Psyllid ID: psy8209

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIAGVALGVALSQVRYTW
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHcHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccccHHHccccHHHHccccccHcccccccccccEEEcccccccccccccccccccccccHHcccEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mhnrykrsnftyvsPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQccglssegymdwskneyfncsspsvekcgvpfsccinatdiTSGLVNIMCGygaqqssgvlrygqlpqVAEASKKVWTSGCIEVMRLWAERNLYTIAGVALGVALSQVRYTW
Flexible Loop (DISEMBL)
mhnrykrsnftyVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIAGVALGVALSQVRYTW
Low Complexity Region (SEG)
MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDvilnialvlvilgaiifivSFAGCVGALRENTCLLKfyslclliffllemlVAVIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIAGVALGVALSQVRYTW
Disordered region (IsUnstruct)
********NFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIAGVALGVALSQVRY**
Disordered Region (DISOPRED)
***********YVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKII***RDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIAGVALGVALSQVRYTW
Disordered Region (DISEMBL)
MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIAGVALGVALSQVRYTW
Disordered Region (DISPRO)
*********FTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIAGVALGVALSQVRYTW
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIAGVALGVALSQVRYTW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	269	2.2.26 [Sep-21-2011]
Q3SYV5	283	Tetraspanin-33 OS=Bos tau	yes	N/A	0.881	0.837	0.442	6e-58
Q8R3S2	283	Tetraspanin-33 OS=Mus mus	yes	N/A	0.881	0.837	0.434	1e-56
Q86UF1	283	Tetraspanin-33 OS=Homo sa	yes	N/A	0.873	0.830	0.430	3e-56
Q5RH71	281	Tetraspanin-33 OS=Danio r	yes	N/A	0.877	0.839	0.438	2e-55
Q6GQF5	268	Tetraspanin-33 OS=Xenopus	N/A	N/A	0.903	0.906	0.408	4e-54
Q68VK5	268	Tetraspanin-5 OS=Rattus n	no	N/A	0.869	0.873	0.424	2e-47
P62080	268	Tetraspanin-5 OS=Mus musc	no	N/A	0.869	0.873	0.424	2e-47
P62079	268	Tetraspanin-5 OS=Homo sap	no	N/A	0.869	0.873	0.424	2e-47
Q17QJ5	268	Tetraspanin-5 OS=Bos taur	no	N/A	0.869	0.873	0.424	2e-47
Q9D7W4	270	Tetraspanin-17 OS=Mus mus	no	N/A	0.921	0.918	0.393	8e-47

>sp|Q3SYV5|TSN33_BOVIN Tetraspanin-33 OS=Bos taurus GN=TSPAN33 PE=2 SV=1

 Score =  224 bits (571), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 115/260 (44%), Positives = 170/260 (65%), Gaps = 23/260 (8%)

Query: 8   SNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIAL 67
            +F++VSP VKY++F  N +FW++  +++AVG+YA L K E + L  L       ++ A+
Sbjct: 13  EDFSFVSPLVKYLLFFFNMLFWVISMVMVAVGVYARLMKHEEAALACLA------VDPAI 66

Query: 68  VLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATL 127
           +L+++G ++F+++F GC+G+LREN CLL+ +SLCL + FLL++   V+GFVF   ++  +
Sbjct: 67  LLIVVGILMFLLTFCGCIGSLRENICLLQTFSLCLTVVFLLQLAAGVLGFVFSDKVRGKV 126

Query: 128 EESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCS--SPSVEKC 185
            E     I+H YRDD DLQNLIDF Q+EF CCG  S  Y DWS N YFNCS  +PS E+C
Sbjct: 127 SEIINNAIVH-YRDDLDLQNLIDFGQKEFSCCGGIS--YKDWSLNMYFNCSEDNPSRERC 183

Query: 186 GVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLW 245
            VP+SCC+   +    ++N MCG G Q     L Y       EASK ++T+GCI+ +  W
Sbjct: 184 SVPYSCCLPTPN--QAVINTMCGQGMQ----ALDY------LEASKVIYTNGCIDRLVNW 231

Query: 246 AERNLYTIAGVALGVALSQV 265
              NL+ + GVALG+A+ Q+
Sbjct: 232 IHSNLFVLGGVALGLAIPQL 251

Plays an important role in normal erythropoiesis. It has a role in the differentiation of erythroid progenitors.
Bos taurus (taxid: 9913)

>sp|Q8R3S2|TSN33_MOUSE Tetraspanin-33 OS=Mus musculus GN=Tspan33 PE=1 SV=1

 Score =  219 bits (559), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 113/260 (43%), Positives = 168/260 (64%), Gaps = 23/260 (8%)

Query: 8   SNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIAL 67
             F++VSP VKY++F  N +FW++  +++AVG+YA L K   + L  L       ++ A+
Sbjct: 13  DEFSFVSPLVKYLLFFFNMLFWVISMVMVAVGVYARLMKHAEAALACLA------VDPAI 66

Query: 68  VLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATL 127
           +L+++G ++F+++F GC+G+LREN CLL+ +SLCL I FLL++   ++GFVF    +  +
Sbjct: 67  LLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCLTIVFLLQLAAGILGFVFSDKARGKV 126

Query: 128 EESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCS--SPSVEKC 185
            E     I+H YRDD DLQNLIDF Q++F CCG  S  Y DWS+N YFNCS  +PS E+C
Sbjct: 127 SEIINNAIVH-YRDDLDLQNLIDFGQKKFSCCGGIS--YRDWSQNMYFNCSEDNPSRERC 183

Query: 186 GVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLW 245
            VP+SCC+   +    ++N MCG G Q     L Y       EASK ++T+GCI+ +  W
Sbjct: 184 SVPYSCCLPTPN--QAVINTMCGQGMQ----ALDY------LEASKVIYTNGCIDKLVNW 231

Query: 246 AERNLYTIAGVALGVALSQV 265
              NL+ + GVALG+A+ Q+
Sbjct: 232 IHSNLFLLGGVALGLAIPQL 251

Plays an important role in normal erythropoiesis. It has a role in the differentiation of erythroid progenitors.

Mus musculus (taxid: 10090)

>sp|Q86UF1|TSN33_HUMAN Tetraspanin-33 OS=Homo sapiens GN=TSPAN33 PE=2 SV=1

 Score =  218 bits (556), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 111/258 (43%), Positives = 166/258 (64%), Gaps = 23/258 (8%)

Query: 10  FTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVL 69
           F++VSP VKY++F  N +FW++  +++AVG+YA L K   + L  L       ++ A++L
Sbjct: 15  FSFVSPLVKYLLFFFNMLFWVISMVMVAVGVYARLMKHAEAALACLA------VDPAILL 68

Query: 70  VILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEE 129
           +++G ++F+++F GC+G+LREN CLL+ +SLCL   FLL++   ++GFVF    +  + E
Sbjct: 69  IVVGVLMFLLTFCGCIGSLRENICLLQTFSLCLTAVFLLQLAAGILGFVFSDKARGKVSE 128

Query: 130 SFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCS--SPSVEKCGV 187
                I+H YRDD DLQNLIDF Q++F CCG  S  Y DWS+N YFNCS  +PS E+C V
Sbjct: 129 IINNAIVH-YRDDLDLQNLIDFGQKKFSCCGGIS--YKDWSQNMYFNCSEDNPSRERCSV 185

Query: 188 PFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAE 247
           P+SCC+   D    ++N MCG G Q    +          EASK ++T+GCI+ +  W  
Sbjct: 186 PYSCCLPTPD--QAVINTMCGQGMQAFDYL----------EASKVIYTNGCIDKLVNWIH 233

Query: 248 RNLYTIAGVALGVALSQV 265
            NL+ + GVALG+A+ Q+
Sbjct: 234 SNLFLLGGVALGLAIPQL 251

Plays an important role in normal erythropoiesis. It has a role in the differentiation of erythroid progenitors.

Homo sapiens (taxid: 9606)

>sp|Q5RH71|TSN33_DANRE Tetraspanin-33 OS=Danio rerio GN=tspan33 PE=2 SV=1

 Score =  215 bits (548), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 114/260 (43%), Positives = 170/260 (65%), Gaps = 24/260 (9%)

Query: 8   SNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIAL 67
            ++T+VSP VKY++F  N IFW++  +LI++G+Y+ + K E +  L   TV     + AL
Sbjct: 12  EDYTFVSPVVKYLLFFFNMIFWIISLVLISIGVYSRIVKHETA--LACLTV-----DPAL 64

Query: 68  VLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATL 127
           +L+++G ++F ++F GCVG+LREN CLL+ + + L I FLL++L  V+GFVF    +  +
Sbjct: 65  ILMVVGILMFFITFCGCVGSLRENICLLQTFCIFLTIMFLLQLLAGVLGFVFSDKARGKV 124

Query: 128 EESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCS--SPSVEKC 185
            + F   I H YRDD DLQNLID+ Q++F CCG  S  +MDWSKN YFNCS  +PS E+C
Sbjct: 125 TDMFDNAIKH-YRDDLDLQNLIDYGQKQFNCCGGIS--FMDWSKNMYFNCSDDNPSRERC 181

Query: 186 GVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLW 245
            VPFSCC++A + T  ++N MCG+G Q     L Y        AS  + T+GCI+++  W
Sbjct: 182 SVPFSCCLHAKEET--IINTMCGHGMQ----ALNY------LAASAFINTNGCIDILVNW 229

Query: 246 AERNLYTIAGVALGVALSQV 265
              NL+ + G+ALG+ + Q+
Sbjct: 230 IHSNLFLLGGIALGLTIPQL 249

Danio rerio (taxid: 7955)

>sp|Q6GQF5|TSN33_XENLA Tetraspanin-33 OS=Xenopus laevis GN=tspan33 PE=2 SV=1

 Score =  211 bits (538), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 112/274 (40%), Positives = 170/274 (62%), Gaps = 31/274 (11%)

Query: 6   KRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNI 65
           K  +FT++SP VKY++   N +FW++  +++ +G+YA L K   + +  L       ++ 
Sbjct: 10  KEEDFTFISPVVKYLLIFFNMLFWVISMVMVGIGVYARLLKHAEAAMACLA------VDP 63

Query: 66  ALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQA 125
           AL+L+ +G ++F+++F GC+G+LREN CLL+ +S+CL + FLL++ V ++GF+F    + 
Sbjct: 64  ALLLIGVGILMFLITFCGCIGSLRENICLLQTFSICLTLVFLLQLAVGIVGFIFSDKARG 123

Query: 126 TLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP--SVE 183
            + E  +  I H YRDD DLQNLIDF Q+EF CCG  S  Y DWS+N YFNCSS   S E
Sbjct: 124 KVSEIISNAIEH-YRDDLDLQNLIDFGQKEFSCCGGIS--YKDWSQNMYFNCSSENRSQE 180

Query: 184 KCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMR 243
           +C VP+SCC++  D    ++N +CG G Q+    L Y       EA + + T+GCI+ + 
Sbjct: 181 RCSVPYSCCLH--DEGEAVINTLCGQGMQE----LDY------LEAGEFIHTNGCIDRLV 228

Query: 244 LWAERNLYTIAGVALGVALSQVR--------YTW 269
            W   NL+ + GVALG+A+ QV         YTW
Sbjct: 229 NWIHSNLFLLGGVALGLAIPQVTKHLRAKLIYTW 262

Xenopus laevis (taxid: 8355)

>sp|Q68VK5|TSN5_RAT Tetraspanin-5 OS=Rattus norvegicus GN=Tspan5 PE=2 SV=2

 Score =  189 bits (480), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/257 (42%), Positives = 152/257 (59%), Gaps = 23/257 (8%)

Query: 13  VSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLL-KLETVYDVI-LNIALVLV 70
           VS C+KY IF  N IFW LG   + +GL+A    W   G+L  + ++ D+   +   + +
Sbjct: 11  VSCCIKYFIFGFNVIFWFLGITFLGIGLWA----WNEKGVLSNISSITDLGGFDPVWLFL 66

Query: 71  ILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEES 130
           ++G ++FI+ FAGC+GALRENT LLKF+S+ L I F LE+   V+ FVF   I+  L   
Sbjct: 67  VVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQL-YF 125

Query: 131 FTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNC--SSPSVEKCGVP 188
           F    I  YRDD DLQNLIDF Q+ +QCCG  + G  DW+ N YFNC  S+ S E+CGVP
Sbjct: 126 FINNNIRAYRDDIDLQNLIDFTQEYWQCCG--AFGADDWNLNIYFNCTDSNASRERCGVP 183

Query: 189 FSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAER 248
           FSCC    D    ++N  CGY A+Q          P+V +    ++T GC+     W + 
Sbjct: 184 FSCC--TKDPAEDVINTQCGYDARQK---------PEV-DQQIVIYTKGCVPQFEKWLQD 231

Query: 249 NLYTIAGVALGVALSQV 265
           NL  +AG+ +G+AL Q+
Sbjct: 232 NLTIVAGIFIGIALLQI 248

Rattus norvegicus (taxid: 10116)

>sp|P62080|TSN5_MOUSE Tetraspanin-5 OS=Mus musculus GN=Tspan5 PE=2 SV=1

 Score =  189 bits (480), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/257 (42%), Positives = 152/257 (59%), Gaps = 23/257 (8%)

Query: 13  VSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLL-KLETVYDVI-LNIALVLV 70
           VS C+KY IF  N IFW LG   + +GL+A    W   G+L  + ++ D+   +   + +
Sbjct: 11  VSCCIKYFIFGFNVIFWFLGITFLGIGLWA----WNEKGVLSNISSITDLGGFDPVWLFL 66

Query: 71  ILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEES 130
           ++G ++FI+ FAGC+GALRENT LLKF+S+ L I F LE+   V+ FVF   I+  L   
Sbjct: 67  VVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQL-YF 125

Query: 131 FTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNC--SSPSVEKCGVP 188
           F    I  YRDD DLQNLIDF Q+ +QCCG  + G  DW+ N YFNC  S+ S E+CGVP
Sbjct: 126 FINNNIRAYRDDIDLQNLIDFTQEYWQCCG--AFGADDWNLNIYFNCTDSNASRERCGVP 183

Query: 189 FSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAER 248
           FSCC    D    ++N  CGY A+Q          P+V +    ++T GC+     W + 
Sbjct: 184 FSCC--TKDPAEDVINTQCGYDARQK---------PEV-DQQIVIYTKGCVPQFEKWLQD 231

Query: 249 NLYTIAGVALGVALSQV 265
           NL  +AG+ +G+AL Q+
Sbjct: 232 NLTIVAGIFIGIALLQI 248

Mus musculus (taxid: 10090)

>sp|P62079|TSN5_HUMAN Tetraspanin-5 OS=Homo sapiens GN=TSPAN5 PE=2 SV=1

 Score =  189 bits (480), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/257 (42%), Positives = 152/257 (59%), Gaps = 23/257 (8%)

Query: 13  VSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLL-KLETVYDVI-LNIALVLV 70
           VS C+KY IF  N IFW LG   + +GL+A    W   G+L  + ++ D+   +   + +
Sbjct: 11  VSCCIKYFIFGFNVIFWFLGITFLGIGLWA----WNEKGVLSNISSITDLGGFDPVWLFL 66

Query: 71  ILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEES 130
           ++G ++FI+ FAGC+GALRENT LLKF+S+ L I F LE+   V+ FVF   I+  L   
Sbjct: 67  VVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQL-YF 125

Query: 131 FTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNC--SSPSVEKCGVP 188
           F    I  YRDD DLQNLIDF Q+ +QCCG  + G  DW+ N YFNC  S+ S E+CGVP
Sbjct: 126 FINNNIRAYRDDIDLQNLIDFTQEYWQCCG--AFGADDWNLNIYFNCTDSNASRERCGVP 183

Query: 189 FSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAER 248
           FSCC    D    ++N  CGY A+Q          P+V +    ++T GC+     W + 
Sbjct: 184 FSCC--TKDPAEDVINTQCGYDARQK---------PEV-DQQIVIYTKGCVPQFEKWLQD 231

Query: 249 NLYTIAGVALGVALSQV 265
           NL  +AG+ +G+AL Q+
Sbjct: 232 NLTIVAGIFIGIALLQI 248

Homo sapiens (taxid: 9606)

>sp|Q17QJ5|TSN5_BOVIN Tetraspanin-5 OS=Bos taurus GN=TSPAN5 PE=2 SV=1

 Score =  189 bits (479), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/257 (42%), Positives = 152/257 (59%), Gaps = 23/257 (8%)

Query: 13  VSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLL-KLETVYDVI-LNIALVLV 70
           VS C+KY IF  N IFW LG   + +GL+A    W   G+L  + ++ D+   +   + +
Sbjct: 11  VSCCIKYFIFGFNVIFWFLGIAFLGIGLWA----WNEKGVLSNISSITDLGGFDPVWLFL 66

Query: 71  ILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEES 130
           ++G ++FI+ FAGC+GALRENT LLKF+S+ L I F LE+   V+ FVF   I+  L   
Sbjct: 67  VVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQL-YF 125

Query: 131 FTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNC--SSPSVEKCGVP 188
           F    I  YRDD DLQNLIDF Q+ +QCCG  + G  DW+ N YFNC  S+ S E+CGVP
Sbjct: 126 FINNNIRAYRDDIDLQNLIDFTQEYWQCCG--AFGADDWNLNIYFNCTDSNASRERCGVP 183

Query: 189 FSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAER 248
           FSCC    D    ++N  CGY A+Q          P+V +    ++T GC+     W + 
Sbjct: 184 FSCC--TKDPAEDVINTQCGYDARQK---------PEV-DQQIVIYTKGCVPQFEKWLQD 231

Query: 249 NLYTIAGVALGVALSQV 265
           NL  +AG+ +G+AL Q+
Sbjct: 232 NLTIVAGIFIGIALLQI 248

Bos taurus (taxid: 9913)

>sp|Q9D7W4|TSN17_MOUSE Tetraspanin-17 OS=Mus musculus GN=Tspan17 PE=2 SV=1

 Score =  187 bits (475), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 105/267 (39%), Positives = 155/267 (58%), Gaps = 19/267 (7%)

Query: 1   MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
           M  ++++     V  C KY +F  N +FW+LGAL +A+GL+A+ +K   S +  L  +  
Sbjct: 1   MPGKHQQFQDPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG 60

Query: 61  VILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFP 120
             L+   + V++G ++ ++ FAGC+GALRENT LLKF+S+ L + F LE+   ++ FVF 
Sbjct: 61  --LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFK 118

Query: 121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCS-- 178
             I+  L   F    +  YRDD DLQNLIDFAQ+ + CCG  + G  DW+ N YFNC+  
Sbjct: 119 DWIRDQL-NLFINNNVKAYRDDLDLQNLIDFAQEYWSCCG--ARGPNDWNLNIYFNCTDL 175

Query: 179 SPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGC 238
           +PS E+CGVPFSCC+   D    ++N  CGY            +L    E    ++T GC
Sbjct: 176 NPSRERCGVPFSCCV--RDPAEDVLNTQCGYDI----------RLKLELEQEGSIYTKGC 223

Query: 239 IEVMRLWAERNLYTIAGVALGVALSQV 265
           +     W + NL  +AGV +G+AL Q+
Sbjct: 224 VGQFEKWLQDNLIVVAGVLVGIALLQI 250

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
91090188	282	PREDICTED: similar to tetraspanin, putat	0.944	0.900	0.764	1e-117
332029092	300	Tetraspanin-33 [Acromyrmex echinatior]	0.947	0.85	0.739	1e-116
383866295	298	PREDICTED: tetraspanin-33-like [Megachil	0.947	0.855	0.743	1e-115
340725818	278	PREDICTED: tetraspanin-33-like isoform 1	0.947	0.917	0.732	1e-114
322799163	274	hypothetical protein SINV_14315 [Solenop	0.936	0.919	0.745	1e-114
157104679	278	tetraspanin, putative [Aedes aegypti] gi	0.936	0.906	0.740	1e-114
347967479	277	AGAP002257-PA [Anopheles gambiae str. PE	0.936	0.909	0.736	1e-113
170056427	278	tetraspanin [Culex quinquefasciatus] gi|	0.936	0.906	0.732	1e-112
193587023	280	PREDICTED: tetraspanin-33-like [Acyrthos	0.940	0.903	0.783	1e-112
156539613	277	PREDICTED: tetraspanin-33-like [Nasonia	0.947	0.920	0.713	1e-110

>gi|91090188|ref|XP_966752.1| PREDICTED: similar to tetraspanin, putative [Tribolium castaneum] gi|270013472|gb|EFA09920.1| hypothetical protein TcasGA2_TC012071 [Tribolium castaneum]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/268 (76%), Positives = 234/268 (87%), Gaps = 14/268 (5%)

Query: 2   HNR-YKR---SNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLET 57
           H R Y+R   S+FTYVS CVKY+IF+LNFIFWL G LLI +GLYAF+DKW+ +G +KLE 
Sbjct: 3   HRREYRRPATSSFTYVSSCVKYLIFVLNFIFWLFGGLLIGIGLYAFVDKWQLTGWVKLEN 62

Query: 58  VYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGF 117
           VYDVILN++LV+V++G +IFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEM +A++GF
Sbjct: 63  VYDVILNVSLVMVLMGGVIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMGIAIMGF 122

Query: 118 VFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNC 177
           VFPH +Q+ LEE+FT+KIIH YRDD DLQN IDFAQQEF+CCGLSSEGYMDWSKNEYFNC
Sbjct: 123 VFPHTMQSILEENFTDKIIHTYRDDPDLQNFIDFAQQEFRCCGLSSEGYMDWSKNEYFNC 182

Query: 178 SSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSG 237
           SSPSVE CGVPFSCCINATDI+SGLVNIMCGYG Q  S          VAEASKKVWTSG
Sbjct: 183 SSPSVEHCGVPFSCCINATDISSGLVNIMCGYGVQTLS----------VAEASKKVWTSG 232

Query: 238 CIEVMRLWAERNLYTIAGVALGVALSQV 265
           CIE++R WAERNLYTIAG+ALG+ALSQ+
Sbjct: 233 CIEIVRSWAERNLYTIAGIALGIALSQL 260

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332029092|gb|EGI69106.1| Tetraspanin-33 [Acromyrmex echinatior]

 Score =  422 bits (1084), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 196/265 (73%), Positives = 232/265 (87%), Gaps = 10/265 (3%)

Query: 1   MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
           M++R + +NFTYVS CVKYMIF+LNF+FWL G LLI VGLYAFLDKW+A+G +++E VYD
Sbjct: 1   MNHRRRSNNFTYVSSCVKYMIFMLNFVFWLFGGLLIGVGLYAFLDKWQATGSVRVENVYD 60

Query: 61  VILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFP 120
           V+LNI+LV++I G ++F+VSFAGCVGALRENTCLLKFYSLCLL+FFLLEM VA++GFVFP
Sbjct: 61  VVLNISLVMLIAGGVVFVVSFAGCVGALRENTCLLKFYSLCLLVFFLLEMGVAIVGFVFP 120

Query: 121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
           H +Q+ LEESFT+KII  YR+D DLQN IDFAQQEF+CCGLS EGY+DW KNEYFNC+SP
Sbjct: 121 HTLQSILEESFTDKIIQTYREDPDLQNFIDFAQQEFKCCGLSQEGYLDWGKNEYFNCTSP 180

Query: 181 SVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIE 240
           SVE+CGVPFSCCINATDI+SGLVNIMCGY  Q          LP V+EASKKVWTSGCIE
Sbjct: 181 SVERCGVPFSCCINATDISSGLVNIMCGYKVQ---------MLP-VSEASKKVWTSGCIE 230

Query: 241 VMRLWAERNLYTIAGVALGVALSQV 265
           ++R WAERNLYTIAG+ALG+ALSQ+
Sbjct: 231 IVRSWAERNLYTIAGIALGIALSQL 255

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866295|ref|XP_003708606.1| PREDICTED: tetraspanin-33-like [Megachile rotundata]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/265 (74%), Positives = 230/265 (86%), Gaps = 10/265 (3%)

Query: 1   MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
           M+NR + +NFTYVS CVKYMIFLLNFIFWL G LLI VGLYAF+DKW+A+G +++E VYD
Sbjct: 1   MNNRRRTNNFTYVSSCVKYMIFLLNFIFWLFGGLLIGVGLYAFVDKWQATGSVRVENVYD 60

Query: 61  VILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFP 120
           V+LNI+LV+VI G ++F+VSFAGCVGALRENTCLLKFYSLCLL+FFLLEM +A++GFVFP
Sbjct: 61  VVLNISLVMVIAGGVVFVVSFAGCVGALRENTCLLKFYSLCLLVFFLLEMGIAIVGFVFP 120

Query: 121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
           H +Q+ LEESFT+KII  YR+D DLQN IDF QQEF+CCGLS EGY+DW KNEYFNCSSP
Sbjct: 121 HTLQSLLEESFTDKIIQTYREDPDLQNFIDFGQQEFRCCGLSQEGYLDWGKNEYFNCSSP 180

Query: 181 SVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIE 240
           SVE+CGVPFSCCINATDI+SGLVNIMCGY  Q          LP V+EA KKVWTSGCIE
Sbjct: 181 SVERCGVPFSCCINATDISSGLVNIMCGYKVQ---------MLP-VSEAGKKVWTSGCIE 230

Query: 241 VMRLWAERNLYTIAGVALGVALSQV 265
           ++R WAERNLYTIAG+ALG+ALSQ+
Sbjct: 231 IVRSWAERNLYTIAGIALGIALSQL 255

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725818|ref|XP_003401262.1| PREDICTED: tetraspanin-33-like isoform 1 [Bombus terrestris] gi|350397237|ref|XP_003484816.1| PREDICTED: tetraspanin-33-like [Bombus impatiens]

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/265 (73%), Positives = 229/265 (86%), Gaps = 10/265 (3%)

Query: 1   MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
           M+NR + +NFTYVS CVKYMIF+LNF+FWL G LLI VGLYAF+DKW+A+G +++E VYD
Sbjct: 2   MNNRRRTNNFTYVSSCVKYMIFMLNFVFWLFGGLLIGVGLYAFVDKWQATGSVRVENVYD 61

Query: 61  VILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFP 120
           VILNI+LV+VI G ++F+VSFAGCVGALRENTCLLKFYSLCLL+FFLLEM +A++GFVFP
Sbjct: 62  VILNISLVMVIAGGVVFVVSFAGCVGALRENTCLLKFYSLCLLVFFLLEMGIAIVGFVFP 121

Query: 121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
           H +Q+ LEESFT+KII  YR+D DLQN IDF QQ+F+CCGLS EGY+DW KNEYFNCSSP
Sbjct: 122 HTLQSLLEESFTDKIIQTYREDPDLQNFIDFGQQKFRCCGLSQEGYLDWGKNEYFNCSSP 181

Query: 181 SVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIE 240
           SVE+CG PFSCCINATDI+SGLVNIMCGY  Q          LP V+EA KKVWTSGCIE
Sbjct: 182 SVERCGAPFSCCINATDISSGLVNIMCGYKVQ---------MLP-VSEAGKKVWTSGCIE 231

Query: 241 VMRLWAERNLYTIAGVALGVALSQV 265
           ++R WAERNLYTIAG+ALG+ALSQ+
Sbjct: 232 IVRSWAERNLYTIAGIALGIALSQL 256

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322799163|gb|EFZ20602.1| hypothetical protein SINV_14315 [Solenopsis invicta]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/263 (74%), Positives = 230/263 (87%), Gaps = 11/263 (4%)

Query: 3   NRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVI 62
           NR +RSNFTYVS CVKYMIF+LNF+FWL G LLI VGLYAF+DKW+A+G +++E VYDV+
Sbjct: 1   NR-RRSNFTYVSSCVKYMIFMLNFVFWLFGGLLIGVGLYAFVDKWQATGSVRVENVYDVV 59

Query: 63  LNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHH 122
           LNI+LV++I G ++F+VSFAGCVGALRENTCLLKFYSLCLL+FFLLEM VA++GFVFPH 
Sbjct: 60  LNISLVMLIAGGVVFVVSFAGCVGALRENTCLLKFYSLCLLVFFLLEMGVAIVGFVFPHT 119

Query: 123 IQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSV 182
           +Q+ LEESFT+KII  YR+D DLQN IDF QQEF+CCGLS EGY+DW KNEYFNC+SPSV
Sbjct: 120 LQSLLEESFTDKIIQTYREDPDLQNFIDFGQQEFKCCGLSQEGYLDWGKNEYFNCTSPSV 179

Query: 183 EKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVM 242
           E+CGVPFSCCINATDI+SGLVNIMCGY  Q          LP V+EASKKVWTSGCIE++
Sbjct: 180 ERCGVPFSCCINATDISSGLVNIMCGYKVQ---------MLP-VSEASKKVWTSGCIEIV 229

Query: 243 RLWAERNLYTIAGVALGVALSQV 265
           R WAERNLYTIAG+ALG+ALSQ+
Sbjct: 230 RSWAERNLYTIAGIALGIALSQL 252

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157104679|ref|XP_001648520.1| tetraspanin, putative [Aedes aegypti] gi|108880293|gb|EAT44518.1| AAEL004147-PA [Aedes aegypti]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/262 (74%), Positives = 224/262 (85%), Gaps = 10/262 (3%)

Query: 4   RYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVIL 63
           RY   NFTYVS CVKYMIF+LNFIFWL G LLI +G YAF+DKW+A+GL+KLETVYD++L
Sbjct: 5   RYPTQNFTYVSSCVKYMIFMLNFIFWLFGGLLIGIGFYAFVDKWQATGLIKLETVYDIVL 64

Query: 64  NIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHI 123
           NI+LV++I G I+F+VSFAGC+GALRENTCLLKFYSLCLL+FFL EM VA++GFVFPH +
Sbjct: 65  NISLVMIIAGGIVFVVSFAGCLGALRENTCLLKFYSLCLLMFFLCEMAVAIVGFVFPHKM 124

Query: 124 QATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVE 183
              LE+SFT+KII  YRDD DLQN IDFAQQEF CCGLS+EGY+DW KNEYFNCSSPSVE
Sbjct: 125 NIVLEDSFTDKIITTYRDDPDLQNFIDFAQQEFHCCGLSNEGYLDWGKNEYFNCSSPSVE 184

Query: 184 KCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMR 243
           KCGVP+SCCINATDI+SGLVNIMCGY  QQ S          VA ASKK+WTSGCIE++R
Sbjct: 185 KCGVPYSCCINATDISSGLVNIMCGYHIQQQS----------VAAASKKIWTSGCIEIVR 234

Query: 244 LWAERNLYTIAGVALGVALSQV 265
           +WAERNLY IAG+ALG ALSQ+
Sbjct: 235 VWAERNLYLIAGIALGAALSQL 256

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347967479|ref|XP_307926.5| AGAP002257-PA [Anopheles gambiae str. PEST] gi|333466276|gb|EAA03776.5| AGAP002257-PA [Anopheles gambiae str. PEST]

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/262 (73%), Positives = 223/262 (85%), Gaps = 10/262 (3%)

Query: 4   RYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVIL 63
           RY   NFTYVS CVKYMIFLLNFIFWL G LLI +G YAF+DKW+A+GL+KLET YD++L
Sbjct: 5   RYPTHNFTYVSSCVKYMIFLLNFIFWLFGGLLIGIGFYAFVDKWQATGLIKLETFYDIVL 64

Query: 64  NIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHI 123
           N++LV++I GAI+F+VS AGC+GALRENTCLLKFYSLCLLIFFL EM +A+  FVFPH +
Sbjct: 65  NLSLVMIIAGAIVFVVSLAGCLGALRENTCLLKFYSLCLLIFFLCEMAIAITAFVFPHKV 124

Query: 124 QATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVE 183
            A LEESFT+KII  YRDD DLQNLIDFAQQEF CCGLS+EGY+DW KNEYFNCSSPSVE
Sbjct: 125 NAVLEESFTDKIITTYRDDPDLQNLIDFAQQEFHCCGLSNEGYLDWGKNEYFNCSSPSVE 184

Query: 184 KCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMR 243
           KCGVP+SCCINATDI+SGLVNIMCGY  QQ S          VA ASKK+WT+GCIE++R
Sbjct: 185 KCGVPYSCCINATDISSGLVNIMCGYHIQQQS----------VAAASKKIWTNGCIEIVR 234

Query: 244 LWAERNLYTIAGVALGVALSQV 265
           +WAERNLY IAG+ALG A+SQ+
Sbjct: 235 VWAERNLYVIAGIALGAAISQL 256

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170056427|ref|XP_001864025.1| tetraspanin [Culex quinquefasciatus] gi|167876122|gb|EDS39505.1| tetraspanin [Culex quinquefasciatus]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/262 (73%), Positives = 223/262 (85%), Gaps = 10/262 (3%)

Query: 4   RYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVIL 63
           R    NFTYVS CVKYMIFLLNFIFWL G LLI +G YAF+DKW+A+GL+KLET YD++L
Sbjct: 5   RNPTHNFTYVSSCVKYMIFLLNFIFWLFGGLLIGIGFYAFVDKWQATGLIKLETFYDIVL 64

Query: 64  NIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHI 123
           NI+LV++I G I+F+VSFAGC+GALRENTCLLKFYSLCLL+FFL EM VA++GFVFPH +
Sbjct: 65  NISLVMIIAGGIVFVVSFAGCLGALRENTCLLKFYSLCLLMFFLCEMAVAIVGFVFPHKM 124

Query: 124 QATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVE 183
              LEESFT+KII  YRDD DLQNLIDFAQQEF CCGLS++GY+DW KNEYFNC+SPSVE
Sbjct: 125 NIVLEESFTDKIITTYRDDPDLQNLIDFAQQEFHCCGLSNDGYLDWGKNEYFNCTSPSVE 184

Query: 184 KCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMR 243
           +CGVP+SCCINATDI+SGLVNIMCGY  QQ S          VA ASKK+WTSGCIE++R
Sbjct: 185 RCGVPYSCCINATDISSGLVNIMCGYHIQQQS----------VAAASKKIWTSGCIEIVR 234

Query: 244 LWAERNLYTIAGVALGVALSQV 265
           +WAERNLY IAG+ALG ALSQ+
Sbjct: 235 VWAERNLYLIAGIALGAALSQL 256

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193587023|ref|XP_001945097.1| PREDICTED: tetraspanin-33-like [Acyrthosiphon pisum]

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/263 (78%), Positives = 231/263 (87%), Gaps = 10/263 (3%)

Query: 3   NRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVI 62
           NR + +NFTYVSPCVKYMIFLLNF+FWL G LL+A G +AF +KW   G +KL T  DVI
Sbjct: 6   NRRRVNNFTYVSPCVKYMIFLLNFLFWLFGGLLVAAGTFAFYEKWNTMGSIKLNTFSDVI 65

Query: 63  LNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHH 122
           LNI+LVL+I G IIFIVSFAGC+GALRENT LLKFYSLCLLIFFLLEM +A+IGFVFPH+
Sbjct: 66  LNISLVLIIAGQIIFIVSFAGCIGALRENTTLLKFYSLCLLIFFLLEMGIAIIGFVFPHN 125

Query: 123 IQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSV 182
           +QATLEESFT+KIIH YRDD DLQNLIDFAQ+EFQCCGLSSEGY+DWSKNEYFNC+SPSV
Sbjct: 126 MQATLEESFTDKIIHTYRDDPDLQNLIDFAQKEFQCCGLSSEGYIDWSKNEYFNCTSPSV 185

Query: 183 EKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVM 242
           EKCGVP+SCCINATDI+ GLVN+MCGYGAQ SS          VAEASK+VWTSGCIEV+
Sbjct: 186 EKCGVPYSCCINATDISKGLVNVMCGYGAQDSS----------VAEASKRVWTSGCIEVI 235

Query: 243 RLWAERNLYTIAGVALGVALSQV 265
           R+WAERNLYTIAGVALGVALSQ+
Sbjct: 236 RIWAERNLYTIAGVALGVALSQL 258

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156539613|ref|XP_001599019.1| PREDICTED: tetraspanin-33-like [Nasonia vitripennis]

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/265 (71%), Positives = 224/265 (84%), Gaps = 10/265 (3%)

Query: 1   MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
           M+NR + +NFTYVS CVKYMIF+LNFIFWL G LLI VGLYAF+DKW+ +G +++E VYD
Sbjct: 1   MNNRRRTNNFTYVSSCVKYMIFMLNFIFWLFGGLLIGVGLYAFVDKWQMTGSVRVENVYD 60

Query: 61  VILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFP 120
           ++LNI+LV++I GA++FIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEM VA++GFVFP
Sbjct: 61  IVLNISLVMIIAGAVVFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMGVAIVGFVFP 120

Query: 121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
           H +Q+ LEESFT+KII  YR+D DLQN IDF Q+EF+CCGLS  GY+DW KNEYFNCSSP
Sbjct: 121 HTLQSLLEESFTDKIIQTYREDPDLQNFIDFGQKEFKCCGLSQIGYLDWGKNEYFNCSSP 180

Query: 181 SVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIE 240
           S E CGVPFSCCIN T+I S LVN MCG G Q++           V+EASKKVWTSGCIE
Sbjct: 181 SSEGCGVPFSCCINDTNIASRLVNNMCGNGVQKTP----------VSEASKKVWTSGCIE 230

Query: 241 VMRLWAERNLYTIAGVALGVALSQV 265
           ++R WAERNLYTIAG+ALG+ALSQ+
Sbjct: 231 IVRAWAERNLYTIAGIALGIALSQL 255

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
FB|FBgn0037848	291	Tsp86D "Tetraspanin 86D" [Dros	0.947	0.876	0.597	1e-82
FB|FBgn0040334	304	Tsp3A "Tetraspanin 3A" [Drosop	0.947	0.838	0.590	2e-81
UNIPROTKB|E2QZH1	270	TSPAN14 "Uncharacterized prote	0.914	0.911	0.393	1.2e-40
UNIPROTKB|Q2KJ41	270	TSPAN14 "Tetraspanin 14" [Bos	0.914	0.911	0.389	2e-40
UNIPROTKB|F1SEQ6	270	TSPAN14 "Uncharacterized prote	0.914	0.911	0.389	3.3e-40
UNIPROTKB|Q8NG11	270	TSPAN14 "Tetraspanin-14" [Homo	0.914	0.911	0.393	4.2e-40
RGD|1305714	270	Tspan14 "tetraspanin 14" [Ratt	0.914	0.911	0.389	4.2e-40
ZFIN|ZDB-GENE-030131-3673	270	tspan17 "tetraspanin 17" [Dani	0.869	0.866	0.389	4.2e-40
ZFIN|ZDB-GENE-060825-329	271	tspan14 "tetraspanin 14" [Dani	0.918	0.911	0.376	4.2e-40
MGI|MGI:1196325	270	Tspan14 "tetraspanin 14" [Mus	0.914	0.911	0.389	5.3e-40

FB|FBgn0037848 Tsp86D "Tetraspanin 86D" [Drosophila melanogaster (taxid:7227)]

 Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
 Identities = 160/268 (59%), Positives = 191/268 (71%)

Query:     1 MHNRYKR--SNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDK-WEASGLLKLET 57
             MH R      +F+YVS CVKYMIFLLNF+FWL G LL+A+G+YAF+DK  + +G L+L+T
Sbjct:    13 MHPRISTYPHHFSYVSSCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRLDT 72

Query:    58 VYDXXXXXXXXXXXXXXXXXXXSFAGCVGALRENTCLLKXXXXXXXXXXXXXXXVAVIGF 117
             +YD                   SFAGC+GALRENT LLK               +A+I F
Sbjct:    73 IYDVIFNISLVMIIAGVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICF 132

Query:   118 VFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNC 177
             VFP ++ + LE  FT+KIIH YRDD+DLQN IDFAQQEF CCGLS+ GY DWSKNEYFNC
Sbjct:   133 VFPQYMNSFLEYQFTDKIIHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNC 192

Query:   178 SSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSG 237
             SSPSVE+CGVP+SCCINATDI+SGLVNIMCGYG Q  S          VA ASK++WTSG
Sbjct:   193 SSPSVERCGVPYSCCINATDISSGLVNIMCGYGVQVRS----------VAAASKRIWTSG 242

Query:   238 CIEVMRLWAERNLYTIAGVALGVALSQV 265
             CIE++R+W ERNLY IAGVALG+AL Q+
Sbjct:   243 CIEIVRVWVERNLYVIAGVALGIALLQL 270

GO:0016021 "integral to membrane" evidence=IEA;ISM;ISS

GO:0003674 "molecular_function" evidence=ND

GO:0007399 "nervous system development" evidence=IMP

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IMP

FB|FBgn0040334 Tsp3A "Tetraspanin 3A" [Drosophila melanogaster (taxid:7227)]

 Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
 Identities = 157/266 (59%), Positives = 185/266 (69%)

Query:     1 MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWE-ASGLLKLETVY 59
             +H      +FTYVS CVKYMIFLLNF+FWL G LL+ +G+YAF DKWE A+G ++LE  Y
Sbjct:    27 VHEVMHPHHFTYVSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFY 86

Query:    60 DXXXXXXXXXXXXXXXXXXXSFAGCVGALRENTCLLKXXXXXXXXXXXXXXXVAVIGFVF 119
             D                   SF+GCVGALRENT LLK               +A++ FV 
Sbjct:    87 DVFLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVC 146

Query:   120 PHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSS 179
             P ++   LE+ FT KIIH YRDD DLQN IDFAQQEF+CCGLS+ GY DWSKNEYFNCSS
Sbjct:   147 PQYMNTFLEKQFTHKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSS 206

Query:   180 PSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCI 239
             PSVEKCGVP+SCCINATDI+SGLVNIMCGYG Q +         P V EA+K +WTSGCI
Sbjct:   207 PSVEKCGVPYSCCINATDISSGLVNIMCGYGVQNA---------P-VPEATKLIWTSGCI 256

Query:   240 EVMRLWAERNLYTIAGVALGVALSQV 265
             E++R+WAE NLY IAG ALG+AL Q+
Sbjct:   257 EIVRVWAEHNLYVIAGNALGIALIQL 282

GO:0016021 "integral to membrane" evidence=IEA;ISM;ISS

GO:0003674 "molecular_function" evidence=ND

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IMP

UNIPROTKB|E2QZH1 TSPAN14 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 105/267 (39%), Positives = 137/267 (51%)

Query:     1 MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
             MH  Y+ SN   VS   KY++F  N +FWL G + + VGL+A+ +K   S L K+  ++ 
Sbjct:     1 MHY-YRYSN-AEVSCWYKYLLFSYNIVFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRLHG 58

Query:    61 XXXXXXXXXXXXXXXXXXXSFAGCVGALRENTCLLKXXXXXXXXXXXXXXXVAVIGFVFP 120
                                 FAGCVGALREN CLLK               VAV+ F+F 
Sbjct:    59 IDPVVLVLMVGVVMFTL--GFAGCVGALRENICLLKFFCGTIVLIFFLELAVAVLAFLFQ 116

Query:   121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
               ++    E F E  I  YRDD DLQNLID  Q+  QCCG  + G  DW  N YFNCS  
Sbjct:   117 DWVRDRFREFF-ESNIRSYRDDIDLQNLIDSLQKANQCCG--AYGPEDWDLNVYFNCSGA 173

Query:   181 SV--EKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGC 238
             S   EKCGVPFSCC+   D    +VN  CGY  +         QL    + S  ++T GC
Sbjct:   174 SYSREKCGVPFSCCV--PDPAQKVVNTQCGYDVRT--------QLKSKWDES--IFTKGC 221

Query:   239 IEVMRLWAERNLYTIAGVALGVALSQV 265
             I+ +  W  RN+Y +AGV + ++L Q+
Sbjct:   222 IQALEGWLPRNIYIVAGVFIAISLLQI 248

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q2KJ41 TSPAN14 "Tetraspanin 14" [Bos taurus (taxid:9913)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 104/267 (38%), Positives = 136/267 (50%)

Query:     1 MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
             MH  Y+ SN   VS   KY++F  N +FWL G + + VGL+A+ +K   S L K+  ++ 
Sbjct:     1 MHY-YRYSN-AEVSCWYKYLLFSYNIVFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRMHG 58

Query:    61 XXXXXXXXXXXXXXXXXXXSFAGCVGALRENTCLLKXXXXXXXXXXXXXXXVAVIGFVFP 120
                                 FAGCVGALREN CLL                VAV+ F+F 
Sbjct:    59 IDPVVLVLMVGVVMFTL--GFAGCVGALRENICLLNFFCSTIVLIFFLELAVAVLAFLFQ 116

Query:   121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
               ++    E F E  I  YRDD DLQNLID  Q+  QCCG  + G  DW  N YFNCS  
Sbjct:   117 DWVRDRFREFF-ESNIRSYRDDIDLQNLIDSLQKANQCCG--AYGPEDWDLNVYFNCSGA 173

Query:   181 SV--EKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGC 238
             S   EKCGVPFSCC+   D    +VN  CGY  +         QL    + S  ++T GC
Sbjct:   174 SYSREKCGVPFSCCV--PDPAQKVVNTQCGYDVRT--------QLKSKWDES--IFTKGC 221

Query:   239 IEVMRLWAERNLYTIAGVALGVALSQV 265
             I+ +  W  RN+Y +AGV + ++L Q+
Sbjct:   222 IQALESWLPRNIYIVAGVFIAISLLQI 248

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SEQ6 TSPAN14 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 104/267 (38%), Positives = 136/267 (50%)

Query:     1 MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
             MH  Y+ SN   VS   KY++F  N +FWL G + + VGL+A+ +K   S L K+  ++ 
Sbjct:     1 MHY-YRYSN-AEVSCWYKYLLFSYNIVFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRMHG 58

Query:    61 XXXXXXXXXXXXXXXXXXXSFAGCVGALRENTCLLKXXXXXXXXXXXXXXXVAVIGFVFP 120
                                 FAGCVGALREN CLL                VAV+ F+F 
Sbjct:    59 IDPVVLVLMVGVVMFTL--GFAGCVGALRENICLLNFFCSAIVLIFFLELAVAVLAFLFQ 116

Query:   121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
               ++    E F E  I  YRDD DLQNLID  Q+  QCCG  + G  DW  N YFNCS  
Sbjct:   117 DWVRDRFREFF-ESNIRSYRDDIDLQNLIDSLQKANQCCG--AYGPEDWDLNVYFNCSGA 173

Query:   181 SV--EKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGC 238
             S   EKCGVPFSCC+   D    +VN  CGY  +         QL    + S  ++T GC
Sbjct:   174 SYSREKCGVPFSCCV--PDPAQKVVNTQCGYDVRT--------QLKSKWDES--IFTKGC 221

Query:   239 IEVMRLWAERNLYTIAGVALGVALSQV 265
             I+ +  W  RN+Y +AGV + ++L Q+
Sbjct:   222 IQALEGWLPRNIYIVAGVFIAISLLQI 248

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8NG11 TSPAN14 "Tetraspanin-14" [Homo sapiens (taxid:9606)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 105/267 (39%), Positives = 136/267 (50%)

Query:     1 MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
             MH  Y+ SN   VS   KY++F  N IFWL G + + VGL+A+ +K   S L K+  ++ 
Sbjct:     1 MHY-YRYSN-AKVSCWYKYLLFSYNIIFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRMHG 58

Query:    61 XXXXXXXXXXXXXXXXXXXSFAGCVGALRENTCLLKXXXXXXXXXXXXXXXVAVIGFVFP 120
                                 FAGCVGALREN CLL                VAV+ F+F 
Sbjct:    59 IDPVVLVLMVGVVMFTL--GFAGCVGALRENICLLNFFCGTIVLIFFLELAVAVLAFLFQ 116

Query:   121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
               ++    E F E  I  YRDD DLQNLID  Q+  QCCG  + G  DW  N YFNCS  
Sbjct:   117 DWVRDRFREFF-ESNIKSYRDDIDLQNLIDSLQKANQCCG--AYGPEDWDLNVYFNCSGA 173

Query:   181 SV--EKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGC 238
             S   EKCGVPFSCC+   D    +VN  CGY  +         QL    + S  ++T GC
Sbjct:   174 SYSREKCGVPFSCCV--PDPAQKVVNTQCGYDVRI--------QLKSKWDES--IFTKGC 221

Query:   239 IEVMRLWAERNLYTIAGVALGVALSQV 265
             I+ +  W  RN+Y +AGV + ++L Q+
Sbjct:   222 IQALESWLPRNIYIVAGVFIAISLLQI 248

GO:0016021 "integral to membrane" evidence=IEA

RGD|1305714 Tspan14 "tetraspanin 14" [Rattus norvegicus (taxid:10116)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 104/267 (38%), Positives = 138/267 (51%)

Query:     1 MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
             MH  Y+ SN   VS   KY++F  N +FWL G + + VGL+A+ +K   S L K+  ++ 
Sbjct:     1 MHY-YRYSN-AEVSCWYKYLLFSYNIVFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRLHG 58

Query:    61 XXXXXXXXXXXXXXXXXXXSFAGCVGALRENTCLLKXXXXXXXXXXXXXXXVAVIGFVFP 120
                                 FAGCVGALREN CLLK               VAV+ F+F 
Sbjct:    59 IDPVVLVLMVGVVMFTL--GFAGCVGALRENICLLKFFCGAIVLIFFLELAVAVLAFLFQ 116

Query:   121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
               ++    E F E  I  YRDD DLQNLID  Q+  QCCG  + G  DW  N YFNCS  
Sbjct:   117 DWVRDRFREFF-ESNIRSYRDDIDLQNLIDSLQKANQCCG--AYGPEDWDLNVYFNCSGA 173

Query:   181 SV--EKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGC 238
             S   EKCGVPFSCC+   D    +VN  CGY  +         QL   ++  + ++T GC
Sbjct:   174 SYSREKCGVPFSCCV--PDPAQKVVNTQCGYDVRI--------QLK--SKWDEFIFTKGC 221

Query:   239 IEVMRLWAERNLYTIAGVALGVALSQV 265
             I+ +  W  RN+Y +AGV + ++L Q+
Sbjct:   222 IQALEGWLPRNIYIVAGVFIAISLLQI 248

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-030131-3673 tspan17 "tetraspanin 17" [Danio rerio (taxid:7955)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 100/257 (38%), Positives = 134/257 (52%)

Query:    13 VSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLK-LETVYDXXXXXXX-XXX 70
             VS CVKY +F  N IFWLLGA  + +GL+A    W   G+L  + ++ D           
Sbjct:    13 VSCCVKYFLFGFNIIFWLLGAAFLGIGLWA----WAEKGVLSNISSITDLGGFDPVWLFI 68

Query:    71 XXXXXXXXXSFAGCVGALRENTCLLKXXXXXXXXXXXXXXXVAVIGFVFPHHIQATLEES 130
                       FAGC+GALRENT LLK                 ++ FVF   I+  L   
Sbjct:    69 VVGGVMFILGFAGCIGALRENTFLLKFFSVFLGLIFFLELTAGILAFVFKDWIKDQLN-F 127

Query:   131 FTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCS--SPSVEKCGVP 188
             F    +  YRDD DLQNLIDFAQ+ + CCG  + G  DW+ N YFNC+  +PS E+CGVP
Sbjct:   128 FINNNVKAYRDDIDLQNLIDFAQEYWSCCG--AHGPNDWNLNIYFNCTDFNPSRERCGVP 185

Query:   189 FSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAER 248
             FSCC+   D    ++N  CGY  +     L+  +L Q     K ++T GC+     W + 
Sbjct:   186 FSCCVK--DPAEDVLNTQCGYDVR-----LQV-ELDQ----QKYIYTKGCVGQFEKWLQD 233

Query:   249 NLYTIAGVALGVALSQV 265
             NL  +AGV +G+AL Q+
Sbjct:   234 NLIVVAGVFVGIALLQI 250

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-060825-329 tspan14 "tetraspanin 14" [Danio rerio (taxid:7955)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 101/268 (37%), Positives = 136/268 (50%)

Query:     1 MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
             MH  Y R     VS C KY++F  N IFWL G+  IA+G +A+ +K   S L ++  ++ 
Sbjct:     1 MH--YYRYENAEVSCCYKYLMFSYNIIFWLAGSAFIAIGFWAWSEKGVLSDLTQVTRLHG 58

Query:    61 XXXXXXXXXXXXXXXXXXXSFAGCVGALRENTCLLKXXXXXXXXXXXXXXXVAVIGFVFP 120
                                 FAGCVGALREN CLLK                AV+ FVF 
Sbjct:    59 FDPVWGVLVVGTVTFIL--GFAGCVGALRENICLLKFFSGVIGFIFFLELTAAVLAFVFQ 116

Query:   121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
               ++  + E F   +   YRDD DLQNLID  Q+   CCG       DW+ N YFNCS+ 
Sbjct:   117 GQVREWISEFFLANV-KAYRDDIDLQNLIDSLQKLNHCCGAKHPN--DWNMNVYFNCSNK 173

Query:   181 ---SVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSG 237
                S EKCGVPFSCCI+   +T  ++N  CGY  ++  G L         + S  ++  G
Sbjct:   174 NNLSREKCGVPFSCCISEPAVT--VLNTQCGYDVREK-GTLN--------DWSSSIYIKG 222

Query:   238 CIEVMRLWAERNLYTIAGVALGVALSQV 265
             CI+ +  W  RNLY +AGV + ++L Q+
Sbjct:   223 CIDALEDWLPRNLYIVAGVFIVISLLQM 250

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

MGI|MGI:1196325 Tspan14 "tetraspanin 14" [Mus musculus (taxid:10090)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 104/267 (38%), Positives = 138/267 (51%)

Query:     1 MHNRYKRSNFTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYD 60
             MH  Y+ SN   VS   KY++F  N +FWL G + + VGL+A+ +K   S L K+  ++ 
Sbjct:     1 MHY-YRYSN-AEVSCWYKYLLFSYNIVFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRLHG 58

Query:    61 XXXXXXXXXXXXXXXXXXXSFAGCVGALRENTCLLKXXXXXXXXXXXXXXXVAVIGFVFP 120
                                 FAGCVGALREN CLLK               VAV+ F+F 
Sbjct:    59 IDPVVLVLMVGVVMFTL--GFAGCVGALRENICLLKFFCGAIVLIFFLELAVAVLAFLFQ 116

Query:   121 HHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
               ++    E F E  I  YRDD DLQNLID  Q+  QCCG  + G  DW  N YFNCS  
Sbjct:   117 DWVRDRFREFF-ESNIKSYRDDIDLQNLIDSLQKANQCCG--AYGPEDWDLNVYFNCSGA 173

Query:   181 SV--EKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGC 238
             S   EKCGVPFSCC+   D    +VN  CGY  +         QL   ++  + ++T GC
Sbjct:   174 SYSREKCGVPFSCCV--PDPAQKVVNTQCGYDVRI--------QLK--SKWDEFIFTKGC 221

Query:   239 IEVMRLWAERNLYTIAGVALGVALSQV 265
             I+ +  W  RN+Y +AGV + ++L Q+
Sbjct:   222 IQALEGWLPRNIYIVAGVFIAISLLQI 248

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8R3S2	TSN33_MOUSE	No assigned EC number	0.4346	0.8810	0.8374	yes	N/A
Q3SYV5	TSN33_BOVIN	No assigned EC number	0.4423	0.8810	0.8374	yes	N/A
Q86UF1	TSN33_HUMAN	No assigned EC number	0.4302	0.8736	0.8303	yes	N/A
Q5RH71	TSN33_DANRE	No assigned EC number	0.4384	0.8773	0.8398	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	269
cd03158	119	cd03158, penumbra_like_LEL, Tetraspanin, extracell	6e-57
pfam00335	221	pfam00335, Tetraspannin, Tetraspanin family	3e-42
cd03159	121	cd03159, TM4SF9_like_LEL, Tetraspanin, extracellul	1e-28
cd03167	120	cd03167, oculospanin_like_LEL, Tetraspanin, extrac	9e-25
cd03127	90	cd03127, tetraspanin_LEL, Tetraspanin, extracellul	9e-13
cd03166	99	cd03166, CD63_LEL, Tetraspanin, extracellular doma	3e-09
cd03161	104	cd03161, TM4SF2_6_like_LEL, Tetraspanin, extracell	3e-09
cd03155	110	cd03155, CD151_like_LEL, Tetraspanin, extracellula	1e-08
cd03162	143	cd03162, peripherin_like_LEL, Tetraspanin, extrace	2e-07
cd03154	100	cd03154, TM4SF3_like_LEL, Tetraspanin, extracellul	2e-07
cd03164	86	cd03164, CD53_like_LEL, Tetraspanin, extracellular	1e-05
cd03165	98	cd03165, NET-5_like_LEL, Tetraspanin, extracellula	1e-05
cd03160	117	cd03160, CD37_CD82_like_LEL, Tetraspanin, extracel	2e-04
cd03156	114	cd03156, uroplakin_I_like_LEL, Tetraspanin, extrac	7e-04
cd03163	105	cd03163, TM4SF8_like_LEL, Tetraspanin, extracellul	0.001

>gnl|CDD|239411 cd03158, penumbra_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), penumbra_like family

 Score =  177 bits (452), Expect = 6e-57
 Identities = 67/134 (50%), Positives = 85/134 (63%), Gaps = 15/134 (11%)

Query: 117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFN 176
           F+F +     LEE+  + I+H Y DD DLQN+IDF Q+EF+CCG   + Y DWSKN YFN
Sbjct: 1   FIFSNQTIDLLEENIRKAIVH-YYDDLDLQNIIDFVQKEFKCCGG--DDYRDWSKNMYFN 57

Query: 177 CSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTS 236
           CSSP+ E CGVP+SCCI A D    ++N MCGYG Q            +  EASK ++T 
Sbjct: 58  CSSPNPEACGVPYSCCIRAKD--QEVINTMCGYGVQNL----------ERLEASKLIYTR 105

Query: 237 GCIEVMRLWAERNL 250
           GCI+ + LW E NL
Sbjct: 106 GCIDAVVLWIEDNL 119

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Human Penumbra exhibits growth-suppressive activity in vitro and has been associated with myeloid malignancies. Length = 119

>gnl|CDD|215864 pfam00335, Tetraspannin, Tetraspanin family

 Score =  143 bits (363), Expect = 3e-42
 Identities = 74/250 (29%), Positives = 126/250 (50%), Gaps = 42/250 (16%)

Query: 16  CVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAI 75
           C+KY++FLLN +F LLG  L+AVG++  +   +         + D I  + +++++LG I
Sbjct: 1   CLKYLLFLLNLLFLLLGLALLAVGIWLLVIAKDYLA----IALNDSIRALYILIIVLGVI 56

Query: 76  IFIVSFAGCVGALRENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKI 135
           I +V F GC GA++E+ CLL  Y + LLI F+LE+   ++ FV+   ++++L+E    K 
Sbjct: 57  ILLVGFLGCCGAIKESRCLLLTYFILLLILFILEIAAGILAFVYRDKLESSLKEGLNYKD 116

Query: 136 IHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINA 195
              Y DD +L   ID  Q+  +CCG+    Y DW  ++YF+ SS + +     ++   + 
Sbjct: 117 KS-YNDDPNLTEAIDELQKSLECCGV--NSYTDWLDSQYFSPSSSNPDSDCCCWNNDTSN 173

Query: 196 TDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIAG 255
            +I                                   +T GC E +  + ++NL  I G
Sbjct: 174 LNI-----------------------------------YTEGCKEKLLEFLKKNLKIIGG 198

Query: 256 VALGVALSQV 265
           V LG+A+ Q+
Sbjct: 199 VGLGIAVIQL 208

Length = 221

>gnl|CDD|239412 cd03159, TM4SF9_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily

 Score =  105 bits (263), Expect = 1e-28
 Identities = 56/136 (41%), Positives = 71/136 (52%), Gaps = 17/136 (12%)

Query: 117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFN 176
           FVF   I+  L E     I   YRDD DLQNLIDF Q+ +QCCG    G  DW+ N YFN
Sbjct: 1   FVFKDWIKDQLTEFLNNNIRA-YRDDIDLQNLIDFLQEYWQCCGAR--GPDDWNLNIYFN 57

Query: 177 CS--SPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVW 234
           C+  +PS E+CGVPFSCC+   D    +VN  CGY  ++              E    + 
Sbjct: 58  CTDSNPSRERCGVPFSCCVK--DPAEDVVNTQCGYDVRKKPE----------LELQHHIH 105

Query: 235 TSGCIEVMRLWAERNL 250
           T GC++    W + NL
Sbjct: 106 TKGCVQAFEKWLQDNL 121

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 9 (TM4SF9) or Tetraspanin-5 and related proteins. TM4SF9 is strongly expressed witin the central nervous system, and expression levels appear to correlate with differentiation status of particular neurons, hinting at a role in neuronal maturation. Length = 121

>gnl|CDD|239420 cd03167, oculospanin_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), oculospanin_like family

 Score = 95.2 bits (237), Expect = 9e-25
 Identities = 54/128 (42%), Positives = 68/128 (53%), Gaps = 14/128 (10%)

Query: 123 IQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSV 182
           +Q  LE +    I H Y+DD DL+ LID  Q   QCCG SS  Y DW +N YFNCSSP V
Sbjct: 7   LQDGLEHTLRLAIAH-YQDDPDLRFLIDQVQLGLQCCGASS--YQDWQQNLYFNCSSPGV 63

Query: 183 EKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVM 242
           + C +P SCCI+  +    +VN  CG+GA           L + A A + V   GC   +
Sbjct: 64  QACSLPASCCIDPRE-DGAVVNDQCGFGAL---------GLDEDA-AQRVVHLGGCGPPL 112

Query: 243 RLWAERNL 250
           R W   NL
Sbjct: 113 RRWLRGNL 120

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contains sequences similar to oculospanin, which is found to be expressed in retinal pigment epithelium, iris, ciliary body, and retinal ganglion cells. Length = 120

>gnl|CDD|239401 cd03127, tetraspanin_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL)

 Score = 62.1 bits (151), Expect = 9e-13
 Identities = 25/134 (18%), Positives = 43/134 (32%), Gaps = 44/134 (32%)

Query: 117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFN 176
           FV+   +++ + ++  +     Y  D D Q  +D  Q  F+CCG++  G  D+       
Sbjct: 1   FVYRDQLESLVSDTLNDAWDE-YYVDDDFQEAMDALQSTFECCGVN--GPTDYLDLR--- 54

Query: 177 CSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTS 236
                     VP SCC                                        ++T 
Sbjct: 55  --------LLVPSSCCKG------------------------------TDGNCGLNLYTE 76

Query: 237 GCIEVMRLWAERNL 250
           GC+E +  +   NL
Sbjct: 77  GCLEKLVDFLRSNL 90

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. The tetraspanin family contains CD9, CD63, CD37, CD53, CD82, CD151, and CD81, amongst others. Tetraspanins are involved in diverse processes such as cell activation and proliferation, adhesion and motility, differentiation, cancer, and others. Their various functions may relate to their ability to act as molecular facilitators, grouping specific cell-surface proteins and affecting formation and stability of signaling complexes. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web", which may also include integrins. Length = 90

>gnl|CDD|239419 cd03166, CD63_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), CD63 family

 Score = 53.2 bits (128), Expect = 3e-09
 Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 35/134 (26%)

Query: 117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFN 176
           +VF   + +   +SF + I + Y    D + ++D  Q++ +CCG ++  Y DW   E   
Sbjct: 1   YVFRDKVMSEFNDSFNQMISN-YNKTNDFRKILDRMQKDLKCCGANN--YTDW---ENI- 53

Query: 177 CSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTS 236
              PS++   VP SCCIN   +T G     CG                      K +   
Sbjct: 54  ---PSLDTDSVPDSCCIN---VTKG-----CGINFD-----------------EKVIHLE 85

Query: 237 GCIEVMRLWAERNL 250
           GC+  +  W ++N+
Sbjct: 86  GCVTKIEGWLKKNI 99

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD63 is present in platelets, neutrophils, and endothelial cells, amongst others. In platelets it associates with the integrin alphaIIBbeta3 and may modulate alphaIIbbeta3-dependent cytoskeletal reorganization. Length = 99

>gnl|CDD|239414 cd03161, TM4SF2_6_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 10/81 (12%)

Query: 117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFN 176
           FVF H I+ T   ++ E + +   DD     + D  Q+   CCG   E Y DW  + YF 
Sbjct: 1   FVFRHEIKGTFLRTYNEAVSNYNGDDERSDAV-DTVQRTLHCCG--VENYTDWLNSPYF- 56

Query: 177 CSSPSVEKCGVPFSCCINATD 197
                  + G+P SCC N +D
Sbjct: 57  ------LEKGIPLSCCKNRSD 71

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 2 (TM4SF2) or Tspan-7, transmembrane 4 superfamily 6 (TM4SF6) or Tspan-6, and related proteins. TM4SF2 has been identified as involved in some forms of X-linked mental retardation. Length = 104

>gnl|CDD|239408 cd03155, CD151_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), CD151_Like family

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 123 IQATLEESFTEKIIHMYRDDADLQ--NLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSP 180
           ++  L+ES    +   Y    +      +D  QQEF+CCG  S  Y DW  +E+ N +  
Sbjct: 7   LEDELKESLKRTMQENYGQSGEEALTLTVDELQQEFKCCG--SNNYTDWQDSEWINSNEA 64

Query: 181 SVEKCGVPFSCCI 193
           +     VP SCC 
Sbjct: 65  NGRL--VPDSCCK 75

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD151strongly associates with integrins, especially alpha3beta1, alpha6beta1, alpha7beta1, and alpha6beta4; it may play roles in cell-cell adhesion, cell migration, platelet aggregation, and angiogenesis. For example, CD151 is is involved in regulation of migration of neutrophils, endothelial cells, and various tumor cell lines; it associates specifically with laminin-binding integrins and strengthens alpha6beta1 integrin-mediated adhesion to laminin-1; CD151 also specifically attenuates adhesion-dependent activation of Ras and correspdonding downstream effects, and is involved in epithelial cell-cell adhesion as a modulator of PKC- and Cdc42-dependent actin cytoskeletal reorganization. Length = 110

>gnl|CDD|239415 cd03162, peripherin_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), peripherin_like family

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 42/144 (29%), Positives = 57/144 (39%), Gaps = 37/144 (25%)

Query: 124 QATLEESFTEKI---IHMYRDDAD-----LQNLIDFAQQEFQCCGLSSEGYMDWSK---- 171
           + +LEES    +   +  Y+D        L+  ID  Q EFQCCG  + GY DW +    
Sbjct: 4   RGSLEESLKTGLKNAMKFYKDTDTPGRCFLKKTIDMLQIEFQCCG--NNGYRDWFEIQWI 61

Query: 172 -NEYFNCSSPSVEKC------------GVPFSCCINATDITSGLVNIMCGYGAQQSSGVL 218
            N Y + SS  V+              GVPFSCC    + +S    I      Q +    
Sbjct: 62  SNRYLDFSSKEVKDRIKSNVDGRYLTDGVPFSCC----NPSSPRPCIQ----HQITDNSA 113

Query: 219 RYGQLPQVAEASKKVWTSGCIEVM 242
            Y    Q       +WT GC E +
Sbjct: 114 HYNYDYQ--TEELNLWTRGCREAL 135

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Peripherin, or RDS (retinal degradation slow) is a glycoprotein expressed in vertebrate photoreceptors, located at the rim of the disc membranes of the photoreceptor outer segments. RDS is thought to play a major role in folding and stacking of the discs. Mutations in RDS have been linked to hereditary retinal dystrophies, which typically exhibit a wide phenotypic spectrum. Length = 143

>gnl|CDD|239407 cd03154, TM4SF3_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF3_like subfamily

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 114 VIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNE 173
           ++G V+   I+  L+E  T+ +  + ++   ++  ++  Q+E +CCGL   G  DW  + 
Sbjct: 2   IVGAVYKPKIENELKEKNTKLLSLLGQNAKSVKKSLEKFQKELKCCGL-VNGADDWGNDI 60

Query: 174 YFNCSSPSVEKCGVPFSC 191
             +C+  + +   V    
Sbjct: 61  PASCNCTTTQSDCVVAYY 78

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 3 (TM4SF3) or D6.1a and related proteins. D6.1a associates with alpha6beta4 integrin and supports cell motility, it has been ascribed a role in tumor progression and metastasis. Length = 100

>gnl|CDD|239417 cd03164, CD53_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 27/137 (19%), Positives = 41/137 (29%), Gaps = 52/137 (37%)

Query: 117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFN 176
           FV+   +   ++E  T+ +   Y  D +     D  Q   QCCG++  G  DW       
Sbjct: 1   FVYEKKLNNYVKEGLTDSL-EQYHKDNNTSEAWDMIQSNLQCCGIN--GTTDWGS----- 52

Query: 177 CSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTS 236
                    GVP SCC + T+                                       
Sbjct: 53  ---------GVPSSCCSSDTE-----------------------------------YKVE 68

Query: 237 GCIEVMRLWAERNLYTI 253
           GC + ++ W E N    
Sbjct: 69  GCYKKLKNWFESNFLYT 85

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD53 is a tetraspanin of the lymphoid-myeloid lineage and has been implicated in apoptosis protection. It associates with integrin alpha4beta1. Some of the cellular responses modulated by CD53 may be mediated by JNK activation and/or via the AKT pathway. Length = 86

>gnl|CDD|239418 cd03165, NET-5_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 32/135 (23%), Positives = 48/135 (35%), Gaps = 38/135 (28%)

Query: 117 FVFPHHIQATLEESFTEKIIHMYRDDAD-LQNLIDFAQQEFQCCGLSSEGYMDWSKNEYF 175
           FVF   +  T ++   E +      +   L N  D  Q EF+CCG+++  Y DW   E  
Sbjct: 1   FVFREKVDLTAKDDLKEGLELYGTRNNRGLTNAWDITQTEFRCCGVTN--YTDW--YEVL 56

Query: 176 NCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWT 235
             +        VP SCC                   + S    R          ++  W 
Sbjct: 57  GENR-------VPDSCCQ------------------EDSQDCGR--------NPTELWWK 83

Query: 236 SGCIEVMRLWAERNL 250
           +GC E ++ W   NL
Sbjct: 84  TGCYEKVQQWLVDNL 98

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human tetraspan NET-5. Length = 98

>gnl|CDD|239413 cd03160, CD37_CD82_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 12/94 (12%)

Query: 133 EKIIHMYR---DDADLQNLIDFAQQEFQCCGLSSEGYMDWSKN-EYFNCSSPSVEKCGVP 188
           EK+I  Y    ++   +   D+ Q + QCCG    G  DW+ N    N S P       P
Sbjct: 17  EKVIQNYGGNPENKTAEEAWDYVQFQLQCCG--WTGPQDWTDNSLIKNSSEPL-----YP 69

Query: 189 FSCCINATDITSGLVNI-MCGYGAQQSSGVLRYG 221
            SCC ++    S   +   C   A     V + G
Sbjct: 70  CSCCNSSATADSPRPSKGFCEAPASLDWPVYQEG 103

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD37 is a leukocyte-specific protein, and its restricted expression pattern suggests a role in the immune system. A regulatory role in T-cell proliferation has been suggested. CD82 is a metastasis suppressor implicated in biological processes ranging from fusion, adhesion, and migration to apoptosis and alterations of cell morphology. Length = 117

>gnl|CDD|239409 cd03156, uroplakin_I_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 3/55 (5%)

Query: 139 YRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCI 193
                 + +  +    E +CCG++  G  D+  +  F            P SCC 
Sbjct: 25  NSTGDAITSTWNRVMIELKCCGVN--GPTDFVDSTSFFRQKNE-PNSPYPESCCK 76

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Uroplakin Ia and Ib are components of the 16nm protein particles, which are packed hexagonally to form 2D crystals of asymmetric unit membranes, and cover the apical surface of mammalian urothelium, contributing to the urinay bladder's permeability barrier function. Uroplakins Ia and Ib are maturation facilitators. They trigger conformational changes in their single-transmembrane-domain binding partner proteins uroplakin II and IIIa, which in turn may lead to ER-exit, stabilization, and cell-surface expression. Length = 114

>gnl|CDD|239416 cd03163, TM4SF8_like_LEL, Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 116 GFVFPHHIQATLEESFTEKIIHMYRDDADLQNL-IDFAQQEFQCCGLSSEGYMDWSKNEY 174
           G+V+   ++  L  S  +  +    +  + ++  +D+ Q++ QCCG+ +  Y DW    +
Sbjct: 1   GYVYRAKVEDELNPSIDK--VFNKYNGTNAESRAVDYLQRQLQCCGIHN--YTDWENTPW 56

Query: 175 FNCSSPSVEKCGVPFSCC-INATDITSGLVNIM 206
           F       +   VP SCC    T  T  L    
Sbjct: 57  FK----ESKNNSVPLSCCKETFTSCTGSLTQPK 85

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 8 (TM4SF8) or Tspan-3 and related proteins. Tspan-3 has been reported to form a complex with integrin beta1 and OSP/claudin-11, which may be involved in oligodendrocyte proliferation and migration. Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	269
KOG3882|consensus	237		100.0
PF00335	221	Tetraspannin: Tetraspanin family RDS_ROM1 subfamil	99.96
cd03158	119	penumbra_like_LEL Tetraspanin, extracellular domai	99.82
cd03159	121	TM4SF9_like_LEL Tetraspanin, extracellular domain	99.82
cd03167	120	oculospanin_like_LEL Tetraspanin, extracellular do	99.81
cd03163	105	TM4SF8_like_LEL Tetraspanin, extracellular domain	99.8
cd03166	99	CD63_LEL Tetraspanin, extracellular domain or larg	99.78
cd03161	104	TM4SF2_6_like_LEL Tetraspanin, extracellular domai	99.78
cd03162	143	peripherin_like_LEL Tetraspanin, extracellular dom	99.76
cd03155	110	CD151_like_LEL Tetraspanin, extracellular domain o	99.76
cd03164	86	CD53_like_LEL Tetraspanin, extracellular domain or	99.76
cd03160	117	CD37_CD82_like_LEL Tetraspanin, extracellular doma	99.76
cd03154	100	TM4SF3_like_LEL Tetraspanin, extracellular domain	99.75
cd03156	114	uroplakin_I_like_LEL Tetraspanin, extracellular do	99.75
cd03165	98	NET-5_like_LEL Tetraspanin, extracellular domain o	99.72
cd03127	90	tetraspanin_LEL Tetraspanin, extracellular domain	99.65
cd03157	103	TM4SF12_like_LEL Tetraspanin, extracellular domain	99.65
cd03152	84	CD9_LEL Tetraspanin, extracellular domain or large	99.6
cd03151	84	CD81_like_LEL Tetraspanin, extracellular domain or	99.25
PF06770	196	Arif-1: Actin-rearrangement-inducing factor (Arif-	92.3
KOG4433|consensus	526		88.76
PRK12585	197	putative monovalent cation/H+ antiporter subunit G	82.83
PF04103	150	CD20: CD20-like family; InterPro: IPR007237 This f	81.89
cd07912	418	Tweety_N N-terminal domain of the protein encoded	81.86
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	81.84

>KOG3882|consensus

Probab=100.00  E-value=5.4e-42  Score=293.41  Aligned_cols=216  Identities=39%  Similarity=0.769  Sum_probs=185.3

Q ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHHHhhhheeEeccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy8209          10 FTYVSPCVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALR   89 (269)
Q Consensus        10 ~~~~~~~~k~~l~~~N~l~~l~G~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~G~~~~~~~~~G~~ga~~   89 (269)
                      +.++.+|+|++++++|+++++.|++++++|+|++.+.   ..+.++.+ .+ +..++++++++|++++++|++||+||.|
T Consensus         2 ~~~~~~~~K~~lf~~N~~~~l~G~~ll~~giw~~~~~---~~~~~~~~-~~-~~~~~~ili~~G~v~~~v~flGc~Ga~~   76 (237)
T KOG3882|consen    2 MSCGSSCLKYLLFLLNLLFWLLGLLLLAVGIWLLADK---GFLSSLLE-SD-FLVPAYILIAVGGVVFLVGFLGCCGALR   76 (237)
T ss_pred             CCcccchHHHHHHHHHHHHHHHHHHHHHhhhheeEec---cchhhccc-cc-hhcchhhhhhhhHHHHHHHHhhhhhhHh
Confidence            5678899999999999999999999999999999988   44444331 11 4668889999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHhHhCCChhHHHHHHHHhhcCccccccCCCCCCC
Q psy8209          90 ENTCLLKFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDW  169 (269)
Q Consensus        90 ~~~~lL~~y~~ll~il~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw  169 (269)
                      ||||+|.+|++++++++++|++++++++++++++++.+++++.++.++.|+++++.+++||.+|++++|||++  ||+||
T Consensus        77 es~~lL~~y~~~l~l~~i~e~~~~i~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~d~~Q~~~~CCG~~--~~~~~  154 (237)
T KOG3882|consen   77 ESRCLLLSYFILLLLLFIAELAAGILAFVFRDSLRDELEEQLLKSIWNNYSSDPDLGEAWDKLQRELKCCGVN--GYSDY  154 (237)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhheeHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHhccCCcCC--CchHH
Confidence            9999999999999999999999999999999999999965788899999998888888999999999999999  99998


Q ss_pred             cccccCCCCCCCCCCCcccccCccccccCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHh
Q psy8209         170 SKNEYFNCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERN  249 (269)
Q Consensus       170 ~~~~~~~~~~~~~~~~~vP~SCC~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~  249 (269)
                      .+..          ...+|+|||....+       +.+.                  ...+..+|++||.+++.++++++
T Consensus       155 ~~~~----------~~~vP~SCC~~~~~-------~~~~------------------~~~~~~~~~~GC~~~~~~~~~~~  199 (237)
T KOG3882|consen  155 FNCS----------SNNVPPSCCKRTRR-------QKFP------------------QDVPDNIYTEGCLEKLSSWLESN  199 (237)
T ss_pred             hcCC----------CCCCCcccCCCccc-------cccc------------------ccchhhhhccccHHHHHHHHHHh
Confidence            7531          00199999984110       1111                  12336789999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhc
Q psy8209         250 LYTIAGVALGVALSQVRY  267 (269)
Q Consensus       250 ~~~v~~~~~~i~~~qi~~  267 (269)
                      +.++++++++++++|++.
T Consensus       200 ~~~i~~~~~~i~~~~~~~  217 (237)
T KOG3882|consen  200 LLIIGGVGLGIAVLELLG  217 (237)
T ss_pred             hHHHHHHHHHHHHHHHHH
Confidence            999999999999999875

>PF00335 Tetraspannin: Tetraspanin family RDS_ROM1 subfamily; InterPro: IPR018499 A number of eukaryotic CD antigens have been shown to be related []

Probab=99.96  E-value=4.7e-30  Score=214.91  Aligned_cols=210  Identities=30%  Similarity=0.654  Sum_probs=55.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhheeEeccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q psy8209          16 CVKYMIFLLNFIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLL   95 (269)
Q Consensus        16 ~~k~~l~~~N~l~~l~G~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~G~~~~~~~~~G~~ga~~~~~~lL   95 (269)
                      |+|++++++|++++++|++++++|+|++...   .......  .+......++++.+|+++++++++|++|+.++||+++
T Consensus         1 c~k~~l~~~n~l~~l~g~~li~~g~~~~~~~---~~~~~~~--~~~~~~~~~~~i~~G~~~~~~~~~G~~~~~~~~~~~l   75 (221)
T PF00335_consen    1 CLKYILFFLNVLFLLLGLALIGVGIWLLVNN---QYLSEFS--SSFISYVIIILIFIGIFILIISFLGCIGACRKNRCLL   75 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhccccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence            7899999999999999999999999994222   1111111  1223445667788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHhHhCCChhHHHHHHHHhhcCccccccCCCCCCCcccccC
Q psy8209          96 KFYSLCLLIFFLLEMLVAVIGFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYF  175 (269)
Q Consensus        96 ~~y~~ll~il~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~  175 (269)
                      .+|.++++++++++++++++++.+++++++..++.......+.+..++..++.||.+|++++|||++  +++||....|.
T Consensus        76 ~~y~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iq~~~~CCG~~--~~~d~~~~~~~  153 (221)
T PF00335_consen   76 IIYIILLILLFVLELVVGIVAFSYRDQLNSSLKDGLSLRCMKSYNSNESFSEAWDNIQEKFECCGVN--SPDDWFTSKWS  153 (221)
T ss_dssp             ------------------------HHHHHHHHHHHHHHHHHHSSTT-CHHHHHHHHHHHHHT--SST--TCHHHHHHHHH
T ss_pred             cccccchhhHHHHHHHHHHhhhhccccccccccccccchhhhccccccchhhheecccccccccCCC--CCccccccccc
Confidence            9999999999999999999999999998887744432233445556677889999999999999999  99999876543


Q ss_pred             CCCCCCCCCCcccccCccccccCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhHHHHHH
Q psy8209         176 NCSSPSVEKCGVPFSCCINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIAG  255 (269)
Q Consensus       176 ~~~~~~~~~~~vP~SCC~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~~~v~~  255 (269)
                      ..+        .|++|... ..         + .                ...+....|.+||.+++.++++++...+++
T Consensus       154 ~~~--------~~~~~~~~-~~---------~-~----------------~~~~~~~~~~~gC~~~l~~~~~~~~~~~~~  198 (221)
T PF00335_consen  154 SCS--------SPDSCPDC-QC---------P-D----------------DCSSENSIYTRGCYDKLREYLRSYLKYIGI  198 (221)
T ss_dssp             T-----------------T-CS-----------T----------------TCCCCHCCTST-HHHHHHHHHCT-------
T ss_pred             ccc--------cccccccc-cc---------c-c----------------cccccccccCCChHHHHHHHHHHHHHHHHH
Confidence            321        11111100 00         0 0                012235678999999999999999999999


Q ss_pred             HHHHHHHHHhhc
Q psy8209         256 VALGVALSQVRY  267 (269)
Q Consensus       256 ~~~~i~~~qi~~  267 (269)
                      ++++++++|++.
T Consensus       199 ~~~~~~~l~~~~  210 (221)
T PF00335_consen  199 VSLAILVLQLIG  210 (221)
T ss_dssp             ------------
T ss_pred             HHHHHHHHHHHH
Confidence            999999988765

CD9 (also called DRAP-27, MRP-1 or p24) upregulates HB-EGF activity as a receptor for diphtheria toxin as well as its juxtacrine activity. CD9 mAbs modulate cell adhesion and migration and trigger platelet activation that is blocked by mAbs directed to the platelet Fc receptor CD32. In mice, CD9 mAb KMC8.8 has been shown to inhibit the production of myeloid cells in vitro and has a costimulatory activity for T cells. CD9 is a type III membrane protein, with four putative transmembrane domains. CD37 (or gp52-40) is involved in signal transduction and serves as a stable marker for malignancies derived from mature B cells, like B-CLL, HCL, and all types of B-NHL. CD63 transfection reduced melanoma cell motility on fibronectin, collagen and laminin, and reduced the growth and metastasis of melanoma cells in nude mice []. CD63 has been used as a marker for late endosomes and for primary melanomas. These proteins are all type II membrane proteins: they contain an N-terminal transmembrane (TM) domain, which acts both as a signal sequence and a membrane anchor, and 3 additional TM regions (hence the name 'TM4'). The sequences contain a number of conserved cysteine residues. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0016021 integral to membrane; PDB: 1IV5_A 1G8Q_A.

>cd03158 penumbra_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), penumbra_like family

Probab=99.82  E-value=4.1e-20  Score=141.56  Aligned_cols=119  Identities=56%  Similarity=1.068  Sum_probs=82.7

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhCCChhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCccccc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINAT  196 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~~  196 (269)
                      |++++++++.+++.+. +.++.|..+...+.+||.+|.+|+|||++  +|+||.++.|++.+++..+...||.|||....
T Consensus         1 ~v~r~~v~~~i~~~l~-~~i~~y~~~~~~~~~~d~lQ~~l~CCG~~--~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~~   77 (119)
T cd03158           1 FIFSNQTIDLLEENIR-KAIVHYYDDLDLQNIIDFVQKEFKCCGGD--DYRDWSKNMYFNCSSPNPEACGVPYSCCIRAK   77 (119)
T ss_pred             CCcHHHHHHHHHHHHH-HHHHHHccCHHHHHHHHHHHHHccCCCCC--ChhhcccccccccCCCCCcCCCcCcCcccCCC
Confidence            4688999999866555 66677776667889999999999999999  99999988777543222223469999997432


Q ss_pred             cCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhH
Q psy8209         197 DITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNL  250 (269)
Q Consensus       197 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~  250 (269)
                      .+  ......|+.......          .......+|.+||.+++.+|+++|+
T Consensus        78 ~~--~~~~~~C~~~~~~~~----------~~~~~~~i~~~GC~~~i~~~~~~n~  119 (119)
T cd03158          78 DQ--EVINTMCGYGVQNLE----------RLEASKLIYTRGCIDAVVLWIEDNL  119 (119)
T ss_pred             Cc--cccccCcCCCccccc----------chhhcCcccccchHHHHHHHHHhhC
Confidence            11  011245754321100          0122357899999999999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Human Penumbra exhibits growth-suppressive activity in vitro and has been associated with myeloid malignancies.

>cd03159 TM4SF9_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily

Probab=99.82  E-value=4e-20  Score=142.03  Aligned_cols=119  Identities=46%  Similarity=0.955  Sum_probs=82.0

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhCCChhHHHHHHHHhhcCccccccCCCCCCCcccccCCCC--CCCCCCCcccccCccc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCS--SPSVEKCGVPFSCCIN  194 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~--~~~~~~~~vP~SCC~~  194 (269)
                      |++++++++.+++.+. +.++.|..+++.+++||.+|++|+|||++  +|+||..+.|++..  ++..+...||.|||..
T Consensus         1 ~v~r~~v~~~i~~~l~-~~i~~y~~~~~~~~~~D~iQ~~l~CCG~~--~~~DW~~~~~~~~~~~~~~~~~~~vP~SCC~~   77 (121)
T cd03159           1 FVFKDWIKDQLTEFLN-NNIRAYRDDIDLQNLIDFLQEYWQCCGAR--GPDDWNLNIYFNCTDSNPSRERCGVPFSCCVK   77 (121)
T ss_pred             CccHHHHHHHHHHHHH-HHHHHhccCHHHHHHHHHHHHhccCCCCC--ChHHhcccccccccCCCCCCCCCCCCcccccC
Confidence            4788999999966555 66777877777889999999999999999  99999877777532  1222234699999973


Q ss_pred             cccCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhH
Q psy8209         195 ATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNL  250 (269)
Q Consensus       195 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~  250 (269)
                      ..  .....+..|+......+          .......+|.+||.+++.+|+++|+
T Consensus        78 ~~--~~~~~~~~C~~~~~~~~----------~~~~~~~i~~~GC~~~l~~~~~~n~  121 (121)
T cd03159          78 DP--AEDVVNTQCGYDVRKKP----------ELELQHHIHTKGCVQAFEKWLQDNL  121 (121)
T ss_pred             Cc--ccccccCccCccccccc----------cccccCCchHhhCHHHHHHHHHhcC
Confidence            21  10111345754221000          0012356899999999999999873

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 9 (TM4SF9) or Tetraspanin-5 and related proteins. TM4SF9 is strongly expressed witin the central nervous system, and expression levels appear to correlate with differentiation status of particular neurons, hinting at a role in neuronal maturation.

>cd03167 oculospanin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), oculospanin_like family

Probab=99.81  E-value=8.6e-20  Score=139.95  Aligned_cols=119  Identities=42%  Similarity=0.778  Sum_probs=81.8

Q ss_pred             hchhhHHHHHHHHHHHHHHhHhCCChhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCcccccc
Q psy8209         118 VFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINATD  197 (269)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~~~  197 (269)
                      ++++++++.+++.+. +.++.|..+++.+.+||.+|++|+|||++  +|+||..+.|++.+.++.+...||.|||.....
T Consensus         2 ~~r~~v~~~i~~~l~-~~i~~y~~~~~~~~~~d~iQ~~l~CCG~~--~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~~~   78 (120)
T cd03167           2 ALWGPLQDGLEHTLR-LAIAHYQDDPDLRFLIDQVQLGLQCCGAS--SYQDWQQNLYFNCSSPGVQACSLPASCCIDPRE   78 (120)
T ss_pred             ccHHHHHHHHHHHHH-HHHHHhcCChhHHHHHHHHHHhccCCCCC--ChHHhcccccccCCCCCCCCCCCCcCccCCCcc
Confidence            478888888855554 66677876667788999999999999999  999998777776443444455799999973211


Q ss_pred             CCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhH
Q psy8209         198 ITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNL  250 (269)
Q Consensus       198 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~  250 (269)
                      .. ...+..|+.......          .......+|.+||.+++.+++++|+
T Consensus        79 ~~-~~~~~~C~~~~~~~~----------~~~~~~~iy~~GC~~~l~~~~~~n~  120 (120)
T cd03167          79 DG-AVVNDQCGFGALGLD----------EDAAQRVVHLGGCGPPLRRWLRGNL  120 (120)
T ss_pred             cc-ccccCCCCCCccccc----------cchhcccchhccCHHHHHHHHHhcC
Confidence            00 011246764321100          0012256899999999999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contains sequences similar to oculospanin, which is found to be expressed in retinal pigment epithelium, iris, ciliary body, and retinal ganglion cells.

>cd03163 TM4SF8_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily

Probab=99.80  E-value=7.9e-20  Score=136.83  Aligned_cols=104  Identities=25%  Similarity=0.629  Sum_probs=78.2

Q ss_pred             HhhchhhHHHHHHHHHHHHHHhHhCCChhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCcccc
Q psy8209         116 GFVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINA  195 (269)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~  195 (269)
                      +|++++++++.+++.+ ++.++.|+.++..+.+||.+|++|+|||++  +|+||.++.|++.++    ...||.|||...
T Consensus         1 ~~v~~~~v~~~~~~~~-~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~--~~~Dw~~~~~~~~~~----~~~vP~SCC~~~   73 (105)
T cd03163           1 GYVYRAKVEDELNPSI-DKVFNKYNGTNAESRAVDYLQRQLQCCGIH--NYTDWENTPWFKESK----NNSVPLSCCKET   73 (105)
T ss_pred             CcccHHHHHHHHHHHH-HHHHHHhcCCcHHHHHHHHHHHhCcccCCC--CHHHHhhchhhhcCC----CCccCcCccCCC
Confidence            3678999999985555 467777876667789999999999999999  999998776654321    235999999732


Q ss_pred             ccCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhH
Q psy8209         196 TDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNL  250 (269)
Q Consensus       196 ~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~  250 (269)
                              ...|+...                .....+|.+||.+++.+++++++
T Consensus        74 --------~~~C~~~~----------------~~~~~i~~~GC~~~~~~~~~~~~  104 (105)
T cd03163          74 --------FTSCTGSL----------------TQPKDLYQEGCEAKLVKKLQEVM  104 (105)
T ss_pred             --------CCCcccCC----------------CCCCchhhhccHHHHHHHHHHHh
Confidence                    23464311                12246899999999999999885

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 8 (TM4SF8) or Tspan-3 and related proteins. Tspan-3 has been reported to form a complex with integrin beta1 and OSP/claudin-11, which may be involved in oligodendrocyte proliferation and migration.

>cd03166 CD63_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD63 family

Probab=99.78  E-value=3.3e-19  Score=132.01  Aligned_cols=99  Identities=29%  Similarity=0.743  Sum_probs=74.4

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhCCChhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCccccc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINAT  196 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~~  196 (269)
                      |++++++++.+++.+. +.++.|..+.+.+++||.+|++|+|||++  +|+||.++.+..       ...||.|||.+. 
T Consensus         1 ~v~r~~v~~~i~~~l~-~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~--~~~Dw~~~~~~~-------~~~vP~SCC~~~-   69 (99)
T cd03166           1 YVFRDKVMSEFNDSFN-QMISNYNKTNDFRKILDRMQKDLKCCGAN--NYTDWENIPSLD-------TDSVPDSCCINV-   69 (99)
T ss_pred             CCchHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHhcccCCC--ChhhhhcccCCC-------CCCCCcCccCcC-
Confidence            4688999998855554 66777877667888999999999999999  999997643211       235999999732 


Q ss_pred             cCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhH
Q psy8209         197 DITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNL  250 (269)
Q Consensus       197 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~  250 (269)
                             ...|+...                 ....+|.+||.+++.+++++++
T Consensus        70 -------~~~C~~~~-----------------~~~~~y~~GC~~~~~~~~~~~~   99 (99)
T cd03166          70 -------TKGCGINF-----------------DEKVIHLEGCVTKIEGWLKKNI   99 (99)
T ss_pred             -------CCCcccCC-----------------CccchHHhcCHHHHHHHHHHhC
Confidence                   23575311                 1246899999999999999873

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD63 is present in platelets, neutrophils, and endothelial cells, amongst others. In platelets it associates with the integrin alphaIIBbeta3 and may modulate alphaIIbbeta3-dependent cytoskeletal reorganization.

>cd03161 TM4SF2_6_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily

Probab=99.78  E-value=5.1e-19  Score=132.10  Aligned_cols=104  Identities=31%  Similarity=0.750  Sum_probs=76.1

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhCCChhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCccccc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINAT  196 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~~  196 (269)
                      |++++++++.+++.+ ++.++.|.++++.+.+||.+|++|+|||++  +|+||.++.|++       ...||.|||.+. 
T Consensus         1 ~v~r~~i~~~l~~~l-~~~i~~y~~~~~~~~~~d~iQ~~l~CCG~~--~~~Dw~~~~~~~-------~~~vP~SCC~~~-   69 (104)
T cd03161           1 FVFRHEIKGTFLRTY-NEAVSNYNGDDERSDAVDTVQRTLHCCGVE--NYTDWLNSPYFL-------EKGIPLSCCKNR-   69 (104)
T ss_pred             CCchHHHHHHHHHHH-HHHHHHhcCChhHHHHHHHHHhcCcCcCCC--Chhhhhcccccc-------CCCcCcccccCC-
Confidence            468899998885555 467778887777788999999999999999  999998766653       125999999731 


Q ss_pred             cCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhH
Q psy8209         197 DITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNL  250 (269)
Q Consensus       197 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~  250 (269)
                              ..|+......           .......+|.+||.+++.+++++++
T Consensus        70 --------~~C~~~~~~~-----------~~~~~~~i~~~GC~~~~~~~~~~n~  104 (104)
T cd03161          70 --------SDCSPQDLKN-----------LTKAATKVYQQGCFTLVTSFMEANM  104 (104)
T ss_pred             --------CCCCcccccc-----------ccccccccchhccHHHHHHHHHHhC
Confidence                    2464321100           0012256899999999999999873

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 2 (TM4SF2) or Tspan-7, transmembrane 4 superfamily 6 (TM4SF6) or Tspan-6, and related proteins. TM4SF2 has been identified as involved in some forms of X-linked mental retardation.

>cd03162 peripherin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), peripherin_like family

Probab=99.76  E-value=1.1e-18  Score=136.33  Aligned_cols=119  Identities=29%  Similarity=0.611  Sum_probs=80.7

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhCCCh-----hHHHHHHHHhhcCccccccCCCCCCCcccccC-----CCCCCCC----
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYRDDA-----DLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYF-----NCSSPSV----  182 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~~~~-----~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~-----~~~~~~~----  182 (269)
                      |++++++++.+++.+ ++.++.|++++     +.+++||.+|++|+|||++  +|+||.++.|+     +++++..    
T Consensus         1 fv~rd~l~~~L~~~L-~~~i~~Y~~~~~~~~~~~~~~~D~lQ~~fkCCG~~--~y~DW~~~~w~~n~y~~~~~~~~~~~~   77 (143)
T cd03162           1 FIMRGSLEESLKTGL-KNAMKFYKDTDTPGRCFLKKTIDMLQIEFQCCGNN--GYRDWFEIQWISNRYLDFSSKEVKDRI   77 (143)
T ss_pred             CCcHHHHHHHHHHHH-HHHHHHhcCCcccchhhHHHHHHHHHHhccCCCCC--ChhhhhhhhhhcccccCCCccchhhhh
Confidence            468899999885555 46677787653     5789999999999999999  99999865554     4433322    


Q ss_pred             --------CCCcccccCccccccCCCcccccccCCCcccCC-cccccCCCccccccCCceeccccHHHHHHHHHHh
Q psy8209         183 --------EKCGVPFSCCINATDITSGLVNIMCGYGAQQSS-GVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERN  249 (269)
Q Consensus       183 --------~~~~vP~SCC~~~~~~~~~~~~~~C~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~  249 (269)
                              +...||.|||....       ...|........ -+..|...    +....+|++||.+++.+|+.+.
T Consensus        78 ~~~~~~~~~~~~vP~SCc~~~~-------~~~C~~~~~~~~~a~~~~~~~----~~~~~i~~~GC~~~l~~~~~~~  142 (143)
T cd03162          78 KSNVDGRYLTDGVPFSCCNPSS-------PRPCIQHQITDNSAHYNYDYQ----TEELNLWTRGCREALLEYYTSK  142 (143)
T ss_pred             hcccccccccCCcCCcccCCCC-------CCchhhhcccccccccccccC----cccccchHHHHHHHHHHHHHhc
Confidence                    34579999998432       135643211100 01122222    2346899999999999999764

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Peripherin, or RDS (retinal degradation slow) is a glycoprotein expressed in vertebrate photoreceptors, located at the rim of the disc membranes of the photoreceptor outer segments. RDS is thought to play a major role in folding and stacking of the discs. Mutations in RDS have been linked to her

>cd03155 CD151_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD151_Like family

Probab=99.76  E-value=2.2e-18  Score=130.08  Aligned_cols=105  Identities=28%  Similarity=0.608  Sum_probs=74.2

Q ss_pred             hhchhhHHHHHHHHHHHHHHhH-hCCC--hhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCcc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHM-YRDD--ADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCI  193 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~-y~~~--~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~  193 (269)
                      |++++++++.+++.+. +.++. |+.+  ++.+.+||.+|++|+|||++  +|+||.++.|++..  ......||.|||.
T Consensus         1 ~v~~~~~~~~i~~~l~-~~i~~~y~~~~~~~~~~~~d~iQ~~l~CCG~~--~~~Dw~~~~~~~~~--~~~~~~vP~SCC~   75 (110)
T cd03155           1 YTYYQQLEDELKESLK-RTMQENYGQSGEEALTLTVDELQQEFKCCGSN--NYTDWQDSEWINSN--EANGRLVPDSCCK   75 (110)
T ss_pred             CccHHHHHHHHHHHHH-HHHHHHcCCCCcHHHHHHHHHHHHhCcCcCCC--ChhhhhhccccccC--CCCCCCCCccccC
Confidence            4688999998866655 44444 6544  56788999999999999999  99999887766421  1113369999997


Q ss_pred             ccccCCCcccccccCCCcccCCcccccCCCccccccCCceec--cccHHHHHHHHHHhH
Q psy8209         194 NATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWT--SGCIEVMRLWAERNL  250 (269)
Q Consensus       194 ~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~GC~~~l~~~l~~~~  250 (269)
                      +.        ...|+...                .....+|.  +||.+++.+++++++
T Consensus        76 ~~--------~~~c~~~~----------------~~~~~~~~~~~GC~~~~~~~~~~~~  110 (110)
T cd03155          76 TV--------VDRCGCLR----------------DHPSNIYKVEGGCIPKLEDFLYDHL  110 (110)
T ss_pred             CC--------CCCccccc----------------CChhccccccCChHHHHHHHHHHhC
Confidence            42        12353100                11244677  999999999999873

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD151strongly associates with integrins, especially alpha3beta1, alpha6beta1, alpha7beta1, and alpha6beta4; it may play roles in cell-cell adhesion, cell migration, platelet aggregation, and angiogenesis. For example, CD151 is is involved in regulation of migration of neutrophils, endothelial cells, and

>cd03164 CD53_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family

Probab=99.76  E-value=1.4e-18  Score=125.40  Aligned_cols=86  Identities=29%  Similarity=0.716  Sum_probs=69.7

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhCCChhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCccccc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINAT  196 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~~  196 (269)
                      |++++++++.+++.+ ++.+++|.+++..+.+||.+|++|+|||++  +|+||.+              .+|+|||.+. 
T Consensus         1 ~v~~~~v~~~i~~~~-~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~--~~~Dw~~--------------~vP~SCC~~~-   62 (86)
T cd03164           1 FVYEKKLNNYVKEGL-TDSLEQYHKDNNTSEAWDMIQSNLQCCGIN--GTTDWGS--------------GVPSSCCSSD-   62 (86)
T ss_pred             CCchHHHHHHHHHHH-HHHHHHhcCCccHHHHHHHHHHHhcCCCCC--ChhhhCC--------------CCChhhcCCC-
Confidence            468889988885544 467777876555688999999999999999  9999952              3899999621 


Q ss_pred             cCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhHHHHH
Q psy8209         197 DITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNLYTIA  254 (269)
Q Consensus       197 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~~~v~  254 (269)
                                                        ..+|.+||.+++.+++++++.+++
T Consensus        63 ----------------------------------~~~~~~GC~~~~~~~~~~~~~iig   86 (86)
T cd03164          63 ----------------------------------TEYKVEGCYKKLKNWFESNFLYTG   86 (86)
T ss_pred             ----------------------------------CccccccHHHHHHHHHHHHHHHhC
Confidence                                              136889999999999999998763

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD53 is a tetraspanin of the lymphoid-myeloid lineage and has been implicated in apoptosis protection. It associates with integrin alpha4beta1. Some of the cellular responses modulated by CD53 may be mediated by JNK activation and/or via the AKT pathway.

>cd03160 CD37_CD82_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family

Probab=99.76  E-value=1.6e-18  Score=132.35  Aligned_cols=112  Identities=24%  Similarity=0.521  Sum_probs=76.9

Q ss_pred             HhhchhhHHHHHHHHHHHHHHhHhCC---ChhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCc
Q psy8209         116 GFVFPHHIQATLEESFTEKIIHMYRD---DADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCC  192 (269)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~y~~---~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC  192 (269)
                      +|++++++++.+++.+. +.++.|..   +++.+++||.+|++|+|||++  +|+||.++.|+...    ....||.|||
T Consensus         1 ~~v~r~~v~~~i~~~l~-~~i~~y~~~~~~~~~~~~~d~iQ~~l~CCG~~--~~~Dw~~~~~~~~~----~~~~vP~SCC   73 (117)
T cd03160           1 IYFQRDKLKQEMGDIVE-KVIQNYGGNPENKTAEEAWDYVQFQLQCCGWT--GPQDWTDNSLIKNS----SEPLYPCSCC   73 (117)
T ss_pred             CceeHHHHHHHHHHHHH-HHHHhcCCCCCCchHHHHHHHHHhhCcccCCC--CchhHHhchhccCC----CCCCCCHhhh
Confidence            36789999999865554 66777764   346788999999999999999  99999876655321    1235999999


Q ss_pred             cccccCC-CcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhH
Q psy8209         193 INATDIT-SGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNL  250 (269)
Q Consensus       193 ~~~~~~~-~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~  250 (269)
                      .+..... ..+....|+...                .....+|++||.+++.+|+++++
T Consensus        74 ~~~~~~~~~~~~~~~C~~~~----------------~~~~~iy~~GC~~~l~~~~~~n~  116 (117)
T cd03160          74 NSSATADSPRPSKGFCEAPA----------------SLDWPVYQEGCMEKLQSWLNENL  116 (117)
T ss_pred             cCCccccccCCCCcccCCCC----------------ccccchHHHhhHHHHHHHHHHhc
Confidence            7321100 001123464211                01245799999999999999885

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD37 is a leukocyte-specific protein, and its restricted expression pattern suggests a role in the immune system. A regulatory role in T-cell proliferation has been suggested. CD82 is a metastasis suppressor implicated in biological processes ranging from fusion, adhesion, and migration to apoptos

>cd03154 TM4SF3_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF3_like subfamily

Probab=99.75  E-value=1.6e-18  Score=128.57  Aligned_cols=99  Identities=24%  Similarity=0.434  Sum_probs=72.1

Q ss_pred             HHHHhhchhhHHHHHHHHHHHHHHhHhCCC-hhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccC
Q psy8209         113 AVIGFVFPHHIQATLEESFTEKIIHMYRDD-ADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSC  191 (269)
Q Consensus       113 ~i~~~~~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SC  191 (269)
                      ||++|++++++++.+++.+ ++.++.|+.+ .+.+++||.+|++|+|||++  ++.||...             .||.||
T Consensus         1 gi~~~v~r~~i~~~i~~~~-~~~i~~y~~~~~~~~~~~d~lQ~~l~CCG~~--~~~d~~~~-------------~vP~SC   64 (100)
T cd03154           1 GIVGAVYKPKIENELKEKN-TKLLSLLGQNAKSVKKSLEKFQKELKCCGLV--NGADDWGN-------------DIPASC   64 (100)
T ss_pred             CEEEEEeHHHHHHHHHHHH-HHHHHHcCCChHHHHHHHHHHHHcCCCCCCC--CchhhccC-------------CCCCCC
Confidence            4678999999999995555 4677777655 45788999999999999999  98887431             499999


Q ss_pred             ccccccCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhH
Q psy8209         192 CINATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNL  250 (269)
Q Consensus       192 C~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~  250 (269)
                      |+...        ..|.....               .....+|++||.+++.+++++++
T Consensus        65 cc~~~--------~~c~~~~~---------------~~~~~~~~~GC~~~i~~~~~~~~  100 (100)
T cd03154          65 NCTTT--------QSDCVVAY---------------YGGSNVYKEPCISKIKDFLKKNL  100 (100)
T ss_pred             cCCCC--------CCCccccc---------------CCCcCccccccHHHHHHHHHhhC
Confidence            64211        12321000               11246799999999999999873

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 3 (TM4SF3) or D6.1a and related proteins. D6.1a associates with alpha6beta4 integrin and supports cell motility, it has been ascribed a role in tumor progression and metastasis.

>cd03156 uroplakin_I_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family

Probab=99.75  E-value=1.8e-18  Score=131.11  Aligned_cols=111  Identities=17%  Similarity=0.306  Sum_probs=76.3

Q ss_pred             HhhchhhHHHHHHHHHHHHHHhHhCCC-hhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCccc
Q psy8209         116 GFVFPHHIQATLEESFTEKIIHMYRDD-ADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCIN  194 (269)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~  194 (269)
                      ++++++++++.+++.+. +.++.|..+ ++.+.+||.+|++|+|||++  +|+||.++.|+... .......||.|||..
T Consensus         2 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~d~iQ~~l~CCG~~--~~~Dw~~~~~~~~~-~~~~~~~vP~SCC~~   77 (114)
T cd03156           2 ALFFKKDLEDSFKNLLK-NNYGNYNSTGDAITSTWNRVMIELKCCGVN--GPTDFVDSTSFFRQ-KNEPNSPYPESCCKR   77 (114)
T ss_pred             hhHHHHHHHHHHHHHHH-HHHHhccccchHHHHHHHHHHhcccCcCCC--CcHHHHhhhHHhcc-CCCCCCcCCHHHcCc
Confidence            57889999998855554 666666543 56789999999999999999  99999887775421 111234699999973


Q ss_pred             cccCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHh
Q psy8209         195 ATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERN  249 (269)
Q Consensus       195 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~  249 (269)
                      ..  .... ...|...                ......+|++||.+++.++++++
T Consensus        78 ~~--~~~~-~~~~~~~----------------~~~~~~~~~~GC~~~l~~~~~~~  113 (114)
T cd03156          78 NS--NSQI-VDLDCPK----------------LGSPNSYNKKGCYEKLSNPIERY  113 (114)
T ss_pred             cc--cccc-ccccCCC----------------CCcchhhhhcCchHHHHHHHHhc
Confidence            21  0000 1122210                01235689999999999999876

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Uroplakin Ia and Ib are components of the 16nm protein particles, which are packed hexagonally to form 2D crystals of asymmetric unit membranes, and cover the apical surface of mammalian urothelium, contributing to the urinay bladder's permeability barrier function. Uroplakins Ia and Ib are ma

>cd03165 NET-5_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family

Probab=99.72  E-value=8.5e-18  Score=124.14  Aligned_cols=96  Identities=32%  Similarity=0.739  Sum_probs=70.7

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhCCC--hhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCccc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYRDD--ADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCIN  194 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~~~--~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~  194 (269)
                      |++++++++.+++.+ ++.++.|..+  +..+++||.+|++|+|||++  +|+||.++.  .       ...||.|||..
T Consensus         1 ~v~r~~~~~~i~~~l-~~~~~~y~~~~~~~~~~~~d~~Q~~l~CCG~~--~~~Dw~~~~--~-------~~~vP~SCC~~   68 (98)
T cd03165           1 FVFREKVDLTAKDDL-KEGLELYGTRNNRGLTNAWDITQTEFRCCGVT--NYTDWYEVL--G-------ENRVPDSCCQE   68 (98)
T ss_pred             CChHHHHHHHHHHHH-HHHHHHhCCCCcHHHHHHHHHHHHhCcCcCCC--ChhHHHHhc--C-------CCCCCHhhcCC
Confidence            467889988885554 4677778653  35788999999999999999  999997531  1       12599999963


Q ss_pred             cccCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhH
Q psy8209         195 ATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNL  250 (269)
Q Consensus       195 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~  250 (269)
                      .        ...|+..                  ....+|.+||.+++.+++++++
T Consensus        69 ~--------~~~C~~~------------------~~~~~~~~GC~~~~~~~~~~~~   98 (98)
T cd03165          69 D--------SQDCGRN------------------PTELWWKTGCYEKVQQWLVDNL   98 (98)
T ss_pred             C--------ccccccC------------------CccchHHhhhHHHHHHHHHhcC
Confidence            2        2357431                  1145799999999999998863

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human tetraspan NET-5.

>cd03127 tetraspanin_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL)

Probab=99.65  E-value=2.5e-16  Score=113.93  Aligned_cols=89  Identities=29%  Similarity=0.614  Sum_probs=67.6

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhCCChhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCccccc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYRDDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINAT  196 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~~  196 (269)
                      +++++++.+.+.+ .+++.+++|..++..+.+||.+|.+|+|||++  ||.||...           ...+|.|||....
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~iq~~l~CCG~~--~~~D~~~~-----------~~~vP~SCc~~~~   66 (90)
T cd03127           1 FVYRDQLESLVSD-TLNDAWDEYYVDDDFQEAMDALQSTFECCGVN--GPTDYLDL-----------RLLVPSSCCKGTD   66 (90)
T ss_pred             CCcHHHHHHHHHH-HHHHHHHHhcCCchHHHHHHHHHHhCcCcCCC--ChHHHccC-----------CCCCCHhhcCCCC
Confidence            3578888888844 44577777776566788999999999999999  99999751           1259999997321


Q ss_pred             cCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHh
Q psy8209         197 DITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERN  249 (269)
Q Consensus       197 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~  249 (269)
                              ..|.                      ..+|.+||.+++.++++++
T Consensus        67 --------~~~~----------------------~~~~~~GC~~~~~~~~~~~   89 (90)
T cd03127          67 --------GNCG----------------------LNLYTEGCLEKLVDFLRSN   89 (90)
T ss_pred             --------CCCc----------------------cchhhHccHHHHHHHHHhh
Confidence                    1121                      3578999999999999876

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. The tetraspanin family contains CD9, CD63, CD37, CD53, CD82, CD151, and CD81, amongst others. Tetraspanins are involved in diverse processes such as cell activation and proliferation, adhesion and motility, differentiation, cancer, and others. Their various functions may relate to their ability to act as molecular facilitators, grouping specific cell-surface proteins and affecting formation and stability of signaling complexes. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web", which may also include integr

>cd03157 TM4SF12_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family

Probab=99.65  E-value=4.2e-16  Score=115.80  Aligned_cols=89  Identities=21%  Similarity=0.347  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHhHhCCC-hh-HHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCccccccCCCccc
Q psy8209         126 TLEESFTEKIIHMYRDD-AD-LQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCINATDITSGLV  203 (269)
Q Consensus       126 ~~~~~~~~~~~~~y~~~-~~-~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~~~~~~~~~  203 (269)
                      .++..+. +.++.|+.+ .+ .+++||.+|++|+|||++  +|+||.++..         ...||.|||.+.        
T Consensus        11 ~~~~~l~-~~~~~Y~~~~~~~~~~~~D~iQ~~l~CCG~~--~~~DW~~~~~---------~~~vP~SCC~~~--------   70 (103)
T cd03157          11 SDMISLK-SRMSNFGLQRYQWLTHAWNSFQTEFKCCGVI--YFTDWLEMTE---------MEWPPDSCCSNQ--------   70 (103)
T ss_pred             HHHHHHH-HHHHHHCCCCchhHHHHHHHHHHhccCccCC--ChhHHhccCC---------CCCCCccccCCC--------
Confidence            4434443 566778763 22 688999999999999999  9999975421         124999999732        


Q ss_pred             ccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHH
Q psy8209         204 NIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAER  248 (269)
Q Consensus       204 ~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~  248 (269)
                      ...|+....              ......+|++||.+++.++++.
T Consensus        71 ~~~C~~~~~--------------~~~~~~iy~~GC~~~i~~~l~~  101 (103)
T cd03157          71 YPGCARQAH--------------YNDLSDLYQEGCGPKIYSFIRG  101 (103)
T ss_pred             CCCcCcCCC--------------CcccccccccchHHHHHHHHHh
Confidence            234753211              0112468999999999999975

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human transmembrane 4 superfamily member 12 (TM4SF12).

>cd03152 CD9_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD9 family

Probab=99.60  E-value=1.2e-15  Score=109.43  Aligned_cols=82  Identities=16%  Similarity=0.343  Sum_probs=63.2

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhCCC--hhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCccc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYRDD--ADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCIN  194 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~~~--~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~  194 (269)
                      |++++++++.+ ++.+++.++.|.++  +..+.+||.+|++|+|||++  +|.||.                ||.||++.
T Consensus         1 ~v~r~~v~~~i-~~~~~~~~~~y~~~~~~~~~~~~d~iQ~~l~CCG~~--~~~D~~----------------vP~SC~~~   61 (84)
T cd03152           1 FSNKDKVVKEV-QTFYRQTYAKYKQSRDPPLKETLKAIHFALDCCGPT--GGLEQF----------------VTDTCPKK   61 (84)
T ss_pred             CccHHHHHHHH-HHHHHHHHHHHhccCCHHHHHHHHHHHHHHcCCCCC--CCcccc----------------cCCCCCCC
Confidence            46889999888 44455777788763  35567999999999999999  999992                89998531


Q ss_pred             cccCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHhH
Q psy8209         195 ATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERNL  250 (269)
Q Consensus       195 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~~  250 (269)
                      .                                 ....+|.+||.+++.+++++++
T Consensus        62 ~---------------------------------~~~~~~~~gC~~~i~~~~~~~~   84 (84)
T cd03152          62 E---------------------------------GLENLITKSCPDAIDDVFNSKL   84 (84)
T ss_pred             C---------------------------------chhhhccCCCcHHHHHHHHccC
Confidence            1                                 0134578899999999998763

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD9 is found in virtually all tissues and is potentially involved in developmental processes. It associates with the tetraspanins CD81 and CD63, as well as with some integrin, and has been shown to be involved in a variety of activation, adhesion, and cell motility functions, as well as cell-cell interactions - such as

>cd03151 CD81_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD81_like subfamily

Probab=99.25  E-value=9.7e-12  Score=89.09  Aligned_cols=81  Identities=12%  Similarity=0.160  Sum_probs=61.9

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhCCC--hhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCccc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYRDD--ADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCIN  194 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~~~--~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~  194 (269)
                      |+++++++..+ .+.+++.++.|.++  ...+.+||.+|+.|+|||++  ||+|+..+             .+|.+|...
T Consensus         1 ~v~r~~v~~~i-~~~l~~~~~~y~~~~~~~~~~~~d~iQ~~l~CCG~~--~~~d~~~~-------------~~~~~C~~~   64 (84)
T cd03151           1 FINKDQIIKEV-QNFYDSAYQDAVTDTRSKGTAVLKTFHSTLDCCGKG--NLTALLSL-------------LSTDLCPKK   64 (84)
T ss_pred             CCcHHHHHHHH-HHHHHHHHHHHccCcchhHHHHHHHHHHhcCCCCCC--CCcchHHH-------------HHhCCCCCc
Confidence            46888998888 44556777888653  24677999999999999999  99998642             478888430


Q ss_pred             cccCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHh
Q psy8209         195 ATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERN  249 (269)
Q Consensus       195 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~  249 (269)
                                                          ...+.++|.+++.++++.+
T Consensus        65 ------------------------------------~~~~~~~C~~~i~~~~~~~   83 (84)
T cd03151          65 ------------------------------------LLLDTKDCHQEIDDLFSEK   83 (84)
T ss_pred             ------------------------------------cccCCCCccHHHHHHHhcc
Confidence                                                1146789999999999865

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD81, also referred to as Target for anti-proliferative antigen-1, TAPA-1, is found in virtually all tissues, may be involved in regulation of cell growth and has been described as a member of the CD19/CD21/Leu-13 signal transduction complex identified on B cells (the B-Cell co-receptor).

>PF06770 Arif-1: Actin-rearrangement-inducing factor (Arif-1); InterPro: IPR010639 This family consists of several Nucleopolyhedrovirus actin-rearrangement-inducing factor (Arif-1) proteins

Probab=92.30  E-value=0.75  Score=37.77  Aligned_cols=64  Identities=19%  Similarity=0.367  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHhhhheeEeccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccch
Q psy8209          26 FIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALREN   91 (269)
Q Consensus        26 ~l~~l~G~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~G~~~~~~~~~G~~ga~~~~   91 (269)
                      +++.+.|++.+++|+....+..- ....+.++. +.....+.++++.|..+++.++.|.++...+-
T Consensus         3 ~~~~v~g~~~~~~gl~G~~~~~y-Allldye~g-~~v~N~S~l~~vyG~~l~~~~~~~~~~~~~~~   66 (196)
T PF06770_consen    3 IILFVVGSAAFVFGLMGIVDERY-ALLLDYENG-SSVFNCSGLVFVYGPLLLLVTTWGVYKITSKM   66 (196)
T ss_pred             chhHHHHHHHHHHHhhheecCce-eeEEEecCC-CccEeehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556888888888888776521 111122221 11233344578999999999999887777543

In response to Autographa californica nuclear polyhedrosis virus (AcMNPV) infection, a sequential rearrangement of the actin cytoskeleton occurs this is induced by Arif-1 []. Arif-1 is tyrosine phosphorylated and is located at the plasma membrane as a component of the actin rearrangement-inducing complex [].

>KOG4433|consensus

Probab=88.76  E-value=3.5  Score=38.47  Aligned_cols=46  Identities=26%  Similarity=0.523  Sum_probs=33.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q psy8209          61 VILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIFFLL  108 (269)
Q Consensus        61 ~~~~~~~~li~~G~~~~~~~~~G~~ga~~~~~~lL~~y~~ll~il~~~  108 (269)
                      .+.++++++  +=.+.+++.++++.|.+|+|||.++.|.++=++.+++
T Consensus       207 ~~RW~~~v~--lL~l~LvvC~v~vlglak~Skc~li~fsv~Gll~lvi  252 (526)
T KOG4433|consen  207 SYRWLAYVL--LLTLLLVVCLVLVLGLAKRSKCLLIVFSVCGLLALVI  252 (526)
T ss_pred             HHHHHHHHH--HHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHH
Confidence            345555443  3346677888899999999999999998776655554

>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed

Probab=82.83  E-value=11  Score=30.82  Aligned_cols=26  Identities=23%  Similarity=0.317  Sum_probs=18.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhheeEec
Q psy8209          21 IFLLNFIFWLLGALLIAVGLYAFLDK   46 (269)
Q Consensus        21 l~~~N~l~~l~G~~li~~g~~~~~~~   46 (269)
                      +-++-.+|+++|..++.+|..-++..
T Consensus         5 ~eiI~~vLLliG~~f~ligaIGLlRf   30 (197)
T PRK12585          5 IEIIISIMILIGGLLSILAAIGVIRL   30 (197)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34455677788888888887766544

>PF04103 CD20: CD20-like family; InterPro: IPR007237 This family includes the CD20 protein and the beta subunit of the high affinity receptor for IgE Fc

Probab=81.89  E-value=0.44  Score=37.12  Aligned_cols=73  Identities=23%  Similarity=0.292  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHhhhheeEeccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q psy8209          26 FIFWLLGALLIAVGLYAFLDKWEASGLLKLETVYDVILNIALVLVILGAIIFIVSFAGCVGALRENTCLLKFYSLCLLIF  105 (269)
Q Consensus        26 ~l~~l~G~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~G~~~~~~~~~G~~ga~~~~~~lL~~y~~ll~il  105 (269)
                      ++-.++|+..+.+|+......   ..  ...     ...   .-+-.|++.++.|.+|..+..|.+|+++..+.++-++-
T Consensus         4 ~~qI~lGi~~i~lGi~~~~~~---~~--~~~-----~~~---~piW~G~~fiisG~l~i~s~k~~~~~lv~~~l~lsi~s   70 (150)
T PF04103_consen    4 VIQILLGILSIVLGIIALSLS---SS--VLV-----YIG---YPIWGGIFFIISGILGIASEKKPTKCLVIASLVLSIVS   70 (150)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---hH--HHH-----Hhc---ccHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHH
Confidence            345677888888887776544   11  000     011   12445778888999998888999999988888777666


Q ss_pred             HHHHHH
Q psy8209         106 FLLEML  111 (269)
Q Consensus       106 ~~~~i~  111 (269)
                      ++.-++
T Consensus        71 ~~~a~~   76 (150)
T PF04103_consen   71 ALLALA   76 (150)
T ss_dssp             ------
T ss_pred             HHHHHH
Confidence            555443

The high affinity receptor for IgE is a tetrameric structure consisting of a single IgE-binding alpha subunit, a single beta subunit, and two disulphide-linked gamma subunits. The alpha subunit of Fc epsilon RI and most Fc receptors are homologous members of the Ig superfamily. By contrast, the beta and gamma subunits from Fc epsilon RI are not homologous to the Ig superfamily. Both molecules have four putative transmembrane segments and a probably topology where both amino- and carboxy termini protrude into the cytoplasm []. This family also includes LR8 like proteins from humans, mice and rats. The function of the human LR8 protein is unknown although it is known to be strongly expressed in the lung fibroblasts []. This family also includes sarcospan is a transmembrane component of dystrophin-associated glycoprotein. Loss of the sarcoglycan complex and sarcospan alone is sufficient to cause muscular dystrophy. The role of the sarcoglycan complex and sarcospan is thought to be to strengthen the dystrophin axis connecting the basement membrane with the cytoskeleton []. ; GO: 0016021 integral to membrane; PDB: 2OSL_Q 3BKY_P 3PP4_P.

>cd07912 Tweety_N N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels

Probab=81.86  E-value=15  Score=34.22  Aligned_cols=31  Identities=16%  Similarity=0.101  Sum_probs=17.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q psy8209          97 FYSLCLLIFFLLEMLVAVIGFVFPHHIQATL  127 (269)
Q Consensus        97 ~y~~ll~il~~~~i~~~i~~~~~~~~~~~~~  127 (269)
                      .|.+.++++.++-.++.+.+|.-.+++.+.+
T Consensus        81 c~~~sLiiltL~~~aaIi~~f~GN~~~h~gV  111 (418)
T cd07912          81 CLKWSLVIATLLCCAAIGVGLYGNDETHDGV  111 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccHHHhhhH
Confidence            4555555544444444445666666666655

The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins.

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=81.84  E-value=14  Score=30.16  Aligned_cols=17  Identities=29%  Similarity=0.704  Sum_probs=10.0

Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy8209          67 LVLVILGAIIFIVSFAG   83 (269)
Q Consensus        67 ~~li~~G~~~~~~~~~G   83 (269)
                      .+.+++|+++++.|+.+
T Consensus         9 i~~iilgilli~~gI~~   25 (191)
T PF04156_consen    9 IILIILGILLIASGIAA   25 (191)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            34566666655555555

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	269
1g8q_A	90	CD81 antigen, extracellular domain; alpha helical,	99.68

>1g8q_A CD81 antigen, extracellular domain; alpha helical, immune system; 1.60A {Homo sapiens} SCOP: a.135.1.1 PDB: 1iv5_A

Probab=99.68  E-value=1.2e-17  Score=120.44  Aligned_cols=86  Identities=13%  Similarity=0.292  Sum_probs=65.6

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhC---CChhHHHHHHHHhhcCccccccCCCCCCCcccccCCCCCCCCCCCcccccCcc
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYR---DDADLQNLIDFAQQEFQCCGLSSEGYMDWSKNEYFNCSSPSVEKCGVPFSCCI  193 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~---~~~~~~~~~d~iQ~~l~CCG~~~~~~~Dw~~~~~~~~~~~~~~~~~vP~SCC~  193 (269)
                      |++++++++.+++ .+++.++.|.   .+++.+++||.+|++|+|||++  +|+||...             .||.|||.
T Consensus         1 fv~~~~v~~~l~~-~l~~~~~~y~~~~~~~~~~~~~d~iQ~~l~CCG~~--~~~Dw~~~-------------~vP~ScC~   64 (90)
T 1g8q_A            1 FVNKDQIAKDVKQ-FYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSS--TLTALTTS-------------VLKNNLCP   64 (90)
T ss_dssp             CCCHHHHHHHHHH-HHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCSCT--TCGGGHHH-------------HHHTTCSC
T ss_pred             CccHHHHHHHHHH-HHHHHHHHhccCCCchhHHHHHHHHHHhhcCCCCC--ChhhhccC-------------CCCCCCCC
Confidence            4688999988844 4457777763   3455788999999999999999  99999641             38999997


Q ss_pred             ccccCCCcccccccCCCcccCCcccccCCCccccccCCceeccccHHHHHHHHHHh
Q psy8209         194 NATDITSGLVNIMCGYGAQQSSGVLRYGQLPQVAEASKKVWTSGCIEVMRLWAERN  249 (269)
Q Consensus       194 ~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~~GC~~~l~~~l~~~  249 (269)
                      ..         ..|                      ...+|.+||.+++.+|++++
T Consensus        65 ~~---------~~~----------------------~~~~~~~GC~~~i~~~~~~n   89 (90)
T 1g8q_A           65 SG---------SNI----------------------ISNLFKEDCHQKIDDLFSGK   89 (90)
T ss_dssp             TT---------CCH----------------------HHHHTSCCHHHHHHHHHHTC
T ss_pred             CC---------CCC----------------------cccCccCCcHHHHHHHHHhC
Confidence            21         001                      13578999999999999865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	269
d1g8qa_	90	CD81 extracellular domain {Human (Homo sapiens) [T	97.34

>d1g8qa_ a.135.1.1 (A:) CD81 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Tetraspanin
superfamily: Tetraspanin
family: Tetraspanin
domain: CD81 extracellular domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=7.1e-05  Score=51.11  Aligned_cols=49  Identities=18%  Similarity=0.428  Sum_probs=38.9

Q ss_pred             hhchhhHHHHHHHHHHHHHHhHhC---CChhHHHHHHHHhhcCccccccCCCCCC
Q psy8209         117 FVFPHHIQATLEESFTEKIIHMYR---DDADLQNLIDFAQQEFQCCGLSSEGYMD  168 (269)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~y~---~~~~~~~~~d~iQ~~l~CCG~~~~~~~D  168 (269)
                      |++++++.+++ .+++++..++|-   +++..+..+..+|..|+|||..  |..+
T Consensus         1 F~nkd~V~~ev-~~FY~~~Y~~y~~~~~~~~~k~tLk~fH~~L~CCG~~--~~~~   52 (90)
T d1g8qa_           1 FVNKDQIAKDV-KQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSS--TLTA   52 (90)
T ss_dssp             CCCHHHHHHHH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCSCT--TCGG
T ss_pred             CCchhHHHHHH-HHHHHHHHHHHhhcCCcchHHHHHHHHHHHHccCCCC--Cccc
Confidence            56788998888 778888888883   2344666899999999999999  8654