Psyllid ID: psy8371

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------53
MALNKLSVDLLNLAGKRVLMRVDFNVPMKEAALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVVRSSADIESLLRLIYCLKSI
ccccccccccccccccEEEEEEccccccccccHHHHHHHHHccccEEEEEccccccccccccccccHHHHHHHHHHHccccccccccccHHHHHHHccccccEEEEEEccccccccccccccccccccccccccHHHHHHHHHccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHcEEEEEHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccEEEccccEEEEcccccccccEEEEcccccccccccccccHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHHHHccccEEEEcccHHHHHHHHccccccccEEcccHHHHHHHHcccccccccccccHHHHHHHcccHHHHHccccccHHHHHHcccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccEEEEEEEEcccccHHHccHHHHHHHHHHHHHHccc
ccccEcEHHHccccccEEEEEccccccEcHHHHHHHHHHHHHcccccEEEccccccccccccccccHHHHHHHHHHHccccEEccccccHHHHHHcccccccEEEEcccHHHcHHHHcEEEcccccEEEccHHHHHHHHHHHHHcccEEEEccHHHcccccHHHHccccccEEEcHHHHHHHHHHHHccccccccEEEEEcccccHHHHHHHHHHcccccEEEEccHHHHHHHHHHHccccccccccHHHHccHHHHHHHHHHHccEEEcccEEEEEccccccccEEEEEcccccccccEEEEEcHHHHHHHHHHHHHccEEEEEccccccccHHHcHHHHHHHHHHHHHHccccEEEEcccHHHHHHHcccccccccEEcccHHHHHHHHccccEEccccHHEcccccccEEEEEEEEHccccccHHHHHccccHHcccccccHHHHHHHHHHHHHccccccccccccHHHEEHHHHcccccccccccHHcEEEEEEEEEEcccccEEEccHHHHHHHHHHHHHHcc
MALNKLSVDLLNLAGKRVLMRVDFNVPMKEAALDTIKYALDKGAKSVVLMShlgrpdgsknlkySLKPVAEELKTLLKKDItflddcvgpkveeacadppagsiillENLRFyveeegkgvnaagEKVKASAEDVKKFRESLRKLGdiyvndafgtahrahssmlgegfeQRASGFLLKKELDYFSkaldnpekpflAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELkgmniggslydpeGAKIVKKLVEKAEknnvklhfpvdfitadkfaedaktgeatvesgvpdgwmgldigpksrelfkepiARAKVIVwngpsgvfefenfakgtKGIMDAVVDVTTKgaitiigggdtatcaakwntedkvshvstgggasLELLEGkikekgfgenpvlgaHVQVHYMYYAEANELPIDITYLRKSiperfqlgssglipAFEYAILSMQKgslnlsgeksdffASYELcfgalgcppripakADLLFEVHLINfsidpqvvrssaDIESLLRLIYCLKSI
MALNKLSVDLLNLAGKRVLMRVDFNVPMKEAALDTIKYALDKGAKSVVLMShlgrpdgsknlkYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGkgvnaagekvkasaedVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEknnvklhfpvdfITADKFAEDAKTGeatvesgvpdgwmGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFsidpqvvrssadIESLLRLIYCLKSI
MALNKLSVDLLNLAGKRVLMRVDFNVPMKEAALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVttkgaitiigggdtatcaaKWNTEDKVSHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVVRSSADIESLLRLIYCLKSI
*****LSVDLLNLAGKRVLMRVDFNVPMKEAALDTIKYALDKGAKSVVLMSHLG******NLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGK******************FRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVVRSSADIESLLRLIYCL***
****KLS*DLLNLAGKRVLMRVDFNVPMKEAALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKG************EDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKG****SGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVVRSSADIESLLRLIYCLKSI
MALNKLSVDLLNLAGKRVLMRVDFNVPMKEAALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGK**************DVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTE*********GGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVVRSSADIESLLRLIYCLKSI
***NKLSVDLLNLAGKRVLMRVDFNVPMKEAALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVVRSSADIESLLRLIYCLKSI
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MALNKLSVDLLNLAGKRVLMRVDFNVPMKEAALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVVRSSADIESLLRLIYCLKSI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query528 2.2.26 [Sep-21-2011]
Q01604415 Phosphoglycerate kinase O yes N/A 0.746 0.949 0.742 1e-173
P91427417 Probable phosphoglycerate yes N/A 0.746 0.944 0.722 1e-168
P00559417 Phosphoglycerate kinase 1 yes N/A 0.742 0.940 0.709 1e-164
Q3T0P6417 Phosphoglycerate kinase 1 yes N/A 0.742 0.940 0.704 1e-163
A5A6K4417 Phosphoglycerate kinase 1 yes N/A 0.742 0.940 0.704 1e-163
P00558417 Phosphoglycerate kinase 1 yes N/A 0.742 0.940 0.704 1e-163
Q5NVB5417 Phosphoglycerate kinase 1 yes N/A 0.742 0.940 0.704 1e-163
Q60HD8417 Phosphoglycerate kinase 1 N/A N/A 0.742 0.940 0.704 1e-163
P50310417 Phosphoglycerate kinase 1 yes N/A 0.742 0.940 0.702 1e-162
P09411417 Phosphoglycerate kinase 1 yes N/A 0.742 0.940 0.702 1e-162
>sp|Q01604|PGK_DROME Phosphoglycerate kinase OS=Drosophila melanogaster GN=Pgk PE=2 SV=2 Back     alignment and function desciption
 Score =  609 bits (1570), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 300/404 (74%), Positives = 339/404 (83%), Gaps = 10/404 (2%)

Query: 1   MALNKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLM 50
           MA NKLS++ L+LAGKRVLMRVDFNVP+KE          AALD+IK AL K AKSVVLM
Sbjct: 1   MAFNKLSIENLDLAGKRVLMRVDFNVPIKEGKITSNQRIVAALDSIKLALSKKAKSVVLM 60

Query: 51  SHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENL 110
           SHLGRPDG+KN+KY+L PVA ELKTLL +D+ FL DCVG +VE AC DP  GS+ILLEN+
Sbjct: 61  SHLGRPDGNKNIKYTLAPVAAELKTLLGQDVIFLSDCVGSEVEAACKDPAPGSVILLENV 120

Query: 111 RFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFE 170
           RFYVEEEGKG++A+G KVKA    VK+FR SL KLGD+YVNDAFGTAHRAHSSM+G+GFE
Sbjct: 121 RFYVEEEGKGLDASGGKVKADPAKVKEFRASLAKLGDVYVNDAFGTAHRAHSSMMGDGFE 180

Query: 171 QRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSY 230
           QRA+G LL KEL YFS+ALD P  PFLAILGGAKVADKIQLIENLLDKVNEMIIGGGM++
Sbjct: 181 QRAAGLLLNKELKYFSQALDKPPNPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMAF 240

Query: 231 TFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEAT 290
           TFLK L  M IGGSL+D EG+KIV+KLVEKA+KNNV+LH PVDF+  DKFAE+A   EAT
Sbjct: 241 TFLKVLNNMKIGGSLFDEEGSKIVEKLVEKAKKNNVQLHLPVDFVCGDKFAENAAVSEAT 300

Query: 291 VESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDV 350
           VE+G+PDG MGLD+GPK+RELF  PIARAK+IVWNGP GVFEF NFA GTK IMD VV  
Sbjct: 301 VEAGIPDGHMGLDVGPKTRELFAAPIARAKLIVWNGPPGVFEFPNFANGTKSIMDGVVAA 360

Query: 351 TTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGK 394
           T  G ++IIGGGDTA+C AKWNTE  VSHVSTGGGASLELLEGK
Sbjct: 361 TKNGTVSIIGGGDTASCCAKWNTEALVSHVSTGGGASLELLEGK 404

Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 2EC: .EC: 3
>sp|P91427|PGK_CAEEL Probable phosphoglycerate kinase OS=Caenorhabditis elegans GN=pgk-1 PE=1 SV=1 Back     alignment and function description
>sp|P00559|PGK1_HORSE Phosphoglycerate kinase 1 OS=Equus caballus GN=PGK1 PE=1 SV=2 Back     alignment and function description
>sp|Q3T0P6|PGK1_BOVIN Phosphoglycerate kinase 1 OS=Bos taurus GN=PGK1 PE=2 SV=3 Back     alignment and function description
>sp|A5A6K4|PGK1_PANTR Phosphoglycerate kinase 1 OS=Pan troglodytes GN=PGK1 PE=2 SV=1 Back     alignment and function description
>sp|P00558|PGK1_HUMAN Phosphoglycerate kinase 1 OS=Homo sapiens GN=PGK1 PE=1 SV=3 Back     alignment and function description
>sp|Q5NVB5|PGK1_PONAB Phosphoglycerate kinase 1 OS=Pongo abelii GN=PGK1 PE=2 SV=4 Back     alignment and function description
>sp|Q60HD8|PGK1_MACFA Phosphoglycerate kinase 1 OS=Macaca fascicularis GN=PGK1 PE=2 SV=3 Back     alignment and function description
>sp|P50310|PGK1_CRIGR Phosphoglycerate kinase 1 OS=Cricetulus griseus GN=PGK1 PE=2 SV=2 Back     alignment and function description
>sp|P09411|PGK1_MOUSE Phosphoglycerate kinase 1 OS=Mus musculus GN=Pgk1 PE=1 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query528
389609133415 phosphoglycerate kinase [Papilio xuthus] 0.748 0.951 0.785 0.0
357610086415 putative phosphoglycerate kinase [Danaus 0.748 0.951 0.785 0.0
91084675440 PREDICTED: similar to putative phosphogl 0.748 0.897 0.780 0.0
345479324468 PREDICTED: phosphoglycerate kinase-like 0.748 0.844 0.770 0.0
332376933415 unknown [Dendroctonus ponderosae] 0.748 0.951 0.762 1e-178
322791271478 hypothetical protein SINV_08663 [Solenop 0.748 0.826 0.753 1e-178
332024718415 Phosphoglycerate kinase [Acromyrmex echi 0.748 0.951 0.750 1e-178
307177429415 Phosphoglycerate kinase [Camponotus flor 0.748 0.951 0.750 1e-177
380014436488 PREDICTED: phosphoglycerate kinase-like 0.748 0.809 0.748 1e-177
110763826415 PREDICTED: phosphoglycerate kinase isofo 0.748 0.951 0.748 1e-177
>gi|389609133|dbj|BAM18178.1| phosphoglycerate kinase [Papilio xuthus] Back     alignment and taxonomy information
 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/405 (78%), Positives = 355/405 (87%), Gaps = 10/405 (2%)

Query: 1   MALNKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLM 50
           MALNKLS+D LNLAGKRVLMRVDFNVP+K+          AALD++K+ALDKGAKSVVLM
Sbjct: 1   MALNKLSIDALNLAGKRVLMRVDFNVPLKDGVITNNQRIVAALDSVKFALDKGAKSVVLM 60

Query: 51  SHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENL 110
           SHLGRPDG  NLKY+LKPVA+ELK LL KD+TFL DCVG +VE ACADPP+GSIILLENL
Sbjct: 61  SHLGRPDGQANLKYTLKPVADELKKLLNKDVTFLSDCVGSEVEAACADPPSGSIILLENL 120

Query: 111 RFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFE 170
           RF++EEEGKGV+A+G KVKA AE VK FR SLRKLGD+Y+NDAFGTAHRAHSSM+GEGF+
Sbjct: 121 RFHIEEEGKGVDASGAKVKADAEKVKAFRASLRKLGDVYINDAFGTAHRAHSSMMGEGFD 180

Query: 171 QRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSY 230
           QRASGFLLKKEL YF+KAL  PE+PFLAILGGAKVADKI LIENLLDKVNEMIIGGGM+Y
Sbjct: 181 QRASGFLLKKELQYFAKALHEPERPFLAILGGAKVADKILLIENLLDKVNEMIIGGGMAY 240

Query: 231 TFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEAT 290
           TFLKE KGM +G SLYD EGAKIV KL+EKA KNNVK+H PVDF+TADKF E+A+ G A 
Sbjct: 241 TFLKETKGMAMGNSLYDGEGAKIVGKLLEKAAKNNVKVHLPVDFVTADKFDENAQVGTAD 300

Query: 291 VESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDV 350
           V+SG+PDGWMGLD+GPK+RELF EPIARAKVIVWNGP+GVFEFE FA GT+ +MD VV  
Sbjct: 301 VDSGIPDGWMGLDVGPKTRELFAEPIARAKVIVWNGPAGVFEFEKFAGGTRALMDCVVKA 360

Query: 351 TTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
           T  GA+TIIGGGDTATC AKW TEDKVSHV TGGGASLELLEGK+
Sbjct: 361 TNSGAVTIIGGGDTATCCAKWGTEDKVSHVPTGGGASLELLEGKV 405

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|357610086|gb|EHJ66818.1| putative phosphoglycerate kinase [Danaus plexippus] Back     alignment and taxonomy information
>gi|91084675|ref|XP_968140.1| PREDICTED: similar to putative phosphoglycerate kinase [Tribolium castaneum] gi|270008926|gb|EFA05374.1| hypothetical protein TcasGA2_TC015540 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|345479324|ref|XP_001606843.2| PREDICTED: phosphoglycerate kinase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|332376933|gb|AEE63606.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|322791271|gb|EFZ15795.1| hypothetical protein SINV_08663 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|332024718|gb|EGI64907.1| Phosphoglycerate kinase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307177429|gb|EFN66567.1| Phosphoglycerate kinase [Camponotus floridanus] Back     alignment and taxonomy information
>gi|380014436|ref|XP_003691238.1| PREDICTED: phosphoglycerate kinase-like [Apis florea] Back     alignment and taxonomy information
>gi|110763826|ref|XP_395047.3| PREDICTED: phosphoglycerate kinase isoform 1 [Apis mellifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query528
FB|FBgn0250906415 Pgk "Phosphoglycerate kinase" 0.746 0.949 0.712 5.5e-148
WB|WBGene00020185417 pgk-1 [Caenorhabditis elegans 0.746 0.944 0.685 6.8e-143
UNIPROTKB|P91427417 pgk-1 "Probable phosphoglycera 0.746 0.944 0.685 6.8e-143
UNIPROTKB|P00559417 PGK1 "Phosphoglycerate kinase 0.748 0.947 0.670 3.5e-139
UNIPROTKB|Q3T0P6417 PGK1 "Phosphoglycerate kinase 0.748 0.947 0.665 9.2e-139
UNIPROTKB|P00558417 PGK1 "Phosphoglycerate kinase 0.748 0.947 0.665 1.9e-138
UNIPROTKB|P50310417 PGK1 "Phosphoglycerate kinase 0.748 0.947 0.663 1.1e-137
MGI|MGI:97563417 Pgk2 "phosphoglycerate kinase 0.748 0.947 0.658 1.3e-137
UNIPROTKB|E2RRC9417 PGK1 "Phosphoglycerate kinase" 0.748 0.947 0.665 2.2e-137
UNIPROTKB|Q7SIB7417 PGK1 "Phosphoglycerate kinase 0.748 0.947 0.660 2.2e-137
FB|FBgn0250906 Pgk "Phosphoglycerate kinase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1445 (513.7 bits), Expect = 5.5e-148, P = 5.5e-148
 Identities = 288/404 (71%), Positives = 324/404 (80%)

Query:     1 MALNKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLM 50
             MA NKLS++ L+LAGKRVLMRVDFNVP+KE          AALD+IK AL K AKSVVLM
Sbjct:     1 MAFNKLSIENLDLAGKRVLMRVDFNVPIKEGKITSNQRIVAALDSIKLALSKKAKSVVLM 60

Query:    51 SHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENL 110
             SHLGRPDG+KN+KY+L PVA ELKTLL +D+ FL DCVG +VE AC DP  GS+ILLEN+
Sbjct:    61 SHLGRPDGNKNIKYTLAPVAAELKTLLGQDVIFLSDCVGSEVEAACKDPAPGSVILLENV 120

Query:   111 RFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFE 170
             RFYVEEEGKG++A+G KVKA    VK+FR SL KLGD+YVNDAFGTAHRAHSSM+G+GFE
Sbjct:   121 RFYVEEEGKGLDASGGKVKADPAKVKEFRASLAKLGDVYVNDAFGTAHRAHSSMMGDGFE 180

Query:   171 QRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSY 230
             QRA+G LL KEL YFS+ALD P  PFLAILGGAKVADKIQLIENLLDKVNEMIIGGGM++
Sbjct:   181 QRAAGLLLNKELKYFSQALDKPPNPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMAF 240

Query:   231 TFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEAT 290
             TFLK L  M IGGSL+D EG+KIV+KLVEKA+KNNV+LH PVDF+  DKFAE+A   EAT
Sbjct:   241 TFLKVLNNMKIGGSLFDEEGSKIVEKLVEKAKKNNVQLHLPVDFVCGDKFAENAAVSEAT 300

Query:   291 VESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDV 350
             VE+G+PDG MGLD+GPK+RELF  PIARAK+IVWNGP GVFEF NFA GTK IMD VV  
Sbjct:   301 VEAGIPDGHMGLDVGPKTRELFAAPIARAKLIVWNGPPGVFEFPNFANGTKSIMDGVVAA 360

Query:   351 XXXXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
                                KWNTE  VSHVSTGGGASLELLEGK
Sbjct:   361 TKNGTVSIIGGGDTASCCAKWNTEALVSHVSTGGGASLELLEGK 404
GO:0004618 "phosphoglycerate kinase activity" evidence=ISS;NAS
GO:0005737 "cytoplasm" evidence=NAS
GO:0006096 "glycolysis" evidence=IEA;NAS
GO:0031430 "M band" evidence=IDA
GO:0030018 "Z disc" evidence=IDA
GO:0007268 "synaptic transmission" evidence=IDA
GO:0046716 "muscle cell homeostasis" evidence=IGI
WB|WBGene00020185 pgk-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|P91427 pgk-1 "Probable phosphoglycerate kinase" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|P00559 PGK1 "Phosphoglycerate kinase 1" [Equus caballus (taxid:9796)] Back     alignment and assigned GO terms
UNIPROTKB|Q3T0P6 PGK1 "Phosphoglycerate kinase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P00558 PGK1 "Phosphoglycerate kinase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P50310 PGK1 "Phosphoglycerate kinase 1" [Cricetulus griseus (taxid:10029)] Back     alignment and assigned GO terms
MGI|MGI:97563 Pgk2 "phosphoglycerate kinase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RRC9 PGK1 "Phosphoglycerate kinase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q7SIB7 PGK1 "Phosphoglycerate kinase 1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P16617PGK1_RAT2, ., 7, ., 2, ., 30.70220.74240.9400yesN/A
P51903PGK_CHICK2, ., 7, ., 2, ., 30.69970.74240.9400yesN/A
P29407PGK_YARLI2, ., 7, ., 2, ., 30.63840.74050.9376yesN/A
O60101PGK_SCHPO2, ., 7, ., 2, ., 30.63590.73670.9396yesN/A
Q9GPM4PGK_DICDI2, ., 7, ., 2, ., 30.63680.74050.9309yesN/A
Q3T0P6PGK1_BOVIN2, ., 7, ., 2, ., 30.70470.74240.9400yesN/A
P00558PGK1_HUMAN2, ., 7, ., 2, ., 30.70470.74240.9400yesN/A
P00559PGK1_HORSE2, ., 7, ., 2, ., 30.70960.74240.9400yesN/A
P09411PGK1_MOUSE2, ., 7, ., 2, ., 30.70220.74240.9400yesN/A
Q6BLA0PGK_DEBHA2, ., 7, ., 2, ., 30.63840.73860.9375yesN/A
Q757Q0PGK_ASHGO2, ., 7, ., 2, ., 30.61340.73860.9375yesN/A
P29408PGK1_MACEU2, ., 7, ., 2, ., 30.70140.74050.9376N/AN/A
P27362PGK_PLAF72, ., 7, ., 2, ., 30.58760.74620.9471yesN/A
Q7ZA46PGK_PICPA2, ., 7, ., 2, ., 30.63590.73860.9375yesN/A
Q6FKY1PGK_CANGA2, ., 7, ., 2, ., 30.61090.73860.9375yesN/A
Q7SIB7PGK1_PIG2, ., 7, ., 2, ., 30.69970.74240.9400yesN/A
Q01604PGK_DROME2, ., 7, ., 2, ., 30.74250.74620.9493yesN/A
P14828PGK_KLULA2, ., 7, ., 2, ., 30.60090.73860.9375yesN/A
Q8MIF7PGK2_HORSE2, ., 7, ., 2, ., 30.68650.74050.9376yesN/A
P11977PGK_EMENI2, ., 7, ., 2, ., 30.62120.74050.9287yesN/A
P41756PGK_ASPOR2, ., 7, ., 2, ., 30.62030.74240.9400yesN/A
P50310PGK1_CRIGR2, ., 7, ., 2, ., 30.70220.74240.9400yesN/A
Q60HD8PGK1_MACFA2, ., 7, ., 2, ., 30.70470.74240.9400N/AN/A
A5A6K4PGK1_PANTR2, ., 7, ., 2, ., 30.70470.74240.9400yesN/A
P91427PGK_CAEEL2, ., 7, ., 2, ., 30.72270.74620.9448yesN/A
Q5NVB5PGK1_PONAB2, ., 7, ., 2, ., 30.70470.74240.9400yesN/A
P00560PGK_YEAST2, ., 7, ., 2, ., 30.61590.73860.9375yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer5.3.1.10.824
3rd Layer2.7.20.963
3rd Layer5.2.1LOW CONFIDENCE prediction!
3rd Layer2.7.2.30.946
4th Layer5.2.1.8LOW CONFIDENCE prediction!
3rd Layer5.3.10.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
PTZ00005417 PTZ00005, PTZ00005, phosphoglycerate kinase; Provi 0.0
cd00318397 cd00318, Phosphoglycerate_kinase, Phosphoglycerate 0.0
pfam00162383 pfam00162, PGK, Phosphoglycerate kinase 0.0
PRK00073389 PRK00073, pgk, phosphoglycerate kinase; Provisiona 1e-175
COG0126395 COG0126, Pgk, 3-phosphoglycerate kinase [Carbohydr 1e-167
PRK13962 645 PRK13962, PRK13962, bifunctional phosphoglycerate 1e-151
PLN02282401 PLN02282, PLN02282, phosphoglycerate kinase 1e-117
PLN03034481 PLN03034, PLN03034, phosphoglycerate kinase; Provi 1e-114
pfam0025494 pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-t 3e-10
COG0545205 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans 5e-05
>gnl|CDD|173310 PTZ00005, PTZ00005, phosphoglycerate kinase; Provisional Back     alignment and domain information 
 Score =  662 bits (1709), Expect = 0.0
 Identities = 276/407 (67%), Positives = 322/407 (79%), Gaps = 12/407 (2%)

Query: 1   MALNKLSVD--LLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVV 48
           M  NKL +D     L GKRVL+RVDFNVP+KE          A L TIKY L++GAKSVV
Sbjct: 1   MLSNKLGIDDVDDQLKGKRVLIRVDFNVPIKEGVIKDATRIKATLPTIKYLLEQGAKSVV 60

Query: 49  LMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLE 108
           LMSHLGRPDG +  KYSLKPV  +L+ LL K +TFL+DCVGP+VEEACA+   GS+ILLE
Sbjct: 61  LMSHLGRPDGRRVEKYSLKPVVPKLEELLGKKVTFLNDCVGPEVEEACANAKNGSVILLE 120

Query: 109 NLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEG 168
           NLRF++EEEGKGV+A G KVKA  E+VKKFR+SL KLGDIYVNDAFGTAHRAHSSM+G  
Sbjct: 121 NLRFHIEEEGKGVDANGNKVKADKEEVKKFRKSLTKLGDIYVNDAFGTAHRAHSSMVGVD 180

Query: 169 FEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGM 228
              + +GFL+KKELDYFSKAL+NP++PFLAILGGAKVADKIQLI+NLLDKV+EMIIGGGM
Sbjct: 181 LPVKVAGFLMKKELDYFSKALENPQRPFLAILGGAKVADKIQLIKNLLDKVDEMIIGGGM 240

Query: 229 SYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGE 288
           ++TF K L  M IG SL+D EGAKIVK+++EKA++ NVK+H PVDF+ ADKF  +A T  
Sbjct: 241 AFTFKKVLDNMPIGKSLFDEEGAKIVKEIMEKAKEKNVKIHLPVDFVCADKFDNNANTKV 300

Query: 289 ATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVV 348
            T + G+PDGWMGLD GPKS E F E I RAK IVWNGP GVFE  NFAKG+  ++DAVV
Sbjct: 301 VTDKEGIPDGWMGLDAGPKSIEEFAEAILRAKTIVWNGPQGVFEMPNFAKGSIAMLDAVV 360

Query: 349 DVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
             T KGAITI+GGGDTA+   K    +KVSHVSTGGGASLELLEGK 
Sbjct: 361 KATEKGAITIVGGGDTASLVEKTGAANKVSHVSTGGGASLELLEGKE 407

Length = 417
>gnl|CDD|238195 cd00318, Phosphoglycerate_kinase, Phosphoglycerate kinase (PGK) is a monomeric enzyme which catalyzes the transfer of the high-energy phosphate group of 1,3-bisphosphoglycerate to ADP, forming ATP and 3-phosphoglycerate Back     alignment and domain information
>gnl|CDD|215761 pfam00162, PGK, Phosphoglycerate kinase Back     alignment and domain information
>gnl|CDD|234613 PRK00073, pgk, phosphoglycerate kinase; Provisional Back     alignment and domain information
>gnl|CDD|223204 COG0126, Pgk, 3-phosphoglycerate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|237572 PRK13962, PRK13962, bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional Back     alignment and domain information
>gnl|CDD|165923 PLN02282, PLN02282, phosphoglycerate kinase Back     alignment and domain information
>gnl|CDD|178602 PLN03034, PLN03034, phosphoglycerate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215821 pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-trans isomerase Back     alignment and domain information
>gnl|CDD|223619 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 528
PTZ00005417 phosphoglycerate kinase; Provisional 100.0
COG0126395 Pgk 3-phosphoglycerate kinase [Carbohydrate transp 100.0
KOG1367|consensus416 100.0
cd00318397 Phosphoglycerate_kinase Phosphoglycerate kinase (P 100.0
PLN03034481 phosphoglycerate kinase; Provisional 100.0
PLN02282401 phosphoglycerate kinase 100.0
PRK00073389 pgk phosphoglycerate kinase; Provisional 100.0
PF00162384 PGK: Phosphoglycerate kinase; InterPro: IPR001576 100.0
PRK13962 645 bifunctional phosphoglycerate kinase/triosephospha 100.0
COG0545205 FkpA FKBP-type peptidyl-prolyl cis-trans isomerase 99.92
KOG0544|consensus108 99.92
KOG0549|consensus188 99.9
PRK11570206 peptidyl-prolyl cis-trans isomerase; Provisional 99.84
TIGR03516177 ppisom_GldI peptidyl-prolyl isomerase, gliding mot 99.82
KOG0552|consensus226 99.82
PF0025494 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomer 99.76
PRK10902269 FKBP-type peptidyl-prolyl cis-trans isomerase; Pro 99.76
KOG0543|consensus 397 99.46
PRK15095156 FKBP-type peptidyl-prolyl cis-trans isomerase; Pro 99.36
COG1047174 SlpA FKBP-type peptidyl-prolyl cis-trans isomerase 99.13
PRK10737196 FKBP-type peptidyl-prolyl cis-trans isomerase; Pro 99.03
KOG0543|consensus 397 98.85
TIGR00115 408 tig trigger factor. Trigger factor is a ribosome-a 98.45
PRK01490 435 tig trigger factor; Provisional 98.29
COG0544 441 Tig FKBP-type peptidyl-prolyl cis-trans isomerase 98.02
KOG0545|consensus 329 96.28
KOG0549|consensus 188 95.65
>PTZ00005 phosphoglycerate kinase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.4e-131  Score=1035.34  Aligned_cols=401  Identities=69%  Similarity=1.068  Sum_probs=378.5

Q ss_pred             CCCCcccccccc--cCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHH
Q psy8371           1 MALNKLSVDLLN--LAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKP   68 (528)
Q Consensus         1 ~~~~~~ti~d~~--~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~   68 (528)
                      |.|+++||+|+|  ++|||||||||||||+++          +++|||+||+++|||+|||+||||||+|++++++||+|
T Consensus         1 ~~~~~~ti~d~~~~~~gK~VllRvD~NvPi~~g~I~Dd~RI~~~lpTI~~L~~~gak~vvl~SHlGRP~g~~~~~~SL~~   80 (417)
T PTZ00005          1 MLSNKLGIDDVDDQLKGKRVLIRVDFNVPIKEGVIKDATRIKATLPTIKYLLEQGAKSVVLMSHLGRPDGRRVEKYSLKP   80 (417)
T ss_pred             CCcccCcHHHhhhccCCCEEEEEecCCCCCcCCcCCChHhHHHHHHHHHHHHHCCCCEEEEEecCCCCCCCcCcccCHHH
Confidence            778999999999  999999999999999953          99999999999999769999999999987788999999


Q ss_pred             HHHHHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCE
Q psy8371          69 VAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDI  148 (528)
Q Consensus        69 ~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~Di  148 (528)
                      ||++|+++|+++|.|++||+|+.++++|++|++||||||||||||++|+.+..+.+..++++++++++.||++||+|||+
T Consensus        81 va~~L~~lL~~~V~fv~d~~g~~~~~~i~~l~~GeVlLLENvRF~~~Ee~~~~~~~~~~~~~d~~~~~~fa~~LA~l~Di  160 (417)
T PTZ00005         81 VVPKLEELLGKKVTFLNDCVGPEVEEACANAKNGSVILLENLRFHIEEEGKGVDANGNKVKADKEEVKKFRKSLTKLGDI  160 (417)
T ss_pred             HHHHHHHHHCCCeEECCCCCCHHHHHHHHcCCCCCEEEEeccccccccccccccccccccCCCHHHHHHHHHHHHhhCCE
Confidence            99999999999999999999999999999999999999999999999987543434445677888899999999999999


Q ss_pred             EEecccccccccCcccccccccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHH
Q psy8371         149 YVNDAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGM  228 (528)
Q Consensus       149 yVnDAF~~aHR~haS~~g~~~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~m  228 (528)
                      |||||||+|||+|||++||+.+++|||+||||||++|++++++|+||++||+|||||||||.+|+||+++||+|++||+|
T Consensus       161 yVNDAFg~aHR~haS~~gi~~~~s~aG~lmekEl~~L~~~~~~p~rP~vaIlGGaKvsdKi~vl~~Ll~k~D~iligG~m  240 (417)
T PTZ00005        161 YVNDAFGTAHRAHSSMVGVDLPVKVAGFLMKKELDYFSKALENPQRPFLAILGGAKVADKIQLIKNLLDKVDEMIIGGGM  240 (417)
T ss_pred             EEecchhhhhhhcccccccCCccchhhHHHHHHHHHHHHHhcCCCCceEEEEcCccHHhHHHHHHHHHHhcCEEEECcHH
Confidence            99999999999999999999755899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCCCCCCCcccccChhH
Q psy8371         229 SYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKS  308 (528)
Q Consensus       229 a~tFl~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~T  308 (528)
                      |||||+|.+|++||+|++|++.++.|++|+++++++|++|+||+|++|+++|+.++++..+....+||+|||++||||+|
T Consensus       241 a~tFL~A~~G~~iG~sl~E~~~i~~a~~il~~a~~~~~~I~lPvD~~v~~~~~~~~~~~~~~~~~~ip~~~~~lDIGp~T  320 (417)
T PTZ00005        241 AFTFKKVLDNMPIGKSLFDEEGAKIVKEIMEKAKEKNVKIHLPVDFVCADKFDNNANTKVVTDKEGIPDGWMGLDAGPKS  320 (417)
T ss_pred             HHHHHHHhCCCccCccccChhhHHHHHHHHHHHHhcCCEEeCCceEEEecccCCCCCeEEecCccCCCCCCEEeccCHHH
Confidence            99999995589999999999999999999999999999999999999999998888766663345799999999999999


Q ss_pred             HHHHHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcch
Q psy8371         309 RELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASL  388 (528)
Q Consensus       309 i~~~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~l  388 (528)
                      ++.|+++|++|+||||||||||||+++|+.||++|+++++++++++++||+|||||++|++++|+.++|+|+||||||+|
T Consensus       321 i~~~~~~i~~akTV~wNGP~GvFE~~~F~~GT~~i~~aia~~t~~~a~sivGGGdt~aAi~~~g~~~~~shvSTGGGA~L  400 (417)
T PTZ00005        321 IEEFAEAILRAKTIVWNGPQGVFEMPNFAKGSIAMLDAVVKATEKGAITIVGGGDTASLVEKTGAANKVSHVSTGGGASL  400 (417)
T ss_pred             HHHHHHHHhhCCEEEEECCCccccCCcchHHHHHHHHHHHHhccCCCEEEEeCcHHHHHHHHcCCCCCCceEcCchHHHH
Confidence            99999999999999999999999999999999999999998776778999999999999999999999999999999999


Q ss_pred             hhhhhhccccCCC
Q psy8371         389 ELLEGKIKEKGFG  401 (528)
Q Consensus       389 e~L~~k~Lp~g~G  401 (528)
                      +||+|++||+.+.
T Consensus       401 e~LeGk~LPgv~a  413 (417)
T PTZ00005        401 ELLEGKELPGVVA  413 (417)
T ss_pred             HHHcCCCcchHHH
Confidence            9999999999763

>COG0126 Pgk 3-phosphoglycerate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1367|consensus Back     alignment and domain information
>cd00318 Phosphoglycerate_kinase Phosphoglycerate kinase (PGK) is a monomeric enzyme which catalyzes the transfer of the high-energy phosphate group of 1,3-bisphosphoglycerate to ADP, forming ATP and 3-phosphoglycerate Back     alignment and domain information
>PLN03034 phosphoglycerate kinase; Provisional Back     alignment and domain information
>PLN02282 phosphoglycerate kinase Back     alignment and domain information
>PRK00073 pgk phosphoglycerate kinase; Provisional Back     alignment and domain information
>PF00162 PGK: Phosphoglycerate kinase; InterPro: IPR001576 Phosphoglycerate kinase (2 Back     alignment and domain information
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional Back     alignment and domain information
>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0544|consensus Back     alignment and domain information
>KOG0549|consensus Back     alignment and domain information
>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional Back     alignment and domain information
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated Back     alignment and domain information
>KOG0552|consensus Back     alignment and domain information
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5 Back     alignment and domain information
>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional Back     alignment and domain information
>KOG0543|consensus Back     alignment and domain information
>PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional Back     alignment and domain information
>COG1047 SlpA FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10737 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional Back     alignment and domain information
>KOG0543|consensus Back     alignment and domain information
>TIGR00115 tig trigger factor Back     alignment and domain information
>PRK01490 tig trigger factor; Provisional Back     alignment and domain information
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0545|consensus Back     alignment and domain information
>KOG0549|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
1kf0_A416 Crystal Structure Of Pig Muscle Phosphoglycerate Ki 1e-154
1vjc_A416 Structure Of Pig Muscle Pgk Complexed With Mgatp Le 1e-152
2zgv_A420 Crystal Structure Of Human Phosphoglycerate Kinase 1e-152
2xe6_A417 The Complete Reaction Cycle Of Human Phosphoglycera 1e-152
2y3i_A416 The Structure Of The Fully Closed Conformation Of H 1e-152
2wzb_A416 The Catalytically Active Fully Closed Conformation 1e-152
2x14_A416 The Catalytically Active Fully Closed Conformation 1e-152
2wzd_A417 The Catalytically Active Fully Closed Conformation 1e-151
2p9q_A416 Crystal Structure Of Phosphoglycerate Kinase-2 Leng 1e-151
1hdi_A413 Pig Muscle 3-Phosphoglycerate Kinase Complexed With 1e-145
1qpg_A415 3-Phosphoglycerate Kinase, Mutation R65q Length = 4 1e-128
3pgk_A416 The Structure Of Yeast Phosphoglycerate Kinase At 0 1e-125
3oz7_A417 Crystal Structure Of 3-Phosphopglycerate Kinase Of 1e-123
3oza_A424 Crystal Structure Of Plasmodium Falciparum 3-Phosph 1e-118
1ltk_A425 Crystal Structure Of Phosphoglycerate Kinase From P 1e-118
1fw8_A416 Circularly Permuted Phosphoglycerate Kinase From Ye 1e-111
1vpe_A398 Crystallographic Analysis Of Phosphoglycerate Kinas 1e-88
1php_A394 Structure Of The Adp Complex Of The 3-Phosphoglycer 1e-81
3uwd_A394 Crystal Structure Of Phosphoglycerate Kinase From B 5e-80
13pk_A415 Ternary Complex Of Phosphoglycerate Kinase From Try 1e-71
4dg5_A403 Crystal Structure Of Staphylococcal Phosphoglycerat 4e-70
3q3v_A403 Crystal Structure Of Phosphoglycerate Kinase From C 1e-68
4fey_A395 An X-Ray Structure Of A Putative Phosphogylcerate K 2e-66
4ehj_A392 An X-Ray Structure Of A Putative Phosphogylcerate K 2e-64
1v6s_A390 Crystal Structure Of Phosphoglycerate Kinase From T 5e-61
2ie8_A390 Crystal Structure Of Thermus Caldophilus Phosphogly 1e-60
1zmr_A387 Crystal Structure Of The E. Coli Phosphoglycerate K 1e-53
2cun_A410 Crystal Structure Of Phosphoglycerate Kinase From P 5e-39
3b7x_A134 Crystal Structure Of Human Fk506-Binding Protein 6 2e-09
1kt1_A 457 Structure Of The Large Fkbp-Like Protein, Fkbp51, I 1e-07
1rot_A149 Structure Of Fkbp59-I, The N-Terminal Domain Of A 5 2e-07
1r9h_A135 Structural Genomics Of C.Elegans: Fkbp-Type Peptidy 5e-07
4drj_A144 O-crystal Structure Of The Ppiase Domain Of Fkbp52, 6e-07
1n1a_A140 Crystal Structure Of The N-Terminal Domain Of Human 6e-07
4drh_A144 Co-crystal Structure Of The Ppiase Domain Of Fkbp51 8e-07
3o5e_A144 Fk1 Domain Of Fkbp51, Crystal Form Vi Length = 144 9e-07
1q1c_A280 Crystal Structure Of N(1-260) Of Human Fkbp52 Lengt 1e-06
3o5d_A264 Crystal Structure Of A Fragment Of Fkbp51 Comprisin 1e-06
3o5l_A128 Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I Le 2e-06
3o5g_A128 Fk1 Domain Of Fkbp51, Crystal Form I Length = 128 2e-06
1kt0_A 457 Structure Of The Large Fkbp-like Protein, Fkbp51, I 2e-06
2ki3_A126 Structural And Biochemical Characterization Of Fk50 4e-06
3jym_A 377 Crystal Structure Of The 3 Fkbp Domains Of Wheat Fk 5e-06
3jxv_A 356 Crystal Structure Of The 3 Fkbp Domains Of Wheat Fk 6e-06
2lgo_A130 Solution Nmr Structure Of A Fkbp-Type Peptidyl-Prol 6e-06
2pbc_A102 Fk506-Binding Protein 2 Length = 102 2e-05
2vn1_A129 Crystal Structure Of The Fk506-Binding Domain Of Pl 2e-04
2ofn_A135 Solution Structure Of Fk506-Binding Domain (Fkbd)of 2e-04
>pdb|1KF0|A Chain A, Crystal Structure Of Pig Muscle Phosphoglycerate Kinase Ternary Complex With Amp-Pcp And 3pg Length = 416 Back     alignment and structure 
Iteration: 1

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 273/403 (67%), Positives = 318/403 (78%), Gaps = 11/403 (2%)
Query: 4   NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
           NKL++D LN+ GKRV+MRVDFNVPMK          +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 4   NKLTLDKLNVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDDGAKSVVLMSHL 63
Query: 54  GRPDGSKNL-KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
           GRPDGS    KYSL+PVA ELK+LL KD+ FL DCVGP+VE+ACADP AGS+ILLENLRF
Sbjct: 64  GRPDGSPMPDKYSLQPVAVELKSLLGKDVLFLKDCVGPEVEKACADPAAGSVILLENLRF 123
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
           +VEEEGKG +A+G KVKA    +K FR SL KLGD+YVNDAFGTAHRAHSSM+G    ++
Sbjct: 124 HVEEEGKGKDASGNKVKAEPAKIKTFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPKK 183
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
           A GFL+KKEL+YF+KAL++PE+PFLAILGGAKVADKIQLI N+LDKVNEMIIGGGM++TF
Sbjct: 184 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 243
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
           LK L  M IG SL+D EGAKIVK L+ KAEKN VK+  PVDF+TADKF E AKTG+ATV 
Sbjct: 244 LKVLNNMEIGTSLFDEEGAKIVKNLMSKAEKNGVKITLPVDFVTADKFDEHAKTGQATVA 303
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
           SG+P GWMGLD GP+S + + E +ARAK IVWNGP GVFE+E FA+GTK +MD VV    
Sbjct: 304 SGIPAGWMGLDCGPESSKKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATS 363
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
                            KWNTEDKVSHVSTGGGASLELLEGK+
Sbjct: 364 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKV 406
>pdb|1VJC|A Chain A, Structure Of Pig Muscle Pgk Complexed With Mgatp Length = 416 Back     alignment and structure
>pdb|2ZGV|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound To D-Adp Length = 420 Back     alignment and structure
>pdb|2XE6|A Chain A, The Complete Reaction Cycle Of Human Phosphoglycerate Kinase: The Open Binary Complex With 3pg Length = 417 Back     alignment and structure
>pdb|2Y3I|A Chain A, The Structure Of The Fully Closed Conformation Of Human Pgk In Complex With L-Adp, 3pg And The Tsa Aluminium Tetrafluoride Length = 416 Back     alignment and structure
>pdb|2WZB|A Chain A, The Catalytically Active Fully Closed Conformation Of Human Phosphoglycerate Kinase In Complex With Adp, 3pg And Magnesium Trifluoride Length = 416 Back     alignment and structure
>pdb|2X14|A Chain A, The Catalytically Active Fully Closed Conformation Of Human Phosphoglycerate Kinase K219a Mutant In Complex With Amp-Pcp And 3pg Length = 416 Back     alignment and structure
>pdb|2WZD|A Chain A, The Catalytically Active Fully Closed Conformation Of Human Phosphoglycerate Kinase K219a Mutant In Complex With Adp, 3pg And Aluminium Trifluoride Length = 417 Back     alignment and structure
>pdb|2P9Q|A Chain A, Crystal Structure Of Phosphoglycerate Kinase-2 Length = 416 Back     alignment and structure
>pdb|1HDI|A Chain A, Pig Muscle 3-Phosphoglycerate Kinase Complexed With 3-Pg And Mgadp Length = 413 Back     alignment and structure
>pdb|1QPG|A Chain A, 3-Phosphoglycerate Kinase, Mutation R65q Length = 415 Back     alignment and structure
>pdb|3PGK|A Chain A, The Structure Of Yeast Phosphoglycerate Kinase At 0.25 Nm Resolution Length = 416 Back     alignment and structure
>pdb|3OZ7|A Chain A, Crystal Structure Of 3-Phosphopglycerate Kinase Of Plasmodium Falciparum Length = 417 Back     alignment and structure
>pdb|3OZA|A Chain A, Crystal Structure Of Plasmodium Falciparum 3-Phosphoglycerate Kinase Length = 424 Back     alignment and structure
>pdb|1LTK|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Plasmodium Falciparum, In The Open Conformation Length = 425 Back     alignment and structure
>pdb|1FW8|A Chain A, Circularly Permuted Phosphoglycerate Kinase From Yeast: Pgk P72 Length = 416 Back     alignment and structure
>pdb|1VPE|A Chain A, Crystallographic Analysis Of Phosphoglycerate Kinase From The Hyperthermophilic Bacterium Thermotoga Maritima Length = 398 Back     alignment and structure
>pdb|1PHP|A Chain A, Structure Of The Adp Complex Of The 3-Phosphoglycerate Kinase From Bacillus Stearothermophilus At 1.65 Angstroms Length = 394 Back     alignment and structure
>pdb|3UWD|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Bacillus Anthracis Length = 394 Back     alignment and structure
>pdb|13PK|A Chain A, Ternary Complex Of Phosphoglycerate Kinase From Trypanosoma Brucei Length = 415 Back     alignment and structure
>pdb|4DG5|A Chain A, Crystal Structure Of Staphylococcal Phosphoglycerate Kinase Length = 403 Back     alignment and structure
>pdb|3Q3V|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Campylobacter Jejuni. Length = 403 Back     alignment and structure
>pdb|4FEY|A Chain A, An X-Ray Structure Of A Putative Phosphogylcerate Kinase With Bound Adp From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 395 Back     alignment and structure
>pdb|4EHJ|A Chain A, An X-Ray Structure Of A Putative Phosphogylcerate Kinase From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 392 Back     alignment and structure
>pdb|1V6S|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Thermus Thermophilus Hb8 Length = 390 Back     alignment and structure
>pdb|2IE8|A Chain A, Crystal Structure Of Thermus Caldophilus Phosphoglycerate Kinase In The Open Conformation Length = 390 Back     alignment and structure
>pdb|1ZMR|A Chain A, Crystal Structure Of The E. Coli Phosphoglycerate Kinase Length = 387 Back     alignment and structure
>pdb|2CUN|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Pyrococcus Horikoshii Ot3 Length = 410 Back     alignment and structure
>pdb|3B7X|A Chain A, Crystal Structure Of Human Fk506-Binding Protein 6 Length = 134 Back     alignment and structure
>pdb|1KT1|A Chain A, Structure Of The Large Fkbp-Like Protein, Fkbp51, Involved In Steroid Receptor Complexes Length = 457 Back     alignment and structure
>pdb|1ROT|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda Fk506-Binding Protein, Nmr, Minimized Average Structure Length = 149 Back     alignment and structure
>pdb|1R9H|A Chain A, Structural Genomics Of C.Elegans: Fkbp-Type Peptidylprolyl Isomerase Length = 135 Back     alignment and structure
>pdb|4DRJ|A Chain A, O-crystal Structure Of The Ppiase Domain Of Fkbp52, Rapamycin And The Frb Fragment Of Mtor Length = 144 Back     alignment and structure
>pdb|1N1A|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52 Length = 140 Back     alignment and structure
>pdb|4DRH|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51, Rapamycin And The Frb Fragment Of Mtor At Low Ph Length = 144 Back     alignment and structure
>pdb|3O5E|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vi Length = 144 Back     alignment and structure
>pdb|1Q1C|A Chain A, Crystal Structure Of N(1-260) Of Human Fkbp52 Length = 280 Back     alignment and structure
>pdb|3O5D|A Chain A, Crystal Structure Of A Fragment Of Fkbp51 Comprising The Fk1 And Fk2 Domains Length = 264 Back     alignment and structure
>pdb|3O5L|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I Length = 128 Back     alignment and structure
>pdb|3O5G|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form I Length = 128 Back     alignment and structure
>pdb|1KT0|A Chain A, Structure Of The Large Fkbp-like Protein, Fkbp51, Involved In Steroid Receptor Complexes Length = 457 Back     alignment and structure
>pdb|2KI3|A Chain A, Structural And Biochemical Characterization Of Fk506 Binding Domain From Plasmodium Vivax Length = 126 Back     alignment and structure
>pdb|3JYM|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73 Length = 377 Back     alignment and structure
>pdb|3JXV|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73 Length = 356 Back     alignment and structure
>pdb|2LGO|A Chain A, Solution Nmr Structure Of A Fkbp-Type Peptidyl-Prolyl Cis-Trans Isomerase From Giardia Lamblia, Seattle Structural Genomics Center For Infectious Disease Target Gilaa.00840.A Length = 130 Back     alignment and structure
>pdb|2PBC|A Chain A, Fk506-Binding Protein 2 Length = 102 Back     alignment and structure
>pdb|2VN1|A Chain A, Crystal Structure Of The Fk506-Binding Domain Of Plasmodium Falciparum Fkbp35 In Complex With Fk506 Length = 129 Back     alignment and structure
>pdb|2OFN|A Chain A, Solution Structure Of Fk506-Binding Domain (Fkbd)of Fkbp35 From Plasmodium Falciparum Length = 135 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
3oz7_A417 Phosphoglycerate kinase; transferase, ATP binding, 0.0
2wzb_A416 Phosphoglycerate kinase 1; hereditary hemolytic an 0.0
1qpg_A415 PGK, 3-phosphoglycerate kinase; phosphotransferase 0.0
1vpe_A398 Phosphoglycerate kinase; transferase, hyperthermos 0.0
16pk_A415 PGK, 3-phosphoglycerate kinase; ternary complex, g 0.0
3q3v_A403 Phosphoglycerate kinase; structural genomics, cent 0.0
1php_A394 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobac 0.0
1fw8_A416 PGK P72, phosphoglycerate kinase; phosphotransfera 0.0
1fw8_A416 PGK P72, phosphoglycerate kinase; phosphotransfera 5e-21
1v6s_A390 Phosphoglycerate kinase; riken structu genomics/pr 0.0
2cun_A410 Phosphoglycerate kinase; structural genomics, tanp 0.0
4fey_A395 Phosphoglycerate kinase; structural genomics, niai 1e-180
1zmr_A387 Phosphoglycerate kinase; transferase, glycolysis; 1e-174
3b7x_A134 FK506-binding protein 6; isomerase, repeat, rotama 3e-18
2f4e_A180 ATFKBP42; FKBP-like, alpha-beta, signaling protein 2e-14
1kt0_A 457 FKBP51, 51 kDa FK506-binding protein; FKBP-like pp 1e-13
1kt0_A 457 FKBP51, 51 kDa FK506-binding protein; FKBP-like pp 1e-07
2awg_A118 38 kDa FK-506 binding protein; FKBP-type, ppiase, 1e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
2if4_A 338 ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, 9e-13
2d9f_A135 FK506-binding protein 8 variant; FKBP, rapamycin, 1e-12
2vn1_A129 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR 2e-12
3jxv_A 356 70 kDa peptidyl-prolyl isomerase; FKBP- binding do 2e-12
3jxv_A356 70 kDa peptidyl-prolyl isomerase; FKBP- binding do 1e-11
3jxv_A356 70 kDa peptidyl-prolyl isomerase; FKBP- binding do 1e-11
2pbc_A102 FK506-binding protein 2; endoplasmic reticulum, is 9e-12
2jwx_A157 FKBP38NTD, FK506-binding protein 8 variant; apopto 9e-12
1r9h_A135 FKB-6, FK506 binding protein family; structural ge 2e-11
1q1c_A280 FK506-binding protein 4; rotamase, TPR repeat, nuc 6e-11
1q1c_A280 FK506-binding protein 4; rotamase, TPR repeat, nuc 2e-09
2ppn_A107 FK506-binding protein 1A; high resolution protein 1e-10
1yat_A113 FK506 binding protein; HET: FK5; 2.50A {Saccharomy 2e-10
3o5q_A128 Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 3e-10
3o5e_A144 Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 9e-10
3kz7_A119 FK506-binding protein 3; FKPB ppiase rapamycin, is 3e-09
2lgo_A130 FKBP; infectious disease, isomerase, giardiasis, s 3e-09
1p5q_A 336 FKBP52, FK506-binding protein 4; isomerase; 2.80A 3e-09
4dip_A125 Peptidyl-prolyl CIS-trans isomerase FKBP14; struct 4e-09
3uf8_A209 Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- 5e-09
2y78_A133 Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, 6e-09
1fd9_A213 Protein (macrophage infectivity potentiator prote; 2e-08
1u79_A129 FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T 1e-07
1q6h_A224 FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; 3e-07
3oe2_A219 Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, 4e-07
1jvw_A167 Macrophage infectivity potentiator; chagas disease 8e-07
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} PDB: 1ltk_A* 3oza_A Length = 417 Back     alignment and structure
 Score =  689 bits (1781), Expect = 0.0
 Identities = 238/407 (58%), Positives = 305/407 (74%), Gaps = 12/407 (2%)

Query: 1   MAL-NKLSV-DLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVV 48
             L NKLS+ DL ++  K+VL+RVDFNVP++           A L TI +   +GA  ++
Sbjct: 2   HHLGNKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKII 61

Query: 49  LMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLE 108
           L+SH GRPDG +N KY+LKPVAE LK LL +++ FL+DCVG +VE+        S+ILLE
Sbjct: 62  LISHCGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLE 121

Query: 109 NLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEG 168
           NLRF++EEEGKGV+A G KVKA+ EDV+KF+  L KL D+++NDAFGTAHRAHSSM+G  
Sbjct: 122 NLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSMVGVK 181

Query: 169 FEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGM 228
              +ASGFL+KKEL+YFSKAL+NP++P LAILGGAKV+DKIQLI+NLLDKV+ MIIGGGM
Sbjct: 182 LNVKASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGM 241

Query: 229 SYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGE 288
           +YTF K L  M IG SL+D  G+KIV +++EKA+  NV++  PVDF  AD F  +A T  
Sbjct: 242 AYTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKF 301

Query: 289 ATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVV 348
            T E G+PD WMGLD GPKS E +K+ I  +K ++WNGP GVFE  NFAKG+   ++ VV
Sbjct: 302 VTDEEGIPDNWMGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVV 361

Query: 349 DVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
           +VT KGAITI+GGGDTA+   + N ++++SHVSTGGGASLELLEGK 
Sbjct: 362 EVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGKE 408
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ... Length = 416 Back     alignment and structure
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A* Length = 415 Back     alignment and structure
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1 Length = 398 Back     alignment and structure
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A* Length = 415 Back     alignment and structure
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} Length = 403 Back     alignment and structure
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A* Length = 394 Back     alignment and structure
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1 Length = 416 Back     alignment and structure
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1 Length = 416 Back     alignment and structure
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A Length = 390 Back     alignment and structure
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii} Length = 410 Back     alignment and structure
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A Length = 395 Back     alignment and structure
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli} Length = 387 Back     alignment and structure
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} Length = 134 Back     alignment and structure
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} Length = 180 Back     alignment and structure
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457 Back     alignment and structure
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457 Back     alignment and structure
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A Length = 118 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} Length = 338 Back     alignment and structure
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 135 Back     alignment and structure
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A Length = 129 Back     alignment and structure
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356 Back     alignment and structure
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356 Back     alignment and structure
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356 Back     alignment and structure
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens} Length = 102 Back     alignment and structure
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens} Length = 157 Back     alignment and structure
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1 Length = 135 Back     alignment and structure
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280 Back     alignment and structure
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280 Back     alignment and structure
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ... Length = 107 Back     alignment and structure
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1 Length = 113 Back     alignment and structure
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A Length = 128 Back     alignment and structure
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A Length = 144 Back     alignment and structure
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} PDB: 1pbk_A* Length = 119 Back     alignment and structure
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia} Length = 130 Back     alignment and structure
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 Back     alignment and structure
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens} Length = 125 Back     alignment and structure
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 1euv_B 3v60_A 3v61_A 3v62_A* Length = 209 Back     alignment and structure
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* Length = 133 Back     alignment and structure
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A* Length = 213 Back     alignment and structure
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A Length = 129 Back     alignment and structure
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A Length = 224 Back     alignment and structure
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} Length = 219 Back     alignment and structure
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1 Length = 167 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query528
3oz7_A417 Phosphoglycerate kinase; transferase, ATP binding, 100.0
1vpe_A398 Phosphoglycerate kinase; transferase, hyperthermos 100.0
1php_A394 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobac 100.0
2wzb_A416 Phosphoglycerate kinase 1; hereditary hemolytic an 100.0
1qpg_A415 PGK, 3-phosphoglycerate kinase; phosphotransferase 100.0
16pk_A415 PGK, 3-phosphoglycerate kinase; ternary complex, g 100.0
1v6s_A390 Phosphoglycerate kinase; riken structu genomics/pr 100.0
3q3v_A403 Phosphoglycerate kinase; structural genomics, cent 100.0
4fey_A395 Phosphoglycerate kinase; structural genomics, niai 100.0
1zmr_A387 Phosphoglycerate kinase; transferase, glycolysis; 100.0
2cun_A410 Phosphoglycerate kinase; structural genomics, tanp 100.0
1fw8_A416 PGK P72, phosphoglycerate kinase; phosphotransfera 100.0
1jvw_A167 Macrophage infectivity potentiator; chagas disease 99.87
2lgo_A130 FKBP; infectious disease, isomerase, giardiasis, s 99.87
3b7x_A134 FK506-binding protein 6; isomerase, repeat, rotama 99.87
1yat_A113 FK506 binding protein; HET: FK5; 2.50A {Saccharomy 99.86
3o5e_A144 Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 99.86
2ppn_A107 FK506-binding protein 1A; high resolution protein 99.86
3o5q_A128 Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 99.86
2y78_A133 Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, 99.86
3kz7_A119 FK506-binding protein 3; FKPB ppiase rapamycin, is 99.86
4dip_A125 Peptidyl-prolyl CIS-trans isomerase FKBP14; struct 99.85
1r9h_A135 FKB-6, FK506 binding protein family; structural ge 99.84
2vn1_A129 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR 99.84
3uf8_A209 Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- 99.84
2lkn_A165 AH receptor-interacting protein; FKBP-type domain, 99.84
2f4e_A180 ATFKBP42; FKBP-like, alpha-beta, signaling protein 99.83
2pbc_A102 FK506-binding protein 2; endoplasmic reticulum, is 99.83
1fd9_A213 Protein (macrophage infectivity potentiator prote; 99.83
3oe2_A219 Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, 99.83
1u79_A129 FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T 99.82
2awg_A118 38 kDa FK-506 binding protein; FKBP-type, ppiase, 99.82
2jwx_A157 FKBP38NTD, FK506-binding protein 8 variant; apopto 99.81
1q6h_A224 FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; 99.8
2d9f_A135 FK506-binding protein 8 variant; FKBP, rapamycin, 99.79
1q1c_A280 FK506-binding protein 4; rotamase, TPR repeat, nuc 99.77
1kt0_A 457 FKBP51, 51 kDa FK506-binding protein; FKBP-like pp 99.74
2if4_A 338 ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, 99.71
3jxv_A356 70 kDa peptidyl-prolyl isomerase; FKBP- binding do 99.7
3jxv_A 356 70 kDa peptidyl-prolyl isomerase; FKBP- binding do 99.7
1fw8_A416 PGK P72, phosphoglycerate kinase; phosphotransfera 99.68
1q1c_A280 FK506-binding protein 4; rotamase, TPR repeat, nuc 99.61
1hxv_A113 Trigger factor; FKBP fold, ppiase, chaperone; NMR 99.55
3prb_A231 FKBP-type peptidyl-prolyl CIS-trans isomerase; cha 99.47
2k8i_A171 SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, 99.45
1p5q_A 336 FKBP52, FK506-binding protein 4; isomerase; 2.80A 99.44
4dt4_A169 FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; 99.41
1ix5_A151 FKBP; ppiase, isomerase; NMR {Methanothermococcust 99.4
2kr7_A151 FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; 99.39
3pr9_A157 FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB 99.37
2kfw_A196 FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD 99.34
3cgm_A158 SLYD, peptidyl-prolyl CIS-trans isomerase; chapero 99.19
1w26_A 432 Trigger factor, TF; chaperone, protein folding, ri 99.06
1kt0_A 457 FKBP51, 51 kDa FK506-binding protein; FKBP-like pp 98.88
1t11_A 392 Trigger factor, TF; helix-turn-helix, four-helix-b 98.82
3gty_X 433 Trigger factor, TF; chaperone-client complex, cell 97.03
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A Back     alignment and structure
Probab=100.00  E-value=9.1e-138  Score=1079.56  Aligned_cols=398  Identities=59%  Similarity=0.954  Sum_probs=383.8

Q ss_pred             CCccccccc-ccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHH
Q psy8371           3 LNKLSVDLL-NLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAE   71 (528)
Q Consensus         3 ~~~~ti~d~-~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~   71 (528)
                      |+++||+|+ |++|||||||||||||+++          +++|||+||+++|||.||||||||||+|++++++||+|||+
T Consensus         5 ~~~~ti~d~~dl~gKrVlvRvD~NVP~~~g~Itdd~RI~aalpTI~~ll~~gak~Vil~SHlGRP~g~~~~~~SL~pva~   84 (417)
T 3oz7_A            5 GNKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLRNEKYTLKPVAE   84 (417)
T ss_dssp             TTCCBGGGCSCCTTCEEEEECCCCCCEETTEESCCHHHHTTHHHHHHHHHHTCSEEEEECCCSCCTTSCCGGGCSHHHHH
T ss_pred             ccCCchhHhhccCCCEEEEEeccCCCccCCcCCChHHHHHHHHHHHHHHHCCCCEEEEEecCCCCCCCCCCccCHHHHHH
Confidence            578999999 9999999999999999964          99999999999999878999999999998889999999999


Q ss_pred             HHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEEe
Q psy8371          72 ELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVN  151 (528)
Q Consensus        72 ~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyVn  151 (528)
                      +|+++||++|+|++||+|+++++++++|++|||+||||||||+||+.++.|++++++|.+|++++.|+++||+|||+|||
T Consensus        85 ~L~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLEN~RF~~eE~~~~~~~~~~~~k~~~~n~~~fa~~LA~l~DvyVN  164 (417)
T 3oz7_A           85 TLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFIN  164 (417)
T ss_dssp             HHHHHHTSCCEEESCSSSHHHHHHHHHSCTTEEEEECCGGGSHHHHSEEECTTSCEEECCHHHHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHhCCCcEECCCCCCHHHHHHHhcCCCCcEEEEccccccccccccccccccccccCChhhhHHHHHHHHhhCCEEEE
Confidence            99999999999999999999999999999999999999999999998766777889999999999999999999999999


Q ss_pred             cccccccccCcccccccccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHHHHH
Q psy8371         152 DAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYT  231 (528)
Q Consensus       152 DAF~~aHR~haS~~g~~~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~ma~t  231 (528)
                      ||||||||+||||+||+++|+||||||+|||++|++++++|+|||+||+|||||||||++|+||+++||+|||||+||||
T Consensus       165 DAFgtaHRahaS~~Gi~~~~~~aG~LmekEl~~l~kal~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~t  244 (417)
T 3oz7_A          165 DAFGTAHRAHSSMVGVKLNVKASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGMAYT  244 (417)
T ss_dssp             CCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHTSCCSSEEEEEECSCSTTSHHHHHHHHTTCSEEEEETTHHHH
T ss_pred             CcchhhhhccCcccccccccccccHHHHHHHHHHHHHHcCCCCceEEEEeCccHHHHHHHHHHHHHhcCEEEeccHHHHH
Confidence            99999999999999999767999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCCCCCCCcccccChhHHHH
Q psy8371         232 FLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSREL  311 (528)
Q Consensus       232 Fl~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~~  311 (528)
                      ||+|.||++||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+++..++||+|||+|||||+|++.
T Consensus       245 Fl~A~~G~~iG~Sl~e~d~~~~a~~il~~a~~~g~~i~LPvD~vva~~f~~~a~~~~~~~~~~Ip~~~m~lDiGp~T~~~  324 (417)
T 3oz7_A          245 FKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPKSIEN  324 (417)
T ss_dssp             HHHHHHCCCBTTSCCCTTTHHHHHHHHHHHHHTTCEEECCSEEEEESSSSTTSCEEEEESSSCBCTTCEEEEECHHHHHH
T ss_pred             HHHHHcCCccCchhcCccChHHHHHHHHHHHHcCCEEECCceeEEeecccCCCCeEEecccccCCCCCeeeecCHHHHHH
Confidence            99985699999999999999999999999999999999999999999999999988873236899999999999999999


Q ss_pred             HHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcchhhh
Q psy8371         312 FKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELL  391 (528)
Q Consensus       312 ~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~le~L  391 (528)
                      |+++|++|+||||||||||||+++|+.||++++++++++++++++||+|||||++|++++|+.++++|+||||||+|++|
T Consensus       325 ~~~~i~~akTIvWNGP~GvFE~~~Fa~GT~~va~aia~~t~~~a~sIvGGGDt~aav~~~g~~d~~shiSTGGGA~Le~L  404 (417)
T 3oz7_A          325 YKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELL  404 (417)
T ss_dssp             HHHHHHTCSEEEEESCSBCTTSSTTTHHHHHHHHHHHHHHHHTCEEEECSHHHHHHHHHTTCGGGSSEECSCSHHHHHHH
T ss_pred             HHHHHHhCCEEEEECCCccccccchhHHHHHHHHHHHhhccCCCEEEEcCcHHHHHHHHcCCcCCccEEcCChHHHHHHH
Confidence            99999999999999999999999999999999999999887789999999999999999999999999999999999999


Q ss_pred             hhhccccCC
Q psy8371         392 EGKIKEKGF  400 (528)
Q Consensus       392 ~~k~Lp~g~  400 (528)
                      +||.||+..
T Consensus       405 eGk~LPgv~  413 (417)
T 3oz7_A          405 EGKELPGVL  413 (417)
T ss_dssp             TTCCCHHHH
T ss_pred             cCCCCccee
Confidence            999999865
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1 Back     alignment and structure
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A* Back     alignment and structure
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ... Back     alignment and structure
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A* Back     alignment and structure
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A* Back     alignment and structure
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A Back     alignment and structure
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0 Back     alignment and structure
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A Back     alignment and structure
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli} Back     alignment and structure
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii} Back     alignment and structure
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1 Back     alignment and structure
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1 Back     alignment and structure
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia} Back     alignment and structure
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} Back     alignment and structure
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1 Back     alignment and structure
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A Back     alignment and structure
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ... Back     alignment and structure
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A Back     alignment and structure
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* Back     alignment and structure
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A* Back     alignment and structure
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens} Back     alignment and structure
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1 Back     alignment and structure
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A Back     alignment and structure
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A* Back     alignment and structure
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens} Back     alignment and structure
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} Back     alignment and structure
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens} Back     alignment and structure
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A* Back     alignment and structure
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0 Back     alignment and structure
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A Back     alignment and structure
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A Back     alignment and structure
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens} Back     alignment and structure
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A Back     alignment and structure
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Back     alignment and structure
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Back     alignment and structure
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} Back     alignment and structure
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Back     alignment and structure
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Back     alignment and structure
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1 Back     alignment and structure
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Back     alignment and structure
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1 Back     alignment and structure
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A Back     alignment and structure
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli} Back     alignment and structure
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Back     alignment and structure
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli} Back     alignment and structure
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1 Back     alignment and structure
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori} Back     alignment and structure
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A Back     alignment and structure
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli} Back     alignment and structure
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A* Back     alignment and structure
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5 Back     alignment and structure
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Back     alignment and structure
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A Back     alignment and structure
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 528
d1ltka_417 c.86.1.1 (A:) Phosphoglycerate kinase {Malaria par 1e-132
d1hdia_413 c.86.1.1 (A:) Phosphoglycerate kinase {Pig (Sus sc 1e-132
d1qpga_415 c.86.1.1 (A:) Phosphoglycerate kinase {Baker's yea 1e-132
d1phpa_394 c.86.1.1 (A:) Phosphoglycerate kinase {Bacillus st 1e-120
d1vpea_398 c.86.1.1 (A:) Phosphoglycerate kinase {Thermotoga 1e-112
d1v6sa_390 c.86.1.1 (A:) Phosphoglycerate kinase {Thermus the 8e-97
d16pka_415 c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma 2e-89
d1r9ha_118 d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabd 3e-10
d1q1ca1120 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Hu 8e-10
d1yata_113 d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeas 1e-09
d1kt1a2111 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Mo 3e-08
d1kt1a3115 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {M 4e-08
d1q1ca2117 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {H 5e-08
d1u79a_125 d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis tha 6e-08
d2ppna1107 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12) 1e-07
d1jvwa_160 d.26.1.1 (A:) Macrophage infectivity potentiator p 6e-07
d1pbka_116 d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9e-07
d1fd9a_204 d.26.1.1 (A:) Macrophage infectivity potentiator p 1e-06
d1q6ha_210 d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase 1e-05
>d1ltka_ c.86.1.1 (A:) Phosphoglycerate kinase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 417 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphoglycerate kinase
superfamily: Phosphoglycerate kinase
family: Phosphoglycerate kinase
domain: Phosphoglycerate kinase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  389 bits (1001), Expect = e-132
 Identities = 237/403 (58%), Positives = 304/403 (75%), Gaps = 11/403 (2%)

Query: 4   NKLSV-DLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSH 52
           NKLS+ DL ++  K+VL+RVDFNVP++           A L TI +   +GA  ++L+SH
Sbjct: 6   NKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISH 65

Query: 53  LGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
            GRPDG +N KY+LKPVAE LK LL +++ FL+DCVG +VE+        S+ILLENLRF
Sbjct: 66  CGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRF 125

Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
           ++EEEGKGV+A G KVKA+ EDV+KF+  L KL D+++NDAFGTAHRAHSSM+G     +
Sbjct: 126 HIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSMVGVKLNVK 185

Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
           ASGFL+KKEL+YFSKAL+NP++P LAILGGAKV+DKIQLI+NLLDKV+ MIIGGGM+YTF
Sbjct: 186 ASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGMAYTF 245

Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
            K L  M IG SL+D  G+KIV +++EKA+  NV++  PVDF  AD F  +A T   T E
Sbjct: 246 KKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDE 305

Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTT 352
            G+PD WMGLD GPKS E +K+ I  +K ++WNGP GVFE  NFAKG+   ++ VV+VT 
Sbjct: 306 EGIPDNWMGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTK 365

Query: 353 KGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
           KGAITI+GGGDTA+   + N ++++SHVSTGGGASLELLEGK 
Sbjct: 366 KGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGKE 408
>d1hdia_ c.86.1.1 (A:) Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: 9823]} Length = 413 Back     information, alignment and structure
>d1qpga_ c.86.1.1 (A:) Phosphoglycerate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 415 Back     information, alignment and structure
>d1phpa_ c.86.1.1 (A:) Phosphoglycerate kinase {Bacillus stearothermophilus [TaxId: 1422]} Length = 394 Back     information, alignment and structure
>d1vpea_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermotoga maritima [TaxId: 2336]} Length = 398 Back     information, alignment and structure
>d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus [TaxId: 274]} Length = 390 Back     information, alignment and structure
>d16pka_ c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma brucei [TaxId: 5691]} Length = 415 Back     information, alignment and structure
>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]} Length = 118 Back     information, alignment and structure
>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 120 Back     information, alignment and structure
>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 113 Back     information, alignment and structure
>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 111 Back     information, alignment and structure
>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 115 Back     information, alignment and structure
>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 117 Back     information, alignment and structure
>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 125 Back     information, alignment and structure
>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]} Length = 160 Back     information, alignment and structure
>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]} Length = 204 Back     information, alignment and structure
>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]} Length = 210 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query528
d1ltka_417 Phosphoglycerate kinase {Malaria parasite (Plasmod 100.0
d1qpga_415 Phosphoglycerate kinase {Baker's yeast (Saccharomy 100.0
d1hdia_413 Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: 100.0
d1phpa_394 Phosphoglycerate kinase {Bacillus stearothermophil 100.0
d1v6sa_390 Phosphoglycerate kinase {Thermus thermophilus [Tax 100.0
d1vpea_398 Phosphoglycerate kinase {Thermotoga maritima [TaxI 100.0
d16pka_415 Phosphoglycerate kinase {Trypanosoma brucei [TaxId 100.0
d1r9ha_118 FKB-6, N-terminal domain {Caenorhabditis elegans [ 99.89
d2ppna1107 FK-506 binding protein (FKBP12), an immunophilin { 99.89
d1q1ca1120 FKBP52, N-terminal domains {Human (Homo sapiens) [ 99.89
d1yata_113 Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc 99.89
d1fd9a_204 Macrophage infectivity potentiator protein (MIP) { 99.88
d1kt1a2111 FKBP51, N-terminal domains {Monkey (Saimiri bolivi 99.88
d1q6ha_210 Peptidyl-prolyl cis-trans isomerase FkpA {Escheric 99.87
d1pbka_116 FKBP25 {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1jvwa_160 Macrophage infectivity potentiator protein (MIP) { 99.85
d1u79a_125 FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 99.85
d1kt1a3115 FKBP51, N-terminal domains {Monkey (Saimiri bolivi 99.8
d1q1ca2117 FKBP52, N-terminal domains {Human (Homo sapiens) [ 99.74
d1ix5a_151 Archaeal FKBP {Archaeon Methanococcus thermolithot 99.39
d1hxva_85 Trigger factor PPIase domain {Mycoplasma genitaliu 99.3
d1l1pa_106 Trigger factor PPIase domain {Escherichia coli [Ta 98.57
d1t11a3113 Trigger factor PPIase domain {Vibrio cholerae [Tax 98.42
>d1ltka_ c.86.1.1 (A:) Phosphoglycerate kinase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglycerate kinase
superfamily: Phosphoglycerate kinase
family: Phosphoglycerate kinase
domain: Phosphoglycerate kinase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1e-123  Score=985.41  Aligned_cols=398  Identities=59%  Similarity=0.958  Sum_probs=375.0

Q ss_pred             Cccccccc-ccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHH
Q psy8371           4 NKLSVDLL-NLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEE   72 (528)
Q Consensus         4 ~~~ti~d~-~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~   72 (528)
                      +++||+|+ |++|||||||||||||+++          +++|||+||+++||++|||+||||||+|++++++||+|||++
T Consensus         6 n~~ti~d~~d~~gK~VllRvD~NvPi~~g~i~dd~RI~~~~pTI~~l~~~~a~kvil~sH~GRP~g~~~~~~SL~~~a~~   85 (417)
T d1ltka_           6 NKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLRNEKYTLKPVAET   85 (417)
T ss_dssp             SCCBSSSCCCCTTCEEEEEECCCCCEETTEESCTHHHHHTHHHHHHHHTTCCSEEEEECCCSCCTTSCCGGGCSHHHHHH
T ss_pred             cCcccccccccCCCEEEEEeccCCcccCCeECcHHHHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCCCCCcCHHHHHHH
Confidence            68999999 8999999999999999975          999999999999994499999999999988899999999999


Q ss_pred             HHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEEec
Q psy8371          73 LKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVND  152 (528)
Q Consensus        73 L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyVnD  152 (528)
                      |+++|+++|.|++||+|+.++++++.|++|+|+||||+|||+||+.+..+++..+.+.+.++++.|+++||+|||+||||
T Consensus        86 L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~IlLLENvRF~~eE~~~~~~~~~~~~~~~~~n~~~f~k~LA~laDvyVND  165 (417)
T d1ltka_          86 LKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFIND  165 (417)
T ss_dssp             HHHHHTSCCEECSCSSSHHHHHHHHSSCTTEEEECCCGGGSHHHHSEEECTTCCEEECCHHHHHHHHHHHHTSCSEEEEE
T ss_pred             HHHHhCccccccccccchhhhhhhccCCcccEEEecceeccccccccccccccchhccchhhHHHHHHHHhhcCcEEEec
Confidence            99999999999999999999999999999999999999999999876444444455667788899999999999999999


Q ss_pred             ccccccccCcccccccccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHHHHHH
Q psy8371         153 AFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF  232 (528)
Q Consensus       153 AF~~aHR~haS~~g~~~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~ma~tF  232 (528)
                      |||||||+|||++||+..++++|+||++|+.+|++++++|+||++||+||||++|||++|+||+++||+|++||+|||||
T Consensus       166 AF~~aHR~haS~vgi~~~~~~aG~L~ekEl~~L~~~l~~~~kP~vaIlGGaKvsdKi~vi~~L~~k~D~iiigG~mantf  245 (417)
T d1ltka_         166 AFGTAHRAHSSMVGVKLNVKASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGMAYTF  245 (417)
T ss_dssp             CTTSCSSCCHHHHCCCCSEEEECHHHHHHHHHHHHHHTSCCSSEEEEEECSCSGGGHHHHHHHHTTCSEEEEESSHHHHH
T ss_pred             chhhhhccCcchhhhhhccchhhHHHHHHHHHHHHHHhccccCceEEEecCCccchHHHHHHHHhhhceeeeehhhHHHH
Confidence            99999999999999985567899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCCCCCCCcccccChhHHHHH
Q psy8371         233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSRELF  312 (528)
Q Consensus       233 l~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~~~  312 (528)
                      |++++|++||+|++|++..+.|++++++|++++++|+||+|++|+++++.+.+...+....+||++||++||||+|++.|
T Consensus       246 L~~a~g~~ig~sl~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~i~DIGp~Ti~~~  325 (417)
T d1ltka_         246 KKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPKSIENY  325 (417)
T ss_dssp             HHHHHCCCCTTSCCCTTGGGTHHHHHHHHHHTTCEEECCSEEEEESSSSSSSCEEEEETTTCCCTTCEEEEECHHHHHHH
T ss_pred             HHhccCCccCcccchhhHHHHHHHHHHHHHhcCCceeeccceeeecccccCcccccccccccCCccceeeeccchhhhHH
Confidence            99559999999999999999999999999999999999999999998877776665554567999999999999999999


Q ss_pred             HHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcchhhhh
Q psy8371         313 KEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLE  392 (528)
Q Consensus       313 ~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~le~L~  392 (528)
                      +++|++|+|||||||||+||.++|+.||++|++++++.++++++||+|||||++|++++|+.++|+|+||||||+|+||+
T Consensus       326 ~~~I~~aktI~WNGP~GvfE~~~F~~GT~~l~~~i~~~t~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~Le~L~  405 (417)
T d1ltka_         326 KDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELLE  405 (417)
T ss_dssp             HHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECCSTTHHHHHHHTCGGGSSEECCCSHHHHHHHT
T ss_pred             HHHhccCCEEEEECCcccccccchhHHHHHHHHHHHHHhhCCCEEEEeCHHHHHHHHhcCCccCCeEEEcCHHHHHHHHC
Confidence            99999999999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             hhccccCCC
Q psy8371         393 GKIKEKGFG  401 (528)
Q Consensus       393 ~k~Lp~g~G  401 (528)
                      |+.||+.+.
T Consensus       406 G~~LPgiea  414 (417)
T d1ltka_         406 GKELPGVLA  414 (417)
T ss_dssp             TCCCHHHHT
T ss_pred             CCCCcceec
Confidence            999998753
>d1qpga_ c.86.1.1 (A:) Phosphoglycerate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hdia_ c.86.1.1 (A:) Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1phpa_ c.86.1.1 (A:) Phosphoglycerate kinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vpea_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d16pka_ c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]} Back     information, alignment and structure
>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]} Back     information, alignment and structure
>d1l1pa_ d.26.1.1 (A:) Trigger factor PPIase domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1t11a3 d.26.1.1 (A:135-247) Trigger factor PPIase domain {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure