomic Structure Of The Cubic Core Of The Pyruvate Dehydrogenase Multienzyme Complex Length = 243 Back     alignment and structure
>pdb|1DPD|A Chain A, Crystallographic And Enzymatic Investigations On The Role Of Ser558, His610 And Asn614 In The Catalytic Mechanism Of Azotobacter Vinelandii Dihydrolipoamide Acetyltransferase (E2p) Length = 243 Back     alignment and structure
>pdb|1DPB|A Chain A, Crystallographic And Enzymatic Investigations On The Role Of Ser558, His610 And Asn614 In The Catalytic Mechanism Of Azotobacter Vinelandii Dihydrolipoamide Acetyltransferase (E2p) Length = 243 Back     alignment and structure
>pdb|2IHW|A Chain A, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide Acyltransferase (E2b) Component In The Branched-Chain Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Apo Form Length = 262 Back     alignment and structure
>pdb|2XT6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase Homodimer (Orthorhombic Form) Length = 1113 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query294
1scz_A233 E2, dihydrolipoamide succinyltransferase; COA-depe 1e-93
3mae_A256 2-oxoisovalerate dehydrogenase E2 component, dihyd 2e-83
3l60_A250 Branched-chain alpha-keto acid dehydrogenase; stru 1e-69
3dva_I428 Dihydrolipoyllysine-residue acetyltransferase comp 4e-69
3dva_I 428 Dihydrolipoyllysine-residue acetyltransferase comp 8e-04
3rqc_A224 Probable lipoamide acyltransferase; alpha beta fol 4e-69
1dpb_A243 Dihydrolipoyl-transacetylase; dihydrolipoamide ace 4e-58
2ii3_A262 Lipoamide acyltransferase component of branched-C 2e-53
3b8k_A239 PDCE2;, dihydrolipoyllysine-residue acetyltransfer 5e-51
1q23_A219 Chloramphenicol acetyltransferase; CAT I, trimer, 3e-14
3cla_A213 Type III chloramphenicol acetyltransferase; transf 1e-10
2i9d_A217 Chloramphenicol acetyltransferase; structural geno 4e-08
2xt6_A 1113 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET 2e-06
2k32_A116 A; NMR {Campylobacter jejuni} PDB: 2k33_A* Length 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
2f1m_A277 Acriflavine resistance protein A; helical hairpin, 1e-04
1vf7_A 369 Multidrug resistance protein MEXA; alpha hairpin, 2e-04
3ne5_B413 Cation efflux system protein CUSB; transmembrane h 3e-04
1pmr_A80 Dihydrolipoyl succinyltransferase; 2-oxoglutarate 8e-04
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A Length = 233 Back     alignment and structure
 Score =  275 bits (706), Expect = 1e-93
 Identities = 108/257 (42%), Positives = 140/257 (54%), Gaps = 63/257 (24%)

Query: 76  RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDM------RKESNTSMPVPAPCNGI 129
           RSE+RV M R+R+R+A+RL EA+N  AMLTTFNE++M      RK+              
Sbjct: 2   RSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYG------------ 49

Query: 130 IEERFVED--------GATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECK 181
             E F +            VKA  +  K  P V   N+    +  +              
Sbjct: 50  --EAFEKRHGIRLGFMSFYVKAVVEALKRYPEV---NASIDGDDVVYHNY--------FD 96

Query: 182 PSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGV 217
            S+AV+TP+GLV PV+R+                        L +ED  GG FTI+NGGV
Sbjct: 97  VSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGV 156

Query: 218 FGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFL 277
           FGSL+ TPIINPPQSAILGMH   +RP+A+ GQV + PMMY+AL+YDHRLIDGRE+V FL
Sbjct: 157 FGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFL 216

Query: 278 RKIKAAVEDPRIILAGL 294
             IK  +EDP  +L  +
Sbjct: 217 VTIKELLEDPTRLLLDV 233
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes} Length = 256 Back     alignment and structure
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} Length = 250 Back     alignment and structure
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A Length = 428 Back     alignment and structure
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A Length = 428 Back     alignment and structure
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728} Length = 224 Back     alignment and structure
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A Length = 243 Back     alignment and structure
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A* Length = 262 Back     alignment and structure
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens} Length = 239 Back     alignment and structure
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A* Length = 219 Back     alignment and structure
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A* Length = 213 Back     alignment and structure
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron} Length = 217 Back     alignment and structure
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Length = 1113 Back     alignment and structure
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A* Length = 116 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli} Length = 277 Back     alignment and structure
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A Length = 369 Back     alignment and structure
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 3h9i_A 3h94_A 3h9t_B Length = 413 Back     alignment and structure
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1 Length = 80 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query294
3mae_A256 2-oxoisovalerate dehydrogenase E2 component, dihyd 100.0
1scz_A233 E2, dihydrolipoamide succinyltransferase; COA-depe 100.0
1dpb_A243 Dihydrolipoyl-transacetylase; dihydrolipoamide ace 100.0
3l60_A250 Branched-chain alpha-keto acid dehydrogenase; stru 100.0
2ii3_A262 Lipoamide acyltransferase component of branched-C 100.0
3dva_I428 Dihydrolipoyllysine-residue acetyltransferase comp 100.0
3b8k_A239 PDCE2;, dihydrolipoyllysine-residue acetyltransfer 100.0
3rqc_A224 Probable lipoamide acyltransferase; alpha beta fol 100.0
2xt6_A 1113 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET 100.0
1q23_A219 Chloramphenicol acetyltransferase; CAT I, trimer, 100.0
3cla_A213 Type III chloramphenicol acetyltransferase; transf 100.0
2i9d_A217 Chloramphenicol acetyltransferase; structural geno 100.0
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes} Back     alignment and structure
Probab=100.00  E-value=3.6e-60  Score=435.49  Aligned_cols=209  Identities=30%  Similarity=0.424  Sum_probs=184.5

Q ss_pred             cCCCCCcceEeeCcHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhh----hccccCceehhHHH
Q psy7777          71 EISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEE----RFVEDGATVKAGQQ  146 (294)
Q Consensus        71 ~~~~~~~~~~vp~s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~----~~~~~~~~ikAva~  146 (294)
                      ..+..+.++++|+++|||+||++|.+||+++||||++.+||+|+|.++    |+++|...++    +++..++++||+++
T Consensus        11 ~~~~~~~~~~~pl~~~rk~ia~~m~~S~~~iP~~t~~~evDvt~l~~~----r~~~k~~~~~~~g~kls~~~~iikAva~   86 (256)
T 3mae_A           11 PVRSAAGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRY----RNAVKDSFKKEEGYSLTYFAFFIKAVAQ   86 (256)
T ss_dssp             ----CCSCEEEECCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHH----HHHHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred             CCcCCCCceEEeCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHH----HHHHHhhhhhhcCCCccHHHHHHHHHHH
Confidence            344556788999999999999999999999999999999999997653    2222211110    11222579999999


Q ss_pred             hhhcCCccccCCceeecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCC
Q psy7777         147 LFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAI  202 (294)
Q Consensus       147 Al~~~P~l~~~N~~~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~  202 (294)
                      ||++||+|   |++|+       +++|++ ++++|||+||++++||++|||+|                        |.+
T Consensus        87 AL~~~P~~---Na~~~-------~~~i~~-~~~vnigiAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~  155 (256)
T 3mae_A           87 ALKEFPQL---NSTWA-------GDKIIE-HANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQ  155 (256)
T ss_dssp             HHHHCTTT---SEEEE-------TTEEEE-CSSCCEEECCCCTTSCCCCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCH
T ss_pred             HHHhCHHh---hhEEe-------cCEEEE-cCcEEEEeEEEcCCceEEEEEcCCCCCCHHHHHHHHHHHHHHHhcCCCCc
Confidence            99999999   99999       789999 99999999999999999999988                        899


Q ss_pred             CCCCCCeeEEeecCCCCCCCceeccCCCCceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHH
Q psy7777         203 EDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKA  282 (294)
Q Consensus       203 ~d~~ggTftISNlG~~G~~~ftpii~~Pq~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~  282 (294)
                      +|++||||||||+||||+++|+|||||||+||||+|+++++||+.+|+++++++|+||||||||||||+++|+||++|++
T Consensus       156 ~e~~ggTftISNlG~~G~~~ftpIInppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~  235 (256)
T 3mae_A          156 ADMEGGTFTVNSTGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKA  235 (256)
T ss_dssp             HHHSCCSEEEECGGGGTCSEEECCCCTTSSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEecCCCCCccceEcccCCCCceEEEecccEEEEEEECCEEEEeEEEEEEEEEccccccHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhCHHHhhcCC
Q psy7777         283 AVEDPRIILAGL  294 (294)
Q Consensus       283 ~Le~P~~lll~~  294 (294)
                      +||+|+.|...|
T Consensus       236 ~Le~P~~~~~~~  247 (256)
T 3mae_A          236 NVEKISKENTAL  247 (256)
T ss_dssp             HHHTCCTTTCCC
T ss_pred             HHhChHHHHHHH
Confidence            999999876543
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A Back     alignment and structure
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A Back     alignment and structure
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0 Back     alignment and structure
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A* Back     alignment and structure
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A Back     alignment and structure
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens} Back     alignment and structure
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728} Back     alignment and structure
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Back     alignment and structure
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A* Back     alignment and structure
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A* Back     alignment and structure
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 294
d1scza_233 c.43.1.1 (A:) Dihydrolipoamide succinyltransferase 5e-48
d1b5sa_242 c.43.1.1 (A:) Dihydrolipoamide acetyltransferase { 3e-41
d1dpba_243 c.43.1.1 (A:) Dihydrolipoamide acetyltransferase { 5e-40
d3claa_213 c.43.1.1 (A:) Chloramphenicol acetyltransferase, C 1e-27
d1q23a_214 c.43.1.1 (A:) Chloramphenicol acetyltransferase, C 1e-26
d1laba_80 b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide ac 4e-05
d1bdoa_80 b.84.1.1 (A:) Biotinyl domain of acetyl-CoA carbox 2e-04
d1k8ma_87 b.84.1.1 (A:) Lipoyl domain of the mitochondrial b 6e-04
d1dcza_77 b.84.1.1 (A:) Biotin carboxyl carrier domain of tr 6e-04
d1vf7a_237 f.46.1.1 (A:) Multidrug resistance protein MexA do 6e-04
d1pmra_80 b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate 0.002
>d1scza_ c.43.1.1 (A:) Dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]} Length = 233 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: CAT-like
domain: Dihydrolipoamide succinyltransferase
species: Escherichia coli [TaxId: 562]

 Score =  158 bits (400), Expect = 5e-48
 Identities = 104/243 (42%), Positives = 136/243 (55%), Gaps = 35/243 (14%)

Query: 76  RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFV 135
           RSE+RV M R+R+R+A+RL EA+N  AMLTTFNE++M+   +               R  
Sbjct: 2   RSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLG 61

Query: 136 EDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVP 195
                VKA  +  K  P V    +    +  +               S+AV+TP+GLV P
Sbjct: 62  FMSFYVKAVVEALKRYPEVN---ASIDGDDVVYH--------NYFDVSMAVSTPRGLVTP 110

Query: 196 VIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQ 231
           V+R+                        L +ED  GG FTI+NGGVFGSL+ TPIINPPQ
Sbjct: 111 VLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQ 170

Query: 232 SAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIIL 291
           SAILGMH   +RP+A+ GQV + PMMY+AL+YDHRLIDGRE+V FL  IK  +EDP  +L
Sbjct: 171 SAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLL 230

Query: 292 AGL 294
             +
Sbjct: 231 LDV 233
>d1b5sa_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 Back     information, alignment and structure
>d1dpba_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]} Length = 243 Back     information, alignment and structure
>d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Length = 213 Back     information, alignment and structure
>d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Length = 214 Back     information, alignment and structure
>d1laba_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Length = 80 Back     information, alignment and structure
>d1bdoa_ b.84.1.1 (A:) Biotinyl domain of acetyl-CoA carboxylase {Escherichia coli [TaxId: 562]} Length = 80 Back     information, alignment and structure
>d1k8ma_ b.84.1.1 (A:) Lipoyl domain of the mitochondrial branched-chain alpha-ketoacid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 87 Back     information, alignment and structure
>d1dcza_ b.84.1.1 (A:) Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} Length = 77 Back     information, alignment and structure
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]} Length = 237 Back     information, alignment and structure
>d1pmra_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Escherichia coli [TaxId: 562]} Length = 80 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query294
d1scza_233 Dihydrolipoamide succinyltransferase {Escherichia 100.0
d1dpba_243 Dihydrolipoamide acetyltransferase {Azotobacter vi 100.0
d1b5sa_242 Dihydrolipoamide acetyltransferase {Bacillus stear 100.0
d1q23a_214 Chloramphenicol acetyltransferase, CAT {Escherichi 100.0
d3claa_213 Chloramphenicol acetyltransferase, CAT {Escherichi 100.0
>d1scza_ c.43.1.1 (A:) Dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: CAT-like
domain: Dihydrolipoamide succinyltransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.7e-62  Score=440.29  Aligned_cols=204  Identities=52%  Similarity=0.798  Sum_probs=185.9

Q ss_pred             CcceEeeCcHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhh----hccccCceehhHHHhhhcC
Q psy7777          76 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEE----RFVEDGATVKAGQQLFKIK  151 (294)
Q Consensus        76 ~~~~~vp~s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~----~~~~~~~~ikAva~Al~~~  151 (294)
                      ++++++|+++|||+||++|++||+++||||++.+||+|+|.++    |.+++...++    ++...+|++||++.||++|
T Consensus         2 ~~ee~vpls~~rk~ia~~m~~S~~~iP~~~~~~evd~t~l~~~----r~~~~~~~~~~~~~klt~~~~likA~a~aL~~~   77 (233)
T d1scza_           2 RSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDL----RKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRY   77 (233)
T ss_dssp             CSCCCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHH----HHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHC
T ss_pred             CCCcccCCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHH----HHHHHHhhHhhcCCccCHHHHHHHHHHHHHHhC
Confidence            4567899999999999999999999999999999999997553    2222211111    1222367999999999999


Q ss_pred             CccccCCceeecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCCCCCCC
Q psy7777         152 PTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDG  207 (294)
Q Consensus       152 P~l~~~N~~~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~~d~~g  207 (294)
                      |.+   |++|+       ++++++ ++++|||+||++++||++|||+|                        |+++|++|
T Consensus        78 P~~---Na~~~-------~~~i~~-~~~vnIgiAv~~~~GL~vPvI~~a~~~sl~eia~~~~~l~~~ar~~~L~~~d~~g  146 (233)
T d1scza_          78 PEV---NASID-------GDDVVY-HNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTG  146 (233)
T ss_dssp             TTT---TCEEE-------TTEEEC-CSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCCHHHHSC
T ss_pred             chh---heEEc-------CCeEEE-eccceEEEEEEcCCCeEEeEeeccccCCHHHHHHHHHHHHHHhhcCCCCHHHhCC
Confidence            999   99999       889999 99999999999999999999998                        99999999


Q ss_pred             CeeEEeecCCCCCCCceeccCCCCceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhCH
Q psy7777         208 GTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDP  287 (294)
Q Consensus       208 gTftISNlG~~G~~~ftpii~~Pq~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P  287 (294)
                      |||||||+|++|+++|+|||||||+||||+|+++++|++.+|+++++++|+||||||||++||++||+||++|+++||+|
T Consensus       147 gTfTISNlG~~g~~~~tpii~ppq~aIl~vG~i~~~pv~~~g~i~~r~~~~lsls~DHRviDGa~aa~Fl~~l~~~lE~P  226 (233)
T d1scza_         147 GNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDP  226 (233)
T ss_dssp             CSEEEEEGGGGTCCCCCCCCCTTCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHCT
T ss_pred             CcEEEEcCccccceeeeeecCCCCceEEecccceeeccccCCeEEEEEEeEEEEEhhcchhccHHHHHHHHHHHHHHhCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCC
Q psy7777         288 RIILAGL  294 (294)
Q Consensus       288 ~~lll~~  294 (294)
                      +.||++|
T Consensus       227 ~~lll~~  233 (233)
T d1scza_         227 TRLLLDV  233 (233)
T ss_dssp             THHHHTC
T ss_pred             HHHhhCC
Confidence            9999987
>d1dpba_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1b5sa_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure