Psyllid ID: psy8706

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
Protein Sequence
MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPIGT
Secondary Structure (PSIPRED)
cccHHHHHHcccEEEEEccccEEcccccEEEEEcccccccccccEEEEEEEEEEEEcccEEEEEEEEEEEEEccccEEEEcccccccccEEEEEEEEccEEEEEcccccccEEEEEcccccccccccccccccEEcccccccccEEEEEEEEEEcccccEEEccccccccccEEEEEEEccccEEc
Secondary Structure Prediction (SSPRO)
cccHHHHHcccccEEEccccHEEccccEEEEEEEEEEEEEHcHccEEccEEEEEEEccEEEEEEEEEEEEEEccccEEEcccccccccccEEEEEEEccccccEEEEEcccEEEEEEEEccccccccccEEEEEEEEccccEEEEEEEEEEEEEEccccEEEEcccccccccccEEEEEEcccccc
Coil and Loop (DISEMBL)
MSVMTRLiysdvqiltlppdtivtssstltsidlnsrtttsscvnfsssfclearqdtrlNCLVGyfdtyfdlpspvefstspistpthwkQSIFllktpitlskVKQDMDFlhskslartttsscvnfsspfclearqdtrlNCLVGyfdtyfdlpspvefstspistpthwKQSIFLLKTPIGT
Flexible Loop (DISEMBL)
MSVMTRLiysdvqiltlppdtivtssstltsidlnsrtttssCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLArtttsscvnFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFstspistpthwkqSIFLLKTPIGT
Low Complexity Region (SEG)
MSVMTRLIYSDVQILTLPPdtivtssstltsidlNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPIGT
Disordered region (IsUnstruct)
****TRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLK*****
Disordered Region (DISOPRED)
MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPIGT
Disordered Region (DISEMBL)
MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPIGT
Disordered Region (DISPRO)
*SVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKT****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPIGT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	186	2.2.26 [Sep-21-2011]
O60678	531	Protein arginine N-methyl	yes	N/A	0.548	0.192	0.358	4e-11
O70467	528	Protein arginine N-methyl	yes	N/A	0.575	0.202	0.341	2e-09
Q922H1	532	Protein arginine N-methyl	yes	N/A	0.586	0.204	0.312	2e-08
P38074	348	HNRNP arginine N-methyltr	yes	N/A	0.419	0.224	0.409	3e-08
O82210	366	Probable protein arginine	yes	N/A	0.543	0.275	0.307	1e-07
Q54EF2	341	Protein arginine N-methyl	yes	N/A	0.473	0.258	0.351	3e-07
Q9NR22	394	Protein arginine N-methyl	no	N/A	0.483	0.228	0.290	3e-07
Q6PAK3	394	Protein arginine N-methyl	no	N/A	0.483	0.228	0.290	3e-07
Q5RGQ2	419	Protein arginine N-methyl	no	N/A	0.483	0.214	0.301	3e-07
A3BMN9	620	Probable protein arginine	no	N/A	0.467	0.140	0.37	6e-07

>sp|O60678|ANM3_HUMAN Protein arginine N-methyltransferase 3 OS=Homo sapiens GN=PRMT3 PE=1 SV=3

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M + +  +  +  L P T+++    +  ID +  TT+ S + FSS F L+  + +  
Sbjct: 391 MSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCH--TTSISDLEFSSDFTLKITRTSMC 448

Query: 61  NCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIFLLKTPITLS 104
             + GYFD YF+    + V FST P ST THWKQ++FLL+ P ++ 
Sbjct: 449 TAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEKPFSVK 494

Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|O70467|ANM3_RAT Protein arginine N-methyltransferase 3 OS=Rattus norvegicus GN=Prmt3 PE=1 SV=1

 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 16/123 (13%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M + +  +  +  +   T+++    +  ID +  TT+ S + FSS F L   +    
Sbjct: 388 MSCMKKAVIPEAVVEVVDHKTLISDPCDIKHIDCH--TTSISDLEFSSDFTLRTTKTAMC 445

Query: 61  NCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIFLLKTP------------ITLSKV 106
             + GYFD YF+    + V FST P ST THWKQ+IFLL+ P            IT+ K 
Sbjct: 446 TAVAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTIFLLEKPFPVKAGEALKGKITVHKN 505

Query: 107 KQD 109
           K+D
Sbjct: 506 KKD 508

Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q922H1|ANM3_MOUSE Protein arginine N-methyltransferase 3 OS=Mus musculus GN=Prmt3 PE=1 SV=2

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 16/125 (12%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTS--SSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDT 58
           MS M + +  +  +  +   T+++      +    ++  TT+ S + FSS F L   +  
Sbjct: 388 MSCMKKAVIPEAVVEVVDHKTLISDPCDIKMDGKHIDCHTTSISDLEFSSDFTLRTTKTA 447

Query: 59  RLNCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIFLLKTP------------ITLS 104
               + GYFD YF+    + V FST P ST THWKQ++FLL+ P            IT+ 
Sbjct: 448 MCTAVAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEKPFPVKAGEALKGKITVH 507

Query: 105 KVKQD 109
           K K+D
Sbjct: 508 KNKKD 512

Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P38074|HMT1_YEAST HNRNP arginine N-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HMT1 PE=1 SV=1

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 16  TLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPS 75
           T+  + + T+S  L   DLN  T   S + F S+F L A++   +N +V +FD  F  P 
Sbjct: 209 TVERNNVNTTSDKLIEFDLN--TVKISDLAFKSNFKLTAKRQDMINGIVTWFDIVFPAPK 266

Query: 76  ---PVEFSTSPISTPTHWKQSIF 95
              PVEFST P +  THWKQ+IF
Sbjct: 267 GKRPVEFSTGPHAPYTHWKQTIF 289

Methylates arginines in a variety of RNA-binding proteins. Methylates NOP3. Can catalyze both the mono- and asymmetric dimethylation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O82210|ANM12_ARATH Probable protein arginine N-methyltransferase 1.2 OS=Arabidopsis thaliana GN=PRMT12 PE=1 SV=1

 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 3/104 (2%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS + R   ++  + T+  + IVT S  L ++D++      +  +F++ F L A+++  +
Sbjct: 219 MSCIKRRAITEPLVDTVDGNQIVTDSKLLKTMDISKMAAGDA--SFTAPFKLVAQRNDHI 276

Query: 61  NCLVGYFDTYFDL-PSPVEFSTSPISTPTHWKQSIFLLKTPITL 103
           + LV YFD  F +    + FST P S  THWKQ++  L+  +T+
Sbjct: 277 HALVAYFDVSFTMCHKKMGFSTGPKSRATHWKQTVLYLEDVLTI 320

Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues present in a glycine and arginine-rich domain (can methylate histones).

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q54EF2|ANM1_DICDI Protein arginine N-methyltransferase 1 OS=Dictyostelium discoideum GN=prmt1 PE=3 SV=1

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 3/91 (3%)

Query: 16  TLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYF-DLP 74
            + P+ IVT+   + ++D+   T T   + F S F L+A +D  ++  V YFD  F    
Sbjct: 209 VVQPNMIVTNDCCILTVDI--MTITKDELKFRSDFKLKALRDDLIHAFVVYFDIEFSKGD 266

Query: 75  SPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
            PV FST P +  THWKQSI   +  I + +
Sbjct: 267 KPVCFSTGPKAKYTHWKQSIMYFEDHIKIQQ 297

Arginine methyltransferase that methylates the guanidino nitrogens of arginyl residues present in proteins such as ribonucleoproteins and histones.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 2

EC: 5

>sp|Q9NR22|ANM8_HUMAN Protein arginine N-methyltransferase 8 OS=Homo sapiens GN=PRMT8 PE=1 SV=2

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 57/93 (61%), Gaps = 3/93 (3%)

Query: 17  LPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYF-DLPS 75
           + P  +VT++  +  +D+   T  +  ++F+S+FCL+ +++  ++ LV YF+  F     
Sbjct: 263 VDPKQVVTNACLIKEVDI--YTVKTEELSFTSAFCLQIQRNDYVHALVTYFNIEFTKCHK 320

Query: 76  PVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQ 108
            + FST+P +  THWKQ++F L+  +T+ + ++
Sbjct: 321 KMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEE 353

Membrane-associated arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA). Able to mono- and dimethylate EWS protein; however its precise role toward EWS remains unclear as it still interacts with fully methylated EWS.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q6PAK3|ANM8_MOUSE Protein arginine N-methyltransferase 8 OS=Mus musculus GN=Prmt8 PE=2 SV=2

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 57/93 (61%), Gaps = 3/93 (3%)

Query: 17  LPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYF-DLPS 75
           + P  +VT++  +  +D+   T  +  ++F+S+FCL+ +++  ++ LV YF+  F     
Sbjct: 263 VDPKQVVTNACLIKEVDI--YTVKTEELSFTSAFCLQIQRNDYVHALVTYFNIEFTKCHK 320

Query: 76  PVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQ 108
            + FST+P +  THWKQ++F L+  +T+ + ++
Sbjct: 321 KMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEE 353

Membrane-associated arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA). Able to mono- and dimethylate EWS protein; however its precise role toward EWS remains unclear as it still interacts with fully methylated EWS.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5RGQ2|ANM8B_DANRE Protein arginine N-methyltransferase 8-B OS=Danio rerio GN=prmt8b PE=2 SV=2

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 56/93 (60%), Gaps = 3/93 (3%)

Query: 17  LPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYF-DLPS 75
           + P  +VT+S  +  +D+   T  +  ++F+S+FCL+ +++  ++ LV YF+  F     
Sbjct: 288 VDPKQVVTNSCLVKEVDI--YTVKTEDLSFTSAFCLQIQRNDYVHALVTYFNIEFTKCHK 345

Query: 76  PVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQ 108
              FST+P +  THWKQ++F L+  +T+ + ++
Sbjct: 346 KTGFSTAPDAPSTHWKQTVFYLEDYLTVRRGEE 378

Membrane-associated arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA). Able to mono- and dimethylate ews protein; however its precise role toward ews remains unclear as it still interacts with fully methylated ews.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|A3BMN9|ANM3_ORYSJ Probable protein arginine N-methyltransferase 3 OS=Oryza sativa subsp. japonica GN=PRMT3 PE=2 SV=1

 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 13/100 (13%)

Query: 17  LPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQD-------TRLNCLVGYFDT 69
           L  + IVT ++ L S DL   T   + ++F+SSF L   +        T    ++ +FDT
Sbjct: 462 LASEDIVTETAVLNSFDL--ATMKENEMDFTSSFELRLSESGVSQSGVTWCYGIILWFDT 519

Query: 70  YFD----LPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
            F        PV  STSP STPTHW Q+IF  + PI ++K
Sbjct: 520 GFTNRFCKEKPVNLSTSPFSTPTHWSQTIFTFEEPIAMAK 559

Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
347970189	568	AGAP003593-PA [Anopheles gambiae str. PE	0.532	0.174	0.415	5e-18
91080947	505	PREDICTED: similar to arginine n-methylt	0.548	0.201	0.471	3e-17
312374937	811	hypothetical protein AND_15303 [Anophele	0.553	0.127	0.409	6e-17
307200512	516	Protein arginine N-methyltransferase 3 [	0.553	0.199	0.466	9e-17
170047213	543	arginine n-methyltransferase [Culex quin	0.569	0.195	0.388	3e-16
157127503	397	protein arginine n-methyltransferase [Ae	0.532	0.249	0.415	4e-16
307168867	455	Protein arginine N-methyltransferase 3 [	0.553	0.226	0.428	4e-16
332030090	519	Protein arginine N-methyltransferase 3 [	0.451	0.161	0.476	2e-15
383857269	511	PREDICTED: protein arginine N-methyltran	0.553	0.201	0.4	8e-15
383857267	525	PREDICTED: protein arginine N-methyltran	0.553	0.196	0.4	8e-15

>gi|347970189|ref|XP_313350.5| AGAP003593-PA [Anopheles gambiae str. PEST] gi|333468817|gb|EAA08812.5| AGAP003593-PA [Anopheles gambiae str. PEST]

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 2/101 (1%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M + +  +  +    P+ I+T+++ + + DL        C NFS  F L+ ++DT+L
Sbjct: 430 MSCMKKEVLREATVEVCKPEHIITNANIIANFDL--MEVDVDCPNFSYDFELKVKRDTQL 487

Query: 61  NCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPI 101
             ++GYFDT+F+LP  +EFSTSP S PTHWKQ+IF L+ P+
Sbjct: 488 TAIIGYFDTFFELPEHIEFSTSPYSRPTHWKQTIFYLEEPV 528

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080947|ref|XP_974375.1| PREDICTED: similar to arginine n-methyltransferase [Tribolium castaneum] gi|270005950|gb|EFA02398.1| hypothetical protein TcasGA2_TC008078 [Tribolium castaneum]

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 67/104 (64%), Gaps = 2/104 (1%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           M  M   + S+  + T+P ++++T   TL  IDL S  T  +C +FSS+F L+A +D  L
Sbjct: 367 MKCMKSEVISEAFVETVPGESVMTDPITLKEIDLAS-CTVDTC-DFSSAFALKATKDAVL 424

Query: 61  NCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLS 104
            CLVGYFDT+FDLP  V FST P +  THW+QS+F LK  I +S
Sbjct: 425 TCLVGYFDTFFDLPKSVHFSTGPEAPKTHWQQSVFYLKETINMS 468

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374937|gb|EFR22396.1| hypothetical protein AND_15303 [Anopheles darlingi]

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 2/105 (1%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M + +  +  +    P+ I+T+++ + + DL        C NFS +F L  ++D +L
Sbjct: 416 MSCMKKEVLREATVEVCKPEHIITNANIIANFDL--MEVDVDCPNFSYNFELTVKRDAQL 473

Query: 61  NCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
             L+GYFDT+F+LP  VEFSTSP + PTHWKQ+IF L+ P  L +
Sbjct: 474 TALIGYFDTFFELPEHVEFSTSPYTRPTHWKQTIFYLEEPQLLDE 518

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200512|gb|EFN80674.1| Protein arginine N-methyltransferase 3 [Harpegnathos saltator]

 Score = 92.0 bits (227), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M   +  +  I     D IVTS++ +   DL + TT   CVNFSS F L  ++   L
Sbjct: 378 MSCMKAEVVREPSIEICNVDDIVTSTAEIQVFDLYNVTT--DCVNFSSPFTLNVKKTGSL 435

Query: 61  NCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
             +VGYFD +FDL +PV FSTSP STPTHWKQ++F L  PI++++
Sbjct: 436 TAMVGYFDIFFDLENPVHFSTSPHSTPTHWKQTVFSLSEPISITE 480

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170047213|ref|XP_001851126.1| arginine n-methyltransferase [Culex quinquefasciatus] gi|167869696|gb|EDS33079.1| arginine n-methyltransferase [Culex quinquefasciatus]

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M + +  +  +    P+ ++T+++ + + DL        C NFS  F L  ++D  L
Sbjct: 405 MSCMKKEVLREATVEVCKPEHVITNANIIANFDLME--VDVDCPNFSYDFELTVKRDCTL 462

Query: 61  NCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQ 108
             LVGYFDT+F+LP  VEFSTSP + PTHWKQ++F ++ PI + + +Q
Sbjct: 463 TALVGYFDTFFELPEHVEFSTSPYTKPTHWKQTLFYVEEPIPVREGQQ 510

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157127503|ref|XP_001655012.1| protein arginine n-methyltransferase [Aedes aegypti] gi|108872937|gb|EAT37162.1| AAEL010829-PA [Aedes aegypti]

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 2/101 (1%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M + +  +  +    P+ ++T+++ + + DL        C NFS SF L  ++  +L
Sbjct: 259 MSCMKKEVLREATVEVCKPEHVITNANIIANFDL--MEVDVDCPNFSYSFELTVKKTCKL 316

Query: 61  NCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPI 101
             LVGYFDT+F+LP  VEFSTSP + PTHWKQ+IF ++ PI
Sbjct: 317 TALVGYFDTFFELPQHVEFSTSPYTRPTHWKQTIFYVEEPI 357

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307168867|gb|EFN61791.1| Protein arginine N-methyltransferase 3 [Camponotus floridanus]

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 2/105 (1%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M   +  +  I     D ++TS++ + S DL   TT   CVNFSS F L  ++   L
Sbjct: 317 MSCMKAEVVREPSIEICNVDNLITSTAEIQSFDLYKVTT--DCVNFSSPFTLNVKKTGSL 374

Query: 61  NCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
             ++GYFD +FDL +P+ FST P STPTHWKQ++F L  PI++++
Sbjct: 375 TAIIGYFDIFFDLENPIHFSTGPHSTPTHWKQTVFSLSEPISITE 419

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030090|gb|EGI69915.1| Protein arginine N-methyltransferase 3 [Acromyrmex echinatior]

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 2/86 (2%)

Query: 20  DTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEF 79
           D ++TS + + + DL   TT   CVNFSS F L  ++   L  ++GYFD +FDL +PV F
Sbjct: 400 DDLITSVAEIQAFDLYKVTT--DCVNFSSPFTLNVKKTGSLTAIIGYFDIFFDLDNPVHF 457

Query: 80  STSPISTPTHWKQSIFLLKTPITLSK 105
           ST P STPTHWKQ++F L  PI++++
Sbjct: 458 STGPYSTPTHWKQTVFSLSEPISITE 483

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857269|ref|XP_003704127.1| PREDICTED: protein arginine N-methyltransferase 3-like isoform 2 [Megachile rotundata]

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 2/105 (1%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M   +  +  I     D ++TS+  +   DL     T  CVNF++ F L  ++   L
Sbjct: 373 MSCMKAEVVREPSIEICNADELITSTVEIHDFDL--YKVTRDCVNFTAPFGLRVKKTGSL 430

Query: 61  NCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
             +VGYFD +FDL +P+ FST P STPTHWKQ++F L  PI++++
Sbjct: 431 TAIVGYFDIFFDLDNPIHFSTGPHSTPTHWKQTVFSLSEPISITE 475

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857267|ref|XP_003704126.1| PREDICTED: protein arginine N-methyltransferase 3-like isoform 1 [Megachile rotundata]

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 2/105 (1%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M   +  +  I     D ++TS+  +   DL     T  CVNF++ F L  ++   L
Sbjct: 387 MSCMKAEVVREPSIEICNADELITSTVEIHDFDL--YKVTRDCVNFTAPFGLRVKKTGSL 444

Query: 61  NCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
             +VGYFD +FDL +P+ FST P STPTHWKQ++F L  PI++++
Sbjct: 445 TAIVGYFDIFFDLDNPIHFSTGPHSTPTHWKQTVFSLSEPISITE 489

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
FB|FBgn0038306	516	Art3 "Arginine methyltransfera	0.301	0.108	0.553	3.9e-13
UNIPROTKB|F1NYG2	513	PRMT3 "Uncharacterized protein	0.532	0.192	0.339	9.3e-11
UNIPROTKB|A6QL80	527	PRMT3 "PRMT3 protein" [Bos tau	0.543	0.191	0.333	2.6e-10
UNIPROTKB|F1P8W2	454	PRMT3 "Uncharacterized protein	0.543	0.222	0.333	9.1e-10
UNIPROTKB|E2RFY5	541	PRMT3 "Uncharacterized protein	0.543	0.186	0.333	1.2e-09
UNIPROTKB|O60678	531	PRMT3 "Protein arginine N-meth	0.354	0.124	0.441	1.5e-09
RGD|620413	528	Prmt3 "protein arginine methyl	0.338	0.119	0.476	3.2e-09
UNIPROTKB|O70467	528	Prmt3 "Protein arginine N-meth	0.338	0.119	0.476	3.2e-09
MGI|MGI:1919224	532	Prmt3 "protein arginine N-meth	0.338	0.118	0.461	4.1e-09
ZFIN|ZDB-GENE-041105-1	512	prmt3 "protein arginine methyl	0.575	0.208	0.285	4.6e-08

FB|FBgn0038306 Art3 "Arginine methyltransferase 3" [Drosophila melanogaster (taxid:7227)]

 Score = 181 (68.8 bits), Expect = 3.9e-13, P = 3.9e-13
 Identities = 31/56 (55%), Positives = 42/56 (75%)

Query:    45 NFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTP 100
             NF+  F L+  +  RL+  VGYF+T F+LPSPV FSTSP +TPTHWKQ++F ++ P
Sbjct:   420 NFTHQFSLKVTKPGRLSAFVGYFETLFELPSPVMFSTSPSATPTHWKQTVFFIENP 475

GO:0016274 "protein-arginine N-methyltransferase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0006479 "protein methylation" evidence=IEA

UNIPROTKB|F1NYG2 PRMT3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 159 (61.0 bits), Expect = 9.3e-11, P = 9.3e-11
 Identities = 35/103 (33%), Positives = 51/103 (49%)

Query:     1 MSVMTRLIYSDVQILTLPPXXXXXXXXXXXXXXXNSRTTTSSCVNFSSSFCLEARQDTRL 60
             MS M + +  +  +  L P               N+ +T    + FSS F L  R  T+ 
Sbjct:   373 MSCMKKAVIPEAVVEVLDPSTLISEASIIKHIDCNAASTLD--LEFSSEFTLTIRTSTKC 430

Query:    61 NCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIFLLKTPI 101
               + GYFD +F+    + V FST P+ T THWKQ++FLL+ PI
Sbjct:   431 TAIAGYFDIFFEKGCHNKVLFSTGPLCTKTHWKQTVFLLEKPI 473

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008276 "protein methyltransferase activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

UNIPROTKB|A6QL80 PRMT3 "PRMT3 protein" [Bos taurus (taxid:9913)]

 Score = 155 (59.6 bits), Expect = 2.6e-10, P = 2.6e-10
 Identities = 35/105 (33%), Positives = 54/105 (51%)

Query:     1 MSVMTRLIYSDVQILTLPPXXXXXXXXXXXXXXXNSRTTTSSCVNFSSSFCLEARQDTRL 60
             MS M + +  +  +  L P               +  TT+ S + FSS F L+  + +  
Sbjct:   387 MSCMKKAVIPEAVVDILDPKTLISDACSIKHI--DCHTTSVSDLEFSSDFTLKITETSLC 444

Query:    61 NCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIFLLKTPITL 103
               + GYFD YF+    + V FST P+ST THWKQ++FLL+ P ++
Sbjct:   445 TAIAGYFDIYFEKNCHNKVVFSTGPLSTKTHWKQTVFLLEKPFSV 489

GO:0005840 "ribosome" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0008276 "protein methyltransferase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1P8W2 PRMT3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 149 (57.5 bits), Expect = 9.1e-10, P = 9.1e-10
 Identities = 35/105 (33%), Positives = 52/105 (49%)

Query:     1 MSVMTRLIYSDVQILTLPPXXXXXXXXXXXXXXXNSRTTTSSCVNFSSSFCLEARQDTRL 60
             MS M + +  +  +  L P               +  TT+ S + FSS F L+  + +  
Sbjct:   314 MSCMKKAVIPEAVVEVLDPKTLISDACSIKQI--DCHTTSVSALEFSSDFTLQITKTSMC 371

Query:    61 NCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIFLLKTPITL 103
               + GYFD +F+    S V FST P S  THWKQ+IFLL+ P ++
Sbjct:   372 TAIAGYFDIFFEKNCHSRVVFSTGPQSARTHWKQTIFLLEKPFSV 416

GO:0008276 "protein methyltransferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|E2RFY5 PRMT3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 149 (57.5 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 35/105 (33%), Positives = 52/105 (49%)

Query:     1 MSVMTRLIYSDVQILTLPPXXXXXXXXXXXXXXXNSRTTTSSCVNFSSSFCLEARQDTRL 60
             MS M + +  +  +  L P               +  TT+ S + FSS F L+  + +  
Sbjct:   401 MSCMKKAVIPEAVVEVLDPKTLISDACSIKQI--DCHTTSVSALEFSSDFTLQITKTSMC 458

Query:    61 NCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIFLLKTPITL 103
               + GYFD +F+    S V FST P S  THWKQ+IFLL+ P ++
Sbjct:   459 TAIAGYFDIFFEKNCHSRVVFSTGPQSARTHWKQTIFLLEKPFSV 503

GO:0005840 "ribosome" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0008276 "protein methyltransferase activity" evidence=IEA

UNIPROTKB|O60678 PRMT3 "Protein arginine N-methyltransferase 3" [Homo sapiens (taxid:9606)]

 Score = 148 (57.2 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 30/68 (44%), Positives = 43/68 (63%)

Query:    38 TTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIF 95
             TT+ S + FSS F L+  + +    + GYFD YF+    + V FST P ST THWKQ++F
Sbjct:   426 TTSISDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVF 485

Query:    96 LLKTPITL 103
             LL+ P ++
Sbjct:   486 LLEKPFSV 493

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0035242 "protein-arginine omega-N asymmetric methyltransferase activity" evidence=IEA

GO:0016274 "protein-arginine N-methyltransferase activity" evidence=NAS

GO:0005737 "cytoplasm" evidence=NAS

GO:0008150 "biological_process" evidence=ND

RGD|620413 Prmt3 "protein arginine methyltransferase 3" [Rattus norvegicus (taxid:10116)]

 Score = 145 (56.1 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 31/65 (47%), Positives = 39/65 (60%)

Query:    38 TTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIF 95
             TT+ S + FSS F L   +      + GYFD YF+    + V FST P ST THWKQ+IF
Sbjct:   423 TTSISDLEFSSDFTLRTTKTAMCTAVAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTIF 482

Query:    96 LLKTP 100
             LL+ P
Sbjct:   483 LLEKP 487

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0005840 "ribosome" evidence=IEA;ISO

GO:0006479 "protein methylation" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008276 "protein methyltransferase activity" evidence=IEA

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=TAS

GO:0016274 "protein-arginine N-methyltransferase activity" evidence=IDA

GO:0019919 "peptidyl-arginine methylation, to asymmetrical-dimethyl arginine" evidence=IDA

GO:0035242 "protein-arginine omega-N asymmetric methyltransferase activity" evidence=IDA

UNIPROTKB|O70467 Prmt3 "Protein arginine N-methyltransferase 3" [Rattus norvegicus (taxid:10116)]

 Score = 145 (56.1 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 31/65 (47%), Positives = 39/65 (60%)

Query:    38 TTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIF 95
             TT+ S + FSS F L   +      + GYFD YF+    + V FST P ST THWKQ+IF
Sbjct:   423 TTSISDLEFSSDFTLRTTKTAMCTAVAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTIF 482

Query:    96 LLKTP 100
             LL+ P
Sbjct:   483 LLEKP 487

GO:0005829 "cytosol" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1919224 Prmt3 "protein arginine N-methyltransferase 3" [Mus musculus (taxid:10090)]

 Score = 144 (55.7 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 30/65 (46%), Positives = 39/65 (60%)

Query:    38 TTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIF 95
             TT+ S + FSS F L   +      + GYFD YF+    + V FST P ST THWKQ++F
Sbjct:   427 TTSISDLEFSSDFTLRTTKTAMCTAVAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVF 486

Query:    96 LLKTP 100
             LL+ P
Sbjct:   487 LLEKP 491

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006479 "protein methylation" evidence=IMP

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008276 "protein methyltransferase activity" evidence=IEA

GO:0016274 "protein-arginine N-methyltransferase activity" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0019919 "peptidyl-arginine methylation, to asymmetrical-dimethyl arginine" evidence=ISO

GO:0032259 "methylation" evidence=IEA

GO:0035242 "protein-arginine omega-N asymmetric methyltransferase activity" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-041105-1 prmt3 "protein arginine methyltransferase 3" [Danio rerio (taxid:7955)]

 Score = 134 (52.2 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 32/112 (28%), Positives = 54/112 (48%)

Query:     1 MSVMTRLIYSDVQILTLPPXXXXXXXXXXXXXXXNSRTTTSSCVNFSSSFCLEARQDTRL 60
             M+ M + +  +  +  L P                S + +   + FS  F L+    +  
Sbjct:   372 MTCMKKAVIPEAVVEVLKPETVISESAVIKTIDCGSVSVSE--LEFSVDFILKITASSFC 429

Query:    61 NCLVGYFDTYF--DLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDM 110
               +VGYFD +F     + V FST+P  T THWKQ++FLL++P+ + K  +D+
Sbjct:   430 TAIVGYFDIFFHKSCGNKVMFSTAPNCTKTHWKQTVFLLESPVAV-KAGEDL 480

GO:0006479 "protein methylation" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0032259 "methylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	186
KOG1499|consensus	346		99.97
KOG1499|consensus	346		99.92
KOG1500|consensus	517		99.64
PF05185	448	PRMT5: PRMT5 arginine-N-methyltransferase; InterPr	99.62
KOG1500|consensus	517		99.43
PF05185	448	PRMT5: PRMT5 arginine-N-methyltransferase; InterPr	99.33
KOG0822|consensus	649		97.84
PTZ00357	1072	methyltransferase; Provisional	96.34
KOG0822|consensus	649		94.66
PTZ00357	1072	methyltransferase; Provisional	93.22
KOG1501|consensus	636		92.48

>KOG1499|consensus

Probab=99.97  E-value=1.3e-31  Score=228.04  Aligned_cols=133  Identities=25%  Similarity=0.445  Sum_probs=123.0

Q ss_pred             CccchhhhhcCceEEecCCCCcCCCCceEEEEecCccCCCCcceeEeecEEEEeecCceeeEEEEEEEEEec-CC--CcE
Q psy8706           1 MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD-LP--SPV   77 (186)
Q Consensus         1 Ms~~~~~~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~-~~--~~v   77 (186)
                      ||||++.+.+||+|+.+++++|+++||.++++|++|+  +++|++|+++|++++.|++.+||+++|||+.|+ ++  .++
T Consensus       196 ms~~~~~~~~e~lv~vv~~~~l~t~~~~i~~~Dl~t~--~i~d~~F~s~f~l~v~r~~~i~g~v~yFDv~F~~~~~~~~~  273 (346)
T KOG1499|consen  196 MSCIKKIAIKEPLVDVVDPEQLLTEPCLIKEFDLYTV--KIEDLSFTSPFKLKVTRNGYLHAFVAYFDVEFTGCHGKKRL  273 (346)
T ss_pred             hhhhhhhhhcccceeccChhHhcccceeeEEeeeeee--eccceeeccceEEEEccCceEEEEEEEEEEeeccCCCCCcc
Confidence            8999999999999999999999999999999999999  999999999999999999999999999999999 44  789


Q ss_pred             EEEecCCCCCcccceeEeeecCeeEeecCceeeeeeeecccccccccccccccCCeEEEe
Q psy8706          78 EFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEA  137 (186)
Q Consensus        78 ~LSTsP~~~~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl~~~~~~~dl~~~~~f~~~~  137 (186)
                      .|||||.+|+||||||+||+++|+.|+.|+.|.|.+.+..+..  ...+|++...+.++.
T Consensus       274 ~fST~P~~p~THWKQtVfyl~~p~~v~~ge~i~g~it~~~~~~--~~R~l~~~l~~~~~~  331 (346)
T KOG1499|consen  274 GFSTSPSSPYTHWKQTVFYLENPLTVKEGEDITGTITMKPNKK--NNRDLDISLSLNFKG  331 (346)
T ss_pred             eeecCCCCCCceeeeEEEEecCccceecCceEEEEEEEeeCCC--CCccceEEEEEecCC
Confidence            9999999999999999999999999999999999999998753  566777666555543

>KOG1499|consensus

Probab=99.92  E-value=5.6e-26  Score=193.70  Aligned_cols=134  Identities=27%  Similarity=0.401  Sum_probs=100.5

Q ss_pred             EEEeec-CceeeEEEEEEEEEec-------------------CCCcEEEEecCCCCCcccceeEeeecCee---------
Q psy8706          51 CLEARQ-DTRLNCLVGYFDTYFD-------------------LPSPVEFSTSPISTPTHWKQSIFLLKTPI---------  101 (186)
Q Consensus        51 ~l~~~~-~~~v~g~~~wFd~~F~-------------------~~~~v~LSTsP~~~~THWkQtv~~l~~p~---------  101 (186)
                      +|++.+ |.+++.|||||.++-.                   .|+...|.-.|......-...+-+|++.+         
T Consensus       122 ~LP~eKVDiIvSEWMGy~Ll~EsMldsVl~ARdkwL~~~G~i~P~~a~l~l~~i~d~~~~~~~i~fW~~Vygfdms~~~~  201 (346)
T KOG1499|consen  122 ELPVEKVDIIVSEWMGYFLLYESMLDSVLYARDKWLKEGGLIYPDRATLYLAAIEDDSYKDDKIGFWDDVYGFDMSCIKK  201 (346)
T ss_pred             ecCccceeEEeehhhhHHHHHhhhhhhhhhhhhhccCCCceEccccceEEEEeccCchhhhhhcCccccccccchhhhhh
Confidence            566666 8999999999988422                   13455666666544333233333444332         


Q ss_pred             --------EeecCceeee-e--eeecccccccccccccccCCeEEEeccCCcEeEEEEEEEEEecC-C--CceEEccCCC
Q psy8706         102 --------TLSKVKQDMD-F--LHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDL-P--SPVEFSTSPI  167 (186)
Q Consensus       102 --------~v~~g~~I~g-~--v~~~dl~~~~~~~dl~~~~~f~~~~~~~~~~~g~~~wFd~~F~~-~--~~v~lsT~P~  167 (186)
                              ++..++++.. .  +...| ++|++.+|++|+++|+++++|++.+|||++||||.|++ +  +++.|||||.
T Consensus       202 ~~~~e~lv~vv~~~~l~t~~~~i~~~D-l~t~~i~d~~F~s~f~l~v~r~~~i~g~v~yFDv~F~~~~~~~~~~fST~P~  280 (346)
T KOG1499|consen  202 IAIKEPLVDVVDPEQLLTEPCLIKEFD-LYTVKIEDLSFTSPFKLKVTRNGYLHAFVAYFDVEFTGCHGKKRLGFSTSPS  280 (346)
T ss_pred             hhhcccceeccChhHhcccceeeEEee-eeeeeccceeeccceEEEEccCceEEEEEEEEEEeeccCCCCCcceeecCCC
Confidence                    3444555544 2  44444 55899999999999999999999999999999999994 4  7999999999


Q ss_pred             CCCCceeeeEEeccCCCC
Q psy8706         168 STPTHWKQSIFLLKTPIG  185 (186)
Q Consensus       168 ~~~THWkQt~~~l~~p~~  185 (186)
                      +|+||||||||||++|++
T Consensus       281 ~p~THWKQtVfyl~~p~~  298 (346)
T KOG1499|consen  281 SPYTHWKQTVFYLENPLT  298 (346)
T ss_pred             CCCceeeeEEEEecCccc
Confidence            999999999999999975

>KOG1500|consensus

Probab=99.64  E-value=1.2e-16  Score=136.30  Aligned_cols=110  Identities=23%  Similarity=0.236  Sum_probs=99.1

Q ss_pred             hhhhcCceEEecCCCCcCCCCceEEEEecCccCCCCcce-eEeecEEEEeecCceeeEEEEEEEEEec-CCCcEEEEecC
Q psy8706           6 RLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCV-NFSSSFCLEARQDTRLNCLVGYFDTYFD-LPSPVEFSTSP   83 (186)
Q Consensus         6 ~~~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl-~~~~~f~l~~~~~~~v~g~~~wFd~~F~-~~~~v~LSTsP   83 (186)
                      +.++.+|+||.+|++-++..++. ..+|+..+  +.+|+ .+..++++.+...|++||++.|||+.|+ +--.+.|+|+|
T Consensus       325 ~eYFrQPvVDtFD~RilmA~sv~-h~~dF~~~--kEedlh~i~iPlkF~~~~~g~iHGLAfWFDV~F~GS~~~~wlsTap  401 (517)
T KOG1500|consen  325 QEYFRQPVVDTFDIRILMAKSVF-HVIDFLNM--KEEDLHEIDIPLKFHALQCGRIHGLAFWFDVLFDGSTVQVWLSTAP  401 (517)
T ss_pred             hhhhccccccccccceeeccchH-hhhhhhhc--ccchheeecccceehhhhhcceeeeeeEEEEEeccceEEEccCCCC
Confidence            34588899999999988877764 58899999  99999 7999999999999999999999999999 34568899999


Q ss_pred             CCCCcccceeEeeecCeeEeecCceeeeeeeeccc
Q psy8706          84 ISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSL  118 (186)
Q Consensus        84 ~~~~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl  118 (186)
                      .+|.|||.|..+.|..|+-++.|+.+.|++..+.+
T Consensus       402 ~apltHwyqvrCll~~Pi~v~aGq~ltGr~~LiA~  436 (517)
T KOG1500|consen  402 TAPLTHWYQVRCLLSQPIFVKAGQTLTGRLLLIAN  436 (517)
T ss_pred             CCCcccceeeeeeccCchhhhcCCeeeeeEEEEEc
Confidence            99999999999999999999999999999887664

>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase []

Probab=99.62  E-value=2.6e-15  Score=134.10  Aligned_cols=104  Identities=21%  Similarity=0.309  Sum_probs=87.4

Q ss_pred             hhhcCceEEecCCCCcCCCC-ceEEEEecCccCCC---CcceeEeecEEEEeecCceeeEEEEEEEEEecCCCcEEEEec
Q psy8706           7 LIYSDVQILTLPPDTIVTSS-STLTSIDLNSRTTT---SSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTS   82 (186)
Q Consensus         7 ~~~~ep~v~~v~~~~ilt~~-~~i~~~Dl~t~~~~---~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~~~~~v~LSTs   82 (186)
                      ..+..|.|..+.+...|+++ ..+.+++..+.  .   .++......+++++.++|.+|||++|||+.|.  +.|.|||+
T Consensus       321 ~~~e~pyvv~~~~~~~Ls~~~~~~~~F~hp~~--~~~~~~~~~r~~~~~F~i~~~g~vhGfagwFd~~Ly--~~V~LSt~  396 (448)
T PF05185_consen  321 SSFETPYVVHLSPFELLSDPPQPVFTFDHPNP--DLPENSDNSRSSELEFKIKRDGVVHGFAGWFDAVLY--GDVVLSTS  396 (448)
T ss_dssp             HHHTSSEEE--GGGGBCSCCEEEEEETTTCGG--G-GGGGGSEEEEEEEEEBSSSEEEEEEEEEEEEEEE--CSEEEESS
T ss_pred             hhcCCcEEEEccchhhhcCCceEEEEeccCCc--cccchhhhheeeeEEEeeCCCcEEEEEEEEEEEEee--CCeeeecC
Confidence            45788999999999999999 88889998887  5   34557888999999999999999999999998  56999999


Q ss_pred             CCC----CCcccceeEeeecCeeEeecCceeeeeee
Q psy8706          83 PIS----TPTHWKQSIFLLKTPITLSKVKQDMDFLH  114 (186)
Q Consensus        83 P~~----~~THWkQtv~~l~~p~~v~~g~~I~g~v~  114 (186)
                      |..    +.|||+|++|+|++|+.|++|+.|.+.+.
T Consensus       397 P~~~~s~~~tsW~q~~fpL~~Pl~V~~g~~I~~~i~  432 (448)
T PF05185_consen  397 PSSAHSPPMTSWFQIFFPLEEPLYVKAGDEISVHIW  432 (448)
T ss_dssp             TTS---TT--TTEEEEEEEEEEEEE-TT-EEEEEEE
T ss_pred             CCcCCCCCCCeEeEEEEEecCcEEECCCCEEEEEEE
Confidence            998    89999999999999999999999988753

These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B ....

>KOG1500|consensus

Probab=99.43  E-value=9.2e-14  Score=118.78  Aligned_cols=139  Identities=24%  Similarity=0.322  Sum_probs=95.9

Q ss_pred             CCCcceeEeecEEEEeecCceeeEEEEEEEEEec------------CCCcE------EEEecCCCC----------Cccc
Q psy8706          39 TTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD------------LPSPV------EFSTSPIST----------PTHW   90 (186)
Q Consensus        39 ~~~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~------------~~~~v------~LSTsP~~~----------~THW   90 (186)
                      |++||+      +|+-.-|.+++.=+||..+--.            .++..      .+-.+|++.          ...|
T Consensus       233 GKiEdi------eLPEk~DviISEPMG~mL~NERMLEsYl~Ark~l~P~GkMfPT~gdiHlAPFsDE~Ly~E~~nkAnFW  306 (517)
T KOG1500|consen  233 GKIEDI------ELPEKVDVIISEPMGYMLVNERMLESYLHARKWLKPNGKMFPTVGDIHLAPFSDEQLYVEQFNKANFW  306 (517)
T ss_pred             Cccccc------cCchhccEEEeccchhhhhhHHHHHHHHHHHhhcCCCCcccCcccceeecccchHHHHHHHHhhhhhh
Confidence            577765      3444446778888887765322            22222      344578754          6679


Q ss_pred             ceeEeeec---------------Cee--EeecCceeeee-eeecccccccccccc-cccCCeEEEeccCCcEeEEEEEEE
Q psy8706          91 KQSIFLLK---------------TPI--TLSKVKQDMDF-LHSKSLARTTTSSCV-NFSSPFCLEARQDTRLNCLVGYFD  151 (186)
Q Consensus        91 kQtv~~l~---------------~p~--~v~~g~~I~g~-v~~~dl~~~~~~~dl-~~~~~f~~~~~~~~~~~g~~~wFd  151 (186)
                      .|.-||=-               .|+  .....-.+... .++.+.+. .+.+|| .+..|++|.+...|.+||++.|||
T Consensus       307 yQq~fyGVdLt~L~g~a~~eYFrQPvVDtFD~RilmA~sv~h~~dF~~-~kEedlh~i~iPlkF~~~~~g~iHGLAfWFD  385 (517)
T KOG1500|consen  307 YQQNFYGVDLTPLYGSAHQEYFRQPVVDTFDIRILMAKSVFHVIDFLN-MKEEDLHEIDIPLKFHALQCGRIHGLAFWFD  385 (517)
T ss_pred             hhhccccccchhhhhhhhhhhhccccccccccceeeccchHhhhhhhh-cccchheeecccceehhhhhcceeeeeeEEE
Confidence            88877632               222  00111111122 23444443 467888 699999999999999999999999


Q ss_pred             EEecCC-CceEEccCCCCCCCceeeeEEeccCCC
Q psy8706         152 TYFDLP-SPVEFSTSPISTPTHWKQSIFLLKTPI  184 (186)
Q Consensus       152 ~~F~~~-~~v~lsT~P~~~~THWkQt~~~l~~p~  184 (186)
                      |.|.|. ..+.|||+|.+|.|||.|.+++|..||
T Consensus       386 V~F~GS~~~~wlsTap~apltHwyqvrCll~~Pi  419 (517)
T KOG1500|consen  386 VLFDGSTVQVWLSTAPTAPLTHWYQVRCLLSQPI  419 (517)
T ss_pred             EEeccceEEEccCCCCCCCcccceeeeeeccCch
Confidence            999974 478899999999999999999999997

>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase []

Probab=99.33  E-value=1.7e-12  Score=116.13  Aligned_cols=126  Identities=27%  Similarity=0.343  Sum_probs=84.1

Q ss_pred             CceeeEEEEEEEEEec-------------------CCCcEEEEecCCCCCcccceeE-----eeecCee--EeecCceee
Q psy8706          57 DTRLNCLVGYFDTYFD-------------------LPSPVEFSTSPISTPTHWKQSI-----FLLKTPI--TLSKVKQDM  110 (186)
Q Consensus        57 ~~~v~g~~~wFd~~F~-------------------~~~~v~LSTsP~~~~THWkQtv-----~~l~~p~--~v~~g~~I~  110 (186)
                      |.+|++++|.|-. .+                   -|+...+..+|.+.+..|.+..     ..++.|+  .+.+...+.
T Consensus       260 DIIVSElLGsfg~-nEl~pE~Lda~~rfLkp~Gi~IP~~~t~ylaPiss~~l~~~~~~~~~~~~~e~pyvv~~~~~~~Ls  338 (448)
T PF05185_consen  260 DIIVSELLGSFGD-NELSPECLDAADRFLKPDGIMIPSSYTSYLAPISSPKLYQEVRNWWNPSSFETPYVVHLSPFELLS  338 (448)
T ss_dssp             EEEEE---BTTBT-TTSHHHHHHHGGGGEEEEEEEESSEEEEEEEEEE-HHHHHHHHHHHGHHHHTSSEEE--GGGGBCS
T ss_pred             eEEEEeccCCccc-cccCHHHHHHHHhhcCCCCEEeCcchhhEEEEeeCHHHHHHHHhhcchhhcCCcEEEEccchhhhc
Confidence            6789999997643 11                   1345566677876666666543     2355665  345555555


Q ss_pred             ee-eeeccccc-ccc---cccccccCCeEEEeccCCcEeEEEEEEEEEecCCCceEEccCCCC----CCCceeeeEEecc
Q psy8706         111 DF-LHSKSLAR-TTT---SSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPIS----TPTHWKQSIFLLK  181 (186)
Q Consensus       111 g~-v~~~dl~~-~~~---~~dl~~~~~f~~~~~~~~~~~g~~~wFd~~F~~~~~v~lsT~P~~----~~THWkQt~~~l~  181 (186)
                      .. ..+....+ +.+   .++.+....++|+++++|.+|||++|||+.|.+.  |.|||+|..    +.|||+|++|+|+
T Consensus       339 ~~~~~~~~F~hp~~~~~~~~~~~r~~~~~F~i~~~g~vhGfagwFd~~Ly~~--V~LSt~P~~~~s~~~tsW~q~~fpL~  416 (448)
T PF05185_consen  339 DPPQPVFTFDHPNPDLPENSDNSRSSELEFKIKRDGVVHGFAGWFDAVLYGD--VVLSTSPSSAHSPPMTSWFQIFFPLE  416 (448)
T ss_dssp             CCEEEEEETTTCGGG-GGGGGSEEEEEEEEEBSSSEEEEEEEEEEEEEEECS--EEEESSTTS---TT--TTEEEEEEEE
T ss_pred             CCceEEEEeccCCccccchhhhheeeeEEEeeCCCcEEEEEEEEEEEEeeCC--eeeecCCCcCCCCCCCeEeEEEEEec
Confidence            54 33333311 112   4566789999999999999999999999999754  999999998    8999999999999


Q ss_pred             CCCC
Q psy8706         182 TPIG  185 (186)
Q Consensus       182 ~p~~  185 (186)
                      +|+.
T Consensus       417 ~Pl~  420 (448)
T PF05185_consen  417 EPLY  420 (448)
T ss_dssp             EEEE
T ss_pred             CcEE
Confidence            9974

These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B ....

>KOG0822|consensus

Probab=97.84  E-value=5.4e-05  Score=68.67  Aligned_cols=104  Identities=17%  Similarity=0.227  Sum_probs=79.1

Q ss_pred             hhhcCceEEecCCCCcCCCCceEEEEecCccCCCCcceeEeecEEEEeecCceeeEEEEEEEEEecCCCcEEEEecCCCC
Q psy8706           7 LIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPIST   86 (186)
Q Consensus         7 ~~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~~~~~v~LSTsP~~~   86 (186)
                      .++..|+|-.+.+=..|+++..+++|.--....+++. +-.+..++++.++|.+|||+||||+..-  ..+.||+-|...
T Consensus       502 ~~fe~~YVV~l~~~~~La~~q~vftF~HPN~~~nv~N-~R~~s~eF~~~~~~~lHGFaGYFd~~LY--kdI~LSI~P~T~  578 (649)
T KOG0822|consen  502 NAFEAPYVVLLHNYCILAEPQPVFTFEHPNFDFNVDN-SRSKSVEFKVKSNGVLHGFAGYFDAVLY--KDIFLSIEPNTH  578 (649)
T ss_pred             cccccceEEEecceeecCCCCceeEEecCCccccccc-ccceeEEEecCCCceEeecchhhhhhhh--heeeEeeccCCC
Confidence            3577799999999899999999988754332001111 1122346777899999999999999776  679999988532


Q ss_pred             ---CcccceeEeeecCeeEeecCceeeeee
Q psy8706          87 ---PTHWKQSIFLLKTPITLSKVKQDMDFL  113 (186)
Q Consensus        87 ---~THWkQtv~~l~~p~~v~~g~~I~g~v  113 (186)
                         -..|--.+|.+++|+.|.+|++|+..+
T Consensus       579 TP~MfSWFPi~fPlk~Pi~v~e~~~lsv~~  608 (649)
T KOG0822|consen  579 TPGMFSWFPIFFPLKQPITVREGSTLSVHF  608 (649)
T ss_pred             CCCceeeeeeeeeccCceEeCCCCeEEEEE
Confidence               456999999999999999999998753

>PTZ00357 methyltransferase; Provisional

Probab=96.34  E-value=0.036  Score=52.46  Aligned_cols=88  Identities=16%  Similarity=0.266  Sum_probs=61.0

Q ss_pred             hcCceEEecCCCCcCCCCceEEEEecCccCCCCc-----------------ceeEeecEEEEeecCceeeEEEEEEEEEe
Q psy8706           9 YSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSS-----------------CVNFSSSFCLEARQDTRLNCLVGYFDTYF   71 (186)
Q Consensus         9 ~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~-----------------dl~~~~~f~l~~~~~~~v~g~~~wFd~~F   71 (186)
                      +..++|-.+..-..|+.|..+++|.--+.  ...                 +.+-.+...+++..++.+|||+|||++..
T Consensus       882 fet~YVV~L~s~~~La~PQPcFTFeHPn~--~~s~n~y~~~~g~~~~~~~i~N~Rya~L~F~v~~d~vlHGFAGYFdAvL  959 (1072)
T PTZ00357        882 NHTLLVTNLSRAVTLAPPQPCWTFEHRFH--GGSDNDYKGDRGAMKRREPVSLERAASLLFEVPPCGRCCGLAGYFSAVL  959 (1072)
T ss_pred             cccceEEEecceeecCCCcceeEEECCCc--ccccccccccccccccccccccceeEEEEEecCCCcceeeeeeEEEEEe
Confidence            44578888888778889998888876443  211                 11223456678889999999999999977


Q ss_pred             cCC---CcEEEEecCCCCC---cccceeEeeec
Q psy8706          72 DLP---SPVEFSTSPISTP---THWKQSIFLLK   98 (186)
Q Consensus        72 ~~~---~~v~LSTsP~~~~---THWkQtv~~l~   98 (186)
                      -.+   ..+.|||.|....   --|-...|.|+
T Consensus       960 YkDVt~~~V~LSI~P~ThTpgMfSWFPIFFPLe  992 (1072)
T PTZ00357        960 YQSATAPATIIATAPVERTEDMYSWFPCVFALE  992 (1072)
T ss_pred             ecCCCccceEeecCCCCCCCCccceeeeEEecC
Confidence            632   2378999996431   23777777665

>KOG0822|consensus

Probab=94.66  E-value=0.025  Score=51.83  Aligned_cols=52  Identities=25%  Similarity=0.442  Sum_probs=41.4

Q ss_pred             CeEEEeccCCcEeEEEEEEEEEecCCCceEEccCCCCC---CCceeeeEEeccCCCC
Q psy8706         132 PFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPIST---PTHWKQSIFLLKTPIG  185 (186)
Q Consensus       132 ~f~~~~~~~~~~~g~~~wFd~~F~~~~~v~lsT~P~~~---~THWkQt~~~l~~p~~  185 (186)
                      ..+|+++++|.+|||++|||...-  +-|.||+-|..-   -+-|-.-+|.|++|+.
T Consensus       543 s~eF~~~~~~~lHGFaGYFd~~LY--kdI~LSI~P~T~TP~MfSWFPi~fPlk~Pi~  597 (649)
T KOG0822|consen  543 SVEFKVKSNGVLHGFAGYFDAVLY--KDIFLSIEPNTHTPGMFSWFPIFFPLKQPIT  597 (649)
T ss_pred             eEEEecCCCceEeecchhhhhhhh--heeeEeeccCCCCCCceeeeeeeeeccCceE
Confidence            457888999999999999997654  458899988522   3449999999999974

>PTZ00357 methyltransferase; Provisional

Probab=93.22  E-value=0.26  Score=46.93  Aligned_cols=52  Identities=21%  Similarity=0.420  Sum_probs=39.8

Q ss_pred             cCCeEEEeccCCcEeEEEEEEEEEecCC---CceEEccCCCCCCC---ceeeeEEecc
Q psy8706         130 SSPFCLEARQDTRLNCLVGYFDTYFDLP---SPVEFSTSPISTPT---HWKQSIFLLK  181 (186)
Q Consensus       130 ~~~f~~~~~~~~~~~g~~~wFd~~F~~~---~~v~lsT~P~~~~T---HWkQt~~~l~  181 (186)
                      .....|++..++.+|||++|||...-..   ..|.|||.|.....   -|-...|.|+
T Consensus       935 ya~L~F~v~~d~vlHGFAGYFdAvLYkDVt~~~V~LSI~P~ThTpgMfSWFPIFFPLe  992 (1072)
T PTZ00357        935 AASLLFEVPPCGRCCGLAGYFSAVLYQSATAPATIIATAPVERTEDMYSWFPCVFALE  992 (1072)
T ss_pred             eEEEEEecCCCcceeeeeeEEEEEeecCCCccceEeecCCCCCCCCccceeeeEEecC
Confidence            3456788889999999999999876533   35889999964322   2998888887

>KOG1501|consensus

Probab=92.48  E-value=0.072  Score=48.07  Aligned_cols=81  Identities=16%  Similarity=0.075  Sum_probs=58.3

Q ss_pred             EecCCC-CcCCCCceEEEEecCccCCCCcceeEeecE--EEEeecCceeeEEEEEEEEEecCCCcEEEEecCCCC-----
Q psy8706          15 LTLPPD-TIVTSSSTLTSIDLNSRTTTSSCVNFSSSF--CLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPIST-----   86 (186)
Q Consensus        15 ~~v~~~-~ilt~~~~i~~~Dl~t~~~~~~dl~~~~~f--~l~~~~~~~v~g~~~wFd~~F~~~~~v~LSTsP~~~-----   86 (186)
                      +..+.+ .+|+++-.++.+|+..-    ++.++...+  ...+..+|++....+|+|+.|+.....-+..+|...     
T Consensus       228 ~~~~~ef~~Ls~~~~~F~~df~~~----~~s~s~~~~~r~~va~~Sg~~~~~l~wwdi~mD~~g~~f~~m~p~w~~~~~~  303 (636)
T KOG1501|consen  228 DAIEKEFKLLSSEGTIFYSDFPRW----IDSNSEIEELRPPVAVHSGPLRSNLLWWDISMDQFGFSFLVMQPLWTGVTIG  303 (636)
T ss_pred             hcchhhheeecCcceeEEeecchh----hhcchhhhhhcCcccccccchhheeeeeeeeeccCcceEEEecceecCCChH
Confidence            333443 47889999999998633    222222222  233456899999999999999966777888888755     


Q ss_pred             ----CcccceeEeeecC
Q psy8706          87 ----PTHWKQSIFLLKT   99 (186)
Q Consensus        87 ----~THWkQtv~~l~~   99 (186)
                          ..||.|+++|.++
T Consensus       304 ~~~~~~~weq~c~y~~~  320 (636)
T KOG1501|consen  304 NSVFGLLWEQACPYPKE  320 (636)
T ss_pred             HHHHHHHHHHhcCCChh
Confidence                5689999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	186
2fyt_A	340	Human Hmt1 Hnrnp Methyltransferase-Like 3 (S. Cerev		3e-09
2fyt_A	340	Human Hmt1 Hnrnp Methyltransferase-Like 3 (S. Cerev		4e-09
1f3l_A	321	Crystal Structure Of The Conserved Core Of Protein		4e-09
1f3l_A	321	Crystal Structure Of The Conserved Core Of Protein		4e-09
1g6q_1	328	Crystal Structure Of Yeast Arginine Methyltransfera		5e-07
1g6q_1	328	Crystal Structure Of Yeast Arginine Methyltransfera		1e-06
1orh_A	353	Structure Of The Predominant Protein Arginine Methy		1e-06
3q7e_A	349	Crystal Structure Of Rat Protein Arginine Methyltra		2e-06
1or8_A	340	Structure Of The Predominant Protein Arginine Methy		2e-06
1ori_A	343	Structure Of The Predominant Protein Arginine Methy		2e-06

>pdb|2FYT|A Chain A, Human Hmt1 Hnrnp Methyltransferase-Like 3 (S. Cerevisiae) Protein Length = 340

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 37  RTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSI 94
            TT+ S + FSS F L+  + +    + GYFD YF+    + V FST P ST THWKQ++
Sbjct: 234 HTTSISDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTV 293
Query: 95  FLLKTPITLS 104
           FLL+ P ++ 
Sbjct: 294 FLLEKPFSVK 303

>pdb|2FYT|A Chain A, Human Hmt1 Hnrnp Methyltransferase-Like 3 (S. Cerevisiae) Protein Length = 340

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 120 RTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSI 177
            TT+ S + FSS F L+  + +    + GYFD YF+    + V FST P ST THWKQ++
Sbjct: 234 HTTSISDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTV 293
Query: 178 FLLKTP 183
           FLL+ P
Sbjct: 294 FLLEKP 299

>pdb|1F3L|A Chain A, Crystal Structure Of The Conserved Core Of Protein Arginine Methyltransferase Prmt3 Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 37  RTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSI 94
            TT+ S + FSS F L   +      + GYFD YF+    + V FST P ST THWKQ+I
Sbjct: 215 HTTSISDLEFSSDFTLRTTKTAMCTAVAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTI 274
Query: 95  FLLKTP------------ITLSKVKQD 109
           FLL+ P            IT+ K K+D
Sbjct: 275 FLLEKPFPVKAGEALKGKITVHKNKKD 301

>pdb|1F3L|A Chain A, Crystal Structure Of The Conserved Core Of Protein Arginine Methyltransferase Prmt3 Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 120 RTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSI 177
            TT+ S + FSS F L   +      + GYFD YF+    + V FST P ST THWKQ+I
Sbjct: 215 HTTSISDLEFSSDFTLRTTKTAMCTAVAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTI 274
Query: 178 FLLKTP 183
           FLL+ P
Sbjct: 275 FLLEKP 280

>pdb|1G6Q|1 Chain 1, Crystal Structure Of Yeast Arginine Methyltransferase, Hmt1 Length = 328

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 38  TTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPS---PVEFSTSPISTPTHWKQSI 94
           T   S + F S+F L A++   +N +V +FD  F  P    PVEFST P +  THWKQ+I
Sbjct: 209 TVKISDLAFKSNFKLTAKRQDMINGIVTWFDIVFPAPKGKRPVEFSTGPHAPYTHWKQTI 268
Query: 95  F 95
           F
Sbjct: 269 F 269

>pdb|1G6Q|1 Chain 1, Crystal Structure Of Yeast Arginine Methyltransferase, Hmt1 Length = 328

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 121 TTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPS---PVEFSTSPISTPTHWKQSI 177
           T   S + F S F L A++   +N +V +FD  F  P    PVEFST P +  THWKQ+I
Sbjct: 209 TVKISDLAFKSNFKLTAKRQDMINGIVTWFDIVFPAPKGKRPVEFSTGPHAPYTHWKQTI 268
Query: 178 F 178
           F
Sbjct: 269 F 269

>pdb|1ORH|A Chain A, Structure Of The Predominant Protein Arginine Methyltransferase Prmt1 Length = 353

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 129 FSSPFCLEARQDTRLNCLVGYFDTYF-DLPSPVEFSTSPISTPTHWKQSIFLLK 181
           F+SPFCL+ +++  ++ LV YF+  F        FSTSP S  THWKQ++F ++
Sbjct: 249 FTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYME 302

>pdb|3Q7E|A Chain A, Crystal Structure Of Rat Protein Arginine Methyltransferase 1 (Prmt1) M48l Mutant Length = 349

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 129 FSSPFCLEARQDTRLNCLVGYFDTYF-DLPSPVEFSTSPISTPTHWKQSIFLLK 181
           F+SPFCL+ +++  ++ LV YF+  F        FSTSP S  THWKQ++F ++
Sbjct: 245 FTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYME 298

>pdb|1OR8|A Chain A, Structure Of The Predominant Protein Arginine Methyltransferase Prmt1 Length = 340

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 129 FSSPFCLEARQDTRLNCLVGYFDTYF-DLPSPVEFSTSPISTPTHWKQSIFLLK 181
           F+SPFCL+ +++  ++ LV YF+  F        FSTSP S  THWKQ++F ++
Sbjct: 236 FTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYME 289

>pdb|1ORI|A Chain A, Structure Of The Predominant Protein Arginine Methyltransferase Prmt1 Length = 343

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 129 FSSPFCLEARQDTRLNCLVGYFDTYF-DLPSPVEFSTSPISTPTHWKQSIFLLK 181
           F+SPFCL+ +++  ++ LV YF+  F        FSTSP S  THWKQ++F ++
Sbjct: 239 FTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYME 292

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	186
1g6q_1	328	HnRNP arginine N-methyltransferase; SAM-binding do	4e-23
1g6q_1	328	HnRNP arginine N-methyltransferase; SAM-binding do	6e-16
3q7e_A	349	Protein arginine N-methyltransferase 1; HET: SAH;	8e-21
3q7e_A	349	Protein arginine N-methyltransferase 1; HET: SAH;	8e-14
2fyt_A	340	Protein arginine N-methyltransferase 3; structural	5e-20
2fyt_A	340	Protein arginine N-methyltransferase 3; structural	2e-12
2y1w_A	348	Histone-arginine methyltransferase CARM1; histone	1e-15
2y1w_A	348	Histone-arginine methyltransferase CARM1; histone	2e-14
3b3j_A	480	Histone-arginine methyltransferase CARM1; protein	1e-15
3b3j_A	480	Histone-arginine methyltransferase CARM1; protein	3e-14
3r0q_C	376	Probable protein arginine N-methyltransferase 4.2;	2e-14
3r0q_C	376	Probable protein arginine N-methyltransferase 4.2;	7e-10
3ua3_A	745	Protein arginine N-methyltransferase 5; TIM-barrel	2e-07
3ua3_A	745	Protein arginine N-methyltransferase 5; TIM-barrel	9e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 Length = 328

 Score = 92.8 bits (230), Expect = 4e-23
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 8/127 (6%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
            S    L+  +  + T+  + + T+S  L   DLN  T   S + F S+F L A++   +
Sbjct: 174 YSPFVPLVLHEPIVDTVERNNVNTTSDKLIEFDLN--TVKISDLAFKSNFKLTAKRQDMI 231

Query: 61  NCLVGYFDTYFDLPS---PVEFSTSPISTPTHWKQSIFLLKTPITLSK---VKQDMDFLH 114
           N +V +FD  F  P    PVEFST P +  THWKQ+IF     +       ++ ++    
Sbjct: 232 NGIVTWFDIVFPAPKGKRPVEFSTGPHAPYTHWKQTIFYFPDDLDAETGDTIEGELVCSP 291

Query: 115 SKSLART 121
           ++   R 
Sbjct: 292 NEKNNRD 298

>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 Length = 328

 Score = 73.2 bits (179), Expect = 6e-16
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 10/90 (11%)

Query: 98  KTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLP 157
               T S    + D         T   S + F S F L A++   +N +V +FD  F  P
Sbjct: 193 NNVNTTSDKLIEFDL-------NTVKISDLAFKSNFKLTAKRQDMINGIVTWFDIVFPAP 245

Query: 158 S---PVEFSTSPISTPTHWKQSIFLLKTPI 184
               PVEFST P +  THWKQ+IF     +
Sbjct: 246 KGKRPVEFSTGPHAPYTHWKQTIFYFPDDL 275

>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* Length = 349

 Score = 87.0 bits (215), Expect = 8e-21
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS +  +   +  +  + P  +VT++  +  +D+   T     + F+S FCL+ +++  +
Sbjct: 202 MSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIY--TVKVEDLTFTSPFCLQVKRNDYV 259

Query: 61  NCLVGYFDTYFD-LPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
           + LV YF+  F        FSTSP S  THWKQ++F ++  +T+  
Sbjct: 260 HALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKT 305

>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* Length = 349

 Score = 67.4 bits (164), Expect = 8e-14
 Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 20/132 (15%)

Query: 73  LPSPVEFSTSPISTPTHWKQSIFLLKT--PITLSKVKQDM------DFLHSKSLA----- 119
            P       + I    +    I   +      +S +K         D +  K L      
Sbjct: 170 FPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACL 229

Query: 120 ------RTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFD-LPSPVEFSTSPISTPTH 172
                  T     + F+SPFCL+ +++  ++ LV YF+  F        FSTSP S  TH
Sbjct: 230 IKEVDIYTVKVEDLTFTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTH 289

Query: 173 WKQSIFLLKTPI 184
           WKQ++F ++  +
Sbjct: 290 WKQTVFYMEDYL 301

>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* Length = 340

 Score = 84.7 bits (209), Expect = 5e-20
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M + +  +  +  L P T+++    +  ID +  TT+ S + FSS F L+  + +  
Sbjct: 200 MSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCH--TTSISDLEFSSDFTLKITRTSMC 257

Query: 61  NCLVGYFDTYF--DLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
             + GYFD YF  +  + V FST P ST THWKQ++FLL+ P ++  
Sbjct: 258 TAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEKPFSVKA 304

>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* Length = 340

 Score = 63.1 bits (153), Expect = 2e-12
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 120 RTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYF--DLPSPVEFSTSPISTPTHWKQSI 177
            TT+ S + FSS F L+  + +    + GYFD YF  +  + V FST P ST THWKQ++
Sbjct: 234 HTTSISDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTV 293

Query: 178 FLLKTPI 184
           FLL+ P 
Sbjct: 294 FLLEKPF 300

>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A Length = 348

 Score = 72.7 bits (178), Expect = 1e-15
 Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 3/94 (3%)

Query: 13  QILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD 72
            + T     ++  S   T ++                F         ++ L  +FD  F 
Sbjct: 205 VVDTFDIRILMAKSVKYT-VNFLE-AKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFI 262

Query: 73  -LPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
                V  ST+P    THW Q   L ++P+    
Sbjct: 263 GSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKA 296

>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A Length = 348

 Score = 69.3 bits (169), Expect = 2e-14
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 113 LHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFD-LPSPVEFSTSPISTPT 171
            ++ +              PF         ++ L  +FD  F      V  ST+P    T
Sbjct: 220 KYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLT 279

Query: 172 HWKQSIFLLKTPI 184
           HW Q   L ++P+
Sbjct: 280 HWYQVRCLFQSPL 292

>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} Length = 480

 Score = 72.9 bits (178), Expect = 1e-15
 Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 3/94 (3%)

Query: 13  QILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD 72
            + T     ++  S   T ++                F         ++ L  +FD  F 
Sbjct: 313 VVDTFDIRILMAKSVKYT-VNFLE-AKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFI 370

Query: 73  -LPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
                V  ST+P    THW Q   L ++P+    
Sbjct: 371 GSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKA 404

>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} Length = 480

 Score = 69.0 bits (168), Expect = 3e-14
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 113 LHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFD-LPSPVEFSTSPISTPT 171
            ++ +              PF         ++ L  +FD  F      V  ST+P    T
Sbjct: 328 KYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLT 387

Query: 172 HWKQSIFLLKTPI 184
           HW Q   L ++P+
Sbjct: 388 HWYQVRCLFQSPL 400

>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} Length = 376

 Score = 69.5 bits (169), Expect = 2e-14
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 11/106 (10%)

Query: 9   YSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLE--ARQDTRLNCLVGY 66
                   L P  I+ + + +  +D    T + S +    S        + TRL    G+
Sbjct: 227 IQTAMWNDLNPQQIIGTPTIVKEMDCL--TASVSEIEEVRSNVTSVINMEHTRLCGFGGW 284

Query: 67  FDTYFD------LPSPVEFSTSPISTP-THWKQSIFLLKTPITLSK 105
           FD  F           +E +T+P     THW Q +F++  PI + +
Sbjct: 285 FDVQFSGRKEDPAQQEIELTTAPSEQHCTHWGQQVFIMSNPINVEE 330

>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} Length = 376

 Score = 56.0 bits (134), Expect = 7e-10
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 8/80 (10%)

Query: 113 LHSKSLARTTTSSCVNFSSPF-CLEARQDTRLNCLVGYFDTYFD------LPSPVEFSTS 165
           +        + S      S    +   + TRL    G+FD  F           +E +T+
Sbjct: 247 VKEMDCLTASVSEIEEVRSNVTSVINMEHTRLCGFGGWFDVQFSGRKEDPAQQEIELTTA 306

Query: 166 PISTP-THWKQSIFLLKTPI 184
           P     THW Q +F++  PI
Sbjct: 307 PSEQHCTHWGQQVFIMSNPI 326

>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A Length = 745

 Score = 48.9 bits (115), Expect = 2e-07
 Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 18  PPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPV 77
               +  ++  + + +  +   +S+    S S      ++  L    GYFD    L   V
Sbjct: 602 KYIPLAETTKPVFTFEHPNFMNSSN--ERSDSIEFVMDRNADLMGFAGYFDL--QLYKTV 657

Query: 78  EFSTSPISTPTH---WKQSIFLLKTPITLSK 105
             S  P +       W  ++  L+  + + +
Sbjct: 658 MLSIEPSTHTPGMVSWFPAVIPLRDQLRVGE 688

>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A Length = 745

 Score = 47.3 bits (111), Expect = 9e-07
 Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 16/123 (13%)

Query: 66  YFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDM-DFLHSKSLARTTTS 124
             D  +    P     + +         +  L   I L++  + +  F H         +
Sbjct: 574 DEDEMWIQKYPQGHVRNNMDQIY-----VVYLSKYIPLAETTKPVFTFEHP-----NFMN 623

Query: 125 SCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTH---WKQSIFLLK 181
           S    S        ++  L    GYFD    L   V  S  P +       W  ++  L+
Sbjct: 624 SSNERSDSIEFVMDRNADLMGFAGYFDL--QLYKTVMLSIEPSTHTPGMVSWFPAVIPLR 681

Query: 182 TPI 184
             +
Sbjct: 682 DQL 684

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 36/224 (16%), Positives = 62/224 (27%), Gaps = 100/224 (44%)

Query: 7   LIYSDVQILTLPPDTIVTSSSTLTSIDLNSRT--TT--SSCVNFSSS-----FCLEARQD 57
           L+  +VQ           ++    + +L+ +   TT      +F S+       L+    
Sbjct: 248 LVLLNVQ-----------NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 58  T-----RLNCLVGYFDT-YFDLPSPVEFSTSP-------------ISTPTHWKQ------ 92
           T       + L+ Y D    DLP  V  +T+P             ++T  +WK       
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVL-TTNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355

Query: 93  -----------------------SIFLLKTPI---TLSK---------VKQDMDFLHSKS 117
                                  S+F     I    LS          V   ++ LH  S
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415

Query: 118 LARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVE 161
           L                +E +        +     Y +L   +E
Sbjct: 416 L----------------VEKQPKES---TISIPSIYLELKVKLE 440

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	186
3q7e_A	349	Protein arginine N-methyltransferase 1; HET: SAH;	99.93
4hc4_A	376	Protein arginine N-methyltransferase 6; HRMT1L6, S	99.92
1g6q_1	328	HnRNP arginine N-methyltransferase; SAM-binding do	99.91
3r0q_C	376	Probable protein arginine N-methyltransferase 4.2;	99.9
2fyt_A	340	Protein arginine N-methyltransferase 3; structural	99.89
2y1w_A	348	Histone-arginine methyltransferase CARM1; histone	99.79
3ua3_A	745	Protein arginine N-methyltransferase 5; TIM-barrel	99.79
3b3j_A	480	Histone-arginine methyltransferase CARM1; protein	99.75
3q7e_A	349	Protein arginine N-methyltransferase 1; HET: SAH;	99.72
4gqb_A	637	Protein arginine N-methyltransferase 5; TIM barrel	99.72
4hc4_A	376	Protein arginine N-methyltransferase 6; HRMT1L6, S	99.68
1g6q_1	328	HnRNP arginine N-methyltransferase; SAM-binding do	99.65
3r0q_C	376	Probable protein arginine N-methyltransferase 4.2;	99.63
2fyt_A	340	Protein arginine N-methyltransferase 3; structural	99.61
2y1w_A	348	Histone-arginine methyltransferase CARM1; histone	99.56
3b3j_A	480	Histone-arginine methyltransferase CARM1; protein	99.48
3ua3_A	745	Protein arginine N-methyltransferase 5; TIM-barrel	99.44
4gqb_A	637	Protein arginine N-methyltransferase 5; TIM barrel	99.42
3hfn_A	72	ASL2047 protein; HFQ, SM, RNA-binding protein, sRN	84.45
3hfo_A	70	SSR3341 protein; HFQ, SM, RNA-binding protein, sRN	82.49
3hfn_A	72	ASL2047 protein; HFQ, SM, RNA-binding protein, sRN	81.13

>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*

Probab=99.93  E-value=1.3e-25  Score=192.53  Aligned_cols=133  Identities=23%  Similarity=0.457  Sum_probs=122.3

Q ss_pred             CccchhhhhcCceEEecCCCCcCCCCceEEEEecCccCCCCcceeEeecEEEEeecCceeeEEEEEEEEEec-CCCcEEE
Q psy8706           1 MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD-LPSPVEF   79 (186)
Q Consensus         1 Ms~~~~~~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~-~~~~v~L   79 (186)
                      |++|++.++.+|.|+.+++.+++++++.+.++|+.++  +.+++.+.++|++++.++|.+|||++|||+.|. ++.++.|
T Consensus       202 ~~~~~~~~~~~p~v~~~~~~~~~~~~~~~~~~dl~~~--~~~~l~~~~~~~~~~~~~~~~~g~~~~Fd~~~~~~~~~v~l  279 (349)
T 3q7e_A          202 MSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTV--KVEDLTFTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGF  279 (349)
T ss_dssp             CGGGHHHHHTSCEEECCCGGGEEEEEEEEEEEETTTC--CGGGGSEEEEEEEEBCSSEEEEEEEEEEEEECTTSSSCCEE
T ss_pred             hHHHhHhhhcCcEEEEEChhhEecccEEEEEEEcccC--chhhcceeeeEEEEEccCCEEEEEEEEEEEEecCCCCccEE
Confidence            7889999999999999999999999999999999999  999999999999999999999999999999998 4568999


Q ss_pred             EecCCCCCcccceeEeeecCeeEeecCceeeeeeeecccccccccccccccCCeEEEe
Q psy8706          80 STSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEA  137 (186)
Q Consensus        80 STsP~~~~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl~~~~~~~dl~~~~~f~~~~  137 (186)
                      ||+|.++.|||+|++|+|++|+.|++|+.|.|++.++.+..  ...+++++..+.++-
T Consensus       280 st~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~--~~r~~~~~~~~~~~~  335 (349)
T 3q7e_A          280 STSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNAK--NNRDLDFTIDLDFKG  335 (349)
T ss_dssp             ECSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSS--CSSCEEEEEEEEEEC
T ss_pred             ECCCCcCCCcceeEEEEECCceEeCCCCEEEEEEEEEECCC--CCeeEEEEEEEEeCC
Confidence            99999999999999999999999999999999999988653  566777777766653

>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}

Probab=99.92  E-value=1.8e-25  Score=194.24  Aligned_cols=131  Identities=15%  Similarity=0.288  Sum_probs=113.7

Q ss_pred             Cccchhhhh------cCceEEecCCCCcCCCCceEEEEecCccCCCCcc---eeEeecEEEEeecCceeeEEEEEEEEEe
Q psy8706           1 MSVMTRLIY------SDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSC---VNFSSSFCLEARQDTRLNCLVGYFDTYF   71 (186)
Q Consensus         1 Ms~~~~~~~------~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~d---l~~~~~f~l~~~~~~~v~g~~~wFd~~F   71 (186)
                      ||||++.+.      .+|.|+.++++++|++|+.++++|++++  +.++   +.+..+|++++.++|.+|||++|||+.|
T Consensus       220 ~s~~~~~~~~~~~~~~e~~v~~~~~~~~Ls~p~~i~~~D~~~~--~~~~~~~~~~~~~f~~~~~~~g~vhg~~~WFd~~f  297 (376)
T 4hc4_A          220 MSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRA--GLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTF  297 (376)
T ss_dssp             CGGGHHHHHHHHHSSCEEEEECCCGGGBCSCCEEEEEEETTCT--THHHHHHHCEEEEEEEECCSSEEEEEEEEEEEEEE
T ss_pred             chhhhhhhhhhhcccCceEEEeecccccccCCEEEEEEECCCC--CccccccccceeEEEEEecCCcEEEEEEEEEEEEe
Confidence            788877653      5899999999999999999999999999  8764   4688999999999999999999999999


Q ss_pred             c---CCCcEEEEecCCCCCcccceeEeeecCeeEeecCceeeeeeeecccccccccccccccCCeEE
Q psy8706          72 D---LPSPVEFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCL  135 (186)
Q Consensus        72 ~---~~~~v~LSTsP~~~~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl~~~~~~~dl~~~~~f~~  135 (186)
                      +   ++.++.|||||.+++|||+|++|+|++|+.|++|+.|.|++.+..+..  ...+++++..|++
T Consensus       298 ~~~~~~~~v~lST~P~~~~THW~Q~v~~L~~Pi~V~~G~~I~g~i~~~~~~~--n~R~~~i~i~~~~  362 (376)
T 4hc4_A          298 PGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRD--NPRRLRVLLRYKV  362 (376)
T ss_dssp             CCCC--CCEEEECCTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSS--CTTSEEEEEEEEE
T ss_pred             cCCCCCCceEEeCCCCcCCCceeeEEEEeCCceEeCCCCEEEEEEEEEECCC--CCceeEEEEEEEe
Confidence            7   456799999999999999999999999999999999999999888642  4566766666655

>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6

Probab=99.91  E-value=5.6e-24  Score=180.91  Aligned_cols=132  Identities=28%  Similarity=0.410  Sum_probs=118.6

Q ss_pred             CccchhhhhcCceEEecCCCCcCCCCceEEEEecCccCCCCcceeEeecEEEEeecCceeeEEEEEEEEEecC---CCcE
Q psy8706           1 MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDL---PSPV   77 (186)
Q Consensus         1 Ms~~~~~~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~~---~~~v   77 (186)
                      |+++++.+..+|.|+.+++.+++++|+.+.++|+.++  +.+++.+..+|++++.++|.+||+++|||+.|..   +.++
T Consensus       174 ~~~~~~~~~~~~~v~~~~~~~~ls~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~g~~~g~~~wfd~~~~~~~~~~~v  251 (328)
T 1g6q_1          174 YSPFVPLVLHEPIVDTVERNNVNTTSDKLIEFDLNTV--KISDLAFKSNFKLTAKRQDMINGIVTWFDIVFPAPKGKRPV  251 (328)
T ss_dssp             CTTHHHHHTTSCEEECCCGGGBCBCCEEEEEEETTTC--CGGGGSEEEEEEEEBCSSCEEEEEEEEEEEECCCCTTSCCC
T ss_pred             hHHHhhhhhcCCeEEEeccceeecCCEEEEEEECCCC--ChhHhceeeeEEEEEecCcEEEEEEEEEEEEcCCCCCCCce
Confidence            5678888899999999999999999999999999999  9999999999999999999999999999999973   4579


Q ss_pred             EEEecCCCCCcccceeEeeecCeeEeecCceeeeeeeecccccccccccccccCCeEEE
Q psy8706          78 EFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLE  136 (186)
Q Consensus        78 ~LSTsP~~~~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl~~~~~~~dl~~~~~f~~~  136 (186)
                      .|||+|.++.|||+|++++|++|+.|++|+.|.+++.++.+..  ...+++++..+++.
T Consensus       252 ~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~--~~r~~~~~~~~~~~  308 (328)
T 1g6q_1          252 EFSTGPHAPYTHWKQTIFYFPDDLDAETGDTIEGELVCSPNEK--NNRDLNIKISYKFE  308 (328)
T ss_dssp             EEECSTTSCCCTTCEEEEEEEEEEECCTTCEEEEEEEEEEETT--EEEEEEEEEEEEEE
T ss_pred             EEECCCCcCCCcceeEEEEeCCceecCCCCEEEEEEEEEECCC--CCceEEEEEEEEec
Confidence            9999999999999999999999999999999999999988643  35666666666554

>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}

Probab=99.90  E-value=1.3e-23  Score=181.95  Aligned_cols=133  Identities=20%  Similarity=0.295  Sum_probs=116.3

Q ss_pred             Cccchhh--------hhcCceEEecCCCCcCCCCceEEEEecCccCCCCcce-eEeecEEEEe-ecCceeeEEEEEEEEE
Q psy8706           1 MSVMTRL--------IYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCV-NFSSSFCLEA-RQDTRLNCLVGYFDTY   70 (186)
Q Consensus         1 Ms~~~~~--------~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl-~~~~~f~l~~-~~~~~v~g~~~wFd~~   70 (186)
                      |++|++.        ++.+|+++.+++.+++++|+.++++|++++  +.+++ .+.++|++++ .++|.+|||++|||+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~lt~~~~~~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~g~~~wfd~~  288 (376)
T 3r0q_C          211 MGVLTKPFAEEQEKYYIQTAMWNDLNPQQIIGTPTIVKEMDCLTA--SVSEIEEVRSNVTSVINMEHTRLCGFGGWFDVQ  288 (376)
T ss_dssp             CGGGHHHHHHHHHHHHTSBCEEECCCGGGBCBCCEEEEEEETTTC--CGGGTSEEEEEEEEBCSCSCEEEEEEEEEEEEE
T ss_pred             hHHHHhhhhhhhhhhcccCceEEEEChHHccCCCeEEEEEEcCcC--CHHHhcccccceEEEEeccCceEEEEEEEEEEE
Confidence            5667665        679999999999999999999999999999  99999 4999999999 9999999999999999


Q ss_pred             ecC------CCcEEEEecCC-CCCcccceeEeeecCeeEeecCceeeeeeeecccccccccccccccCCeEEEe
Q psy8706          71 FDL------PSPVEFSTSPI-STPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLEA  137 (186)
Q Consensus        71 F~~------~~~v~LSTsP~-~~~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl~~~~~~~dl~~~~~f~~~~  137 (186)
                      |.+      +.++.|||||. .+.|||+|++++|++|+.|++|+.|.|++.+..+..  ...+++++..+.++-
T Consensus       289 ~~~~~~~~~~~~v~lSt~P~~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~--~~r~~~~~~~~~~~~  360 (376)
T 3r0q_C          289 FSGRKEDPAQQEIELTTAPSEQHCTHWGQQVFIMSNPINVEEGDNLNLGLLMSRSKE--NHRLMEIELNCEIKE  360 (376)
T ss_dssp             EEEETTEEEEEEEEEECCCCSSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSS--CTTSEEEEEEEEEEC
T ss_pred             ecCCccCCCCCccEEECCCCcCCCCceeeEEEEECCceecCCCCEEEEEEEEEECCC--CCeeEEEEEEEEecC
Confidence            962      34699999999 579999999999999999999999999999988642  355777766666653

>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*

Probab=99.89  E-value=8.6e-23  Score=174.60  Aligned_cols=127  Identities=28%  Similarity=0.505  Sum_probs=114.2

Q ss_pred             CccchhhhhcCceEEecCCCCcCCCCceEEEEecCccCCCCcceeEeecEEEEeecCceeeEEEEEEEEEe-c-CCCcEE
Q psy8706           1 MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYF-D-LPSPVE   78 (186)
Q Consensus         1 Ms~~~~~~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F-~-~~~~v~   78 (186)
                      |+++++.++.+|.++.+++.+++++|+.+.++|+.++  +.+++.|..+|.+++.++|.+||+++|||+.| + +.+++.
T Consensus       200 ~~~~~~~~~~~~~v~~~~~~~~ls~p~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~wfd~~~~~~~~~~v~  277 (340)
T 2fyt_A          200 MSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCHTT--SISDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVV  277 (340)
T ss_dssp             CGGGHHHHTTBCEEECCCGGGBCBCCEEEEEEETTTC--CGGGGSEEEEEEEEBCSCEEEEEEEEEEEEEECTTCSSCEE
T ss_pred             hHHHHHhhhcCcEEEEechhhcccCCEEEEEEECCCC--cccccceEeeEEEEEccCcEEEEEEEEEEEEeecCCCCCEE
Confidence            5678888899999999999999999999999999999  99999999999999999999999999999999 3 557899


Q ss_pred             EEecCCCCCcccceeEeeecCeeEeecCceeeeeeeecccccccccccccccC
Q psy8706          79 FSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSS  131 (186)
Q Consensus        79 LSTsP~~~~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl~~~~~~~dl~~~~  131 (186)
                      |||+|.++.|||+|++++|++|+.|++|+.|.+++.++.+..  ...+++++.
T Consensus       278 lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~--~~r~~~~~~  328 (340)
T 2fyt_A          278 FSTGPQSTKTHWKQTVFLLEKPFSVKAGEALKGKVTVHKNKK--DPRSLTVTL  328 (340)
T ss_dssp             EECSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSS--CTTSEEEEE
T ss_pred             EECCCCcCCCccccEEEEeCCceEcCCCCEEEEEEEEEECCC--CCceEEEEE
Confidence            999999999999999999999999999999999998887642  345555443

>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A

Probab=99.79  E-value=6.3e-19  Score=150.84  Aligned_cols=107  Identities=16%  Similarity=0.158  Sum_probs=93.6

Q ss_pred             hcCceEEecCCCCcCCCCceEEEEecCccCCCCcce-eEeecEEEEeecCceeeEEEEEEEEEec-CCCcEEEEecCCCC
Q psy8706           9 YSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCV-NFSSSFCLEARQDTRLNCLVGYFDTYFD-LPSPVEFSTSPIST   86 (186)
Q Consensus         9 ~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl-~~~~~f~l~~~~~~~v~g~~~wFd~~F~-~~~~v~LSTsP~~~   86 (186)
                      +.+|.++..+..... .+.....+|+.++  +.+++ .+..+|++++.++|.+|||++|||+.|. ++..+.|||+|..+
T Consensus       201 f~~p~~d~~~~~~~~-~~~~~~~~df~~~--~~~~~~~~~~~~~~~~~~~g~~~g~~~wfd~~~~~~~~~v~lSt~P~~~  277 (348)
T 2y1w_A          201 FRQPVVDTFDIRILM-AKSVKYTVNFLEA--KEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEP  277 (348)
T ss_dssp             HTSCEEECCCGGGBC-BCCEEEEEETTTC--CGGGGSEEEEEEEEEBSSCEEEEEEEEEEEEEEECSSCEEEEECCTTSC
T ss_pred             ccCCeEEeECCeeec-CcceEEEEECCcC--ChHHhceeeeeEEEEEccCcEEEEEEEEEEEEEcCCCCceEEECCCCcC
Confidence            578999887765444 4444568899999  88888 5889999999999999999999999998 45579999999999


Q ss_pred             CcccceeEeeecCeeEeecCceeeeeeeeccc
Q psy8706          87 PTHWKQSIFLLKTPITLSKVKQDMDFLHSKSL  118 (186)
Q Consensus        87 ~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl  118 (186)
                      .|||+|++++|++|+.|++|+.|.|++.++.+
T Consensus       278 ~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~  309 (348)
T 2y1w_A          278 LTHWYQVRCLFQSPLFAKAGDTLSGTCLLIAN  309 (348)
T ss_dssp             CCTTCEEEEEEEEEEEECTTCEEEEEEEEEEC
T ss_pred             CCeeeeEEEeeCCceEeCCCCEEEEEEEEEEC
Confidence            99999999999999999999999999987764

>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A

Probab=99.79  E-value=4.7e-19  Score=163.13  Aligned_cols=110  Identities=14%  Similarity=0.169  Sum_probs=102.6

Q ss_pred             ccchhhhhcCceEEecCCCCcCCC-CceEEEEecCccCCCCcceeEeecEEEEeecCceeeEEEEEEEEEecCCCcEEEE
Q psy8706           2 SVMTRLIYSDVQILTLPPDTIVTS-SSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFS   80 (186)
Q Consensus         2 s~~~~~~~~ep~v~~v~~~~ilt~-~~~i~~~Dl~t~~~~~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~~~~~v~LS   80 (186)
                      +|+++.++.+|+|..+.+.++|++ ++.+++||+.+.  +.++..+.++|++++.++|.+|||++|||+.|.  ..|.||
T Consensus       585 ~~~~~~a~e~PyVv~l~~~~~Ls~~pq~vftFdhp~~--~~~d~~r~~~~~F~~~r~g~iHGfagwFDi~Ly--k~V~LS  660 (745)
T 3ua3_A          585 QGHVRNNMDQIYVVYLSKYIPLAETTKPVFTFEHPNF--MNSSNERSDSIEFVMDRNADLMGFAGYFDLQLY--KTVMLS  660 (745)
T ss_dssp             TCHHHHHHSSCEEECCCSCEESSSSCEEEEEEESSCT--TCCCSCEEEEEEEECCSSEEEEEEEEEEEEEEE--TTEEEE
T ss_pred             cccccccccccEEEeeccceecCCCCceEEEEECCCC--CccccceeEEEEEEeCCCcEEEEEEEEEEEEec--CCcEEe
Confidence            456888899999999999999999 999999999999  888889999999999999999999999999998  679999


Q ss_pred             ecCCCC---CcccceeEeeecCeeEeecCceeeeeeee
Q psy8706          81 TSPIST---PTHWKQSIFLLKTPITLSKVKQDMDFLHS  115 (186)
Q Consensus        81 TsP~~~---~THWkQtv~~l~~p~~v~~g~~I~g~v~~  115 (186)
                      |+|.++   .|||+|++|+|++|+.|++|+.|.+.+.-
T Consensus       661 T~P~t~s~~mThWfQtfFPL~ePL~V~~GdeI~g~~~R  698 (745)
T 3ua3_A          661 IEPSTHTPGMVSWFPAVIPLRDQLRVGEGDRISLKIDR  698 (745)
T ss_dssp             CSSTTCCTTCCSCCCEEEEEEEEEEECTTCEEEEEEEE
T ss_pred             cCCCCCCCCCccceeEEEecCCceEeCCCCEEEEEEEE
Confidence            999876   68999999999999999999999998744

>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}

Probab=99.75  E-value=5.6e-18  Score=151.16  Aligned_cols=107  Identities=16%  Similarity=0.161  Sum_probs=95.6

Q ss_pred             hcCceEEecCCCCcCCCCceEEEEecCccCCCCcce-eEeecEEEEeecCceeeEEEEEEEEEec-CCCcEEEEecCCCC
Q psy8706           9 YSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCV-NFSSSFCLEARQDTRLNCLVGYFDTYFD-LPSPVEFSTSPIST   86 (186)
Q Consensus         9 ~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl-~~~~~f~l~~~~~~~v~g~~~wFd~~F~-~~~~v~LSTsP~~~   86 (186)
                      +.+|+++..+.....+++.. ..+|+.+.  +.+++ .+..+|++++.++|.+|||++|||+.|+ +...+.|||+|..+
T Consensus       309 f~~pvvd~~~~~~~y~~tl~-~~~d~~~~--~~~~l~~~~~~~~~~~~~~g~~hg~~~wFd~~~~~~~~~v~lST~P~~~  385 (480)
T 3b3j_A          309 FRQPVVDTFDIRILMAKSVK-YTVNFLEA--KEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEP  385 (480)
T ss_dssp             TTSCEECCCCSTTBCSCCEE-EEEETTTC--CTTTTTEEEEEEEEECSSCEEEEEEEEEEEEEEECSSCEEESSSCCSSS
T ss_pred             cCCcEEEEeecccccchhhh-hhhhhhcC--ChhhhcceeeeEEEEEccCcEEEEEEEEEEEEEcCCCCceEEeCCCCcC
Confidence            67799988888777766654 58999999  88888 5889999999999999999999999998 45579999999999


Q ss_pred             CcccceeEeeecCeeEeecCceeeeeeeeccc
Q psy8706          87 PTHWKQSIFLLKTPITLSKVKQDMDFLHSKSL  118 (186)
Q Consensus        87 ~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl  118 (186)
                      .|||+|++++|++|+.|++|+.|.|.+.++.+
T Consensus       386 ~thW~q~~~~l~~p~~v~~g~~i~g~~~~~~~  417 (480)
T 3b3j_A          386 LTHWYQVRCLFQSPLFAKAGDTLSGTCLLIAN  417 (480)
T ss_dssp             CCCSEEEEEEEEEEEEECTTCEEEEEEEEEEC
T ss_pred             CCeeeeEEEEeCCceEeCCCCEEEEEEEEEEC
Confidence            99999999999999999999999999988765

>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*

Probab=99.72  E-value=4.6e-18  Score=145.59  Aligned_cols=80  Identities=31%  Similarity=0.534  Sum_probs=66.9

Q ss_pred             Cceeeeeeeeccc-ccccccccccccCCeEEEeccCCcEeEEEEEEEEEecC-CCceEEccCCCCCCCceeeeEEeccCC
Q psy8706         106 VKQDMDFLHSKSL-ARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDL-PSPVEFSTSPISTPTHWKQSIFLLKTP  183 (186)
Q Consensus       106 g~~I~g~v~~~dl-~~~~~~~dl~~~~~f~~~~~~~~~~~g~~~wFd~~F~~-~~~v~lsT~P~~~~THWkQt~~~l~~p  183 (186)
                      .+.+.-......+ ..+++.+||.|..+|++++.++|.+|||++|||+.|.+ +.+|.|||||.++.|||||++|+|++|
T Consensus       221 ~~~~~~~~~~~~~dl~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~Fd~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p  300 (349)
T 3q7e_A          221 KQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDY  300 (349)
T ss_dssp             GGEEEEEEEEEEEETTTCCGGGGSEEEEEEEEBCSSEEEEEEEEEEEEECTTSSSCCEEECSTTSCCCTTCEEEEEEEEE
T ss_pred             hhEecccEEEEEEEcccCchhhcceeeeEEEEEccCCEEEEEEEEEEEEecCCCCccEEECCCCcCCCcceeEEEEECCc
Confidence            3334333333333 34688999999999999999999999999999999985 568999999999999999999999998


Q ss_pred             CC
Q psy8706         184 IG  185 (186)
Q Consensus       184 ~~  185 (186)
                      +.
T Consensus       301 ~~  302 (349)
T 3q7e_A          301 LT  302 (349)
T ss_dssp             EE
T ss_pred             eE
Confidence            74

>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*

Probab=99.72  E-value=2.2e-17  Score=151.44  Aligned_cols=104  Identities=16%  Similarity=0.207  Sum_probs=93.2

Q ss_pred             hhcCceEEecCCCCcCCCCceEEEEecCccCCCC-cceeEeecEEEEeecCceeeEEEEEEEEEecCCCcEEEEecCCC-
Q psy8706           8 IYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTS-SCVNFSSSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPIS-   85 (186)
Q Consensus         8 ~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~-~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~~~~~v~LSTsP~~-   85 (186)
                      .+.+|.|..+++.+++++++.++++|+.+.  .. ++..+..+|++++.++|.+|||++|||+.|.  +.+.|||+|.. 
T Consensus       497 ~~~~p~Vv~~~~~~~Ls~p~~~~~fd~~~~--~~~~~~~~~~~~~f~i~~~g~vhGf~~wFD~~f~--~~V~LST~P~~~  572 (637)
T 4gqb_A          497 QFEMPYVVRLHNFHQLSAPQPCFTFSHPNR--DPMIDNNRYCTLEFPVEVNTVLHGFAGYFETVLY--QDITLSIRPETH  572 (637)
T ss_dssp             GGGSCEECBCCSCEECSCCEEEEEEESSCC--STTCCCCEEEEEEEECCSCEEEEEEEEEEEEEEE--TTEEEECSGGGC
T ss_pred             hcCCcEEEEecCccccCCCEEEEEEECCCC--CccccceEEEEEEEEecCCcEEEEEEEEEEEEee--CCeEEECCCCCC
Confidence            468899999999999999999999999776  44 3457889999999999999999999999998  77999999973 


Q ss_pred             --CCcccceeEeeecCeeEeecCceeeeeeee
Q psy8706          86 --TPTHWKQSIFLLKTPITLSKVKQDMDFLHS  115 (186)
Q Consensus        86 --~~THWkQtv~~l~~p~~v~~g~~I~g~v~~  115 (186)
                        +.|||+|++|+|++|+.|++|+.|++++..
T Consensus       573 s~~~THW~Q~vfpL~~Pl~V~~Gd~I~~~~~R  604 (637)
T 4gqb_A          573 SPGMFSWFPILFPIKQPITVREGQTICVRFWR  604 (637)
T ss_dssp             CTTCCSCCCEEEEEEEEEEECTTCEEEEEEEE
T ss_pred             CCCCCcccCeEEEeCCCeEECCCCEEEEEEEE
Confidence              469999999999999999999999998753

>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}

Probab=99.68  E-value=2.4e-17  Score=143.14  Aligned_cols=72  Identities=22%  Similarity=0.400  Sum_probs=60.0

Q ss_pred             eeecccccccccc---cccccCCeEEEeccCCcEeEEEEEEEEEecC---CCceEEccCCCCCCCceeeeEEeccCCCC
Q psy8706         113 LHSKSLARTTTSS---CVNFSSPFCLEARQDTRLNCLVGYFDTYFDL---PSPVEFSTSPISTPTHWKQSIFLLKTPIG  185 (186)
Q Consensus       113 v~~~dl~~~~~~~---dl~~~~~f~~~~~~~~~~~g~~~wFd~~F~~---~~~v~lsT~P~~~~THWkQt~~~l~~p~~  185 (186)
                      +...|+. +++.+   ++.|..+|++++.++|.+|||++|||+.|.+   +++|.|||||.+|+|||||++|+|++|+.
T Consensus       254 i~~~D~~-~~~~~~~~~~~~~~~f~~~~~~~g~vhg~~~WFd~~f~~~~~~~~v~lST~P~~~~THW~Q~v~~L~~Pi~  331 (376)
T 4hc4_A          254 FAQLELS-RAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQ  331 (376)
T ss_dssp             EEEEETT-CTTHHHHHHHCEEEEEEEECCSSEEEEEEEEEEEEEECCCC--CCEEEECCTTSCCCTTCEEEEEEEEEEE
T ss_pred             EEEEECC-CCCccccccccceeEEEEEecCCcEEEEEEEEEEEEecCCCCCCceEEeCCCCcCCCceeeEEEEeCCceE
Confidence            3344444 45655   3468889999999999999999999999974   46899999999999999999999999974

>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6

Probab=99.65  E-value=1.4e-16  Score=135.29  Aligned_cols=72  Identities=39%  Similarity=0.600  Sum_probs=63.0

Q ss_pred             eeecccccccccccccccCCeEEEeccCCcEeEEEEEEEEEecC---CCceEEccCCCCCCCceeeeEEeccCCCC
Q psy8706         113 LHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDL---PSPVEFSTSPISTPTHWKQSIFLLKTPIG  185 (186)
Q Consensus       113 v~~~dl~~~~~~~dl~~~~~f~~~~~~~~~~~g~~~wFd~~F~~---~~~v~lsT~P~~~~THWkQt~~~l~~p~~  185 (186)
                      +...|+. +++.++++|..+|+++++++|.+|||++|||+.|..   +.++.|||||.++.|||||++|+|++|+.
T Consensus       202 ~~~~d~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~wfd~~~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~  276 (328)
T 1g6q_1          202 LIEFDLN-TVKISDLAFKSNFKLTAKRQDMINGIVTWFDIVFPAPKGKRPVEFSTGPHAPYTHWKQTIFYFPDDLD  276 (328)
T ss_dssp             EEEEETT-TCCGGGGSEEEEEEEEBCSSCEEEEEEEEEEEECCCCTTSCCCEEECSTTSCCCTTCEEEEEEEEEEE
T ss_pred             EEEEECC-CCChhHhceeeeEEEEEecCcEEEEEEEEEEEEcCCCCCCCceEEECCCCcCCCcceeEEEEeCCcee
Confidence            3334444 577899999999999999999999999999999974   45899999999999999999999999863

>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}

Probab=99.63  E-value=1.5e-16  Score=137.58  Aligned_cols=89  Identities=26%  Similarity=0.388  Sum_probs=68.9

Q ss_pred             ecCee-E-eecCceeeeeeeeccc-cccccccccc-ccCCeEEEe-ccCCcEeEEEEEEEEEecC------CCceEEccC
Q psy8706          97 LKTPI-T-LSKVKQDMDFLHSKSL-ARTTTSSCVN-FSSPFCLEA-RQDTRLNCLVGYFDTYFDL------PSPVEFSTS  165 (186)
Q Consensus        97 l~~p~-~-v~~g~~I~g~v~~~dl-~~~~~~~dl~-~~~~f~~~~-~~~~~~~g~~~wFd~~F~~------~~~v~lsT~  165 (186)
                      +.+|+ . +.+.+.++-......+ .++++.+|+. |+++|++++ .++|.+|||++|||+.|.+      +++|.||||
T Consensus       227 ~~~p~~~~~~~~~~lt~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~wfd~~~~~~~~~~~~~~v~lSt~  306 (376)
T 3r0q_C          227 IQTAMWNDLNPQQIIGTPTIVKEMDCLTASVSEIEEVRSNVTSVINMEHTRLCGFGGWFDVQFSGRKEDPAQQEIELTTA  306 (376)
T ss_dssp             TSBCEEECCCGGGBCBCCEEEEEEETTTCCGGGTSEEEEEEEEBCSCSCEEEEEEEEEEEEEEEEETTEEEEEEEEEECC
T ss_pred             ccCceEEEEChHHccCCCeEEEEEEcCcCCHHHhcccccceEEEEeccCceEEEEEEEEEEEecCCccCCCCCccEEECC
Confidence            34554 2 2444444443444433 3468889996 999999999 9999999999999999963      247999999


Q ss_pred             CC-CCCCceeeeEEeccCCCC
Q psy8706         166 PI-STPTHWKQSIFLLKTPIG  185 (186)
Q Consensus       166 P~-~~~THWkQt~~~l~~p~~  185 (186)
                      |. .+.|||||++|+|++|+.
T Consensus       307 P~~~~~thW~q~~~~l~~p~~  327 (376)
T 3r0q_C          307 PSEQHCTHWGQQVFIMSNPIN  327 (376)
T ss_dssp             CCSSCCCTTCEEEEEEEEEEE
T ss_pred             CCcCCCCceeeEEEEECCcee
Confidence            99 579999999999999873

>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*

Probab=99.61  E-value=6.8e-16  Score=131.72  Aligned_cols=70  Identities=43%  Similarity=0.702  Sum_probs=61.8

Q ss_pred             ecccccccccccccccCCeEEEeccCCcEeEEEEEEEEEe-c-CCCceEEccCCCCCCCceeeeEEeccCCCC
Q psy8706         115 SKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYF-D-LPSPVEFSTSPISTPTHWKQSIFLLKTPIG  185 (186)
Q Consensus       115 ~~dl~~~~~~~dl~~~~~f~~~~~~~~~~~g~~~wFd~~F-~-~~~~v~lsT~P~~~~THWkQt~~~l~~p~~  185 (186)
                      ..++. +++.+++.|..+|.+++.++|.+|||++|||+.| + +..++.|||||.++.|||||++|+|++|+.
T Consensus       230 ~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~wfd~~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~  301 (340)
T 2fyt_A          230 HIDCH-TTSISDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEKPFS  301 (340)
T ss_dssp             EEETT-TCCGGGGSEEEEEEEEBCSCEEEEEEEEEEEEEECTTCSSCEEEECSTTSCCCTTCEEEEEEEEEEE
T ss_pred             EEECC-CCcccccceEeeEEEEEccCcEEEEEEEEEEEEeecCCCCCEEEECCCCcCCCccccEEEEeCCceE
Confidence            34433 5678889999999999999999999999999999 4 457899999999999999999999999863

>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A

Probab=99.56  E-value=2.2e-15  Score=128.81  Aligned_cols=70  Identities=23%  Similarity=0.312  Sum_probs=60.9

Q ss_pred             eccccccccccccc-ccCCeEEEeccCCcEeEEEEEEEEEecC-CCceEEccCCCCCCCceeeeEEeccCCCC
Q psy8706         115 SKSLARTTTSSCVN-FSSPFCLEARQDTRLNCLVGYFDTYFDL-PSPVEFSTSPISTPTHWKQSIFLLKTPIG  185 (186)
Q Consensus       115 ~~dl~~~~~~~dl~-~~~~f~~~~~~~~~~~g~~~wFd~~F~~-~~~v~lsT~P~~~~THWkQt~~~l~~p~~  185 (186)
                      +.++. +.+.+|+. +..+|++++.++|.+|||++|||+.|.+ ++.|.|||||.++.|||||++|+|++|+.
T Consensus       222 ~~df~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~wfd~~~~~~~~~v~lSt~P~~~~thW~q~~~~l~~p~~  293 (348)
T 2y1w_A          222 TVNFL-EAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLF  293 (348)
T ss_dssp             EEETT-TCCGGGGSEEEEEEEEEBSSCEEEEEEEEEEEEEEECSSCEEEEECCTTSCCCTTCEEEEEEEEEEE
T ss_pred             EEECC-cCChHHhceeeeeEEEEEccCcEEEEEEEEEEEEEcCCCCceEEECCCCcCCCeeeeEEEeeCCceE
Confidence            34544 46677874 8899999999999999999999999985 56899999999999999999999999963

>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}

Probab=99.48  E-value=1.8e-14  Score=128.45  Aligned_cols=70  Identities=23%  Similarity=0.312  Sum_probs=60.5

Q ss_pred             eccccccccccccc-ccCCeEEEeccCCcEeEEEEEEEEEecC-CCceEEccCCCCCCCceeeeEEeccCCCC
Q psy8706         115 SKSLARTTTSSCVN-FSSPFCLEARQDTRLNCLVGYFDTYFDL-PSPVEFSTSPISTPTHWKQSIFLLKTPIG  185 (186)
Q Consensus       115 ~~dl~~~~~~~dl~-~~~~f~~~~~~~~~~~g~~~wFd~~F~~-~~~v~lsT~P~~~~THWkQt~~~l~~p~~  185 (186)
                      ..++. +.+.+|+. +..+|++++.++|.+|||++|||+.|.+ ++.+.|||||.++.|||||++|+|++|+.
T Consensus       330 ~~d~~-~~~~~~l~~~~~~~~~~~~~~g~~hg~~~wFd~~~~~~~~~v~lST~P~~~~thW~q~~~~l~~p~~  401 (480)
T 3b3j_A          330 TVNFL-EAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLF  401 (480)
T ss_dssp             EEETT-TCCTTTTTEEEEEEEEECSSCEEEEEEEEEEEEEEECSSCEEESSSCCSSSCCCSEEEEEEEEEEEE
T ss_pred             hhhhh-cCChhhhcceeeeEEEEEccCcEEEEEEEEEEEEEcCCCCceEEeCCCCcCCCeeeeEEEEeCCceE
Confidence            34443 46677875 7899999999999999999999999984 56799999999999999999999999963

>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A

Probab=99.44  E-value=8.3e-14  Score=128.46  Aligned_cols=87  Identities=17%  Similarity=0.195  Sum_probs=66.6

Q ss_pred             ecCeeE--eecCceeee-eeeeccc-ccccccccccccCCeEEEeccCCcEeEEEEEEEEEecCCCceEEccCCCCC---
Q psy8706          97 LKTPIT--LSKVKQDMD-FLHSKSL-ARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPIST---  169 (186)
Q Consensus        97 l~~p~~--v~~g~~I~g-~v~~~dl-~~~~~~~dl~~~~~f~~~~~~~~~~~g~~~wFd~~F~~~~~v~lsT~P~~~---  169 (186)
                      +++|+-  +..-..+.. ...+..+ ..+.+++|+++..+|+|+++++|.+|||++|||+.|.+  .|.|||+|..+   
T Consensus       592 ~e~PyVv~l~~~~~Ls~~pq~vftFdhp~~~~~d~~r~~~~~F~~~r~g~iHGfagwFDi~Lyk--~V~LST~P~t~s~~  669 (745)
T 3ua3_A          592 MDQIYVVYLSKYIPLAETTKPVFTFEHPNFMNSSNERSDSIEFVMDRNADLMGFAGYFDLQLYK--TVMLSIEPSTHTPG  669 (745)
T ss_dssp             HSSCEEECCCSCEESSSSCEEEEEEESSCTTCCCSCEEEEEEEECCSSEEEEEEEEEEEEEEET--TEEEECSSTTCCTT
T ss_pred             ccccEEEeeccceecCCCCceEEEEECCCCCccccceeEEEEEEeCCCcEEEEEEEEEEEEecC--CcEEecCCCCCCCC
Confidence            445552  233333443 3333333 22456778999999999999999999999999999984  69999999987   


Q ss_pred             CCceeeeEEeccCCCC
Q psy8706         170 PTHWKQSIFLLKTPIG  185 (186)
Q Consensus       170 ~THWkQt~~~l~~p~~  185 (186)
                      .|||||++|+|++|+.
T Consensus       670 mThWfQtfFPL~ePL~  685 (745)
T 3ua3_A          670 MVSWFPAVIPLRDQLR  685 (745)
T ss_dssp             CCSCCCEEEEEEEEEE
T ss_pred             CccceeEEEecCCceE
Confidence            6899999999999873

>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*

Probab=99.42  E-value=1.1e-13  Score=126.87  Aligned_cols=127  Identities=20%  Similarity=0.235  Sum_probs=85.4

Q ss_pred             CceeeEEEEEEEEEec------------------CCCcEEEEecCCCCCcccceeEee----------ecCeeE--eecC
Q psy8706          57 DTRLNCLVGYFDTYFD------------------LPSPVEFSTSPISTPTHWKQSIFL----------LKTPIT--LSKV  106 (186)
Q Consensus        57 ~~~v~g~~~wFd~~F~------------------~~~~v~LSTsP~~~~THWkQtv~~----------l~~p~~--v~~g  106 (186)
                      |.+|+.++|+|...-.                  -|+...+..+|...+..|.+...+          ++.|+.  +..-
T Consensus       430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiPs~atlyiapi~~~~l~~e~~~~~~~~~~~~~~~~~p~Vv~~~~~  509 (637)
T 4gqb_A          430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNEVRACREKDRDPEAQFEMPYVVRLHNF  509 (637)
T ss_dssp             EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEESCEEEEEEEEEECHHHHHHHHTTCCTTSCTTGGGGSCEECBCCSC
T ss_pred             CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEccccceEEEEEecCHHHHHHHHhcccccccchhhcCCcEEEEecCc
Confidence            6789999998865221                  135556666675444444433222          334442  2223


Q ss_pred             ceeeeeeee--cccccccccccccccCCeEEEeccCCcEeEEEEEEEEEecCCCceEEccCCCC---CCCceeeeEEecc
Q psy8706         107 KQDMDFLHS--KSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPIS---TPTHWKQSIFLLK  181 (186)
Q Consensus       107 ~~I~g~v~~--~dl~~~~~~~dl~~~~~f~~~~~~~~~~~g~~~wFd~~F~~~~~v~lsT~P~~---~~THWkQt~~~l~  181 (186)
                      ..+.....+  .+.......++.++..+|+|++.++|.+|||++|||+.|.+  .|.|||+|..   +.|||+|++|+|+
T Consensus       510 ~~Ls~p~~~~~fd~~~~~~~~~~~~~~~~~f~i~~~g~vhGf~~wFD~~f~~--~V~LST~P~~~s~~~THW~Q~vfpL~  587 (637)
T 4gqb_A          510 HQLSAPQPCFTFSHPNRDPMIDNNRYCTLEFPVEVNTVLHGFAGYFETVLYQ--DITLSIRPETHSPGMFSWFPILFPIK  587 (637)
T ss_dssp             EECSCCEEEEEEESSCCSTTCCCCEEEEEEEECCSCEEEEEEEEEEEEEEET--TEEEECSGGGCCTTCCSCCCEEEEEE
T ss_pred             cccCCCEEEEEEECCCCCccccceEEEEEEEEecCCcEEEEEEEEEEEEeeC--CeEEECCCCCCCCCCCcccCeEEEeC
Confidence            333333222  33333334456789999999999999999999999999974  5999999974   5699999999999


Q ss_pred             CCCC
Q psy8706         182 TPIG  185 (186)
Q Consensus       182 ~p~~  185 (186)
                      +|+.
T Consensus       588 ~Pl~  591 (637)
T 4gqb_A          588 QPIT  591 (637)
T ss_dssp             EEEE
T ss_pred             CCeE
Confidence            9974

>3hfn_A ASL2047 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 2.31A {Nostoc SP}

Probab=84.45  E-value=0.65  Score=30.53  Aligned_cols=46  Identities=22%  Similarity=0.265  Sum_probs=32.4

Q ss_pred             CCeEEEeccCCcEeEEEEEEEEEecCCCceEEccCCCCCCCceeeeEEecc
Q psy8706         131 SPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLK  181 (186)
Q Consensus       131 ~~f~~~~~~~~~~~g~~~wFd~~F~~~~~v~lsT~P~~~~THWkQt~~~l~  181 (186)
                      .+.+++....+.+.|-+.|+|-+|     +-|..+=..+-.-|||.+-|+.
T Consensus        24 ~~V~I~L~tGd~l~G~i~WQD~~c-----l~L~~~~~~~~LI~R~AI~~Ik   69 (72)
T 3hfn_A           24 APVEIKLVTGDAITGRVLWQDPTC-----VCIADENSRQTTIWKQAIAYLQ   69 (72)
T ss_dssp             CEEEEEETTSCEEEEEEEEECSSE-----EEEEC---CEEEEEGGGEEEEE
T ss_pred             ceEEEEecCCCEEEEEEEEECCCE-----EEEEcCCCCeEEEEeeeeEEEE
Confidence            456777778899999999999888     3344322334556999888774

>3hfo_A SSR3341 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 1.30A {Synechocystis SP}

Probab=82.49  E-value=1.1  Score=29.34  Aligned_cols=46  Identities=11%  Similarity=0.060  Sum_probs=33.1

Q ss_pred             CCeEEEeccCCcEeEEEEEEEEEecCCCceEEccCCCCCCCceeeeEEecc
Q psy8706         131 SPFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLK  181 (186)
Q Consensus       131 ~~f~~~~~~~~~~~g~~~wFd~~F~~~~~v~lsT~P~~~~THWkQt~~~l~  181 (186)
                      .+.+++......+.|-+.|||-+|     +-|..+=..+-.-|||.+-|+.
T Consensus        22 ~~V~I~L~tG~~l~G~i~WQD~~c-----l~L~~~~~~~~LI~r~AI~~I~   67 (70)
T 3hfo_A           22 TPVEIKLLTGDSLFGTIRWQDTDG-----LGLVDDSERSTIVRLAAIAYIT   67 (70)
T ss_dssp             CEEEEEETTSCEEEEEEEEECSSE-----EEEECTTCCEEEEEGGGEEEEE
T ss_pred             ceEEEEecCCCEEEEEEEEeCCCE-----EEEEcCCCCeEEEEeeeeEEEe
Confidence            466777778899999999999887     4444322234456898887764

>3hfn_A ASL2047 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 2.31A {Nostoc SP}

Probab=81.13  E-value=1.4  Score=28.94  Aligned_cols=46  Identities=20%  Similarity=0.213  Sum_probs=33.1

Q ss_pred             ecEEEEeecCceeeEEEEEEEEEecCCCcEEEEecCCCCCcccceeEeeec
Q psy8706          48 SSFCLEARQDTRLNCLVGYFDTYFDLPSPVEFSTSPISTPTHWKQSIFLLK   98 (186)
Q Consensus        48 ~~f~l~~~~~~~v~g~~~wFd~~F~~~~~v~LSTsP~~~~THWkQtv~~l~   98 (186)
                      .+.+++...+..+.|-..|+|-+|     +.|..+-..+..-|||++.++.
T Consensus        24 ~~V~I~L~tGd~l~G~i~WQD~~c-----l~L~~~~~~~~LI~R~AI~~Ik   69 (72)
T 3hfn_A           24 APVEIKLVTGDAITGRVLWQDPTC-----VCIADENSRQTTIWKQAIAYLQ   69 (72)
T ss_dssp             CEEEEEETTSCEEEEEEEEECSSE-----EEEEC---CEEEEEGGGEEEEE
T ss_pred             ceEEEEecCCCEEEEEEEEECCCE-----EEEEcCCCCeEEEEeeeeEEEE
Confidence            345677778889999999999976     4565543455677999988864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	186
d1oria_	316	c.66.1.6 (A:) Protein arginine N-methyltransferase	2e-22
d1oria_	316	c.66.1.6 (A:) Protein arginine N-methyltransferase	2e-15
d1g6q1_	328	c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Ba	2e-20
d1g6q1_	328	c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Ba	4e-16
d2fyta1	311	c.66.1.6 (A:238-548) Protein arginine N-methyltran	8e-20
d2fyta1	311	c.66.1.6 (A:238-548) Protein arginine N-methyltran	2e-14

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 316

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 89.5 bits (221), Expect = 2e-22
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS +  +   +  +  + P  +VT++  +  +D+   T     + F+S FCL+ +++  +
Sbjct: 169 MSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIY--TVKVEDLTFTSPFCLQVKRNDYV 226

Query: 61  NCLVGYFDTYFDLP-SPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
           + LV YF+  F        FSTSP S  THWKQ++F ++  +T+  
Sbjct: 227 HALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKT 272

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 316

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.2 bits (171), Expect = 2e-15
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 121 TTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLP-SPVEFSTSPISTPTHWKQSIFL 179
           T     + F+SPFCL+ +++  ++ LV YF+  F        FSTSP S  THWKQ++F 
Sbjct: 204 TVKVEDLTFTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFY 263

Query: 180 LKTPI 184
           ++  +
Sbjct: 264 MEDYL 268

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 328

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.5 bits (208), Expect = 2e-20
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 5/108 (4%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
            S    L+  +  + T+  + + T+S  L   DLN  T   S + F S+F L A++   +
Sbjct: 174 YSPFVPLVLHEPIVDTVERNNVNTTSDKLIEFDLN--TVKISDLAFKSNFKLTAKRQDMI 231

Query: 61  NCLVGYFDTYFDLPS---PVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
           N +V +FD  F  P    PVEFST P +  THWKQ+IF     +    
Sbjct: 232 NGIVTWFDIVFPAPKGKRPVEFSTGPHAPYTHWKQTIFYFPDDLDAET 279

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 328

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.6 bits (177), Expect = 4e-16
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 120 RTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDLPS---PVEFSTSPISTPTHWKQS 176
            T   S + F S F L A++   +N +V +FD  F  P    PVEFST P +  THWKQ+
Sbjct: 208 NTVKISDLAFKSNFKLTAKRQDMINGIVTWFDIVFPAPKGKRPVEFSTGPHAPYTHWKQT 267

Query: 177 IFLLKTPI 184
           IF     +
Sbjct: 268 IFYFPDDL 275

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (203), Expect = 8e-20
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 1   MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRL 60
           MS M + +  +  +  L P T+++    +  ID +  TT+ S + FSS F L+  + +  
Sbjct: 171 MSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCH--TTSISDLEFSSDFTLKITRTSMC 228

Query: 61  NCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIFLLKTPITLSK 105
             + GYFD YF+    + V FST P ST THWKQ++FLL+ P ++  
Sbjct: 229 TAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEKPFSVKA 275

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 2e-14
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 121 TTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFD--LPSPVEFSTSPISTPTHWKQSIF 178
           TT+ S + FSS F L+  + +    + GYFD YF+    + V FST P ST THWKQ++F
Sbjct: 206 TTSISDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVF 265

Query: 179 LLKTPI 184
           LL+ P 
Sbjct: 266 LLEKPF 271

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	186
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	99.9
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	99.9
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	99.89
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	99.62
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	99.61
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	99.59

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=7.8e-24  Score=178.00  Aligned_cols=132  Identities=28%  Similarity=0.402  Sum_probs=116.8

Q ss_pred             CccchhhhhcCceEEecCCCCcCCCCceEEEEecCccCCCCcceeEeecEEEEeecCceeeEEEEEEEEEec---CCCcE
Q psy8706           1 MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD---LPSPV   77 (186)
Q Consensus         1 Ms~~~~~~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~---~~~~v   77 (186)
                      |+++...++++|.++.+++.++++.|+.+..+|++++  +.+++.+...+++++.++|.+||+++|||+.|+   +..++
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~g~~hg~~~wFd~~l~~~~~~~~i  251 (328)
T d1g6q1_         174 YSPFVPLVLHEPIVDTVERNNVNTTSDKLIEFDLNTV--KISDLAFKSNFKLTAKRQDMINGIVTWFDIVFPAPKGKRPV  251 (328)
T ss_dssp             CTTHHHHHTTSCEEECCCGGGBCBCCEEEEEEETTTC--CGGGGSEEEEEEEEBCSSCEEEEEEEEEEEECCCCTTSCCC
T ss_pred             cchhhhhhccCcEEEEecCceeecCceeEEEeccccc--chhhcceeeeEEEEecCCcEEEEEEEEEEEEccCCCCCCce
Confidence            6788888999999999999999999999999999999  999999999999999999999999999999998   34579


Q ss_pred             EEEecCCCCCcccceeEeeecCeeEeecCceeeeeeeecccccccccccccccCCeEEE
Q psy8706          78 EFSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLARTTTSSCVNFSSPFCLE  136 (186)
Q Consensus        78 ~LSTsP~~~~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl~~~~~~~dl~~~~~f~~~  136 (186)
                      .|||+|.++.|||+|++++|++|+.|++||.|.|++.+..+..  ...++++...++++
T Consensus       252 ~lST~P~~~~thW~Q~v~~l~~pi~v~~gd~i~~~~~~~~~~~--~~r~~~v~~~~~~~  308 (328)
T d1g6q1_         252 EFSTGPHAPYTHWKQTIFYFPDDLDAETGDTIEGELVCSPNEK--NNRDLNIKISYKFE  308 (328)
T ss_dssp             EEECSTTSCCCTTCEEEEEEEEEEECCTTCEEEEEEEEEEETT--EEEEEEEEEEEEEE
T ss_pred             EEeCCCCCCCCceeeEEEEeCCceEeCCCCEEEEEEEEEECCC--CCeeEEEEEEEEEE
Confidence            9999999999999999999999999999999999998887532  33445555445444

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=6.5e-24  Score=177.76  Aligned_cols=117  Identities=26%  Similarity=0.481  Sum_probs=109.8

Q ss_pred             CccchhhhhcCceEEecCCCCcCCCCceEEEEecCccCCCCcceeEeecEEEEeecCceeeEEEEEEEEEec-CCCcEEE
Q psy8706           1 MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD-LPSPVEF   79 (186)
Q Consensus         1 Ms~~~~~~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~-~~~~v~L   79 (186)
                      |++|.+.+..+|.+...++..++++|+.+.++|+.++  +.+++.+..++++++.++|.+||+++|||+.|+ +.+.+.|
T Consensus       169 ~~~~~~~~~~~~~v~~~~~~~~ls~p~~~~~~d~~~~--~~~~l~~~~~~~~~~~~~g~~hg~~~wFd~~l~~~~~~v~l  246 (316)
T d1oria_         169 MSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTV--KVEDLTFTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGF  246 (316)
T ss_dssp             CHHHHHHHHTSCEEECCCGGGEEEEEEEEEEEETTTC--CGGGGSEEEEEEEEBCSSEEEEEEEEEEEEECTTSSSCCEE
T ss_pred             chhhhhhhccccEEEEecCceEeeCCEEeEEEcCCCC--cccCccEEEEEEEeecCCceEEEEEEEEEEEeeCCCCCeEE
Confidence            6788888899999999999999999999999999999  999999999999999999999999999999998 4567999


Q ss_pred             EecCCCCCcccceeEeeecCeeEeecCceeeeeeeecccc
Q psy8706          80 STSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSLA  119 (186)
Q Consensus        80 STsP~~~~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl~  119 (186)
                      ||||.++.|||+|++++|++|+.|++|+.|.|++.+....
T Consensus       247 ST~P~~~~thW~Q~v~~l~~p~~v~~g~~i~~~i~~~~~~  286 (316)
T d1oria_         247 STSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNA  286 (316)
T ss_dssp             ECSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECS
T ss_pred             ECCCCcCCCceecEEEEcCCceEcCCCCEEEEEEEEEECC
Confidence            9999999999999999999999999999999999887653

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4e-23  Score=172.18  Aligned_cols=116  Identities=31%  Similarity=0.547  Sum_probs=109.5

Q ss_pred             CccchhhhhcCceEEecCCCCcCCCCceEEEEecCccCCCCcceeEeecEEEEeecCceeeEEEEEEEEEec--CCCcEE
Q psy8706           1 MSVMTRLIYSDVQILTLPPDTIVTSSSTLTSIDLNSRTTTSSCVNFSSSFCLEARQDTRLNCLVGYFDTYFD--LPSPVE   78 (186)
Q Consensus         1 Ms~~~~~~~~ep~v~~v~~~~ilt~~~~i~~~Dl~t~~~~~~dl~~~~~f~l~~~~~~~v~g~~~wFd~~F~--~~~~v~   78 (186)
                      |++|++...++|.+..+++..++++|+.+.++|+.+.  +.+++.++.+|++++.++|.+||+++|||+.|+  ..+.+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~ls~p~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~g~~~g~~~Wfd~~f~~~~~~~~~  248 (311)
T d2fyta1         171 MSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCHTT--SISDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVV  248 (311)
T ss_dssp             CGGGHHHHTTBCEEECCCGGGBCBCCEEEEEEETTTC--CGGGGSEEEEEEEEBCSCEEEEEEEEEEEEEECTTCSSCEE
T ss_pred             ccchhhccccccEEEecChhheecCCEeEEEeccCcC--ccccccEEEEEEeeecCCcceEEEEEEEEEEEECCCCCceE
Confidence            6788888899999999999999999999999999999  999999999999999999999999999999998  467899


Q ss_pred             EEecCCCCCcccceeEeeecCeeEeecCceeeeeeeeccc
Q psy8706          79 FSTSPISTPTHWKQSIFLLKTPITLSKVKQDMDFLHSKSL  118 (186)
Q Consensus        79 LSTsP~~~~THWkQtv~~l~~p~~v~~g~~I~g~v~~~dl  118 (186)
                      |||+|.++.|||+|++++|++|+.|++||.|.+++.+...
T Consensus       249 lST~P~~~~thW~q~~~~l~~p~~v~~gd~l~~~~~~~~~  288 (311)
T d2fyta1         249 FSTGPQSTKTHWKQTVFLLEKPFSVKAGEALKGKVTVHKN  288 (311)
T ss_dssp             EECSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEEC
T ss_pred             EeCCCCcCCCccccEEEEeCCceEeCCCCEEEEEEEEEEC
Confidence            9999999999999999999999999999999999887654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=6.4e-17  Score=135.28  Aligned_cols=72  Identities=39%  Similarity=0.600  Sum_probs=63.3

Q ss_pred             eeecccccccccccccccCCeEEEeccCCcEeEEEEEEEEEecC---CCceEEccCCCCCCCceeeeEEeccCCCC
Q psy8706         113 LHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDL---PSPVEFSTSPISTPTHWKQSIFLLKTPIG  185 (186)
Q Consensus       113 v~~~dl~~~~~~~dl~~~~~f~~~~~~~~~~~g~~~wFd~~F~~---~~~v~lsT~P~~~~THWkQt~~~l~~p~~  185 (186)
                      +...++. +++.+|+.++..+++++.++|.+|||++|||+.|.+   ..++.|||||.++.|||||++++|++|+.
T Consensus       202 ~~~~~~~-~~~~~~l~~~~~~~~~~~~~g~~hg~~~wFd~~l~~~~~~~~i~lST~P~~~~thW~Q~v~~l~~pi~  276 (328)
T d1g6q1_         202 LIEFDLN-TVKISDLAFKSNFKLTAKRQDMINGIVTWFDIVFPAPKGKRPVEFSTGPHAPYTHWKQTIFYFPDDLD  276 (328)
T ss_dssp             EEEEETT-TCCGGGGSEEEEEEEEBCSSCEEEEEEEEEEEECCCCTTSCCCEEECSTTSCCCTTCEEEEEEEEEEE
T ss_pred             EEEeccc-ccchhhcceeeeEEEEecCCcEEEEEEEEEEEEccCCCCCCceEEeCCCCCCCCceeeEEEEeCCceE
Confidence            3344444 578899999999999999999999999999999984   45799999999999999999999999874

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.61  E-value=2.7e-16  Score=130.89  Aligned_cols=72  Identities=33%  Similarity=0.644  Sum_probs=63.2

Q ss_pred             eeecccccccccccccccCCeEEEeccCCcEeEEEEEEEEEecC-CCceEEccCCCCCCCceeeeEEeccCCCC
Q psy8706         113 LHSKSLARTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDL-PSPVEFSTSPISTPTHWKQSIFLLKTPIG  185 (186)
Q Consensus       113 v~~~dl~~~~~~~dl~~~~~f~~~~~~~~~~~g~~~wFd~~F~~-~~~v~lsT~P~~~~THWkQt~~~l~~p~~  185 (186)
                      +...++. +.+.++++++.+|++++.++|.+|||++|||+.|.. .+.+.|||||.++.|||+|++|+|++|+.
T Consensus       197 ~~~~d~~-~~~~~~l~~~~~~~~~~~~~g~~hg~~~wFd~~l~~~~~~v~lST~P~~~~thW~Q~v~~l~~p~~  269 (316)
T d1oria_         197 IKEVDIY-TVKVEDLTFTSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLT  269 (316)
T ss_dssp             EEEEETT-TCCGGGGSEEEEEEEEBCSSEEEEEEEEEEEEECTTSSSCCEEECSTTSCCCTTCEEEEEEEEEEE
T ss_pred             eEEEcCC-CCcccCccEEEEEEEeecCCceEEEEEEEEEEEeeCCCCCeEEECCCCcCCCceecEEEEcCCceE
Confidence            3334444 578889999999999999999999999999999984 56899999999999999999999999863

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=5.8e-16  Score=128.30  Aligned_cols=66  Identities=45%  Similarity=0.777  Sum_probs=60.6

Q ss_pred             cccccccccccCCeEEEeccCCcEeEEEEEEEEEecC--CCceEEccCCCCCCCceeeeEEeccCCCC
Q psy8706         120 RTTTSSCVNFSSPFCLEARQDTRLNCLVGYFDTYFDL--PSPVEFSTSPISTPTHWKQSIFLLKTPIG  185 (186)
Q Consensus       120 ~~~~~~dl~~~~~f~~~~~~~~~~~g~~~wFd~~F~~--~~~v~lsT~P~~~~THWkQt~~~l~~p~~  185 (186)
                      .+.+.+++.++.+|+++++++|.+||+++|||+.|..  .+.+.|||||.++.|||+|++++|++|+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~Wfd~~f~~~~~~~~~lST~P~~~~thW~q~~~~l~~p~~  272 (311)
T d2fyta1         205 HTTSISDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEKPFS  272 (311)
T ss_dssp             TTCCGGGGSEEEEEEEEBCSCEEEEEEEEEEEEEECTTCSSCEEEECSTTSCCCTTCEEEEEEEEEEE
T ss_pred             CcCccccccEEEEEEeeecCCcceEEEEEEEEEEEECCCCCceEEeCCCCcCCCccccEEEEeCCceE
Confidence            3577889999999999999999999999999999984  57899999999999999999999999874