Psyllid ID: psy7886

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
Protein Sequence
MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQTPQQSYIKINMKKRNFLKGSLQDASYNIMLQKLSVPI
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHcccccEEEEEEccccccccccccccEEEEEEccccccccccccccHHHHHHHHHHHHccHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHcccccEEEEEEccccccccccccccEEEEEEccEEccccccccHcHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mlgtqgggmDQAIAFLaspgcakhiqfhplrsedvvlpsQAVFVVAQSLAtknkaqsseFNTRVVECRlsakwiphlqtpqQSYIKINMKKRNFLKGSLQDASYNIMLQKLSVPI
Flexible Loop (DISEMBL)
MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLAtknkaqssefnTRVVECRLsakwiphlqtpqQSYIKINMKKRNFLKgslqdasynimlqklsvpi
Low Complexity Region (SEG)
MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQTPQQSYIKINMKKRNFLKGSLQDASYNIMLQKLSVPI
Disordered region (IsUnstruct)
***********AIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATK******EFNTRVVECRLSAKWIPHLQTPQQSYIKINMKKRNFLKGSLQDASYNIML*******
Disordered Region (DISOPRED)
MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQTPQQSYI************SLQDASYNIMLQKLSVP*
Disordered Region (DISEMBL)
********MDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLAT*********NTRVVECRLSAKWIPHLQTPQQSYIKINMKKRNFLKGSLQDASYNIMLQKLSVPI
Disordered Region (DISPRO)
MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQTPQQSYIKINMKKRNFLKGSLQDASYNIMLQKLSVP*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQTPQQSYIKINMKKRNFLKGSLQDASYNIMLQKLSVPI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	115	2.2.26 [Sep-21-2011]
Q01415	458	N-acetylgalactosamine kin	yes	N/A	0.695	0.174	0.575	3e-20
Q5R6J8	458	N-acetylgalactosamine kin	yes	N/A	0.695	0.174	0.575	3e-20
Q5XIG6	458	N-acetylgalactosamine kin	yes	N/A	0.617	0.155	0.633	5e-20
Q68FH4	458	N-acetylgalactosamine kin	yes	N/A	0.617	0.155	0.619	3e-19
Q9SEE5	496	Galactokinase OS=Arabidop	yes	N/A	0.608	0.141	0.513	6e-14
Q54DN6	501	Galactokinase OS=Dictyost	yes	N/A	0.608	0.139	0.479	5e-11
P09608	503	Galactokinase OS=Kluyvero	yes	N/A	0.608	0.139	0.333	0.0009

>sp|Q01415|GALK2_HUMAN N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 59/80 (73%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
           +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN
Sbjct: 182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 241

Query: 62  TRVVECRLSAKWIPHLQTPQ 81
            RV+ECRL+AK +   ++ Q
Sbjct: 242 IRVMECRLAAKLLAKYKSLQ 261

Acts on GalNAc. Also acts as a galactokinase when galactose is present at high concentrations. May be involved in a salvage pathway for the reutilization of free GalNAc derived from the degradation of complex carbohydrates.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 5EC: 7

>sp|Q5R6J8|GALK2_PONAB N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 59/80 (73%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
           +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN
Sbjct: 182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 241

Query: 62  TRVVECRLSAKWIPHLQTPQ 81
            RV+ECRL+AK +   ++ Q
Sbjct: 242 IRVMECRLAAKLLAKYKSLQ 261

Acts on GalNAc. Also acts as a galactokinase when galactose is present at high concentrations.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 5

EC: 7

>sp|Q5XIG6|GALK2_RAT N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 55/71 (77%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
           +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN
Sbjct: 182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 241

Query: 62  TRVVECRLSAK 72
            RV+ECRL+AK
Sbjct: 242 VRVMECRLAAK 252

Acts on GalNAc. Also acts as a galactokinase when galactose is present at high concentrations.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 5

EC: 7

>sp|Q68FH4|GALK2_MOUSE N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=1 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 55/71 (77%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
           +GT+GGGMDQ+I+FLA  G AK I+F PLR+ +V LPS AVFV+A S    NKA +S FN
Sbjct: 182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATNVKLPSGAVFVIANSCMEMNKAATSHFN 241

Query: 62  TRVVECRLSAK 72
            RV+ECRL+AK
Sbjct: 242 VRVMECRLAAK 252

Acts on GalNAc. Also acts as a galactokinase when galactose is present at high concentrations.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 5

EC: 7

>sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=1 SV=2

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 2/72 (2%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSS--E 59
           +GTQ GGMDQAI+ +A  G A+ I F+P+R+ DV LP    FV+A SLA   KA ++   
Sbjct: 202 IGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVKLPDGGSFVIAHSLAESQKAVTAAKN 261

Query: 60  FNTRVVECRLSA 71
           +N RVVECRL++
Sbjct: 262 YNNRVVECRLAS 273

Sugar-1-kinase with a very high substrate specificity for the alpha-anomeric configuration of D-galacose (D-Gal). Converts also efficiently 2-deoxy-D-Gal to 2-deoxy-D-al-1-phosphate.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 6

>sp|Q54DN6|GALK_DICDI Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQAVFVVAQSLATKNK--AQSS 58
           +G + GGMDQ+I+FLA    AK I+FHP L++ DV LP    FV+  SL    K    ++
Sbjct: 199 VGVESGGMDQSISFLAEQNTAKLIEFHPSLKTFDVQLPKGVSFVICNSLVDSLKVVTGAT 258

Query: 59  EFNTRVVECRLSA 71
            +N RVVECRL+A
Sbjct: 259 NYNLRVVECRLAA 271

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 6

>sp|P09608|GAL1_KLULA Galactokinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL1 PE=2 SV=2

 Score = 42.4 bits (98), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQ--AVFVVAQSLATKNKAQSS 58
           +G   GGMDQA +     G A +++F P L++     P      F++A +L   NKA++ 
Sbjct: 197 VGVNNGGMDQAASICGIEGHALYVEFKPELKATPFKFPEDLPISFLIANTLVVSNKAETG 256

Query: 59  --EFNTRVVECRLSA 71
              +N RVVE  ++A
Sbjct: 257 PVNYNLRVVEVTVAA 271

Seems bifunctional with both a galactokinase activity and the ability to induce the GAL genes.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
91079260	459	PREDICTED: similar to AGAP005012-PA [Tri	0.634	0.159	0.684	5e-22
332374818	459	unknown [Dendroctonus ponderosae]	0.739	0.185	0.611	2e-21
345484614	393	PREDICTED: N-acetylgalactosamine kinase-	0.617	0.180	0.661	2e-20
157108098	470	galactokinase [Aedes aegypti] gi|1088685	0.643	0.157	0.594	9e-20
195442597	490	GK12284 [Drosophila willistoni] gi|19416	0.634	0.148	0.608	2e-19
198466891	492	GA18788 [Drosophila pseudoobscura pseudo	0.634	0.148	0.608	2e-19
195174532	492	GL15042 [Drosophila persimilis] gi|19411	0.634	0.148	0.608	2e-19
242017545	471	N-acetylgalactosamine kinase, putative [	0.617	0.150	0.619	3e-19
21355577	490	galactokinase, isoform B [Drosophila mel	0.634	0.148	0.608	3e-19
195588925	490	GD12949 [Drosophila simulans] gi|1941962	0.634	0.148	0.608	3e-19

>gi|91079260|ref|XP_971902.1| PREDICTED: similar to AGAP005012-PA [Tribolium castaneum] gi|270004305|gb|EFA00753.1| hypothetical protein TcasGA2_TC003637 [Tribolium castaneum]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 60/73 (82%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
           +GTQGGGMDQAIAFLA+ GCAK I+F PLRS D+ LP  AVFV+A SLA  NKA +++FN
Sbjct: 187 IGTQGGGMDQAIAFLATEGCAKLIEFSPLRSTDITLPPGAVFVIAHSLAKLNKAATADFN 246

Query: 62  TRVVECRLSAKWI 74
            RVVECRL+A+ I
Sbjct: 247 CRVVECRLAAQLI 259

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332374818|gb|AEE62550.1| unknown [Dendroctonus ponderosae]

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/85 (61%), Positives = 61/85 (71%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
           +GTQGGGMDQAIA+LA  GCAK I+F PLRS +V LPS AVFV+A SL   NKA + +FN
Sbjct: 182 IGTQGGGMDQAIAYLAKEGCAKLIEFEPLRSTEVKLPSDAVFVIAHSLTNLNKAATGDFN 241

Query: 62  TRVVECRLSAKWIPHLQTPQQSYIK 86
            RVVECRL+A+ I   Q      IK
Sbjct: 242 CRVVECRLAAQIIAKKQELDWRKIK 266

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345484614|ref|XP_001605570.2| PREDICTED: N-acetylgalactosamine kinase-like [Nasonia vitripennis]

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/71 (66%), Positives = 57/71 (80%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
           +GTQGGGMDQAIAFL   G AK I+F+PLR  DV LP  AVFV+A SLA  NKA +++FN
Sbjct: 199 IGTQGGGMDQAIAFLGKAGSAKLIEFNPLRGFDVTLPDDAVFVIAHSLADHNKAATNDFN 258

Query: 62  TRVVECRLSAK 72
           TRV+ECRL+A+
Sbjct: 259 TRVLECRLAAQ 269

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157108098|ref|XP_001650075.1| galactokinase [Aedes aegypti] gi|108868583|gb|EAT32808.1| AAEL014958-PA [Aedes aegypti]

 Score =  100 bits (250), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 59/74 (79%)

Query: 1   MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
            +GTQGGGMDQAIA+LA  GCA+ I+++PLR+  + LPS AVFV+A SL   NKA +S+F
Sbjct: 185 FIGTQGGGMDQAIAYLAKQGCAQFIEWNPLRATSINLPSNAVFVIANSLTEANKAATSDF 244

Query: 61  NTRVVECRLSAKWI 74
           N RVVECRL+ +++
Sbjct: 245 NQRVVECRLACRFL 258

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195442597|ref|XP_002069039.1| GK12284 [Drosophila willistoni] gi|194165124|gb|EDW80025.1| GK12284 [Drosophila willistoni]

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 1/74 (1%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
           +GT  GGMDQAIA+L   GCA HI+FHP L+   V LP+   FVVA SLA KNKA SS++
Sbjct: 204 IGTHSGGMDQAIAYLGKEGCAHHIEFHPKLKGTPVTLPAGKCFVVANSLAQKNKAASSDY 263

Query: 61  NTRVVECRLSAKWI 74
           N RVVECRL+ +W+
Sbjct: 264 NERVVECRLATRWL 277

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198466891|ref|XP_001354171.2| GA18788 [Drosophila pseudoobscura pseudoobscura] gi|198149601|gb|EAL31223.2| GA18788 [Drosophila pseudoobscura pseudoobscura]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 1/74 (1%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
           +GT  GGMDQAIA+L   GCA HI+FHP L    V+LP+   FVVA SLA KNKA SS++
Sbjct: 205 IGTHSGGMDQAIAYLGREGCAHHIEFHPQLNGTPVILPAGKCFVVANSLAQKNKAASSDY 264

Query: 61  NTRVVECRLSAKWI 74
           N RVVECRL+ +W+
Sbjct: 265 NERVVECRLATRWL 278

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195174532|ref|XP_002028027.1| GL15042 [Drosophila persimilis] gi|194115749|gb|EDW37792.1| GL15042 [Drosophila persimilis]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 1/74 (1%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
           +GT  GGMDQAIA+L   GCA HI+FHP L    V+LP+   FVVA SLA KNKA SS++
Sbjct: 205 IGTHSGGMDQAIAYLGREGCAHHIEFHPQLNGTPVILPAGKCFVVANSLAQKNKAASSDY 264

Query: 61  NTRVVECRLSAKWI 74
           N RVVECRL+ +W+
Sbjct: 265 NERVVECRLATRWL 278

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017545|ref|XP_002429248.1| N-acetylgalactosamine kinase, putative [Pediculus humanus corporis] gi|212514144|gb|EEB16510.1| N-acetylgalactosamine kinase, putative [Pediculus humanus corporis]

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/71 (61%), Positives = 55/71 (77%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
           +GT GGGMDQAI+FLA+ GCAKHI F PL+S D+ LP  A+FV+A SL   NKA + +FN
Sbjct: 189 IGTLGGGMDQAISFLATKGCAKHISFDPLKSTDLKLPDGALFVIAHSLIQMNKAATQDFN 248

Query: 62  TRVVECRLSAK 72
            RVVECRL+ +
Sbjct: 249 CRVVECRLACQ 259

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|21355577|ref|NP_648276.1| galactokinase, isoform B [Drosophila melanogaster] gi|24661285|ref|NP_729438.1| galactokinase, isoform A [Drosophila melanogaster] gi|24661292|ref|NP_729439.1| galactokinase, isoform C [Drosophila melanogaster] gi|320545715|ref|NP_001189074.1| galactokinase, isoform D [Drosophila melanogaster] gi|16197845|gb|AAL13566.1| GH11113p [Drosophila melanogaster] gi|23093843|gb|AAF50338.2| galactokinase, isoform A [Drosophila melanogaster] gi|23093844|gb|AAF50337.2| galactokinase, isoform B [Drosophila melanogaster] gi|23093845|gb|AAN11980.1| galactokinase, isoform C [Drosophila melanogaster] gi|220945346|gb|ACL85216.1| CG5288-PC [synthetic construct] gi|220955236|gb|ACL90161.1| CG5288-PA [synthetic construct] gi|318069171|gb|ADV37511.1| galactokinase, isoform D [Drosophila melanogaster]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 1/74 (1%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
           +GT  GGMDQAIA+L   GCA HI+FHP L+   V LP+   FVVA SLA KNKA SS++
Sbjct: 203 IGTHSGGMDQAIAYLGRVGCAHHIEFHPKLKGTPVTLPAGKCFVVANSLAQKNKAASSDY 262

Query: 61  NTRVVECRLSAKWI 74
           N RVVECRL+ +W+
Sbjct: 263 NERVVECRLATRWL 276

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195588925|ref|XP_002084207.1| GD12949 [Drosophila simulans] gi|194196216|gb|EDX09792.1| GD12949 [Drosophila simulans]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 1/74 (1%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
           +GT  GGMDQAIA+L   GCA HI+FHP L+   V LP+   FVVA SLA KNKA SS++
Sbjct: 203 IGTHSGGMDQAIAYLGRVGCAHHIEFHPKLKGTPVTLPAGKCFVVANSLAQKNKAASSDY 262

Query: 61  NTRVVECRLSAKWI 74
           N RVVECRL+ +W+
Sbjct: 263 NERVVECRLATRWL 276

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
FB|FBgn0263199	490	Galk "Galactokinase" [Drosophi	0.634	0.148	0.608	4.7e-19
UNIPROTKB|B3KUV8	207	GALK2 "N-acetylgalactosamine k	0.695	0.386	0.575	6.5e-19
UNIPROTKB|F1MFK7	447	GALK2 "Uncharacterized protein	0.747	0.192	0.540	7.6e-19
UNIPROTKB|B7ZAX5	434	GALK2 "cDNA, FLJ79339, highly	0.695	0.184	0.575	2.5e-18
UNIPROTKB|Q01415	458	GALK2 "N-acetylgalactosamine k	0.695	0.174	0.575	2.9e-18
RGD|1308691	458	Galk2 "galactokinase 2" [Rattu	0.617	0.155	0.633	2.9e-18
UNIPROTKB|F1SQG6	458	GALK2 "Uncharacterized protein	0.617	0.155	0.633	3.8e-18
UNIPROTKB|E2RDA6	458	GALK2 "Uncharacterized protein	0.617	0.155	0.619	4.9e-18
ZFIN|ZDB-GENE-041114-143	457	galk2 "galactokinase 2" [Danio	0.634	0.159	0.602	1e-17
MGI|MGI:1917226	458	Galk2 "galactokinase 2" [Mus m	0.617	0.155	0.619	1.3e-17

FB|FBgn0263199 Galk "Galactokinase" [Drosophila melanogaster (taxid:7227)]

 Score = 235 (87.8 bits), Expect = 4.7e-19, P = 4.7e-19
 Identities = 45/74 (60%), Positives = 55/74 (74%)

Query:     2 LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
             +GT  GGMDQAIA+L   GCA HI+FHP L+   V LP+   FVVA SLA KNKA SS++
Sbjct:   203 IGTHSGGMDQAIAYLGRVGCAHHIEFHPKLKGTPVTLPAGKCFVVANSLAQKNKAASSDY 262

Query:    61 NTRVVECRLSAKWI 74
             N RVVECRL+ +W+
Sbjct:   263 NERVVECRLATRWL 276

GO:0004335 "galactokinase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0046835 "carbohydrate phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|B3KUV8 GALK2 "N-acetylgalactosamine kinase" [Homo sapiens (taxid:9606)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 46/80 (57%), Positives = 59/80 (73%)

Query:     2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
             +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN
Sbjct:    53 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 112

Query:    62 TRVVECRLSAKWIPHLQTPQ 81
              RV+ECRL+AK +   ++ Q
Sbjct:   113 IRVMECRLAAKLLAKYKSLQ 132

GO:0005737 "cytoplasm" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

UNIPROTKB|F1MFK7 GALK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 232 (86.7 bits), Expect = 7.6e-19, P = 7.6e-19
 Identities = 47/87 (54%), Positives = 62/87 (71%)

Query:     2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
             +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN
Sbjct:   171 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 230

Query:    62 TRVVECRLSAKWIP-HLQTPQQSYIKI 87
              RV+ECRL+AK +  H   P +  +++
Sbjct:   231 IRVMECRLAAKLLAKHKSLPWKEVLRL 257

GO:0005524 "ATP binding" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004335 "galactokinase activity" evidence=IEA

UNIPROTKB|B7ZAX5 GALK2 "cDNA, FLJ79339, highly similar to N-acetylgalactosamine kinase (EC 2.7.1.157)" [Homo sapiens (taxid:9606)]

 Score = 227 (85.0 bits), Expect = 2.5e-18, P = 2.5e-18
 Identities = 46/80 (57%), Positives = 59/80 (73%)

Query:     2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
             +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN
Sbjct:   158 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 217

Query:    62 TRVVECRLSAKWIPHLQTPQ 81
              RV+ECRL+AK +   ++ Q
Sbjct:   218 IRVMECRLAAKLLAKYKSLQ 237

GO:0004335 "galactokinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q01415 GALK2 "N-acetylgalactosamine kinase" [Homo sapiens (taxid:9606)]

 Score = 227 (85.0 bits), Expect = 2.9e-18, P = 2.9e-18
 Identities = 46/80 (57%), Positives = 59/80 (73%)

Query:     2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
             +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN
Sbjct:   182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 241

Query:    62 TRVVECRLSAKWIPHLQTPQ 81
              RV+ECRL+AK +   ++ Q
Sbjct:   242 IRVMECRLAAKLLAKYKSLQ 261

GO:0005737 "cytoplasm" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0033858 "N-acetylgalactosamine kinase activity" evidence=IEA

GO:0004335 "galactokinase activity" evidence=IDA

GO:0005975 "carbohydrate metabolic process" evidence=TAS

RGD|1308691 Galk2 "galactokinase 2" [Rattus norvegicus (taxid:10116)]

 Score = 227 (85.0 bits), Expect = 2.9e-18, P = 2.9e-18
 Identities = 45/71 (63%), Positives = 55/71 (77%)

Query:     2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
             +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN
Sbjct:   182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 241

Query:    62 TRVVECRLSAK 72
              RV+ECRL+AK
Sbjct:   242 VRVMECRLAAK 252

GO:0004335 "galactokinase activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0033858 "N-acetylgalactosamine kinase activity" evidence=IEA

UNIPROTKB|F1SQG6 GALK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 226 (84.6 bits), Expect = 3.8e-18, P = 3.8e-18
 Identities = 45/71 (63%), Positives = 55/71 (77%)

Query:     2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
             +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN
Sbjct:   182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 241

Query:    62 TRVVECRLSAK 72
              RV+ECRL+AK
Sbjct:   242 IRVMECRLAAK 252

GO:0005524 "ATP binding" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004335 "galactokinase activity" evidence=IEA

UNIPROTKB|E2RDA6 GALK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 225 (84.3 bits), Expect = 4.9e-18, P = 4.9e-18
 Identities = 44/71 (61%), Positives = 55/71 (77%)

Query:     2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
             +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS A+FV+A S    NKA +S FN
Sbjct:   182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAIFVIANSCVEMNKAATSHFN 241

Query:    62 TRVVECRLSAK 72
              RV+ECRL+AK
Sbjct:   242 IRVMECRLAAK 252

GO:0005524 "ATP binding" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004335 "galactokinase activity" evidence=IEA

ZFIN|ZDB-GENE-041114-143 galk2 "galactokinase 2" [Danio rerio (taxid:7955)]

 Score = 222 (83.2 bits), Expect = 1.0e-17, P = 1.0e-17
 Identities = 44/73 (60%), Positives = 54/73 (73%)

Query:     2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
             +GT+GGGMDQ+I+FLA  G AK I+F+PLR+ DV LP  AVFV+A      NKA SS FN
Sbjct:   181 IGTEGGGMDQSISFLAEEGTAKLIEFNPLRATDVKLPDGAVFVIANCCVEMNKAASSHFN 240

Query:    62 TRVVECRLSAKWI 74
              RVVECRL+ K +
Sbjct:   241 MRVVECRLATKML 253

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0046835 "carbohydrate phosphorylation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0004335 "galactokinase activity" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

MGI|MGI:1917226 Galk2 "galactokinase 2" [Mus musculus (taxid:10090)]

 Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 44/71 (61%), Positives = 55/71 (77%)

Query:     2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
             +GT+GGGMDQ+I+FLA  G AK I+F PLR+ +V LPS AVFV+A S    NKA +S FN
Sbjct:   182 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATNVKLPSGAVFVIANSCMEMNKAATSHFN 241

Query:    62 TRVVECRLSAK 72
              RV+ECRL+AK
Sbjct:   242 VRVMECRLAAK 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004335 "galactokinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0033858 "N-acetylgalactosamine kinase activity" evidence=IEA

GO:0046835 "carbohydrate phosphorylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R6J8	GALK2_PONAB	2, ., 7, ., 1, ., 1, 5, 7	0.575	0.6956	0.1746	yes	N/A
Q68FH4	GALK2_MOUSE	2, ., 7, ., 1, ., 1, 5, 7	0.6197	0.6173	0.1550	yes	N/A
Q5XIG6	GALK2_RAT	2, ., 7, ., 1, ., 1, 5, 7	0.6338	0.6173	0.1550	yes	N/A
Q9SEE5	GALK1_ARATH	2, ., 7, ., 1, ., 6	0.5138	0.6086	0.1411	yes	N/A
Q01415	GALK2_HUMAN	2, ., 7, ., 1, ., 1, 5, 7	0.575	0.6956	0.1746	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	115
PLN02521	497	PLN02521, PLN02521, galactokinase	4e-26
COG0153	390	COG0153, GalK, Galactokinase [Carbohydrate transpo	2e-09
TIGR00131	386	TIGR00131, gal_kin, galactokinase	1e-06
PLN02865	423	PLN02865, PLN02865, galactokinase	1e-04

>gnl|CDD|215285 PLN02521, PLN02521, galactokinase

 Score =  100 bits (251), Expect = 4e-26
 Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 2/71 (2%)

Query: 3   GTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQ--SSEF 60
           GTQ GGMDQAI+ +A  G AK I F+P+R+ DV LP+   FV+A SLA  NKA   ++ +
Sbjct: 203 GTQSGGMDQAISIMAQQGVAKLIDFNPVRATDVQLPAGGTFVIANSLAESNKAVTAATNY 262

Query: 61  NTRVVECRLSA 71
           N RVVECRL+A
Sbjct: 263 NNRVVECRLAA 273

Length = 497

>gnl|CDD|223231 COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism]

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAV-FVVAQSLATKNKAQSSEF 60
           +G   G MDQ  +       A  +    L  E V  P   V  V+  S   +  A  SE+
Sbjct: 169 VGVNCGIMDQLASAFGKKDHALLLDCRTLEYEPVPFPVGGVSIVIVNSNVKRELA-DSEY 227

Query: 61  NTRVVECRLSAK 72
           N R  EC  +A+
Sbjct: 228 NERRAECEEAAE 239

Length = 390

>gnl|CDD|232841 TIGR00131, gal_kin, galactokinase

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAV-FVVAQSLATKNKAQSSEF 60
           +G   G MDQA + L     A  ++   L++     P   + FV+A +   +  A  S +
Sbjct: 164 VGVNCGIMDQAASVLGKEDHALLVECRSLKATPFKFPQLGIAFVIANTNVKRTLA-PSNY 222

Query: 61  NTRVVECRLSAK 72
           NTR  EC  +A 
Sbjct: 223 NTRRQECTTAAN 234

Galactokinase is a member of the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase) and shares with them an amino-terminal domain probably related to ATP binding.The galactokinases found by This model are divided into two sets. Prokaryotic forms are generally shorter. The eukaryotic forms are longer because of additional central regions and in some cases are known to be bifunctional, with regulatory activities that are independent of galactokinase activity [Energy metabolism, Sugars]. Length = 386

>gnl|CDD|215466 PLN02865, PLN02865, galactokinase

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAV-------FVVAQSLATKNK 54
           LG + G +DQ+   L+  GC   +    L  + V L  Q          ++A S      
Sbjct: 185 LGLRNGILDQSAILLSRYGCLTFMDCKTLDHKLVSLQFQQPGGEKPFKILLAFSGLRHAL 244

Query: 55  AQSSEFNTRVVECRLSAK 72
                +N RV EC+ +A+
Sbjct: 245 TNKPGYNLRVSECQEAAR 262

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	115
COG0153	390	GalK Galactokinase [Carbohydrate transport and met	99.93
PTZ00290	468	galactokinase; Provisional	99.91
PLN02865	423	galactokinase	99.89
PLN02521	497	galactokinase	99.86
PRK05322	387	galactokinase; Provisional	99.82
PRK05101	382	galactokinase; Provisional	99.74
TIGR00131	386	gal_kin galactokinase. The galactokinases found by	99.74
PRK00555	363	galactokinase; Provisional	99.71
KOG0631|consensus	489		99.53
PRK03817	351	galactokinase; Provisional	99.42
PLN02677	387	mevalonate kinase	97.07
TIGR00549	273	mevalon_kin mevalonate kinase. Paracoccus exhibits	96.17
TIGR01220	358	Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-typ	95.78
PTZ00298	328	mevalonate kinase; Provisional	94.72
PRK03926	302	mevalonate kinase; Provisional	89.32
PRK13412	974	fkp bifunctional fucokinase/L-fucose-1-P-guanylylt	82.13

>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism]

Probab=99.93  E-value=1.4e-26  Score=191.93  Aligned_cols=75  Identities=27%  Similarity=0.383  Sum_probs=72.7

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCC-CcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcch
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPS-QAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPH   76 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~-~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk   76 (115)
                      |+|++||||||++|++|++|||++|||++|+++++|||. +++|||+|||++|.++. ++||+||+||++|++.|++
T Consensus       168 fvGvn~G~mDQ~~s~~G~~~~al~ld~~~l~~~~~~~p~~~~~ivI~ns~vkr~la~-seYn~Rr~ece~A~~~l~~  243 (390)
T COG0153         168 FVGVNCGIMDQLASAFGKKDHALLLDCRTLEYEPVPFPVGGVSIVIVNSNVKRELAD-SEYNERRAECEEAAEFLGV  243 (390)
T ss_pred             ccCCcCchHHHHHHHhCCCCcEEEEEcccCceEEeccCccceEEEEecCCCccccch-hHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999997 59999999999999875 9999999999999999999

>PTZ00290 galactokinase; Provisional

Probab=99.91  E-value=1.4e-24  Score=183.77  Aligned_cols=78  Identities=21%  Similarity=0.189  Sum_probs=72.2

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCC----CCcEEEEEeCCccccccC--CCchHHHHHHHHHHHHHc
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLP----SQAVFVVAQSLATKNKAQ--SSEFNTRVVECRLSAKWI   74 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp----~~~~~vV~nS~v~h~l~~--~s~Yn~Rr~eCe~Aa~~L   74 (115)
                      |+|++||||||++|++|++|||++|||++++++++|++    +++.|+|+||+++|++++  +++||+||.||++|+++|
T Consensus       207 ~vGv~cGiMDQ~asa~g~~~~al~iD~~~l~~~~v~l~~~~~~~~~~vV~nS~v~h~l~~s~~~~Yn~Rr~ece~a~~~L  286 (468)
T PTZ00290        207 FCGVNVGIMDQFISAFAEEDKFMFLDCKSLTFESHDMTPLLGDGACFLLIDSMIKHDLLGGTAGMYNTVRSDQEGAQKKI  286 (468)
T ss_pred             hcCCCcchhhHHHHHhCCCCcEEEEecCCCeEEEeccCCCCCCCcEEEEEeCCCcchhccccchhhHHHHHHHHHHHHHh
Confidence            79999999999999999999999999999999999986    489999999999999875  239999999999999999


Q ss_pred             chhc
Q psy7886          75 PHLQ   78 (115)
Q Consensus        75 gk~~   78 (115)
                      ++..
T Consensus       287 ~~~~  290 (468)
T PTZ00290        287 GKHR  290 (468)
T ss_pred             cccc
Confidence            8654

>PLN02865 galactokinase

Probab=99.89  E-value=1.4e-23  Score=175.83  Aligned_cols=81  Identities=23%  Similarity=0.358  Sum_probs=74.8

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCC-------CCcEEEEEeCCccccccCCCchHHHHHHHHHHHHH
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLP-------SQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKW   73 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp-------~~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~   73 (115)
                      |+|++||+|||++|++|++|++++|||+|++++++|||       .++.|+|+||+++|.+.++++||+||.||++|+++
T Consensus       184 ~~G~~~G~mDQ~as~~~~~g~~~~iDf~~l~~~~vpl~~~~~~~~~~~~ivv~~s~~~h~l~~~~~Yn~Rr~Ec~~aa~~  263 (423)
T PLN02865        184 YLGLRNGILDQSAILLSRYGCLTFMDCKTLDHKLVSLQFQQPGGEKPFKILLAFSGLRHALTNKPGYNLRVSECQEAARF  263 (423)
T ss_pred             hcCCCCccccHHHHHhcccCceEEEEccCCCcceeecCcccccCCCCeEEEEEeCCCchhhcccchhhHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999987       37899999999999876358999999999999999


Q ss_pred             cchhcCCC
Q psy7886          74 IPHLQTPQ   81 (115)
Q Consensus        74 Lgk~~g~~   81 (115)
                      |++++|+.
T Consensus       264 l~~~~~~~  271 (423)
T PLN02865        264 LLEASGND  271 (423)
T ss_pred             HHHhcCCc
Confidence            99888753

>PLN02521 galactokinase

Probab=99.86  E-value=1.2e-21  Score=166.82  Aligned_cols=81  Identities=49%  Similarity=0.762  Sum_probs=74.7

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCcccccc--CCCchHHHHHHHHHHHHHcchhc
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKA--QSSEFNTRVVECRLSAKWIPHLQ   78 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h~l~--~~s~Yn~Rr~eCe~Aa~~Lgk~~   78 (115)
                      ++|++||+|||++|++|++|++++|||+|++++++|+|.++.|||+||+++|.+.  .++.||+||+||+.|+++|++++
T Consensus       201 ~~g~~~g~mDq~as~~g~~g~al~~d~~~l~~~~v~~p~~~~~vv~~s~v~~~k~~~a~~~Yn~R~~ec~~Aa~~L~~~~  280 (497)
T PLN02521        201 HIGTQSGGMDQAISIMAQQGVAKLIDFNPVRATDVQLPAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLAVKL  280 (497)
T ss_pred             ccCCCCChHHHHHHHhcCCCcEEEEecCCCceEEeecCCCcEEEEEECCCcccccccccccccHHHHHHHHHHHHHHhhc
Confidence            5799999999999999999999999999999999999999999999999777643  24899999999999999999988


Q ss_pred             CCC
Q psy7886          79 TPQ   81 (115)
Q Consensus        79 g~~   81 (115)
                      +++
T Consensus       281 ~~~  283 (497)
T PLN02521        281 GMS  283 (497)
T ss_pred             CCc
Confidence            875

>PRK05322 galactokinase; Provisional

Probab=99.82  E-value=4.1e-20  Score=152.34  Aligned_cols=79  Identities=23%  Similarity=0.260  Sum_probs=73.7

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCC-CcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcchhcC
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPS-QAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQT   79 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~-~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk~~g   79 (115)
                      |+|++||+|||+++++|++|+++++||++++++++|+|. ++.|+|+||+++|.+. +++||.||.||++|++.++++++
T Consensus       165 ~~G~~sG~mDq~as~~G~~~~~~~~d~~~~~~~~~~~~~~~~~lvv~dsg~~~~~~-~~~yn~r~~e~~~a~~~l~~~~~  243 (387)
T PRK05322        165 FIGVNSGIMDQFAIGMGKKDHAILLDCNTLEYEYVPLDLGDYVIVIMNTNKRRELA-DSKYNERRAECEKALEELQKKLD  243 (387)
T ss_pred             cCCCCcchHHHHHHHhccCCeEEEEecCCCceEEeccCCCCeEEEEEECCCccccC-cchhhHHHHHHHHHHHHHhhhcC
Confidence            679999999999999999999999999999999999984 7889999999999876 49999999999999999998776


Q ss_pred             C
Q psy7886          80 P   80 (115)
Q Consensus        80 ~   80 (115)
                      +
T Consensus       244 ~  244 (387)
T PRK05322        244 I  244 (387)
T ss_pred             c
Confidence            5

>PRK05101 galactokinase; Provisional

Probab=99.74  E-value=4.3e-18  Score=140.03  Aligned_cols=77  Identities=27%  Similarity=0.396  Sum_probs=72.3

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcchhc
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQ   78 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk~~   78 (115)
                      |+|++||+|||+++++|++|+++++||++++++++|+|+++.|+|+||+++|++. +++||+||+||++|++.+++..
T Consensus       165 ~~G~~~G~~Dq~~s~~G~~~~~~~~d~~~~~~~~~~~~~~~~~vv~~sg~~~~l~-~~~y~~r~~e~~~A~~~l~~~~  241 (382)
T PRK05101        165 FVGCNCGIMDQLISALGKKDHALLIDCRSLETKAVPMPEGVAVVIINSNVKRGLV-DSEYNTRRQQCETAARFFGVKA  241 (382)
T ss_pred             hcCCCCccHHHHHHHcCCCCeEEEEEcCCCceEEeeCCCCcEEEEEeCCCCcccc-ccchhHHHHHHHHHHHHhChHh
Confidence            5799999999999999999999999999999999999999999999999999876 5999999999999999988654

>TIGR00131 gal_kin galactokinase

Probab=99.74  E-value=4.4e-18  Score=139.39  Aligned_cols=76  Identities=28%  Similarity=0.451  Sum_probs=71.6

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCC-CcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcchh
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPS-QAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHL   77 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~-~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk~   77 (115)
                      |.|++||+|||+++++|++|+++++||++++++++|+|+ ++.|+|+||+++|++. ++.||.||+||+.|++.|++.
T Consensus       163 ~~G~~~g~~Dq~~s~~G~~~~~l~~~~~~~~~~~~~~~~~~~~lvv~~s~~~~~t~-~~~y~~r~~e~~~a~~~l~~~  239 (386)
T TIGR00131       163 FVGVNCGIMDQAASVLGKEDHALLVECRSLKATPFKFPQLGIAFVIANTNVKRTLA-PSNYNTRRQECTTAANFLAAT  239 (386)
T ss_pred             ccCCCcchHHHHHHHhccCCcEEEEEcCCCceeeecCCCCCeEEEEEeCCCccccc-cchhHHHHHHHHHHHHHhccc
Confidence            579999999999999999999999999999999999997 8999999999999876 489999999999999999865

The galactokinases found by this model are divided into two sets. Prokaryotic forms are generally shorter. The eukaryotic forms are longer because of additional central regions and in some cases are known to be bifunctional, with regulatory activities that are independent of galactokinase activity.

>PRK00555 galactokinase; Provisional

Probab=99.71  E-value=3.1e-17  Score=134.36  Aligned_cols=75  Identities=25%  Similarity=0.374  Sum_probs=68.9

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCC---CcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcch
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPS---QAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPH   76 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~---~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk   76 (115)
                      |+|++||+|||+++++|+.|+++++||++++++++|+|+   ++.|+|+||+++|.+. +++||.||++|+.|++.++.
T Consensus       144 ~~G~~~G~~Dq~as~~G~~~~~~~~d~~~~~~~~v~~~~~~~~~~lvv~~s~~~~~~~-~~~y~~rr~~~~~~~~~~~~  221 (363)
T PRK00555        144 YVGAPTGLLDQLAALFGAPKTALLIDFRDLTVRPVAFDPDAAGVVLLLMDSRARHRHA-GGEYAARRASCERAAADLGV  221 (363)
T ss_pred             hCCCCCChhHHHHHHhCCCCeEEEEEcCCCcEEEeccCCCcCceEEEEEcCCCccccc-chhhHHHHHHHHHHHHHhCc
Confidence            589999999999999999999999999999999999985   4689999999999765 48999999999999998864

>KOG0631|consensus

Probab=99.53  E-value=3.3e-15  Score=126.93  Aligned_cols=109  Identities=32%  Similarity=0.452  Sum_probs=88.7

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEee--cCCCceeeeeCCCCcEEEEEeCCcccccc--CCCchHHHHHHHHHHHHHcch
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQ--FHPLRSEDVVLPSQAVFVVAQSLATKNKA--QSSEFNTRVVECRLSAKWIPH   76 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allID--c~~l~~~~vplp~~~~~vV~nS~v~h~l~--~~s~Yn~Rr~eCe~Aa~~Lgk   76 (115)
                      |+|+++|+|||++|++|++|+|++||  +.|++...+++|++-+|+|.||.+..++.  ..+.||.|+.||..|+..+++
T Consensus       197 ~~G~~~gGmdq~asvl~~~~~Al~v~~~~~Pf~~~~lk~~~~~vfvI~~~L~~~nk~~~a~tnynlRv~E~~ia~~~la~  276 (489)
T KOG0631|consen  197 YIGLNSGGMDQAASVLAEKGHALLVDPYFTPFRRSMLKLPDGGVFVIANSLVESNKAETAETNYNLRVVEGTIAAGELAA  276 (489)
T ss_pred             ccCcCCCcHHHHHHHHHhcCceEEecccCCccccccccCCCCceEEEechhhhhcchhhhhhhhhceeEeeehhhHHHHH
Confidence            68999999999999999999999999  56999999999998899999999999984  368999999999999999999


Q ss_pred             hcCCChhhhhhhh-cccchhhHhhhcCCHHHHHhhc
Q psy7886          77 LQTPQQSYIKINM-KKRNFLKGSLQDASYNIMLQKL  111 (115)
Q Consensus        77 ~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~  111 (115)
                      +++++.+.+-.+- .-+. |+| ..-.++.-|.++|
T Consensus       277 k~~~~~~~~~~~~~~~~~-~~~-~i~~~~~~~~~~l  310 (489)
T KOG0631|consen  277 KILVELPAYILRYQLQRA-WRG-DIGEGYERAEEML  310 (489)
T ss_pred             HhhcccHHHHHhhhhhhc-ccc-ccchhHHHHHHHH
Confidence            9999887222111 1222 666 4466666443333

>PRK03817 galactokinase; Provisional

Probab=99.42  E-value=3.3e-13  Score=109.18  Aligned_cols=77  Identities=26%  Similarity=0.292  Sum_probs=70.4

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcchhc
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQ   78 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk~~   78 (115)
                      +.|+++|+|||+++++|++++++++|++++.++++|+|+++.|+|++|+++|++. +..||+||++|++|++.|++.+
T Consensus       139 ~~g~~~g~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~sg~~~~~~-~~~~~~~~~~~~~~~~~l~~~~  215 (351)
T PRK03817        139 FVGVPCGIMDQFAVAFGKKDHAIFLDTMTLEYEYVPFPEDYEILVFDTGVKRELA-SSEYNERRQECEEALKILGKKS  215 (351)
T ss_pred             ccCCCCcCchhhheeeccCCEEEEEecCCCceEEEecCCCcEEEEEeCCCccccc-cchhHHHHHHHHHHHHHhCccc
Confidence            4689999999999999999999999999999999999999999999999998654 4789999999999999987643

>PLN02677 mevalonate kinase

Probab=97.07  E-value=0.00074  Score=56.59  Aligned_cols=47  Identities=13%  Similarity=0.198  Sum_probs=40.7

Q ss_pred             CcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCccccc
Q psy7886           2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNK   54 (115)
Q Consensus         2 vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h~l   54 (115)
                      -|.++|+ |++++.+|.     +|+|++...++++.|.++.|+|+||+++|+.
T Consensus       197 hG~pSGi-D~a~s~~Gg-----~I~f~~~~~~~l~~~~~l~llv~dTgv~~sT  243 (387)
T PLN02677        197 HGKPSGI-DNTVSTYGN-----MIKFKSGELTRLQSNMPLKMLITNTRVGRNT  243 (387)
T ss_pred             hCCCCch-hHHHHhcCC-----eEEEcCCCceecCCCCCceEEEEECCCCCcH
Confidence            4788997 999999985     7888888888888888899999999999964

>TIGR00549 mevalon_kin mevalonate kinase

Probab=96.17  E-value=0.011  Score=45.70  Aligned_cols=49  Identities=14%  Similarity=0.139  Sum_probs=36.2

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCccccc
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNK   54 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h~l   54 (115)
                      +.|.+|| +||+++++|   ..+++|++... ..++.|.+..++|++|+++|+.
T Consensus       131 ~~G~~sG-~D~~~~~~G---g~~~~~~~~~~-~~~~~~~~~~lvl~~tg~~~~T  179 (273)
T TIGR00549       131 AHGKPSG-IDTATSTYG---GPVYFEKGEGE-FTKLISLDGYFVIADTGVSGST  179 (273)
T ss_pred             hCCCCch-HhHHHHhcC---CeEEEEcCCCc-eeeccCCCeEEEEEECCCCCcH
Confidence            3588899 599999996   46677876543 2344455788999999999864

Paracoccus exhibits two genes within the phosphomevalonate/mevalonate kinase family, one of which falls between trusted and noise cutoffs of this model. The degree of divergence is high, but if the trees created from this model are correct, the proper names of these genes have been swapped.

>TIGR01220 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-type, Gram-positive branch

Probab=95.78  E-value=0.0056  Score=50.29  Aligned_cols=47  Identities=11%  Similarity=0.029  Sum_probs=36.1

Q ss_pred             chHHHHHHHhc------CCCceEEeec--------------CCCceeeeeCCCCcEEEEEeCCcccc
Q psy7886           7 GGMDQAIAFLA------SPGCAKHIQF--------------HPLRSEDVVLPSQAVFVVAQSLATKN   53 (115)
Q Consensus         7 GiMDQ~as~~g------k~g~allIDc--------------~~l~~~~vplp~~~~~vV~nS~v~h~   53 (115)
                      +..||+++++|      +.++..++|+              +++.++++++|+++.|+|++|+++++
T Consensus       162 sg~D~~a~~~GG~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~l~v~~tg~~~~  228 (358)
T TIGR01220       162 SCGDIAASTYGGWIAYSTFDHDWVLQLARRVGVDRTLKAPWPGLSIRPLPAPKGLTLLIGWTGSPAS  228 (358)
T ss_pred             CcchhhhhhhCCEEEEecCCHHHHhhhhhccchhhhhccCCCccceeECCCCCCCEEEEEeCCCCcC
Confidence            34599999976      3455555554              34678899998899999999999985

This enzyme is part of the mevalonate pathway, one of two alternative pathways for the biosynthesis of IPP. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the animal type and this ERG8 type. This model represents the low GC Gram-positive organism forms of the ERG8 type of phosphomevalonate kinase.

>PTZ00298 mevalonate kinase; Provisional

Probab=94.72  E-value=0.092  Score=42.43  Aligned_cols=50  Identities=16%  Similarity=0.118  Sum_probs=36.3

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCC--CceeeeeCCCCcEEEEEeCCccccc
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHP--LRSEDVVLPSQAVFVVAQSLATKNK   54 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~--l~~~~vplp~~~~~vV~nS~v~h~l   54 (115)
                      |.|.++|+ |+.++++|.   +++.+..+  ..++++++|+++.++|++++++++.
T Consensus       147 ~~g~~sG~-D~~~~~~Gg---~~~~~~~~g~~~~~~l~~~~~~~lvv~~~~~~~sT  198 (328)
T PTZ00298        147 YHGTPSGA-DNTAATYGG---LISYRRVNGKSVFKRIAFQQPLYLVVCSTGITAST  198 (328)
T ss_pred             hcCCCChH-HHHHHHcCC---eEEEecCCCccceeEecCCCCCeEEEEECCCchhH
Confidence            35889995 999888764   44444333  2466777777888999999998854

>PRK03926 mevalonate kinase; Provisional

Probab=89.32  E-value=0.74  Score=36.25  Aligned_cols=44  Identities=11%  Similarity=0.145  Sum_probs=30.4

Q ss_pred             CcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCccccc
Q psy7886           2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNK   54 (115)
Q Consensus         2 vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h~l   54 (115)
                      .|.++| +||+++++|  |.+++.+..     ++++ +++.++|++++.+++.
T Consensus       129 ~G~~sg-~D~~~~~~G--g~~~~~~~~-----~l~~-~~~~~vl~~~~~~~sT  172 (302)
T PRK03926        129 QGAASP-TDTYVSTMG--GFVTIPDRK-----KLPF-PECGIVVGYTGSSGST  172 (302)
T ss_pred             cCCCch-HHHHHHhcC--CeEEEcCCC-----cCCC-CCceEEEEECCCCCcH
Confidence            466777 599999998  455554443     3343 3777899999988753

>PRK13412 fkp bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional

Probab=82.13  E-value=1.9  Score=40.56  Aligned_cols=50  Identities=20%  Similarity=0.072  Sum_probs=35.1

Q ss_pred             CcCccchHHHHHHHhcCCCceEEeecCC-C----ceeeeeCCC------CcEEEEEeCCccccc
Q psy7886           2 LGTQGGGMDQAIAFLASPGCAKHIQFHP-L----RSEDVVLPS------QAVFVVAQSLATKNK   54 (115)
Q Consensus         2 vG~~cGiMDQ~as~~gk~g~allIDc~~-l----~~~~vplp~------~~~~vV~nS~v~h~l   54 (115)
                      ++.++|++||+++++|   -++++++.+ .    ..+++|++.      +-.++|++|+++|..
T Consensus       779 lhg~~g~qDq~~a~~G---G~~~i~~~~~~~~~~~v~~L~~~~~~~~eLe~~LlL~yTGitR~T  839 (974)
T PRK13412        779 LTTGGGWQDQYGGVLP---GVKLLQTGAGFAQSPLVRWLPDSLFTQPEYRDCHLLYYTGITRTA  839 (974)
T ss_pred             HCCCCchhhhhhHhcC---CeEEEEecCCcccCcceeecCcchhhhhhccCcEEEEECCCeeeH
Confidence            4678899999999987   466777765 1    133444332      346999999999853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	115
2a2d_A	478	X-Ray Structure Of Human N-Acetyl Galactosamine Kin		3e-21
3v2u_C	520	Crystal Structure Of The Yeast Gal Regulon Complex		4e-04
3v5r_A	505	Crystal Structure Of The Unliganded Form Of Gal3p L		4e-04
2aj4_A	548	Crystal Structure Of Saccharomyces Cerevisiae Galac		9e-04

>pdb|2A2D|A Chain A, X-Ray Structure Of Human N-Acetyl Galactosamine Kinase Complexed With Mn-Amppnp And N-Acetyl Glactosamine Length = 478

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
           +GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN
Sbjct: 202 IGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFN 261
Query: 62  TRVVECRLSAKWIPHLQTPQ 81
            RV+ECRL+AK +   ++ Q
Sbjct: 262 IRVMECRLAAKLLAKYKSLQ 281

>pdb|3V2U|C Chain C, Crystal Structure Of The Yeast Gal Regulon Complex Of The Repressor, Gal80p, And The Transducer, Gal3p, With Galactose And Atp Length = 520

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPS----QAVFVVAQSLATKNKAQ 56
           +G   GGMDQA +       A +++F P L++     P     +  FV+A +L   NK +
Sbjct: 201 VGVNNGGMDQATSVYGEEDHALYVEFRPKLKATPFKFPQLKNHEISFVIANTLVKSNKFE 260
Query: 57  S--SEFNTRVVECRLSAKWIPHLQTPQQSYIKINMKKRNFLKGSLQD 101
           +  + +N RV+E  ++A     L T     +  +    N  +G+L+D
Sbjct: 261 TAPTNYNLRVIEVTVAAN---ALATRYSVALPSHKDNSNSERGNLRD 304

>pdb|3V5R|A Chain A, Crystal Structure Of The Unliganded Form Of Gal3p Length = 505

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLP----SQAVFVVAQSLATKNKAQ 56
           +G   GGMDQA +       A +++F P L++     P     +  FV+A +L   NK +
Sbjct: 186 VGVNNGGMDQATSVYGEEDHALYVEFRPKLKATPFKFPQLKNHEISFVIANTLVKSNKFE 245
Query: 57  S--SEFNTRVVECRLSAKWIPHLQTPQQSYIKINMKKRNFLKGSLQD 101
           +  + +N RV+E  ++A     L T     +  +    N  +G+L+D
Sbjct: 246 TAPTNYNLRVIEVTVAAN---ALATRYSVALPSHKDNSNSERGNLRD 289

>pdb|2AJ4|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Galactokinase In Complex With Galactose And Mg:amppnp Length = 548

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPS----QAVFVVAQSLATKNKAQ 56
           +G   GGMDQA +       A +++F P L++     P     +  FV+A +L   NK +
Sbjct: 229 VGVNNGGMDQAASVCGEEDHALYVEFKPQLKATPFKFPQLKNHEISFVIANTLVVSNKFE 288
Query: 57  S--SEFNTRVVECRLSA 71
           +  + +N RVVE   +A
Sbjct: 289 TAPTNYNLRVVEVTTAA 305

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	115
2a2c_A	478	N-acetylgalactosamine kinase; galactokinase, , tra	2e-23
3v2u_C	520	Protein GAL3; rossmann fold, GHMP superfamily, tra	2e-18
2cz9_A	350	Probable galactokinase; structural genomics, NPPSF	6e-09
1pie_A	419	Galactokinase; galactose, galactosemia, transferas	1e-07
1wuu_A	399	Galactokinase; galactosemia, GHMP superfamily, tra	2e-07

>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Length = 478

 Score = 92.6 bits (230), Expect = 2e-23
 Identities = 45/72 (62%), Positives = 55/72 (76%)

Query: 3   GTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFNT 62
           GT+GGGMDQ+I+FLA  G AK I+F PLR+ DV LPS AVFV+A S    NKA +S FN 
Sbjct: 203 GTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNI 262

Query: 63  RVVECRLSAKWI 74
           RV+ECRL+AK +
Sbjct: 263 RVMECRLAAKLL 274

>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A* Length = 520

 Score = 78.3 bits (192), Expect = 2e-18
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 7/81 (8%)

Query: 1   MLGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPS----QAVFVVAQSLATKNKA 55
            +G   GGMDQA +       A +++F P L++     P     +  FV+A +L   NK 
Sbjct: 200 YVGVNNGGMDQATSVYGEEDHALYVEFRPKLKATPFKFPQLKNHEISFVIANTLVKSNKF 259

Query: 56  Q--SSEFNTRVVECRLSAKWI 74
           +   + +N RV+E  ++A  +
Sbjct: 260 ETAPTNYNLRVIEVTVAANAL 280

>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Length = 350

 Score = 51.1 bits (123), Expect = 6e-09
 Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 1/74 (1%)

Query: 1   MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEF 60
            +G   G +DQ        G    +  H L  E +  P     +V  +   +  A SSE+
Sbjct: 140 FVGVPCGILDQFAVVFGREGNVIFLDTHTLDYEYIPFPKDVSILVFYTGVRRELA-SSEY 198

Query: 61  NTRVVECRLSAKWI 74
             R      S K +
Sbjct: 199 AERKHIAEESLKIL 212

>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Length = 419

 Score = 47.4 bits (113), Expect = 1e-07
 Identities = 15/71 (21%), Positives = 27/71 (38%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFN 61
           +G   G +DQ          A  +  + L+ E V +  +   +V  +         S++N
Sbjct: 195 IGVNSGILDQFAIGFGEVKKAIELDCNTLKYEMVPVELRDYDIVIMNTNKPRALTESKYN 254

Query: 62  TRVVECRLSAK 72
            R  E R + K
Sbjct: 255 ERFAETREALK 265

>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Length = 399

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 2   LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLP-SQAVFVVAQSLATKNKAQSSEF 60
            G   G MDQ I+ +   G A  I    L +  V L   +   ++  S   ++   SSE+
Sbjct: 185 AGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNS-NVRHSLASSEY 243

Query: 61  NTRVVECRLSAK 72
             R  +C   A+
Sbjct: 244 PVRRRQCEEVAR 255

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	115
3v2u_C	520	Protein GAL3; rossmann fold, GHMP superfamily, tra	99.9
2a2c_A	478	N-acetylgalactosamine kinase; galactokinase, , tra	99.71
1pie_A	419	Galactokinase; galactose, galactosemia, transferas	99.53
1wuu_A	399	Galactokinase; galactosemia, GHMP superfamily, tra	99.46
2cz9_A	350	Probable galactokinase; structural genomics, NPPSF	99.41
3k85_A	357	D-glycero-D-manno-heptose 1-phosphate kinase; bact	98.48
2pg9_A	337	Phosphomevalonate kinase; GHMP kinase superfamily,	97.58
3k17_A	365	LIN0012 protein; protein structure initiative II(P	97.32
1kvk_A	395	MK, mevalonate kinase; RMK, ATP, GHMP, transferase	97.29
2hfs_A	332	Mevalonate kinase, putative; GHMP kinase, trypanos	96.11
3gon_A	335	Phosphomevalonate kinase; GHMP kinase superfamily,	95.97
2x7i_A	308	Mevalonate kinase; transferase; HET: CIT; 2.20A {S	95.91
2oi2_A	292	Mevalonate kinase; enzyme-inhibitor complex, trans	94.91
4hac_A	321	Mevalonate kinase; GHMP, ATP binding, phosphorylat	94.15
1kkh_A	317	Mevalonate kinase; mixed beta sheet, phosphate-bin	92.64
1h72_C	296	HK, homoserine kinase; transferase, threonine bios	86.1

>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A*

Probab=99.90  E-value=1.6e-24  Score=183.72  Aligned_cols=80  Identities=28%  Similarity=0.491  Sum_probs=75.7

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCC-CceeeeeCCC----CcEEEEEeCCc---cccccCCCchHHHHHHHHHHHH
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHP-LRSEDVVLPS----QAVFVVAQSLA---TKNKAQSSEFNTRVVECRLSAK   72 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~-l~~~~vplp~----~~~~vV~nS~v---~h~l~~~s~Yn~Rr~eCe~Aa~   72 (115)
                      |+|++||+|||++|++|++||+++|||+| +++++||+|+    ++.|+|+||++   +|.++ +++||+||+||++|++
T Consensus       200 ~vG~~~G~mDQ~as~~G~~g~~l~id~~~~l~~~~v~~p~~~~~~~~~vI~ns~v~~~k~~la-~s~YN~Rr~eCe~Aa~  278 (520)
T 3v2u_C          200 YVGVNNGGMDQATSVYGEEDHALYVEFRPKLKATPFKFPQLKNHEISFVIANTLVKSNKFETA-PTNYNLRVIEVTVAAN  278 (520)
T ss_dssp             GGTCCCCSHHHHHHHHCBTTBEEEEECSSSCEEEEECCCCCSSCEEEEEEEECCCCCCHHHHT-TTTHHHHHHHHHHHHH
T ss_pred             HhCCCCchhhHHHHHhCCCCeEEEEEcCCCceeEEeeCCCccCCCeEEEEEECCCcccccccc-cchhhHHHHHHHHHHH
Confidence            68999999999999999999999999999 9999999997    89999999999   77665 4999999999999999


Q ss_pred             HcchhcCCC
Q psy7886          73 WIPHLQTPQ   81 (115)
Q Consensus        73 ~Lgk~~g~~   81 (115)
                      +|++++|++
T Consensus       279 ~L~~~~g~~  287 (520)
T 3v2u_C          279 ALATRYSVA  287 (520)
T ss_dssp             HHHHHTTBC
T ss_pred             HHHHhhCCc
Confidence            999999876

>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A*

Probab=99.71  E-value=1.9e-17  Score=137.40  Aligned_cols=81  Identities=57%  Similarity=0.883  Sum_probs=75.1

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcchhcCC
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQTP   80 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk~~g~   80 (115)
                      |+|++||+|||+++++|++|+++++||++++++++|+|+++.|+|+||+++|++..+++||.||.||+.|+++|++..|+
T Consensus       201 ~~g~~~g~~D~~a~~~G~~g~~~~i~f~~~~~~~~~~~~~~~~vi~~s~~~~~t~~t~~yn~r~~e~~~A~~~L~~~~~~  280 (478)
T 2a2c_A          201 YIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKYKSL  280 (478)
T ss_dssp             GGTCCCCSHHHHHHHHCBTTBEEEEETTTTEEEEECCCTTEEEEEEECCCCCCGGGSSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hcCCCCccHHHHHHHhccCCcEEEEEcCCCceEEecCCCCcEEEEEeCCCcccccccchhHHHHHHHHHHHHHHHhhhcc
Confidence            47999999999999999999999999999999999999999999999999997655689999999999999999998765


Q ss_pred             C
Q psy7886          81 Q   81 (115)
Q Consensus        81 ~   81 (115)
                      +
T Consensus       281 ~  281 (478)
T 2a2c_A          281 Q  281 (478)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7

Probab=99.53  E-value=2.3e-14  Score=116.16  Aligned_cols=75  Identities=20%  Similarity=0.238  Sum_probs=69.9

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCC-CCcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcch
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLP-SQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPH   76 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp-~~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk   76 (115)
                      |+|.+||+|||+++++|..+.++++|+++..++++|+| +++.|+|++++++|+... ++||+||++|++|.++|++
T Consensus       194 ~~G~~~G~~D~~~~~~Gg~~~~~~~d~~~~~~~~l~~~~~~~~~vl~~~~~~~~t~~-~~y~~r~~~~~~a~~~l~~  269 (419)
T 1pie_A          194 YIGVNSGILDQFAIGFGEVKKAIELDCNTLKYEMVPVELRDYDIVIMNTNKPRALTE-SKYNERFAETREALKRMQT  269 (419)
T ss_dssp             TTCCCCCSHHHHHHHHCBTTEEEEEETTTCCEEEEECCCTTEEEEEEECCCCCCTTC-HHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCccchhHHHHHhccCCeEEEeecCCCceEEeecCCCCcEEEEEECCCcccccc-chHHHHHHHHHHHHHHHhh
Confidence            57999999999999999999999999999999999998 799999999999997654 8999999999999999975

>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7

Probab=99.46  E-value=1.1e-13  Score=111.34  Aligned_cols=76  Identities=25%  Similarity=0.316  Sum_probs=67.9

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCC-CCcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcchh
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLP-SQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHL   77 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp-~~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk~   77 (115)
                      |.|.+||+|||.++++|..++++++|+++.+++++|+| +++.|+|++++++|+... +.||.||++|+.|.++|++.
T Consensus       184 ~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~t~~-~~y~~r~~~~~~a~~~l~~~  260 (399)
T 1wuu_A          184 FAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNSNVRHSLAS-SEYPVRRRQCEEVARALGKE  260 (399)
T ss_dssp             HTCCCCCSHHHHHHHHCCTTEEEEEETTTCCEEEEECCCSSEEEEEEEEEEEC--CT-TTHHHHHHHHHHHHHHTTCS
T ss_pred             hcCCCCccHHHHHHHhccCCeEEEEecCCCceEEecCCCCCeEEEEEECCCcccccc-ccHHHHHHHHHHHHHHhChh
Confidence            46999999999999999999999999999999999998 499999999999997653 79999999999999999654

>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A*

Probab=99.41  E-value=5.8e-13  Score=104.03  Aligned_cols=74  Identities=22%  Similarity=0.257  Sum_probs=65.4

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcc
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIP   75 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lg   75 (115)
                      +.|++||+|||+++++|..|+++++|+++..++++|+|+++.|+|++++++|++.. ..|++||.+|++|++.++
T Consensus       140 ~~g~~~gi~d~~~~~~g~~~~~~~~d~~~~~~~~l~~~~~~~~vl~~~~~~~~~~t-~~~~~r~~~~~~a~~~~~  213 (350)
T 2cz9_A          140 FVGVPCGILDQFAVVFGREGNVIFLDTHTLDYEYIPFPKDVSILVFYTGVRRELAS-SEYAERKHIAEESLKILG  213 (350)
T ss_dssp             TTCCCCCSHHHHHHHHCCTTEEEEEETTTCCEEEEECCTTEEEEEEECSCC----C-HHHHHHHHHHHHHHHHHT
T ss_pred             hcCCCccchhHHHHHhcCCCeEEEEecCCCcEEEEcCCCCcEEEEEECCCCCcccc-chHHHHHHHHHHHHHHhC
Confidence            46999999999999999999999999999999999999999999999999986654 679999999999998875

>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron}

Probab=98.48  E-value=3e-08  Score=79.28  Aligned_cols=54  Identities=17%  Similarity=0.149  Sum_probs=44.0

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCC------cEEEEEeCCccccc
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQ------AVFVVAQSLATKNK   54 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~------~~~vV~nS~v~h~l   54 (115)
                      |+|.+||+|||+++++|...++.++|++++.++++|+|+.      +.++|++|+++|+.
T Consensus       151 ~~G~~~G~~D~~a~~~Gg~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~lvi~~t~~~~~a  210 (357)
T 3k85_A          151 DLGLSGGKQDQYAAAFGGFNYMEFLQNDLVIVNPLKMKRWIVDELESSMVLYFTGRSRSS  210 (357)
T ss_dssp             TTCCCCCSHHHHHHHHCSEEEEEEETTTEEEEEEECCCHHHHHHHHHTEEEECC------
T ss_pred             HccCCCcHHHHHHHHhCCceEEEEeCCCceeEEEEecChhhhhhcCceEEEEECCCcccH
Confidence            6799999999999999999999999999999999999863      67899999999854

>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua}

Probab=97.32  E-value=5.5e-05  Score=60.59  Aligned_cols=50  Identities=18%  Similarity=0.071  Sum_probs=39.2

Q ss_pred             cCccchHHHHHHHhcC------CCceEEeecC--------------CCceeeeeCCCCcEEEEEeCCccccc
Q psy7886           3 GTQGGGMDQAIAFLAS------PGCAKHIQFH--------------PLRSEDVVLPSQAVFVVAQSLATKNK   54 (115)
Q Consensus         3 G~~cGiMDQ~as~~gk------~g~allIDc~--------------~l~~~~vplp~~~~~vV~nS~v~h~l   54 (115)
                      | ++|+|||+++++|.      .+.+++.|++              .++++++|+|++ .++|++|+++|+.
T Consensus       157 g-~~~g~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~l~~l~~~~w~~~~~~~l~~~~~-~lll~~t~~~~sT  226 (365)
T 3k17_A          157 G-NGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVP-TFSVGWTGTPVST  226 (365)
T ss_dssp             S-SCCSHHHHHHHHCSEEEEECCCHHHHHHHHTTSCHHHHHHSCCTTCEEEEECCCSS-EEEEEECSCCCCH
T ss_pred             C-CCCcccHHHHhcCCEEEEecCCHHHhhhhcccchhhhhhccCCCCcceeeccCCcc-cEEEEECCCccch
Confidence            5 78999999999987      2334444443              578889999888 9999999999964

>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A

Probab=97.29  E-value=0.00022  Score=56.85  Aligned_cols=47  Identities=9%  Similarity=0.116  Sum_probs=39.1

Q ss_pred             CcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCccccc
Q psy7886           2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNK   54 (115)
Q Consensus         2 vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h~l   54 (115)
                      .|.+||+ ||.++++|   .++++  ++.+++++++|+++.|+|++++++|+.
T Consensus       197 ~G~~sG~-D~~~~~~G---g~~~~--~~~~~~~l~~~~~~~~vl~~~~~~~~T  243 (395)
T 1kvk_A          197 HGNPSGV-DNSVSTWG---GALRY--QQGKMSSLKRLPALQILLTNTKVPRST  243 (395)
T ss_dssp             HSSCCSH-HHHHHHHC---SEEEE--SSSCEEECSCCCCEEEEEEECCCCCCH
T ss_pred             ecCCCCc-chHHhhhc---ceEEE--cCCCceeccCCCCcEEEEEECCCCCch
Confidence            4899999 99999986   45554  566888888778999999999999865

>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A*

Probab=96.11  E-value=0.012  Score=45.25  Aligned_cols=50  Identities=14%  Similarity=0.098  Sum_probs=37.8

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCC--ceeeeeCCCCcEEEEEeCCccccc
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPL--RSEDVVLPSQAVFVVAQSLATKNK   54 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l--~~~~vplp~~~~~vV~nS~v~h~l   54 (115)
                      +.|.++|+ |+.++++|.   .++.+...-  .++++++|+++.++|++++++++.
T Consensus       150 ~~G~~~G~-D~~~~~~Gg---~~~~~~~~g~~~~~~~~~~~~~~~vl~~~~~~~~T  201 (332)
T 2hfs_A          150 YHGTPSGA-DNTAATYGG---LILYRRQNGKSVFKPIAFQQRLYLVVVGTGINAST  201 (332)
T ss_dssp             SSSCCCSH-HHHHHHHCE---EEEEEECSSSEEEEEECCCSCEEEEEEECSCCCCH
T ss_pred             hcCCCCcH-hHHHHhcCC---eEEEecCCCCcceeeecCCCCcEEEEEECCCCccH
Confidence            35889998 999999875   344443332  577788888999999999998854

>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A

Probab=95.97  E-value=0.0065  Score=46.17  Aligned_cols=52  Identities=13%  Similarity=0.021  Sum_probs=35.2

Q ss_pred             cCccchHHHHHHHhcCCCceEEeecC-------------------CCceeeeeCCCCcEEEEEeCCccccc
Q psy7886           3 GTQGGGMDQAIAFLASPGCAKHIQFH-------------------PLRSEDVVLPSQAVFVVAQSLATKNK   54 (115)
Q Consensus         3 G~~cGiMDQ~as~~gk~g~allIDc~-------------------~l~~~~vplp~~~~~vV~nS~v~h~l   54 (115)
                      +.++|+|||+++++|..-.....|+.                   ....+.++.|.++.+++++++.+++.
T Consensus       143 ~g~~sg~D~a~a~~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~t  213 (335)
T 3gon_A          143 GDNGSMGDLACIAAEDLVLYQSFDRQKVAAWLEEENLATVLERDWGFSISQVKPTLECDFLVGWTKEVAVS  213 (335)
T ss_dssp             TCCSCSHHHHHHHHTSCEEEECCCHHHHHHHHHHSCHHHHHHSCCCCEEEECCCCSCCEEEEEECCCCCCH
T ss_pred             cCCCCCCCcceeecCCeEEEEeCCccccceeecccchhheecccccceeEEcCCccccceEEeecCChhhH
Confidence            34466699999999874333322221                   24556666777899999999988743

>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus}

Probab=95.91  E-value=0.0051  Score=46.85  Aligned_cols=48  Identities=17%  Similarity=0.091  Sum_probs=35.8

Q ss_pred             CcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCccccc
Q psy7886           2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATKNK   54 (115)
Q Consensus         2 vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h~l   54 (115)
                      .|.+||+ |+.++..   |.++++| +...++++|+|.++.++|++++++++.
T Consensus       140 ~g~~sG~-d~~~~~~---g~~~~~~-~g~~~~~~~~~~~~~~vi~~~~~~~sT  187 (308)
T 2x7i_A          140 HGKPSGI-DTQTIVS---GKPVWFQ-KGHAETLKTLSLDGYMVVIDTGVKGST  187 (308)
T ss_dssp             HSSCCHH-HHHHHHH---TSCEEEE-TTEEEECSCCCBSSEEEEEECCC--CC
T ss_pred             CCCCchH-HHHHhhC---CceEEEE-cCCCceEeccCCCceEEEEECcCCCCH
Confidence            4788996 8777776   4577788 666777888777889999999987754

>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae}

Probab=94.91  E-value=0.04  Score=41.20  Aligned_cols=47  Identities=11%  Similarity=0.084  Sum_probs=34.5

Q ss_pred             CcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCC-CCcEEEEEeCCccccc
Q psy7886           2 LGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLP-SQAVFVVAQSLATKNK   54 (115)
Q Consensus         2 vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp-~~~~~vV~nS~v~h~l   54 (115)
                      .|+|||+ ||+++++|.   .+++ ++....+++|++ +.+ ++|++++++++.
T Consensus       128 ~~~p~g~-d~~~~~~gg---~~~~-~~~~~~~~~~~~~~~~-~~i~~~~~~~sT  175 (292)
T 2oi2_A          128 HMNPSGL-DAKTCLSDQ---PIRF-IKNVGFTELEMDLSAY-LVIADTGVYGHT  175 (292)
T ss_dssp             TCCCCSH-HHHHHTCSS---CEEE-ETTTEEEECCCCCSCE-EEEEECSSCCCH
T ss_pred             cCCCCch-hHHHHhcCc---eEEE-EcCCCceeecCCCCCE-EEEEECCCCCcH
Confidence            5889996 999999863   3444 555667777765 355 899999988754

>4hac_A Mevalonate kinase; GHMP, ATP binding, phosphorylation, transferase; 1.92A {Methanosarcina mazei}

Probab=94.15  E-value=0.032  Score=43.42  Aligned_cols=42  Identities=12%  Similarity=0.196  Sum_probs=31.6

Q ss_pred             cCccchHHHHHHHhcCCCceEEe-ecCCCceeeeeCCCCcEEEEEeCCccccc
Q psy7886           3 GTQGGGMDQAIAFLASPGCAKHI-QFHPLRSEDVVLPSQAVFVVAQSLATKNK   54 (115)
Q Consensus         3 G~~cGiMDQ~as~~gk~g~allI-Dc~~l~~~~vplp~~~~~vV~nS~v~h~l   54 (115)
                      |. +|++||+++++|.   ++++ |+.     .+++| ++.|+|++++++++.
T Consensus       152 g~-~~~~D~~~~~~Gg---~~~~~~~~-----~l~~p-~~~~vlv~p~~~~sT  194 (321)
T 4hac_A          152 GA-ASPTDTYVSTFGG---VVTIPERR-----KLKTP-DCGIVIGDTGVFSST  194 (321)
T ss_dssp             SC-CCSHHHHHHHHCS---EEEETTCC-----EECCC-CCEEEEEECCCCCCH
T ss_pred             CC-CcHHHHHHHHcCC---eEEEcCCc-----eeccC-CCEEEEEECCCCccH
Confidence            55 8899999999975   5555 333     33455 889999999999864

>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A

Probab=92.64  E-value=0.11  Score=39.42  Aligned_cols=46  Identities=11%  Similarity=0.047  Sum_probs=33.0

Q ss_pred             cCccchHHHHHHHhcCCCceEEeecCCCceeeeeCC--C----CcEEEEEeCCccccc
Q psy7886           3 GTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLP--S----QAVFVVAQSLATKNK   54 (115)
Q Consensus         3 G~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp--~----~~~~vV~nS~v~h~l   54 (115)
                      |.++ +|||.++++|  |.+++   ++.+.+++++|  +    ++.++|++++++++.
T Consensus       154 g~~s-g~D~~~~~~G--g~~~~---~~~~~~~~~~~~~~~l~~~~~~vl~~~~~~~~T  205 (317)
T 1kkh_A          154 GKAS-ITDTSTITYK--GILEI---KNNKFRKIKGEFEEFLKNCKFLIVYAEKRKKKT  205 (317)
T ss_dssp             SSCC-SHHHHHHHHC--SEEEE---SSSCEEEECHHHHHHHHTCCEEEEEEECCCSCH
T ss_pred             CCCc-hHHHHHHHhC--CeEEE---cCCCceEecCCcccccccCcEEEEEECCCcCcH
Confidence            5654 5999999998  55544   45667777754  1    257999999998854

>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} SCOP: d.14.1.5 d.58.26.1 PDB: 1fwl_A 1fwk_A* 1h73_A* 1h74_A*

Probab=86.10  E-value=0.9  Score=33.91  Aligned_cols=42  Identities=14%  Similarity=0.220  Sum_probs=32.7

Q ss_pred             HHHHH-HHhcCCCceEEeecCCCceeeeeCCCCcEEEEEeCCccc
Q psy7886           9 MDQAI-AFLASPGCAKHIQFHPLRSEDVVLPSQAVFVVAQSLATK   52 (115)
Q Consensus         9 MDQ~a-s~~gk~g~allIDc~~l~~~~vplp~~~~~vV~nS~v~h   52 (115)
                      +|+.+ +++|  |.++..++.+..++++++|+++.++|++++++.
T Consensus       135 ~ddv~~~~~g--g~~~~~~~~~~~~~~~~~~~~~~~vl~~p~~~~  177 (296)
T 1h72_C          135 ADNVAPAIFG--GFTMVTNYEPLEVLHIPIDFKLDILIAIPNISI  177 (296)
T ss_dssp             CTTHHHHHHC--SEEEEEETTTTEEEEECCCSCCCEEEECCSSCC
T ss_pred             ccchHHHHhC--CEEEEEeCCceEEEEEcCCCCeEEEEEeCCCCc
Confidence            56655 5766  567777777777899999888889999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	115
d1wuua1	215	d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapi	2e-07
d1s4ea1	176	d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococ	9e-05
d1piea1	205	d.14.1.5 (A:9-213) Galactokinase {Lactococcus lact	1e-04

>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 215

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 2e-07
 Identities = 12/38 (31%), Positives = 15/38 (39%)

Query: 1   MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLP 38
             G   G MDQ I+ +   G A  I    L +  V L 
Sbjct: 176 FAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLS 213

>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 37.5 bits (86), Expect = 9e-05
 Identities = 7/38 (18%), Positives = 12/38 (31%)

Query: 1   MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLP 38
            +G   G +DQ             +    L+ E +  P
Sbjct: 138 FVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFP 175

>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]} Length = 205

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Lactococcus lactis [TaxId: 1358]

 Score = 37.5 bits (86), Expect = 1e-04
 Identities = 8/35 (22%), Positives = 13/35 (37%)

Query: 1   MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDV 35
            +G   G +DQ          A  +  + L+ E V
Sbjct: 166 YIGVNSGILDQFAIGFGEVKKAIELDCNTLKYEMV 200

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	115
d1wuua1	215	Galactokinase {Human (Homo sapiens) [TaxId: 9606]}	99.26
d1s4ea1	176	Galactokinase {Archaeon Pyrococcus furiosus [TaxId	99.15
d1piea1	205	Galactokinase {Lactococcus lactis [TaxId: 1358]}	99.09
d1piea2	183	Galactokinase {Lactococcus lactis [TaxId: 1358]}	98.94
d1s4ea2	171	Galactokinase {Archaeon Pyrococcus furiosus [TaxId	98.83
d1wuua2	176	Galactokinase {Human (Homo sapiens) [TaxId: 9606]}	98.75

>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.4e-12  Score=94.90  Aligned_cols=39  Identities=31%  Similarity=0.370  Sum_probs=37.3

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCC
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPS   39 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~   39 (115)
                      |+|++||+|||+++++|++|++++|||++++++++|||.
T Consensus       176 ~~G~~~G~mDq~as~~g~~~~~~~id~~~~~~~~vp~~~  214 (215)
T d1wuua1         176 FAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSD  214 (215)
T ss_dssp             HTCCCCCSHHHHHHHHCCTTEEEEEETTTCCEEEEECCC
T ss_pred             hcCCCCcHHHHHHHHhCCCCeEEEEECCCCcEEeecCCC
Confidence            579999999999999999999999999999999999983

>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.15  E-value=1.3e-11  Score=87.19  Aligned_cols=39  Identities=18%  Similarity=0.289  Sum_probs=37.6

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCCC
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLPS   39 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp~   39 (115)
                      |+|++||+|||+++++|+.|+++++||++++++++|||+
T Consensus       138 ~~g~~~G~~Dq~~~~~gg~~~~~~~d~~~~~~~~i~~P~  176 (176)
T d1s4ea1         138 FVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPK  176 (176)
T ss_dssp             TSCCCCCSHHHHHHHHCCTTEEEEEETTTTEEEEEECCT
T ss_pred             hcCCCcchHHHHHHHhcCCCEEEEEeCCCCCEEecCCCC
Confidence            579999999999999999999999999999999999995

>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.09  E-value=3.2e-11  Score=87.86  Aligned_cols=38  Identities=21%  Similarity=0.210  Sum_probs=36.4

Q ss_pred             CCcCccchHHHHHHHhcCCCceEEeecCCCceeeeeCC
Q psy7886           1 MLGTQGGGMDQAIAFLASPGCAKHIQFHPLRSEDVVLP   38 (115)
Q Consensus         1 ~vG~~cGiMDQ~as~~gk~g~allIDc~~l~~~~vplp   38 (115)
                      |+|++||+|||+++++|+.|+++++||++++++++|+.
T Consensus       166 ~~g~~~G~~Dq~as~~g~~~~~~~~d~~~~~~~~ip~~  203 (205)
T d1piea1         166 YIGVNSGILDQFAIGFGEVKKAIELDCNTLKYEMVPVE  203 (205)
T ss_dssp             TTCCCCCSHHHHHHHHCBTTEEEEEETTTCCEEEEECC
T ss_pred             hcCCCCcHHHHHHHHhcCCCeEEEEECCCCcEEecCcc
Confidence            57999999999999999999999999999999999975

>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Galactokinase
domain: Galactokinase
species: Lactococcus lactis [TaxId: 1358]

Probab=98.94  E-value=2.8e-10  Score=83.45  Aligned_cols=41  Identities=20%  Similarity=0.213  Sum_probs=37.6

Q ss_pred             CcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcchhcCCC
Q psy7886          40 QAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQTPQ   81 (115)
Q Consensus        40 ~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk~~g~~   81 (115)
                      ++.|+|+||+++|++++ ++||+||.||++|++.+++.+|++
T Consensus         1 dy~lvi~dS~v~h~L~~-s~Yn~R~~ec~~a~~~v~~~~~~~   41 (183)
T d1piea2           1 DYDIVIMNTNKPRALTE-SKYNERFAETREALKRMQTRLDIQ   41 (183)
T ss_dssp             TEEEEEEECCCCCCTTC-HHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred             CeEEEEEeCCCCcCcCc-chhHHHHHHHHHHHHHHHHhcCcc
Confidence            58899999999998874 999999999999999998888876

>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Galactokinase
domain: Galactokinase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.83  E-value=3.8e-10  Score=81.90  Aligned_cols=39  Identities=18%  Similarity=0.124  Sum_probs=35.1

Q ss_pred             CcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcchhcC
Q psy7886          40 QAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQT   79 (115)
Q Consensus        40 ~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk~~g   79 (115)
                      +++|||+|||++|.++ +|+||+||+||++|+++|++.+.
T Consensus         1 d~~~vv~dsg~~h~L~-~s~Yn~R~~ec~~a~~~lg~~~l   39 (171)
T d1s4ea2           1 DVSVLVFYTGVKRELA-SSEYAERKRIAEESLRILGKESS   39 (171)
T ss_dssp             TEEEEEEEEEEECTTH-HHHHHHHHHHHHHHHHHHTCSCG
T ss_pred             CeEEEEEeCCCCcCCC-cchHHHHHHHHHHHHHHHhhhhh
Confidence            5789999999999887 49999999999999999998663

>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Galactokinase
domain: Galactokinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=3.9e-09  Score=76.41  Aligned_cols=41  Identities=17%  Similarity=0.233  Sum_probs=34.1

Q ss_pred             CcEEEEEeCCccccccCCCchHHHHHHHHHHHHHcchhcCCC
Q psy7886          40 QAVFVVAQSLATKNKAQSSEFNTRVVECRLSAKWIPHLQTPQ   81 (115)
Q Consensus        40 ~~~~vV~nS~v~h~l~~~s~Yn~Rr~eCe~Aa~~Lgk~~g~~   81 (115)
                      .++++|+||+++|++++ ++||+||.||++|++.|++.+--+
T Consensus         1 ~l~lvl~ds~v~r~l~~-~~Yn~R~~ec~~aa~~lg~~~l~~   41 (176)
T d1wuua2           1 KLAVLITNSNVRHSLAS-SEYPVRRRQCEEVARALGKESLRE   41 (176)
T ss_dssp             SEEEEEEEEEEEC--CT-TTHHHHHHHHHHHHHHTTCSSTTS
T ss_pred             CeEEEEEcCCCCcCcCc-cchHHHHHHHHHHHHHhCccchhh
Confidence            36799999999998875 899999999999999999876444