Psyllid ID: psy7944

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-
Protein Sequence
MRHVYNADLDDINAPEPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKKAVEDSGHQGDKVEENPPCTSSMYAFPEENGLWFPEKLTYLDKIGTVLKLRLQEYVSCCMPADLTFFSWLNFLLKI
Secondary Structure (PSIPRED)
cccccccccccccccccEEEEEEEEcccccEEEEEcHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEEEEEccccccccccEEEEEEcccccEEEEEEEEEEEEcccccccccccccccEEEEEccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccEEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccEEEcccccccccccccHHHHHHHHcccccccHHccHHHHHHHHHHHHHHHHHHcccccccHHHHHccccccccccccccEEEEEEEEEHHHccccccEEEEEEEEEccccEEEEEEEEEEEccccccccccccccccEEEEEcccccccHHHcEEEEcccccccccccccccccHHcccccccccccHHHHHHHHHcccEEEEEEEEEEEccccHHHEEEEHHHHHHcc
Coil and Loop (DISEMBL)
mrhvynadlddinapepyikedflqclnpkfsftnllpSRQRLEMMREMYHneaemsptspdyniesltggdpfydrfpwfrLVGRAFVYLsnlmypiplIQKVAIVNEKGDVKGHLKIAVQIVtdeestdltgtvkqsariifdddqqtgrnnkkavedsghqgdkveenppctssmyafpeenglwfpeklTYLDKIGTVLKLRLQEYVsccmpadltFFSWLNFLLKI
Flexible Loop (DISEMBL)
mrhvynadlddinapEPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQivtdeestdltgtvkqsariifdddqqtgrnnkkavedsghqgdkveenppcTSSMYAFPEENGLWFPEKLTYLDKIGTVLKLRLQEYVSCCMPADLTFFSWLNFLLKI
Low Complexity Region (SEG)
MRHVYNADLDDINAPEPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKKAVEDSGHQGDKVEENPPCTSSMYAFPEENGLWFPEKLTYLDKIGTVLKLRLQEYVSCCMPADLTFFSWLNFLLKI
Disordered region (IsUnstruct)
********LDDINAPEPYIKEDFLQCLNPKFSFTNLL***************************IESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTV****RII***********************************YAFPEENGLWFPEKLTYLDKIGTVLKLRLQEYVSCCMPADLTFFSWLNFLL**
Disordered Region (DISOPRED)
****************PYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSP**********TGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIV************************************************************************DKIGTVLKLRLQEYVSCCMPADLTFFSWLNFLLKI
Disordered Region (DISEMBL)
MRHVYNADLDDINAPEPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQT********************NPPCTSSMYAFPEENGLWFPEKLTYLDKIGTVLKLRLQEYVSCCMPADLTFFSWLNFLLKI
Disordered Region (DISPRO)
*RH*Y*ADLDDINAPEPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKKAVEDS************************GLWFPEKLTYLDKIGTVLKLRLQEYVSCCMPADLTFFSWLNFLLKI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRHVYNADLDDINAPEPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKKAVEDSGHQGDKVEENPPCTSSMYAFPEENGLWFPEKLTYLDKIGTVLKLRLQEYVSCCMPADLTFFSWLNFLLKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	231	2.2.26 [Sep-21-2011]
Q17BU3	1644	Kinesin-like protein unc-	N/A	N/A	0.484	0.068	0.758	2e-49
Q7PHR1	1644	Kinesin-like protein unc-	yes	N/A	0.675	0.094	0.560	2e-49
Q28WQ1	1671	Kinesin-like protein unc-	no	N/A	0.567	0.078	0.666	2e-49
A1ZAJ2	1670	Kinesin-like protein unc-	no	N/A	0.567	0.078	0.666	5e-49
P33173	1695	Kinesin-like protein KIF1	yes	N/A	0.796	0.108	0.404	1e-32
Q12756	1690	Kinesin-like protein KIF1	yes	N/A	0.471	0.064	0.598	4e-32
P23678	1584	Kinesin-like protein unc-	yes	N/A	0.454	0.066	0.571	2e-31
Q60575	1816	Kinesin-like protein KIF1	no	N/A	0.432	0.055	0.527	3e-23
O88658	1816	Kinesin-like protein KIF1	no	N/A	0.432	0.055	0.527	4e-23
O60333	1816	Kinesin-like protein KIF1	no	N/A	0.337	0.042	0.629	4e-23

>sp|Q17BU3|KIF1A_AEDAE Kinesin-like protein unc-104 OS=Aedes aegypti GN=unc-104 PE=3 SV=1

 Score =  196 bits (497), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 85/112 (75%), Positives = 102/112 (91%)

Query: 40  RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
           RQRLE+MREMYHNEAE+SPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+FVYLSNL+YP+P
Sbjct: 812 RQRLELMREMYHNEAELSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFVYLSNLLYPVP 871

Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTG 151
           L+ KVAIVNE+GDV+G+L++AVQ V DEE+ D    VKQSARI+FD++Q  G
Sbjct: 872 LVHKVAIVNERGDVRGYLRVAVQPVMDEENADFNNGVKQSARIVFDEEQNGG 923

Required for presynaptic maturation, has a role in axonal transport of dense-core vesicles carrying synaptic vesicle precursors, components required for the morphological transformation of axonal growth cones to mature boutons.
Aedes aegypti (taxid: 7159)

>sp|Q7PHR1|KIF1A_ANOGA Kinesin-like protein unc-104 OS=Anopheles gambiae GN=unc-104 PE=3 SV=3

 Score =  195 bits (496), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/166 (56%), Positives = 119/166 (71%), Gaps = 10/166 (6%)

Query: 15  PEPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPF 74
           P   +  +     N    + +L   RQRLE+MREMYHNEAE+SPTSPDYN+ESLTGGDPF
Sbjct: 785 PRTTVAVEVTDTKNGATHYWSLEKLRQRLELMREMYHNEAELSPTSPDYNVESLTGGDPF 844

Query: 75  YDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTG 134
           YDRFPWFR+VGR+FVYLSNL+YP+PL+ KVAIVNE+GDV+G+L++AVQ V DEE+ D + 
Sbjct: 845 YDRFPWFRMVGRSFVYLSNLLYPVPLVHKVAIVNERGDVRGYLRVAVQPVMDEENADFSN 904

Query: 135 TVKQSARIIFDDDQQTGR----------NNKKAVEDSGHQGDKVEE 170
            VKQSARI+FD++Q               ++K +E     G K+EE
Sbjct: 905 GVKQSARILFDEEQNGQHKVPKIRTIPDKDEKYIEGGNEMGTKLEE 950

Required for presynaptic maturation, has a role in axonal transport of dense-core vesicles carrying synaptic vesicle precursors, components required for the morphological transformation of axonal growth cones to mature boutons.

Anopheles gambiae (taxid: 7165)

>sp|Q28WQ1|KIF1A_DROPS Kinesin-like protein unc-104 OS=Drosophila pseudoobscura pseudoobscura GN=unc-104 PE=3 SV=1

 Score =  195 bits (495), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 92/138 (66%), Positives = 112/138 (81%), Gaps = 7/138 (5%)

Query: 40  RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
           RQRLE+MREMYHNEAEMSPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+F+YLSNL+YP+P
Sbjct: 809 RQRLELMREMYHNEAEMSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFIYLSNLLYPVP 868

Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGR----NNK 155
           L+ KVAIVNE+GDV+G+L+IAVQ V DEES D    VKQSAR++F++D    +    N K
Sbjct: 869 LVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNGVKQSARLVFNEDDAKPKYRALNEK 928

Query: 156 KAVE---DSGHQGDKVEE 170
             V+   D+G    K+EE
Sbjct: 929 DDVQRYIDNGGHDSKLEE 946

Required for presynaptic maturation, has a role in axonal transport of dense-core vesicles carrying synaptic vesicle precursors, components required for the morphological transformation of axonal growth cones to mature boutons.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|A1ZAJ2|KIF1A_DROME Kinesin-like protein unc-104 OS=Drosophila melanogaster GN=unc-104 PE=1 SV=1

 Score =  194 bits (492), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 92/138 (66%), Positives = 112/138 (81%), Gaps = 7/138 (5%)

Query: 40  RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
           RQRLE+MREMYHNEAEMSPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+F+YLSNL+YP+P
Sbjct: 809 RQRLELMREMYHNEAEMSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFIYLSNLLYPVP 868

Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGR----NNK 155
           L+ KVAIVNE+GDV+G+L+IAVQ V DEES D    VKQSAR++F++D    +    N K
Sbjct: 869 LVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNGVKQSARLVFNEDDAKPKYRALNEK 928

Query: 156 KAVE---DSGHQGDKVEE 170
             V+   D+G    K+EE
Sbjct: 929 DDVQRYIDNGGLDSKLEE 946

Required for presynaptic maturation, has a role in axonal transport of dense-core vesicles carrying synaptic vesicle precursors, components required for the morphological transformation of axonal growth cones to mature boutons.

Drosophila melanogaster (taxid: 7227)

>sp|P33173|KIF1A_MOUSE Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1a PE=1 SV=2

 Score =  139 bits (351), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/225 (40%), Positives = 124/225 (55%), Gaps = 41/225 (18%)

Query: 40   RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
            RQRL++MREMY   AE+  +  +     +TGGDPFYDRFPWFRLVGRAFVYLSNL+YP+P
Sbjct: 806  RQRLDLMREMYDRAAEVPSSVVEDCDNVVTGGDPFYDRFPWFRLVGRAFVYLSNLLYPVP 865

Query: 100  LIQKVAIVNEKGDVKGHLKIAVQIVT-DEESTDLTGTVKQS--ARIIFDDDQ-------- 148
            L+ +VAIV+EKG+VKG L++AVQ ++ DEE+ D    V+QS  A+I FDD          
Sbjct: 866  LVHRVAIVSEKGEVKGFLRVAVQAISADEEAPDYGSGVRQSGTAKISFDDQHFEKFQSES 925

Query: 149  ---------QTGRNNKKAVE------DSGHQGDKVEENPPCTSSMYAFPEENGLWFPEKL 193
                      T +   + VE      D+G   D+V  N  C+    A P E  +  PEK 
Sbjct: 926  CPVVGMSRSGTSQEELRIVEGQGQGADAGPSADEVNNN-TCS----AVPPEGLMDSPEKA 980

Query: 194  -------TYLD--KIGTVLKLRLQEYVSCCMPADLT-FFSWLNFL 228
                   T LD  ++G+    R+    +  + A+    F   NF+
Sbjct: 981  ALDGPLDTALDHLRLGSTFTFRVTVLQASSISAEYADIFCQFNFI 1025

Motor for anterograde axonal transport of synaptic vesicle precursors.

Mus musculus (taxid: 10090)

>sp|Q12756|KIF1A_HUMAN Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=1 SV=2

 Score =  138 bits (347), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 67/112 (59%), Positives = 86/112 (76%), Gaps = 3/112 (2%)

Query: 40  RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
           RQRL++MREMY   AE+  +  +     +TGGDPFYDRFPWFRLVGRAFVYLSNL+YP+P
Sbjct: 806 RQRLDLMREMYDRAAEVPSSVIEDCDNVVTGGDPFYDRFPWFRLVGRAFVYLSNLLYPVP 865

Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVT-DEESTDLTGTVKQS--ARIIFDDDQ 148
           L+ +VAIV+EKG+VKG L++AVQ ++ DEE+ D    V+QS  A+I FDD  
Sbjct: 866 LVHRVAIVSEKGEVKGFLRVAVQAISADEEAPDYGSGVRQSGTAKISFDDQH 917

Motor for anterograde axonal transport of synaptic vesicle precursors.

Homo sapiens (taxid: 9606)

>sp|P23678|UN104_CAEEL Kinesin-like protein unc-104 OS=Caenorhabditis elegans GN=unc-104 PE=2 SV=3

 Score =  135 bits (341), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 83/105 (79%)

Query: 40  RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
           +QRLE MR+MY  +AEMSP   D  +++L G DPFYDRFPWFR+VGRAFVYL+NL++ +P
Sbjct: 782 KQRLEAMRDMYETDAEMSPADGDPMMDALMGTDPFYDRFPWFRMVGRAFVYLNNLLHNVP 841

Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIF 144
           LI KVA+VNEKG+VKG+LK+A++ V  +E  +    V+Q+A++ F
Sbjct: 842 LIHKVAVVNEKGEVKGYLKVAIEPVQKDEVINQKKGVRQTAKLHF 886

Involved in microtubule-associated transport.

Caenorhabditis elegans (taxid: 6239)

>sp|Q60575|KIF1B_MOUSE Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1b PE=1 SV=2

 Score =  108 bits (270), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/108 (52%), Positives = 75/108 (69%), Gaps = 8/108 (7%)

Query: 48   EMYHNEAEMSPTSPDYNIESLT-----GGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQ 102
            E + +EA +  T  D   E  +     G DPFYDR PWF LVGRAFVYLSNL+YP+PLI 
Sbjct: 932  EDFDDEAFVDDTGSDAGTEEGSELFSDGHDPFYDRSPWFILVGRAFVYLSNLLYPVPLIH 991

Query: 103  KVAIVNEKGDVKGHLKIAVQ-IVTDEESTDLTGTVKQS--ARIIFDDD 147
            +VAIV+EKG+V+G L++AVQ I  DEE+ D    ++QS  A+I FD++
Sbjct: 992  RVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKISFDNE 1039

Motor for anterograde transport of mitochondria. Has a microtubule plus end-directed motility.

Mus musculus (taxid: 10090)

>sp|O88658|KIF1B_RAT Kinesin-like protein KIF1B OS=Rattus norvegicus GN=Kif1b PE=1 SV=2

 Score =  108 bits (269), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/108 (52%), Positives = 75/108 (69%), Gaps = 8/108 (7%)

Query: 48   EMYHNEAEMSPTSPDYNIESLT-----GGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQ 102
            E + +EA +  T  D   E  +     G DPFYDR PWF LVGRAFVYLSNL+YP+PLI 
Sbjct: 932  EDFDDEAFVDDTGSDAGTEEGSELFSDGHDPFYDRSPWFILVGRAFVYLSNLLYPVPLIH 991

Query: 103  KVAIVNEKGDVKGHLKIAVQ-IVTDEESTDLTGTVKQS--ARIIFDDD 147
            +VAIV+EKG+V+G L++AVQ I  DEE+ D    ++QS  A+I FD++
Sbjct: 992  RVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKISFDNE 1039

Isoform 1 mediates the transport of synaptic vesicles in neuronal cells.

Rattus norvegicus (taxid: 10116)

>sp|O60333|KIF1B_HUMAN Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5

 Score =  108 bits (269), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/81 (62%), Positives = 65/81 (80%), Gaps = 3/81 (3%)

Query: 70   GGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQ-IVTDEE 128
            G DPFYDR PWF LVGRAFVYLSNL+YP+PLI +VAIV+EKG+V+G L++AVQ I  DEE
Sbjct: 959  GHDPFYDRSPWFILVGRAFVYLSNLLYPVPLIHRVAIVSEKGEVRGFLRVAVQAIAADEE 1018

Query: 129  STDLTGTVKQS--ARIIFDDD 147
            + D    ++QS  A+I FD++
Sbjct: 1019 APDYGSGIRQSGTAKISFDNE 1039

Motor for anterograde transport of mitochondria. Has a microtubule plus end-directed motility. Isoform 2 is required for induction of neuronal apoptosis.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	231
332028320	1741	Kinesin-like protein unc-104 [Acromyrmex	0.662	0.087	0.693	2e-59
307189944	1743	Kinesin-like protein unc-104 [Camponotus	0.662	0.087	0.693	2e-59
307211427	1729	Kinesin-like protein unc-104 [Harpegnath	0.662	0.088	0.681	7e-59
328715398	1716	PREDICTED: kinesin-like protein unc-104-	0.731	0.098	0.558	4e-53
195124249	1778	GI18489 [Drosophila mojavensis] gi|19391	0.670	0.087	0.604	2e-51
195380495	1767	GJ21351 [Drosophila virilis] gi|19414380	0.670	0.087	0.604	2e-51
270012147	1676	hypothetical protein TcasGA2_TC006253 [T	0.623	0.085	0.653	3e-51
198461512	1766	GA21168 [Drosophila pseudoobscura pseudo	0.610	0.079	0.648	6e-51
195171633	1275	GL11811 [Drosophila persimilis] gi|19411	0.610	0.110	0.648	6e-51
161077164	1739	unc-104, isoform D [Drosophila melanogas	0.610	0.081	0.648	1e-50

>gi|332028320|gb|EGI68367.1| Kinesin-like protein unc-104 [Acromyrmex echinatior]

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/160 (69%), Positives = 130/160 (81%), Gaps = 7/160 (4%)

Query: 1   MRHVYNADLDDINAPEPYIKEDFLQCL----NPKFSFTNLLPSRQRLEMMREMYHNEAEM 56
           MRHVYN   +D +   P  KED  QCL    NPKFS  NLLPSRQRLE+MREMYHNEAE+
Sbjct: 814 MRHVYN---EDSSPSTPEAKEDIFQCLTVYSNPKFSLANLLPSRQRLELMREMYHNEAEL 870

Query: 57  SPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGH 116
           SPTSPD+NIES+TGGDPFYDRFPWFR+VGRAFVYLSNLMYP+PLI KVAIVNEKGDVKG+
Sbjct: 871 SPTSPDFNIESITGGDPFYDRFPWFRMVGRAFVYLSNLMYPVPLIHKVAIVNEKGDVKGY 930

Query: 117 LKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKK 156
           L++AVQ V +EE+++ +  V+QSARI F+DD   G  + K
Sbjct: 931 LRVAVQAVVEEENSEYSSGVRQSARISFEDDLFGGHKHNK 970

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189944|gb|EFN74180.1| Kinesin-like protein unc-104 [Camponotus floridanus]

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/160 (69%), Positives = 130/160 (81%), Gaps = 7/160 (4%)

Query: 1   MRHVYNADLDDINAPEPYIKEDFLQCL----NPKFSFTNLLPSRQRLEMMREMYHNEAEM 56
           MRHVYN   +D +   P  KED  QCL    NPKFS  NLLPSRQRLE+MREMYHNEAE+
Sbjct: 814 MRHVYN---EDSSPSTPEAKEDIFQCLTIYSNPKFSLANLLPSRQRLELMREMYHNEAEL 870

Query: 57  SPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGH 116
           SPTSPD+NIES+TGGDPFYDRFPWFR+VGRAFVYLSNLMYP+PLI KVAIVNEKGDVKG+
Sbjct: 871 SPTSPDFNIESITGGDPFYDRFPWFRMVGRAFVYLSNLMYPVPLIHKVAIVNEKGDVKGY 930

Query: 117 LKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKK 156
           L++AVQ V +EE+++ +  V+QSARI F+DD   G  + K
Sbjct: 931 LRVAVQAVVEEENSEYSSGVRQSARISFEDDLFGGHKHNK 970

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211427|gb|EFN87554.1| Kinesin-like protein unc-104 [Harpegnathos saltator]

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 109/160 (68%), Positives = 130/160 (81%), Gaps = 7/160 (4%)

Query: 1   MRHVYNADLDDINAPEPYIKEDFLQCL----NPKFSFTNLLPSRQRLEMMREMYHNEAEM 56
           MRHVYN   +D +   P  KED  QCL    NPKFS  NLLPSRQRLE+MREMYHNEAE+
Sbjct: 805 MRHVYN---EDSSPSTPEAKEDIFQCLTVYSNPKFSLANLLPSRQRLELMREMYHNEAEL 861

Query: 57  SPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGH 116
           SPTSPDYN+ES+ GGDPFYDRFPWFR+VGR+FVYLSNLMYP+PLI KVAIVNEKGDVKG+
Sbjct: 862 SPTSPDYNVESINGGDPFYDRFPWFRMVGRSFVYLSNLMYPVPLIHKVAIVNEKGDVKGY 921

Query: 117 LKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKK 156
           L++AVQ V +EE+++ +  V+QSARI F+DD   G+ + K
Sbjct: 922 LRVAVQAVVEEENSEYSSGVRQSARISFEDDLFGGQKHNK 961

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328715398|ref|XP_003245618.1| PREDICTED: kinesin-like protein unc-104-like [Acyrthosiphon pisum]

 Score =  213 bits (543), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 101/181 (55%), Positives = 136/181 (75%), Gaps = 12/181 (6%)

Query: 1   MRHVYNADLDDINAPEPYIKEDFLQCLN---PKFSFTNLLPSRQRLEMMREMYHNEAEMS 57
           MR +YN D++        +K+DF +CL    P  SF+ L+PSRQRLE+MREMY NEAE+S
Sbjct: 817 MRQIYNGDIESPQNSPCELKDDFFKCLTACTPNKSFSYLIPSRQRLELMREMYQNEAEIS 876

Query: 58  PTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHL 117
           PTSPD+NIE++TGGDPFYDRFPWFRL+GRAF+YLSNLMYP+PLI KV+IVNEKGDVKG+L
Sbjct: 877 PTSPDFNIEAITGGDPFYDRFPWFRLIGRAFIYLSNLMYPVPLIHKVSIVNEKGDVKGYL 936

Query: 118 KIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKKAVED---------SGHQGDKV 168
           ++A+Q V+++E++D +  V+Q A+I F+D    GR + K   D         S ++GD++
Sbjct: 937 RVAIQAVSEDETSDNSCGVRQFAKISFNDKDLLGRLSVKKNNDIIERIVTGKSSNKGDEI 996

Query: 169 E 169
           E
Sbjct: 997 E 997

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195124249|ref|XP_002006606.1| GI18489 [Drosophila mojavensis] gi|193911674|gb|EDW10541.1| GI18489 [Drosophila mojavensis]

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 98/162 (60%), Positives = 124/162 (76%), Gaps = 7/162 (4%)

Query: 16   EPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFY 75
            +P +K    Q    + +  NL+PSRQRLE+MREMYHNEAE+SPTSPDYN+ESLTGGDPFY
Sbjct: 893  QPELKPQLRQAYPTRLTLANLIPSRQRLELMREMYHNEAELSPTSPDYNVESLTGGDPFY 952

Query: 76   DRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGT 135
            DRFPWFR+VGR+F+YLSNL+YP+PL+ KVAIVNE+GDV+G+L+IAVQ V DEES D    
Sbjct: 953  DRFPWFRMVGRSFIYLSNLLYPVPLVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNG 1012

Query: 136  VKQSARIIFDDDQQTGR----NNKKAVE---DSGHQGDKVEE 170
            VKQSAR++F++D    +    N K  V+   D+G    K+EE
Sbjct: 1013 VKQSARLVFNEDDAKPKYRALNEKDDVQRYIDNGGLDSKLEE 1054

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195380495|ref|XP_002049006.1| GJ21351 [Drosophila virilis] gi|194143803|gb|EDW60199.1| GJ21351 [Drosophila virilis]

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 98/162 (60%), Positives = 124/162 (76%), Gaps = 7/162 (4%)

Query: 16   EPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFY 75
            +P +K    Q    + +  NL+PSRQRLE+MREMYHNEAE+SPTSPDYN+ESLTGGDPFY
Sbjct: 882  QPELKPQLRQAYPTRLTLANLIPSRQRLELMREMYHNEAELSPTSPDYNVESLTGGDPFY 941

Query: 76   DRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGT 135
            DRFPWFR+VGR+F+YLSNL+YP+PL+ KVAIVNE+GDV+G+L+IAVQ V DEES D    
Sbjct: 942  DRFPWFRMVGRSFIYLSNLLYPVPLVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNG 1001

Query: 136  VKQSARIIFDDDQQTGR----NNKKAVE---DSGHQGDKVEE 170
            VKQSAR++F++D    +    N K  V+   D+G    K+EE
Sbjct: 1002 VKQSARLVFNEDDAKPKYRALNEKDDVQRYIDNGGLDSKLEE 1043

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270012147|gb|EFA08595.1| hypothetical protein TcasGA2_TC006253 [Tribolium castaneum]

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 100/153 (65%), Positives = 124/153 (81%), Gaps = 9/153 (5%)

Query: 1   MRHVYNADLDDINAPEPYIKED--FLQCLN------PKFSFTNLLPSRQRLEMMREMYHN 52
           MR VYN ++ ++ +PE  I+     L+CL        +FS T+LLPSRQRLE+MREMYHN
Sbjct: 794 MRLVYNEEVVELPSPEVGIETTTPLLRCLTQCPPSPSRFSLTSLLPSRQRLELMREMYHN 853

Query: 53  EAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGD 112
           EAEMSPTSPDYN+ESLTGGDPFYDRFPWFR+VGR FVYLSNL+YP+ LI KVAIV+EKGD
Sbjct: 854 EAEMSPTSPDYNVESLTGGDPFYDRFPWFRMVGRGFVYLSNLLYPVTLIHKVAIVSEKGD 913

Query: 113 VKGHLKIAVQIVTDEESTDLTGTVKQSARIIFD 145
           V+G+L++AVQ V DE+++D  G V+QSARI F+
Sbjct: 914 VRGYLRVAVQAVMDEDNSDQVG-VRQSARIAFE 945

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198461512|ref|XP_001362036.2| GA21168 [Drosophila pseudoobscura pseudoobscura] gi|198137364|gb|EAL26616.2| GA21168 [Drosophila pseudoobscura pseudoobscura]

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 96/148 (64%), Positives = 119/148 (80%), Gaps = 7/148 (4%)

Query: 30   KFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFV 89
            + +  NL+PSRQRLE+MREMYHNEAEMSPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+F+
Sbjct: 894  RLTLANLIPSRQRLELMREMYHNEAEMSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFI 953

Query: 90   YLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQ 149
            YLSNL+YP+PL+ KVAIVNE+GDV+G+L+IAVQ V DEES D    VKQSAR++F++D  
Sbjct: 954  YLSNLLYPVPLVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNGVKQSARLVFNEDDA 1013

Query: 150  TGR----NNKKAVE---DSGHQGDKVEE 170
              +    N K  V+   D+G    K+EE
Sbjct: 1014 KPKYRALNEKDDVQRYIDNGGHDSKLEE 1041

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195171633|ref|XP_002026608.1| GL11811 [Drosophila persimilis] gi|194111534|gb|EDW33577.1| GL11811 [Drosophila persimilis]

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 96/148 (64%), Positives = 119/148 (80%), Gaps = 7/148 (4%)

Query: 30   KFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFV 89
            + +  NL+PSRQRLE+MREMYHNEAEMSPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+F+
Sbjct: 894  RLTLANLIPSRQRLELMREMYHNEAEMSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFI 953

Query: 90   YLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQ 149
            YLSNL+YP+PL+ KVAIVNE+GDV+G+L+IAVQ V DEES D    VKQSAR++F++D  
Sbjct: 954  YLSNLLYPVPLVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNGVKQSARLVFNEDDA 1013

Query: 150  TGR----NNKKAVE---DSGHQGDKVEE 170
              +    N K  V+   D+G    K+EE
Sbjct: 1014 KPKYRALNEKDDVQRYIDNGGHDSKLEE 1041

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161077164|ref|NP_611155.3| unc-104, isoform D [Drosophila melanogaster] gi|157400369|gb|AAM70884.2| unc-104, isoform D [Drosophila melanogaster]

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 96/148 (64%), Positives = 119/148 (80%), Gaps = 7/148 (4%)

Query: 30   KFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFV 89
            + +  NL+PSRQRLE+MREMYHNEAEMSPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+F+
Sbjct: 868  RLTLANLIPSRQRLELMREMYHNEAEMSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFI 927

Query: 90   YLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQ 149
            YLSNL+YP+PL+ KVAIVNE+GDV+G+L+IAVQ V DEES D    VKQSAR++F++D  
Sbjct: 928  YLSNLLYPVPLVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNGVKQSARLVFNEDDA 987

Query: 150  TGR----NNKKAVE---DSGHQGDKVEE 170
              +    N K  V+   D+G    K+EE
Sbjct: 988  KPKYRALNEKDDVQRYIDNGGLDSKLEE 1015

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	231
UNIPROTKB|Q17BU3	1644	unc-104 "Kinesin-like protein	0.506	0.071	0.735	3.1e-45
UNIPROTKB|Q28WQ1	1671	unc-104 "Kinesin-like protein	0.696	0.096	0.567	5.5e-45
FB|FBgn0034155	1670	unc-104 "unc-104 ortholog" [Dr	0.567	0.078	0.666	1.5e-44
UNIPROTKB|Q7PHR1	1644	unc-104 "Kinesin-like protein	0.670	0.094	0.562	1.8e-44
UNIPROTKB|F1NXK6	1657	KIF1A "Uncharacterized protein	0.458	0.063	0.621	1.2e-29
UNIPROTKB|Q12756	1690	KIF1A "Kinesin-like protein KI	0.458	0.062	0.621	1.2e-29
MGI|MGI:108391	1695	Kif1a "kinesin family member 1	0.458	0.062	0.621	1.2e-29
UNIPROTKB|H9GWG2	1690	KIF1A "Uncharacterized protein	0.458	0.062	0.621	1.6e-29
WB|WBGene00006831	1584	unc-104 [Caenorhabditis elegan	0.562	0.082	0.485	1e-28
UNIPROTKB|J9NUM7	1347	KIF1B "Uncharacterized protein	0.818	0.140	0.402	2.7e-28

UNIPROTKB|Q17BU3 unc-104 "Kinesin-like protein unc-104" [Aedes aegypti (taxid:7159)]

 Score = 483 (175.1 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
 Identities = 86/117 (73%), Positives = 103/117 (88%)

Query:    40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
             RQRLE+MREMYHNEAE+SPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+FVYLSNL+YP+P
Sbjct:   812 RQRLELMREMYHNEAELSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFVYLSNLLYPVP 871

Query:   100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKK 156
             L+ KVAIVNE+GDV+G+L++AVQ V DEE+ D    VKQSARI+FD++Q  G    K
Sbjct:   872 LVHKVAIVNERGDVRGYLRVAVQPVMDEENADFNNGVKQSARIVFDEEQNGGHKIPK 928

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0047496 "vesicle transport along microtubule" evidence=ISS

GO:0048489 "synaptic vesicle transport" evidence=ISS

UNIPROTKB|Q28WQ1 unc-104 "Kinesin-like protein unc-104" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 487 (176.5 bits), Expect = 5.5e-45, P = 5.5e-45
 Identities = 97/171 (56%), Positives = 123/171 (71%)

Query:    10 DDINAP---EPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIE 66
             D+  AP   +  +  +     N    + +L   RQRLE+MREMYHNEAEMSPTSPDYN+E
Sbjct:   776 DEFGAPPVSKTLVAVEVTDTKNGATHYWSLEKLRQRLELMREMYHNEAEMSPTSPDYNVE 835

Query:    67 SLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTD 126
             SLTGGDPFYDRFPWFR+VGR+F+YLSNL+YP+PL+ KVAIVNE+GDV+G+L+IAVQ V D
Sbjct:   836 SLTGGDPFYDRFPWFRMVGRSFIYLSNLLYPVPLVHKVAIVNERGDVRGYLRIAVQPVLD 895

Query:   127 EESTDLTGTVKQSARIIFDDDQQTGR----NNKKAVE---DSGHQGDKVEE 170
             EES D    VKQSAR++F++D    +    N K  V+   D+G    K+EE
Sbjct:   896 EESIDFNNGVKQSARLVFNEDDAKPKYRALNEKDDVQRYIDNGGHDSKLEE 946

GO:0003674 "molecular_function" evidence=ND

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0047496 "vesicle transport along microtubule" evidence=ISS

GO:0048489 "synaptic vesicle transport" evidence=ISS

FB|FBgn0034155 unc-104 "unc-104 ortholog" [Drosophila melanogaster (taxid:7227)]

 Score = 483 (175.1 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 92/138 (66%), Positives = 112/138 (81%)

Query:    40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
             RQRLE+MREMYHNEAEMSPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+F+YLSNL+YP+P
Sbjct:   809 RQRLELMREMYHNEAEMSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFIYLSNLLYPVP 868

Query:   100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGR----NNK 155
             L+ KVAIVNE+GDV+G+L+IAVQ V DEES D    VKQSAR++F++D    +    N K
Sbjct:   869 LVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNGVKQSARLVFNEDDAKPKYRALNEK 928

Query:   156 KAVE---DSGHQGDKVEE 170
               V+   D+G    K+EE
Sbjct:   929 DDVQRYIDNGGLDSKLEE 946

GO:0003777 "microtubule motor activity" evidence=ISS

GO:0005871 "kinesin complex" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IMP

GO:0048489 "synaptic vesicle transport" evidence=IMP

GO:0016188 "synaptic vesicle maturation" evidence=IMP

GO:0047496 "vesicle transport along microtubule" evidence=IMP

GO:0016192 "vesicle-mediated transport" evidence=IMP

GO:0007528 "neuromuscular junction development" evidence=IMP

GO:0008345 "larval locomotory behavior" evidence=IMP

GO:0048490 "anterograde synaptic vesicle transport" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

UNIPROTKB|Q7PHR1 unc-104 "Kinesin-like protein unc-104" [Anopheles gambiae (taxid:7165)]

 Score = 482 (174.7 bits), Expect = 1.8e-44, P = 1.8e-44
 Identities = 94/167 (56%), Positives = 122/167 (73%)

Query:    15 PEPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPF 74
             P   +  +     N    + +L   RQRLE+MREMYHNEAE+SPTSPDYN+ESLTGGDPF
Sbjct:   785 PRTTVAVEVTDTKNGATHYWSLEKLRQRLELMREMYHNEAELSPTSPDYNVESLTGGDPF 844

Query:    75 YDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTG 134
             YDRFPWFR+VGR+FVYLSNL+YP+PL+ KVAIVNE+GDV+G+L++AVQ V DEE+ D + 
Sbjct:   845 YDRFPWFRMVGRSFVYLSNLLYPVPLVHKVAIVNERGDVRGYLRVAVQPVMDEENADFSN 904

Query:   135 TVKQSARIIFDDDQQTGRN-----------NKKAVEDSGHQGDKVEE 170
              VKQSARI+FD++Q  G++           ++K +E     G K+EE
Sbjct:   905 GVKQSARILFDEEQN-GQHKVPKIRTIPDKDEKYIEGGNEMGTKLEE 950

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0047496 "vesicle transport along microtubule" evidence=ISS

GO:0048489 "synaptic vesicle transport" evidence=ISS

UNIPROTKB|F1NXK6 KIF1A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 343 (125.8 bits), Expect = 1.2e-29, P = 1.2e-29
 Identities = 69/111 (62%), Positives = 90/111 (81%)

Query:    40 RQRLEMMREMYHNEAEMSPTSPDYNIESL-TGGDPFYDRFPWFRLVGRAFVYLSNLMYPI 98
             RQRL++MREMY   AE+ P+S   + +++ TGGDPFYDRFPWFRLVGRAFVYLSNL+YP+
Sbjct:   770 RQRLDLMREMYDRAAEV-PSSVIEDCDNVVTGGDPFYDRFPWFRLVGRAFVYLSNLLYPV 828

Query:    99 PLIQKVAIVNEKGDVKGHLKIAVQIVT-DEESTDLTGTVKQS--ARIIFDD 146
             PL+ +VAIV+EKG+VKG L++AVQ ++ DEE+ D    V+QS  A+I FDD
Sbjct:   829 PLVHRVAIVSEKGEVKGFLRVAVQAISADEEAPDYGSGVRQSGTAKISFDD 879

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q12756 KIF1A "Kinesin-like protein KIF1A" [Homo sapiens (taxid:9606)]

 Score = 343 (125.8 bits), Expect = 1.2e-29, P = 1.2e-29
 Identities = 69/111 (62%), Positives = 90/111 (81%)

Query:    40 RQRLEMMREMYHNEAEMSPTSPDYNIESL-TGGDPFYDRFPWFRLVGRAFVYLSNLMYPI 98
             RQRL++MREMY   AE+ P+S   + +++ TGGDPFYDRFPWFRLVGRAFVYLSNL+YP+
Sbjct:   806 RQRLDLMREMYDRAAEV-PSSVIEDCDNVVTGGDPFYDRFPWFRLVGRAFVYLSNLLYPV 864

Query:    99 PLIQKVAIVNEKGDVKGHLKIAVQIVT-DEESTDLTGTVKQS--ARIIFDD 146
             PL+ +VAIV+EKG+VKG L++AVQ ++ DEE+ D    V+QS  A+I FDD
Sbjct:   865 PLVHRVAIVSEKGEVKGFLRVAVQAISADEEAPDYGSGVRQSGTAKISFDD 915

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0008219 "cell death" evidence=IEA

GO:0003774 "motor activity" evidence=TAS

GO:0008089 "anterograde axon cargo transport" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

MGI|MGI:108391 Kif1a "kinesin family member 1A" [Mus musculus (taxid:10090)]

 Score = 343 (125.8 bits), Expect = 1.2e-29, P = 1.2e-29
 Identities = 69/111 (62%), Positives = 90/111 (81%)

Query:    40 RQRLEMMREMYHNEAEMSPTSPDYNIESL-TGGDPFYDRFPWFRLVGRAFVYLSNLMYPI 98
             RQRL++MREMY   AE+ P+S   + +++ TGGDPFYDRFPWFRLVGRAFVYLSNL+YP+
Sbjct:   806 RQRLDLMREMYDRAAEV-PSSVVEDCDNVVTGGDPFYDRFPWFRLVGRAFVYLSNLLYPV 864

Query:    99 PLIQKVAIVNEKGDVKGHLKIAVQIVT-DEESTDLTGTVKQS--ARIIFDD 146
             PL+ +VAIV+EKG+VKG L++AVQ ++ DEE+ D    V+QS  A+I FDD
Sbjct:   865 PLVHRVAIVSEKGEVKGFLRVAVQAISADEEAPDYGSGVRQSGTAKISFDD 915

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0008017 "microtubule binding" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

UNIPROTKB|H9GWG2 KIF1A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 342 (125.4 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 69/111 (62%), Positives = 89/111 (80%)

Query:    40 RQRLEMMREMYHNEAEMSPTSPDYNIESL-TGGDPFYDRFPWFRLVGRAFVYLSNLMYPI 98
             RQRL++MREMY   AE+ P+S   + +++ TGGDPFYDRFPWFRLVGRAFVYLSNL+YP+
Sbjct:   806 RQRLDLMREMYDRAAEV-PSSVIEDCDNVVTGGDPFYDRFPWFRLVGRAFVYLSNLLYPV 864

Query:    99 PLIQKVAIVNEKGDVKGHLKIAVQIVT-DEESTDLTGTVKQS--ARIIFDD 146
             PL+ +VA+V+EKG+VKG L++AVQ  + DEE+ D    V+QS  ARI FDD
Sbjct:   865 PLVHRVAVVSEKGEVKGFLRVAVQATSADEEAPDYGSGVRQSGTARISFDD 915

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

WB|WBGene00006831 unc-104 [Caenorhabditis elegans (taxid:6239)]

 Score = 334 (122.6 bits), Expect = 1.0e-28, P = 1.0e-28
 Identities = 66/136 (48%), Positives = 98/136 (72%)

Query:    40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
             +QRLE MR+MY  +AEMSP   D  +++L G DPFYDRFPWFR+VGRAFVYL+NL++ +P
Sbjct:   782 KQRLEAMRDMYETDAEMSPADGDPMMDALMGTDPFYDRFPWFRMVGRAFVYLNNLLHNVP 841

Query:   100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIF--DDDQQTGRNNKKA 157
             LI KVA+VNEKG+VKG+LK+A++ V  +E  +    V+Q+A++ F  +D  ++ +N + +
Sbjct:   842 LIHKVAVVNEKGEVKGYLKVAIEPVQKDEVINQKKGVRQTAKLHFRKEDFLKSHKNGETS 901

Query:   158 VEDS----GHQGDKVE 169
               D+     H  ++VE
Sbjct:   902 DSDALAFPEHMQEEVE 917

GO:0007018 "microtubule-based movement" evidence=IEA;IDA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0040011 "locomotion" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0008089 "anterograde axon cargo transport" evidence=IMP

GO:0043113 "receptor clustering" evidence=IMP

GO:0045887 "positive regulation of synaptic growth at neuromuscular junction" evidence=IMP

GO:0016192 "vesicle-mediated transport" evidence=IMP

GO:0007631 "feeding behavior" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0030421 "defecation" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0006942 "regulation of striated muscle contraction" evidence=IMP

GO:0007270 "neuron-neuron synaptic transmission" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0045055 "regulated secretory pathway" evidence=IMP

GO:0030516 "regulation of axon extension" evidence=IMP

GO:0030424 "axon" evidence=IDA

GO:0030425 "dendrite" evidence=IDA

GO:0008574 "plus-end-directed microtubule motor activity" evidence=IDA

GO:0007271 "synaptic transmission, cholinergic" evidence=IMP

GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=IDA

GO:0070273 "phosphatidylinositol-4-phosphate binding" evidence=IDA

GO:0045202 "synapse" evidence=IDA

GO:0048156 "tau protein binding" evidence=IPI

GO:0008017 "microtubule binding" evidence=IDA

GO:0010940 "positive regulation of necrotic cell death" evidence=IGI

UNIPROTKB|J9NUM7 KIF1B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 329 (120.9 bits), Expect = 2.7e-28, P = 2.7e-28
 Identities = 81/201 (40%), Positives = 119/201 (59%)

Query:    10 DDINAPEPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLT 69
             +D   P   +  +     N    + +L   +QRL++MREMY    EM+  + D    ++T
Sbjct:   430 EDKPFPRTVVAVEVQDLKNGATHYWSLEKLKQRLDLMREMYDRAGEMASGAQDDGEATVT 489

Query:    70 GGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQ-IVTDEE 128
             G DPFYDRF WF+LVGRAFVYLSNL+YP+PLI +VAIV+EKG+V+G L++AVQ I  DEE
Sbjct:   490 GSDPFYDRFHWFKLVGRAFVYLSNLLYPVPLIHRVAIVSEKGEVRGFLRVAVQAIAADEE 549

Query:   129 STDLTGTVKQS--ARIIFDDDQQTGRN-NKKAVEDSGHQGD--KVEENPPCTSSMYAFPE 183
             + D    ++QS  A+I FD++     + +  A+  SG   +  ++ E    +S +   PE
Sbjct:   550 APDYGSGIRQSGTAKISFDNEYFNQNDFSSVAMTRSGLSLEELRIVEGQGQSSEVITPPE 609

Query:   184 ENGLWFPEKLTYLD-KIGTVL 203
             E       ++  LD K GT+L
Sbjct:   610 EIN-----RMNDLDLKSGTLL 625

GO:0005543 "phospholipid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7PHR1	KIF1A_ANOGA	No assigned EC number	0.5602	0.6753	0.0948	yes	N/A
Q12756	KIF1A_HUMAN	No assigned EC number	0.5982	0.4718	0.0644	yes	N/A
P23678	UN104_CAEEL	No assigned EC number	0.5714	0.4545	0.0662	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	231
pfam12423	42	pfam12423, KIF1B, Kinesin protein 1B	2e-08

>gnl|CDD|221571 pfam12423, KIF1B, Kinesin protein 1B

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 6/47 (12%)

Query: 40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGR 86
            RL +MREMY N  E          +     DPFY+      L+G 
Sbjct: 2  ENRLFLMREMYQNYDE------PEYSQHFKEEDPFYEPPENHSLIGV 42

This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00225, pfam00498. KIF1B is an anterograde motor for transport of mitochondria in axons of neuronal cells. Length = 42

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	231
KOG0241|consensus	1714		99.9
PF12423	45	KIF1B: Kinesin protein 1B; InterPro: IPR022140 Thi	99.37
KOG0245|consensus	1221		99.34
cd04042	121	C2A_MCTP_PRT C2 domain first repeat found in Multi	91.87
PF09308	238	LuxQ-periplasm: LuxQ, periplasmic; InterPro: IPR01	83.83
cd04044	124	C2A_Tricalbin-like C2 domain first repeat present	83.41
PF11618	107	DUF3250: Protein of unknown function (DUF3250); In	81.03
cd08678	126	C2_C21orf25-like C2 domain found in the Human chro	80.16

>KOG0241|consensus

Probab=99.90  E-value=8.5e-25  Score=221.60  Aligned_cols=148  Identities=21%  Similarity=0.278  Sum_probs=114.7

Q ss_pred             cccccccccCcCcccchHHHHHHhhhhcccCCCCCCCccCCCCCCCCCCCCCCCceeEEeeeeeeccccccccccceeEE
Q psy7944          26 CLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVA  105 (231)
Q Consensus        26 ~~s~lWSleKL~~~~nRL~~MREMYq~~~e~~~~~~d~~~~~~~~~DPFYD~~p~fsLIGrA~VyLsnLly~V~L~~~Vp  105 (231)
                      .++++|+++||   ++||.+||+|||+|.++-..   .........|||||.+++|+|||+|+|||++|||+|.|+|+||
T Consensus       721 ~gsQiWt~ekL---enkLiDMRd~Yqe~ke~~~~---~~~~~~k~~DPFyesQEnhnLiGVANvFLE~LF~DvkL~Y~vP  794 (1714)
T KOG0241|consen  721 KGSQIWTIEKL---ENKLIDMRDLYQEWKEKVPP---AKRLYGKRGDPFYESQENHNLIGVANVFLEVLFHDVKLQYAVP  794 (1714)
T ss_pred             CCceeeeHHHh---HhHHhhHHHHHHHHHhcCCc---hhhhccccCCccccccccccchhhHHHHHHHHHhhheeccccc
Confidence            35899999999   99999999999999976542   2345677899999999999999999999999999999999999


Q ss_pred             EEcCCCCeeEEEEEEEEEecCCCcccccccccccccccccccccccccCcceee---cCCCCCCCcccCCCc-eeeeecc
Q psy7944         106 IVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKKAVE---DSGHQGDKVEENPPC-TSSMYAF  181 (231)
Q Consensus       106 IVsekGEVkG~LrVeVqpisd~e~~d~~~gv~qSakisfd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~  181 (231)
                      ||||+|||+|+|||+|.++++.++.+..+| ..-+..+  .+....+|-.+|-.   ..-|.--.    --+ +|-+|.|
T Consensus       795 IIsQqGEVAGRLhVev~Rv~gq~~~~~~gg-dev~e~~--~~~~~~~~~ltCrVkIk~AtGLP~~----LSnFVFCqYtF  867 (1714)
T KOG0241|consen  795 IISQQGEVAGRLHVEVMRVTGQVPERVVGG-DEVVESS--GEIIHRVKKLTCRVKIKEATGLPLN----LSNFVFCQYTF  867 (1714)
T ss_pred             eecccccccceeEEEEEEeccccchhhccc-cccccCC--CccccccceEEEEEEEeeccCCccc----ccceEEEEeee
Confidence            999999999999999999999987765543 3324333  33333455555544   44444333    233 7777887


Q ss_pred             cCCCC
Q psy7944         182 PEENG  186 (231)
Q Consensus       182 ~~~~~  186 (231)
                      =++.-
T Consensus       868 w~~~E  872 (1714)
T KOG0241|consen  868 WDQQE  872 (1714)
T ss_pred             ccccc
Confidence            66543

>PF12423 KIF1B: Kinesin protein 1B; InterPro: IPR022140 This domain family is found in eukaryotes, and is approximately 50 amino acids in length

Probab=99.37  E-value=3.3e-13  Score=92.37  Aligned_cols=44  Identities=32%  Similarity=0.398  Sum_probs=34.3

Q ss_pred             cchHHHHHHhhhhcccCCCCCCCccCCCCCCCCCCCCCCCceeEEee
Q psy7944          40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGR   86 (231)
Q Consensus        40 ~nRL~~MREMYq~~~e~~~~~~d~~~~~~~~~DPFYD~~p~fsLIGr   86 (231)
                      +|||++||||||++.+...   +.....+.+.|||||++|||+|||+
T Consensus         2 ~nRl~~MRemYq~~~~~~~---~~~~~~~~~~DPF~e~~e~~~lIGv   45 (45)
T PF12423_consen    2 ENRLFDMREMYQQYKENDF---PEYDQHFKEDDPFYEPQENHSLIGV   45 (45)
T ss_pred             ccHHHHHHHHHHHHHhcCC---ccccccCCCCCCCCCCCccccccCc
Confidence            7999999999999842111   1112367889999999999999996

The family is found in association with PF00225 from PFAM, PF00498 from PFAM. KIF1B is an anterograde motor for transport of mitochondria in axons of neuronal cells.

>KOG0245|consensus

Probab=99.34  E-value=7.9e-14  Score=143.36  Aligned_cols=97  Identities=46%  Similarity=0.741  Sum_probs=88.6

Q ss_pred             ccccccccCcCcccchHHHHHHhhhhcccCCCCCCCccCCCCCCCCCCCCCCCceeEEeeeeeeccccccccccceeEEE
Q psy7944          27 LNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAI  106 (231)
Q Consensus        27 ~s~lWSleKL~~~~nRL~~MREMYq~~~e~~~~~~d~~~~~~~~~DPFYD~~p~fsLIGrA~VyLsnLly~V~L~~~VpI  106 (231)
                      ..++|+.+|+       ..||+||....++.....+..++..++.||||++++|+.++| ++|||++|+|++|+.++++|
T Consensus       737 ~t~~w~~ekl-------~~~R~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g-~~~~l~~l~~~~~l~~~~~~  808 (1221)
T KOG0245|consen  737 ATHLWSKEKL-------DMIRELGEQEAEMATSDGDESEDIATGSDPFYERRHWFKLLG-ILVRLSSLAYPVPLIAKKAI  808 (1221)
T ss_pred             hHHHHHHHHH-------HHHHHhchhhhhhcccCCCccccccccCCccccchhHHHHHH-HHHHHHhcccchhHHHhhhh
Confidence            3689999999       899999999998887777767888999999999999999999 89999999999999999999


Q ss_pred             EcCCCCeeEEEEEEEEEec-CCCccc
Q psy7944         107 VNEKGDVKGHLKIAVQIVT-DEESTD  131 (231)
Q Consensus       107 VsekGEVkG~LrVeVqpis-d~e~~d  131 (231)
                      ++.+|+++|.|+|++++++ +++.+|
T Consensus       809 ~~~~g~~kg~lt~~~~~~~~d~e~~d  834 (1221)
T KOG0245|consen  809 VELQGQEKGMLTVAVQPVEADDEELD  834 (1221)
T ss_pred             hhhhccccceeeeeccccccCCcccc
Confidence            9999999999999999994 666555

>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)

Probab=91.87  E-value=0.28  Score=37.85  Aligned_cols=43  Identities=26%  Similarity=0.305  Sum_probs=38.0

Q ss_pred             ceeEEeeeeeeccccccccccceeEEEEcCCC-CeeEEEEEEEE
Q psy7944          80 WFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKG-DVKGHLKIAVQ  122 (231)
Q Consensus        80 ~fsLIGrA~VyLsnLly~V~L~~~VpIVsekG-EVkG~LrVeVq  122 (231)
                      ...+||.+.+.|+.|...-+.+..+++.+.+| +..|.|+|+|.
T Consensus        75 ~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~G~l~l~~~  118 (121)
T cd04042          75 TDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDEDLGYISLVVT  118 (121)
T ss_pred             CCcceEEEEEEHHHcCCCCCeEEEEECCCCCCccCceEEEEEEE
Confidence            34689999999999998889999999998876 78899999886

MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein

>PF09308 LuxQ-periplasm: LuxQ, periplasmic; InterPro: IPR015387 This entry represents the periplasmic sensor domain of the prokaryotic protein LuxQ, that assumes a structure consisting of two tandem Per/ARNT/Simple-minded (PAS) folds []

Probab=83.83  E-value=1.3  Score=40.37  Aligned_cols=26  Identities=31%  Similarity=0.512  Sum_probs=21.6

Q ss_pred             ccccceeEEEEcC-CCCeeEEEEEEEE
Q psy7944          97 PIPLIQKVAIVNE-KGDVKGHLKIAVQ  122 (231)
Q Consensus        97 ~V~L~~~VpIVse-kGEVkG~LrVeVq  122 (231)
                      ..-|..++||++. +|||.|+|-++|.
T Consensus       125 ~~lLvRR~pIi~~~tGEVlG~Ly~gvV  151 (238)
T PF09308_consen  125 RYLLVRRTPIIDPKTGEVLGYLYIGVV  151 (238)
T ss_dssp             EEEEEEEEEEE-TTTSBEEEEEEEEEE
T ss_pred             eEEEEeecceeeCCCCeEEEEEEEEEE
Confidence            3457789999997 9999999999984

; GO: 0004673 protein histidine kinase activity, 0016791 phosphatase activity; PDB: 2HJ9_C 2HJE_A 1ZHH_B 3C30_A 3C38_A.

>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins

Probab=83.41  E-value=1.4  Score=33.39  Aligned_cols=43  Identities=21%  Similarity=0.165  Sum_probs=31.8

Q ss_pred             ceeEEeeeeeeccccccccccceeEEEEcCCCCeeEEEEEEEE
Q psy7944          80 WFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQ  122 (231)
Q Consensus        80 ~fsLIGrA~VyLsnLly~V~L~~~VpIVsekGEVkG~LrVeVq  122 (231)
                      ...+||.+.+.|+.|...-........+..+|...|.|+|.++
T Consensus        79 ~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~~G~i~~~l~  121 (124)
T cd04044          79 KDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKPVGELNYDLR  121 (124)
T ss_pred             CCceeEEEEEEHHHhccCccccCcchhhhcCCccceEEEEEEE
Confidence            3578999999999998665543333333468888999999986

5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.

>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function

Probab=81.03  E-value=2.3  Score=33.99  Aligned_cols=42  Identities=17%  Similarity=0.240  Sum_probs=33.0

Q ss_pred             eeEEeeeeeeccccccccc--cceeEEEEcCCCCeeEEEEEEEE
Q psy7944          81 FRLVGRAFVYLSNLMYPIP--LIQKVAIVNEKGDVKGHLKIAVQ  122 (231)
Q Consensus        81 fsLIGrA~VyLsnLly~V~--L~~~VpIVsekGEVkG~LrVeVq  122 (231)
                      |.+||++.+.|..|+....  +..++.+++-.|++.|.|++.++
T Consensus        60 ~~tla~~~i~l~~ll~~~~~~i~~~~~l~g~~~~~~g~l~y~~r  103 (107)
T PF11618_consen   60 FETLAAGQISLRPLLESNGERIHGSATLVGVSGEDFGTLEYWIR  103 (107)
T ss_dssp             EEEEEEEEE--SHHHH--S--EEEEEEE-BSSS-TSEEEEEEEE
T ss_pred             eEEEEEEEeechhhhcCCCceEEEEEEEeccCCCeEEEEEEEEE
Confidence            7899999999999997765  88899999999999999999886

It may be the C2 domain from KIAA1005 however this cannot be confirmed. ; PDB: 2YRB_A.

>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein

Probab=80.16  E-value=5.4  Score=31.04  Aligned_cols=47  Identities=15%  Similarity=0.174  Sum_probs=36.9

Q ss_pred             eeEEeeeeeeccccccccccceeEEEEcC---CCCeeEEEEEEEEEecCC
Q psy7944          81 FRLVGRAFVYLSNLMYPIPLIQKVAIVNE---KGDVKGHLKIAVQIVTDE  127 (231)
Q Consensus        81 fsLIGrA~VyLsnLly~V~L~~~VpIVse---kGEVkG~LrVeVqpisd~  127 (231)
                      ..+||.+.+.|+.|.-.-.....+|+-..   .+.+.|.|+++++-+..+
T Consensus        74 ~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~~~~  123 (126)
T cd08678          74 SKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFMEPA  123 (126)
T ss_pred             CceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEeccc
Confidence            57899999999998865556677787755   356899999999877544

The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	231
2hje_A	221	Autoinducer 2 sensor kinase/phosphatase LUXQ; PER/	83.48
2dmh_A	140	Myoferlin; beta-sandwich, FER-1-like protein 3, mu	82.83
3c38_A	270	Autoinducer 2 sensor kinase/phosphatase LUXQ; 2-co	80.93

>2hje_A Autoinducer 2 sensor kinase/phosphatase LUXQ; PER/ARNT/simple-minded (PAS) fold, autoinducer-2 (AI-2), quorum sensing, histidine sensor kinase; 1.70A {Vibrio harveyi} SCOP: d.110.6.3 PDB: 2hj9_C 1zhh_B*

Probab=83.48  E-value=0.8  Score=40.18  Aligned_cols=24  Identities=33%  Similarity=0.465  Sum_probs=21.4

Q ss_pred             ccceeEEEEcC-CCCeeEEEEEEEE
Q psy7944          99 PLIQKVAIVNE-KGDVKGHLKIAVQ  122 (231)
Q Consensus        99 ~L~~~VpIVse-kGEVkG~LrVeVq  122 (231)
                      =|..++||++. +|||.|+|-++|.
T Consensus       117 lLvRR~pIi~~~tGeVlG~Ly~gvV  141 (221)
T 2hje_A          117 MLVRRVPILDPSTGEVLGFSFNAVV  141 (221)
T ss_dssp             EEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred             EEEEccceecCCCCcEEEEEEEEEE
Confidence            36789999997 9999999999984

>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=82.83  E-value=2.6  Score=31.49  Aligned_cols=44  Identities=25%  Similarity=0.352  Sum_probs=33.9

Q ss_pred             eeEEeeeeeecccccccccccee---EEEEcCCC-CeeEEEEEEEEEe
Q psy7944          81 FRLVGRAFVYLSNLMYPIPLIQK---VAIVNEKG-DVKGHLKIAVQIV  124 (231)
Q Consensus        81 fsLIGrA~VyLsnLly~V~L~~~---VpIVsekG-EVkG~LrVeVqpi  124 (231)
                      ..+||.+.|.|+.|...-...+-   +|+.+.+| ...|.|+|.++-.
T Consensus        85 ~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~  132 (140)
T 2dmh_A           85 NKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYD  132 (140)
T ss_dssp             CCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEEC
T ss_pred             CceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEE
Confidence            46899999999999766554544   45888766 5779999999765

>3c38_A Autoinducer 2 sensor kinase/phosphatase LUXQ; 2-component system, quorum sensing, histidine kinase, hydrolase, inner membrane, membrane; 2.30A {Vibrio cholerae} PDB: 3c30_A

Probab=80.93  E-value=0.97  Score=40.69  Aligned_cols=24  Identities=21%  Similarity=0.498  Sum_probs=20.5

Q ss_pred             ccceeEEEEcC-CCCeeEEEEEEEE
Q psy7944          99 PLIQKVAIVNE-KGDVKGHLKIAVQ  122 (231)
Q Consensus        99 ~L~~~VpIVse-kGEVkG~LrVeVq  122 (231)
                      =|..++||++. +|||.|+|-++|.
T Consensus       136 lLvRr~pIid~~TGEVlG~Ly~gvV  160 (270)
T 3c38_A          136 ILMRRSSLIEAGTGQVVGYLYVGIV  160 (270)
T ss_dssp             EEEEEEEECCCC-CCCCEEEEEEEE
T ss_pred             EEEEccceecCCCCcEEEEEEEEEE
Confidence            36789999997 9999999999984

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	231
d1wfja_	136	C2 domain protein At1g63220 {Thale cress (Arabidop	86.63
d2hjea1	219	Autoinducer 2 sensor kinase/phosphatase LuxQ {Vibr	81.26

>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2 domain protein At1g63220
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.63  E-value=0.2  Score=36.27  Aligned_cols=45  Identities=18%  Similarity=0.124  Sum_probs=33.4

Q ss_pred             ceeEEeeeeeeccccccccccceeEEEEcCCCCeeEEEEEEEEEe
Q psy7944          80 WFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIV  124 (231)
Q Consensus        80 ~fsLIGrA~VyLsnLly~V~L~~~VpIVsekGEVkG~LrVeVqpi  124 (231)
                      ...+||++.|.|+.|+..-.......-+...++.+|.|+|++.-.
T Consensus        85 ~d~~iG~~~i~L~~l~~~~~~~~~~~~l~~~~~~~G~i~l~l~~~  129 (136)
T d1wfja_          85 EDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFK  129 (136)
T ss_dssp             TTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred             CCCEEEEEEEEhHHhcccCCcCcEEEEecCCCccCEEEEEEEEEE
Confidence            346899999999998765454444444456788999999999755

>d2hjea1 d.110.6.3 (A:52-270) Autoinducer 2 sensor kinase/phosphatase LuxQ {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Sensory domain-like
family: LuxQ-periplasmic domain-like
domain: Autoinducer 2 sensor kinase/phosphatase LuxQ
species: Vibrio harveyi [TaxId: 669]

Probab=81.26  E-value=0.47  Score=39.48  Aligned_cols=40  Identities=20%  Similarity=0.354  Sum_probs=28.5

Q ss_pred             CCceeEEeeeeeeccccccccccceeEEEEcC-CCCeeEEEEEEEE
Q psy7944          78 FPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNE-KGDVKGHLKIAVQ  122 (231)
Q Consensus        78 ~p~fsLIGrA~VyLsnLly~V~L~~~VpIVse-kGEVkG~LrVeVq  122 (231)
                      ..|+-+-...-+-.+.|+     ..++||++. +|||.|+|.++|.
T Consensus       100 ~~W~~i~~~~~~~~~~lL-----~rr~pIi~~~TGeVlG~ly~gvV  140 (219)
T d2hjea1         100 NNWYYINVMTSIGSRHML-----VRRVPILDPSTGEVLGFSFNAVV  140 (219)
T ss_dssp             SSCEEEEEEETTEEEEEE-----EEEEEEEETTTTEEEEEEEEEEE
T ss_pred             CceEEEEccCcccceeEE-----EEeeeeecCCCCcEEEEEEEEEE
Confidence            345554444444444443     779999997 9999999999984