Psyllid ID: psy8357

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
Protein Sequence
MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRR
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHEEEEccccHHHHHHHHHHHHHcccccccHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHcccccccHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcHHHHHHc
Secondary Structure Prediction (SSPRO)
cEEEcccccEEccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHccccccccccccHHHHHHHHHHHEEEEcccccHEccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHcc
Coil and Loop (DISEMBL)
mlyvdgmtgimdhpptVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHavdnsngeppwsNIMRLLTDRDSTDTELLIYAMSLLNKtlngipdqdsyyDQVDALEEQGIAAVIRSLDQhgikyttsstdlpteplvALGQVMLYVdgmtgimdhpptVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHavdnsngeppwsNIMRLLTDRDSTDTELLIYAMSLLNKtlngipdqdsyyDQVDALEEQGIAAVIRR
Flexible Loop (DISEMBL)
MLYVDGMTgimdhpptVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTtsstdlpteplVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRR
Low Complexity Region (SEG)
MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRR
Disordered region (IsUnstruct)
**YVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGI******
Disordered Region (DISOPRED)
MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVI**
Disordered Region (DISEMBL)
MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRR
Disordered Region (DISPRO)
MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAA****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	276	2.2.26 [Sep-21-2011]
Q76LL6	1578	FH1/FH2 domain-containing	yes	N/A	0.474	0.083	0.689	2e-49
Q2V2M9	1422	FH1/FH2 domain-containing	yes	N/A	0.474	0.092	0.674	2e-47
Q9Y613	1164	FH1/FH2 domain-containing	no	N/A	0.478	0.113	0.560	1e-40
Q6P9Q4	1197	FH1/FH2 domain-containing	no	N/A	0.478	0.110	0.575	1e-40
Q1ZXK2	1074	Formin-G OS=Dictyostelium	yes	N/A	0.438	0.112	0.304	6e-05

>sp|Q76LL6|FHOD3_MOUSE FH1/FH2 domain-containing protein 3 OS=Mus musculus GN=Fhod3 PE=1 SV=1

 Score =  195 bits (496), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 91/132 (68%), Positives = 108/132 (81%)

Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
           L ALGQ+MLYVDGM G+++H  T+QWLY LV SKFRLV+KTALKLLL+FVEY ESN  LL
Sbjct: 169 LRALGQIMLYVDGMNGVINHSETIQWLYTLVGSKFRLVVKTALKLLLVFVEYSESNAPLL 228

Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
           IQAV AVD   G  PWSNIM +L ++D  DTELL+YAM+L+NKTL G+PDQD++YD VD 
Sbjct: 229 IQAVSAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLAGLPDQDTFYDVVDC 288

Query: 265 LEEQGIAAVIRR 276
           LEE GIAAV +R
Sbjct: 289 LEELGIAAVSQR 300

Actin-organizing protein that may cause stress fiber formation together with cell elongation.
Mus musculus (taxid: 10090)

>sp|Q2V2M9|FHOD3_HUMAN FH1/FH2 domain-containing protein 3 OS=Homo sapiens GN=FHOD3 PE=1 SV=2

 Score =  189 bits (480), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 89/132 (67%), Positives = 108/132 (81%)

Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
           L ALGQ+MLYVDGM G+++   T+QWLY L+ SKFRLV+KTALKLLL+FVEY ESN  LL
Sbjct: 169 LRALGQIMLYVDGMNGVINRNETIQWLYTLIGSKFRLVVKTALKLLLVFVEYSESNAPLL 228

Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
           IQAV AVD   G  PWSNIM +L ++D  DTELL+YAM+L+NKTL+G+PDQD++YD VD 
Sbjct: 229 IQAVTAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLSGLPDQDTFYDVVDC 288

Query: 265 LEEQGIAAVIRR 276
           LEE GIAAV +R
Sbjct: 289 LEELGIAAVSQR 300

Actin-organizing protein that may cause stress fiber formation together with cell elongation.

Homo sapiens (taxid: 9606)

>sp|Q9Y613|FHOD1_HUMAN FH1/FH2 domain-containing protein 1 OS=Homo sapiens GN=FHOD1 PE=1 SV=3

 Score =  167 bits (422), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/132 (56%), Positives = 105/132 (79%)

Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
           L ALGQ+ML+VDGM G++ H  T+QWLY L AS  RLV+KTALKLLL+FVEY E+N  L 
Sbjct: 181 LRALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLF 240

Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
           I+AV++V ++ G PPW+N++ +L +++  D ELL+Y ++L+NKTL  +PDQDS+YD  DA
Sbjct: 241 IRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDA 300

Query: 265 LEEQGIAAVIRR 276
           LE+QG+ A+++R
Sbjct: 301 LEQQGMEALVQR 312

Required for the assembly of F-actin structures, such as stress fibers. Depends on the Rho-ROCK cascade for its activity. Contributes to the coordination of microtubules with actin fibers and plays a role in cell elongation. Acts synergistically with ROCK1 to promote SRC-dependent non-apoptotic plasma membrane blebbing.

Homo sapiens (taxid: 9606)

>sp|Q6P9Q4|FHOD1_MOUSE FH1/FH2 domain-containing protein 1 OS=Mus musculus GN=Fhod1 PE=2 SV=3

 Score =  167 bits (422), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 76/132 (57%), Positives = 104/132 (78%)

Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
           L ALGQ+ML+VDGM G++ H  TVQWLY L AS  RLV+KTALKLLL+FVEY E+N  L 
Sbjct: 181 LRALGQLMLFVDGMLGVVAHSETVQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLF 240

Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
           IQAV+AV ++ G  PW+N++ +L +++  D ELL+Y ++L+NKTL  +PDQDS+YD  DA
Sbjct: 241 IQAVNAVASATGTLPWANLVSILEEKNGADAELLVYTVTLINKTLAALPDQDSFYDVTDA 300

Query: 265 LEEQGIAAVIRR 276
           LE+QG+ A+++R
Sbjct: 301 LEQQGMEALVQR 312

Required for the assembly of F-actin structures, such as stress fibers. Depends on the Rho-ROCK cascade for its activity. Contributes to the coordination of microtubules with actin fibers and plays a role in cell elongation. Acts synergistically with ROCK1 to promote SRC-dependent non-apoptotic plasma membrane blebbing.

Mus musculus (taxid: 10090)

>sp|Q1ZXK2|FORG_DICDI Formin-G OS=Dictyostelium discoideum GN=forG PE=1 SV=1

 Score = 48.5 bits (114), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 3   YVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQ-AVHAVD 61
           YV  M  I   P  V+ L+ LV S    V + AL+LL +  ++ +   F  +  A     
Sbjct: 187 YVSAMEIITKTPHLVKQLFSLVDSNVVGVCRGALELLFVLCDFRKEEGFKSVHLAAKGTA 246

Query: 62  NSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAA 121
            + G+ P+ N+++LL   DS D E  I A +LLN  L+  P  +          E G+  
Sbjct: 247 VAQGKKPYLNVIKLL---DSGDLETKINAFTLLNVLLSNCPTDEKVGKLCKKWGELGLDD 303

Query: 122 VIRSL 126
            +RSL
Sbjct: 304 KLRSL 308

Formins play an important role in the nucleation of actin and the formation of linear actin filaments.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
380029537	2715	PREDICTED: uncharacterized protein LOC10	0.474	0.048	0.704	7e-51
350414953	2696	PREDICTED: hypothetical protein LOC10074	0.474	0.048	0.704	7e-51
340714873	2697	PREDICTED: hypothetical protein LOC10064	0.474	0.048	0.704	7e-51
328780025	2747	PREDICTED: hypothetical protein LOC40978	0.474	0.047	0.704	7e-51
328703442	1928	PREDICTED: hypothetical protein LOC10015	0.478	0.068	0.704	5e-50
328703440	1885	PREDICTED: hypothetical protein LOC10015	0.478	0.070	0.704	5e-50
328703438	1927	PREDICTED: hypothetical protein LOC10015	0.478	0.068	0.704	5e-50
383865148	1140	PREDICTED: FH1/FH2 domain-containing pro	0.474	0.114	0.704	8e-50
251829648	1161	jazigo [Apis mellifera]	0.474	0.112	0.704	8e-50
332021730	1116	FH1/FH2 domain-containing protein 3 [Acr	0.474	0.117	0.696	5e-49

>gi|380029537|ref|XP_003698426.1| PREDICTED: uncharacterized protein LOC100869084 [Apis florea]

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 93/132 (70%), Positives = 112/132 (84%)

Query: 145  LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
            L ALGQVMLYVDGM G+M+H  TVQWLY L+AS+FRLV+KTALKLLL+FVEYVE+N  LL
Sbjct: 1637 LRALGQVMLYVDGMNGVMEHGQTVQWLYTLIASRFRLVVKTALKLLLVFVEYVETNSLLL 1696

Query: 205  IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
            ++AV +VD S G  PW+N+M+LL D D+ DTELLIYA +L+NK LNGIPDQD+YYDQVD 
Sbjct: 1697 VRAVRSVDTSRGMIPWTNVMKLLKDYDAADTELLIYATTLVNKCLNGIPDQDTYYDQVDC 1756

Query: 265  LEEQGIAAVIRR 276
            LEEQGI  +I+R
Sbjct: 1757 LEEQGIEGIIQR 1768

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350414953|ref|XP_003490485.1| PREDICTED: hypothetical protein LOC100740589 [Bombus impatiens]

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 93/132 (70%), Positives = 112/132 (84%)

Query: 145  LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
            L ALGQVMLYVDGM G+M+H  TVQWLY L+AS+FRLV+KTALKLLL+FVEYVE+N  LL
Sbjct: 1620 LRALGQVMLYVDGMNGVMEHGQTVQWLYTLIASRFRLVVKTALKLLLVFVEYVETNSLLL 1679

Query: 205  IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
            ++AV +VD S G  PW+N+M+LL D D+ DTELLIYA +L+NK LNGIPDQD+YYDQVD 
Sbjct: 1680 VRAVRSVDTSRGMIPWTNVMKLLKDYDAADTELLIYATTLVNKCLNGIPDQDTYYDQVDC 1739

Query: 265  LEEQGIAAVIRR 276
            LEEQGI  +I+R
Sbjct: 1740 LEEQGIEGIIQR 1751

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714873|ref|XP_003395947.1| PREDICTED: hypothetical protein LOC100648204 [Bombus terrestris]

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 93/132 (70%), Positives = 112/132 (84%)

Query: 145  LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
            L ALGQVMLYVDGM G+M+H  TVQWLY L+AS+FRLV+KTALKLLL+FVEYVE+N  LL
Sbjct: 1623 LRALGQVMLYVDGMNGVMEHGQTVQWLYTLIASRFRLVVKTALKLLLVFVEYVETNSLLL 1682

Query: 205  IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
            ++AV +VD S G  PW+N+M+LL D D+ DTELLIYA +L+NK LNGIPDQD+YYDQVD 
Sbjct: 1683 VRAVRSVDTSRGMIPWTNVMKLLKDYDAADTELLIYATTLVNKCLNGIPDQDTYYDQVDC 1742

Query: 265  LEEQGIAAVIRR 276
            LEEQGI  +I+R
Sbjct: 1743 LEEQGIEGIIQR 1754

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328780025|ref|XP_393280.4| PREDICTED: hypothetical protein LOC409786 isoform 1 [Apis mellifera]

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 93/132 (70%), Positives = 112/132 (84%)

Query: 145  LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
            L ALGQVMLYVDGM G+M+H  TVQWLY L+AS+FRLV+KTALKLLL+FVEYVE+N  LL
Sbjct: 1670 LRALGQVMLYVDGMNGVMEHGQTVQWLYTLIASRFRLVVKTALKLLLVFVEYVETNSLLL 1729

Query: 205  IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
            ++AV +VD S G  PW+N+M+LL D D+ DTELLIYA +L+NK LNGIPDQD+YYDQVD 
Sbjct: 1730 VRAVRSVDTSRGMIPWTNVMKLLKDYDAADTELLIYATTLVNKCLNGIPDQDTYYDQVDC 1789

Query: 265  LEEQGIAAVIRR 276
            LEEQGI  +I+R
Sbjct: 1790 LEEQGIEGIIQR 1801

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328703442|ref|XP_003242205.1| PREDICTED: hypothetical protein LOC100159326 isoform 3 [Acyrthosiphon pisum]

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 93/132 (70%), Positives = 114/132 (86%)

Query: 145  LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
            L ALGQVMLYVDGM G+++  PT+QWLY L+ S+FRLV+KTALKLLL+F+EYVESNC + 
Sbjct: 997  LRALGQVMLYVDGMNGVIEDNPTIQWLYSLLTSRFRLVVKTALKLLLVFIEYVESNCLIF 1056

Query: 205  IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
            IQAV AV  SNG P WSN+M+LLT+ D  DTELL+YAM+L+NKTLNGIPDQD+YYDQVD+
Sbjct: 1057 IQAVLAVHQSNGTPLWSNVMKLLTEPDMVDTELLVYAMTLINKTLNGIPDQDTYYDQVDS 1116

Query: 265  LEEQGIAAVIRR 276
            +EEQGI  VI++
Sbjct: 1117 IEEQGIEQVIQK 1128

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328703440|ref|XP_003242204.1| PREDICTED: hypothetical protein LOC100159326 isoform 2 [Acyrthosiphon pisum]

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 93/132 (70%), Positives = 114/132 (86%)

Query: 145  LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
            L ALGQVMLYVDGM G+++  PT+QWLY L+ S+FRLV+KTALKLLL+F+EYVESNC + 
Sbjct: 997  LRALGQVMLYVDGMNGVIEDNPTIQWLYSLLTSRFRLVVKTALKLLLVFIEYVESNCLIF 1056

Query: 205  IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
            IQAV AV  SNG P WSN+M+LLT+ D  DTELL+YAM+L+NKTLNGIPDQD+YYDQVD+
Sbjct: 1057 IQAVLAVHQSNGTPLWSNVMKLLTEPDMVDTELLVYAMTLINKTLNGIPDQDTYYDQVDS 1116

Query: 265  LEEQGIAAVIRR 276
            +EEQGI  VI++
Sbjct: 1117 IEEQGIEQVIQK 1128

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328703438|ref|XP_001949851.2| PREDICTED: hypothetical protein LOC100159326 isoform 1 [Acyrthosiphon pisum]

 Score =  203 bits (517), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 93/132 (70%), Positives = 114/132 (86%)

Query: 145  LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
            L ALGQVMLYVDGM G+++  PT+QWLY L+ S+FRLV+KTALKLLL+F+EYVESNC + 
Sbjct: 997  LRALGQVMLYVDGMNGVIEDNPTIQWLYSLLTSRFRLVVKTALKLLLVFIEYVESNCLIF 1056

Query: 205  IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
            IQAV AV  SNG P WSN+M+LLT+ D  DTELL+YAM+L+NKTLNGIPDQD+YYDQVD+
Sbjct: 1057 IQAVLAVHQSNGTPLWSNVMKLLTEPDMVDTELLVYAMTLINKTLNGIPDQDTYYDQVDS 1116

Query: 265  LEEQGIAAVIRR 276
            +EEQGI  VI++
Sbjct: 1117 IEEQGIEQVIQK 1128

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865148|ref|XP_003708037.1| PREDICTED: FH1/FH2 domain-containing protein 3-like [Megachile rotundata]

 Score =  203 bits (516), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 93/132 (70%), Positives = 112/132 (84%)

Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
           L ALGQVMLYVDGM G+M+H  TVQWLY L+AS+FRLV+KTALKLLL+FVEYVE+N  LL
Sbjct: 66  LRALGQVMLYVDGMNGVMEHGQTVQWLYTLIASRFRLVVKTALKLLLVFVEYVETNSLLL 125

Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
           ++AV +VD S G  PW+N+M+LL D D+ DTELLIYA +L+NK LNGIPDQD+YYDQVD 
Sbjct: 126 VRAVRSVDTSRGMIPWTNVMKLLKDYDAADTELLIYATTLVNKCLNGIPDQDTYYDQVDC 185

Query: 265 LEEQGIAAVIRR 276
           LEEQGI  +I+R
Sbjct: 186 LEEQGIEGIIQR 197

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|251829648|gb|ACT21202.1| jazigo [Apis mellifera]

 Score =  203 bits (516), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 93/132 (70%), Positives = 112/132 (84%)

Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
           L ALGQVMLYVDGM G+M+H  TVQWLY L+AS+FRLV+KTALKLLL+FVEYVE+N  LL
Sbjct: 83  LRALGQVMLYVDGMNGVMEHGQTVQWLYTLIASRFRLVVKTALKLLLVFVEYVETNSLLL 142

Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
           ++AV +VD S G  PW+N+M+LL D D+ DTELLIYA +L+NK LNGIPDQD+YYDQVD 
Sbjct: 143 VRAVRSVDTSRGMIPWTNVMKLLKDYDAADTELLIYATTLVNKCLNGIPDQDTYYDQVDC 202

Query: 265 LEEQGIAAVIRR 276
           LEEQGI  +I+R
Sbjct: 203 LEEQGIEGIIQR 214

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021730|gb|EGI62086.1| FH1/FH2 domain-containing protein 3 [Acromyrmex echinatior]

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 92/132 (69%), Positives = 111/132 (84%)

Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
           L ALGQVMLYVDGM G+M+H  TV+WLY L+AS+FRLV+KTALKLLL+FVEYVE+N  LL
Sbjct: 34  LRALGQVMLYVDGMNGVMEHGQTVEWLYTLIASRFRLVVKTALKLLLVFVEYVETNSLLL 93

Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
           ++AV AVD + G  PW N+M+LL D D+ DTELLIYA +L+NK LNGIPDQD+YYDQVD 
Sbjct: 94  VRAVRAVDQARGVVPWINVMKLLKDYDAADTELLIYATTLINKCLNGIPDQDTYYDQVDC 153

Query: 265 LEEQGIAAVIRR 276
           LEEQG+  VI+R
Sbjct: 154 LEEQGMEGVIQR 165

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
MGI|MGI:1925847	1578	Fhod3 "formin homology 2 domai	0.605	0.105	0.576	7.5e-44
UNIPROTKB|F1LP58	1258	LOC100360334 "Protein LOC10036	0.471	0.103	0.692	8e-44
UNIPROTKB|E1BP46	1437	FHOD3 "Uncharacterized protein	0.478	0.091	0.674	8.1e-44
UNIPROTKB|F1LRX2	1377	LOC100360334 "Protein LOC10036	0.471	0.094	0.692	9.6e-44
UNIPROTKB|F1LQJ2	1409	LOC100360334 "Protein LOC10036	0.471	0.092	0.692	1e-43
FB|FBgn0261259	2511	Fhos [Drosophila melanogaster	0.478	0.052	0.674	1.2e-43
UNIPROTKB|K7EIY5	1303	FHOD3 "FH1/FH2 domain-containi	0.478	0.101	0.674	4.8e-43
UNIPROTKB|Q2V2M9	1422	FHOD3 "FH1/FH2 domain-containi	0.478	0.092	0.674	5.7e-43
ZFIN|ZDB-GENE-081028-61	1549	si:ch211-209d1.1 "si:ch211-209	0.478	0.085	0.666	8.4e-43
ZFIN|ZDB-GENE-060503-633	1407	si:dkey-263h23.7 "si:dkey-263h	0.478	0.093	0.621	2e-40

MGI|MGI:1925847 Fhod3 "formin homology 2 domain containing 3" [Mus musculus (taxid:10090)]

 Score = 476 (172.6 bits), Expect = 7.5e-44, P = 7.5e-44
 Identities = 98/170 (57%), Positives = 122/170 (71%)

Query:   107 YYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPP 166
             + D  D + E  IA  +  L + G +   +  +     L ALGQ+MLYVDGM G+++H  
Sbjct:   134 FQDDKDLVHEFVIAEGLTCLIKVGAE---ADQNYQNYILRALGQIMLYVDGMNGVINHSE 190

Query:   167 TVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRL 226
             T+QWLY LV SKFRLV+KTALKLLL+FVEY ESN  LLIQAV AVD   G  PWSNIM +
Sbjct:   191 TIQWLYTLVGSKFRLVVKTALKLLLVFVEYSESNAPLLIQAVSAVDTKRGVKPWSNIMEI 250

Query:   227 LTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRR 276
             L ++D  DTELL+YAM+L+NKTL G+PDQD++YD VD LEE GIAAV +R
Sbjct:   251 LEEKDGVDTELLVYAMTLVNKTLAGLPDQDTFYDVVDCLEELGIAAVSQR 300

GO:0003674 "molecular_function" evidence=ND

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005865 "striated muscle thin filament" evidence=ISO

GO:0016043 "cellular component organization" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030837 "negative regulation of actin filament polymerization" evidence=IDA

GO:0045214 "sarcomere organization" evidence=IGI;ISO

UNIPROTKB|F1LP58 LOC100360334 "Protein LOC100360334" [Rattus norvegicus (taxid:10116)]

 Score = 474 (171.9 bits), Expect = 8.0e-44, P = 8.0e-44
 Identities = 90/130 (69%), Positives = 107/130 (82%)

Query:   147 ALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQ 206
             ALGQ+MLYVDGM G+++H  T+QWLY LV SKFRLV+KTALKLLL+FVEY ESN  LLIQ
Sbjct:     1 ALGQIMLYVDGMNGVINHSETIQWLYTLVGSKFRLVVKTALKLLLVFVEYSESNAPLLIQ 60

Query:   207 AVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALE 266
             AV AVD   G  PWSNIM +L ++D  DTELL+YAM+L+NKTL G+PDQD++YD VD LE
Sbjct:    61 AVSAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLAGLPDQDTFYDVVDCLE 120

Query:   267 EQGIAAVIRR 276
             E GIAAV +R
Sbjct:   121 ELGIAAVSQR 130

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|E1BP46 FHOD3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 475 (172.3 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 89/132 (67%), Positives = 109/132 (82%)

Query:   145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
             L ALGQ+MLYVDGM G+++H  T+QWLY L+ SKFRLV+KTALKLLL+FVEY ESN  LL
Sbjct:   169 LRALGQIMLYVDGMNGVINHNETIQWLYTLIGSKFRLVVKTALKLLLVFVEYSESNAPLL 228

Query:   205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
             IQA+ AVD   G  PWSNIM +L ++D  DTELL+YAM+L+NKTL+G+PDQD++YD VD 
Sbjct:   229 IQAISAVDTKRGVTPWSNIMEILEEKDGVDTELLVYAMTLVNKTLSGLPDQDTFYDVVDC 288

Query:   265 LEEQGIAAVIRR 276
             LEE GIAAV +R
Sbjct:   289 LEELGIAAVSQR 300

GO:0045214 "sarcomere organization" evidence=IEA

GO:0030837 "negative regulation of actin filament polymerization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|F1LRX2 LOC100360334 "Protein LOC100360334" [Rattus norvegicus (taxid:10116)]

 Score = 474 (171.9 bits), Expect = 9.6e-44, P = 9.6e-44
 Identities = 90/130 (69%), Positives = 107/130 (82%)

Query:   147 ALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQ 206
             ALGQ+MLYVDGM G+++H  T+QWLY LV SKFRLV+KTALKLLL+FVEY ESN  LLIQ
Sbjct:     1 ALGQIMLYVDGMNGVINHSETIQWLYTLVGSKFRLVVKTALKLLLVFVEYSESNAPLLIQ 60

Query:   207 AVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALE 266
             AV AVD   G  PWSNIM +L ++D  DTELL+YAM+L+NKTL G+PDQD++YD VD LE
Sbjct:    61 AVSAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLAGLPDQDTFYDVVDCLE 120

Query:   267 EQGIAAVIRR 276
             E GIAAV +R
Sbjct:   121 ELGIAAVSQR 130

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|F1LQJ2 LOC100360334 "Protein LOC100360334" [Rattus norvegicus (taxid:10116)]

 Score = 474 (171.9 bits), Expect = 1.0e-43, P = 1.0e-43
 Identities = 90/130 (69%), Positives = 107/130 (82%)

Query:   147 ALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQ 206
             ALGQ+MLYVDGM G+++H  T+QWLY LV SKFRLV+KTALKLLL+FVEY ESN  LLIQ
Sbjct:     1 ALGQIMLYVDGMNGVINHSETIQWLYTLVGSKFRLVVKTALKLLLVFVEYSESNAPLLIQ 60

Query:   207 AVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALE 266
             AV AVD   G  PWSNIM +L ++D  DTELL+YAM+L+NKTL G+PDQD++YD VD LE
Sbjct:    61 AVSAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLAGLPDQDTFYDVVDCLE 120

Query:   267 EQGIAAVIRR 276
             E GIAAV +R
Sbjct:   121 ELGIAAVSQR 130

GO:0003779 "actin binding" evidence=IEA

GO:0005865 "striated muscle thin filament" evidence=IDA

GO:0045214 "sarcomere organization" evidence=IMP

FB|FBgn0261259 Fhos [Drosophila melanogaster (taxid:7227)]

 Score = 477 (173.0 bits), Expect = 1.2e-43, P = 1.2e-43
 Identities = 89/132 (67%), Positives = 108/132 (81%)

Query:   145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
             L ALGQVMLYVDGM G+M H PT+QWLY L+AS +R V+KTALKLLL+FVEY ESNC++L
Sbjct:  1294 LRALGQVMLYVDGMNGVMKHEPTMQWLYSLIASNYRSVVKTALKLLLVFVEYAESNCYVL 1353

Query:   205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
             + A+HAVD S G  PWSNIMRLL D D+ D EL+IYA SL+NKTL G+ DQDS+YD+ D 
Sbjct:  1354 VSAIHAVDASQGTLPWSNIMRLLKDYDNADAELVIYATSLINKTLAGLNDQDSFYDESDL 1413

Query:   265 LEEQGIAAVIRR 276
             LE+QG+  VI+R
Sbjct:  1414 LEQQGMETVIQR 1425

GO:0003779 "actin binding" evidence=IEA;ISS

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003012 "muscle system process" evidence=IEP;IGI

GO:0046716 "muscle cell homeostasis" evidence=IGI;IMP

UNIPROTKB|K7EIY5 FHOD3 "FH1/FH2 domain-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 467 (169.5 bits), Expect = 4.8e-43, P = 4.8e-43
 Identities = 89/132 (67%), Positives = 108/132 (81%)

Query:   145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
             L ALGQ+MLYVDGM G+++   T+QWLY L+ SKFRLV+KTALKLLL+FVEY ESN  LL
Sbjct:    33 LRALGQIMLYVDGMNGVINRNETIQWLYTLIGSKFRLVVKTALKLLLVFVEYSESNAPLL 92

Query:   205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
             IQAV AVD   G  PWSNIM +L ++D  DTELL+YAM+L+NKTL+G+PDQD++YD VD 
Sbjct:    93 IQAVTAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLSGLPDQDTFYDVVDC 152

Query:   265 LEEQGIAAVIRR 276
             LEE GIAAV +R
Sbjct:   153 LEELGIAAVSQR 164

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|Q2V2M9 FHOD3 "FH1/FH2 domain-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 467 (169.5 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 89/132 (67%), Positives = 108/132 (81%)

Query:   145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
             L ALGQ+MLYVDGM G+++   T+QWLY L+ SKFRLV+KTALKLLL+FVEY ESN  LL
Sbjct:   169 LRALGQIMLYVDGMNGVINRNETIQWLYTLIGSKFRLVVKTALKLLLVFVEYSESNAPLL 228

Query:   205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
             IQAV AVD   G  PWSNIM +L ++D  DTELL+YAM+L+NKTL+G+PDQD++YD VD 
Sbjct:   229 IQAVTAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLSGLPDQDTFYDVVDC 288

Query:   265 LEEQGIAAVIRR 276
             LEE GIAAV +R
Sbjct:   289 LEELGIAAVSQR 300

GO:0003779 "actin binding" evidence=IEA

GO:0030837 "negative regulation of actin filament polymerization" evidence=IEA

GO:0045214 "sarcomere organization" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0030018 "Z disc" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

ZFIN|ZDB-GENE-081028-61 si:ch211-209d1.1 "si:ch211-209d1.1" [Danio rerio (taxid:7955)]

 Score = 466 (169.1 bits), Expect = 8.4e-43, P = 8.4e-43
 Identities = 88/132 (66%), Positives = 107/132 (81%)

Query:   145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
             L ALGQ+MLYVDGM G++ H  TVQWLY LV SKFRLV+KTA+KLLL+FVEY ESN  LL
Sbjct:   169 LRALGQIMLYVDGMNGLIGHNETVQWLYTLVGSKFRLVVKTAMKLLLVFVEYTESNAPLL 228

Query:   205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
             IQAV++VD   G  PWSN M +L ++D  DTELL+YAM+L+NKTL G+PDQDS+YD VD+
Sbjct:   229 IQAVNSVDTKQGSKPWSNAMEILDEKDGMDTELLVYAMTLINKTLAGLPDQDSFYDVVDS 288

Query:   265 LEEQGIAAVIRR 276
             LEEQ + AV +R
Sbjct:   289 LEEQNMEAVAQR 300

GO:0003779 "actin binding" evidence=IEA

GO:0016043 "cellular component organization" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

ZFIN|ZDB-GENE-060503-633 si:dkey-263h23.7 "si:dkey-263h23.7" [Danio rerio (taxid:7955)]

 Score = 443 (161.0 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 82/132 (62%), Positives = 103/132 (78%)

Query:   145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
             L ALGQ+MLYVDGM G++ H  ++QWLY L+ SKFRLV+KT+LKLLL+FVEY ESN  LL
Sbjct:   171 LRALGQIMLYVDGMNGVIGHNESIQWLYQLIGSKFRLVVKTSLKLLLVFVEYSESNAALL 230

Query:   205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
             IQA+  VDN  G   WSN M +L ++D  DTELL+Y M+L+NKTL  +PDQDS+YD VD 
Sbjct:   231 IQAIDTVDNKRGCKSWSNAMEILAEKDGVDTELLVYVMTLINKTLAALPDQDSFYDMVDV 290

Query:   265 LEEQGIAAVIRR 276
             LEEQG+ +V +R
Sbjct:   291 LEEQGMESVSQR 302

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0016043 "cellular component organization" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2V2M9	FHOD3_HUMAN	No assigned EC number	0.6742	0.4746	0.0921	yes	N/A
Q76LL6	FHOD3_MOUSE	No assigned EC number	0.6893	0.4746	0.0830	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	276
PF06367	197	Drf_FH3: Diaphanous FH3 Domain; InterPro: IPR01047	97.68
KOG1925|consensus	817		97.54
PF06367	197	Drf_FH3: Diaphanous FH3 Domain; InterPro: IPR01047	97.16
PF11841	160	DUF3361: Domain of unknown function (DUF3361)	97.06
PF06371	187	Drf_GBD: Diaphanous GTPase-binding Domain; InterPr	96.04
KOG1924|consensus	1102		90.8
PF10508	503	Proteasom_PSMB: Proteasome non-ATPase 26S subunit;	85.52
PF10508	503	Proteasom_PSMB: Proteasome non-ATPase 26S subunit;	81.1

>PF06367 Drf_FH3: Diaphanous FH3 Domain; InterPro: IPR010472 Formin homology (FH) proteins play a crucial role in the reorganisation of the actin cytoskeleton, which mediates various functions of the cell cortex including motility, adhesion, and cytokinesis []

Probab=97.68  E-value=0.00012  Score=63.13  Aligned_cols=76  Identities=16%  Similarity=0.266  Sum_probs=64.3

Q ss_pred             chHHHHHHHHHhhhcCC-CCCchHHHHhhccCCCCchHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhhHHHHHh
Q psy8357         200 NCFLLIQAVHAVDNSNG-EPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIR  275 (276)
Q Consensus       200 n~~l~~~Av~~v~~~~~-~~pwsnlm~lL~~~d~~D~E~~v~amTLiNktL~~~pdqds~yd~~d~le~~Gme~i~~  275 (276)
                      .+..+++|+..+...++ ..+|.+++..+.+.++.+.|..+.+|++||..+++.||.+....+-..|+.+|+.++++
T Consensus         2 G~~~vl~a~~~~~~~~~e~~RF~~lv~~l~~~~~~~~e~~~~~l~~IN~li~~~~d~~~R~~lr~e~~~~GL~~il~   78 (197)
T PF06367_consen    2 GHEKVLEAFDNFKEVKGERGRFQSLVGALESVDSSDIEYKTACLQFINSLINSPEDLNFRVHLRNEFERLGLLDILE   78 (197)
T ss_dssp             HHHHHHHHHHHHHHHHT-S-TTHHHHHHCS--TTS-HHHHHHHHHHHHHHHTT-SSHHHHHHHHHHHHHTTHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCcccHHHHHHHHHccccCcHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCcHHHHH
Confidence            35678899998875555 88999999999866789999999999999999999999999999999999999999886

Formins are multidomain proteins that interact with diverse signalling molecules and cytoskeletal proteins, although some formins have been assigned functions within the nucleus. Formins are characterised by the presence of three FH domains (FH1, FH2 and FH3), although members of the formin family do not necessarily contain all three domains []. The proline-rich FH1 domain mediates interactions with a variety of proteins, including the actin-binding protein profilin, SH3 (Src homology 3) domain proteins, and WW domain proteins. The FH2 domain (IPR003104 from INTERPRO) is required to inhibit actin polymerisation. The FH3 domain is less well conserved and is required for directing formins to the correct intracellular location, such the mitotic spindle [], or the projection tip during conjugation []. In addition, some formins can contain a GTPase-binding domain (GBD) (IPR010473 from INTERPRO) required for binding to Rho small GTPases, and a C-terminal conserved Dia-autoregulatory domain (DAD). This entry represents the FH3 domain.; GO: 0003779 actin binding, 0016043 cellular component organization; PDB: 3OBV_A 2BNX_A 3EG5_D 2BAP_B 3O4X_B 1Z2C_B 2F31_A.

>KOG1925|consensus

Probab=97.54  E-value=4.3e-05  Score=77.68  Aligned_cols=54  Identities=44%  Similarity=0.747  Sum_probs=43.7

Q ss_pred             HHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccch
Q psy8357          95 NKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMT  159 (276)
Q Consensus        95 NktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~  159 (276)
                      ||++.++||||+|||+.||||+||||.+.+++      ....+++..   ++  .|...|...+.
T Consensus         1 ~K~~~~~~~~~~~~~v~~~L~~~~~~~L~~~H------~~~~~~~~~---~~--~Q~~~~~N~L~   54 (817)
T KOG1925|consen    1 NKTLAALPDQDSFYDVTDALEQQGMDTLVQRH------LGTAGTDVD---LR--TQLVLYENALK   54 (817)
T ss_pred             CCccccCCCccchhHHHHHHHHhhhhHHHHhc------cCCCccccc---cc--chhhhhhhhhh
Confidence            79999999999999999999999999999997      555666654   23  66666665543

>PF06367 Drf_FH3: Diaphanous FH3 Domain; InterPro: IPR010472 Formin homology (FH) proteins play a crucial role in the reorganisation of the actin cytoskeleton, which mediates various functions of the cell cortex including motility, adhesion, and cytokinesis []

Probab=97.16  E-value=0.0016  Score=56.13  Aligned_cols=97  Identities=16%  Similarity=0.256  Sum_probs=75.0

Q ss_pred             hHHHHHHHHHhhccCC-CCCchHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhh
Q psy8357          50 CFLLIQAVHAVDNSNG-EPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQ  128 (276)
Q Consensus        50 ~~lli~Av~~v~~~~g-~~pws~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~  128 (276)
                      +..+++|+.......| ..+|.++|..+.+.++.+.|..+.+|++||-.+++.||.+.-..+...++..|+.+++.++.+
T Consensus         3 ~~~vl~a~~~~~~~~~e~~RF~~lv~~l~~~~~~~~e~~~~~l~~IN~li~~~~d~~~R~~lr~e~~~~GL~~il~~l~~   82 (197)
T PF06367_consen    3 HEKVLEAFDNFKEVKGERGRFQSLVGALESVDSSDIEYKTACLQFINSLINSPEDLNFRVHLRNEFERLGLLDILEKLRN   82 (197)
T ss_dssp             HHHHHHHHHHHHHHHT-S-TTHHHHHHCS--TTS-HHHHHHHHHHHHHHHTT-SSHHHHHHHHHHHHHTTHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCCcccHHHHHHHHHccccCcHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCcHHHHHHHHh
Confidence            5678888888865555 889999999997657899999999999999999999998777789999999999999999732


Q ss_pred             cCCccccCCCCCCchhhhhhcchhhecccch
Q psy8357         129 HGIKYTTSSTDLPTEPLVALGQVMLYVDGMT  159 (276)
Q Consensus       129 ~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~  159 (276)
                      .        .+.   .|.  .|+=.|.+.++
T Consensus        83 ~--------~~~---~L~--~Qi~~f~~~~~  100 (197)
T PF06367_consen   83 L--------EDD---DLQ--EQIDIFEENEE  100 (197)
T ss_dssp             S----------H---HHH--HHHHHHHHHHH
T ss_pred             c--------chH---HHH--HHHHHHHHHHH
Confidence            2        122   233  78888887765

Formins are multidomain proteins that interact with diverse signalling molecules and cytoskeletal proteins, although some formins have been assigned functions within the nucleus. Formins are characterised by the presence of three FH domains (FH1, FH2 and FH3), although members of the formin family do not necessarily contain all three domains []. The proline-rich FH1 domain mediates interactions with a variety of proteins, including the actin-binding protein profilin, SH3 (Src homology 3) domain proteins, and WW domain proteins. The FH2 domain (IPR003104 from INTERPRO) is required to inhibit actin polymerisation. The FH3 domain is less well conserved and is required for directing formins to the correct intracellular location, such the mitotic spindle [], or the projection tip during conjugation []. In addition, some formins can contain a GTPase-binding domain (GBD) (IPR010473 from INTERPRO) required for binding to Rho small GTPases, and a C-terminal conserved Dia-autoregulatory domain (DAD). This entry represents the FH3 domain.; GO: 0003779 actin binding, 0016043 cellular component organization; PDB: 3OBV_A 2BNX_A 3EG5_D 2BAP_B 3O4X_B 1Z2C_B 2F31_A.

>PF11841 DUF3361: Domain of unknown function (DUF3361)

Probab=97.06  E-value=0.0029  Score=55.61  Aligned_cols=143  Identities=20%  Similarity=0.268  Sum_probs=98.8

Q ss_pred             HHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhh----ccChhHHHHHHHhhcCC--chhHHHH
Q psy8357         112 DALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGI----MDHPPTVQWLYVLVASK--FRLVIKT  185 (276)
Q Consensus       112 d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gv----i~h~~tvqwLYsL~~S~--~rlVvKt  185 (276)
                      +.+...|+..+++... .|.......++.-.|.|+|.-.+|-+     |+    .=.+..|+..=+.+.++  ...+++.
T Consensus         6 EFI~~~Gl~~L~~~iE-~g~~~~~~~~~~La~~L~af~eLMeH-----g~vsWd~l~~~FI~Kia~~Vn~~~~d~~i~q~   79 (160)
T PF11841_consen    6 EFISRDGLTLLIKMIE-EGTEIQPCKGEILAYALTAFVELMEH-----GIVSWDTLSDSFIKKIASYVNSSAMDASILQR   79 (160)
T ss_pred             HHHhccCHHHHHHHHH-cCCccCcchHHHHHHHHHHHHHHHhc-----CcCchhhccHHHHHHHHHHHccccccchHHHH
Confidence            4678899999998842 12111111246667889988888774     33    33566677776666653  3778888


Q ss_pred             HHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHHhcCCCCCchhhHHHHHH
Q psy8357         186 ALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDAL  265 (276)
Q Consensus       186 aLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiNktL~~~pdqds~yd~~d~l  265 (276)
                      ||..|=-+|.=    .+-+..-   |   ....|+.+++..|.   ++|.|++.|||.|||..+-++|| ++-.++.+.|
T Consensus        80 sLaILEs~Vl~----S~~ly~~---V---~~evt~~~Li~hLq---~~~~~iq~naiaLinAL~~kA~~-~~r~~i~~~l  145 (160)
T PF11841_consen   80 SLAILESIVLN----SPKLYQL---V---EQEVTLESLIRHLQ---VSNQEIQTNAIALINALFLKADD-SKRKEIAETL  145 (160)
T ss_pred             HHHHHHHHHhC----CHHHHHH---H---hccCCHHHHHHHHH---cCCHHHHHHHHHHHHHHHhcCCh-HHHHHHHHHH
Confidence            88877555442    2211111   1   23589999999997   58999999999999999999986 5556888888


Q ss_pred             HHhhHHHHH
Q psy8357         266 EEQGIAAVI  274 (276)
Q Consensus       266 e~~Gme~i~  274 (276)
                      .+..+..++
T Consensus       146 ~~k~~R~~I  154 (160)
T PF11841_consen  146 SQKQIRQVI  154 (160)
T ss_pred             HHHHHHHHH
Confidence            888877665

>PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division []

Probab=96.04  E-value=0.0024  Score=53.72  Aligned_cols=83  Identities=24%  Similarity=0.314  Sum_probs=64.3

Q ss_pred             HHHHHhhHHHHHHhhhhcCCcc--ccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhh
Q psy8357         112 DALEEQGIAAVIRSLDQHGIKY--TTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKL  189 (276)
Q Consensus       112 d~Le~~Gme~i~~~~~~~~~~~--~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkL  189 (276)
                      .+++..|++.++.-+.+...+.  +....+.+..+++.++.+|=.-.|+..|++||+.|..|-...+|+.-.+-+.|+++
T Consensus       102 ~Fl~~~G~~~L~~~L~~~~~~~~~~~~~~~~~~~~l~Clkal~n~~~G~~~v~~~~~~v~~i~~~L~s~~~~~r~~~lei  181 (187)
T PF06371_consen  102 EFLELGGLEALLNVLSKLNKKKEKSEEDIDIEHECLRCLKALMNTKYGLEAVLSHPDSVNLIALSLDSPNIKTRKLALEI  181 (187)
T ss_dssp             HH-HHHHHHHHHHHHHHHHTHHCTCTTCHHHHHHHHHHHHHHTSSHHHHHHHHCSSSHHHHHHHT--TTSHHHHHHHHHH
T ss_pred             HhccCCCHHHHHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHccHHHHHHHHcCcHHHHHHHHHHCCCCHHHHHHHHHH
Confidence            4578899999888764332111  11223566778999999999999999999999999999999999988999999999


Q ss_pred             heeeE
Q psy8357         190 LLIFV  194 (276)
Q Consensus       190 LlVfv  194 (276)
                      |-++|
T Consensus       182 L~~lc  186 (187)
T PF06371_consen  182 LAALC  186 (187)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98775

Drf proteins are characterised by a variety of shared domains: an N-terminal GTPase-binding domain (GBD), formin-homology domains FH1, FH2 (IPR003104 from INTERPRO) and FH3 (IPR010472 from INTERPRO), and a C-terminal conserved Dia-autoregulatory domain (DAD) that binds the GBD. This entry represents the GBD, which is a bifunctional autoinhibitory domain that interacts with and is regulated by activated Rho family members. Mammalian Drf3 contains a CRIB-like motif within its GBD for binding to Cdc42, which is required for Cdc42 to activate and guide Drf3 towards the cell cortex where it remodels the actin skeleton [].; GO: 0003779 actin binding, 0017048 Rho GTPase binding, 0030036 actin cytoskeleton organization; PDB: 3OBV_A 2BNX_A 3EG5_D 2BAP_B 3O4X_B 1Z2C_B 2F31_A.

>KOG1924|consensus

Probab=90.80  E-value=0.97  Score=48.96  Aligned_cols=249  Identities=18%  Similarity=0.187  Sum_probs=156.8

Q ss_pred             chhhhHHHHhhcCcchhHHHHHhhHhheeeee---ccch-hHHH-----------------HHHHHHhhccCCCCCchHH
Q psy8357          14 PPTVQWLYVLVASKFRLVIKTALKLLLIFVEY---VESN-CFLL-----------------IQAVHAVDNSNGEPPWSNI   72 (276)
Q Consensus        14 ~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey---~e~n-~~ll-----------------i~Av~~v~~~~g~~pws~l   72 (276)
                      -.|.|-+|+.   -|.+.++..+.+.....|=   +|.- .+++                 ..+++..+.+...++--.+
T Consensus        70 ~pt~q~~q~~---~~~ls~~e~~~~F~~~~~dmni~eekr~pll~K~~~ek~kmis~~l~~k~~~~~s~ne~~~~s~eyV  146 (1102)
T KOG1924|consen   70 YPTAQGLQDI---GFSLSSNEVLELFELMGEDMNINEEKRKPLLDKDLPEKRKMISQYLQMKMMIRKSDNEAKGSSPEYV  146 (1102)
T ss_pred             CcccccHHHH---hhhccHHHHHHHHHHHhhhccccHhhhhhhhhcCchHHHHHHHHHHHHHHHHhhhhhhhccCChHHH
Confidence            3577888876   4566667666666655432   2221 2222                 1123344555555666778


Q ss_pred             HHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhh-HHHHHHhhhhcCCccccC-CCCCCchhhhhhcc
Q psy8357          73 MRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQG-IAAVIRSLDQHGIKYTTS-STDLPTEPLVALGQ  150 (276)
Q Consensus        73 m~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~G-me~i~~~~~~~~~~~~~~-~tn~q~YiLrAl~q  150 (276)
                      .++..+  -+|.-++=+.-| +-..|.+=|=  ||-.- +.-|-.| +.+++.|++++-  ..++ ..+.+.-|+|-+.+
T Consensus       147 ~~l~~g--l~t~~l~~Cles-lRVsL~~npV--Swvn~-Fgvegl~ll~~~Lkrl~dsk--~~~~~~~k~~~eiIrClka  218 (1102)
T KOG1924|consen  147 VELRSG--LSTKKLLECLES-LRVSLTSNPV--SWVNK-FGVEGLGLLLDVLKRLRDSK--VGSKLDIKNLQEIIRCLKA  218 (1102)
T ss_pred             HHHHcc--cccccHHHHHHH-HhhhhcCCcc--HHHHH-hhhhhHHHHHHHHHHHHhhh--hhhhhHHHHHHHHHHHHHH
Confidence            888854  455555555333 4455554441  22110 1111111 345666654321  1222 22333457899999


Q ss_pred             hhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchH-HHHHHHHHhhhcCCCCCchHHHHhhcc
Q psy8357         151 VMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCF-LLIQAVHAVDNSNGEPPWSNIMRLLTD  229 (276)
Q Consensus       151 ~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~-l~~~Av~~v~~~~~~~pwsnlm~lL~~  229 (276)
                      +|=-.=|.+-|++.+.-+-.|-.-++.+-.+..-.++|||--||=-.|.|.. -+..|+...|.+...--|+.|++=|.-
T Consensus       219 ~mNn~~Gl~~vL~~e~~lllla~aldpr~pnmm~dvvkllsalciV~ee~~~ekvl~aiT~~ae~~~veRF~piv~gl~~  298 (1102)
T KOG1924|consen  219 FMNNKFGLVLVLRRERSLLLLARALDPREPNMMTDVVKLLSALCIVGEENGLEKVLEAITTIAEAKPVERFRPIVEGLDF  298 (1102)
T ss_pred             HhccccceeeeecCCccHHHHHHhcCccCccHHHHHHHHHHHHheeehhhHHHHHHHHHHHHHhhcchhhhhhHHHHHhc
Confidence            9999999999999999888777777877666666677777655544455555 788999999999988999999999962


Q ss_pred             CCCCchHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhhHHHHHh
Q psy8357         230 RDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIR  275 (276)
Q Consensus       230 ~d~~D~E~~v~amTLiNktL~~~pdqds~yd~~d~le~~Gme~i~~  275 (276)
                        +-+.-++|-+|.+||-.-....|-|-.--+-..+-..|++++++
T Consensus       299 --~e~~~l~vacmq~INal~t~p~dldfRlhlR~E~mr~gL~~~l~  342 (1102)
T KOG1924|consen  299 --LEKQQLQVACMQFINALVTSPSDLDFRLHLRSEFMRDGLHKYLP  342 (1102)
T ss_pred             --cchHHHHHHHHHHHHHhcCCHHHhhHHHHHHHHHHHHhHHHHHH
Confidence              33889999999999987766666555555555555666666553

>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells

Probab=85.52  E-value=13  Score=37.45  Aligned_cols=225  Identities=19%  Similarity=0.176  Sum_probs=131.7

Q ss_pred             cccCchhhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHH----HHHHHHHhhcc-C---CCCCchHHHHhhccCCC
Q psy8357          10 IMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFL----LIQAVHAVDNS-N---GEPPWSNIMRLLTDRDS   81 (276)
Q Consensus        10 vi~h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~l----li~Av~~v~~~-~---g~~pws~lm~lL~~~ds   81 (276)
                      ....++++.-+-..++++.--|+|.|.++|--+..+.+.-..+    +...+..+-.. .   -.+-++-++++-    +
T Consensus       114 ~~~~~~l~~~i~~~L~~~d~~Va~~A~~~L~~l~~~~~~~~~l~~~~~~~~L~~l~~~~~~~vR~Rv~el~v~i~----~  189 (503)
T PF10508_consen  114 LLVDNELLPLIIQCLRDPDLSVAKAAIKALKKLASHPEGLEQLFDSNLLSKLKSLMSQSSDIVRCRVYELLVEIA----S  189 (503)
T ss_pred             HhcCccHHHHHHHHHcCCcHHHHHHHHHHHHHHhCCchhHHHHhCcchHHHHHHHHhccCHHHHHHHHHHHHHHH----h
Confidence            4566778888889999999999999999999998876543322    03333333322 1   122233333333    4


Q ss_pred             CchHHHHHHHH--HHHHhhCCCCCCchhh---------HHH------HHHHHhhHHHHHHhhhhcCCccccCCCCCC---
Q psy8357          82 TDTELLIYAMS--LLNKTLNGIPDQDSYY---------DQV------DALEEQGIAAVIRSLDQHGIKYTTSSTDLP---  141 (276)
Q Consensus        82 ~D~EllvyamT--LiNktL~~lpDqDs~y---------D~~------d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q---  141 (276)
                      ...|..-+.+.  ++.+.++.+.+.|-.-         ++.      ..|+++|+=+.+-.+      +..+..|+.   
T Consensus       190 ~S~~~~~~~~~sgll~~ll~eL~~dDiLvqlnalell~~La~~~~g~~yL~~~gi~~~L~~~------l~~~~~dp~~~~  263 (503)
T PF10508_consen  190 HSPEAAEAVVNSGLLDLLLKELDSDDILVQLNALELLSELAETPHGLQYLEQQGIFDKLSNL------LQDSEEDPRLSS  263 (503)
T ss_pred             cCHHHHHHHHhccHHHHHHHHhcCccHHHHHHHHHHHHHHHcChhHHHHHHhCCHHHHHHHH------HhccccCCcccc
Confidence            55666666666  7888888888777433         221      125566554444443      344555541   


Q ss_pred             chhh---hhhcchhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCC
Q psy8357         142 TEPL---VALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEP  218 (276)
Q Consensus       142 ~YiL---rAl~q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~  218 (276)
                      .|+.   +..+.+- .++.-...-.+|..+.-|+++..|......-.|++.+=.++--.| +..++       ..+. .+
T Consensus       264 ~~l~g~~~f~g~la-~~~~~~v~~~~p~~~~~l~~~~~s~d~~~~~~A~dtlg~igst~~-G~~~L-------~~~~-~~  333 (503)
T PF10508_consen  264 LLLPGRMKFFGNLA-RVSPQEVLELYPAFLERLFSMLESQDPTIREVAFDTLGQIGSTVE-GKQLL-------LQKQ-GP  333 (503)
T ss_pred             hhhhhHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHhCCHH-HHHHH-------Hhhc-ch
Confidence            1111   2222222 224444556778889999999999888888888888777763333 33333       1111 12


Q ss_pred             CchHHHHhhcc-CCCCchHHHHHHHHHHHHHhcCCCC
Q psy8357         219 PWSNIMRLLTD-RDSTDTELLIYAMSLLNKTLNGIPD  254 (276)
Q Consensus       219 pwsnlm~lL~~-~d~~D~E~~v~amTLiNktL~~~pd  254 (276)
                      ...+.++-..+ ..++-+|+++.++.-++..+..-++
T Consensus       334 ~~~~~l~~~~~~~~~~~~~lk~r~l~al~~il~~~~~  370 (503)
T PF10508_consen  334 AMKHVLKAIGDAIKSGSTELKLRALHALASILTSGTD  370 (503)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhcCCC
Confidence            33333333322 2356778888888888888766655

26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding

>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells

Probab=81.10  E-value=9.4  Score=38.35  Aligned_cols=110  Identities=15%  Similarity=0.168  Sum_probs=82.6

Q ss_pred             HHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcch
Q psy8357          72 IMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQV  151 (276)
Q Consensus        72 lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~  151 (276)
                      +...|.   .++.|..-.+.-.|.+.+...+-++.         .++....+++.      +..++...+..++++++.+
T Consensus        43 lf~~L~---~~~~e~v~~~~~iL~~~l~~~~~~~l---------~~~~~~~L~~g------L~h~~~~Vr~l~l~~l~~~  104 (503)
T PF10508_consen   43 LFDCLN---TSNREQVELICDILKRLLSALSPDSL---------LPQYQPFLQRG------LTHPSPKVRRLALKQLGRI  104 (503)
T ss_pred             HHHHHh---hcChHHHHHHHHHHHHHHhccCHHHH---------HHHHHHHHHHH------hcCCCHHHHHHHHHHHHHH
Confidence            566674   44777777877888998887764443         23333444443      3445667777777777887


Q ss_pred             hhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccC
Q psy8357         152 MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVES  199 (276)
Q Consensus       152 mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~  199 (276)
                      .-..+|.-.+...++++.-+-.++.++-..|++.|.++|--++.+.+.
T Consensus       105 ~~~~~~~~~~~~~~~l~~~i~~~L~~~d~~Va~~A~~~L~~l~~~~~~  152 (503)
T PF10508_consen  105 ARHSEGAAQLLVDNELLPLIIQCLRDPDLSVAKAAIKALKKLASHPEG  152 (503)
T ss_pred             hcCCHHHHHHhcCccHHHHHHHHHcCCcHHHHHHHHHHHHHHhCCchh
Confidence            777788888899999999999999999999999999999999887653

26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	276
3dad_A	339	Crystal Structure Of The N-Terminal Regulatory Doma		5e-41

>pdb|3DAD|A Chain A, Crystal Structure Of The N-Terminal Regulatory Domains Of The Formin Fhod1 Length = 339

Iteration: 1
 Score =  164 bits (415), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 74/132 (56%), Positives = 105/132 (79%)
Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
           L ALGQ+ML+VDGM G++ H  T+QWLY L AS  RLV+KTALKLLL+FVEY E+N  L 
Sbjct: 181 LRALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLF 240
Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
           I+AV++V ++ G PPW+N++ +L +++  D ELL+Y ++L+NKTL  +PDQDS+YD  DA
Sbjct: 241 IRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDA 300
Query: 265 LEEQGIAAVIRR 276
           LE+QG+ A+++R
Sbjct: 301 LEQQGMEALVQR 312

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	276
3dad_A	339	FH1/FH2 domain-containing protein 1; formin, FHOD1	7e-42
3dad_A	339	FH1/FH2 domain-containing protein 1; formin, FHOD1	2e-39
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens} Length = 339

 Score =  146 bits (368), Expect = 7e-42
 Identities = 77/163 (47%), Positives = 116/163 (71%), Gaps = 7/163 (4%)

Query: 114 LEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYV 173
           +  +G++ +IR           +  +  +  L ALGQ+ML+VDGM G++ H  T+QWLY 
Sbjct: 157 VHSEGLSCLIRVG-------AAADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYT 209

Query: 174 LVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDST 233
           L AS  RLV+KTALKLLL+FVEY E+N  L I+AV++V ++ G PPW+N++ +L +++  
Sbjct: 210 LCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGA 269

Query: 234 DTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRR 276
           D ELL+Y ++L+NKTL  +PDQDS+YD  DALE+QG+ A+++R
Sbjct: 270 DPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQR 312

>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens} Length = 339

 Score =  139 bits (351), Expect = 2e-39
 Identities = 68/126 (53%), Positives = 98/126 (77%)

Query: 1   MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAV 60
           ML+VDGM G++ H  T+QWLY L AS  RLV+KTALKLLL+FVEY E+N  L I+AV++V
Sbjct: 188 MLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSV 247

Query: 61  DNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIA 120
            ++ G PPW+N++ +L +++  D ELL+Y ++L+NKTL  +PDQDS+YD  DALE+QG+ 
Sbjct: 248 ASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGME 307

Query: 121 AVIRSL 126
           A+++  
Sbjct: 308 ALVQRH 313

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 2e-06
 Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 76/251 (30%)

Query: 32  IKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWS-NIMR--------LLTDRDST 82
           I+  L+ LL    Y      LL+     + N       +             LLT R   
Sbjct: 230 IQAELRRLLKSKPYENC---LLV-----LLNV-----QNAKAWNAFNLSCKILLTTRFKQ 276

Query: 83  DTELLIYAMSLLNKTLNGIPDQDSYYDQVDAL-EEQGIAAVIRSLDQHGIKYTTSSTDLP 141
            T+ L  A +  + +L+              L  ++  + +++ LD           DLP
Sbjct: 277 VTDFLS-AATTTHISLD---------HHSMTLTPDEVKSLLLKYLD-------CRPQDLP 319

Query: 142 TE-----PLVALGQVMLYVDGMTG--IMDHPPTVQ-WLYVLVASKFRLVIKTALKLLLIF 193
            E     P             +    I D   T   W +V    K   +I+++L +L   
Sbjct: 320 REVLTTNPRRL---------SIIAESIRDGLATWDNWKHVNC-DKLTTIIESSLNVL--- 366

Query: 194 VEYVESNCFLLIQAVHAV--DNSNGEPPWSNIMRLLTDRDSTDTELLIYAM---SLLNKT 248
                   F  +    +V   +++   P   +  +  D   +D  +++  +   SL+ K 
Sbjct: 367 EPAEYRKMFDRL----SVFPPSAH--IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420

Query: 249 LNGIPDQDSYY 259
               P + +  
Sbjct: 421 ----PKESTIS 427

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	276
3dad_A	339	FH1/FH2 domain-containing protein 1; formin, FHOD1	100.0
3dad_A	339	FH1/FH2 domain-containing protein 1; formin, FHOD1	100.0
3eg5_B	383	Protein diaphanous homolog 1; protein-protein comp	99.8
2f31_A	233	Diaphanous protein homolog 1; formin,MDIA1, protei	99.67
3eg5_B	383	Protein diaphanous homolog 1; protein-protein comp	99.63
2bnx_A	386	Diaphanous protein homolog 1; autoinhibition, acti	99.58
2f31_A	233	Diaphanous protein homolog 1; formin,MDIA1, protei	99.26
2bnx_A	386	Diaphanous protein homolog 1; autoinhibition, acti	99.16
4hxt_A	252	De novo protein OR329; structural genomics, PSI-bi	97.35
4db8_A	252	Armadillo-repeat protein; solenoid repeat, de novo	96.42
4hxt_A	252	De novo protein OR329; structural genomics, PSI-bi	96.31
4db6_A	210	Armadillo repeat protein; solenoid repeat, armadil	96.3
4db8_A	252	Armadillo-repeat protein; solenoid repeat, de novo	96.07
4db6_A	210	Armadillo repeat protein; solenoid repeat, armadil	94.96
3tpo_A	529	Importin subunit alpha-2; nuclear import, protein	94.31
4b8j_A	528	Importin subunit alpha-1A; transport protein, nucl	93.23
2jdq_A	450	Importin alpha-1 subunit; transport, PB2 subunit,	93.06
3ul1_B	510	Importin subunit alpha-2; arm repeat, armadillo re	93.0
1wa5_B	530	Importin alpha subunit; nuclear transport/complex,	92.5
4b8j_A	528	Importin subunit alpha-1A; transport protein, nucl	92.0
1wa5_B	530	Importin alpha subunit; nuclear transport/complex,	90.5
2jdq_A	450	Importin alpha-1 subunit; transport, PB2 subunit,	90.45
3ltm_A	211	Alpha-REP4; protein engineering, heat-like repeat,	90.36
2z6h_A	644	Catenin beta-1, beta-catenin; C-terminal domain, a	87.26
3tpo_A	529	Importin subunit alpha-2; nuclear import, protein	85.93
3ltj_A	201	Alpharep-4; protein engineering, heat-like repeat,	85.81
3b2a_A	265	TON_1937, putative uncharacterized protein; heat-r	85.19
3ltj_A	201	Alpharep-4; protein engineering, heat-like repeat,	84.3
3ltm_A	211	Alpha-REP4; protein engineering, heat-like repeat,	84.27
1jdh_A	529	Beta-catenin; beta-catenin, protein-protein comple	81.56
1xqr_A	296	HSPBP1 protein; armadillo repeat, superhelical twi	81.09

>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.5e-47  Score=360.51  Aligned_cols=160  Identities=48%  Similarity=0.864  Sum_probs=155.2

Q ss_pred             HHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhh
Q psy8357         110 QVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKL  189 (276)
Q Consensus       110 ~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkL  189 (276)
                      +-..++..|+..+++.       .+.+++|+|+|+|||++|+|.||||||||++||++|+|||++++|++++|||+||+|
T Consensus       153 a~EFI~~~GL~~Li~v-------i~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~~~fI~~lyslv~s~~~~V~k~AL~L  225 (339)
T 3dad_A          153 VPEFVHSEGLSCLIRV-------GAAADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKL  225 (339)
T ss_dssp             HHHHHHTTHHHHHHHH-------HTTSCHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHH
T ss_pred             HHHHHHhccHHHHHHH-------HHhcChHHHHHHHHHHHHHHhccccccchhCCHHHHHHHHHHHcCccHHHHHHHHHH
Confidence            5568999999999998       466799999999999999999999999999999999999999999999999999999


Q ss_pred             heeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhh
Q psy8357         190 LLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQG  269 (276)
Q Consensus       190 LlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiNktL~~~pdqds~yd~~d~le~~G  269 (276)
                      |+|||+|+|+|++++++||+++++++|.|||+|+|++|+|+|++|+|+++|||||||++|+++||+|+|||++|+||++|
T Consensus       226 L~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~amtLIN~lL~~apd~d~~~di~d~Le~~g  305 (339)
T 3dad_A          226 LLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQG  305 (339)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHTT
T ss_pred             HHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhC
Q psy8357         270 IAAVIRR  276 (276)
Q Consensus       270 me~i~~r  276 (276)
                      |+++++|
T Consensus       306 i~~~i~r  312 (339)
T 3dad_A          306 MEALVQR  312 (339)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}

Probab=100.00  E-value=3e-43  Score=331.37  Aligned_cols=146  Identities=51%  Similarity=0.903  Sum_probs=139.3

Q ss_pred             CceeccccccccCchhhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCC
Q psy8357           1 MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRD   80 (276)
Q Consensus         1 mlyVDGM~gvi~h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~d   80 (276)
                      |+||||||||++||++|||||++++|++|+|||+||+||+|||||+|+|++++++||+++++++|.|||+++|++|.|+|
T Consensus       188 M~~v~Gm~gvvs~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~  267 (339)
T 3dad_A          188 MLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKN  267 (339)
T ss_dssp             TTSHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTT
T ss_pred             HhccccccchhCCHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhheccc
Q psy8357          81 STDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDG  157 (276)
Q Consensus        81 s~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdG  157 (276)
                      ++|+|+++|||||||++|+++||+|+|||++|+||++||+.+++++      +++.+++.+     -.+|+-+|+.+
T Consensus       268 ~~D~elq~~amtLIN~lL~~apd~d~~~di~d~Le~~gi~~~i~r~------l~~~~~~~~-----l~~Ql~iyE~~  333 (339)
T 3dad_A          268 GADPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQRH------LGTAGTDVD-----LRTQLVLYENA  333 (339)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHTTHHHHHHHH------HSCTTSCHH-----HHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHccHHHHHHHH------HhccCCCHH-----HHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999997      666777754     25899998764

>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*

Probab=99.80  E-value=4.6e-20  Score=174.00  Aligned_cols=185  Identities=15%  Similarity=0.169  Sum_probs=152.0

Q ss_pred             hHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhh---cCCc-cccCCCCCCchhhhhhcchhhecccch
Q psy8357          84 TELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQ---HGIK-YTTSSTDLPTEPLVALGQVMLYVDGMT  159 (276)
Q Consensus        84 ~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~---~~~~-~~~~~tn~q~YiLrAl~q~mlYvdGM~  159 (276)
                      .+-++-.+.-+-+.|..-|-     +-++.+..+|+..++.-+.+   ++.+ ......+.|.|++++++++|-|..||+
T Consensus        81 ~~kl~~~L~sL~v~Lrt~~~-----sWV~~F~~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~G~~  155 (383)
T 3eg5_B           81 DMHLLSCLESLRVSLTSHPV-----SWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIK  155 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHSCH-----HHHHHHHHHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSHHHHH
T ss_pred             chhHHHHHHHHHHHHhhCcc-----HHHHHHHHccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcchhhHH
Confidence            33333445556666755442     22333347788887776542   2211 012334678899999999999999999


Q ss_pred             hhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeecc-Cc-hHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHH
Q psy8357         160 GIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVE-SN-CFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTEL  237 (276)
Q Consensus       160 gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e-~n-~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~  237 (276)
                      .|++||+.|+||+..++|+.+.|.++|+|||.++|.|.+ .| +..+++|+..++..++..+|+++|+.|+  ++.+.|+
T Consensus       156 ~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~--~~~~~e~  233 (383)
T 3eg5_B          156 TMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLK--SGTSIAL  233 (383)
T ss_dssp             HHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHTTS--TTSCHHH
T ss_pred             HHHcChHHHHHHHHHhCCCchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHHHH--ccCcHHH
Confidence            999999999999999999999999999999999999997 66 8899999999999999999999999997  3479999


Q ss_pred             HHHHHHHHHHHhcCCCCCchhhHHHHHHHHhhHHHHHh
Q psy8357         238 LIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIR  275 (276)
Q Consensus       238 ~v~amTLiNktL~~~pdqds~yd~~d~le~~Gme~i~~  275 (276)
                      ++++|+|||..+++.||.+..+.+...|+.+||+++++
T Consensus       234 ~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~  271 (383)
T 3eg5_B          234 KVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQ  271 (383)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCChHHHHH
Confidence            99999999999999999999999999999999999986

>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}

Probab=99.67  E-value=6e-17  Score=142.38  Aligned_cols=187  Identities=15%  Similarity=0.163  Sum_probs=151.4

Q ss_pred             CchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCcccc----CCCCCCchhhhhhcchhheccc
Q psy8357          82 TDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTT----SSTDLPTEPLVALGQVMLYVDG  157 (276)
Q Consensus        82 ~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~----~~tn~q~YiLrAl~q~mlYvdG  157 (276)
                      ...|-++-.+.-+...|..=|-     +-++..+.+|++.++.-+.+..-+-..    ...+.+.++++.++++|-+..|
T Consensus        13 ~~~~~~~~~L~~L~v~Lrt~~~-----~Wv~~F~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn~~~G   87 (233)
T 2f31_A           13 LRDMHLLSCLESLRVSLNNNPV-----SWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFG   87 (233)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSCH-----HHHHHHHHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTSSHHH
T ss_pred             cchHHHHHHHHHHhHhHhcCCc-----HHHHHHHHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhCChHH
Confidence            3444444444445566665552     233334578988887775432110011    1235578999999999999999


Q ss_pred             chhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeecc-Cc-hHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCch
Q psy8357         158 MTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVE-SN-CFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDT  235 (276)
Q Consensus       158 M~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e-~n-~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~  235 (276)
                      ++.|++||+.|.+|....+|+...+.+.|+|||.++|.|.+ ++ +..+.+|+..+...++..+|+.+|+-|.  ++.+.
T Consensus        88 ~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~--~~~~~  165 (233)
T 2f31_A           88 IKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLK--SGTSI  165 (233)
T ss_dssp             HHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTSCTTHHHHHTTS--TTSCH
T ss_pred             HHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCcchHHHHHHHHh--cCChH
Confidence            99999999999999999999999999999999999999998 46 7899999999888888899999999996  46799


Q ss_pred             HHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhhHHHHHh
Q psy8357         236 ELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIR  275 (276)
Q Consensus       236 E~~v~amTLiNktL~~~pdqds~yd~~d~le~~Gme~i~~  275 (276)
                      |.++.+|+|||..+++.||.+....+...+...|++++++
T Consensus       166 e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~  205 (233)
T 2f31_A          166 ALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQ  205 (233)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHH
Confidence            9999999999999999999999999999999999999986

>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*

Probab=99.63  E-value=5.1e-16  Score=146.46  Aligned_cols=212  Identities=15%  Similarity=0.128  Sum_probs=160.3

Q ss_pred             CceeccccccccCchhhhHHHHhhcCcchhHHHHHhhHhheeeeecc-ch-hHHHHHHHHHhhccCCCCCchHHHHhhcc
Q psy8357           1 MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVE-SN-CFLLIQAVHAVDNSNGEPPWSNIMRLLTD   78 (276)
Q Consensus         1 mlyVDGM~gvi~h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e-~n-~~lli~Av~~v~~~~g~~pws~lm~lL~~   78 (276)
                      |-+.+||++|++|+++|+||+..++|+...+.+.|+|||.++|.|.+ .| +..+++|+..+...++..+|+++|+.|. 
T Consensus       148 mN~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~-  226 (383)
T 3eg5_B          148 MNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLK-  226 (383)
T ss_dssp             TSSHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHTTS-
T ss_pred             hcchhhHHHHHcChHHHHHHHHHhCCCchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHHHH-
Confidence            56789999999999999999999999999999999999999999997 77 9999999999999999999999999995 


Q ss_pred             CCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccc
Q psy8357          79 RDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGM  158 (276)
Q Consensus        79 ~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM  158 (276)
                       ++.+.|+.+.+|+|||..+++.||.+..+.+...++..|++++++++++.        ++.   -|  ..|+-.|.+.+
T Consensus       227 -~~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~~lr~~--------~~~---~L--~~Qi~~fe~~~  292 (383)
T 3eg5_B          227 -SGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREI--------ENE---DM--KVQLCVFDEQG  292 (383)
T ss_dssp             -TTSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHTTS--------CCH---HH--HHHHHHHHHHH
T ss_pred             -ccCcHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCChHHHHHHHhcC--------CCh---hH--HHHHHHHHHHH
Confidence             35899999999999999999999999999999999999999999997321        121   23  37888888755


Q ss_pred             hhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHH-hhhcCCCCCchHHHHhhccCCCCchHH
Q psy8357         159 TGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHA-VDNSNGEPPWSNIMRLLTDRDSTDTEL  237 (276)
Q Consensus       159 ~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~-v~~~~~~~pwsnlm~lL~~~d~~D~E~  237 (276)
                      +.=.  .+..+ -|.       . ++         +|++  +..-+.+++.+ +..++..+++-++++-|--.. .|.+.
T Consensus       293 ~eD~--~el~~-r~~-------~-~~---------~d~~--d~~~~~~~l~~~~~~t~a~~~flSiLQhLlli~-~d~~~  349 (383)
T 3eg5_B          293 DEDF--FDLKG-RLD-------D-IR---------MEMD--DFGEVFQIILNTVKDSKAEPHFLSILQHLLLVR-NDYEA  349 (383)
T ss_dssp             HHHH--HHHHH-HHH-------H-HH---------HHCC--SHHHHHHHHHHHTTTSTTHHHHHHHHHHTTCSC-SSCTT
T ss_pred             HHhH--HHHHh-hcc-------c-cC---------cCcC--CHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcc-CCchh
Confidence            3322  11111 111       1 11         3443  33444555444 333444455556655443222 36667


Q ss_pred             HHHHHHHHHHHhc
Q psy8357         238 LIYAMSLLNKTLN  250 (276)
Q Consensus       238 ~v~amTLiNktL~  250 (276)
                      .+--+.||...+.
T Consensus       350 ~~~~~~Lid~~v~  362 (383)
T 3eg5_B          350 RPQYYKLIEECVS  362 (383)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            7777778887765

>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B

Probab=99.58  E-value=1.7e-15  Score=142.87  Aligned_cols=194  Identities=15%  Similarity=0.167  Sum_probs=153.4

Q ss_pred             HHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCcccc----CCCCCCchhhhhh
Q psy8357          73 MRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTT----SSTDLPTEPLVAL  148 (276)
Q Consensus        73 m~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~----~~tn~q~YiLrAl  148 (276)
                      ++-|.+  ....+-++-.+.-+-..|..-|-     +-++..+.+|+..++..+.+..-+-..    ...+.+.++++++
T Consensus        10 v~~L~~--~~~~~~~~~~L~~L~v~Lrt~~~-----~Wv~~F~~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CL   82 (386)
T 2bnx_A           10 IQELRS--GLRDMHLLSCLESLRVSLNNNPV-----SWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCL   82 (386)
T ss_dssp             HHHHTS--CCCHHHHHHHHHHHHHHHHHSCH-----HHHHHHHHHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHH
T ss_pred             HHHHHh--ccchHHHHHHHHHHhHHHhcCCc-----HHHHHHHHhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHH
Confidence            444533  23444333334445555655552     233333578998888776432110011    1234578999999


Q ss_pred             cchhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccC-c-hHHHHHHHHHhhhcCCCCCchHHHHh
Q psy8357         149 GQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVES-N-CFLLIQAVHAVDNSNGEPPWSNIMRL  226 (276)
Q Consensus       149 ~q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~-n-~~l~~~Av~~v~~~~~~~pwsnlm~l  226 (276)
                      +++|-+..|++.|++||+.|.+|....+|+...+.+.|++||.++|.+.+. + +..+++|+..+...++..+|+.+|+-
T Consensus        83 kalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~  162 (386)
T 2bnx_A           83 KAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDG  162 (386)
T ss_dssp             HHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHH
T ss_pred             HHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHhCchhhHHHHHHH
Confidence            999999999999999999999999999999999999999999999999985 4 77899999998877888999999999


Q ss_pred             hccCCCCchHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhhHHHHHh
Q psy8357         227 LTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIR  275 (276)
Q Consensus       227 L~~~d~~D~E~~v~amTLiNktL~~~pdqds~yd~~d~le~~Gme~i~~  275 (276)
                      |.  ++.+.|+++.+|+|||..+++.||.+....+...|...|++++++
T Consensus       163 l~--~~~~~e~~~a~m~lIN~lv~~~~dl~~R~~LR~Ef~~~GL~~il~  209 (386)
T 2bnx_A          163 LK--SGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQ  209 (386)
T ss_dssp             TS--TTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHHHH
T ss_pred             HH--cCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHH
Confidence            96  577999999999999999999999999999999999999999875

>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}

Probab=99.26  E-value=1e-11  Score=109.03  Aligned_cols=144  Identities=13%  Similarity=0.140  Sum_probs=124.6

Q ss_pred             CceeccccccccCchhhhHHHHhhcCcchhHHHHHhhHhheeeeecc-ch-hHHHHHHHHHhhccCCCCCchHHHHhhcc
Q psy8357           1 MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVE-SN-CFLLIQAVHAVDNSNGEPPWSNIMRLLTD   78 (276)
Q Consensus         1 mlyVDGM~gvi~h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e-~n-~~lli~Av~~v~~~~g~~pws~lm~lL~~   78 (276)
                      |-+-.|++.|++|++.|.+|....+|+...+.+.|++||.++|.|++ +. +..+++|+......++..+|..+|+-|. 
T Consensus        82 mn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~-  160 (233)
T 2f31_A           82 MNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLK-  160 (233)
T ss_dssp             TSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTSCTTHHHHHTTS-
T ss_pred             hCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCcchHHHHHHHHh-
Confidence            34567999999999999999999999999999999999999999998 46 9999999999887788899999999995 


Q ss_pred             CCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccc
Q psy8357          79 RDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGM  158 (276)
Q Consensus        79 ~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM  158 (276)
                       ++.+.|+.+.+|++||..+++.||-+.-..+...+...|++++++.+.+.+        +.   -|.  .|+-.|.+-+
T Consensus       161 -~~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~~l~~~~--------~~---~L~--~Qi~~fe~~~  226 (233)
T 2f31_A          161 -SGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIE--------NE---DMK--VQLCVFDEQG  226 (233)
T ss_dssp             -TTSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHHHCC--------CH---HHH--HHHHHHHHHH
T ss_pred             -cCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHHHHhccC--------CH---HHH--HHHHHHHHHH
Confidence             467999999999999999999999899999999999999999999974321        21   233  7777777654


Q ss_pred             h
Q psy8357         159 T  159 (276)
Q Consensus       159 ~  159 (276)
                      +
T Consensus       227 ~  227 (233)
T 2f31_A          227 D  227 (233)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B

Probab=99.16  E-value=6e-11  Score=111.94  Aligned_cols=144  Identities=13%  Similarity=0.137  Sum_probs=126.0

Q ss_pred             CceeccccccccCchhhhHHHHhhcCcchhHHHHHhhHhheeeeeccch--hHHHHHHHHHhhccCCCCCchHHHHhhcc
Q psy8357           1 MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESN--CFLLIQAVHAVDNSNGEPPWSNIMRLLTD   78 (276)
Q Consensus         1 mlyVDGM~gvi~h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n--~~lli~Av~~v~~~~g~~pws~lm~lL~~   78 (276)
                      |=+-.|++.|++|+..|.+|+...+|+...+.+.+++||.++|-|.+.|  +..+++|+......++..+|..+|+-|. 
T Consensus        86 mN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~-  164 (386)
T 2bnx_A           86 MNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLK-  164 (386)
T ss_dssp             TSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTS-
T ss_pred             hCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHhCchhhHHHHHHHHH-
Confidence            3456799999999999999999999999999999999999999999854  8999999999887788899999999995 


Q ss_pred             CCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccc
Q psy8357          79 RDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGM  158 (276)
Q Consensus        79 ~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM  158 (276)
                       ++.+.|+.+.+|+|||..+++.||-+.-..+...+...|++.++.++++.+        +.   .|  ..|+-.|.+-+
T Consensus       165 -~~~~~e~~~a~m~lIN~lv~~~~dl~~R~~LR~Ef~~~GL~~il~~Lr~~~--------~~---~L--~~Qi~~fe~~~  230 (386)
T 2bnx_A          165 -SGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIE--------NE---DM--KVQLCVFDEQG  230 (386)
T ss_dssp             -TTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHHHHHHTTCC--------CH---HH--HHHHHHHHHHH
T ss_pred             -cCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHHHHhccC--------Ch---hH--HHHHHHHHHHH
Confidence             578999999999999999999999999999999999999999999973321        11   23  37888888776


Q ss_pred             h
Q psy8357         159 T  159 (276)
Q Consensus       159 ~  159 (276)
                      +
T Consensus       231 ~  231 (386)
T 2bnx_A          231 D  231 (386)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}

Probab=97.35  E-value=0.001  Score=54.12  Aligned_cols=205  Identities=23%  Similarity=0.184  Sum_probs=138.3

Q ss_pred             hhhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHHHHH
Q psy8357          15 PTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLL   94 (276)
Q Consensus        15 ~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~EllvyamTLi   94 (276)
                      ..+.-|..+..++..-|...|+..|--+....+.+...++++        |  -...++++|.   ++|.++...|...+
T Consensus        44 g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~--------~--~i~~l~~ll~---~~~~~v~~~a~~~L  110 (252)
T 4hxt_A           44 GGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDA--------G--GVEVLVKLLT---STDSEVQKEAARAL  110 (252)
T ss_dssp             THHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT--------T--HHHHHHHHTT---CSSHHHHHHHHHHH
T ss_pred             CCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHC--------C--CHHHHHHHHc---CCCHHHHHHHHHHH
Confidence            456677777777777777777777776665555554444321        1  1234888885   47899999988766


Q ss_pred             HHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHHHh
Q psy8357          95 NKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVL  174 (276)
Q Consensus        95 NktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLYsL  174 (276)
                      ..-...-   +...+.  -.+..+++.+++.+       ..++.+.+..++++++++....++....+.+...++.|-.+
T Consensus       111 ~~l~~~~---~~~~~~--~~~~~~i~~L~~~l-------~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~l  178 (252)
T 4hxt_A          111 ANIASGP---DEAIKA--IVDAGGVEVLVKLL-------TSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKL  178 (252)
T ss_dssp             HHHTTSC---HHHHHH--HHHTTHHHHHHHHT-------TCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHH
T ss_pred             HHHHcCC---HHHHHH--HHHCCCHHHHHHHH-------cCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHH
Confidence            6554322   222222  34456788877774       33445677788899999887666665555567899999999


Q ss_pred             hcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHHhcCCCC
Q psy8357         175 VASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPD  254 (276)
Q Consensus       175 ~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiNktL~~~pd  254 (276)
                      ..++...|.+.|+..|--++..++++...+++       .   .-...+++++.   ++|.+++..|...+-.....-|.
T Consensus       179 l~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~-------~---~~i~~L~~ll~---~~~~~v~~~a~~~L~~l~~~~~~  245 (252)
T 4hxt_A          179 LTSTDSEVQKEAARALANIASGPTSAIKAIVD-------A---GGVEVLQKLLT---STDSEVQKEAQRALENIKSGGWL  245 (252)
T ss_dssp             TTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHH-------T---THHHHHHHGGG---CSCHHHHHHHHHHHHHHHHTCBC
T ss_pred             HCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH-------C---CCHHHHHHHHC---CCcHHHHHHHHHHHHHHHcCCCc
Confidence            99988899999999998887655433333222       1   23457888886   57889999999988887776665


Q ss_pred             Cch
Q psy8357         255 QDS  257 (276)
Q Consensus       255 qds  257 (276)
                      ...
T Consensus       246 ~~~  248 (252)
T 4hxt_A          246 EHH  248 (252)
T ss_dssp             CC-
T ss_pred             ccc
Confidence            543

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}

Probab=96.42  E-value=0.0052  Score=50.68  Aligned_cols=194  Identities=16%  Similarity=0.146  Sum_probs=125.2

Q ss_pred             hhhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHHHHH
Q psy8357          15 PTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLL   94 (276)
Q Consensus        15 ~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~EllvyamTLi   94 (276)
                      ..|.-|..+..++..-|...|+..|--++...+.|...++++        |  -...++++|.   +++.++.-.|...+
T Consensus        54 g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~--------g--~i~~L~~lL~---~~~~~v~~~a~~~L  120 (252)
T 4db8_A           54 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA--------G--ALPALVQLLS---SPNEQILQEALWAL  120 (252)
T ss_dssp             THHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT--------T--HHHHHHHGGG---CSCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHc--------C--CHHHHHHHHc---CCCHHHHHHHHHHH
Confidence            456667777777666677777777766665555555444331        1  1356788885   36789988887755


Q ss_pred             HHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHHHh
Q psy8357          95 NKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVL  174 (276)
Q Consensus        95 NktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLYsL  174 (276)
                      ..-.    ..+... .....+..+++.+++.+       ..++.+.+..++.|++++....+.-...+.....+.-|-.+
T Consensus       121 ~~l~----~~~~~~-~~~~~~~~~i~~L~~lL-------~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~l  188 (252)
T 4db8_A          121 SNIA----SGGNEQ-IQAVIDAGALPALVQLL-------SSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQL  188 (252)
T ss_dssp             HHHT----TSCHHH-HHHHHHTTHHHHHHHGG-------GCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHG
T ss_pred             HHhh----cCCchH-HHHHHHCCCHHHHHHHH-------hCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHH
Confidence            4432    222222 11235566788877775       33444567778888888876555444444556788899999


Q ss_pred             hcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHH
Q psy8357         175 VASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLN  246 (276)
Q Consensus       175 ~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiN  246 (276)
                      ..++...|.+.|+..|--++..++.+...+++        .|  -...++++|.   ++|.+++-.|...+-
T Consensus       189 l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~--------~g--~i~~L~~ll~---~~~~~v~~~A~~~L~  247 (252)
T 4db8_A          189 LSSPNEQILQEALWALSNIASGGNEQKQAVKE--------AG--ALEKLEQLQS---HENEKIQKEAQEALE  247 (252)
T ss_dssp             GGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHH--------TT--HHHHHHTTTT---CSSSHHHHTHHHHHH
T ss_pred             HCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHH--------CC--cHHHHHHHhC---CCCHHHHHHHHHHHH
Confidence            99988889999999998887554434333332        11  2356788885   568899888877553

>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}

Probab=96.31  E-value=0.0064  Score=49.35  Aligned_cols=198  Identities=24%  Similarity=0.223  Sum_probs=133.5

Q ss_pred             hhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHHHHHH
Q psy8357          16 TVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLN   95 (276)
Q Consensus        16 tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~EllvyamTLiN   95 (276)
                      .|..|..+..|+..-+...|++.|--+....+.|...++++        |  -...++++|.   ++|.++...|...+.
T Consensus         3 ~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~--------g--~i~~L~~ll~---~~~~~v~~~a~~~L~   69 (252)
T 4hxt_A            3 DVEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDA--------G--GVEVLVKLLT---STDSEVQKEAARALA   69 (252)
T ss_dssp             HHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHT--------T--HHHHHHHHTT---CSCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHC--------C--CHHHHHHHHh---CCCHHHHHHHHHHHH
Confidence            46778888888888888899998887766666565555442        1  1356788885   467888888777554


Q ss_pred             HhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHHHhh
Q psy8357          96 KTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLV  175 (276)
Q Consensus        96 ktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLYsL~  175 (276)
                      .-...   .+...+.  ..+..+++.+++.+       ..++.+.+..++.+++++--..+.....+.....+..|-.+.
T Consensus        70 ~l~~~---~~~~~~~--~~~~~~i~~l~~ll-------~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l  137 (252)
T 4hxt_A           70 NIASG---PDEAIKA--IVDAGGVEVLVKLL-------TSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLL  137 (252)
T ss_dssp             HHTTS---CHHHHHH--HHHTTHHHHHHHHT-------TCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHT
T ss_pred             HHHcC---ChHHHHH--HHHCCCHHHHHHHH-------cCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHH
Confidence            43321   1333333  34566778777774       334456677788888888754443333344457888999999


Q ss_pred             cCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHHhcC
Q psy8357         176 ASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNG  251 (276)
Q Consensus       176 ~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiNktL~~  251 (276)
                      .+....|.+.|+..|--++...+.+...+++        .|  -...++++|.   ++|.+++..|...+-....+
T Consensus       138 ~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~--------~~--~i~~L~~ll~---~~~~~v~~~a~~~L~~l~~~  200 (252)
T 4hxt_A          138 TSTDSEVQKEAARALANIASGPDEAIKAIVD--------AG--GVEVLVKLLT---STDSEVQKEAARALANIASG  200 (252)
T ss_dssp             TCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH--------TT--HHHHHHHHTT---CSCHHHHHHHHHHHHHHTTS
T ss_pred             cCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH--------Cc--CHHHHHHHHC---CCCHHHHHHHHHHHHHHHcC
Confidence            9888889999999988877665544333222        11  2356888886   67889999999887776654

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A

Probab=96.30  E-value=0.0072  Score=48.61  Aligned_cols=198  Identities=16%  Similarity=0.172  Sum_probs=133.3

Q ss_pred             CchhhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHHH
Q psy8357          13 HPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMS   92 (276)
Q Consensus        13 h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~EllvyamT   92 (276)
                      ..+...-|..|..|+..-|...|+..|--+...++.+...++++        |  -...++++|.   ++|.++...|..
T Consensus        10 ~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~--------g--~i~~L~~lL~---~~~~~v~~~a~~   76 (210)
T 4db6_A           10 HGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDA--------G--ALPALVQLLS---SPNEQILQEALW   76 (210)
T ss_dssp             ---CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHT--------T--HHHHHHHHTT---CSCHHHHHHHHH
T ss_pred             ccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHc--------C--CHHHHHHHHc---CCCHHHHHHHHH
Confidence            34556678888899988899999999888876666665554432        1  2447888885   468899888776


Q ss_pred             HHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHH
Q psy8357          93 LLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLY  172 (276)
Q Consensus        93 LiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLY  172 (276)
                      .+-.-..+   .+...+.  -.+..+++.+++.+       ..++.+.+..+..|++++....+.....+-+...+..|-
T Consensus        77 ~L~~l~~~---~~~~~~~--i~~~g~i~~L~~lL-------~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~  144 (210)
T 4db6_A           77 ALSNIASG---GNEQIQA--VIDAGALPALVQLL-------SSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALV  144 (210)
T ss_dssp             HHHHHTTS---CHHHHHH--HHHTTCHHHHHHHT-------TCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHH
T ss_pred             HHHHHhcC---CcHHHHH--HHHCCCHHHHHHHH-------cCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHH
Confidence            55443322   2333333  35667888888885       334445666778888888765444433444567889999


Q ss_pred             HhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHH
Q psy8357         173 VLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKT  248 (276)
Q Consensus       173 sL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiNkt  248 (276)
                      .+..++...|.+.|+..|--++...+.+...+++        .|  -...++++|.   ++|.+++-.|...+...
T Consensus       145 ~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~--------~g--~i~~L~~ll~---~~~~~v~~~a~~aL~~l  207 (210)
T 4db6_A          145 QLLSSPNEQILQEALWALSNIASGGNEQKQAVKE--------AG--ALEKLEQLQS---HENEKIQKEAQEALEKL  207 (210)
T ss_dssp             HHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHH--------TT--HHHHHHHGGG---CSCHHHHHHHHHHHHHH
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHH--------CC--CHHHHHHHHh---CCCHHHHHHHHHHHHHH
Confidence            9999888889999999888887765544332221        12  3456788886   57899999888876543

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}

Probab=96.07  E-value=0.065  Score=44.02  Aligned_cols=204  Identities=16%  Similarity=0.164  Sum_probs=134.0

Q ss_pred             cCchhhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHH
Q psy8357          12 DHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAM   91 (276)
Q Consensus        12 ~h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~Ellvyam   91 (276)
                      ..++...|++.+..|+..-+...|++.|--+....+.|...++++        |  --..++++|.   +++.++...|.
T Consensus         9 ~~~~~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~--------g--~i~~L~~lL~---~~~~~v~~~a~   75 (252)
T 4db8_A            9 HHGSELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDA--------G--ALPALVQLLS---SPNEQILQEAL   75 (252)
T ss_dssp             CTTCSHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHT--------T--HHHHHHHGGG---CSCHHHHHHHH
T ss_pred             cccchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHc--------C--cHHHHHHHHc---CCCHHHHHHHH
Confidence            356678899999999988888888888843322244454444331        2  2456888885   45689999888


Q ss_pred             HHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHH
Q psy8357          92 SLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWL  171 (276)
Q Consensus        92 TLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwL  171 (276)
                      ..+..-..+-   +...+.  ..+..|++.+++.+       ..+..+.+..++.|++++-...+.....+.....+..|
T Consensus        76 ~~L~~l~~~~---~~~~~~--i~~~g~i~~L~~lL-------~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L  143 (252)
T 4db8_A           76 WALSNIASGG---NEQIQA--VIDAGALPALVQLL-------SSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPAL  143 (252)
T ss_dssp             HHHHHHTTSC---HHHHHH--HHHTTHHHHHHHGG-------GCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHH
T ss_pred             HHHHHHhcCC---HHHHHH--HHHcCCHHHHHHHH-------cCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHH
Confidence            7655443322   223322  35566788877775       33444566777888888866555542444556788888


Q ss_pred             HHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHHhcC
Q psy8357         172 YVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNG  251 (276)
Q Consensus       172 YsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiNktL~~  251 (276)
                      -.+..+....|.+.|+..|--++...+.+...+++       .   .-...++++|.   ++|.+++..|...+-....+
T Consensus       144 ~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~-------~---~~i~~L~~ll~---~~~~~v~~~a~~~L~~l~~~  210 (252)
T 4db8_A          144 VQLLSSPNEQILQEALWALSNIASGGNEQIQAVID-------A---GALPALVQLLS---SPNEQILQEALWALSNIASG  210 (252)
T ss_dssp             HHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH-------T---TCHHHHHHGGG---CSSHHHHHHHHHHHHHHTTS
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHH-------C---CCHHHHHHHHC---CCCHHHHHHHHHHHHHHhcC
Confidence            88988888888899988887776554433332221       1   23457899996   56999999999877766644


Q ss_pred             CC
Q psy8357         252 IP  253 (276)
Q Consensus       252 ~p  253 (276)
                      -|
T Consensus       211 ~~  212 (252)
T 4db8_A          211 GN  212 (252)
T ss_dssp             CH
T ss_pred             CH
Confidence            33

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A

Probab=94.96  E-value=0.077  Score=42.49  Aligned_cols=154  Identities=18%  Similarity=0.181  Sum_probs=96.7

Q ss_pred             hhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHHHHHH
Q psy8357          16 TVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLN   95 (276)
Q Consensus        16 tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~EllvyamTLiN   95 (276)
                      .++-|-.+..++..-|...|+..|--++...+.+...++++        |  -...++++|.   ++|.++...|...+.
T Consensus        55 ~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~--------g--~i~~L~~lL~---~~~~~v~~~a~~~L~  121 (210)
T 4db6_A           55 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA--------G--ALPALVQLLS---SPNEQILQEALWALS  121 (210)
T ss_dssp             HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT--------T--CHHHHHHHTT---CSCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHC--------C--CHHHHHHHHc---CCcHHHHHHHHHHHH
Confidence            45555566666555566666666555544444443333321        2  2456888885   568899999887666


Q ss_pred             HhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHHHhh
Q psy8357          96 KTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLV  175 (276)
Q Consensus        96 ktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLYsL~  175 (276)
                      .-..+-|   ...+.  .++..+++.+++.+       ..++.+.+..++.|++++....+.....+.....++.|-.+.
T Consensus       122 ~l~~~~~---~~~~~--~~~~~~i~~L~~ll-------~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll  189 (210)
T 4db6_A          122 NIASGGN---EQIQA--VIDAGALPALVQLL-------SSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQ  189 (210)
T ss_dssp             HHTTSCH---HHHHH--HHHTTHHHHHHHHT-------TCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGG
T ss_pred             HHHcCCH---HHHHH--HHHcCcHHHHHHHH-------cCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHH
Confidence            5543222   22111  24566778877774       334556778888889988876444444445557888999999


Q ss_pred             cCCchhHHHHHHhhheeeE
Q psy8357         176 ASKFRLVIKTALKLLLIFV  194 (276)
Q Consensus       176 ~S~~rlVvKtaLkLLlVfv  194 (276)
                      .+....|.+.|+..|--++
T Consensus       190 ~~~~~~v~~~a~~aL~~l~  208 (210)
T 4db6_A          190 SHENEKIQKEAQEALEKLQ  208 (210)
T ss_dssp             GCSCHHHHHHHHHHHHHHC
T ss_pred             hCCCHHHHHHHHHHHHHHh
Confidence            8888888888888775443

>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B

Probab=94.31  E-value=0.088  Score=49.57  Aligned_cols=176  Identities=13%  Similarity=0.167  Sum_probs=99.7

Q ss_pred             chHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhh
Q psy8357          69 WSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVAL  148 (276)
Q Consensus        69 ws~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl  148 (276)
                      -..++++|.   +++.++...|...+-.-..+-   |.....  -++..++..+++-       +..++.+.+..+..|+
T Consensus       295 i~~Lv~lL~---~~~~~v~~~a~~aL~nl~~~~---~~~~~~--i~~~g~l~~L~~L-------L~~~~~~i~~~a~~aL  359 (529)
T 3tpo_A          295 VPQLVKLLG---ATELPIVTPALRAIGNIVTGT---DEQTQK--VIDAGALAVFPSL-------LTNPKTNIQKEATWTM  359 (529)
T ss_dssp             HHHHHHHHT---CSCHHHHHHHHHHHHHHTTSC---HHHHHH--HHHTTGGGGHHHH-------TTCSSHHHHHHHHHHH
T ss_pred             hHHHHHHhc---CCChhHHHHHHHHHHHHHccc---hHHHHH--HhhcccHHHHHHH-------HcCCCHHHHHHHHHHH
Confidence            346888884   678888888877654443322   111111  2344555555554       3344455666777777


Q ss_pred             cchhhecc-cchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhh
Q psy8357         149 GQVMLYVD-GMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLL  227 (276)
Q Consensus       149 ~q~mlYvd-GM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL  227 (276)
                      +++-.... ....++. ...+..|-.+..+...-|.+.|...|--++....  .    +-+.......+.   ..|+++|
T Consensus       360 ~nl~~~~~~~~~~v~~-~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~--~----~~~~~l~~~g~i---~~L~~LL  429 (529)
T 3tpo_A          360 SNITAGRQDQIQQVVN-HGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGT--V----EQIVYLVHCGII---EPLMNLL  429 (529)
T ss_dssp             HHHHTSCHHHHHHHHH-TTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSC--H----HHHHHHHHTTCH---HHHHHGG
T ss_pred             HHHhcccHHHHHHHHh-cCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCC--H----HHHHHHHHCcCH---HHHHHHh
Confidence            77655322 2333333 3567777777777776777777666543332211  0    111112223333   3588899


Q ss_pred             ccCCCCchHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhh-HHH
Q psy8357         228 TDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQG-IAA  272 (276)
Q Consensus       228 ~~~d~~D~E~~v~amTLiNktL~~~pdqds~yd~~d~le~~G-me~  272 (276)
                      .   +.|.++...++..|...|...+...........+|+.| +++
T Consensus       430 ~---~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~  472 (529)
T 3tpo_A          430 S---AKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDK  472 (529)
T ss_dssp             G---CSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHH
T ss_pred             c---CCCHHHHHHHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHH
Confidence            6   78999999999888888765443333334444566654 443

>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A

Probab=93.23  E-value=0.24  Score=45.70  Aligned_cols=156  Identities=13%  Similarity=0.122  Sum_probs=93.9

Q ss_pred             chHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHH-HHHhhHHHHHHhhhhcCCccccC-CCCCCchhhh
Q psy8357          69 WSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA-LEEQGIAAVIRSLDQHGIKYTTS-STDLPTEPLV  146 (276)
Q Consensus        69 ws~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~-Le~~Gme~i~~~~~~~~~~~~~~-~tn~q~YiLr  146 (276)
                      ...++++|.   +++.++...|...+.....+-+      +.+.. ++..++..+++.+       ..+ +...+..+..
T Consensus       288 v~~Lv~lL~---~~~~~v~~~a~~~L~nl~~~~~------~~~~~~~~~~~l~~L~~lL-------~~~~~~~v~~~A~~  351 (528)
T 4b8j_A          288 CPRLVELLL---HPSPSVLIPALRTVGNIVTGDD------AQTQCIIDHQALPCLLSLL-------TQNLKKSIKKEACW  351 (528)
T ss_dssp             HHHHHHHTT---CSCHHHHHHHHHHHHHHTTSCH------HHHHHHHTTTHHHHHHHHH-------HSCCCHHHHHHHHH
T ss_pred             HHHHHHHHc---CCChhHHHHHHHHHHHHHcCCH------HHHHHHHHhhhHHHHHHHH-------cCCCcHHHHHHHHH
Confidence            457888885   4577888888776655544332      12222 3445566666654       223 4455667777


Q ss_pred             hhcchhheccc-chhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeec-cCchHHHHHHHHHhhhcCCCCCchHHH
Q psy8357         147 ALGQVMLYVDG-MTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYV-ESNCFLLIQAVHAVDNSNGEPPWSNIM  224 (276)
Q Consensus       147 Al~q~mlYvdG-M~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~-e~n~~l~~~Av~~v~~~~~~~pwsnlm  224 (276)
                      +++++...... ...++ ....+..|..+..+....|.+.|+..|--++... ..+...       +...   .--..++
T Consensus       352 ~L~nl~~~~~~~~~~~~-~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~-------l~~~---~~i~~L~  420 (528)
T 4b8j_A          352 TISNITAGNKDQIQAVI-NAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKY-------LVSE---GCIKPLC  420 (528)
T ss_dssp             HHHHHHTSCHHHHHHHH-HTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHH-------HHHT---TCHHHHH
T ss_pred             HHHHHHCCCHHHHHHHH-HCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHH-------HHHC---CCHHHHH
Confidence            88877653221 22222 2355677777777777777787777776554431 111111       1112   2345688


Q ss_pred             HhhccCCCCchHHHHHHHHHHHHHhcCCCC
Q psy8357         225 RLLTDRDSTDTELLIYAMSLLNKTLNGIPD  254 (276)
Q Consensus       225 ~lL~~~d~~D~E~~v~amTLiNktL~~~pd  254 (276)
                      ++|.   +.|.++...++..+...+...+.
T Consensus       421 ~lL~---~~d~~v~~~al~~L~~l~~~~~~  447 (528)
T 4b8j_A          421 DLLI---CPDIRIVTVCLEGLENILKVGET  447 (528)
T ss_dssp             HGGG---CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHc---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            8896   57899999999999888876554

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A

Probab=93.06  E-value=0.33  Score=42.82  Aligned_cols=155  Identities=13%  Similarity=0.110  Sum_probs=96.2

Q ss_pred             chHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHH-HHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhh
Q psy8357          69 WSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVD-ALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVA  147 (276)
Q Consensus        69 ws~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d-~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrA  147 (276)
                      ...++++|.   +.|.++...|...+.....+-++      ... .++..+++.+++.+       ..++.+.+..+++|
T Consensus       236 i~~L~~ll~---~~~~~v~~~a~~~L~~l~~~~~~------~~~~~~~~~~l~~L~~ll-------~~~~~~vr~~a~~~  299 (450)
T 2jdq_A          236 CRRLVELLM---HNDYKVVSPALRAVGNIVTGDDI------QTQVILNCSALQSLLHLL-------SSPKESIKKEACWT  299 (450)
T ss_dssp             HHHHHHHTT---CSCHHHHHHHHHHHHHHTTSCHH------HHHHHHTTTHHHHHHHHT-------TCSSHHHHHHHHHH
T ss_pred             HHHHHHHHC---CCchhHHHHHHHHHHHHhhCChH------HHHHHHHCccHHHHHHHH-------cCCCHHHHHHHHHH
Confidence            457888885   46789998888766655443321      122 23445666666664       33344556677888


Q ss_pred             hcchhh-ecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEee-ccCchHHHHHHHHHhhhcCCCCCchHHHH
Q psy8357         148 LGQVML-YVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEY-VESNCFLLIQAVHAVDNSNGEPPWSNIMR  225 (276)
Q Consensus       148 l~q~ml-YvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey-~e~n~~l~~~Av~~v~~~~~~~pwsnlm~  225 (276)
                      ++++.. ..+....+++ ...+..|..+..++...|.+.|...|--++.. +..+.       +.+-.+.   --..+++
T Consensus       300 L~~l~~~~~~~~~~~~~-~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~-------~~l~~~~---~i~~L~~  368 (450)
T 2jdq_A          300 ISNITAGNRAQIQTVID-ANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQI-------KYLVELG---CIKPLCD  368 (450)
T ss_dssp             HHHHTTSCHHHHHHHHH-TTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHH-------HHHHHHT---CHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHH-CCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHH-------HHHHHCC---CHHHHHH
Confidence            888764 3344444443 36777888887777777888887777665443 11111       1111122   2346888


Q ss_pred             hhccCCCCchHHHHHHHHHHHHHhcCCC
Q psy8357         226 LLTDRDSTDTELLIYAMSLLNKTLNGIP  253 (276)
Q Consensus       226 lL~~~d~~D~E~~v~amTLiNktL~~~p  253 (276)
                      +|.   ..|.+++..|+..+...+...|
T Consensus       369 ll~---~~~~~v~~~a~~aL~~l~~~~~  393 (450)
T 2jdq_A          369 LLT---VMDSKIVQVALNGLENILRLGE  393 (450)
T ss_dssp             GGG---SSCHHHHHHHHHHHHHHHHHHH
T ss_pred             Hhc---CCCHHHHHHHHHHHHHHHHhch
Confidence            886   4589999999988887776554

>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...

Probab=93.00  E-value=0.15  Score=47.91  Aligned_cols=168  Identities=14%  Similarity=0.208  Sum_probs=92.0

Q ss_pred             hHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHH-HHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhh
Q psy8357          70 SNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA-LEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVAL  148 (276)
Q Consensus        70 s~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~-Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl  148 (276)
                      ..++++|.   +++.++...|...+-.-..+-   |.   .+.. ++..++..+++-       +..++.+.+..+..|+
T Consensus       277 ~~Lv~lL~---~~~~~v~~~al~aL~nl~~~~---~~---~~~~i~~~g~l~~L~~L-------L~~~~~~v~~~A~~aL  340 (510)
T 3ul1_B          277 PQLVKLLG---ATELPIVTPALRAIGNIVTGT---DE---QTQKVIDAGALAVFPSL-------LTNPKTNIQKEATWTM  340 (510)
T ss_dssp             HHHHHHHT---CSCHHHHHHHHHHHHHHTTSC---HH---HHHHHHHTTGGGGCC-C-------TTCSSHHHHHHHHHHH
T ss_pred             hhhhhhhc---CCChhhhhHHHHHHHHhhcCC---HH---HHHHHhhccchHHHHHH-------hcCCCHHHHHHHHHHH
Confidence            45888884   578888888776554433321   11   1222 333334333332       3444455666677777


Q ss_pred             cchhhecc-cchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhh
Q psy8357         149 GQVMLYVD-GMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLL  227 (276)
Q Consensus       149 ~q~mlYvd-GM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL  227 (276)
                      +++..... ....++. ...+..|..+..+.-.-|-|.|...|--++.... .     +-+........   -..++++|
T Consensus       341 ~nl~a~~~~~~~~v~~-~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~-~-----~~~~~L~~~g~---i~~L~~LL  410 (510)
T 3ul1_B          341 SNITAGRQDQIQQVVN-HGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGT-V-----EQIVYLVHCGI---IEPLMNLL  410 (510)
T ss_dssp             HHHTTSCHHHHHHHHH-TTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCC-H-----HHHHHHHHTTC---HHHHHHGG
T ss_pred             HHHHcCcHHHHHHHHh-cCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCC-H-----HHHHHHHHCCC---HHHHHHHh
Confidence            77754322 2333333 3566777777777666676766655533322111 0     11111222233   34588899


Q ss_pred             ccCCCCchHHHHHHHHHHHHHhcC---CCCCchhhHHHHHHHHhh
Q psy8357         228 TDRDSTDTELLIYAMSLLNKTLNG---IPDQDSYYDQVDALEEQG  269 (276)
Q Consensus       228 ~~~d~~D~E~~v~amTLiNktL~~---~pdqds~yd~~d~le~~G  269 (276)
                      +   +.|.++...++..|...|..   .+..+.|.   ..+|+.|
T Consensus       411 ~---~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~---~~iee~g  449 (510)
T 3ul1_B          411 S---AKDTKIIQVILDAISNIFQAAEKLGETEKLS---IMIEECG  449 (510)
T ss_dssp             G---CSCHHHHHHHHHHHHHHHHHHHTTTCHHHHH---HHHHHTT
T ss_pred             c---CCCHHHHHHHHHHHHHHHHHhHhccchHHHH---HHHHHcC
Confidence            6   78999999999988887764   34444443   3455554

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A

Probab=92.50  E-value=0.45  Score=44.10  Aligned_cols=155  Identities=17%  Similarity=0.122  Sum_probs=97.2

Q ss_pred             chHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhh
Q psy8357          69 WSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVAL  148 (276)
Q Consensus        69 ws~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl  148 (276)
                      ...++++|.   ++|.++...|...+..-..+-|+  .   .-..++..++..+++.+       ..+..+.+..+++++
T Consensus       259 l~~L~~lL~---~~d~~v~~~a~~~L~~L~~~~~~--~---~~~~~~~~~v~~Lv~lL-------~~~~~~v~~~a~~~L  323 (530)
T 1wa5_B          259 LPTLAKLIY---SMDTETLVDACWAISYLSDGPQE--A---IQAVIDVRIPKRLVELL-------SHESTLVQTPALRAV  323 (530)
T ss_dssp             HHHHHHHTT---CCCHHHHHHHHHHHHHHHSSCHH--H---HHHHHHTTCHHHHHHGG-------GCSCHHHHHHHHHHH
T ss_pred             HHHHHHHHc---CCCHHHHHHHHHHHHHHhCCCHH--H---HHHHHhcCcHHHHHHHH-------CCCChhhHHHHHHHH
Confidence            346777884   46789998887766555443221  1   11134456777777775       223345566788888


Q ss_pred             cchhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhc
Q psy8357         149 GQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLT  228 (276)
Q Consensus       149 ~q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~  228 (276)
                      +++.-..+.....+-+...+..|-.+..++...|.+.|+..|--++..+.....-       +-.+   .-...++++|.
T Consensus       324 ~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~-------~~~~---~~l~~L~~lL~  393 (530)
T 1wa5_B          324 GNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQA-------VIDA---NLIPPLVKLLE  393 (530)
T ss_dssp             HHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH-------HHHT---TCHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHH-------HHHC---CCHHHHHHHHh
Confidence            8876543332222333467888888888888888899988887776544322221       1112   23567888886


Q ss_pred             cCCCCchHHHHHHHHHHHHHhcC
Q psy8357         229 DRDSTDTELLIYAMSLLNKTLNG  251 (276)
Q Consensus       229 ~~d~~D~E~~v~amTLiNktL~~  251 (276)
                         .+|.+++-.|...|.....+
T Consensus       394 ---~~~~~v~~~a~~aL~~l~~~  413 (530)
T 1wa5_B          394 ---VAEYKTKKEACWAISNASSG  413 (530)
T ss_dssp             ---HSCHHHHHHHHHHHHHHHHH
T ss_pred             ---cCCHHHHHHHHHHHHHHHhc
Confidence               46889988887777666554

>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A

Probab=92.00  E-value=0.32  Score=44.90  Aligned_cols=156  Identities=15%  Similarity=0.124  Sum_probs=98.8

Q ss_pred             chHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhh
Q psy8357          69 WSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVAL  148 (276)
Q Consensus        69 ws~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl  148 (276)
                      -..++++|.  ++.+.++.-.|...+..-..+-|.....      ....++..+++.+       .....+.+..++.|+
T Consensus       204 l~~Ll~lL~--~~~~~~v~~~a~~~L~~L~~~~~~~~~~------~~~~~l~~L~~lL-------~~~~~~v~~~a~~aL  268 (528)
T 4b8j_A          204 LLPLLAQLN--EHTKLSMLRNATWTLSNFCRGKPQPSFE------QTRPALPALARLI-------HSNDEEVLTDACWAL  268 (528)
T ss_dssp             HHHHHHTCC--TTCCHHHHHHHHHHHHHHHCSSSCCCHH------HHTTHHHHHHHHT-------TCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHh--cCCCHHHHHHHHHHHHHHHcCCCCCcHH------HHHHHHHHHHHHH-------CCCCHHHHHHHHHHH
Confidence            346777884  3578888888887777666655554332      2366777777764       333445566777788


Q ss_pred             cchhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhc
Q psy8357         149 GQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLT  228 (276)
Q Consensus       149 ~q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~  228 (276)
                      +.+....+..-..+-....+..|-.+..++...|...|+..|--++...+.....++       . .  .-...++++|.
T Consensus       269 ~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~-------~-~--~~l~~L~~lL~  338 (528)
T 4b8j_A          269 SYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCII-------D-H--QALPCLLSLLT  338 (528)
T ss_dssp             HHHTSSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH-------T-T--THHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHH-------H-h--hhHHHHHHHHc
Confidence            877655544433444557788888998888888888888888666543332221111       1 1  22446788886


Q ss_pred             cCCCCchHHHHHHHHHHHHHhcC
Q psy8357         229 DRDSTDTELLIYAMSLLNKTLNG  251 (276)
Q Consensus       229 ~~d~~D~E~~v~amTLiNktL~~  251 (276)
                        ++.+.+++..|.-.|.....+
T Consensus       339 --~~~~~~v~~~A~~~L~nl~~~  359 (528)
T 4b8j_A          339 --QNLKKSIKKEACWTISNITAG  359 (528)
T ss_dssp             --SCCCHHHHHHHHHHHHHHHTS
T ss_pred             --CCCcHHHHHHHHHHHHHHHCC
Confidence              222788888887766665554

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A

Probab=90.50  E-value=1.2  Score=41.23  Aligned_cols=160  Identities=11%  Similarity=0.051  Sum_probs=92.2

Q ss_pred             chHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhh
Q psy8357          69 WSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVAL  148 (276)
Q Consensus        69 ws~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl  148 (276)
                      -..++++|.   +++.++...|...+-.-..+-+   .....  .++..++..+++.+       ..+....+..++.|+
T Consensus       301 v~~Lv~lL~---~~~~~v~~~a~~~L~~l~~~~~---~~~~~--~~~~~~l~~L~~lL-------~~~~~~vr~~A~~aL  365 (530)
T 1wa5_B          301 PKRLVELLS---HESTLVQTPALRAVGNIVTGND---LQTQV--VINAGVLPALRLLL-------SSPKENIKKEACWTI  365 (530)
T ss_dssp             HHHHHHGGG---CSCHHHHHHHHHHHHHHTTSCH---HHHHH--HHHTTHHHHHHHHT-------TCSCHHHHHHHHHHH
T ss_pred             HHHHHHHHC---CCChhhHHHHHHHHHHHHcCCH---HHHHH--HHHcchHHHHHHHH-------cCCCHHHHHHHHHHH
Confidence            456888885   4678888888776654443322   11111  24456666666664       223334555667777


Q ss_pred             cchhhe-cccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhh
Q psy8357         149 GQVMLY-VDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLL  227 (276)
Q Consensus       149 ~q~mlY-vdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL  227 (276)
                      +++... .+....++ ....+..|..+..++...|.+.|+..|--++...... +-..   +.+....   --..++++|
T Consensus       366 ~~l~~~~~~~~~~~~-~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~-~~~~---~~l~~~~---~l~~L~~ll  437 (530)
T 1wa5_B          366 SNITAGNTEQIQAVI-DANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQR-PDII---RYLVSQG---CIKPLCDLL  437 (530)
T ss_dssp             HHHTTSCHHHHHHHH-HTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTC-THHH---HHHHHTT---CHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHH-HCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCc-HHHH---HHHHHCC---CHHHHHHHH
Confidence            776642 22233333 2345666766666666677777777776665442210 0111   1111122   345678888


Q ss_pred             ccCCCCchHHHHHHHHHHHHHhcCCCC
Q psy8357         228 TDRDSTDTELLIYAMSLLNKTLNGIPD  254 (276)
Q Consensus       228 ~~~d~~D~E~~v~amTLiNktL~~~pd  254 (276)
                      .   +.|.+++..++..+...+...|.
T Consensus       438 ~---~~~~~v~~~al~aL~~l~~~~~~  461 (530)
T 1wa5_B          438 E---IADNRIIEVTLDALENILKMGEA  461 (530)
T ss_dssp             T---TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             h---CCCHHHHHHHHHHHHHHHHhhhh
Confidence            6   46899999999999888876654

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A

Probab=90.45  E-value=2.7  Score=36.94  Aligned_cols=204  Identities=13%  Similarity=0.065  Sum_probs=117.0

Q ss_pred             cCchhhhHHHHhhcCc-chhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHH
Q psy8357          12 DHPPTVQWLYVLVASK-FRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYA   90 (276)
Q Consensus        12 ~h~~tiqwLy~L~~S~-~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~Ellvya   90 (276)
                      +.+..+..|..+..++ ..-|-..|+..|--+......+...+++        .|  -...++++|.   ++|.++...|
T Consensus        61 ~~~~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~--------~~--~i~~L~~lL~---~~~~~vr~~a  127 (450)
T 2jdq_A           61 STPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQ--------AG--AVPIFIELLS---SEFEDVQEQA  127 (450)
T ss_dssp             TSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHH--------TT--HHHHHHHHTT---CSCHHHHHHH
T ss_pred             HcCCcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHh--------CC--CHHHHHHHHc---CCCHHHHHHH
Confidence            3335666777666666 5566666666665554433333322211        12  2346777885   4688999988


Q ss_pred             HHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecc-cchhhccChhHHH
Q psy8357          91 MSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVD-GMTGIMDHPPTVQ  169 (276)
Q Consensus        91 mTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvd-GM~gvi~h~~tvq  169 (276)
                      ...+..-...-|   .+.+.  .++..+++.+++.+.+      ....+.+..++.+++++.-..+ .....+ -...+.
T Consensus       128 ~~~L~~l~~~~~---~~~~~--~~~~~~i~~L~~~l~~------~~~~~v~~~a~~~L~~l~~~~~~~~~~~~-~~~~l~  195 (450)
T 2jdq_A          128 VWALGNIAGDST---MCRDY--VLDCNILPPLLQLFSK------QNRLTMTRNAVWALSNLCRGKSPPPEFAK-VSPCLN  195 (450)
T ss_dssp             HHHHHHHHTTCH---HHHHH--HHHTTCHHHHHHHTTS------CCCHHHHHHHHHHHHHHHCCSSSCCCGGG-TGGGHH
T ss_pred             HHHHHHHccCCH---HHHHH--HHHCCCHHHHHHHhcC------CCCHHHHHHHHHHHHHHhCCCCCCCCHHH-HHHHHH
Confidence            876655443222   22222  3455677777777521      1223445556666766654431 111111 256788


Q ss_pred             HHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHHh
Q psy8357         170 WLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTL  249 (276)
Q Consensus       170 wLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiNktL  249 (276)
                      .|-.+..+....|...|...|--+++....+...+       ...   .-...++++|.   +.|.+++..|...+....
T Consensus       196 ~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~-------~~~---~~i~~L~~ll~---~~~~~v~~~a~~~L~~l~  262 (450)
T 2jdq_A          196 VLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAV-------IDA---GVCRRLVELLM---HNDYKVVSPALRAVGNIV  262 (450)
T ss_dssp             HHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHH-------HHT---TTHHHHHHHTT---CSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHccCCHHHHHHHHHHHHHHHCCCcHHHHHH-------HHc---CcHHHHHHHHC---CCchhHHHHHHHHHHHHh
Confidence            88888888777788888887776665443222111       111   23457888886   568899999888777666


Q ss_pred             cCCC
Q psy8357         250 NGIP  253 (276)
Q Consensus       250 ~~~p  253 (276)
                      .+.|
T Consensus       263 ~~~~  266 (450)
T 2jdq_A          263 TGDD  266 (450)
T ss_dssp             TSCH
T ss_pred             hCCh
Confidence            5543

>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}

Probab=90.36  E-value=3  Score=33.41  Aligned_cols=178  Identities=16%  Similarity=0.137  Sum_probs=90.5

Q ss_pred             cccCchhhhHHHHhhcCcchhHHHHHhhHhheeee----------eccchhHHHHHHHHHhhccCCCCCchHHHHhhccC
Q psy8357          10 IMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVE----------YVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDR   79 (276)
Q Consensus        10 vi~h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfve----------y~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~   79 (276)
                      ...+++.+..|-.+..++...|-..|++.|--+-+          ..+++...-..|+.+...-....-...+++.|.  
T Consensus        14 ~~~~~~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~--   91 (211)
T 3ltm_A           14 LRADPEKVEMYIKNLQDDSYYVRRAAAYALGKIGDERAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALK--   91 (211)
T ss_dssp             --CCGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSCHHHHHHHHHHHHHHCCGGGHHHHHHHTT--
T ss_pred             hhcCHhHHHHHHHHHcCCCHHHHHHHHHHHHHhCCccHHHHHHHHHcCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHc--
Confidence            45788899999999988888887777776654422          112233333444444444333334445555553  


Q ss_pred             CCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccch
Q psy8357          80 DSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMT  159 (276)
Q Consensus        80 ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~  159 (276)
                       ++|.++...|...+.+.    .+.            ..++.+++.+       ..++...+..+.+|++++        
T Consensus        92 -~~~~~vr~~a~~aL~~~----~~~------------~~~~~L~~~l-------~d~~~~vr~~a~~aL~~~--------  139 (211)
T 3ltm_A           92 -DEDGWVRQSAAVALGQI----GDE------------RAVEPLIKAL-------KDEDWFVRIAAAFALGEI--------  139 (211)
T ss_dssp             -CSSHHHHHHHHHHHHHH----CCG------------GGHHHHHHHT-------TCSSHHHHHHHHHHHHHH--------
T ss_pred             -CCCHHHHHHHHHHHHHh----CcH------------HHHHHHHHHH-------hCCCHHHHHHHHHHHHHc--------
Confidence             35566666655544332    221            1223333332       122223334445555443        


Q ss_pred             hhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHH
Q psy8357         160 GIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLI  239 (276)
Q Consensus       160 gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v  239 (276)
                         .+++.+..|-.+..++...|-..|.+.|--+                     ....--..+.++|+   ..|.++.-
T Consensus       140 ---~~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~---------------------~~~~~~~~L~~~l~---d~~~~vr~  192 (211)
T 3ltm_A          140 ---GDERAVEPLIKALKDEDGWVRQSAADALGEI---------------------GGERVRAAMEKLAE---TGTGFARK  192 (211)
T ss_dssp             ---CCGGGHHHHHHHTTCSSHHHHHHHHHHHHHH---------------------CSHHHHHHHHHHHH---HCCHHHHH
T ss_pred             ---CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHh---------------------CchhHHHHHHHHHh---CCCHHHHH
Confidence               3456666666666665555555554444332                     11112234566665   34667777


Q ss_pred             HHHHHHHHH
Q psy8357         240 YAMSLLNKT  248 (276)
Q Consensus       240 ~amTLiNkt  248 (276)
                      .|...+.+.
T Consensus       193 ~A~~aL~~~  201 (211)
T 3ltm_A          193 VAVNYLETH  201 (211)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHHhc
Confidence            776655444

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}

Probab=87.26  E-value=3.6  Score=39.44  Aligned_cols=143  Identities=15%  Similarity=0.151  Sum_probs=87.8

Q ss_pred             CchhhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHHH
Q psy8357          13 HPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMS   92 (276)
Q Consensus        13 h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~EllvyamT   92 (276)
                      ....|.-|-.+..++..-|...|++.|.-+.+..+ |...++.       ..|  --..+++.|.  ++.|.++...|..
T Consensus        12 ~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~-~~~~i~~-------~~~--~i~~Lv~~L~--~~~~~~~~~~A~~   79 (644)
T 2z6h_A           12 ATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA-SRHAIMR-------SPQ--MVSAIVRTMQ--NTNDVETARCTAG   79 (644)
T ss_dssp             CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTSTT-HHHHHTT-------CHH--HHHHHHHHHH--SCCCHHHHHHHHH
T ss_pred             hhchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCCh-hHHHHHh-------ccC--hHHHHHHHHh--cCCCHHHHHHHHH
Confidence            34567888888888888888889998888865543 3221111       111  1245788885  3458899988887


Q ss_pred             HHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHH
Q psy8357          93 LLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLY  172 (276)
Q Consensus        93 LiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLY  172 (276)
                      .+- .|+.-+   .....  -.+..+++.+++.+       ..+....+.+++.+++++....+.-...+.....|..|-
T Consensus        80 ~L~-~Ls~~~---~~~~~--i~~~g~i~~Lv~lL-------~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv  146 (644)
T 2z6h_A           80 TLH-NLSHHR---EGLLA--IFKSGGIPALVKML-------GSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMV  146 (644)
T ss_dssp             HHH-HHTTSH---HHHHH--HHTTTHHHHHHHHT-------TCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHH
T ss_pred             HHH-HHhcCh---hhHHH--HHHcCCHHHHHHHH-------hCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHH
Confidence            665 344322   22221  23446777777764       334456677888888888766554444454556677777


Q ss_pred             HhhcCCch
Q psy8357         173 VLVASKFR  180 (276)
Q Consensus       173 sL~~S~~r  180 (276)
                      .+..++..
T Consensus       147 ~lL~~~~~  154 (644)
T 2z6h_A          147 ALLNKTNV  154 (644)
T ss_dssp             HGGGCCCH
T ss_pred             HHHCcCCH
Confidence            77666543

>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B

Probab=85.93  E-value=3  Score=39.16  Aligned_cols=202  Identities=17%  Similarity=0.118  Sum_probs=107.6

Q ss_pred             hhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCC--chHHHH-HHHH
Q psy8357          16 TVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDST--DTELLI-YAMS   92 (276)
Q Consensus        16 tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~--D~Ellv-yamT   92 (276)
                      .|.-|..|..|+..-|...|+..|--....++.+...+++        .|  -...++++|...+..  ..+++- .+.+
T Consensus       163 aip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~--------~g--~i~~Ll~lL~~~~~~~~~~~~~~~a~~~  232 (529)
T 3tpo_A          163 AIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIK--------HG--AIDPLLALLAVPDLSTLACGYLRNLTWT  232 (529)
T ss_dssp             HHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHH--------TT--CHHHHHHTTCSSCGGGSCHHHHHHHHHH
T ss_pred             CHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHH--------cC--CcHHHHHHHhccchhHhHHHHHHHHHHH
Confidence            3445555555555555555555544333222222222221        12  245678888643322  223333 3334


Q ss_pred             HHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHH
Q psy8357          93 LLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLY  172 (276)
Q Consensus        93 LiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLY  172 (276)
                      |-|-.-+.-|-. .+-     ....++..+++.+       ..+..+.+..+..|++.+.-..+.....+.....+..|-
T Consensus       233 L~nl~~~~~~~~-~~~-----~~~~~lp~L~~LL-------~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv  299 (529)
T 3tpo_A          233 LSNLCRNKNPAP-PLD-----AVEQILPTLVRLL-------HHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLV  299 (529)
T ss_dssp             HHHHHCCCTTCC-CHH-----HHHHHHHHHHHHT-------TSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHH
T ss_pred             HHHHHhcccchh-hHH-----HHhhHHHHHHHHh-------cCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHH
Confidence            444333332322 221     1234455555543       233334455566777776665555555566677888899


Q ss_pred             HhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHHhcCC
Q psy8357         173 VLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGI  252 (276)
Q Consensus       173 sL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiNktL~~~  252 (276)
                      .|..++...|...|+..|--++..++.+...++.       ..+   ...++++|.   +++.+++-.|.-.+-...++-
T Consensus       300 ~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~-------~g~---l~~L~~LL~---~~~~~i~~~a~~aL~nl~~~~  366 (529)
T 3tpo_A          300 KLLGATELPIVTPALRAIGNIVTGTDEQTQKVID-------AGA---LAVFPSLLT---NPKTNIQKEATWTMSNITAGR  366 (529)
T ss_dssp             HHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH-------TTG---GGGHHHHTT---CSSHHHHHHHHHHHHHHHTSC
T ss_pred             HHhcCCChhHHHHHHHHHHHHHccchHHHHHHhh-------ccc---HHHHHHHHc---CCCHHHHHHHHHHHHHHhccc
Confidence            9999988888888888876555444433333322       222   345788886   678888887766554444443


Q ss_pred             C
Q psy8357         253 P  253 (276)
Q Consensus       253 p  253 (276)
                      |
T Consensus       367 ~  367 (529)
T 3tpo_A          367 Q  367 (529)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}

Probab=85.81  E-value=6.4  Score=31.19  Aligned_cols=85  Identities=14%  Similarity=0.089  Sum_probs=50.0

Q ss_pred             ccccCchhhhHHHHhhcCcchhHHHHHhhHhheeee----------eccchhHHHHHHHHHhhccCCCCCchHHHHhhcc
Q psy8357           9 GIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVE----------YVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTD   78 (276)
Q Consensus         9 gvi~h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfve----------y~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~   78 (276)
                      +-..++....-+..+..++...|-..|+..|--+-+          ..++|...-..|+.+...-........+++.|. 
T Consensus         8 ~~~~~~~~~~~~i~~L~~~~~~vr~~A~~~L~~~~~~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~~~~~~~L~~~l~-   86 (201)
T 3ltj_A            8 HHHTDPEKVEMYIKNLQDDSYYVRRAAAYALGKIGDERAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALK-   86 (201)
T ss_dssp             CCCCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTT-
T ss_pred             ccccCCcchHHHHHHhcCCCHHHHHHHHHHHHhcCChhHHHHHHHHHcCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHc-
Confidence            344455566666666666666666655555443321          123455555566666665444445667777774 


Q ss_pred             CCCCchHHHHHHHHHHHH
Q psy8357          79 RDSTDTELLIYAMSLLNK   96 (276)
Q Consensus        79 ~ds~D~EllvyamTLiNk   96 (276)
                        ..|.++...|...+-+
T Consensus        87 --d~~~~vr~~a~~aL~~  102 (201)
T 3ltj_A           87 --DEDGWVRQSAAVALGQ  102 (201)
T ss_dssp             --CSSHHHHHHHHHHHHH
T ss_pred             --CCCHHHHHHHHHHHHH
Confidence              3678888887775554

>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}

Probab=85.19  E-value=2.3  Score=39.16  Aligned_cols=140  Identities=16%  Similarity=0.222  Sum_probs=97.2

Q ss_pred             HHHHhhccCCCCchHHHHHHHHHHHHhhCCCC-CCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhc
Q psy8357          71 NIMRLLTDRDSTDTELLIYAMSLLNKTLNGIP-DQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALG  149 (276)
Q Consensus        71 ~lm~lL~~~ds~D~EllvyamTLiNktL~~lp-DqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~  149 (276)
                      -+++++.   +.|.=+-++|+-.+|.-|.+.| +..+|-.+.+.|..     ++          ++..+-.+.|+.-.++
T Consensus        79 ~iI~llk---~~dEkval~A~r~L~~LLe~vpL~~~~y~Kl~~aL~d-----li----------k~~~~il~~eaae~Lg  140 (265)
T 3b2a_A           79 VFINALS---QENEKVTIKALRALGYLVKDVPMGSKTFLKAAKTLVS-----LL----------ESPDDMMRIETIDVLS  140 (265)
T ss_dssp             HHHHTCC---STTHHHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHH-----HT----------TSCCHHHHHHHHHHHH
T ss_pred             HHHHHHh---ccchhHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-----Hh----------cCCCchHHHHHHHHhC
Confidence            4666674   5789999999999999999999 56777766555432     22          2233334455555555


Q ss_pred             chhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhcc
Q psy8357         150 QVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTD  229 (276)
Q Consensus       150 q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~  229 (276)
                      .+       .-..-.+..+.||++|+.|+.|-|=-.||.+|+=.-.|++             |.+--..-++.+-++|. 
T Consensus       141 kl-------kv~~~~~~V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~-------------D~~i~~~I~~eI~elL~-  199 (265)
T 3b2a_A          141 KL-------QPLEDSKLVRTYINELVVSPDLYTKVAGFCLFLNMLNSSA-------------DSGHLTLILDEIPSLLQ-  199 (265)
T ss_dssp             HC-------CBSCCCHHHHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCS-------------SCCCGGGTTTTHHHHHT-
T ss_pred             cC-------CcccchHHHHHHHHHHHhCCChhHHHHHHHHHHHhhcccC-------------CHHHHHHHHHHHHHHHc-
Confidence            44       4445588999999999999988886666666554433332             12223456778888996 


Q ss_pred             CCCCchHHHHHHHHHHHHHhcC
Q psy8357         230 RDSTDTELLIYAMSLLNKTLNG  251 (276)
Q Consensus       230 ~d~~D~E~~v~amTLiNktL~~  251 (276)
                        +-|.++.=.|+..+-..++-
T Consensus       200 --~eD~~l~e~aLd~Le~ils~  219 (265)
T 3b2a_A          200 --NDNEFIVELALDVLEKALSF  219 (265)
T ss_dssp             --CSCHHHHHHHHHHHHHHTTS
T ss_pred             --CCCHHHHHHHHHHHHHHHcC
Confidence              56899999999988888765

>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}

Probab=84.30  E-value=11  Score=29.83  Aligned_cols=48  Identities=15%  Similarity=0.156  Sum_probs=33.9

Q ss_pred             ccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHHHHHHH
Q psy8357          46 VESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNK   96 (276)
Q Consensus        46 ~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~EllvyamTLiNk   96 (276)
                      .+.|...-..|+.+...-........+++.|.   .+|.++...|...+-+
T Consensus        24 ~~~~~~vr~~A~~~L~~~~~~~~~~~L~~~l~---~~~~~vr~~a~~~L~~   71 (201)
T 3ltj_A           24 QDDSYYVRRAAAYALGKIGDERAVEPLIKALK---DEDAWVRRAAADALGQ   71 (201)
T ss_dssp             TCSCHHHHHHHHHHHHHHCCGGGHHHHHHHTT---CSSHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHhcCChhHHHHHHHHHc---CCCHHHHHHHHHHHHh
Confidence            44567777788888877665566778888884   4678888887765544

>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}

Probab=84.27  E-value=7.1  Score=31.15  Aligned_cols=150  Identities=15%  Similarity=0.128  Sum_probs=92.1

Q ss_pred             ccCchhhhHHHHhhcCcchhHHHHHhhHhheeee----------eccchhHHHHHHHHHhhccCCCCCchHHHHhhccCC
Q psy8357          11 MDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVE----------YVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRD   80 (276)
Q Consensus        11 i~h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfve----------y~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~d   80 (276)
                      +.+++.+..|..+..++...|-..|++.|--+-+          ..++|..+-..|+.+...-....-...+++.|.   
T Consensus        46 ~~~~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~---  122 (211)
T 3ltm_A           46 IGDERAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALK---  122 (211)
T ss_dssp             HCCGGGHHHHHHHTTCSCHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTT---
T ss_pred             hCCccHHHHHHHHHcCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHh---
Confidence            3456788888888888877777777666654421          123445555666777665544445677888884   


Q ss_pred             CCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchh
Q psy8357          81 STDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTG  160 (276)
Q Consensus        81 s~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~g  160 (276)
                      .+|.++...|...+-+.    .+.            ..+..+++.+       ..++...+..+.+|++++         
T Consensus       123 d~~~~vr~~a~~aL~~~----~~~------------~~~~~L~~~l-------~d~~~~vr~~a~~aL~~~---------  170 (211)
T 3ltm_A          123 DEDWFVRIAAAFALGEI----GDE------------RAVEPLIKAL-------KDEDGWVRQSAADALGEI---------  170 (211)
T ss_dssp             CSSHHHHHHHHHHHHHH----CCG------------GGHHHHHHHT-------TCSSHHHHHHHHHHHHHH---------
T ss_pred             CCCHHHHHHHHHHHHHc----CCH------------HHHHHHHHHH-------cCCCHHHHHHHHHHHHHh---------
Confidence            47788888877655443    332            2333444443       222223444556666665         


Q ss_pred             hccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeec
Q psy8357         161 IMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYV  197 (276)
Q Consensus       161 vi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~  197 (276)
                        .+++.+..|-.+..++...|-+.|.+.|--+....
T Consensus       171 --~~~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~~~~  205 (211)
T 3ltm_A          171 --GGERVRAAMEKLAETGTGFARKVAVNYLETHKSFN  205 (211)
T ss_dssp             --CSHHHHHHHHHHHHHCCHHHHHHHHHHHHC-----
T ss_pred             --CchhHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCC
Confidence              46889999998888877888888888776664443

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A

Probab=81.56  E-value=16  Score=32.91  Aligned_cols=144  Identities=15%  Similarity=0.149  Sum_probs=88.3

Q ss_pred             chhhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHHHH
Q psy8357          14 PPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSL   93 (276)
Q Consensus        14 ~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~EllvyamTL   93 (276)
                      ...+.-|-.+..++..-|...|++.|.-+.+..+ |...++.       ..|  -...++++|..  +.|.++...|...
T Consensus        16 ~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~-~~~~~~~-------~~~--~i~~Lv~~L~~--~~~~~~~~~a~~~   83 (529)
T 1jdh_A           16 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA-SRHAIMR-------SPQ--MVSAIVRTMQN--TNDVETARCTAGT   83 (529)
T ss_dssp             -CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHH-HHHHHHT-------CHH--HHHHHHHHHHH--CCCHHHHHHHHHH
T ss_pred             HhhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCc-cHHHHHh-------Ccc--hHHHHHHHHhc--CCCHHHHHHHHHH
Confidence            3457778888888888888888888877764432 3222221       111  12468888853  4588888888776


Q ss_pred             HHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHHH
Q psy8357          94 LNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYV  173 (276)
Q Consensus        94 iNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLYs  173 (276)
                      +-+ |+.-   +...+.  -.+..|++.+++.+       ..+..+.+.+++++++++....+.-...+.....+.-|-.
T Consensus        84 L~~-ls~~---~~~~~~--i~~~g~i~~L~~lL-------~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~  150 (529)
T 1jdh_A           84 LHN-LSHH---REGLLA--IFKSGGIPALVKML-------GSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVA  150 (529)
T ss_dssp             HHH-HTTS---HHHHHH--HHHTTHHHHHHHHT-------TCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHH
T ss_pred             HHH-HHcC---chhHHH--HHHcCCHHHHHHHH-------cCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHH
Confidence            655 3322   222222  23457788887775       3344456778888888887765554445555666777777


Q ss_pred             hhcCCchhH
Q psy8357         174 LVASKFRLV  182 (276)
Q Consensus       174 L~~S~~rlV  182 (276)
                      +..++...+
T Consensus       151 ll~~~~~~~  159 (529)
T 1jdh_A          151 LLNKTNVKF  159 (529)
T ss_dssp             GGGCCCHHH
T ss_pred             HHhcCCHHH
Confidence            776654333

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*

Probab=81.09  E-value=3.6  Score=36.89  Aligned_cols=181  Identities=15%  Similarity=0.155  Sum_probs=109.8

Q ss_pred             HHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHH-hhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHH
Q psy8357          34 TALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMR-LLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVD  112 (276)
Q Consensus        34 taLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~-lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d  112 (276)
                      .||+.|.-++|--+ |+.-+++       ..|   +..+++ +|.   +++.++...|...|-....+   .+...+.  
T Consensus        59 ~Al~~L~~lv~~~d-na~~~~~-------~G~---l~~Lv~~lL~---s~~~~vr~~Aa~~Lg~ia~~---n~~~~~~--  119 (296)
T 1xqr_A           59 GALELLADLCENMD-NAADFCQ-------LSG---MHLLVGRYLE---AGAAGLRWRAAQLIGTCSQN---VAAIQEQ--  119 (296)
T ss_dssp             HHHHHHHHHHTSHH-HHHHHHH-------TTH---HHHHHHTTTT---CSSHHHHHHHHHHHHHHHTT---CHHHHHH--
T ss_pred             HHHHHHHHHHhChh-hHHHHHH-------cCC---HHHHHHHHHc---CCCHHHHHHHHHHHHHHHhC---CHHHHHH--
Confidence            46666666666333 5554432       223   346788 884   78999999988766443322   2334443  


Q ss_pred             HHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchh-hecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhhe
Q psy8357         113 ALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVM-LYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLL  191 (276)
Q Consensus       113 ~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~m-lYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLl  191 (276)
                      -++..|+..+++.+..      .+....+.-++.|++++. -+..+.+.++.++ .+.-|-.+..|+...|-+.|.-+|-
T Consensus       120 vv~~g~l~~Ll~LL~~------~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~g-gi~~L~~lL~~~d~~v~~~A~~aLs  192 (296)
T 1xqr_A          120 VLGLGALRKLLRLLDR------DACDTVRVKALFAISCLVREQEAGLLQFLRLD-GFSVLMRAMQQQVQKLKVKSAFLLQ  192 (296)
T ss_dssp             HHHTTHHHHHHHHHHH------CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTT-HHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred             HHHCCCHHHHHHHHcc------CCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCC-CHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            4567888888887622      112233445666777665 3566666666654 5777777777777777777766664


Q ss_pred             eeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHHhcCCC
Q psy8357         192 IFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIP  253 (276)
Q Consensus       192 Vfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiNktL~~~p  253 (276)
                      =++.-+..+...++       . .|..  ..++++|.   +.|.+++-.|...+-..+.+.|
T Consensus       193 ~L~~~~~~~~~~vv-------~-~g~i--~~Lv~LL~---~~d~~v~~~al~aL~~l~~~~~  241 (296)
T 1xqr_A          193 NLLVGHPEHKGTLC-------S-MGMV--QQLVALVR---TEHSPFHEHVLGALCSLVTDFP  241 (296)
T ss_dssp             HHHHHCGGGHHHHH-------H-TTHH--HHHHHHHT---SCCSTHHHHHHHHHHHHHTTCH
T ss_pred             HHHhCChHHHHHHH-------H-cCCH--HHHHHHHc---CCChhHHHHHHHHHHHHHhCCh
Confidence            44333222222222       2 2322  46888896   6789999999988877776644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	276
d2bnxa1	343	Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {	99.45
d2bnxa1	343	Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {	98.8
d1q1sc_	434	Importin alpha {Mouse (Mus musculus) [TaxId: 10090	96.27
d1wa5b_	503	Karyopherin alpha {Baker's yeast (Saccharomyces ce	93.12
d1q1sc_	434	Importin alpha {Mouse (Mus musculus) [TaxId: 10090	92.47
d1wa5b_	503	Karyopherin alpha {Baker's yeast (Saccharomyces ce	90.99
d1xqra1	264	Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi	89.17
d1jdha_	529	beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}	88.26
d1xm9a1	457	Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}	82.19
d1xqra1	264	Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi	80.68

>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Diap1 N-terninal region-like
domain: Diaphanous protein homolog 1, Diap1 (Dia1, DRF1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=2.4e-13  Score=123.90  Aligned_cols=196  Identities=15%  Similarity=0.158  Sum_probs=156.2

Q ss_pred             HHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhh---hcCCcc-ccCCCCCCchhhh
Q psy8357          71 NIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLD---QHGIKY-TTSSTDLPTEPLV  146 (276)
Q Consensus        71 ~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~---~~~~~~-~~~~tn~q~YiLr  146 (276)
                      ..++.|.+  +...|.++-.+.=+...|..-|-     +-++..+.+|++.++.-+.   +++.+- +......+.++++
T Consensus         6 ~yv~~l~~--~~~~~~~~~~L~sL~v~Lrt~~~-----sWv~~F~~~G~~~L~~~L~~l~~~~~~~~~~~d~~~e~e~l~   78 (343)
T d2bnxa1           6 MYIQELRS--GLRDMHLLSCLESLRVSLNNNPV-----SWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIR   78 (343)
T ss_dssp             HHHHHHTS--CCCHHHHHHHHHHHHHHHHHSCH-----HHHHHHHHHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHH
T ss_pred             HHHHHHHh--cCCccHHHHHHHHHHHHHhcCCc-----hHHHHHHhccHHHHHHHHHHHHhhcccccccccHHHHHHHHH
Confidence            34555543  45556666666667777877763     2233346789988776543   222110 0011224668999


Q ss_pred             hhcchhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeecc--CchHHHHHHHHHhhhcCCCCCchHHH
Q psy8357         147 ALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVE--SNCFLLIQAVHAVDNSNGEPPWSNIM  224 (276)
Q Consensus       147 Al~q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e--~n~~l~~~Av~~v~~~~~~~pwsnlm  224 (276)
                      .++++|=+..|++.|++||+.+.+|+...+|+...+-|.|+++|...|=|.+  +++..+.+|+.......+..+|+.+|
T Consensus        79 CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~tr~~a~elL~~lc~~~~~~~g~~~vL~Al~~~~~~~e~~RF~~lv  158 (343)
T d2bnxa1          79 CLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLL  158 (343)
T ss_dssp             HHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHH
T ss_pred             HHHHHhccHHHHHHHHcChHHHHHHHHccCCCchHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHhcCCCcHHHHH
Confidence            9999999999999999999999999999999999999999999977776654  56889999999888888999999999


Q ss_pred             HhhccCCCCchHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhhHHHHHh
Q psy8357         225 RLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIR  275 (276)
Q Consensus       225 ~lL~~~d~~D~E~~v~amTLiNktL~~~pdqds~yd~~d~le~~Gme~i~~  275 (276)
                      +-|.  ++++.|.++.+|+|||..+++.||-+..-.+-..|...|+.++++
T Consensus       159 ~~l~--~~~~~ey~~a~m~lIN~li~~~~dl~~R~~lR~E~~~~Gl~~il~  207 (343)
T d2bnxa1         159 DGLK--SGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQ  207 (343)
T ss_dssp             HHTS--TTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHHHH
T ss_pred             HHHh--ccccHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHCChHHHHH
Confidence            9996  566899999999999999999999999999999999999999986

>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Diap1 N-terninal region-like
domain: Diaphanous protein homolog 1, Diap1 (Dia1, DRF1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=6.2e-09  Score=94.33  Aligned_cols=143  Identities=13%  Similarity=0.139  Sum_probs=120.0

Q ss_pred             eeccccccccCchhhhHHHHhhcCcchhHHHHHhhHhheeeeecc--chhHHHHHHHHHhhccCCCCCchHHHHhhccCC
Q psy8357           3 YVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVE--SNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRD   80 (276)
Q Consensus         3 yVDGM~gvi~h~~tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e--~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~d   80 (276)
                      .-.|++.|++|++.+.+|+....|+...+.|.|+++|...|=|.+  ..+..+++|+.......+..+|+++|+-|.  +
T Consensus        86 ~~~G~~~vl~~~~~i~~l~~~L~s~~~~tr~~a~elL~~lc~~~~~~~g~~~vL~Al~~~~~~~e~~RF~~lv~~l~--~  163 (343)
T d2bnxa1          86 NKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLK--S  163 (343)
T ss_dssp             SHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTS--T
T ss_pred             cHHHHHHHHcChHHHHHHHHccCCCchHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHhcCCCcHHHHHHHHh--c
Confidence            346999999999999999999999999999999999966665654  459999999998888888999999999995  5


Q ss_pred             CCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchh
Q psy8357          81 STDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTG  160 (276)
Q Consensus        81 s~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~g  160 (276)
                      +++.|..+-+|++||--+++.||-+.=-.+...+...|++++++.+.+.           +.-.|.  .|+-.|.+-.+.
T Consensus       164 ~~~~ey~~a~m~lIN~li~~~~dl~~R~~lR~E~~~~Gl~~il~~l~~~-----------~~~~L~--~Qi~~f~~~~~~  230 (343)
T d2bnxa1         164 GTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREI-----------ENEDMK--VQLCVFDEQGDE  230 (343)
T ss_dssp             TSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHHHHHHTTC-----------CCHHHH--HHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHCChHHHHHHHHcc-----------CChHHH--HHHHHHHHHHHh
Confidence            6789999999999999999999977666788889999999999997332           222344  788888764443

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.27  E-value=0.004  Score=52.18  Aligned_cols=172  Identities=14%  Similarity=0.190  Sum_probs=103.4

Q ss_pred             CchHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhh
Q psy8357          68 PWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVA  147 (276)
Q Consensus        68 pws~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrA  147 (276)
                      -+..+++++.   +++.++...|+..+.....+   .+.+.  ...++..+++.+++-+       .....+.+.++..+
T Consensus       231 ~~~~Lv~ll~---~~~~~~~~~al~~l~~l~~~---~~~~~--~~~~~~~~~~~l~~ll-------~~~~~~v~~~a~~~  295 (434)
T d1q1sc_         231 VVPQLVKLLG---ATELPIVTPALRAIGNIVTG---TDEQT--QKVIDAGALAVFPSLL-------TNPKTNIQKEATWT  295 (434)
T ss_dssp             CHHHHHHHHT---CSCHHHHHHHHHHHHHHTTS---CHHHH--HHHHHTTGGGGHHHHT-------TCSSHHHHHHHHHH
T ss_pred             cchhcccccc---cchhhhhhchhhhhhhHHhh---hhHHH--HHHHhccccchHHHhh-------cccchhhhHHHHHH
Confidence            3566888884   57899999988877654432   12221  1234566666655553       34445567788888


Q ss_pred             hcchhhecc-cchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHh
Q psy8357         148 LGQVMLYVD-GMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRL  226 (276)
Q Consensus       148 l~q~mlYvd-GM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~l  226 (276)
                      +.++..... ....+.++ ..++-+..+..+....+.+.|...+--++.+.....      +.......   --..++++
T Consensus       296 L~~l~~~~~~~~~~i~~~-~~i~~li~~l~~~~~~v~~~a~~~l~nl~~~~~~~~------~~~l~~~~---~i~~L~~l  365 (434)
T d1q1sc_         296 MSNITAGRQDQIQQVVNH-GLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQ------IVYLVHCG---IIEPLMNL  365 (434)
T ss_dssp             HHHHTTSCHHHHHHHHHT-TCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHH------HHHHHHTT---CHHHHHHH
T ss_pred             HhhhccccchhHHHHhhh-hhHHHHHHHHhccChHHHHHHHHHHHHHHhcCCHHH------HHHHHHCC---cHHHHHHH
Confidence            888876443 34444554 366777777777777788888877766655543111      11111222   34558888


Q ss_pred             hccCCCCchHHHHHHHHHHHHHhc---CCCCCchhhHHHHHHHHhhH
Q psy8357         227 LTDRDSTDTELLIYAMSLLNKTLN---GIPDQDSYYDQVDALEEQGI  270 (276)
Q Consensus       227 L~~~d~~D~E~~v~amTLiNktL~---~~pdqds~yd~~d~le~~Gm  270 (276)
                      |+   +.|.++...+.-.|...+.   ..++.+.|.   ..+++.|.
T Consensus       366 l~---~~d~~~~~~~l~~l~~ll~~~~~~~~~~~~~---~~~~~~~~  406 (434)
T d1q1sc_         366 LS---AKDTKIIQVILDAISNIFQAAEKLGETEKLS---IMIEECGG  406 (434)
T ss_dssp             TT---SSCHHHHHHHHHHHHHHHHHHHTTTCHHHHH---HHHHHTTS
T ss_pred             hc---CCCHHHHHHHHHHHHHHHHHHHhcCCcHHHH---HHHHHcCC
Confidence            95   6789999888877766654   344444443   34555443

>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Karyopherin alpha
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.12  E-value=0.32  Score=41.80  Aligned_cols=157  Identities=20%  Similarity=0.170  Sum_probs=96.1

Q ss_pred             HHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHH-HHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcc
Q psy8357          72 IMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVD-ALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQ  150 (276)
Q Consensus        72 lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d-~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q  150 (276)
                      +.+++   .+.|.|....+...+-.-..+-+      +... -++...++.++..+       ..+....+..++++++.
T Consensus       251 l~~~l---~~~d~~~~~~~~~~l~~l~~~~~------~~~~~~~~~~~~~~l~~ll-------~~~~~~v~~~al~~l~n  314 (503)
T d1wa5b_         251 LAKLI---YSMDTETLVDACWAISYLSDGPQ------EAIQAVIDVRIPKRLVELL-------SHESTLVQTPALRAVGN  314 (503)
T ss_dssp             HHHHT---TCCCHHHHHHHHHHHHHHHSSCH------HHHHHHHHTTCHHHHHHGG-------GCSCHHHHHHHHHHHHH
T ss_pred             HHHHh---ccccHHHHHHHHHHHHhhccCCc------hhhhhhhhhhhhhhhhhcc-------cCCchhhhhhHHHHHHH
Confidence            44556   36789999888776655443211      2222 24455566666654       33444556678999999


Q ss_pred             hhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccC
Q psy8357         151 VMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDR  230 (276)
Q Consensus       151 ~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~  230 (276)
                      +....+.....+-....++.|..+..|+-..+.|.|+..+--++..++.    .+.++   -. .+  -...++++|.  
T Consensus       315 l~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~~~~~~----~~~~i---~~-~~--~l~~li~~l~--  382 (503)
T d1wa5b_         315 IVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTE----QIQAV---ID-AN--LIPPLVKLLE--  382 (503)
T ss_dssp             HTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH----HHHHH---HH-TT--CHHHHHHHHH--
T ss_pred             HHHHHHHHHHhhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHhhccHH----HHHHH---HH-cc--ccchhHHhcc--
Confidence            8877776666666667899999999998888888887776554332221    11111   11 22  2346788885  


Q ss_pred             CCCchHHHHHHHH-HHHHHhcCCCCCch
Q psy8357         231 DSTDTELLIYAMS-LLNKTLNGIPDQDS  257 (276)
Q Consensus       231 d~~D~E~~v~amT-LiNktL~~~pdqds  257 (276)
                       +++.+++-.|.. |.|-+..+..+++.
T Consensus       383 -~~~~~v~~~a~~~l~nl~~~~~~~~~~  409 (503)
T d1wa5b_         383 -VAEYKTKKEACWAISNASSGGLQRPDI  409 (503)
T ss_dssp             -HSCHHHHHHHHHHHHHHHHHTTTCTHH
T ss_pred             -cCChhHHHHHHHHHHHHHhcccccHHH
Confidence             567777766654 44555555544443

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.47  E-value=0.1  Score=43.23  Aligned_cols=102  Identities=15%  Similarity=0.099  Sum_probs=67.4

Q ss_pred             CCCchhhhhhcchhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCC
Q psy8357         139 DLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEP  218 (276)
Q Consensus       139 n~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~  218 (276)
                      +....++.+++.+.-..+.....+..+..++.|..+..++..-+...|+..+--++..++.....+++        .|  
T Consensus       203 ~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~~~~~~~~~~--------~~--  272 (434)
T d1q1sc_         203 EVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVID--------AG--  272 (434)
T ss_dssp             HHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH--------TT--
T ss_pred             chhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhhhchhhhhhhHHhhhhHHHHHHHh--------cc--
Confidence            33445666666665555555555677788999999999988888888888776554333322222221        22  


Q ss_pred             CchHHHHhhccCCCCchHHHHHHHHHHHHHhcCCC
Q psy8357         219 PWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIP  253 (276)
Q Consensus       219 pwsnlm~lL~~~d~~D~E~~v~amTLiNktL~~~p  253 (276)
                      -...++++|+   +.+.|++.+|...+.....+.+
T Consensus       273 ~~~~l~~ll~---~~~~~v~~~a~~~L~~l~~~~~  304 (434)
T d1q1sc_         273 ALAVFPSLLT---NPKTNIQKEATWTMSNITAGRQ  304 (434)
T ss_dssp             GGGGHHHHTT---CSSHHHHHHHHHHHHHHTTSCH
T ss_pred             ccchHHHhhc---ccchhhhHHHHHHHhhhccccc
Confidence            3456888896   6789999999887777665544

>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Karyopherin alpha
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.99  E-value=0.82  Score=39.13  Aligned_cols=155  Identities=14%  Similarity=0.151  Sum_probs=91.6

Q ss_pred             hHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhc
Q psy8357          70 SNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALG  149 (276)
Q Consensus        70 s~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~  149 (276)
                      ..++.+|.   +++.++...|...+.....+   .+   +.++.+.+.|.-..+..+      +...+...+..++.+++
T Consensus       291 ~~l~~ll~---~~~~~v~~~al~~l~nl~~~---~~---~~~~~~~~~~~l~~l~~l------l~~~~~~i~~~~~~~l~  355 (503)
T d1wa5b_         291 KRLVELLS---HESTLVQTPALRAVGNIVTG---ND---LQTQVVINAGVLPALRLL------LSSPKENIKKEACWTIS  355 (503)
T ss_dssp             HHHHHGGG---CSCHHHHHHHHHHHHHHTTS---CH---HHHHHHHHTTHHHHHHHH------TTCSCHHHHHHHHHHHH
T ss_pred             hhhhhccc---CCchhhhhhHHHHHHHHHHH---HH---HHHHhhhccchHHHHHHH------hcCCCHHHHHHHHHHHH
Confidence            45777774   67889998888777655433   12   234455566665556665      33333344445666777


Q ss_pred             chhh-ecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhc
Q psy8357         150 QVML-YVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLT  228 (276)
Q Consensus       150 q~ml-YvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~  228 (276)
                      ++.. -.+....++++ ..++++..+..+....|-+.|...+--++.........+    +.... .  .....++++|.
T Consensus       356 nl~~~~~~~~~~i~~~-~~l~~li~~l~~~~~~v~~~a~~~l~nl~~~~~~~~~~~----~~l~~-~--~~l~~l~~~L~  427 (503)
T d1wa5b_         356 NITAGNTEQIQAVIDA-NLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDII----RYLVS-Q--GCIKPLCDLLE  427 (503)
T ss_dssp             HHTTSCHHHHHHHHHT-TCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHH----HHHHH-T--TCHHHHHHHTT
T ss_pred             HHhhccHHHHHHHHHc-cccchhHHhcccCChhHHHHHHHHHHHHHhcccccHHHH----HHHHH-C--CcHHHHHHHhc
Confidence            7654 33445555543 477888888877777777777665544433322111111    11111 1  24567899995


Q ss_pred             cCCCCchHHHHHHHHHHHHHhc
Q psy8357         229 DRDSTDTELLIYAMSLLNKTLN  250 (276)
Q Consensus       229 ~~d~~D~E~~v~amTLiNktL~  250 (276)
                         +.|.++...++..|...|.
T Consensus       428 ---~~d~~~~~~~L~~l~~ll~  446 (503)
T d1wa5b_         428 ---IADNRIIEVTLDALENILK  446 (503)
T ss_dssp             ---TCCHHHHHHHHHHHHHHHH
T ss_pred             ---CCCHHHHHHHHHHHHHHHH
Confidence               6789988888877766664

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HspBP1 domain
domain: Hsp70-binding protein 1 (HspBP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.17  E-value=0.32  Score=39.17  Aligned_cols=192  Identities=14%  Similarity=0.090  Sum_probs=122.7

Q ss_pred             CcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCc
Q psy8357          26 SKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQD  105 (276)
Q Consensus        26 S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqD  105 (276)
                      +...-+..+||+.|--++|=. .|+.-++.       ..|   +..++..+.  +++|.|+...|...|......-|.  
T Consensus        28 ~~~~~~~~~Al~~L~~L~~~~-d~a~~l~~-------~gg---~~~ll~~ll--~s~~~~vr~~A~~~L~~l~~~~~~--   92 (264)
T d1xqra1          28 AADQQEREGALELLADLCENM-DNAADFCQ-------LSG---MHLLVGRYL--EAGAAGLRWRAAQLIGTCSQNVAA--   92 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSH-HHHHHHHH-------TTH---HHHHHHTTT--TCSSHHHHHHHHHHHHHHHTTCHH--
T ss_pred             CCCHHHHHHHHHHHHHHHcCH-HHHHHHHH-------cCC---HHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHH--
Confidence            344456677888887777533 34433322       122   344554332  478999999999999887754331  


Q ss_pred             hhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHHHhhcCCchhHHHH
Q psy8357         106 SYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKT  185 (276)
Q Consensus       106 s~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKt  185 (276)
                       .  ....++..|+..+++.+.+      ......+..++.|++++.-..+.-.-.+.....++.|-.+..|....+.+.
T Consensus        93 -~--~~~~~~~~~i~~Lv~lL~~------~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~  163 (264)
T d1xqra1          93 -I--QEQVLGLGALRKLLRLLDR------DACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVK  163 (264)
T ss_dssp             -H--HHHHHHTTHHHHHHHHHHH------CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHH
T ss_pred             -H--HHHHHHcCchHHHHHHhhc------CCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHH
Confidence             1  2234567889998887522      122234566778888877655554444445556788888888888888888


Q ss_pred             HHhhheeeEeeccCchHHHHHHHHHhhhcCCCCCchHHHHhhccCCCCchHHHHHHHHHHHHHhcCCCC
Q psy8357         186 ALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPD  254 (276)
Q Consensus       186 aLkLLlVfvey~e~n~~l~~~Av~~v~~~~~~~pwsnlm~lL~~~d~~D~E~~v~amTLiNktL~~~pd  254 (276)
                      |+.+|.-++..++++...+..        .|..  ..++++|+   ++|.+++-.|...+.......|.
T Consensus       164 a~~~L~~l~~~~~~~~~~~~~--------~~~v--~~L~~lL~---~~~~~~~~~a~~aL~~L~~~~~~  219 (264)
T d1xqra1         164 SAFLLQNLLVGHPEHKGTLCS--------MGMV--QQLVALVR---TEHSPFHEHVLGALCSLVTDFPQ  219 (264)
T ss_dssp             HHHHHHHHHHHCGGGHHHHHH--------TTHH--HHHHHHHT---SCCSTHHHHHHHHHHHHHTTCHH
T ss_pred             HHHHHHHHHhccHHHHHHHHH--------hhhH--HHHHHHHc---CCCHHHHHHHHHHHHHHHhcCHH
Confidence            888887776666655544432        1222  36888996   67899999988777766655543

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: beta-Catenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.26  E-value=0.58  Score=40.29  Aligned_cols=154  Identities=15%  Similarity=0.197  Sum_probs=100.5

Q ss_pred             hhhHHHHhhcCcchhHHHHHhhHhheeeeeccchhHHHHHHHHHhhccCCCCCchHHHHhhccCCCCchHHHHHHHHHHH
Q psy8357          16 TVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLN   95 (276)
Q Consensus        16 tiqwLy~L~~S~~rlVvKtaLkLLlVfvey~e~n~~lli~Av~~v~~~~g~~pws~lm~lL~~~ds~D~EllvyamTLiN   95 (276)
                      .|.=|-.|..+...-|.+.|.+.+..+..+...+..+. ..       .|..  ..++++|.  ++.|.|+.-.|...+-
T Consensus        18 aip~L~~lL~~~~~~v~~~A~~~l~~l~~~~~~~~~~~-~~-------~~~v--~~l~~~L~--~~~~~~~~~~a~~~L~   85 (529)
T d1jdha_          18 AIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIM-RS-------PQMV--SAIVRTMQ--NTNDVETARCTAGTLH   85 (529)
T ss_dssp             HHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHH-TC-------HHHH--HHHHHHHH--HCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHhccHHHHHHH-Hh-------hhHH--HHHHHHHc--CCCCHHHHHHHHHHHH
Confidence            36667888889989999999998877754332222221 11       1111  35677885  3567888887766443


Q ss_pred             HhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcchhhecccchhhccChhHHHHHHHhh
Q psy8357          96 KTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQVMLYVDGMTGIMDHPPTVQWLYVLV  175 (276)
Q Consensus        96 ktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q~mlYvdGM~gvi~h~~tvqwLYsL~  175 (276)
                      . |+.  +.+.-.   .-++..|+..+++.+       ..+..+.+.++.+|++.+-...++....+.....|+.|-.+.
T Consensus        86 ~-l~~--~~~~~~---~i~~~g~i~~Li~lL-------~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL  152 (529)
T d1jdha_          86 N-LSH--HREGLL---AIFKSGGIPALVKML-------GSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALL  152 (529)
T ss_dssp             H-HTT--SHHHHH---HHHHTTHHHHHHHHT-------TCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGG
T ss_pred             H-HhC--CchhHH---HHHHCCCHHHHHHHh-------CCCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHH
Confidence            2 221  222222   245678899999885       445567888999999988877777776677777788888887


Q ss_pred             cCCchhHHHHHHhhheeeE
Q psy8357         176 ASKFRLVIKTALKLLLIFV  194 (276)
Q Consensus       176 ~S~~rlVvKtaLkLLlVfv  194 (276)
                      .++...+...|...|-.++
T Consensus       153 ~~~~~~~~~~a~~~L~~l~  171 (529)
T d1jdha_         153 NKTNVKFLAITTDCLQILA  171 (529)
T ss_dssp             GCCCHHHHHHHHHHHHHHH
T ss_pred             HccChHHHHHHHHHHHHHh
Confidence            7766666666655554443

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Plakophilin 1 helical region
domain: Plakophilin 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.19  E-value=2.5  Score=33.21  Aligned_cols=160  Identities=14%  Similarity=0.068  Sum_probs=88.9

Q ss_pred             HHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhcc
Q psy8357          71 NIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALGQ  150 (276)
Q Consensus        71 ~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~q  150 (276)
                      .++++|.   ++|.|++.+|-+.|-..+.+=   |.....  -.+..|+..+++.+       ..+..+.+..+++||++
T Consensus         6 ~lv~~L~---~~~~~~~~~a~~~l~~l~~~~---~~~~~~--i~~~g~i~~Lv~lL-------~~~~~~v~~~a~~aL~~   70 (457)
T d1xm9a1           6 KAVQYLS---SQDEKYQAIGAYYIQHTCFQD---ESAKQQ--VYQLGGICKLVDLL-------RSPNQNVQQAAAGALRN   70 (457)
T ss_dssp             HHHHHHH---SSCTHHHHHHHHHHHHHTSSC---SSHHHH--HHHTTHHHHHHHHT-------TSSCHHHHHHHHHHHHH
T ss_pred             HHHHHhC---CCCHHHHHHHHHHHHHHHcCC---HHHHHH--HHHCCcHHHHHHHH-------CCCCHHHHHHHHHHHHH
Confidence            5788884   899999999988776665442   233333  24667888888774       44555677777888887


Q ss_pred             hhh-ecccchhhccChhHHHHHHHhhcC-CchhHHHHHHhhheeeEeeccCchHHHHHHHHHhhhc----CCCCCchHHH
Q psy8357         151 VML-YVDGMTGIMDHPPTVQWLYVLVAS-KFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAVDNS----NGEPPWSNIM  224 (276)
Q Consensus       151 ~ml-YvdGM~gvi~h~~tvqwLYsL~~S-~~rlVvKtaLkLLlVfvey~e~n~~l~~~Av~~v~~~----~~~~pwsnlm  224 (276)
                      +.. ..+.-..+.++ ..|..|..+..+ ....+...|.++|--+++..+........++......    ....++....
T Consensus        71 L~~~~~~~~~~i~~~-g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  149 (457)
T d1xm9a1          71 LVFRSTTNKLETRRQ-NGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSN  149 (457)
T ss_dssp             HHSSCHHHHHHHHHT-TCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHHHHHHHHHHHTTHHHHTCC-----
T ss_pred             HHcCCHHHHHHHHHC-CChHHHHHHHhccCcHHHHHHHHHHHHHHHhhhhhHHHHHhcccHHHHHHHHhhhhhhhcchhh
Confidence            753 22223334443 345666665544 4456677788777777665443222332332221111    1111222222


Q ss_pred             HhhccCCCCchHHHHHHHHHHHHHh
Q psy8357         225 RLLTDRDSTDTELLIYAMSLLNKTL  249 (276)
Q Consensus       225 ~lL~~~d~~D~E~~v~amTLiNktL  249 (276)
                      ...   +..+.+++..++..+....
T Consensus       150 ~~~---~~~~~~v~~~a~~~l~~~~  171 (457)
T d1xm9a1         150 MSR---EVVDPEVFFNATGCLRNLS  171 (457)
T ss_dssp             -------CCCHHHHHHHHHHHHHHT
T ss_pred             hhc---ccccHHHHHHHHHHHHHHh
Confidence            222   3567888888887766544

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HspBP1 domain
domain: Hsp70-binding protein 1 (HspBP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.68  E-value=0.54  Score=37.72  Aligned_cols=111  Identities=16%  Similarity=0.187  Sum_probs=73.0

Q ss_pred             hHHHHhhccCCCCchHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHhhHHHHHHhhhhcCCccccCCCCCCchhhhhhc
Q psy8357          70 SNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAAVIRSLDQHGIKYTTSSTDLPTEPLVALG  149 (276)
Q Consensus        70 s~lm~lL~~~ds~D~EllvyamTLiNktL~~lpDqDs~yD~~d~Le~~Gme~i~~~~~~~~~~~~~~~tn~q~YiLrAl~  149 (276)
                      ..++++|..  ..+.++...|...+...+..-|+   -.  ....+..|+..+++.+       .....+.+.+++++++
T Consensus       104 ~~Lv~lL~~--~~~~~v~~~a~~aL~~l~~~~~~---~~--~~~~~~~gi~~L~~lL-------~~~~~~~~~~a~~~L~  169 (264)
T d1xqra1         104 RKLLRLLDR--DACDTVRVKALFAISCLVREQEA---GL--LQFLRLDGFSVLMRAM-------QQQVQKLKVKSAFLLQ  169 (264)
T ss_dssp             HHHHHHHHH--CSCHHHHHHHHHHHHHHHTTCHH---HH--HHHHHTTHHHHHHHHH-------HSSCHHHHHHHHHHHH
T ss_pred             HHHHHHhhc--CCCHHHHHHHHHHHHHHhccchh---hH--HHHHHhhhhhHHHHHH-------hcCchHHHHHHHHHHH
Confidence            357787852  46788888887777766655442   11  1235677888887774       3345567778888888


Q ss_pred             chhhecccchhhccChhHHHHHHHhhcCCchhHHHHHHhhheeeE
Q psy8357         150 QVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFV  194 (276)
Q Consensus       150 q~mlYvdGM~gvi~h~~tvqwLYsL~~S~~rlVvKtaLkLLlVfv  194 (276)
                      ++....+.-...+.....++-|..|..|+...+-+.|+..|.-++
T Consensus       170 ~l~~~~~~~~~~~~~~~~v~~L~~lL~~~~~~~~~~a~~aL~~L~  214 (264)
T d1xqra1         170 NLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLV  214 (264)
T ss_dssp             HHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHH
T ss_pred             HHHhccHHHHHHHHHhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence            876544333333444467888999998877777777776665543