Psyllid ID: psy8647

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270----
MKMMKVKVLPCNQVVSLWAIPAENNLKDSIRMRGVIGIHDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMPSLQPRTSLIT
ccccccEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHEEEEEEcccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHcccccEEEEEHHHHHHHHHHHHHHHHHHcccccccccccccc
cccccccccccccccccccccccccccccccccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHcc
mkmmkvkvlpcnqvvslwaipaennlkdsirmrgvigihdvrdKNIWRALIAELIGTFVLVFVgtgsimwpndpntvdvTKIALTFGFVIATIAQAIGHvsgchinpavTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAvleavtpnpccklgmtglnpsinaTQGLIIEAIITFVLVLTVEAVcddrrtdikgsvPVAVGLAITCCHLAAIKFtgasmnpartlgpavignhwdniwVYWAGPILGGVLAGAGClclchsmpslqprtslit
mkmmkvkvlpcnqVVSLWAipaennlkdsirMRGVIGIHDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHsmpslqprtslit
MKMMKVKVLPCNQVVSLWAIPAENNLKDSIRMRGVIGIHDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPIlggvlagagclclcHSMPSLQPRTSLIT
*****VKVLPCNQVVSLWAIPAENNLKDSIRMRGVIGIHDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHS************
**********************************VIGIHDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMPS*********
MKMMKVKVLPCNQVVSLWAIPAENNLKDSIRMRGVIGIHDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMPSL********
************************NLKDSIRMRGVIGIHDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMPS*********
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
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MKMMKVKVLPCNQVVSLWAIPAENNLKDSIRMRGVIGIHDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMPSLQPRTSLIT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query274 2.2.26 [Sep-21-2011]
Q9NHW7249 Aquaporin AQPAe.a OS=Aede N/A N/A 0.832 0.915 0.573 1e-72
Q7PWV1250 Aquaporin AQPAn.G OS=Anop yes N/A 0.828 0.908 0.556 2e-71
Q23808255 Aquaporin AQPcic OS=Cicad N/A N/A 0.806 0.866 0.616 1e-70
Q9V5Z7245 Aquaporin OS=Drosophila m yes N/A 0.802 0.897 0.539 1e-62
Q25074251 Aquaporin OS=Haematobia i N/A N/A 0.817 0.892 0.508 4e-60
P55088323 Aquaporin-4 OS=Mus muscul yes N/A 0.817 0.693 0.473 2e-53
Q5I4F9326 Aquaporin-4 OS=Notomys al N/A N/A 0.817 0.687 0.464 2e-52
P47863323 Aquaporin-4 OS=Rattus nor yes N/A 0.817 0.693 0.464 4e-52
O77750323 Aquaporin-4 OS=Bos taurus yes N/A 0.813 0.690 0.458 2e-51
Q923J4324 Aquaporin-4 OS=Dipodomys N/A N/A 0.813 0.688 0.458 2e-51
>sp|Q9NHW7|AQP_AEDAE Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2 Back     alignment and function desciption
 Score =  273 bits (697), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/232 (57%), Positives = 180/232 (77%), Gaps = 4/232 (1%)

Query: 26  LKDSIRMRGVIGIHDV-RDKNIWRALIAELIGTFVLVFVGTGSIM-WPNDPNTVDVTKIA 83
           + +S  ++ ++G+ D+  ++NIWR L+AE +GTF LV +G GS M W  D     +T+IA
Sbjct: 1   MTESAGVKQLVGVADITENRNIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPT-MTQIA 59

Query: 84  LTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLE 143
            TFG V+AT+AQA GHVSGCHINPAVTIGL  +  IS+LKG FYI+ QCVGA+AG+A+++
Sbjct: 60  FTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIK 119

Query: 144 AVTPNPCCK-LGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVG 202
           A TP+     LG+TG++P + A QG++IEA+ITF+LV  V  VCD+RR+DIKGS P+A+G
Sbjct: 120 AATPSDVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRSDIKGSAPLAIG 179

Query: 203 LAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGA 254
           L+IT  HL+AIK+TGASMNPAR+ GPAV+  +W + WVYW GPI+GG+LAGA
Sbjct: 180 LSITAGHLSAIKYTGASMNPARSFGPAVVMGNWTDQWVYWVGPIVGGILAGA 231
Forms a water-specific channel.
Aedes aegypti (taxid: 7159)
>sp|Q7PWV1|AQP_ANOGA Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4 Back     alignment and function description
>sp|Q23808|AQP_CICVR Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1 Back     alignment and function description
>sp|Q9V5Z7|AQP_DROME Aquaporin OS=Drosophila melanogaster GN=Drip PE=2 SV=2 Back     alignment and function description
>sp|Q25074|AQP_HAEIX Aquaporin OS=Haematobia irritans exigua PE=2 SV=1 Back     alignment and function description
>sp|P55088|AQP4_MOUSE Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2 Back     alignment and function description
>sp|Q5I4F9|AQP4_NOTAL Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1 Back     alignment and function description
>sp|P47863|AQP4_RAT Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1 Back     alignment and function description
>sp|O77750|AQP4_BOVIN Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3 Back     alignment and function description
>sp|Q923J4|AQP4_DIPME Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query274
208609316246 aquaporin [Coptotermes formosanus] 0.802 0.894 0.620 7e-72
208609314249 aquaporin [Coptotermes formosanus] 0.802 0.883 0.620 9e-72
193806341249 RecName: Full=Aquaporin AQPAe.a 0.832 0.915 0.573 8e-71
157136835244 aquaporin-1 [Aedes aegypti] gi|108880960 0.835 0.938 0.567 1e-70
7576880249 aquaporin [Aedes aegypti] 0.832 0.915 0.568 2e-70
158299454250 AGAP008842-PA [Anopheles gambiae str. PE 0.828 0.908 0.556 1e-69
32469579255 RecName: Full=Aquaporin AQPcic gi|127935 0.806 0.866 0.616 7e-69
242009228281 Aquaporin AQPAe.a, putative [Pediculus h 0.791 0.772 0.587 2e-68
159459914262 aquaporin 1 [Bemisia tabaci] 0.821 0.858 0.549 1e-66
157674501261 putative aquaporin [Lutzomyia longipalpi 0.828 0.869 0.542 4e-63
>gi|208609316|dbj|BAG72255.1| aquaporin [Coptotermes formosanus] Back     alignment and taxonomy information
 Score =  276 bits (706), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 139/224 (62%), Positives = 172/224 (76%), Gaps = 4/224 (1%)

Query: 33  RGVIGIHDVRD-KNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIA 91
           R ++G+HD+ D +NIWR L AE +GTF LV VG  SI  P    +  V +IA TFG  +A
Sbjct: 8   RALLGLHDITDNRNIWRMLSAEFLGTFFLVLVGCSSIT-PLAGRS-SVIQIAFTFGLAVA 65

Query: 92  TIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCC 151
           TIAQA+GHVSGCHINPAVT GL  SGH+S+LK  FYI +QC+GAVAG+AVL+A+TP    
Sbjct: 66  TIAQAVGHVSGCHINPAVTCGLIVSGHVSILKAVFYIAVQCIGAVAGAAVLQALTPAEAE 125

Query: 152 -KLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHL 210
             LGMT +N  +   Q   +EA+ITFVLVLTVEAVCD+RRTD+KGS P+A+GL+I  CHL
Sbjct: 126 DSLGMTTINALVTPVQAFFMEALITFVLVLTVEAVCDERRTDVKGSAPLAIGLSIATCHL 185

Query: 211 AAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGA 254
           AAI +TGASMNPAR+ GPAV+   W++ WVYWAGPI+GGV+AGA
Sbjct: 186 AAINYTGASMNPARSFGPAVMTGMWNHHWVYWAGPIVGGVVAGA 229

Source: Coptotermes formosanus

Species: Coptotermes formosanus

Genus: Coptotermes

Family: Rhinotermitidae

Order: Isoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|208609314|dbj|BAG72254.1| aquaporin [Coptotermes formosanus] Back     alignment and taxonomy information
>gi|193806341|sp|Q9NHW7.2|AQP_AEDAE RecName: Full=Aquaporin AQPAe.a Back     alignment and taxonomy information
>gi|157136835|ref|XP_001656931.1| aquaporin-1 [Aedes aegypti] gi|108880960|gb|EAT45185.1| AAEL003512-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|7576880|gb|AAF64037.1|AF218314_1 aquaporin [Aedes aegypti] Back     alignment and taxonomy information
>gi|158299454|ref|XP_319584.4| AGAP008842-PA [Anopheles gambiae str. PEST] gi|74920823|sp|Q7PWV1.4|AQP_ANOGA RecName: Full=Aquaporin AQPAn.G gi|157013527|gb|EAA14819.5| AGAP008842-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|32469579|sp|Q23808.1|AQP_CICVR RecName: Full=Aquaporin AQPcic gi|1279358|emb|CAA65799.1| aquaporin [Cicadella viridis] Back     alignment and taxonomy information
>gi|242009228|ref|XP_002425393.1| Aquaporin AQPAe.a, putative [Pediculus humanus corporis] gi|212509187|gb|EEB12655.1| Aquaporin AQPAe.a, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|159459914|gb|ABW96354.1| aquaporin 1 [Bemisia tabaci] Back     alignment and taxonomy information
>gi|157674501|gb|ABV60346.1| putative aquaporin [Lutzomyia longipalpis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query274
FB|FBgn0015872245 Drip "Drip" [Drosophila melano 0.777 0.869 0.529 8.4e-58
MGI|MGI:107387323 Aqp4 "aquaporin 4" [Mus muscul 0.773 0.656 0.467 1.3e-50
UNIPROTKB|O77750323 AQP4 "Aquaporin-4" [Bos taurus 0.773 0.656 0.453 1.2e-49
RGD|2143323 Aqp4 "aquaporin 4" [Rattus nor 0.773 0.656 0.458 2e-49
UNIPROTKB|F1LQ18333 Aqp4 "Aquaporin-4" [Rattus nor 0.773 0.636 0.458 2e-49
UNIPROTKB|F1NJZ6313 AQP4 "Uncharacterized protein" 0.773 0.677 0.458 3.2e-49
UNIPROTKB|F1PEB5293 AQP4 "Uncharacterized protein" 0.773 0.723 0.453 4.1e-49
UNIPROTKB|P55087323 AQP4 "Aquaporin-4" [Homo sapie 0.773 0.656 0.453 6.7e-49
ZFIN|ZDB-GENE-040724-152320 aqp4 "aquaporin 4" [Danio reri 0.740 0.634 0.471 3.7e-48
UNIPROTKB|Q2MCJ7270 AQP1 "Uncharacterized protein" 0.755 0.766 0.455 2e-47
FB|FBgn0015872 Drip "Drip" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 117/221 (52%), Positives = 150/221 (67%)

Query:    28 DSIRMRGVIGIHDVRD-KNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTF 86
             +   M   +G+ D+ + K IWR L+ EL+GTF L+FVG GS        +  V +IA TF
Sbjct:     3 EKTEMSKFVGVADITENKKIWRMLLGELVGTFFLIFVGVGST------TSGSVPQIAFTF 56

Query:    87 GFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVT 146
             G  +ATIAQ +GH+SGCHINPAVT+G    G IS+LK  FYII+QCVGA+AG+AV++   
Sbjct:    57 GLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVAL 116

Query:   147 PNPCC-KLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAI 205
                    LG++  +PS+N  Q ++IEA+ITF+LV  V+AV D  R DIKGS P+AVGLAI
Sbjct:   117 DGVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGRQDIKGSAPLAVGLAI 176

Query:   206 TCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPI 246
                HL AIK +GASMNPAR+ GPAV+   W   WVYW GPI
Sbjct:   177 AAGHLCAIKLSGASMNPARSFGPAVVQGVWTYHWVYWVGPI 217
GO:0005372 "water transmembrane transporter activity" evidence=ISS;NAS
GO:0006833 "water transport" evidence=ISS;IDA;NAS
GO:0015250 "water channel activity" evidence=ISS;IDA
GO:0016021 "integral to membrane" evidence=ISS;IDA
GO:0030104 "water homeostasis" evidence=IEP;ISS
GO:0055085 "transmembrane transport" evidence=IDA
GO:0003014 "renal system process" evidence=IEP
GO:0046662 "regulation of oviposition" evidence=IMP
MGI|MGI:107387 Aqp4 "aquaporin 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|O77750 AQP4 "Aquaporin-4" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|2143 Aqp4 "aquaporin 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LQ18 Aqp4 "Aquaporin-4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJZ6 AQP4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PEB5 AQP4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P55087 AQP4 "Aquaporin-4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040724-152 aqp4 "aquaporin 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q2MCJ7 AQP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9NHW7AQP_AEDAENo assigned EC number0.57320.83210.9156N/AN/A
P55087AQP4_HUMANNo assigned EC number0.45810.81380.6904yesN/A
P55088AQP4_MOUSENo assigned EC number0.47360.81750.6934yesN/A
Q23808AQP_CICVRNo assigned EC number0.61600.80650.8666N/AN/A
P61837PIP11_ARATHNo assigned EC number0.36970.82110.7867yesN/A
Q25074AQP_HAEIXNo assigned EC number0.50870.81750.8924N/AN/A
P47863AQP4_RATNo assigned EC number0.46490.81750.6934yesN/A
Q651D5PIP27_ORYSJNo assigned EC number0.36720.76640.7241yesN/A
O77750AQP4_BOVINNo assigned EC number0.45810.81380.6904yesN/A
Q9V5Z7AQP_DROMENo assigned EC number0.53940.80290.8979yesN/A
Q08733PIP13_ARATHNo assigned EC number0.38930.77730.7447yesN/A
Q7PWV1AQP_ANOGANo assigned EC number0.55600.82840.908yesN/A
Q39196PIP14_ARATHNo assigned EC number0.38490.77730.7421yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query274
pfam00230218 pfam00230, MIP, Major intrinsic protein 1e-69
cd00333228 cd00333, MIP, Major intrinsic protein (MIP) superf 9e-63
TIGR00861216 TIGR00861, MIP, MIP family channel proteins 2e-54
COG0580241 COG0580, GlpF, Glycerol uptake facilitator and rel 9e-44
PLN00166250 PLN00166, PLN00166, aquaporin TIP2; Provisional 2e-39
PLN00027252 PLN00027, PLN00027, aquaporin TIP; Provisional 3e-39
PRK05420231 PRK05420, PRK05420, aquaporin Z; Provisional 4e-39
PLN00167256 PLN00167, PLN00167, aquaporin TIP5; Provisional 1e-34
PLN00182283 PLN00182, PLN00182, putative aquaporin NIP4; Provi 3e-31
PLN00026298 PLN00026, PLN00026, aquaporin NIP; Provisional 6e-31
PLN00184296 PLN00184, PLN00184, aquaporin NIP1; Provisional 1e-29
PLN00183274 PLN00183, PLN00183, putative aquaporin NIP7; Provi 7e-26
PTZ00016294 PTZ00016, PTZ00016, aquaglyceroporin; Provisional 4e-22
cd00333228 cd00333, MIP, Major intrinsic protein (MIP) superf 1e-06
COG0580241 COG0580, GlpF, Glycerol uptake facilitator and rel 5e-06
pfam00230218 pfam00230, MIP, Major intrinsic protein 5e-04
TIGR00861216 TIGR00861, MIP, MIP family channel proteins 0.003
>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein Back     alignment and domain information 
 Score =  214 bits (546), Expect = 1e-69
 Identities = 93/209 (44%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 47  WRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHIN 106
           WRA+IAE + T + VF G GS +         +  +AL FG  + T+    GH+SG H+N
Sbjct: 8   WRAVIAEFLATLLFVFFGVGSALGVK-KLYGGLLAVALAFGLALFTLVYCTGHISGAHLN 66

Query: 107 PAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPC-CKLGMTGLNPSINAT 165
           PAVT  L     ISLL+  +YII Q +GA+ G+A+L+ VT            L P +NA 
Sbjct: 67  PAVTFALLVGRRISLLRAIYYIIAQLLGAICGAALLKGVTNGLQRAGGFANSLAPGVNAG 126

Query: 166 QGLIIEAIITFVLVLTVEAVCDDRRTDIKGSV-PVAVGLAITCCHLAAIKFTGASMNPAR 224
           Q  ++E I+TF LV TV A  DD R    G V P+A+G A+   HLA   +TGASMNPAR
Sbjct: 127 QAFVVEIILTFQLVYTVFATTDDPRNGSLGHVAPLAIGFAVFLNHLAGGPYTGASMNPAR 186

Query: 225 TLGPAVIGNHWDNIWVYWAGPILGGVLAG 253
           + GPAV+   WD+ WVYW GP++G  LA 
Sbjct: 187 SFGPAVVLWKWDDHWVYWVGPLIGAALAA 215

MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators. Length = 218
>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins Back     alignment and domain information
>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|165733 PLN00166, PLN00166, aquaporin TIP2; Provisional Back     alignment and domain information
>gnl|CDD|177664 PLN00027, PLN00027, aquaporin TIP; Provisional Back     alignment and domain information
>gnl|CDD|235453 PRK05420, PRK05420, aquaporin Z; Provisional Back     alignment and domain information
>gnl|CDD|215085 PLN00167, PLN00167, aquaporin TIP5; Provisional Back     alignment and domain information
>gnl|CDD|165748 PLN00182, PLN00182, putative aquaporin NIP4; Provisional Back     alignment and domain information
>gnl|CDD|177663 PLN00026, PLN00026, aquaporin NIP; Provisional Back     alignment and domain information
>gnl|CDD|177778 PLN00184, PLN00184, aquaporin NIP1; Provisional Back     alignment and domain information
>gnl|CDD|215092 PLN00183, PLN00183, putative aquaporin NIP7; Provisional Back     alignment and domain information
>gnl|CDD|240230 PTZ00016, PTZ00016, aquaglyceroporin; Provisional Back     alignment and domain information
>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein Back     alignment and domain information
>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 274
KOG0223|consensus238 100.0
PLN00184296 aquaporin NIP1; Provisional 100.0
PTZ00016294 aquaglyceroporin; Provisional 100.0
PF00230227 MIP: Major intrinsic protein; InterPro: IPR000425 100.0
PLN00026298 aquaporin NIP; Provisional 100.0
COG0580241 GlpF Glycerol uptake facilitator and related perme 100.0
PLN00182283 putative aquaporin NIP4; Provisional 100.0
PLN00166250 aquaporin TIP2; Provisional 100.0
PLN00027252 aquaporin TIP; Provisional 100.0
KOG0224|consensus316 100.0
PLN00167256 aquaporin TIP5; Provisional 100.0
PRK05420231 aquaporin Z; Provisional 100.0
PLN00183274 putative aquaporin NIP7; Provisional 100.0
cd00333228 MIP Major intrinsic protein (MIP) superfamily. Mem 100.0
TIGR00861216 MIP MIP family channel proteins. processes. Some m 100.0
PLN00182283 putative aquaporin NIP4; Provisional 99.63
cd00333228 MIP Major intrinsic protein (MIP) superfamily. Mem 99.6
PLN00026 298 aquaporin NIP; Provisional 99.59
PLN00183274 putative aquaporin NIP7; Provisional 99.59
PLN00184 296 aquaporin NIP1; Provisional 99.58
TIGR00861216 MIP MIP family channel proteins. processes. Some m 99.53
KOG0223|consensus238 99.5
PLN00167 256 aquaporin TIP5; Provisional 99.45
PTZ00016 294 aquaglyceroporin; Provisional 99.39
PLN00166250 aquaporin TIP2; Provisional 99.34
PRK05420231 aquaporin Z; Provisional 99.33
PLN00027252 aquaporin TIP; Provisional 99.32
KOG0224|consensus 316 99.3
COG0580 241 GlpF Glycerol uptake facilitator and related perme 99.26
PF00230227 MIP: Major intrinsic protein; InterPro: IPR000425 99.17
COG2116265 FocA Formate/nitrite family of transporters [Inorg 94.53
PRK11562268 nitrite transporter NirC; Provisional 90.41
PRK09713282 focB putative formate transporter; Provisional 88.21
PRK10805285 formate transporter; Provisional 85.54
>KOG0223|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.5e-51  Score=357.02  Aligned_cols=223  Identities=44%  Similarity=0.763  Sum_probs=203.7

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHhhccCCCC-CCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhc
Q psy8647          39 HDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPND-PNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSG  117 (274)
Q Consensus        39 ~~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g  117 (274)
                      .+.++++.+|++++||++|++++|.+|++.....+ ....+.+.+++++|+.+++.+++++++||||+|||||+++++.|
T Consensus         3 ~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~   82 (238)
T KOG0223|consen    3 GELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGG   82 (238)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhC
Confidence            35566889999999999999999999999875432 33335678999999999999999999999999999999999999


Q ss_pred             CCCccchhhhHhHHhHHHHHHHHHHHHhcCCCC--CCcccccCCCCCChhHHHHHHHHHHHHHHHHhhh-eecCCCCCCC
Q psy8647         118 HISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPC--CKLGMTGLNPSINATQGLIIEAIITFVLVLTVEA-VCDDRRTDIK  194 (274)
Q Consensus       118 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~-~~~~~~~~~~  194 (274)
                      ++++.++..|+++|++|+++|+.+.+.+.+.+.  .+.+.+.+.++.+..|+++.|++.||.|++++++ .+|+|+.   
T Consensus        83 ~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---  159 (238)
T KOG0223|consen   83 KISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS---  159 (238)
T ss_pred             CCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc---
Confidence            999999999999999999999999999999852  2566777888999999999999999999999999 6777665   


Q ss_pred             CchhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhccCC
Q psy8647         195 GSVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMP  264 (274)
Q Consensus       195 ~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~~~  264 (274)
                      .+.|+.||+.+.+.+++++++||++|||||+|||++..+.|+++|+||+||++|+++++++|++++.+.+
T Consensus       160 ~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~~  229 (238)
T KOG0223|consen  160 ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPDE  229 (238)
T ss_pred             ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCcc
Confidence            6899999999999999999999999999999999999999999999999999999999999999998763

>PLN00184 aquaporin NIP1; Provisional Back     alignment and domain information
>PTZ00016 aquaglyceroporin; Provisional Back     alignment and domain information
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ] Back     alignment and domain information
>PLN00026 aquaporin NIP; Provisional Back     alignment and domain information
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN00182 putative aquaporin NIP4; Provisional Back     alignment and domain information
>PLN00166 aquaporin TIP2; Provisional Back     alignment and domain information
>PLN00027 aquaporin TIP; Provisional Back     alignment and domain information
>KOG0224|consensus Back     alignment and domain information
>PLN00167 aquaporin TIP5; Provisional Back     alignment and domain information
>PRK05420 aquaporin Z; Provisional Back     alignment and domain information
>PLN00183 putative aquaporin NIP7; Provisional Back     alignment and domain information
>cd00333 MIP Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>TIGR00861 MIP MIP family channel proteins Back     alignment and domain information
>PLN00182 putative aquaporin NIP4; Provisional Back     alignment and domain information
>cd00333 MIP Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>PLN00026 aquaporin NIP; Provisional Back     alignment and domain information
>PLN00183 putative aquaporin NIP7; Provisional Back     alignment and domain information
>PLN00184 aquaporin NIP1; Provisional Back     alignment and domain information
>TIGR00861 MIP MIP family channel proteins Back     alignment and domain information
>KOG0223|consensus Back     alignment and domain information
>PLN00167 aquaporin TIP5; Provisional Back     alignment and domain information
>PTZ00016 aquaglyceroporin; Provisional Back     alignment and domain information
>PLN00166 aquaporin TIP2; Provisional Back     alignment and domain information
>PRK05420 aquaporin Z; Provisional Back     alignment and domain information
>PLN00027 aquaporin TIP; Provisional Back     alignment and domain information
>KOG0224|consensus Back     alignment and domain information
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ] Back     alignment and domain information
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11562 nitrite transporter NirC; Provisional Back     alignment and domain information
>PRK09713 focB putative formate transporter; Provisional Back     alignment and domain information
>PRK10805 formate transporter; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query274
3iyz_A340 Structure Of Aquaporin-4 S180d Mutant At 10.0 A Res 3e-51
2zz9_A301 Structure Of Aquaporin-4 S180d Mutant At 2.8 A Reso 4e-51
2d57_A301 Double Layered 2d Crystal Structure Of Aquaporin-4 2e-50
3gd8_A223 Crystal Structure Of Human Aquaporin 4 At 1.8 And I 5e-49
1j4n_A271 Crystal Structure Of The Aqp1 Water Channel Length 5e-47
1fqy_A269 Structure Of Aquaporin-1 At 3.8 A Resolution By Ele 6e-47
2b6o_A263 Electron Crystallographic Structure Of Lens Aquapor 4e-46
1sor_A235 Aquaporin-0 Membrane Junctions Reveal The Structure 1e-45
1ymg_A263 The Channel Architecture Of Aquaporin O At 2.2 Angs 3e-45
3m9i_A220 Electron Crystallographic Structure Of Lens Aquapor 2e-44
3d9s_A266 Human Aquaporin 5 (Aqp5) - High Resolution X-Ray St 2e-41
3cn6_A304 Crystal Structure Of The Spinach Aquaporin Sopip2;1 7e-31
2b5f_A303 Crystal Structure Of The Spinach Aquaporin Sopip2;1 8e-31
1z98_A281 Crystal Structure Of The Spinach Aquaporin Sopip2;1 8e-31
3cn5_A304 Crystal Structure Of The Spinach Aquaporin Sopip2;1 2e-30
3cll_A300 Crystal Structure Of The Spinach Aquaporin Sopip2;1 2e-30
2o9d_A234 Crystal Structure Of Aqpz Mutant T183c. Length = 23 4e-23
2o9e_A234 Crystal Structure Of Aqpz Mutant T183c Complexed Wi 7e-23
2o9f_A234 Crystal Structure Of Aqpz Mutant L170c Length = 234 8e-23
2evu_A246 Crystal Structure Of Aquaporin Aqpm At 2.3a Resolut 1e-22
1rc2_B231 2.5 Angstrom Resolution X-Ray Structure Of Aquapori 1e-22
3nk5_A234 Crystal Structure Of Aqpz Mutant F43w Length = 234 8e-22
3nka_A234 Crystal Structure Of Aqpz H174g,T183f Length = 234 2e-21
3ne2_A246 Archaeoglobus Fulgidus Aquaporin Length = 246 6e-21
3nkc_A234 Crystal Structure Of Aqpz F43w,H174g,T183f Length = 1e-20
3llq_A256 Aquaporin Structure From Plant Pathogen Agrobacteri 2e-19
2w1p_A279 1.4 Angstrom Crystal Structure Of P.Pastoris Aquapo 9e-18
1ldf_A281 Crystal Structure Of The E. Coli Glycerol Facilitat 9e-13
1fx8_A281 Crystal Structure Of The E. Coli Glycerol Facilitat 6e-12
3c02_A258 X-Ray Structure Of The Aquaglyceroporin From Plasmo 8e-10
>pdb|3IYZ|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 10.0 A Resolution From Electron Micrograph Length = 340 Back     alignment and structure 
Iteration: 1

 Score =  198 bits (503), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 100/216 (46%), Positives = 141/216 (65%), Gaps = 4/216 (1%)
Query: 35  VIGIHDVRDKNIWRALIAELIGTFVLVFVGTGS-IMW--PNDPNTVDVTKIALTFGFVIA 91
           ++    V  +  W+A+ AE +   + V +  GS I W    +P  VD+  I+L FG  IA
Sbjct: 40  MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIA 99
Query: 92  TIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTP-NPC 150
           T+ Q  GH+SG HINPAVT+ + C+  IS+ K  FYI  QC+GA+ G+ +L  VTP +  
Sbjct: 100 TMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVV 159
Query: 151 CKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCHL 210
             LG+T ++ ++ A  GL++E IITF LV T+ A CDD+RTD+ GSV +A+G ++   HL
Sbjct: 160 GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHL 219
Query: 211 AAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPI 246
            AI +TGASMNPAR+ GPAVI  +W+N W+YW GPI
Sbjct: 220 FAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPI 255
>pdb|2ZZ9|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 2.8 A Resolution By Electron Crystallography Length = 301 Back     alignment and structure
>pdb|2D57|A Chain A, Double Layered 2d Crystal Structure Of Aquaporin-4 (Aqp4m23) At 3.2 A Resolution By Electron Crystallography Length = 301 Back     alignment and structure
>pdb|3GD8|A Chain A, Crystal Structure Of Human Aquaporin 4 At 1.8 And Its Mechanism Of Conductance Length = 223 Back     alignment and structure
>pdb|1J4N|A Chain A, Crystal Structure Of The Aqp1 Water Channel Length = 271 Back     alignment and structure
>pdb|1FQY|A Chain A, Structure Of Aquaporin-1 At 3.8 A Resolution By Electron Crystallography Length = 269 Back     alignment and structure
>pdb|2B6O|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp0) (Lens Mip) At 1.9a Resolution, In A Closed Pore State Length = 263 Back     alignment and structure
>pdb|1SOR|A Chain A, Aquaporin-0 Membrane Junctions Reveal The Structure Of A Closed Water Pore Length = 235 Back     alignment and structure
>pdb|1YMG|A Chain A, The Channel Architecture Of Aquaporin O At 2.2 Angstrom Resolution Length = 263 Back     alignment and structure
>pdb|3M9I|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp Mip) In E. Coli Polar Lipids Length = 220 Back     alignment and structure
>pdb|3D9S|A Chain A, Human Aquaporin 5 (Aqp5) - High Resolution X-Ray Structure Length = 266 Back     alignment and structure
>pdb|3CN6|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S274e Mutant Length = 304 Back     alignment and structure
>pdb|2B5F|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In An Open Conformation To 3.9 Resolution Length = 303 Back     alignment and structure
>pdb|1Z98|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In A Closed Conformation Length = 281 Back     alignment and structure
>pdb|3CN5|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e, S274e Mutant Length = 304 Back     alignment and structure
>pdb|3CLL|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e Mutant Length = 300 Back     alignment and structure
>pdb|2O9D|A Chain A, Crystal Structure Of Aqpz Mutant T183c. Length = 234 Back     alignment and structure
>pdb|2O9E|A Chain A, Crystal Structure Of Aqpz Mutant T183c Complexed With Mercury Length = 234 Back     alignment and structure
>pdb|2O9F|A Chain A, Crystal Structure Of Aqpz Mutant L170c Length = 234 Back     alignment and structure
>pdb|2EVU|A Chain A, Crystal Structure Of Aquaporin Aqpm At 2.3a Resolution Length = 246 Back     alignment and structure
>pdb|1RC2|B Chain B, 2.5 Angstrom Resolution X-Ray Structure Of Aquaporin Z Length = 231 Back     alignment and structure
>pdb|3NK5|A Chain A, Crystal Structure Of Aqpz Mutant F43w Length = 234 Back     alignment and structure
>pdb|3NKA|A Chain A, Crystal Structure Of Aqpz H174g,T183f Length = 234 Back     alignment and structure
>pdb|3NE2|A Chain A, Archaeoglobus Fulgidus Aquaporin Length = 246 Back     alignment and structure
>pdb|3NKC|A Chain A, Crystal Structure Of Aqpz F43w,H174g,T183f Length = 234 Back     alignment and structure
>pdb|3LLQ|A Chain A, Aquaporin Structure From Plant Pathogen Agrobacterium Tumerfaciens Length = 256 Back     alignment and structure
>pdb|2W1P|A Chain A, 1.4 Angstrom Crystal Structure Of P.Pastoris Aquaporin, Aqy1, In A Closed Conformation At Ph 8.0 Length = 279 Back     alignment and structure
>pdb|1LDF|A Chain A, Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Mutation W48f, F200t Length = 281 Back     alignment and structure
>pdb|1FX8|A Chain A, Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) With Substrate Glycerol Length = 281 Back     alignment and structure
>pdb|3C02|A Chain A, X-Ray Structure Of The Aquaglyceroporin From Plasmodium Falciparum Length = 258 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query274
3iyz_A340 Aquaporin-4; water transport, water channel, two-d 1e-100
2zz9_A301 Aquaporin-4; water transport, water channel, two-d 1e-98
2b6o_A263 Aquaporin-0, lens fiber major intrinsic protein; a 4e-97
1j4n_A271 Aquaporin 1; membrane protein, channel protein, tr 8e-96
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 2e-95
3d9s_A266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 5e-94
3cn5_A304 Aquaporin; membrane protein, transmembrane, transp 1e-92
2w2e_A279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 8e-90
2o9g_A234 Aquaporin Z; integral membrane protein, structural 2e-86
2o9g_A234 Aquaporin Z; integral membrane protein, structural 2e-05
3llq_A256 Aquaporin Z 2; aquaporin tetramer, membrane protei 2e-85
2f2b_A246 Aquaporin AQPM; protein, integral membrane protein 3e-73
3c02_A258 Aquaglyceroporin; membrane protein, glycerol, wate 1e-54
1ldf_A281 Glycerol uptake facilitator protein; glycerol-cond 8e-49
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Length = 340 Back     alignment and structure
 Score =  295 bits (756), Expect = e-100
 Identities = 106/236 (44%), Positives = 152/236 (64%), Gaps = 4/236 (1%)

Query: 23  ENNLKDSIRMRGVIGIHDVRDKNIWRALIAELIGTFVLVFVGTGSIMW---PNDPNTVDV 79
           +++ KD      ++    V  +  W+A+ AE +   + V +  GS +      +P  VD+
Sbjct: 28  DDDDKDPSSRSIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDM 87

Query: 80  TKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGS 139
             I+L FG  IAT+ Q  GH+SG HINPAVT+ + C+  IS+ K  FYI  QC+GA+ G+
Sbjct: 88  VLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGA 147

Query: 140 AVLEAVTP-NPCCKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVP 198
            +L  VTP +    LG+T ++ ++ A  GL++E IITF LV T+ A CDD+RTD+ GSV 
Sbjct: 148 GILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVA 207

Query: 199 VAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGA 254
           +A+G ++   HL AI +TGASMNPAR+ GPAVI  +W+N W+YW GPI+G VLAGA
Sbjct: 208 LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGA 263
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Length = 301 Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Length = 263 Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Length = 271 Back     alignment and structure
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Length = 223 Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Length = 266 Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Length = 304 Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Length = 279 Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Length = 234 Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Length = 234 Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Length = 256 Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Length = 246 Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Length = 258 Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Length = 281 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query274
3iyz_A340 Aquaporin-4; water transport, water channel, two-d 100.0
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 100.0
2zz9_A301 Aquaporin-4; water transport, water channel, two-d 100.0
3d9s_A266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 100.0
2b6o_A263 Aquaporin-0, lens fiber major intrinsic protein; a 100.0
1j4n_A271 Aquaporin 1; membrane protein, channel protein, tr 100.0
3cn5_A304 Aquaporin; membrane protein, transmembrane, transp 100.0
2w2e_A279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 100.0
3llq_A256 Aquaporin Z 2; aquaporin tetramer, membrane protei 100.0
2o9g_A234 Aquaporin Z; integral membrane protein, structural 100.0
1ldf_A281 Glycerol uptake facilitator protein; glycerol-cond 100.0
2f2b_A246 Aquaporin AQPM; protein, integral membrane protein 100.0
3c02_A258 Aquaglyceroporin; membrane protein, glycerol, wate 100.0
2f2b_A246 Aquaporin AQPM; protein, integral membrane protein 99.64
2b6o_A263 Aquaporin-0, lens fiber major intrinsic protein; a 99.43
2o9g_A234 Aquaporin Z; integral membrane protein, structural 99.4
3d9s_A266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 99.38
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 99.37
3llq_A256 Aquaporin Z 2; aquaporin tetramer, membrane protei 99.37
2w2e_A279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 99.36
3iyz_A340 Aquaporin-4; water transport, water channel, two-d 99.35
2zz9_A301 Aquaporin-4; water transport, water channel, two-d 99.35
3cn5_A304 Aquaporin; membrane protein, transmembrane, transp 99.33
1j4n_A271 Aquaporin 1; membrane protein, channel protein, tr 99.31
1ldf_A281 Glycerol uptake facilitator protein; glycerol-cond 99.28
3c02_A 258 Aquaglyceroporin; membrane protein, glycerol, wate 99.26
3kcu_A285 Probable formate transporter 1; TCDB ID 2.A.44.1.1 91.74
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Back     alignment and structure
Probab=100.00  E-value=3.2e-54  Score=391.91  Aligned_cols=226  Identities=46%  Similarity=0.839  Sum_probs=201.8

Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHhhccCCC---CCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHh
Q psy8647          40 DVRDKNIWRALIAELIGTFVLVFVGTGSIMWPN---DPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCS  116 (274)
Q Consensus        40 ~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~---~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~  116 (274)
                      +...+++||++++||+|||+|+|++++++++..   .....++..+++++|+++++.+++++++||||+|||||+++++.
T Consensus        45 ~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~  124 (340)
T 3iyz_A           45 GVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCT  124 (340)
T ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHc
Confidence            344468899999999999999999999987431   12234677899999999999999999999999999999999999


Q ss_pred             cCCCccchhhhHhHHhHHHHHHHHHHHHhcCCCCC-CcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCCCC
Q psy8647         117 GHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPCC-KLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKG  195 (274)
Q Consensus       117 g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~~~  195 (274)
                      |+++|.+++.|+++|++|+++|+.+++.++++... +++.+.+.++.+..++++.|+++||+|+++++.+.|+++.....
T Consensus       125 G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~  204 (340)
T 3iyz_A          125 RKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTG  204 (340)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCccc
Confidence            99999999999999999999999999999987553 45666777788999999999999999999999998877654456


Q ss_pred             chhHHHHHHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhccCCC
Q psy8647         196 SVPVAVGLAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMPS  265 (274)
Q Consensus       196 ~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~~~~  265 (274)
                      ..|+.||+.+..+...++++||++|||||+|||+++.++|+++||||+||++|+++|+++|++++.+.++
T Consensus       205 ~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~~  274 (340)
T 3iyz_A          205 SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVE  274 (340)
T ss_pred             chhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCChh
Confidence            7899999999888888889999999999999999999999999999999999999999999999976554
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Back     alignment and structure
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Back     alignment and structure
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Back     alignment and structure
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Back     alignment and structure
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Back     alignment and structure
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 274
d1j4na_249 f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId 2e-52
d1j4na_249 f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId 7e-05
d1ymga1234 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [ 5e-51
d1fx8a_254 f.19.1.1 (A:) Glycerol uptake facilitator protein 1e-38
d1fx8a_254 f.19.1.1 (A:) Glycerol uptake facilitator protein 0.001
d1rc2a_231 f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId 7e-37
d1rc2a_231 f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId 0.002
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 249 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  169 bits (429), Expect = 2e-52
 Identities = 92/224 (41%), Positives = 137/224 (61%), Gaps = 9/224 (4%)

Query: 39  HDVRDKNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTK--------IALTFGFVI 90
            + + K  WRA++AE +   + +F+  GS +  + P   + T         ++L FG  I
Sbjct: 3   SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSI 62

Query: 91  ATIAQAIGHVSGCHINPAVTIGLFCSGHISLLKGFFYIIMQCVGAVAGSAVLEAVTPNPC 150
           AT+AQ++GH+SG H+NPAVT+GL  S  IS+L+   YII QCVGA+  +A+L  +T +  
Sbjct: 63  ATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLP 122

Query: 151 -CKLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVGLAITCCH 209
              LG+  L P +N+ QGL IE I T  LVL V A  D RR D+ GS P+A+G ++   H
Sbjct: 123 DNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGH 182

Query: 210 LAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAG 253
           L AI +TG  +NPAR+ G +VI +++ + W++W GP +G  LA 
Sbjct: 183 LLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAV 226
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 249 Back     information, alignment and structure
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234 Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254 Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254 Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Length = 231 Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Length = 231 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query274
d1ymga1234 Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} 100.0
d1j4na_249 Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} 100.0
d1fx8a_254 Glycerol uptake facilitator protein GlpF {Escheric 100.0
d1rc2a_231 Aquaporin Z {Escherichia coli [TaxId: 562]} 100.0
d1fx8a_254 Glycerol uptake facilitator protein GlpF {Escheric 99.38
d1ymga1234 Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} 99.34
d1rc2a_231 Aquaporin Z {Escherichia coli [TaxId: 562]} 99.32
d1j4na_249 Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} 99.24
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.1e-50  Score=353.72  Aligned_cols=223  Identities=39%  Similarity=0.705  Sum_probs=199.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHHhhcccCCcccchHHHHHHHHhcCCCccc
Q psy8647          44 KNIWRALIAELIGTFVLVFVGTGSIMWPNDPNTVDVTKIALTFGFVIATIAQAIGHVSGCHINPAVTIGLFCSGHISLLK  123 (274)
Q Consensus        44 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPAvTl~~~l~g~~~~~~  123 (274)
                      .++||++++||+|||+++|+++++..... .+..+...+++++|++++..+++++++||||+|||||+++++.|+++|++
T Consensus         2 ~s~~r~~laEf~GT~~lvf~g~gs~~~~~-~~~~~~~~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~~~g~i~~~~   80 (234)
T d1ymga1           2 ASFWRAICAEFFASLFYVFFGLGASLRWA-PGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLR   80 (234)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHCSCC--CHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCcchHHHHHHHHHHHHHHHHHHhccccCccCchhhHHHHhccCCChhh
Confidence            46899999999999999999999876432 22234568899999999999999999999999999999999999999999


Q ss_pred             hhhhHhHHhHHHHHHHHHHHHhcCCCCC-CcccccCCCCCChhHHHHHHHHHHHHHHHHhhheecCCCCCCCCchhHHHH
Q psy8647         124 GFFYIIMQCVGAVAGSAVLEAVTPNPCC-KLGMTGLNPSINATQGLIIEAIITFVLVLTVEAVCDDRRTDIKGSVPVAVG  202 (274)
Q Consensus       124 ~~~yi~aQ~lGa~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~vl~~~~~~~~~~~~~~~~~iG  202 (274)
                      .+.|+++|++|+++|+.+++.++++... ......+.++.+..++++.|++.|++|+++++...|+++.......++.+|
T Consensus        81 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~t~~lv~~i~~~~~~~~~~~~~~~~l~ig  160 (234)
T d1ymga1          81 AICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVG  160 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCTTTCTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCSCCCCHHHHHH
T ss_pred             eeeeeehHHHHHHHHHHHHHHHcCccccccccccccCccchhhHHHHHHHHHHHHHHHhheeeecCCccCcCcceeEeeh
Confidence            9999999999999999999999987664 344455667888999999999999999999999988777666667899999


Q ss_pred             HHHHHHHHhhccCcCCcccchhhHHHHHhhcCCCceeehhhhhhHHHHHHHHHHHHHhccCCCCC
Q psy8647         203 LAITCCHLAAIKFTGASMNPARTLGPAVIGNHWDNIWVYWAGPILGGVLAGAGCLCLCHSMPSLQ  267 (274)
Q Consensus       203 ~~v~~~~~~~~~~tG~~lNPAr~~~~~~~~~~~~~~wvy~v~p~~Ga~~a~~l~~~l~~~~~~~~  267 (274)
                      +.+.+.....++.||+++||||||+|++.+++|+++|+||++|++|+++|+++|++++.++.++.
T Consensus       161 ~~v~~~~~~~~~~tG~~~NPAR~~gp~v~~~~~~~~wiy~vgP~~Ga~laa~ly~~~~~~~~~~~  225 (234)
T d1ymga1         161 FSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSV  225 (234)
T ss_dssp             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCCCCH
T ss_pred             HHHHHHHHHhcccccccccchhhhhHHHhccCccCeeeeehHHHHHHHHHHHHHHHHHcCCCcch
Confidence            99999999999999999999999999999999999999999999999999999999987665544
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure