Psyllid ID: psy8037

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290--
MLIRTVIPCADGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDPQSEA
ccccEEEEcccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccEEEEcccEEEEEEccccccccEEEEcEEccccEEEEEEEEEEEcccccEEEccccccccccccccccccccccccccEEcccccEEEccccccccccccccccccccccccEEEEEEEccccEEEEEEccEEEEccccccccccEEEEEEEEccccEEEEEEEccccccccccccEEEEEccccccccccccccccccccEEEEEEcccEEEEEEcccccccccc
cHHHHHHHHHHHHHHcccccccccHHHHHccccHcccHHHHHHcccccccHHHHHHcccccccccccEEEEcccEEEEEccccccccccEccccccccccEEEEEEEcccccccEEEEEEcccccccccccEEEEEcccccccccEccccEEEEccccccccccccccccccccccccEEEEEEEccccEEEEEEcccEEEEEEccccccEEEEEEEEEEcccEEEEEEcccccHcHHHHHHHHHHHHcHHHHccccccccccEEEEEEEEEEcccEEEEEEcccccccccc
mlirtvipcadgvktvnressapfkpviprelahqrpgrldiildmppasretqvkhawnpedrslnifvkdddkltfhrhpvaqstdcirgrvgfTKGFHIWEVHWSarqrgthavvgvgtidaplhsvgyqslvgsndqswgwdlgrnrlyhdsknntgltyptllkpdetfvvpdkFLVILdmdegtlsfvVDGQYLGVAFrglkgrklypiVSAVWGHCEITMKYIGGLDLildmdegtlsfvVDGQYLGVAFrglkgrklypiVSAVWGHCEItmkyiggldpqsea
mlirtvipcadgvktvnressapfkpviprelahqrpgRLDIILDMPPASRETQVkhawnpedrslnIFVKDDDKLTfhrhpvaqstdcirgRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLtyptllkpdetFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIggldpqsea
MLIRTVIPCADGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDPQSEA
****TVIPCADGV**************************LDIIL**************W***DRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGL******
*LIRTVIPCADGV***********************************ASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVD**YLGVAFRGLKGRKLYPIVSAVWGHCEITMK***********
MLIRTVIPCADGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDPQSEA
MLIRTVIPCADGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDP****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLIRTVIPCADGVKTVNRESSAPFKPVIPRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDPQSEA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query292 2.2.26 [Sep-21-2011]
Q8R5B6273 SPRY domain-containing SO yes N/A 0.702 0.750 0.731 3e-90
Q9D5L7273 SPRY domain-containing SO no N/A 0.760 0.813 0.675 3e-90
Q5E9X6273 SPRY domain-containing SO yes N/A 0.760 0.813 0.675 4e-90
Q96BD6273 SPRY domain-containing SO yes N/A 0.760 0.813 0.675 4e-90
Q96A44273 SPRY domain-containing SO no N/A 0.681 0.728 0.738 2e-89
Q5M877264 SPRY domain-containing SO no N/A 0.660 0.731 0.533 4e-56
Q99619263 SPRY domain-containing SO no N/A 0.660 0.733 0.528 6e-56
O88838264 SPRY domain-containing SO no N/A 0.660 0.731 0.533 8e-56
B4J6Q0252 F-box/SPRY domain-contain N/A N/A 0.582 0.674 0.502 6e-40
B4KNC5252 F-box/SPRY domain-contain N/A N/A 0.582 0.674 0.491 7e-40
>sp|Q8R5B6|SPSB4_MOUSE SPRY domain-containing SOCS box protein 4 OS=Mus musculus GN=Spsb4 PE=1 SV=1 Back     alignment and function desciption
 Score =  332 bits (850), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 150/205 (73%), Positives = 171/205 (83%)

Query: 30  RELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDC 89
           R L   RP RLD +LDMP A    Q++HAWNPEDRSLN+FVKDDD+LTFHRHPVAQSTD 
Sbjct: 27  RGLEPGRPARLDQLLDMPAAGLAVQLRHAWNPEDRSLNVFVKDDDRLTFHRHPVAQSTDG 86

Query: 90  IRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGR 149
           IRG+VG  +G H W++HW ARQRGTHAVVGV T  APLHSVGY +LVGS+ +SWGWDLGR
Sbjct: 87  IRGKVGHARGLHAWQIHWPARQRGTHAVVGVATARAPLHSVGYTALVGSDSESWGWDLGR 146

Query: 150 NRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKG 209
           +RLYHD KN  G+ YP  L PDE F +PD  LV+LDMDEGTLSF+VDGQYLGVAFRGLKG
Sbjct: 147 SRLYHDGKNRPGVAYPAFLGPDEAFALPDSLLVVLDMDEGTLSFIVDGQYLGVAFRGLKG 206

Query: 210 RKLYPIVSAVWGHCEITMKYIGGLD 234
           +KLYP+VSAVWGHCE+TM+YI GLD
Sbjct: 207 KKLYPVVSAVWGHCEVTMRYINGLD 231
Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Mus musculus (taxid: 10090)
>sp|Q9D5L7|SPSB1_MOUSE SPRY domain-containing SOCS box protein 1 OS=Mus musculus GN=Spsb1 PE=1 SV=1 Back     alignment and function description
>sp|Q5E9X6|SPSB1_BOVIN SPRY domain-containing SOCS box protein 1 OS=Bos taurus GN=SPSB1 PE=2 SV=1 Back     alignment and function description
>sp|Q96BD6|SPSB1_HUMAN SPRY domain-containing SOCS box protein 1 OS=Homo sapiens GN=SPSB1 PE=1 SV=1 Back     alignment and function description
>sp|Q96A44|SPSB4_HUMAN SPRY domain-containing SOCS box protein 4 OS=Homo sapiens GN=SPSB4 PE=1 SV=1 Back     alignment and function description
>sp|Q5M877|SPSB2_RAT SPRY domain-containing SOCS box protein 2 OS=Rattus norvegicus GN=Spsb2 PE=2 SV=1 Back     alignment and function description
>sp|Q99619|SPSB2_HUMAN SPRY domain-containing SOCS box protein 2 OS=Homo sapiens GN=SPSB2 PE=1 SV=1 Back     alignment and function description
>sp|O88838|SPSB2_MOUSE SPRY domain-containing SOCS box protein 2 OS=Mus musculus GN=Spsb2 PE=1 SV=1 Back     alignment and function description
>sp|B4J6Q0|FBSP1_DROGR F-box/SPRY domain-containing protein 1 OS=Drosophila grimshawi GN=Fsn PE=3 SV=1 Back     alignment and function description
>sp|B4KNC5|FBSP1_DROMO F-box/SPRY domain-containing protein 1 OS=Drosophila mojavensis GN=Fsn PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query292
242020565280 SPRY domain-containing SOCS box protein, 0.763 0.796 0.88 1e-115
328717959 411 PREDICTED: SPRY domain-containing SOCS b 0.835 0.593 0.772 1e-112
270011657362 hypothetical protein TcasGA2_TC005709 [T 0.763 0.616 0.84 1e-110
189240181279 PREDICTED: similar to conserved hypothet 0.763 0.799 0.84 1e-109
312373290279 hypothetical protein AND_17642 [Anophele 0.770 0.806 0.797 1e-107
157128191355 hypothetical protein AaeL_AAEL011069 [Ae 0.763 0.628 0.814 1e-107
345480355 452 PREDICTED: SPRY domain-containing SOCS b 0.760 0.491 0.777 1e-107
383848489 464 PREDICTED: SPRY domain-containing SOCS b 0.763 0.480 0.761 1e-106
170038932366 conserved hypothetical protein [Culex qu 0.763 0.609 0.814 1e-106
307209187 449 SPRY domain-containing SOCS box protein 0.763 0.496 0.765 1e-105
>gi|242020565|ref|XP_002430723.1| SPRY domain-containing SOCS box protein, putative [Pediculus humanus corporis] gi|212515913|gb|EEB17985.1| SPRY domain-containing SOCS box protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/225 (88%), Positives = 209/225 (92%), Gaps = 2/225 (0%)

Query: 12  GVKTVNRESSAPFKPVIPRELAHQ--RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIF 69
           GVK VNRES  PFKPVIPRELA    RP RLDI+LDMPPASR+ Q+KHAWNPEDRSLNIF
Sbjct: 10  GVKNVNRESPQPFKPVIPRELAQDFARPARLDILLDMPPASRDCQIKHAWNPEDRSLNIF 69

Query: 70  VKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHS 129
           VKDDDKLTFHRHPVAQSTDCIRG+VGFTKG H+WEVHWS RQRGTHAVVGV T DAPLHS
Sbjct: 70  VKDDDKLTFHRHPVAQSTDCIRGKVGFTKGLHVWEVHWSTRQRGTHAVVGVATQDAPLHS 129

Query: 130 VGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEG 189
           VGYQSLVGSND SWGWDLGRN+LYHDSKNN G+TYP LLKPDETF+VPDKFLV+LDMD+G
Sbjct: 130 VGYQSLVGSNDLSWGWDLGRNKLYHDSKNNAGVTYPALLKPDETFIVPDKFLVVLDMDDG 189

Query: 190 TLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLD 234
           TLSFVVDGQYLG+AFRGLKGRKLYPIVSAVWGHCEITMKYIGGLD
Sbjct: 190 TLSFVVDGQYLGIAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLD 234

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328717959|ref|XP_003246347.1| PREDICTED: SPRY domain-containing SOCS box protein 1-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|270011657|gb|EFA08105.1| hypothetical protein TcasGA2_TC005709 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|189240181|ref|XP_975181.2| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|312373290|gb|EFR21056.1| hypothetical protein AND_17642 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|157128191|ref|XP_001655083.1| hypothetical protein AaeL_AAEL011069 [Aedes aegypti] gi|157128193|ref|XP_001655084.1| hypothetical protein AaeL_AAEL011069 [Aedes aegypti] gi|108872651|gb|EAT36876.1| AAEL011069-PA [Aedes aegypti] gi|403183162|gb|EJY57897.1| AAEL011069-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|345480355|ref|XP_001606358.2| PREDICTED: SPRY domain-containing SOCS box protein 1-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|383848489|ref|XP_003699882.1| PREDICTED: SPRY domain-containing SOCS box protein 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|170038932|ref|XP_001847301.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167862542|gb|EDS25925.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|307209187|gb|EFN86298.1| SPRY domain-containing SOCS box protein 1 [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query292
FB|FBgn0026238363 gus "gustavus" [Drosophila mel 0.763 0.614 0.783 1e-98
UNIPROTKB|E1C2M3273 SPSB4 "Uncharacterized protein 0.75 0.802 0.738 5e-92
ZFIN|ZDB-GENE-070911-3277 spsb4a "splA/ryanodine recepto 0.756 0.797 0.706 1.2e-88
UNIPROTKB|E1C5U4273 SPSB1 "Uncharacterized protein 0.760 0.813 0.684 2.5e-88
ZFIN|ZDB-GENE-030131-6122273 spsb1 "splA/ryanodine receptor 0.760 0.813 0.693 4.1e-88
UNIPROTKB|Q5E9X6273 SPSB1 "SPRY domain-containing 0.760 0.813 0.68 9.9e-87
UNIPROTKB|Q96BD6273 SPSB1 "SPRY domain-containing 0.760 0.813 0.68 9.9e-87
MGI|MGI:1921896273 Spsb1 "splA/ryanodine receptor 0.760 0.813 0.68 9.9e-87
UNIPROTKB|F1MMF8273 SPSB1 "SPRY domain-containing 0.760 0.813 0.675 1.3e-86
UNIPROTKB|F1PE95273 SPSB1 "Uncharacterized protein 0.760 0.813 0.68 1.3e-86
FB|FBgn0026238 gus "gustavus" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
 Identities = 177/226 (78%), Positives = 201/226 (88%)

Query:    12 GVKTVNR-ESSAPFKPVIPRELAHQ--RPGRLDIILDMPPASRETQVKHAWNPEDRSLNI 68
             GVKTV+R +S + FKP+IPREL     +P R+DI+LDMPPASR+ Q+KH+WN EDRSLNI
Sbjct:    92 GVKTVSRNDSQSTFKPIIPRELQADFVKPARIDILLDMPPASRDLQLKHSWNSEDRSLNI 151

Query:    69 FVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLH 128
             FVK+DDKLTFHRHPVAQSTDCIRG+VG TKG HIWE++W  RQRGTHAVVGV T DAPLH
Sbjct:   152 FVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLH 211

Query:   129 SVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDE 188
             SVGYQSLVGS +QSWGWDLGRN+LYHDSKN  G+TYP +LK DE F+VPDKFLV LDMDE
Sbjct:   212 SVGYQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFLVALDMDE 271

Query:   189 GTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLD 234
             GTLSF+VD QYLG+AFRGL+G+KLYPIVSAVWGHCEITM+YIGGLD
Sbjct:   272 GTLSFIVDQQYLGIAFRGLRGKKLYPIVSAVWGHCEITMRYIGGLD 317
GO:0046843 "dorsal appendage formation" evidence=IMP
GO:0007314 "oocyte anterior/posterior axis specification" evidence=IMP
GO:0035556 "intracellular signal transduction" evidence=IEA
GO:0005515 "protein binding" evidence=IPI
UNIPROTKB|E1C2M3 SPSB4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070911-3 spsb4a "splA/ryanodine receptor domain and SOCS box containing 4a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1C5U4 SPSB1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-6122 spsb1 "splA/ryanodine receptor domain and SOCS box containing 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q5E9X6 SPSB1 "SPRY domain-containing SOCS box protein 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q96BD6 SPSB1 "SPRY domain-containing SOCS box protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1921896 Spsb1 "splA/ryanodine receptor domain and SOCS box containing 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1MMF8 SPSB1 "SPRY domain-containing SOCS box protein 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PE95 SPSB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q96BD6SPSB1_HUMANNo assigned EC number0.67550.76020.8131yesN/A
Q8R5B6SPSB4_MOUSENo assigned EC number0.73170.70200.7509yesN/A
Q5E9X6SPSB1_BOVINNo assigned EC number0.67550.76020.8131yesN/A
Q96A44SPSB4_HUMANNo assigned EC number0.73860.68150.7289noN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query292
cd12906174 cd12906, SPRY_SOCS1-2-4, SPRY domain in the suppre 1e-136
cd12875171 cd12875, SPRY_SOCS_Fbox, SPRY domain in Fbxo45 and 3e-93
cd12907175 cd12907, SPRY_Fbox, SPRY domain in the F-box famil 1e-60
cd12876187 cd12876, SPRY_SOCS3, SPRY domain in the suppressor 6e-27
smart00449122 smart00449, SPRY, Domain in SPla and the RYanodine 5e-19
cd11709118 cd11709, SPRY, SPRY domain 7e-18
pfam00622125 pfam00622, SPRY, SPRY domain 3e-17
cd12907175 cd12907, SPRY_Fbox, SPRY domain in the F-box famil 2e-14
cd12876187 cd12876, SPRY_SOCS3, SPRY domain in the suppressor 7e-10
cd12889172 cd12889, SPRY_PRY_TRIM67_9, PRY/SPRY domain in tri 3e-09
cd11709118 cd11709, SPRY, SPRY domain 6e-08
cd12891169 cd12891, SPRY_PRY_C-IV_2, PRY/SPRY domain in tripa 3e-07
cd12881160 cd12881, SPRY_HERC1, SPRY domain in HERC1 1e-06
cd12885132 cd12885, SPRY_RanBP_like, SPRY domain in Ran bindi 2e-06
cd12881160 cd12881, SPRY_HERC1, SPRY domain in HERC1 3e-06
cd12882128 cd12882, SPRY_RNF123, SPRY domain at N-terminus of 3e-06
pfam00622125 pfam00622, SPRY, SPRY domain 5e-06
cd13734169 cd13734, SPRY_PRY_C-I, PRY/SPRY domain in triparti 7e-06
cd12884176 cd12884, SPRY_hnRNP, SPRY domain in heterogeneous 1e-04
cd12896182 cd12896, SPRY_PRY_TRIM65, PRY/SPRY domain in tripa 3e-04
cd12872149 cd12872, SPRY_Ash2, SPRY domain in Ash2 3e-04
cd13736169 cd13736, SPRY_PRY_TRIM25, PRY/SPRY domain in tripa 5e-04
cd12882128 cd12882, SPRY_RNF123, SPRY domain at N-terminus of 6e-04
smart00449122 smart00449, SPRY, Domain in SPla and the RYanodine 7e-04
cd12885132 cd12885, SPRY_RanBP_like, SPRY domain in Ran bindi 7e-04
cd12886128 cd12886, SPRY_like, SPRY domain-like in bacteria 8e-04
cd12893171 cd12893, SPRY_PRY_TRIM35, PRY/SPRY domain in tripa 0.001
cd12902168 cd12902, SPRY_PRY_RNF135, PRY/SPRY domain in RING 0.002
cd12873155 cd12873, SPRY_DDX1, SPRY domain associated with DE 0.002
cd12873155 cd12873, SPRY_DDX1, SPRY domain associated with DE 0.002
cd12897186 cd12897, SPRY_PRY_TRIM50_62_72, PRY/SPRY domain in 0.002
cd12874167 cd12874, SPRY_PRY, PRY/SPRY domain, also known as 0.002
cd12909153 cd12909, SPRY_RanBP9_10, SPRY domain in Ran bindin 0.004
>gnl|CDD|240486 cd12906, SPRY_SOCS1-2-4, SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4) Back     alignment and domain information 
 Score =  382 bits (983), Expect = e-136
 Identities = 145/174 (83%), Positives = 161/174 (92%)

Query: 57  HAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTHA 116
           HAWNPEDRSLNIFVK+DD LTFHRHPVAQSTD IRG+VG+++G H+WE++W  RQRGTHA
Sbjct: 1   HAWNPEDRSLNIFVKEDDPLTFHRHPVAQSTDGIRGKVGYSRGLHVWEINWPTRQRGTHA 60

Query: 117 VVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVV 176
           VVGV T +APLH VGYQSLVGSN++SWGWDLGRN+LYHDSKNN G+TYP  LKPDE FVV
Sbjct: 61  VVGVATAEAPLHCVGYQSLVGSNEESWGWDLGRNKLYHDSKNNPGVTYPAFLKPDENFVV 120

Query: 177 PDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYI 230
           PDKFLV+LDMDEGTLSFVVDGQYLGVAFRGLKG+ LYPIVSAVWGHCE+TMKYI
Sbjct: 121 PDKFLVVLDMDEGTLSFVVDGQYLGVAFRGLKGKTLYPIVSAVWGHCEVTMKYI 174

The SPRY domain-containing SOCS box protein family (SPSB1-4, also known as SSB-1 to -4) is composed of a central SPRY protein interaction domain and a C-terminal SOCS box. All four SPSB proteins interact with c-Met, the hepatocyte growth factor receptor, but only SPSB1, SPSB2, and SPSB4 interact with prostate apoptosis response protein 4 (Par-4). They are negative regulators that recruit the ECS E3 ubiquitin ligase complex to polyubiquitinate inducible nitric-oxide synthase (iNOS), resulting in its proteasomal degradation, thus contributing to protection against the cytotoxic effect of iNOS in activated macrophages. It has been shown that SPSB1 and SPSB4 induce the degradation of iNOS more strongly than SPSB2. The Drosophila melanogaster SPSB1 homolog, GUSTAVUS, interacts with the DEAD box RNA helicase Vasa. Suppressor of cytokine signaling (SOCS) proteins negatively regulate signaling from JAK-associated cytokine receptor complexes, and play key roles in the regulation of immune homeostasis. Length = 174
>gnl|CDD|240455 cd12875, SPRY_SOCS_Fbox, SPRY domain in Fbxo45 and suppressors of cytokine signaling (SOCS) proteins Back     alignment and domain information
>gnl|CDD|240487 cd12907, SPRY_Fbox, SPRY domain in the F-box family Fbxo45 Back     alignment and domain information
>gnl|CDD|240456 cd12876, SPRY_SOCS3, SPRY domain in the suppressor of cytokine signaling 3 (SOCS3) family Back     alignment and domain information
>gnl|CDD|214669 smart00449, SPRY, Domain in SPla and the RYanodine Receptor Back     alignment and domain information
>gnl|CDD|240451 cd11709, SPRY, SPRY domain Back     alignment and domain information
>gnl|CDD|216029 pfam00622, SPRY, SPRY domain Back     alignment and domain information
>gnl|CDD|240487 cd12907, SPRY_Fbox, SPRY domain in the F-box family Fbxo45 Back     alignment and domain information
>gnl|CDD|240456 cd12876, SPRY_SOCS3, SPRY domain in the suppressor of cytokine signaling 3 (SOCS3) family Back     alignment and domain information
>gnl|CDD|240469 cd12889, SPRY_PRY_TRIM67_9, PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67 Back     alignment and domain information
>gnl|CDD|240451 cd11709, SPRY, SPRY domain Back     alignment and domain information
>gnl|CDD|240471 cd12891, SPRY_PRY_C-IV_2, PRY/SPRY domain in tripartite motif-containing (TRIM) proteins, including TRIM14-like, TRIM16-like, TRIM25-like, TRIM47-like and RNF135 and stonustoxin Back     alignment and domain information
>gnl|CDD|240461 cd12881, SPRY_HERC1, SPRY domain in HERC1 Back     alignment and domain information
>gnl|CDD|240465 cd12885, SPRY_RanBP_like, SPRY domain in Ran binding proteins, SSH4, HECT E3 and SPRYD3 Back     alignment and domain information
>gnl|CDD|240461 cd12881, SPRY_HERC1, SPRY domain in HERC1 Back     alignment and domain information
>gnl|CDD|240462 cd12882, SPRY_RNF123, SPRY domain at N-terminus of ring finger protein 123 Back     alignment and domain information
>gnl|CDD|216029 pfam00622, SPRY, SPRY domain Back     alignment and domain information
>gnl|CDD|240492 cd13734, SPRY_PRY_C-I, PRY/SPRY domain in tripartite motif-containing proteins 1, 9, 18, 36, 46, 67,76 (TRIM1, TRIM9, TRIM18, TRIM36, TRIM46, TRIM67, TRIM76) Back     alignment and domain information
>gnl|CDD|240464 cd12884, SPRY_hnRNP, SPRY domain in heterogeneous nuclear ribonucleoprotein U-like (hnRNP) protein 1 Back     alignment and domain information
>gnl|CDD|240476 cd12896, SPRY_PRY_TRIM65, PRY/SPRY domain in tripartite motif-containing domain 65 (TRIM65) Back     alignment and domain information
>gnl|CDD|240452 cd12872, SPRY_Ash2, SPRY domain in Ash2 Back     alignment and domain information
>gnl|CDD|240494 cd13736, SPRY_PRY_TRIM25, PRY/SPRY domain in tripartite motif-containing domain 25 (TRIM25) Back     alignment and domain information
>gnl|CDD|240462 cd12882, SPRY_RNF123, SPRY domain at N-terminus of ring finger protein 123 Back     alignment and domain information
>gnl|CDD|214669 smart00449, SPRY, Domain in SPla and the RYanodine Receptor Back     alignment and domain information
>gnl|CDD|240465 cd12885, SPRY_RanBP_like, SPRY domain in Ran binding proteins, SSH4, HECT E3 and SPRYD3 Back     alignment and domain information
>gnl|CDD|240466 cd12886, SPRY_like, SPRY domain-like in bacteria Back     alignment and domain information
>gnl|CDD|240473 cd12893, SPRY_PRY_TRIM35, PRY/SPRY domain in tripartite motif-containing protein 35 (TRIM35) Back     alignment and domain information
>gnl|CDD|240482 cd12902, SPRY_PRY_RNF135, PRY/SPRY domain in RING finger protein RNF135 Back     alignment and domain information
>gnl|CDD|240453 cd12873, SPRY_DDX1, SPRY domain associated with DEAD box gene DDX1 Back     alignment and domain information
>gnl|CDD|240453 cd12873, SPRY_DDX1, SPRY domain associated with DEAD box gene DDX1 Back     alignment and domain information
>gnl|CDD|240477 cd12897, SPRY_PRY_TRIM50_62_72, PRY/SPRY domain in tripartite motif-binding (TRIM) proteins TRIM50, TRIM62 and TRIM72 Back     alignment and domain information
>gnl|CDD|240454 cd12874, SPRY_PRY, PRY/SPRY domain, also known as B30 Back     alignment and domain information
>gnl|CDD|240489 cd12909, SPRY_RanBP9_10, SPRY domain in Ran binding proteins 9 and 10 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 292
KOG3953|consensus242 100.0
smart00449122 SPRY Domain in SPla and the RYanodine Receptor. Do 99.92
PF00622124 SPRY: SPRY domain; InterPro: IPR003877 The SPRY do 99.9
KOG4367|consensus699 99.76
KOG2626|consensus544 99.74
KOG0349|consensus 725 99.72
KOG4030|consensus197 99.45
KOG2243|consensus 5019 98.62
KOG3953|consensus242 97.92
KOG1477|consensus 469 97.64
PF1376549 PRY: SPRY-associated domain; PDB: 3KB5_A 2VOK_A 2V 97.49
smart0058952 PRY associated with SPRY domains. 95.99
PF00622124 SPRY: SPRY domain; InterPro: IPR003877 The SPRY do 95.15
KOG1477|consensus 469 91.47
smart00449122 SPRY Domain in SPla and the RYanodine Receptor. Do 91.31
KOG2243|consensus 5019 91.18
KOG2177|consensus386 87.86
PF0717769 Neuralized: Neuralized; InterPro: IPR006573 NEUZ i 81.7
>KOG3953|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.5e-44  Score=310.80  Aligned_cols=199  Identities=64%  Similarity=1.135  Sum_probs=177.1

Q ss_pred             CCCChhhccCCCCCCccCccceeeccCCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCcCCeEEEEEEEeeecCCce
Q psy8037          36 RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTH  115 (292)
Q Consensus        36 ~~~~~~~L~~~~~~~~~~~~~~t~dp~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfssGkhYWEV~V~~~~~~~~  115 (292)
                      .+.+++.|+.|++....+|..|.|++++++.|+.+.+++++++++||+++++++++|+.+++.|+|+|||.|...+.||+
T Consensus         6 ~~~~l~~l~~~~~~~~~~~~~~~w~~~drs~nv~vk~~~~~tfhrhpvaqstd~~rGk~g~~~g~h~w~i~w~~r~~GT~   85 (242)
T KOG3953|consen    6 ESVRLDQLLFMPPSALGVQAQHGWSPSDRSLNVFVKLPDGLTFHRHPVAQSTDGIRGKRGYSRGRHAWEIAWPNRQRGTH   85 (242)
T ss_pred             cccccchhhhcCCcchhhHHhhccCcccccceeEEecCCcceEEecCCccccccccceeeeccCceEEEEEecCCccCCc
Confidence            34567788899988777777799999999999999988889999999999999999999999999999999999899999


Q ss_pred             eEEEEeeccccCCcCCcccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEE
Q psy8037         116 AVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVV  195 (292)
Q Consensus       116 w~vGVa~~~~~l~~~g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~~d~IGV~LD~~~GtLsFy~  195 (292)
                      .+|||||+.+++|+.++.+++|++++||||.+.++.++|++..  ...||++++ .+.+..|++|+|.|||++|+++|.+
T Consensus        86 avVGIaTk~Aplha~gy~aLlGs~~qswGw~l~~~~l~H~g~~--~~~yp~~~~-~p~~~vp~ri~viLDm~egtl~F~~  162 (242)
T KOG3953|consen   86 AVVGIATKVAPLHAVGYTALLGSNSQSWGWDLGRNVLYHDGQV--AGLYPALNR-QPKYNVPDRILVILDMIEGTLSFAA  162 (242)
T ss_pred             ceEEEEcccCchhhhHHHHHhCCCCCccceecccceeeecCcc--ccccccccC-CchhcCCceEEEEEeeccceEEEEE
Confidence            9999999999999999999999999999999999999999843  357998877 6889999999999999988888873


Q ss_pred             CCeeeeeeeeecCCCceEEEEEeecCCeEEEEEEccCCCccccCCCceeEEeeCCeeeeeecCCCcCccccceeeeeeee
Q psy8037         196 DGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGH  275 (292)
Q Consensus       196 ng~~lg~aF~~~~~~~lyP~fs~~~~~~~v~l~~~~~~~~~ld~~~~~l~f~~~~~~l~~af~~l~~~~l~~~~~~~~~~  275 (292)
                      +                                                     ++|||+||+||++++|||++|+|||+
T Consensus       163 ~-----------------------------------------------------~e~LGvAFRgL~~~~LYP~Vsav~g~  189 (242)
T KOG3953|consen  163 D-----------------------------------------------------GEYLGVAFRGLKDKKLYPAVSAVWGH  189 (242)
T ss_pred             C-----------------------------------------------------CeEEeeeecCCCCCcceeeeeehhcc
Confidence            3                                                     46777788888888999999999999


Q ss_pred             eeEEEEEecCCC-CCC
Q psy8037         276 CEITMKYIGGLD-PQS  290 (292)
Q Consensus       276 ~~~~~~~~~~~~-~~~  290 (292)
                      |||+|+|+|++| +|+
T Consensus       190 ~Evtm~Ylg~~~~~e~  205 (242)
T KOG3953|consen  190 CEVTMKYLGTLDVDEP  205 (242)
T ss_pred             eeEEEEEeCCcCcCCc
Confidence            999999999988 543

>smart00449 SPRY Domain in SPla and the RYanodine Receptor Back     alignment and domain information
>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function Back     alignment and domain information
>KOG4367|consensus Back     alignment and domain information
>KOG2626|consensus Back     alignment and domain information
>KOG0349|consensus Back     alignment and domain information
>KOG4030|consensus Back     alignment and domain information
>KOG2243|consensus Back     alignment and domain information
>KOG3953|consensus Back     alignment and domain information
>KOG1477|consensus Back     alignment and domain information
>PF13765 PRY: SPRY-associated domain; PDB: 3KB5_A 2VOK_A 2VOL_B 2FBE_B 2WL1_A 2IWG_E Back     alignment and domain information
>smart00589 PRY associated with SPRY domains Back     alignment and domain information
>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function Back     alignment and domain information
>KOG1477|consensus Back     alignment and domain information
>smart00449 SPRY Domain in SPla and the RYanodine Receptor Back     alignment and domain information
>KOG2243|consensus Back     alignment and domain information
>KOG2177|consensus Back     alignment and domain information
>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query292
2fnj_A226 Crystal Structure Of A B30.2SPRY DOMAIN-Containing 6e-99
2ihs_A214 Crystal Structure Of The B30.2SPRY DOMAIN OF GUSTAV 3e-98
3f2o_A233 Crystal Structure Of Human SplaRYANODINE RECEPTOR D 1e-90
2jk9_A212 The Structure Of Spla-Ryanodine Receptor Domain And 2e-90
2v24_A208 Structure Of The Human Spry Domain-Containing Socs 5e-90
3emw_A217 Crystal Structure Of Human SplaRYANODINE RECEPTOR D 5e-57
2afj_A226 Spry Domain-Containing Socs Box Protein 2 (Ssb-2) L 8e-57
3ek9_A213 Spry Domain-Containing Socs Box Protein 2: Crystal 9e-57
>pdb|2FNJ|A Chain A, Crystal Structure Of A B30.2SPRY DOMAIN-Containing Protein Gustavus In Complex With Elongin B And Elongin C Length = 226 Back     alignment and structure 
Iteration: 1

 Score =  357 bits (915), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 162/199 (81%), Positives = 182/199 (91%)
Query: 36  RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVG 95
           +P R+DI+LDMPPASR+ Q+KH+WN EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG
Sbjct: 10  KPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVG 69
Query: 96  FTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHD 155
            TKG HIWE++W  RQRGTHAVVGV T DAPLHSVGYQSLVGS +QSWGWDLGRN+LYHD
Sbjct: 70  LTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQSLVGSTEQSWGWDLGRNKLYHD 129
Query: 156 SKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPI 215
           SKN  G+TYP +LK DE F+VPDKFLV LDMDEGTLSF+VD QYLG+AFRGL+G+KLYPI
Sbjct: 130 SKNCAGVTYPAILKNDEAFLVPDKFLVALDMDEGTLSFIVDQQYLGIAFRGLRGKKLYPI 189
Query: 216 VSAVWGHCEITMKYIGGLD 234
           VSAVWGHCEITM+YIGGLD
Sbjct: 190 VSAVWGHCEITMRYIGGLD 208
>pdb|2IHS|A Chain A, Crystal Structure Of The B30.2SPRY DOMAIN OF GUSTAVUS IN Complex With A 20-Residue Vasa Peptide Length = 214 Back     alignment and structure
>pdb|3F2O|A Chain A, Crystal Structure Of Human SplaRYANODINE RECEPTOR DOMAIN AND SOCS BOX Containing 1 (Spsb1) In Complex With A 20-Residue Vasa Peptide Length = 233 Back     alignment and structure
>pdb|2JK9|A Chain A, The Structure Of Spla-Ryanodine Receptor Domain And Socs Box Containing 1 In Complex With A Par-4 Peptide Length = 212 Back     alignment and structure
>pdb|2V24|A Chain A, Structure Of The Human Spry Domain-Containing Socs Box Protein Ssb-4 Length = 208 Back     alignment and structure
>pdb|3EMW|A Chain A, Crystal Structure Of Human SplaRYANODINE RECEPTOR DOMAIN AND SOCS BOX Containing 2 (Spsb2) In Complex With A 20-Residue Vasa Peptide Length = 217 Back     alignment and structure
>pdb|2AFJ|A Chain A, Spry Domain-Containing Socs Box Protein 2 (Ssb-2) Length = 226 Back     alignment and structure
>pdb|3EK9|A Chain A, Spry Domain-Containing Socs Box Protein 2: Crystal Structure And Residues Critical For Protein Binding Length = 213 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query292
2jk9_A212 SPRY domain-containing SOCS box protein 1; transcr 6e-91
2afj_A226 Gene rich cluster, C9 gene; beta sandwich, gene re 2e-86
3emw_A217 SPRY domain-containing SOCS box protein 2; apoptos 1e-83
3toj_A213 SET1/ASH2 histone methyltransferase complex subun; 7e-22
2yyo_A171 SPRY domain-containing protein 3; NPPSFA, national 1e-20
2yyo_A171 SPRY domain-containing protein 3; NPPSFA, national 6e-06
2lm3_A208 TRIM5alpha, tripartite motif-containing protein 5; 8e-05
3kb5_A193 Tripartite motif-containing protein 72; B30.2, gus 6e-04
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A Length = 212 Back     alignment and structure
 Score =  268 bits (685), Expect = 6e-91
 Identities = 146/206 (70%), Positives = 175/206 (84%)

Query: 29  PRELAHQRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTD 88
            + L + +P RLD++LDMPP S + Q+ H+WN  DRSLN+FVK+DDKL FHRHPVAQSTD
Sbjct: 5   LQGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTD 64

Query: 89  CIRGRVGFTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLG 148
            IRG+VG+T+G H+W++ W+ RQRGTHAVVGV T DAPLHSVGY +LVG+N +SWGWDLG
Sbjct: 65  AIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHESWGWDLG 124

Query: 149 RNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLK 208
           RNRLYHD KN    TYP  L+PDETF+VPD FLV LDMD+GTLSF+VDGQY+GVAFRGLK
Sbjct: 125 RNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLK 184

Query: 209 GRKLYPIVSAVWGHCEITMKYIGGLD 234
           G+KLYP+VSAVWGHCEI M+Y+ GLD
Sbjct: 185 GKKLYPVVSAVWGHCEIRMRYLNGLD 210
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 Length = 226 Back     alignment and structure
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A Length = 217 Back     alignment and structure
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} Length = 213 Back     alignment and structure
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Length = 171 Back     alignment and structure
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Length = 171 Back     alignment and structure
>2lm3_A TRIM5alpha, tripartite motif-containing protein 5; ligase; NMR {Macaca mulatta} Length = 208 Back     alignment and structure
>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens} Length = 193 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query292
2jk9_A212 SPRY domain-containing SOCS box protein 1; transcr 100.0
3emw_A217 SPRY domain-containing SOCS box protein 2; apoptos 100.0
2afj_A226 Gene rich cluster, C9 gene; beta sandwich, gene re 100.0
3toj_A213 SET1/ASH2 histone methyltransferase complex subun; 99.98
3uv9_A186 TRIM5alpha, tripartite motif-containing protein 5; 99.97
2vok_A188 52 kDa RO protein; polymorphism, immune system, me 99.97
2fbe_A201 Predicted: similar to RET finger protein-like 1; d 99.97
2wl1_A191 Pyrin, marenostrin; amyloidosis, polymorphism, cyt 99.97
3kb5_A193 Tripartite motif-containing protein 72; B30.2, gus 99.97
4b3n_A602 Maltose-binding periplasmic protein, tripartite mo 99.96
2yyo_A171 SPRY domain-containing protein 3; NPPSFA, national 99.96
3emw_A217 SPRY domain-containing SOCS box protein 2; apoptos 98.75
2jk9_A212 SPRY domain-containing SOCS box protein 1; transcr 98.75
2afj_A226 Gene rich cluster, C9 gene; beta sandwich, gene re 98.34
2e63_A170 KIAA1787 protein; structure genomics, neuralized d 98.16
2yue_A168 Protein neuralized; structure genomics, NEUZ(NHR) 97.61
2yyo_A171 SPRY domain-containing protein 3; NPPSFA, national 96.33
3toj_A213 SET1/ASH2 histone methyltransferase complex subun; 95.27
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A Back     alignment and structure
Probab=100.00  E-value=6.5e-44  Score=312.46  Aligned_cols=201  Identities=72%  Similarity=1.337  Sum_probs=171.0

Q ss_pred             CCCCChhhccCCCCCCccCccceeeccCCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCcCCeEEEEEEEeeecCCc
Q psy8037          35 QRPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGT  114 (292)
Q Consensus        35 ~~~~~~~~L~~~~~~~~~~~~~~t~dp~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfssGkhYWEV~V~~~~~~~  114 (292)
                      ..+.+++.|++|+++....|.+++|||+++|++|.||+|++++++++|..+++.+|||+++|++|+|||||+|.+...++
T Consensus        11 ~~~~~~~~ll~~p~~~~~~~~~~tldp~ta~~~L~lsed~~~~~~~~~~~~~~~~Vlg~~~f~sGrhYWEV~v~~~~~~~   90 (212)
T 2jk9_A           11 CKPTRLDLLLDMPPVSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGT   90 (212)
T ss_dssp             CCCCHHHHHHHSCCCCHHHHHHTSEEEEEECTTEEEETTEEEEEEECCBTTEEEEEEESCCBCSSEEEEEEECCGGGCTT
T ss_pred             CCccchhhhccCCCcccccccccccChhhcCCceEEeCCCeEEEEECCCCCccceEEcCCCccCCeEEEEEEEecccCCC
Confidence            46788999999999966689999999999999999997666677777766778899999999999999999998543457


Q ss_pred             eeEEEEeeccccCCcCCcccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEE
Q psy8037         115 HAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFV  194 (292)
Q Consensus       115 ~w~vGVa~~~~~l~~~g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~~d~IGV~LD~~~GtLsFy  194 (292)
                      +|.||||++++.+++++....+|.+..||+|...+++++|++....+.+||.....++.+..+++|||+|||++|+||||
T Consensus        91 ~w~vGV~~~~~~r~~~g~~~~~G~~~~sw~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~IGv~LD~e~G~lsFy  170 (212)
T 2jk9_A           91 HAVVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLSFI  170 (212)
T ss_dssp             CCEEEEECTTSCCEEESSCCCTTSSTTEEEEETTTTEEEESTTTSCCEESSTTSCTTCCCCCCSEEEEEEETTTTEEEEE
T ss_pred             cEEEEEEcCCccccccCcccccccCCCcEeeECCCCcEEECCcccCccccCcccccCCcCCCCCEEEEEEECCCCEEEEE
Confidence            89999999999865456677889999999998877889998765322345533222456788999999999999999999


Q ss_pred             ECCeeeeeeeeecCCCceEEEEEeecCCeEEEEEEccCCCc
Q psy8037         195 VDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDL  235 (292)
Q Consensus       195 ~ng~~lg~aF~~~~~~~lyP~fs~~~~~~~v~l~~~~~~~~  235 (292)
                      +|++.++++|+++++++|||+|++.+++|+|+|+|.+++++
T Consensus       171 ~ng~~l~~aF~~~~~~~l~P~f~l~~g~~~v~l~~~~~~~~  211 (212)
T 2jk9_A          171 VDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLDP  211 (212)
T ss_dssp             ETTEEEEEEECCCTTCCBEEEEEECCTTCEEEEEEEEEEC-
T ss_pred             ECCEEeEEEeccCCCCEEeeEEEEEcCCcEEEEEECCCcCC
Confidence            99999999999999889999999988999999999999875
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A Back     alignment and structure
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 Back     alignment and structure
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} Back     alignment and structure
>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta} Back     alignment and structure
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B* Back     alignment and structure
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22 Back     alignment and structure
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens} Back     alignment and structure
>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens} Back     alignment and structure
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A Back     alignment and structure
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Back     alignment and structure
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A Back     alignment and structure
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A Back     alignment and structure
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 Back     alignment and structure
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster} Back     alignment and structure
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Back     alignment and structure
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 292
d2fnja1217 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophi 6e-82
d2afja1213 b.29.1.22 (A:12-224) SPRY domain-containing SOCS b 3e-67
d2fbea1188 b.29.1.22 (A:1-188) Similar to Ret finger protein- 2e-06
d2iwgb1179 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo 4e-04
>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 217 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: LD34464p
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  244 bits (623), Expect = 6e-82
 Identities = 162/199 (81%), Positives = 182/199 (91%)

Query: 36  RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVG 95
           +P R+DI+LDMPPASR+ Q+KH+WN EDRSLNIFVK+DDKLTFHRHPVAQSTDCIRG+VG
Sbjct: 3   KPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVG 62

Query: 96  FTKGFHIWEVHWSARQRGTHAVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHD 155
            TKG HIWE++W  RQRGTHAVVGV T DAPLHSVGYQSLVGS +QSWGWDLGRN+LYHD
Sbjct: 63  LTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQSLVGSTEQSWGWDLGRNKLYHD 122

Query: 156 SKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPI 215
           SKN  G+TYP +LK DE F+VPDKFLV LDMDEGTLSF+VD QYLG+AFRGL+G+KLYPI
Sbjct: 123 SKNCAGVTYPAILKNDEAFLVPDKFLVALDMDEGTLSFIVDQQYLGIAFRGLRGKKLYPI 182

Query: 216 VSAVWGHCEITMKYIGGLD 234
           VSAVWGHCEITM+YIGGLD
Sbjct: 183 VSAVWGHCEITMRYIGGLD 201
>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 213 Back     information, alignment and structure
>d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 188 Back     information, alignment and structure
>d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 9606]} Length = 179 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query292
d2fnja1217 LD34464p {Fruit fly (Drosophila melanogaster) [Tax 100.0
d2afja1213 SPRY domain-containing SOCS box protein 2 {Mouse ( 100.0
d2fbea1188 Similar to Ret finger protein-like 1 {Human (Homo 99.97
d2iwgb1179 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 96 99.97
d2fnja1217 LD34464p {Fruit fly (Drosophila melanogaster) [Tax 99.09
d2afja1213 SPRY domain-containing SOCS box protein 2 {Mouse ( 98.7
>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: LD34464p
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=3.2e-42  Score=300.69  Aligned_cols=200  Identities=81%  Similarity=1.416  Sum_probs=176.9

Q ss_pred             CCCChhhccCCCCCCccCccceeeccCCCCCcEEEccCCeEEEEeCCcccCcceEeeccCCcCCeEEEEEEEeeecCCce
Q psy8037          36 RPGRLDIILDMPPASRETQVKHAWNPEDRSLNIFVKDDDKLTFHRHPVAQSTDCIRGRVGFTKGFHIWEVHWSARQRGTH  115 (292)
Q Consensus        36 ~~~~~~~L~~~~~~~~~~~~~~t~dp~~~~~~l~lS~d~~~~~~~~p~~~~~~~Vlg~~gfssGkhYWEV~V~~~~~~~~  115 (292)
                      +|.|++.|+++|+...+.+..++|||++++.++.||+|+..+++++|..+++.+|||+.+|++|||||||+|.....+++
T Consensus         3 ~p~~~d~~~~~pp~~~~~~~~~~wn~~~~~~~~~ls~~~~~~~~~~~~~~~~~~vrgt~g~ssGk~YWEV~v~~~~~~~~   82 (217)
T d2fnja1           3 KPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTH   82 (217)
T ss_dssp             CCHHHHHHHHSCCCCHHHHHHTSEEEEEECTTEEEETTEEEEEEECCCTTEEEEEEESCCBCSSEEEEEEECCGGGCTTC
T ss_pred             CccccCeeecCCCCCccccccccCChhcCCCCEEEeCCCceEEEeCCccccCCeEEEcccccCCcEEEEEEEecCCCCCe
Confidence            46689999999999888889999999999999999977667888888888889999999999999999999987666678


Q ss_pred             eEEEEeeccccCCcCCcccccCCCCCeEEEEEcCCeEEecCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEE
Q psy8037         116 AVVGVGTIDAPLHSVGYQSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVV  195 (292)
Q Consensus       116 w~vGVa~~~~~l~~~g~~~~lG~~~~swg~~~~~g~~~h~~~~~~~~~y~~~~~~~~~~~~~d~IGV~LD~~~GtLsFy~  195 (292)
                      |+|||+++.+++++.++...+|.+..+|+|...++.++|++.......|+.....++.+..+|+|||+|||++|+|+||+
T Consensus        83 ~~IGV~~~~~~~~~~~~~~~~G~~~~s~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~gDvIGV~LD~d~gtLsF~k  162 (217)
T d2fnja1          83 AVVGVCTADAPLHSVGYQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFLVALDMDEGTLSFIV  162 (217)
T ss_dssp             CEEEEECTTSCSEEESSCCCTTSSTTEEEEETTTTEEEESTTTSCCEESSTTCCTTCCCCCCSEEEEEEETTTTEEEEEE
T ss_pred             eEEEEEecccCcccCCccccccCCCCcceEecCCCEEEecCCCccccccCcccccCCccCCCCEEEEEEeCCCCEEEEEE
Confidence            99999999999877777888999999999998888899988654445565554446788999999999999999999999


Q ss_pred             CCeeeeeeeeecCCCceEEEEEeecCCeEEEEEEccCCCc
Q psy8037         196 DGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDL  235 (292)
Q Consensus       196 ng~~lg~aF~~~~~~~lyP~fs~~~~~~~v~l~~~~~~~~  235 (292)
                      ||+++|+||+++.+++|||+|+..+++|+|+|+|.+++.+
T Consensus       163 NG~~lGvAf~~l~~~~lyP~vs~~~~~~~v~~~~~~~~~~  202 (217)
T d2fnja1         163 DQQYLGIAFRGLRGKKLYPIVSAVWGHCEITMRYIGGLDP  202 (217)
T ss_dssp             TTEEEEEEECCCTTCCBEEEEEECCTTCEEEEEEEEEECS
T ss_pred             CCEEeeEEEeCCCCCeEEEEEEeccCCcEEEEEEcCCcCC
Confidence            9999999999998889999999999999999999887653
>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure