Psyllid ID: psy8055


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
MDLFFYLNAENASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGIEITTMIYSVGYTLSLIALIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNFACVILYIFLHYCHLTNFFWMFVEGSR
cccccccccccEEEEcccccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccc
ccEEEccccccEEEcccccccccccccHHHHccccccccccHHHHHHHEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccc
MDLFFYLNAENASKWcnangswnsfanysLCTDIkkttqdlsepgieITTMIYSVGYTLSLIALIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNFACVILYIFLHYCHLTNFFWMFVEGSR
MDLFFYLNAENASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGIEITTMIYSVGYTLSLIALIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNFACVILYIFLHYCHLTNFFWMFVEGSR
MDLFFYLNAENASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGIEITTMIYSVGYTLSLIALIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNFACVILYIFLHYCHLTNFFWMFVEGSR
**LFFYLNAENASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGIEITTMIYSVGYTLSLIALIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNFACVILYIFLHYCHLTNFFWMFV****
MDLFFYLNAENASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGIEITTMIYSVGYTLSLIALIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNFACVILYIFLHYCHLTNFFWMFVEGSR
MDLFFYLNAENASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGIEITTMIYSVGYTLSLIALIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNFACVILYIFLHYCHLTNFFWMFVEGSR
MDLFFYLNAENASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGIEITTMIYSVGYTLSLIALIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNFACVILYIFLHYCHLTNFFWMFVEG**
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiii
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiii
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MDLFFYLNAENASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGIEITTMIYSVGYTLSLIALIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNFACVILYIFLHYCHLTNFFWMFVEGSR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query139 2.2.26 [Sep-21-2011]
Q16983 441 Diuretic hormone receptor N/A N/A 0.892 0.281 0.460 3e-30
P35464 395 Diuretic hormone receptor N/A N/A 0.906 0.318 0.463 4e-26
P35347 415 Corticotropin-releasing f yes N/A 0.942 0.315 0.4 2e-18
P35353 415 Corticotropin-releasing f yes N/A 0.942 0.315 0.392 2e-18
Q76LL8 415 Corticotropin-releasing f yes N/A 0.935 0.313 0.382 1e-17
Q13324 411 Corticotropin-releasing f no N/A 0.949 0.321 0.388 3e-17
Q60748 431 Corticotropin-releasing f no N/A 0.949 0.306 0.358 5e-17
P47866 411 Corticotropin-releasing f no N/A 0.949 0.321 0.365 6e-17
O62772 415 Corticotropin-releasing f N/A N/A 0.935 0.313 0.367 2e-16
O42603 413 Corticotropin-releasing f N/A N/A 0.942 0.317 0.373 3e-16
>sp|Q16983|DIHR_ACHDO Diuretic hormone receptor OS=Acheta domesticus PE=2 SV=1 Back     alignment and function desciption
 Score =  130 bits (326), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 87/128 (67%), Gaps = 4/128 (3%)

Query: 10  ENASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGIEITTMIYSVGYTLSLIALIIAVW 69
           +NA++ C +NG+W ++++Y  C ++ +   D           ++ VG+ LSL+A+ +A+W
Sbjct: 98  QNATRMCYSNGTWRNYSDYVHCRELVEAESDEDA----AMAFVFFVGFCLSLVAIAVAIW 153

Query: 70  IFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNFACVILYIFLHYCHLTN 129
           IF+YFKDLRCLRN IHTNLM TYI  D  WI++  VQ  V++   C +L + +HY +LTN
Sbjct: 154 IFLYFKDLRCLRNTIHTNLMATYICNDATWIISAVVQEYVENGGLCSVLAVLMHYFYLTN 213

Query: 130 FFWMFVEG 137
           FFWMFVEG
Sbjct: 214 FFWMFVEG 221




Receptor for the insect diurectic hormone. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.
Acheta domesticus (taxid: 6997)
>sp|P35464|DIHR_MANSE Diuretic hormone receptor OS=Manduca sexta PE=2 SV=1 Back     alignment and function description
>sp|P35347|CRFR1_MOUSE Corticotropin-releasing factor receptor 1 OS=Mus musculus GN=Crhr1 PE=2 SV=1 Back     alignment and function description
>sp|P35353|CRFR1_RAT Corticotropin-releasing factor receptor 1 OS=Rattus norvegicus GN=Crhr1 PE=1 SV=1 Back     alignment and function description
>sp|Q76LL8|CRFR1_MACMU Corticotropin-releasing factor receptor 1 OS=Macaca mulatta GN=CRHR1 PE=2 SV=1 Back     alignment and function description
>sp|Q13324|CRFR2_HUMAN Corticotropin-releasing factor receptor 2 OS=Homo sapiens GN=CRHR2 PE=1 SV=2 Back     alignment and function description
>sp|Q60748|CRFR2_MOUSE Corticotropin-releasing factor receptor 2 OS=Mus musculus GN=Crhr2 PE=1 SV=1 Back     alignment and function description
>sp|P47866|CRFR2_RAT Corticotropin-releasing factor receptor 2 OS=Rattus norvegicus GN=Crhr2 PE=2 SV=1 Back     alignment and function description
>sp|O62772|CRFR1_SHEEP Corticotropin-releasing factor receptor 1 OS=Ovis aries GN=CRHR1 PE=2 SV=1 Back     alignment and function description
>sp|O42603|CRFR2_XENLA Corticotropin-releasing factor receptor 2 OS=Xenopus laevis GN=crhr2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query139
52537980 641 putative diuretic hormone receptor II [N 0.906 0.196 0.671 2e-44
52538141 631 putative diuretic hormone receptor I [Ni 0.906 0.199 0.664 4e-43
270006355 423 hypothetical protein TcasGA2_TC007104 [T 0.920 0.302 0.571 5e-37
189236770 420 PREDICTED: similar to putative diuretic 0.920 0.304 0.571 6e-37
383857008 462 PREDICTED: diuretic hormone receptor-lik 0.928 0.279 0.567 2e-33
345493894 430 PREDICTED: diuretic hormone receptor-lik 0.920 0.297 0.519 3e-33
242007376 522 class B secretin-like G-protein coupled 0.942 0.250 0.518 5e-33
345493896 507 PREDICTED: diuretic hormone receptor-lik 0.920 0.252 0.519 6e-33
328713038 405 PREDICTED: diuretic hormone receptor-lik 0.949 0.325 0.556 4e-32
321462048 427 putative diuretic hormone 44 receptor [D 0.949 0.309 0.503 5e-32
>gi|52537980|emb|CAG25576.1| putative diuretic hormone receptor II [Nilaparvata lugens] Back     alignment and taxonomy information
 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/128 (67%), Positives = 105/128 (82%), Gaps = 2/128 (1%)

Query: 11  NASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGIEITTMIYSVGYTLSLIALIIAVWI 70
           NA++ C  NG+W+++ +Y+ C D+     DL EPGIE+TTMIYS GY LSLIAL++AV I
Sbjct: 221 NATRRCLLNGTWDNYTDYTSCKDLSPDQPDL-EPGIEVTTMIYSAGYALSLIALVLAVSI 279

Query: 71  FVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNF-ACVILYIFLHYCHLTN 129
           F+YFKDLRCLRN IHTNLMCTYI+ADFMWIL +TVQMS+ +N  ACVIL + LHY +LTN
Sbjct: 280 FLYFKDLRCLRNTIHTNLMCTYIMADFMWILNITVQMSMPTNVSACVILVVLLHYFYLTN 339

Query: 130 FFWMFVEG 137
           FFWMFVEG
Sbjct: 340 FFWMFVEG 347




Source: Nilaparvata lugens

Species: Nilaparvata lugens

Genus: Nilaparvata

Family: Delphacidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|52538141|emb|CAG25575.2| putative diuretic hormone receptor I [Nilaparvata lugens] Back     alignment and taxonomy information
>gi|270006355|gb|EFA02803.1| hypothetical protein TcasGA2_TC007104 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|189236770|ref|XP_975416.2| PREDICTED: similar to putative diuretic hormone receptor II [Tribolium castaneum] Back     alignment and taxonomy information
>gi|383857008|ref|XP_003703998.1| PREDICTED: diuretic hormone receptor-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|345493894|ref|XP_003427176.1| PREDICTED: diuretic hormone receptor-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|242007376|ref|XP_002424517.1| class B secretin-like G-protein coupled receptor GPRdih1, putative [Pediculus humanus corporis] gi|212507935|gb|EEB11779.1| class B secretin-like G-protein coupled receptor GPRdih1, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|345493896|ref|XP_001606711.2| PREDICTED: diuretic hormone receptor-like isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|328713038|ref|XP_003244979.1| PREDICTED: diuretic hormone receptor-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|321462048|gb|EFX73074.1| putative diuretic hormone 44 receptor [Daphnia pulex] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query139
FB|FBgn0033932 504 Dh44-R1 "Diuretic hormone 44 r 0.942 0.259 0.451 6.6e-31
FB|FBgn0033744 476 Dh44-R2 "Diuretic hormone 44 r 0.942 0.275 0.445 1.7e-27
MGI|MGI:88498 415 Crhr1 "corticotropin releasing 0.942 0.315 0.4 9.1e-21
RGD|61276 415 Crhr1 "corticotropin releasing 0.942 0.315 0.392 1.2e-20
UNIPROTKB|F1LY32 415 Crhr1 "Corticotropin-releasing 0.942 0.315 0.392 1.2e-20
UNIPROTKB|E2R9A7 415 CRHR1 "Uncharacterized protein 0.942 0.315 0.377 7.3e-20
UNIPROTKB|F1PZC5 415 CRHR1 "Uncharacterized protein 0.942 0.315 0.377 7.3e-20
UNIPROTKB|F8WA81 370 CRHR2 "Corticotropin-releasing 0.949 0.356 0.388 8.2e-20
UNIPROTKB|Q13324 411 CRHR2 "Corticotropin-releasing 0.949 0.321 0.388 1.5e-19
UNIPROTKB|F1RRS6 415 CRHR1 "Uncharacterized protein 0.942 0.315 0.370 2.1e-19
FB|FBgn0033932 Dh44-R1 "Diuretic hormone 44 receptor 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 341 (125.1 bits), Expect = 6.6e-31, P = 6.6e-31
 Identities = 61/135 (45%), Positives = 94/135 (69%)

Query:     6 YLNAENASKWCNANGSWNSFANYSLCTDIK--KTTQDLSEPGIEITTMIYSVGYTLSLIA 63
             Y +++NA+++C+ANG+W  + NY  C  +   ++  +  E  +E+ T+IY +GYTLSL++
Sbjct:    85 YDSSKNATRFCHANGTWEKYTNYDACAHLPAPESVPEF-EVIVELPTIIYYIGYTLSLVS 143

Query:    64 LIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWILTMTVQMSVQSNF-ACVILYIFL 122
             L +A+ +F YFK+LRCLRN IH NL  TYI++   WIL ++VQ+S++S   +C+ L    
Sbjct:   144 LSLALIVFAYFKELRCLRNTIHANLFFTYIMSALFWILLLSVQISIRSGVGSCIALITLF 203

Query:   123 HYCHLTNFFWMFVEG 137
             H+  LTNFFWM VEG
Sbjct:   204 HFFTLTNFFWMLVEG 218




GO:0016021 "integral to membrane" evidence=IEA;ISS
GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;ISS
GO:0008036 "diuretic hormone receptor activity" evidence=ISS;IDA
GO:0005184 "neuropeptide hormone activity" evidence=NAS
GO:0008188 "neuropeptide receptor activity" evidence=ISS
GO:0004948 "calcitonin receptor activity" evidence=ISS
GO:0004930 "G-protein coupled receptor activity" evidence=IEA
FB|FBgn0033744 Dh44-R2 "Diuretic hormone 44 receptor 2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:88498 Crhr1 "corticotropin releasing hormone receptor 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|61276 Crhr1 "corticotropin releasing hormone receptor 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LY32 Crhr1 "Corticotropin-releasing factor receptor 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2R9A7 CRHR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PZC5 CRHR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F8WA81 CRHR2 "Corticotropin-releasing factor receptor 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q13324 CRHR2 "Corticotropin-releasing factor receptor 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RRS6 CRHR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query139
pfam00002 239 pfam00002, 7tm_2, 7 transmembrane receptor (Secret 9e-28
>gnl|CDD|215647 pfam00002, 7tm_2, 7 transmembrane receptor (Secretin family) Back     alignment and domain information
 Score =  101 bits (255), Expect = 9e-28
 Identities = 42/89 (47%), Positives = 62/89 (69%), Gaps = 1/89 (1%)

Query: 50  TMIYSVGYTLSLIALIIAVWIFVYFKDLRCLRNKIHTNLMCTYILADFMWIL-TMTVQMS 108
            +IY+VGY+LSL+AL++A+ IF+ F+ LRC RN IH NL  ++IL   ++++    +  S
Sbjct: 5   KVIYTVGYSLSLVALLLAIAIFLLFRKLRCTRNYIHLNLFASFILRAILFLVGDAVLFNS 64

Query: 109 VQSNFACVILYIFLHYCHLTNFFWMFVEG 137
           V S+  C ++ +FLHY  L NFFWM VEG
Sbjct: 65  VGSDVVCKVVAVFLHYFFLANFFWMLVEG 93


This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs).They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognised. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97 ; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteristic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling. Length = 239

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 139
KOG4564|consensus 473 99.98
KOG4193|consensus 610 99.9
PF00002 242 7tm_2: 7 transmembrane receptor (Secretin family); 99.76
KOG4289|consensus 2531 99.65
PF05462 303 Dicty_CAR: Slime mold cyclic AMP receptor 98.61
PF11710 201 Git3: G protein-coupled glucose receptor regulatin 97.8
PF0279366 HRM: Hormone receptor domain; InterPro: IPR001879 97.64
smart0000870 HormR Domain present in hormone receptors. 96.99
PF01534 328 Frizzled: Frizzled/Smoothened family membrane regi 96.9
PF02101 405 Ocular_alb: Ocular albinism type 1 protein; InterP 88.21
>KOG4564|consensus Back     alignment and domain information
Probab=99.98  E-value=2.7e-32  Score=228.45  Aligned_cols=134  Identities=38%  Similarity=0.812  Sum_probs=115.6

Q ss_pred             cCCCCceeeeCCCCCcccC------CCCccccccCCCCccc-C-CcchhhhhHHhhhhhhHhHHHHHHHHHHHHHHhhhc
Q psy8055           6 YLNAENASKWCNANGSWNS------FANYSLCTDIKKTTQD-L-SEPGIEITTMIYSVGYTLSLIALIIAVWIFVYFKDL   77 (139)
Q Consensus         6 ~~~~~~~~r~C~~~G~W~~------~~~yt~C~~~~~~~~~-~-~~~~~~~l~~i~~vG~~lSl~~L~~tii~~~~~r~l   77 (139)
                      ++++++++|.|++||+|+.      |+|||+|..+.+.... . .+.....+++++++|+++|+++|++|+++|..||++
T Consensus        96 ~~~~~~v~R~C~~~G~W~~~~~~~~W~nyt~C~~~~~~~~~~~~~~~~~~~~~~lytvGyslSl~sL~vAl~If~~FR~L  175 (473)
T KOG4564|consen   96 YSTSGNVTRNCTSNGTWSERPPSRTWTNYTACGKNEEEEERQLDREYFLELLKILYTVGYSLSLVSLLVALIIFLYFRSL  175 (473)
T ss_pred             ccCCCceEeecCCCCccCCCCCcCCCCCchhccCcchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            3499999999999999973      6999999998655422 1 245566678999999999999999999999999999


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHhhhhhcc---------------cCC-chhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy8055          78 RCLRNKIHTNLMCTYILADFMWILTMTVQMSV---------------QSN-FACVILYIFLHYCHLTNFFWMFVEGSR  139 (139)
Q Consensus        78 r~~~~~Ih~nL~~slll~~l~fli~~~~~~~~---------------~~~-~~C~~~a~~lhy~~la~f~Wmlveg~~  139 (139)
                      ||+|++||+||++|++++.+..++.+.....+               .++ .+|+++.+++|||.+++|+||++||+|
T Consensus       176 ~CtRn~IH~nLF~SfiLra~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ck~~~~~~~Yf~~aNf~WmlvEGlY  253 (473)
T KOG4564|consen  176 HCTRNYIHMNLFASFILRAASVLIKDLVLVVNGEQDASSDTSLHCLISSNPVGCKLLFVFFQYFVLANFFWMLVEGLY  253 (473)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998754322               022 299999999999999999999999986



>KOG4193|consensus Back     alignment and domain information
>PF00002 7tm_2: 7 transmembrane receptor (Secretin family); InterPro: IPR000832 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>KOG4289|consensus Back     alignment and domain information
>PF05462 Dicty_CAR: Slime mold cyclic AMP receptor Back     alignment and domain information
>PF11710 Git3: G protein-coupled glucose receptor regulating Gpa2; InterPro: IPR023041 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor Back     alignment and domain information
>PF02793 HRM: Hormone receptor domain; InterPro: IPR001879 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>smart00008 HormR Domain present in hormone receptors Back     alignment and domain information
>PF01534 Frizzled: Frizzled/Smoothened family membrane region; InterPro: IPR000539 The frizzled (fz) locus of Drosophila coordinates the cytoskeletons of epidermal cells, producing a parallel array of cuticular hairs and bristles [, ] Back     alignment and domain information
>PF02101 Ocular_alb: Ocular albinism type 1 protein; InterPro: IPR001414 Ocular albinism type 1 (OA1) is an X-linked disorder characterised by severe impairment of visual acuity, retinal hypopigmentation and the presence of macromelanosomes Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query139
2qkh_A135 Glucose-dependent insulinotropic polypeptide recep 5e-06
1u34_A119 CRFR2B, corticotropin releasing factor receptor 2; 4e-05
2l27_A84 Seven transmembrane helix receptor; CRF, ECD1, fam 6e-05
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens} Length = 135 Back     alignment and structure
 Score = 42.4 bits (99), Expect = 5e-06
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 4   FFYLNAENASKWCNANGSWNSFANYSLCTDIKKTTQDLSEPGI 46
             ++ A    + C ++G W  + +++ C + +K    L +  I
Sbjct: 88  HHHVAAGFVLRQCGSDGQWGLWRDHTQCENPEKNEAFLDQRLI 130


>1u34_A CRFR2B, corticotropin releasing factor receptor 2; beta sheets and loops, signaling protein; NMR {Mus musculus} SCOP: g.76.1.1 PDB: 2jnd_A* 2jnc_A Length = 119 Back     alignment and structure
>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens} Length = 84 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query139
1u34_A119 CRFR2B, corticotropin releasing factor receptor 2; 98.3
2l27_A84 Seven transmembrane helix receptor; CRF, ECD1, fam 98.03
4ers_A96 GL-R, glucagon receptor; class-B GPCR, FAB, glycos 97.99
2qkh_A135 Glucose-dependent insulinotropic polypeptide recep 97.82
3c5t_A122 Glucagon-like peptide 1 receptor; ligand-bound G p 97.73
3h3g_A539 Fusion protein of maltose-binding periplasmic DOM 97.46
2xdg_A92 Growth hormone-releasing hormone receptor; signali 96.64
2x57_A116 Vasoactive intestinal polypeptide receptor 2; G-pr 96.53
2jod_A106 Pituitary adenylate cyclase-activating polypeptide 96.28
3n7s_A115 Calcitonin gene-related peptide type 1 receptor; G 96.24
2z73_A 448 Rhodopsin; visual pigment, GQ-type, G-protein coup 90.94
3rze_A 452 Histamine H1 receptor, lysozyme chimera; structura 89.58
3eml_A 488 Human adenosine A2A receptor/T4 lysozyme chimera; 88.19
4dkl_A 464 MU-type opioid receptor, lysozyme chimera; G-prote 87.37
3uon_A 467 Human M2 muscarinic acetylcholine, receptor T4 LY 86.08
2rh1_A 500 Beta-2-adrenergic receptor/T4-lysozyme chimera; GP 85.51
3vw7_A 484 Proteinase-activated receptor 1, lysozyme; high re 85.22
3sn6_R 514 Lysozyme, beta-2 adrenergic receptor; seven transm 84.96
4amj_A 315 Beta-1 adrenergic receptor; membrane protein, 7TMR 82.84
4ea3_A 434 Fusion protein of nociceptin receptor and cytochr; 82.79
1u19_A 349 Rhodopsin; G protein-coupled receptor, membrane pr 82.16
4eiy_A 447 Adenosine receptor A2A/soluble cytochrome B562 CH; 80.85
>1u34_A CRFR2B, corticotropin releasing factor receptor 2; beta sheets and loops, signaling protein; NMR {Mus musculus} SCOP: g.76.1.1 PDB: 2jnd_A* 2jnc_A Back     alignment and structure
Probab=98.30  E-value=4.2e-07  Score=63.17  Aligned_cols=36  Identities=39%  Similarity=0.617  Sum_probs=31.3

Q ss_pred             ccCCCCceeeeCCCCCcccCCCCccccccCCCCccc
Q psy8055           5 FYLNAENASKWCNANGSWNSFANYSLCTDIKKTTQD   40 (139)
Q Consensus         5 ~~~~~~~~~r~C~~~G~W~~~~~yt~C~~~~~~~~~   40 (139)
                      .||+.++++|.|++||+|+.|.||+.|.-..+..++
T Consensus        78 ~~~~~g~vsR~C~~nG~W~~~~nys~C~~~~~~~~~  113 (119)
T 1u34_A           78 KYNTTRNAYRECLENGTWASRVNYSHCEPILDDKQR  113 (119)
T ss_dssp             CCCCCCCCCCBCCTTSCCCSCCCCCSSSCCSSCCCC
T ss_pred             ccCCCCeeecCCCCCCcCCCCCChhHhcCccccccc
Confidence            389999999999999999999999999987665433



>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens} Back     alignment and structure
>4ers_A GL-R, glucagon receptor; class-B GPCR, FAB, glycosylation, extra-C immune system; HET: NAG; 2.64A {Homo sapiens} Back     alignment and structure
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens} Back     alignment and structure
>3c5t_A Glucagon-like peptide 1 receptor; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} PDB: 3c59_A* 3iol_A* Back     alignment and structure
>3h3g_A Fusion protein of maltose-binding periplasmic DOM human parathyroid hormone receptor...; GPCR, extracellular domain, PTHRP, PTH, PThr1, sugar transpo transport, membrane protein; HET: MAL; 1.94A {Escherichia coli} PDB: 3c4m_A* 3l2j_A* Back     alignment and structure
>2xdg_A Growth hormone-releasing hormone receptor; signaling protein, membrane protein; 1.95A {Homo sapiens} Back     alignment and structure
>2x57_A Vasoactive intestinal polypeptide receptor 2; G-protein coupled receptor, circadian rhythm, MALE reproduct hormone binding, growth, transducer; 2.10A {Homo sapiens} Back     alignment and structure
>2jod_A Pituitary adenylate cyclase-activating polypeptide type I receptor; protein/peptide complex, signaling protein; NMR {Homo sapiens} SCOP: g.76.1.1 Back     alignment and structure
>3n7s_A Calcitonin gene-related peptide type 1 receptor; GPCR, class B GPCR, antagonist, olcegepant, telcagepant, MIG membrane protein; HET: 3N6 3N7; 2.10A {Homo sapiens} PDB: 3n7r_A* 3n7p_A* 3aqf_B Back     alignment and structure
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A* Back     alignment and structure
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens} Back     alignment and structure
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A* Back     alignment and structure
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A* Back     alignment and structure
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A* Back     alignment and structure
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A* Back     alignment and structure
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens} Back     alignment and structure
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A* Back     alignment and structure
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A* Back     alignment and structure
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ... Back     alignment and structure
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 139
d1u34a_119 g.76.1.1 (A:) Corticotropin releasing factor recep 4e-05
>d1u34a_ g.76.1.1 (A:) Corticotropin releasing factor receptor 2, CRFR-2beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 119 Back     information, alignment and structure

class: Small proteins
fold: Hormone receptor domain
superfamily: Hormone receptor domain
family: Hormone receptor domain
domain: Corticotropin releasing factor receptor 2, CRFR-2beta
species: Mouse (Mus musculus) [TaxId: 10090]
 Score = 38.4 bits (89), Expect = 4e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 4   FFYLNAENASKWCNANGSWNSFANYSLCTDI 34
             Y    NA + C  NG+W S  NYS C  I
Sbjct: 77  IKYNTTRNAYRECLENGTWASRVNYSHCEPI 107


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query139
d1u34a_119 Corticotropin releasing factor receptor 2, CRFR-2b 98.5
d1u19a_ 348 Rhodopsin {Cow (Bos taurus) [TaxId: 9913]} 95.6
d2joda1106 Pituitary adenylate cyclase-activating polypeptide 94.57
d1zjka253 Complement C1R protease domains {Human (Homo sapie 86.76
d1quba460 beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 81.81
d2o39c162 CD46 (membrane cofactor protein, MCP) {Human (Homo 81.49
d1quba363 beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 80.66
d1elva268 Complement C1S protease domain {Human (Homo sapien 80.13
>d1u34a_ g.76.1.1 (A:) Corticotropin releasing factor receptor 2, CRFR-2beta {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Small proteins
fold: Hormone receptor domain
superfamily: Hormone receptor domain
family: Hormone receptor domain
domain: Corticotropin releasing factor receptor 2, CRFR-2beta
species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.50  E-value=3.1e-08  Score=67.12  Aligned_cols=35  Identities=37%  Similarity=0.621  Sum_probs=30.9

Q ss_pred             cccCCCCceeeeCCCCCcccCCCCccccccCCCCc
Q psy8055           4 FFYLNAENASKWCNANGSWNSFANYSLCTDIKKTT   38 (139)
Q Consensus         4 ~~~~~~~~~~r~C~~~G~W~~~~~yt~C~~~~~~~   38 (139)
                      ++||+.++|+|.|++||+|.+|+|||.|....+..
T Consensus        77 ~~~~~~~~a~R~C~~nG~W~~~sNYt~C~~~~~~~  111 (119)
T d1u34a_          77 IKYNTTRNAYRECLENGTWASRVNYSHCEPILDDK  111 (119)
T ss_dssp             SCCCCCCCCCCBCCTTSCCCSCCCCCSSSCCSSCC
T ss_pred             ccccccceEEEecCCCccCCCcCCchhcccccccc
Confidence            46899999999999999999999999998765543



>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2joda1 g.76.1.1 (A:17-122) Pituitary adenylate cyclase-activating polypeptide type I receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zjka2 g.18.1.1 (A:311-363) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1quba4 g.18.1.1 (A:184-243) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2o39c1 g.18.1.1 (C:1-62) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1quba3 g.18.1.1 (A:121-183) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1elva2 g.18.1.1 (A:342-409) Complement C1S protease domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure