Psyllid ID: psy8482


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
MLIRTNMEDMREKTHCRHYELYRKKRLEEVRDMLKHRHNRTNMEDMREKTHCRHYELYRKKRLEELHAKFDKLKKDHADEKKRLEDARKKLEEDLLEFNRRKQQMATMSGSHTLTLGKSKKK
cccccHHHHHHHHHcHHHHHHHHHHHHHHcHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
ccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
mlirtnmedmrEKTHCRHYELYRKKRLEEVRDMLKHRhnrtnmedmreKTHCRHYELYRKKRLEELHAKFDKLKKDHADEKKRLEDARKKLEEDLLEFNRRKQQmatmsgshtltlgkskkk
mlirtnmedmrekthcrhyelyRKKRLEEVRDMLKhrhnrtnmedmrekthcrHYELYRKKRLEELHAKfdklkkdhadekkRLEDARKKLEEDLLEFnrrkqqmatmsgshtltlgkskkk
MLIRTNMEDMREKTHCRHYELYRKKRLEEVRDMLKHRHNRTNMEDMREKTHCRHYELYRKKRLEELHAKFDKLKKDHADEKKRLEDARKKLEEDLLEFNRRKQQMATMSGSHTLTLGKSKKK
***************CRHYELYR****************************CRHYELYRK**************************************************************
MLIRTNMEDMREKTHCRHYELYRKKR************************************************************************************************
*************THCRHYELYRKKRLEEVRDMLKHRHNRTNMEDMREKTHCRHYELYRKKRLEELHAKFDKLKKDHADEKKRLEDARKKLEEDLLEFNRRKQ*******************
MLIRTNMEDMREKTHCRHYELYRKKRLEEVRDMLKHRHNRTNMEDMREKTHCRHYELYRKKRLEELHAKFDKLKKDHADEKKRLEDARKKLEEDLLEFNRRKQQ******************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLIRTNMEDMREKTHCRHYELYRKKRLEEVRDMLKHRHNRTNMEDMREKTHCRHYELYRKKRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSGSHTLTLGKSKKK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query122 2.2.26 [Sep-21-2011]
P54359419 Septin-2 OS=Drosophila me yes N/A 0.983 0.286 0.520 5e-25
Q6IRQ5427 Septin-8-B OS=Xenopus lae N/A N/A 0.868 0.248 0.378 2e-12
Q6AXA6427 Septin-8-A OS=Xenopus lae N/A N/A 0.983 0.281 0.374 4e-12
B1H120427 Septin-8 OS=Xenopus tropi yes N/A 0.942 0.269 0.368 9e-12
A4FUM1423 Septin-8-B OS=Danio rerio yes N/A 0.975 0.281 0.385 7e-11
Q8C650452 Septin-10 OS=Mus musculus yes N/A 0.983 0.265 0.328 3e-10
Q642H3420 Septin-8-A OS=Danio rerio no N/A 0.959 0.278 0.394 1e-09
Q5PQK1456 Septin-10 OS=Rattus norve yes N/A 0.975 0.260 0.333 7e-09
Q92599483 Septin-8 OS=Homo sapiens yes N/A 0.827 0.209 0.350 2e-07
B5FW69442 Septin-8 OS=Otolemur garn N/A N/A 0.827 0.228 0.350 2e-07
>sp|P54359|SEPT2_DROME Septin-2 OS=Drosophila melanogaster GN=Sep2 PE=2 SV=2 Back     alignment and function desciption
 Score =  112 bits (281), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/144 (52%), Positives = 93/144 (64%), Gaps = 24/144 (16%)

Query: 1   MLIRTNMEDMREKTHCRHYELYRKKRLEEVRDMLKHRHNRT-NMEDMREKTHCRHY-ELY 58
           MLIRTNMEDMREKTH RHYELYR+KRLE++        N+  + +   E     H  EL 
Sbjct: 278 MLIRTNMEDMREKTHTRHYELYRQKRLEQMGFSDVDSDNKPISFQQTFEAKRSNHLAELQ 337

Query: 59  RK---------KRLEE-----------LHAKFDKLKKDHADEKKRLEDARKKLEEDLLEF 98
            K         +R++E           LHAKF+KLK+DHA+EK++LE++RK LEED L+F
Sbjct: 338 SKEEEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHAEEKRKLEESRKALEEDYLDF 397

Query: 99  NRRKQQMATMSGSHTLTLGKSKKK 122
            RRKQQ+AT    HTLTLGKSKKK
Sbjct: 398 QRRKQQLAT--AHHTLTLGKSKKK 419




Involved in cytokinesis.
Drosophila melanogaster (taxid: 7227)
>sp|Q6IRQ5|SEP8B_XENLA Septin-8-B OS=Xenopus laevis GN=sept8-b PE=2 SV=1 Back     alignment and function description
>sp|Q6AXA6|SEP8A_XENLA Septin-8-A OS=Xenopus laevis GN=sept8-a PE=2 SV=1 Back     alignment and function description
>sp|B1H120|SEPT8_XENTR Septin-8 OS=Xenopus tropicalis GN=sept8 PE=2 SV=1 Back     alignment and function description
>sp|A4FUM1|SEP8B_DANRE Septin-8-B OS=Danio rerio GN=sept8b PE=2 SV=1 Back     alignment and function description
>sp|Q8C650|SEP10_MOUSE Septin-10 OS=Mus musculus GN=Sept10 PE=2 SV=1 Back     alignment and function description
>sp|Q642H3|SEP8A_DANRE Septin-8-A OS=Danio rerio GN=sept8a PE=2 SV=2 Back     alignment and function description
>sp|Q5PQK1|SEP10_RAT Septin-10 OS=Rattus norvegicus GN=Sept10 PE=1 SV=1 Back     alignment and function description
>sp|Q92599|SEPT8_HUMAN Septin-8 OS=Homo sapiens GN=SEPT8 PE=1 SV=4 Back     alignment and function description
>sp|B5FW69|SEPT8_OTOGA Septin-8 OS=Otolemur garnettii GN=SEPT8 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
383855620 421 PREDICTED: septin-2-like [Megachile rotu 1.0 0.289 0.527 2e-26
312384986 419 hypothetical protein AND_01293 [Anophele 0.983 0.286 0.548 8e-26
345481239 325 PREDICTED: septin-2-like [Nasonia vitrip 1.0 0.375 0.531 2e-25
158288111 421 AGAP011532-PA [Anopheles gambiae str. PE 0.975 0.282 0.541 3e-25
157106952 391 septin [Aedes aegypti] gi|108879693|gb|E 0.983 0.306 0.534 4e-25
170068424 417 septin [Culex quinquefasciatus] gi|16786 0.975 0.285 0.527 9e-25
170072344 442 conserved hypothetical protein [Culex qu 0.975 0.269 0.527 1e-24
289740583 418 septin [Glossina morsitans morsitans] 0.983 0.287 0.520 1e-23
194744154 419 GF18330 [Drosophila ananassae] gi|190627 0.983 0.286 0.520 2e-23
125773073 419 GA18006 [Drosophila pseudoobscura pseudo 0.983 0.286 0.520 2e-23
>gi|383855620|ref|XP_003703308.1| PREDICTED: septin-2-like [Megachile rotundata] Back     alignment and taxonomy information
 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/144 (52%), Positives = 93/144 (64%), Gaps = 22/144 (15%)

Query: 1   MLIRTNMEDMREKTHCRHYELYRKKRLEEVRDMLKHRHNRT-------------NMEDMR 47
           MLIRTNMEDMREKTHCRHYELYR+KRLE++        N+              ++++++
Sbjct: 278 MLIRTNMEDMREKTHCRHYELYRRKRLEQMGFSDVDSENKPVSFQQTCEAKRSIHLQELQ 337

Query: 48  EK-THCRHYELYRKKRLE--------ELHAKFDKLKKDHADEKKRLEDARKKLEEDLLEF 98
           +K    R   + R K  E        ELH KFDKLKKDH +EKK+LE+ RKKLE+D+LEF
Sbjct: 338 QKEDEMRQMFVVRVKEAEAGLKEAEKELHNKFDKLKKDHTEEKKKLEENRKKLEDDILEF 397

Query: 99  NRRKQQMATMSGSHTLTLGKSKKK 122
           NRRK Q A     HTLTLGKSKKK
Sbjct: 398 NRRKTQFAQQPQHHTLTLGKSKKK 421




Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312384986|gb|EFR29583.1| hypothetical protein AND_01293 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|345481239|ref|XP_001602579.2| PREDICTED: septin-2-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|158288111|ref|XP_309977.3| AGAP011532-PA [Anopheles gambiae str. PEST] gi|157019317|gb|EAA05701.3| AGAP011532-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|157106952|ref|XP_001649557.1| septin [Aedes aegypti] gi|108879693|gb|EAT43918.1| AAEL004668-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|170068424|ref|XP_001868862.1| septin [Culex quinquefasciatus] gi|167864444|gb|EDS27827.1| septin [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|170072344|ref|XP_001870157.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167868598|gb|EDS31981.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|289740583|gb|ADD19039.1| septin [Glossina morsitans morsitans] Back     alignment and taxonomy information
>gi|194744154|ref|XP_001954560.1| GF18330 [Drosophila ananassae] gi|190627597|gb|EDV43121.1| GF18330 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|125773073|ref|XP_001357795.1| GA18006 [Drosophila pseudoobscura pseudoobscura] gi|195158913|ref|XP_002020328.1| GL13925 [Drosophila persimilis] gi|54637528|gb|EAL26930.1| GA18006 [Drosophila pseudoobscura pseudoobscura] gi|194117097|gb|EDW39140.1| GL13925 [Drosophila persimilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
FB|FBgn0014029419 Sep2 "Septin 2" [Drosophila me 0.631 0.183 0.555 2.8e-17
RGD|1585082419 Sept6 "septin 6" [Rattus norve 1.0 0.291 0.390 6e-17
MGI|MGI:1888939434 Sept6 "septin 6" [Mus musculus 0.991 0.278 0.386 1.8e-16
UNIPROTKB|F1LRN3417 Sept6 "Protein Sept6" [Rattus 0.991 0.290 0.386 2.1e-16
UNIPROTKB|F1LSM9424 Sept6 "Protein Sept6" [Rattus 0.991 0.285 0.386 2.2e-16
ZFIN|ZDB-GENE-030131-1414432 sept6 "septin 6" [Danio rerio 0.991 0.280 0.38 8.3e-16
FB|FBgn0026361422 Sep5 "Septin 5" [Drosophila me 0.5 0.144 0.587 4.4e-14
ZFIN|ZDB-GENE-030131-309420 sept8a "septin 8a" [Danio reri 0.803 0.233 0.392 6.4e-11
UNIPROTKB|H0Y961160 SEPT11 "Septin-11" [Homo sapie 0.803 0.612 0.370 2e-10
UNIPROTKB|B4E049369 SEPT6 "cDNA FLJ59646, highly s 0.811 0.268 0.390 2.2e-10
FB|FBgn0014029 Sep2 "Septin 2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 217 (81.4 bits), Expect = 2.8e-17, P = 2.8e-17
 Identities = 45/81 (55%), Positives = 61/81 (75%)

Query:    44 EDMREK--THCRHYELYRKKRLEELHAKFDKLKKDHADEKKRLEDARKKLEEDLLEFNRR 101
             E++R+      +  E   K+  ++LHAKF+KLK+DHA+EK++LE++RK LEED L+F RR
Sbjct:   341 EEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHAEEKRKLEESRKALEEDYLDFQRR 400

Query:   102 KQQMATMSGSHTLTLGKSKKK 122
             KQQ+AT    HTLTLGKSKKK
Sbjct:   401 KQQLAT--AHHTLTLGKSKKK 419


GO:0005525 "GTP binding" evidence=ISS
GO:0003924 "GTPase activity" evidence=IDA;NAS
GO:0000910 "cytokinesis" evidence=ISS;IMP;NAS
GO:0005940 "septin ring" evidence=ISS
GO:0045172 "germline ring canal" evidence=NAS
GO:0005515 "protein binding" evidence=IPI
GO:0007349 "cellularization" evidence=TAS
GO:0007049 "cell cycle" evidence=IEA
GO:0005875 "microtubule associated complex" evidence=IDA
GO:0031105 "septin complex" evidence=IDA
GO:0006184 "GTP catabolic process" evidence=IDA
GO:0022008 "neurogenesis" evidence=IMP
RGD|1585082 Sept6 "septin 6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1888939 Sept6 "septin 6" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1LRN3 Sept6 "Protein Sept6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LSM9 Sept6 "Protein Sept6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-1414 sept6 "septin 6" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0026361 Sep5 "Septin 5" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-309 sept8a "septin 8a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y961 SEPT11 "Septin-11" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B4E049 SEPT6 "cDNA FLJ59646, highly similar to Septin-6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P54359SEPT2_DROMENo assigned EC number0.52080.98360.2863yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
cd01850275 cd01850, CDC_Septin, CDC/Septin GTPase family 2e-07
cd01850275 cd01850, CDC_Septin, CDC/Septin GTPase family 2e-05
COG5019373 COG5019, CDC3, Septin family protein [Cell divisio 2e-05
pfam00735280 pfam00735, Septin, Septin 1e-04
pfam00735280 pfam00735, Septin, Septin 0.002
>gnl|CDD|206649 cd01850, CDC_Septin, CDC/Septin GTPase family Back     alignment and domain information
 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 15/30 (50%), Positives = 24/30 (80%)

Query: 1   MLIRTNMEDMREKTHCRHYELYRKKRLEEV 30
           +LIRT+++D++E TH  HYE YR ++LE +
Sbjct: 245 LLIRTHLQDLKETTHNVHYENYRSEKLEAL 274


Septins are a conserved family of GTP-binding proteins associated with diverse processes in dividing and non-dividing cells. They were first discovered in the budding yeast S. cerevisiae as a set of genes (CDC3, CDC10, CDC11 and CDC12) required for normal bud morphology. Septins are also present in metazoan cells, where they are required for cytokinesis in some systems, and implicated in a variety of other processes involving organization of the cell cortex and exocytosis. In humans, 12 septin genes generate dozens of polypeptides, many of which comprise heterooligomeric complexes. Since septin mutants are commonly defective in cytokinesis and formation of the neck formation of the neck filaments/septin rings, septins have been considered to be the primary constituents of the neck filaments. Septins belong to the GTPase superfamily for their conserved GTPase motifs and enzymatic activities. Length = 275

>gnl|CDD|206649 cd01850, CDC_Septin, CDC/Septin GTPase family Back     alignment and domain information
>gnl|CDD|227352 COG5019, CDC3, Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] Back     alignment and domain information
>gnl|CDD|201420 pfam00735, Septin, Septin Back     alignment and domain information
>gnl|CDD|201420 pfam00735, Septin, Septin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 122
KOG3859|consensus406 99.9
KOG2655|consensus366 99.49
COG5019373 CDC3 Septin family protein [Cell division and chro 99.48
KOG1547|consensus336 98.85
KOG3859|consensus406 89.01
>KOG3859|consensus Back     alignment and domain information
Probab=99.90  E-value=2.7e-23  Score=169.04  Aligned_cols=106  Identities=51%  Similarity=0.736  Sum_probs=98.2

Q ss_pred             CcccchhhhhhhhccccchhHHHHhhhhhhh--ccchh-------------hhh----hh-hhHHHHHHHHHHHH--HHH
Q psy8482           1 MLIRTNMEDMREKTHCRHYELYRKKRLEEVR--DMLKH-------------RHN----RT-NMEDMREKTHCRHY--ELY   58 (122)
Q Consensus         1 ~Li~t~~~dL~~~T~~~~yE~yR~~~L~~~~--~~~p~-------------~~~----~~-~EeemrqvF~~kV~--E~k   58 (122)
                      |||||||.||++.||..|||+||+.+|..||  |+||+             |.+    ++ +|++|++.|+++|+  |+.
T Consensus       277 mLirtNmedlReqTHtrhYElyRr~kL~~Mgf~dv~~~~~p~s~qet~eaKr~e~~~e~qrkEee~rqmFvqrvkekE~e  356 (406)
T KOG3859|consen  277 MLIRTNMEDLREQTHTRHYELYRRCKLEEMGFKDVDPDNKPFSLQETYEAKRNEFLGELQRKEEEMRQMFVQRVKEKEAE  356 (406)
T ss_pred             HHccccHHHHhhhccccchHHHHHHHHHHcCCccCCCCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999999999999998  65552             344    46 99999999999999  999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8482          59 RKKRLEELHAKFDKLKKDHADEKKRLEDARKKLEEDLLEFNRRKQQMA  106 (122)
Q Consensus        59 lKe~E~EL~~r~Eelk~~l~~~~~~lEek~r~LEee~~~~e~~k~~~~  106 (122)
                      +++.|.+|+.+++.+++.+.+++++||+++|+|++++.+|...+++.+
T Consensus       357 lke~Ekel~~kf~~lkr~h~eEk~kle~~rr~Leee~~~f~~rk~~~~  404 (406)
T KOG3859|consen  357 LKEAEKELHEKFDRLKRLHQEEKKKLEEKRKQLEEEVNAFQRRKTAAE  404 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999997654



>KOG2655|consensus Back     alignment and domain information
>COG5019 CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] Back     alignment and domain information
>KOG1547|consensus Back     alignment and domain information
>KOG3859|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
2qag_B427 Crystal Structure Of Human Septin Trimer 267 Length 5e-08
>pdb|2QAG|B Chain B, Crystal Structure Of Human Septin Trimer 267 Length = 427 Back     alignment and structure

Iteration: 1

Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 73/150 (48%), Gaps = 43/150 (28%) Query: 1 MLIRTNMEDMREKTHCRHYELYRKKRLEEVRDMLKHRHNRTNMEDMREKTHCRHYELYRK 60 MLIR NMED+RE+TH RHYELYR+ +LEE+ K + ++E YE R Sbjct: 277 MLIRVNMEDLREQTHTRHYELYRRCKLEEMG--FKDTDPDSKPFSLQET-----YEAKRN 329 Query: 61 KRLEEL-----------------------------HAKFDKLKKDHADEKKRLEDARKKL 91 + L EL H KFD+LKK H DEKK+LED +K L Sbjct: 330 EFLGELQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSL 389 Query: 92 EEDLLEFNRRK-------QQMATMSGSHTL 114 ++++ F +RK Q + GS TL Sbjct: 390 DDEVNAFKQRKTAAELLQSQGSQAGGSQTL 419

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
2qag_B427 Septin-6, protein NEDD5; cell cycle, cell division 8e-12
2qag_C418 Septin-7; cell cycle, cell division, GTP-binding, 5e-11
2qag_A361 Septin-2, protein NEDD5; cell cycle, cell division 7e-07
3t5d_A274 Septin-7; GTP-binding protein, cytoskeleton, signa 1e-05
3t5d_A274 Septin-7; GTP-binding protein, cytoskeleton, signa 4e-04
2qnr_A301 Septin-2, protein NEDD5; structural genomics conso 6e-04
2qnr_A301 Septin-2, protein NEDD5; structural genomics conso 8e-04
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Length = 427 Back     alignment and structure
 Score = 59.8 bits (144), Expect = 8e-12
 Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 27/149 (18%)

Query: 1   MLIRTNMEDMREKTHCRHYELYRKKRLEEV--------------------RDMLKHRHNR 40
           MLIR NMED+RE+TH RHYELYR+ +LEE+                    +        +
Sbjct: 277 MLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQ 336

Query: 41  TNMEDMREK--THCRHYELYRKKRLEELHAKFDKLKKDHADEKKRLEDARKKLEEDLLEF 98
              E+MR+      +  E   K+  +ELH KFD+LKK H DEKK+LED +K L++++  F
Sbjct: 337 KKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAF 396

Query: 99  NRRK-----QQMATMSGSHTLTLGKSKKK 122
            +RK      Q        + TL + K+K
Sbjct: 397 KQRKTAAELLQSQGSQAGGSQTLKRDKEK 425


>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Length = 418 Back     alignment and structure
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Length = 361 Back     alignment and structure
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A* Length = 274 Back     alignment and structure
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A* Length = 274 Back     alignment and structure
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A* Length = 301 Back     alignment and structure
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A* Length = 301 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query122
2qag_B427 Septin-6, protein NEDD5; cell cycle, cell division 99.91
2qag_C418 Septin-7; cell cycle, cell division, GTP-binding, 99.88
2qnr_A301 Septin-2, protein NEDD5; structural genomics conso 98.8
2qag_A361 Septin-2, protein NEDD5; cell cycle, cell division 98.69
2qag_C418 Septin-7; cell cycle, cell division, GTP-binding, 88.07
2qag_B427 Septin-6, protein NEDD5; cell cycle, cell division 87.7
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure
Probab=99.91  E-value=2.1e-26  Score=192.71  Aligned_cols=122  Identities=46%  Similarity=0.643  Sum_probs=29.6

Q ss_pred             CcccchhhhhhhhccccchhHHHHhhhhhhhc--cc----h---------hhhh----hh-hhHHHHHHHHHHHH--HHH
Q psy8482           1 MLIRTNMEDMREKTHCRHYELYRKKRLEEVRD--ML----K---------HRHN----RT-NMEDMREKTHCRHY--ELY   58 (122)
Q Consensus         1 ~Li~t~~~dL~~~T~~~~yE~yR~~~L~~~~~--~~----p---------~~~~----~~-~EeemrqvF~~kV~--E~k   58 (122)
                      |||+|||+||+++||++||||||+.+|..+|.  .+    |         .+.+    ++ +|++|+++|.++|+  |++
T Consensus       277 ~l~~t~~~dL~~~T~~~~YE~yR~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~~~v~~~e~~  356 (427)
T 2qag_B          277 MLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQKKEEEMRQMFVQRVKEKEAE  356 (427)
T ss_dssp             HHHHTSTTHHHHHHHHHTTHHHHHHHHHHHC-------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccchhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999998761  11    1         1222    45 99999999999999  999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-------CCcCCCcccCC
Q psy8482          59 RKKRLEELHAKFDKLKKDHADEKKRLEDARKKLEEDLLEFNRRKQQMATMSGS-------HTLTLGKSKKK  122 (122)
Q Consensus        59 lKe~E~EL~~r~Eelk~~l~~~~~~lEek~r~LEee~~~~e~~k~~~~~~~~~-------~t~~~~k~~~~  122 (122)
                      |+++|++|++++++|+..+.++.+.||+++++|++++.+|++.+++|+.++++       .|++++|+|||
T Consensus       357 l~~~e~~l~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (427)
T 2qag_B          357 LKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQGSQAGGSQTLKRDKEKKN  427 (427)
T ss_dssp             -----------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccccccccccC
Confidence            99999999999999999999999999999999999999999999999986655       25677888775



>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A* Back     alignment and structure
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00