Psyllid ID: psy8608


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90---
MFAAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYMIVIVIMAYHNY
cHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MFAAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIyvlpqpsralcftSGVLIEVYMIVIVIMAYHNY
MFAAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYMIVIVIMAYHNY
MFAAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYMIVIVIMAYHNY
**AAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYMIVIVIMAYH**
*FAAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYMIVIVIMAYHNY
MFAAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYMIVIVIMAYHNY
MFAAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYMIVIVIMAYHNY
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooo
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MFAAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYMIVIVIMAYHNY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query93 2.2.26 [Sep-21-2011]
Q64L89155 Microsomal glutathione S- yes N/A 0.645 0.387 0.508 6e-09
Q91VS7155 Microsomal glutathione S- yes N/A 0.752 0.451 0.464 9e-09
P08011155 Microsomal glutathione S- yes N/A 0.752 0.451 0.464 1e-08
P10620155 Microsomal glutathione S- yes N/A 0.752 0.451 0.464 2e-08
P79382155 Microsomal glutathione S- yes N/A 0.645 0.387 0.491 2e-08
>sp|Q64L89|MGST1_BOVIN Microsomal glutathione S-transferase 1 OS=Bos taurus GN=MGST1 PE=2 SV=1 Back     alignment and function desciption
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 12  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALC 71
           AHLNDLENI  FL I LLY ++ P +  A    R++  AR  HT+ Y +  LPQP+RAL 
Sbjct: 75  AHLNDLENIVPFLGIGLLYSLSGPDLSTAILHFRLFVRARIYHTIAY-LTPLPQPNRALA 133

Query: 72  F 72
           F
Sbjct: 134 F 134




Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. Has a wide substrate specificity.
Bos taurus (taxid: 9913)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 1EC: 8
>sp|Q91VS7|MGST1_MOUSE Microsomal glutathione S-transferase 1 OS=Mus musculus GN=Mgst1 PE=1 SV=3 Back     alignment and function description
>sp|P08011|MGST1_RAT Microsomal glutathione S-transferase 1 OS=Rattus norvegicus GN=Mgst1 PE=1 SV=3 Back     alignment and function description
>sp|P10620|MGST1_HUMAN Microsomal glutathione S-transferase 1 OS=Homo sapiens GN=MGST1 PE=1 SV=1 Back     alignment and function description
>sp|P79382|MGST1_PIG Microsomal glutathione S-transferase 1 OS=Sus scrofa GN=MGST1 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query93
332373216151 unknown [Dendroctonus ponderosae] 0.849 0.523 0.531 6e-17
350535885157 uncharacterized protein LOC100165764 [Ac 0.860 0.509 0.525 7e-17
321460187151 hypothetical protein DAPPUDRAFT_231546 [ 0.849 0.523 0.506 7e-17
91086441151 PREDICTED: similar to microsomal glutath 0.849 0.523 0.518 3e-16
387413558150 glutathione s-transferase M2 [Sogatella 0.827 0.513 0.545 1e-15
321460186150 hypothetical protein DAPPUDRAFT_231548 [ 0.849 0.526 0.531 1e-15
242014790154 Microsomal glutathione S-transferase, pu 0.774 0.467 0.527 2e-15
387413424150 glutathione s-transferase M2 [Nilaparvat 0.827 0.513 0.532 5e-15
373940165152 glutathione S-transferase m [Laodelphax 0.827 0.506 0.545 1e-14
387413474148 glutathione s-transferase M1 [Nilaparvat 0.827 0.520 0.506 2e-14
>gi|332373216|gb|AEE61749.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 59/79 (74%)

Query: 12  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALC 71
           AHLNDLENIP F+I+A  Y+ T+P V LA  LIR++T+AR +HT+VY + V+PQP+RAL 
Sbjct: 71  AHLNDLENIPVFIIVAFAYLTTNPSVFLALTLIRLFTVARLIHTLVYAVVVVPQPARALS 130

Query: 72  FTSGVLIEVYMIVIVIMAY 90
           + +G  I +YM V  ++ Y
Sbjct: 131 WFTGYSITIYMAVKSLLYY 149




Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350535885|ref|NP_001233027.1| uncharacterized protein LOC100165764 [Acyrthosiphon pisum] gi|239790773|dbj|BAH71924.1| ACYPI006691 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|321460187|gb|EFX71232.1| hypothetical protein DAPPUDRAFT_231546 [Daphnia pulex] Back     alignment and taxonomy information
>gi|91086441|ref|XP_968617.1| PREDICTED: similar to microsomal glutathione s-transferase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|387413558|gb|AFJ75813.1| glutathione s-transferase M2 [Sogatella furcifera] Back     alignment and taxonomy information
>gi|321460186|gb|EFX71231.1| hypothetical protein DAPPUDRAFT_231548 [Daphnia pulex] Back     alignment and taxonomy information
>gi|242014790|ref|XP_002428068.1| Microsomal glutathione S-transferase, putative [Pediculus humanus corporis] gi|212512587|gb|EEB15330.1| Microsomal glutathione S-transferase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|387413424|gb|AFJ75808.1| glutathione s-transferase M2 [Nilaparvata lugens] Back     alignment and taxonomy information
>gi|373940165|gb|AEY80035.1| glutathione S-transferase m [Laodelphax striatella] Back     alignment and taxonomy information
>gi|387413474|gb|AFJ75810.1| glutathione s-transferase M1 [Nilaparvata lugens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query93
FB|FBgn0025814152 Mgstl "Microsomal glutathione 0.817 0.5 0.526 6.9e-15
FB|FBgn0053177167 CG33177 [Drosophila melanogast 0.881 0.491 0.439 6.4e-12
ZFIN|ZDB-GENE-041010-30154 mgst1 "microsomal glutathione 0.795 0.480 0.44 1e-11
ZFIN|ZDB-GENE-040704-59152 zgc:92357 "zgc:92357" [Danio r 0.795 0.486 0.44 2.8e-11
UNIPROTKB|Q64L89155 MGST1 "Microsomal glutathione 0.752 0.451 0.464 3.2e-10
UNIPROTKB|F1MXY2155 MGST1 "Microsomal glutathione 0.752 0.451 0.464 5.2e-10
UNIPROTKB|E2RHK1155 MGST1 "Uncharacterized protein 0.677 0.406 0.5 6.6e-10
MGI|MGI:1913850155 Mgst1 "microsomal glutathione 0.752 0.451 0.464 6.6e-10
RGD|70927155 Mgst1 "microsomal glutathione 0.752 0.451 0.464 1.1e-09
UNIPROTKB|F1NT14159 MGST1 "Uncharacterized protein 0.795 0.465 0.44 1.4e-09
FB|FBgn0025814 Mgstl "Microsomal glutathione S-transferase-like" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 40/76 (52%), Positives = 49/76 (64%)

Query:    12 AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALC 71
             AH NDLENI  F  I LLY++TDP   LA  L R   +AR +HT+VY + V+PQPSRAL 
Sbjct:    72 AHRNDLENILPFFAIGLLYVLTDPAAFLAINLFRAVGIARIVHTLVYAVVVVPQPSRALA 131

Query:    72 FTSGVLIEVYMIVIVI 87
             F   +   VYM + VI
Sbjct:   132 FFVALGATVYMALQVI 147




GO:0043231 "intracellular membrane-bounded organelle" evidence=ISS
GO:0004364 "glutathione transferase activity" evidence=ISS
GO:0005741 "mitochondrial outer membrane" evidence=ISS
GO:0005811 "lipid particle" evidence=IDA
FB|FBgn0053177 CG33177 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041010-30 mgst1 "microsomal glutathione S-transferase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040704-59 zgc:92357 "zgc:92357" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q64L89 MGST1 "Microsomal glutathione S-transferase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MXY2 MGST1 "Microsomal glutathione S-transferase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RHK1 MGST1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1913850 Mgst1 "microsomal glutathione S-transferase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|70927 Mgst1 "microsomal glutathione S-transferase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NT14 MGST1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q64L89MGST1_BOVIN2, ., 5, ., 1, ., 1, 80.50810.64510.3870yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query93
pfam01124123 pfam01124, MAPEG, MAPEG family 7e-07
>gnl|CDD|216311 pfam01124, MAPEG, MAPEG family Back     alignment and domain information
 Score = 43.4 bits (103), Expect = 7e-07
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 12  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALC 71
           AH N LEN+P FL   LL  +T    + A  L  ++ +AR LH V Y       P R+L 
Sbjct: 50  AHQNTLENLPLFLAALLLAGLTGSPGLAA-LLAWLFVVARVLHAVGY-ATGNIPPLRSLG 107

Query: 72  FTSGVLIEVYMIVIVI 87
           F  G L  + + ++ +
Sbjct: 108 FALGFLALLALALLAL 123


This family is has been called MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism). It includes proteins such as Prostaglandin E synthase. This enzyme catalyzes the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity. Length = 123

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 93
PF01124129 MAPEG: MAPEG family; InterPro: IPR001129 This entr 99.88
COG3686125 Predicted membrane protein [Function unknown] 99.85
COG3788131 Uncharacterized relative of glutathione S-transfer 99.63
COG5331139 Uncharacterized protein conserved in bacteria [Fun 98.54
>PF01124 MAPEG: MAPEG family; InterPro: IPR001129 This entry represents a widespread superfamily known as MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism) [] Back     alignment and domain information
Probab=99.88  E-value=1.9e-22  Score=130.56  Aligned_cols=84  Identities=32%  Similarity=0.392  Sum_probs=76.6

Q ss_pred             hhHHHHHHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHH
Q psy8608           3 AAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYM   82 (93)
Q Consensus         3 ~~~~~Ra~rAh~N~lE~~p~F~~~~ll~~~~g~~~~~~~~~~~~fv~~Rv~h~~~Y~~~~~~~~~Rs~~~~~g~~~~l~~   82 (93)
                      +++.+|++|||+|++||+|+|+++++++..+|+++..++.++++|+++|++|+.+| +.+..++.|+++|.+|+.+++.+
T Consensus        45 ~~~~~R~~ra~~N~~E~~~~f~~~~~~~~~~g~~~~~~~~l~~~~~~~R~~y~~~y-~~~~~~~~R~~~~~~~~~~~~~l  123 (129)
T PF01124_consen   45 PPWLERAQRAHQNFLENLPLFLVAVLLAILTGASPSLAALLAWVFVVARVAYAVGY-IAGNIPPLRSLGFLVGLLCLLAL  123 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-T-HHHHHHHHHHHHHHHHHHHHHH-HCSSSCCCCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhhHhhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH-HcCCCCcHHHHHHHHHHHHHHHH
Confidence            35889999999999999999999999999999999999999999999999999999 78733789999999999999999


Q ss_pred             HHHHH
Q psy8608          83 IVIVI   87 (93)
Q Consensus        83 ~~~~~   87 (93)
                      .+..+
T Consensus       124 ~~~~~  128 (129)
T PF01124_consen  124 ALAAL  128 (129)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98765



Included are: 5-lipoxygenase activating protein (gene FLAP), which seems to be required for the activation of 5-lipoxygenase. Leukotriene C4 synthase (2.5.1.37 from EC), which catalyses the production of LTC4 from LTA4. Microsomal glutathione S-transferase II (2.5.1.18 from EC) (GST-II), which also produces LTC4 from LTA4. Prostaglandin E synthase, which catalyses the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity.; PDB: 3DWW_A 2Q7R_D 2Q7M_B 2PNO_J 3B29_A 3HKK_A 2UUI_A 3PCV_A 2UUH_A 3LEO_A ....

>COG3686 Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily [General function prediction only] Back     alignment and domain information
>COG5331 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query93
2h8a_A154 Structure Of Microsomal Glutathione Transferase 1 I 1e-09
>pdb|2H8A|A Chain A, Structure Of Microsomal Glutathione Transferase 1 In Complex With Glutathione Length = 154 Back     alignment and structure

Iteration: 1

Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 12 AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALC 71 AHLNDLENI FL I LLY ++ P + A RI+ AR HT+ Y + LPQP+R L Sbjct: 74 AHLNDLENIVPFLGIGLLYSLSGPDLSTALIHFRIFVGARIYHTIAY-LTPLPQPNRGLA 132 Query: 72 FTSGVLIEVYM 82 F G + + M Sbjct: 133 FFVGYGVTLSM 143

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query93
3dww_A158 Prostaglandin E synthase; membrane protein, four h 7e-22
2h8a_A154 Microsomal glutathione S-transferase 1; membrane p 8e-20
>3dww_A Prostaglandin E synthase; membrane protein, four helix bundle, isomerase, membrane, transmembrane; HET: GSH; 3.50A {Homo sapiens} Length = 158 Back     alignment and structure
 Score = 82.4 bits (203), Expect = 7e-22
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)

Query: 12  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALC 71
           AH ND+E I  FL +  +Y    P   +A     ++ + R  HTV Y +  L  P R++ 
Sbjct: 77  AHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAY-LGKLRAPIRSVT 135

Query: 72  FTSGVLIEVYMIVIVIMAYHNY 93
           +T   L    M + ++     +
Sbjct: 136 YTLAQLPCASMALQILWEAARH 157


>2h8a_A Microsomal glutathione S-transferase 1; membrane protein; HET: GSH; 3.20A {Rattus norvegicus} SCOP: f.56.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query93
3dww_A158 Prostaglandin E synthase; membrane protein, four h 99.94
2h8a_A154 Microsomal glutathione S-transferase 1; membrane p 99.9
3pcv_A156 Leukotriene C4 synthase; membrane protein, helix b 99.84
2q7r_A161 Arachidonate 5-lipoxygenase-activating protein; fl 99.82
>3dww_A Prostaglandin E synthase; membrane protein, four helix bundle, isomerase, membrane, transmembrane; HET: GSH; 3.50A {Homo sapiens} Back     alignment and structure
Probab=99.94  E-value=7e-27  Score=158.92  Aligned_cols=88  Identities=25%  Similarity=0.384  Sum_probs=84.2

Q ss_pred             hhHHHHHHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHH
Q psy8608           3 AAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYM   82 (93)
Q Consensus         3 ~~~~~Ra~rAh~N~lE~~p~F~~~~ll~~~~g~~~~~~~~~~~~fv~~Rv~h~~~Y~~~~~~~~~Rs~~~~~g~~~~l~~   82 (93)
                      +++++|++|||+|++||+|+|+++++++.++|+++.++..++++|+++|++|+.+| ..+.|+|+|+++|.+|++|++.|
T Consensus        68 ~~~~~Ra~RAh~N~lE~~p~Fl~~~ll~~l~g~~~~~~~~l~~~fv~~Rilh~~~Y-~~~~p~~~Rsl~~~vg~~~~~~m  146 (158)
T 3dww_A           68 DPDVERCLRAHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAY-LGKLRAPIRSVTYTLAQLPCASM  146 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHT-TSSCCGGGGHHHHHHHHSSHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH-HcCCCccHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999 78877899999999999999999


Q ss_pred             HHHHHHHhh
Q psy8608          83 IVIVIMAYH   91 (93)
Q Consensus        83 ~~~~~~~~~   91 (93)
                      +++++..++
T Consensus       147 ~~~~l~~~~  155 (158)
T 3dww_A          147 ALQILWEAA  155 (158)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999999875



>2h8a_A Microsomal glutathione S-transferase 1; membrane protein; HET: GSH; 3.20A {Rattus norvegicus} SCOP: f.56.1.1 Back     alignment and structure
>3pcv_A Leukotriene C4 synthase; membrane protein, helix bundle, HOMO trimer, MGST, mapeg, LY; HET: GSH LMT; 1.90A {Homo sapiens} PDB: 2pno_A* 3b29_A* 2uui_A* 2uuh_A* 3hkk_A* 3leo_A* Back     alignment and structure
>2q7r_A Arachidonate 5-lipoxygenase-activating protein; flap, mapeg, membrane protein, lipid transport; HET: 3CS; 4.00A {Homo sapiens} SCOP: f.56.1.1 PDB: 2q7m_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 93
d2h8aa1139 f.56.1.1 (A:9-147) Microsomal glutathione S-transf 2e-12
d2uuia1146 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human 2e-05
>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 139 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MAPEG domain-like
superfamily: MAPEG domain-like
family: MAPEG domain
domain: Microsomal glutathione S-transferase 1
species: Rat (Rattus norvegicus) [TaxId: 10116]
 Score = 56.8 bits (137), Expect = 2e-12
 Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 12  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALC 71
           AHLNDLENI  FL I LLY ++ P +  A    RI+  AR  HT+ Y +  LPQP+R L 
Sbjct: 66  AHLNDLENIVPFLGIGLLYSLSGPDLSTALIHFRIFVGARIYHTIAY-LTPLPQPNRGLA 124

Query: 72  FTSGVLIEVYMIV 84
           F  G  + + M  
Sbjct: 125 FFVGYGVTLSMAY 137


>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query93
d2h8aa1139 Microsomal glutathione S-transferase 1 {Rat (Rattu 99.93
d2uuia1146 Leukotriene C4 synthase {Human (Homo sapiens) [Tax 99.75
d2q7ra1139 Arachidonate 5-lipoxygenase-activating protein, FL 99.66
>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MAPEG domain-like
superfamily: MAPEG domain-like
family: MAPEG domain
domain: Microsomal glutathione S-transferase 1
species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.93  E-value=4.5e-27  Score=155.04  Aligned_cols=83  Identities=40%  Similarity=0.569  Sum_probs=79.2

Q ss_pred             hhHHHHHHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHH
Q psy8608           3 AAIAVKMVVAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALCFTSGVLIEVYM   82 (93)
Q Consensus         3 ~~~~~Ra~rAh~N~lE~~p~F~~~~ll~~~~g~~~~~~~~~~~~fv~~Rv~h~~~Y~~~~~~~~~Rs~~~~~g~~~~l~~   82 (93)
                      +++++|++|||+|++||+|+|.++++++.++|+++.++..++++|+++|++|++.| +.+.|+|+|+++|.+|++|+++|
T Consensus        57 ~~~v~R~~rah~N~~E~~~~F~~~~l~~~~~~~~~~~~~~l~~~f~~~Ri~h~~~y-~~~~~~p~R~~~~~~g~~~~~~m  135 (139)
T d2h8aa1          57 DEKVERVRRAHLNDLENIVPFLGIGLLYSLSGPDLSTALIHFRIFVGARIYHTIAY-LTPLPQPNRGLAFFVGYGVTLSM  135 (139)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHTTTSCCCSTTHHHHHHHHHHHHHHHHHHH-HSSCSHHHHHHHHHHHTHHHHHH
T ss_pred             CHHHHHHHHHHHcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH-HhcCCccHHHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999999999999999999 88886789999999999999999


Q ss_pred             HHHH
Q psy8608          83 IVIV   86 (93)
Q Consensus        83 ~~~~   86 (93)
                      ++++
T Consensus       136 ~~~i  139 (139)
T d2h8aa1         136 AYRL  139 (139)
T ss_dssp             HHTC
T ss_pred             HHhC
Confidence            9863



>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating protein, FLAP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure