Psyllid ID: psy8742

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------97

MYRATAFRKIIPQLSSSPTHSASNKVKSKLCVVSSRQQSSVPAAEPFLNGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSAGALPEDPKSVHASWDAFFRSSSAGALPGQAYQPPPTLAPPSGNQVPISSLAPFVGGASSHFNEPLSEKIIDDHLAVQALIRSYQIRGHHIAQLDPLGIQAADLDDKHPQELIFHNFWPSSISYAQQLQHKVADMMQKETDMEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLETPGIMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGVESVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDDPEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYANKLIEEKVVTEEQVKDVKEKYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPLKVSTTGINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVESRTVDWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSSLSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGLEGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFCSGKVYYDLIKARNDNNLGDKIAV

ccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccEEEcccccccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHcccHHHHHHccccccccccccccccccccccccEEccccccEEEEEEEcccccccccccEEEEEHHHHHHHcccccccEEEEEEEEHHHHccccHHHHHHHccccccccccccEEEEEEccccccccccccccccccHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccEEEEcccccccccccccccEEEEEcccccEEccccccccccccEEEEcccHHHHHHHHccccccccccccEEEEEccccccccccEEEEEcccccHHHHHccccccEEEcccccccccccccccHHHHHHHHcccccccccccccHHHHHHHccccccEEEEEcccHHHHHHHHHHHcccccccccEEEccccccccccccccHHccccccccEEccccccccccccccccEEEEEccHHHHHHHHHHHHccccccccc

ccHHHHHHHHHHHHHHHHHccccccccccccHccHcccccHcccccHHccccHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccHcccccccccccccccccccccHHHcccccccccccccHHHHHHHccccHHHcccEEEcccEEEEccccccccHHHHHHHHHHHHcccEEEEEEEEccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHcccHHHHHHHHccccccccccccEEEEccccccccccccccEEEEEEEEcccccEEEccEEEEEEEEEEcccccccccEEEEEEEEccHHHccccEEEEHEcccccccccccEEEEEEEEcccccccccccccccccccHHHHHEcccEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEEEEEccccccccccccccHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccEEEEccccccccEcccEEEEEEccccccEEEEHHHcccccccEEEEcccccHHHHHHHHHcccccccccEEEEEHcccccccccEEEEEHHcccHHHHHHHHccHEEEccccccccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHccEEEEccccHHHHHHHHHHHHHccccccEEEEccHHHcccHHHHccHHHHccccccEEEEccccHHcccHHHcEEEEEEcccEHHHHHHHHHHcccccEEEc

myratafrkiipqlssspthsasnkvkSKLCVVSsrqqssvpaaepflngasaNYVEEMYRSwqedpksvhaSWDAFfrsssagalpedpksvhaSWDAFfrsssagalpgqayqppptlappsgnqvpisslapfvggasshfneplsekiIDDHLAVQALIRSYQIrghhiaqldplgiqaadlddkhpqelifhnfwpssiSYAQQLQHKVADMMQKETDmekvfklpsttfiggkekaLPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQkletpgimnmsEDQKRLILARLTRATGFEAFLARKWSsekrfglegaEILIPAMKQVIDKSTELGVESVVmgmphrgrlNVLANVCRKPLEQIFTQFAALeaaddgsgdvKYHLGTYIERLNRVTNKNIRLAVvanpshleavdpvvqgktraeqfyrgdgeGKKVMSILLHGDAAFCGQGVVfetfhlsdlpdytthgtIHIVVnnqigfttdprfsrsssyctdvarvvnapifhvnsddpeAVIHVCNLAAEWRNTFHKDVVIDIVSYRrnghneidepmftqpLMYKIIKKTPPALDKYANKLIEEKVVTEEQVKDVKEKYDKICEEAYVNARKETHIKYkdwldspwsgffegkdplkvsttginenTLVHIgkrfsspppnateFVIHKGIERILKARLQMVESRTVDWALGEAMAFGSLLKEGIHvrlsgqdvergtfshrhhvlhhqtvdkatyrplnnlypdqapytvcnsslsefgVLGFElgfsmtnpntlVCWEaqfgdfnntAQCIIDQFISSGQAKWVRQSGLVMllphglegmgpehssARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIiancttpaNLFHILRRQIalpfrkplvlmtpksllrhpeakssfddmiegteflrvipddsiserkadSVEKLVFCSGKVYYDLIKarndnnlgdkiav

myratafrkiipqlssspthsasnkVKSKLCVVSSRqqssvpaaepflnGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSAGALPEDPKSVHASWDAFFRSSSAGALPGQAYQPPPTLAPPSGNQVPISSLAPFVGGASSHFNEPLSEKIIDDHLAVQALIRSYQIRGHHIAQLDPLGIQAADLDDKHPQELIFHNFWPSSISYAQQLQHKVADMMQKETDMEKVFKlpsttfiggkekalplREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLETPGIMNMSEDQKRLILARLTRATGFEAflarkwssekrFGLEGAEILIPAMKQVIDKSTELGVESVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALeaaddgsgDVKYHLGTYIERLNRVTNKNIRLAVvanpshleavdpvvqgktRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDDPEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNghneidepmftqpLMYKIIKKTPPALDKYANKLieekvvteeqvkdvkekYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPLKVSTTGINENTLVHigkrfsspppnATEFVIHKGIERILKARLQMVESRTVDWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLhhqtvdkatyrPLNNLYPDQAPYTVCNSSLSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGLEGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHILRRQIALPFRKPLVLMtpksllrhpeakssfddmieGTEFLrvipddsiserkadsvekLVFCSGKVyydlikarndnnlgdkiav

*****************************************************NYVEEMYRSW*******HASWDAFF********************************************************************PLSEKIIDDHLAVQALIRSYQIRGHHIAQLDPLGIQAADLDDKHPQELIFHNFWPSSISYAQQLQHKVAD*******MEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLETPGIMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGVESVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDDPEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYANKLIEEKVVTEEQVKDVKEKYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPLKVSTTGINENTLVHIGKRFS****NATEFVIHKGIERILKARLQMVESRTVDWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSSLSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGL**************FLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHILRRQIALPFRKPLVLMTPKSLL***********MIEGTEFLRVIPD********DSVEKLVFCSGKVYYDLIKAR***********

************************************************NGASANYVEEMYRSWQEDPKSVHASWDAFFRSS**************************************************************FNEPLSEKIIDDHLAVQALIRSYQIRGHHIAQLDPLGIQAADLDDKHPQELIFHNFWPSSISYAQQLQHKVADMMQKETDMEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLETPGIM*MSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGVESVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDDPEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYANKLIEEKVVTEEQVKDVKEKYDKICEEAYVNARKE*****KDWLDSPW**************TGINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVESRTVDWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSSLSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGLEGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFCSGKVYYDLIKARNDNN***KIAV

MYRATAFRKIIPQLS**************************PAAEPFLNGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSAGALPEDPKSVHASWDAFFRSSSAGALPGQAYQPPPTLAPPSGNQVPISSLAPFVGGASSHFNEPLSEKIIDDHLAVQALIRSYQIRGHHIAQLDPLGIQAADLDDKHPQELIFHNFWPSSISYAQQLQHKVADMMQKETDMEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLETPGIMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGVESVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDDPEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYANKLIEEKVVTEEQVKDVKEKYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPLKVSTTGINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVESRTVDWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSSLSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGLEGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFCSGKVYYDLIKARNDNNLGDKIAV

MYRATAFRKIIPQLSSSPTHS*********************AAEPFLNGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSA************SWDAFFRSSSAGALPGQAYQPPPTLAPPS*N******LAPFV**A*SHFNEPLSEKIIDDHLAVQALIRSYQIRGHHIAQLDPLGIQAADLDDKHPQELIFHNFWPSSISYAQQLQHKVADMMQKETDMEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLETPGIMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGVESVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDDPEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYANKLIEEKVVTEEQVKDVKEKYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPLKVSTTGINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVESRTVDWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSSLSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGLEGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFCSGKVYYDLIKARNDNNLGDKIAV

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MYRATAFRKIIPQLSSSPTHSASNKVKSKLCVVSSRQQSSVPAAEPFLNGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSAGALPEDPKSVHASWDAFFRSSSAGALPGQAYQPPPTLAPPSGNQVPISSLAPFVGGASSHFNEPLSEKIIDDHLAVQALIRSYQIRGHHIAQLDPLGIQAADLDDKHPQELIFHNFWPSSISYAQQLQHKVADMMQKETDMEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLETPGIMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGVESVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDDPEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYxxxxxxxxxxxxxxxxxxxxxYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPLKVSTTGINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVESRTVDWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSSLSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGLEGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFCSGKVYYDLIKARNDNNLGDKIAV

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		968	2.2.26 [Sep-21-2011]
Q60HE2		1023	2-oxoglutarate dehydrogen	N/A	N/A	0.913	0.864	0.635	0.0
Q02218		1023	2-oxoglutarate dehydrogen	yes	N/A	0.913	0.864	0.634	0.0
Q148N0		1023	2-oxoglutarate dehydrogen	yes	N/A	0.908	0.859	0.634	0.0
Q5RCB8		1023	2-oxoglutarate dehydrogen	yes	N/A	0.913	0.864	0.634	0.0
Q5XI78		1023	2-oxoglutarate dehydrogen	yes	N/A	0.915	0.866	0.633	0.0
Q60597		1023	2-oxoglutarate dehydrogen	yes	N/A	0.915	0.866	0.633	0.0
Q6P6Z8		1021	2-oxoglutarate dehydrogen	N/A	N/A	0.913	0.865	0.622	0.0
Q9ULD0		1010	2-oxoglutarate dehydrogen	no	N/A	0.887	0.850	0.631	0.0
Q5R9L8		1010	2-oxoglutarate dehydrogen	no	N/A	0.887	0.850	0.629	0.0
Q68EW0		1018	2-oxoglutarate dehydrogen	N/A	N/A	0.907	0.862	0.627	0.0

>sp\|Q60HE2\|ODO1_MACFA 2-oxoglutarate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=OGDH PE=2 SV=1	Back alignment and function desciption

 Score = 1222 bits (3161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/939 (63%), Positives = 718/939 (76%), Gaps = 55/939 (5%)

Query: 36  RQQSSVPAAEPFLNGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSAGALPEDPKSVHA 95
           R  S+  AAEPFL+G S+NYVEEMY +W E+PKSV                       H 
Sbjct: 38  RCYSAPVAAEPFLSGTSSNYVEEMYCAWLENPKSV-----------------------HK 74

Query: 96  SWDAFFRSSSAGALPGQAYQPPPTLAPPSGNQVPIS--SLAPFVGGASSHFNEPLSEKII 153
           SWD FFR+++AGA PG AYQ P          +P+S  SLA      S    +P  +K++
Sbjct: 75  SWDIFFRNTNAGAPPGTAYQSP----------LPLSRGSLAAVAHAQSLVEAQPNVDKLV 124

Query: 154 DDHLAVQALIRSYQIRGHHIAQLDPLGIQAADLDDKHPQELIFHNFWPSSISYAQQLQHK 213
           +DHLAVQ+LIR+YQIRGHH+AQLDPLGI  ADLD   P ++I         S   +L   
Sbjct: 125 EDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPADII---------SSTDKLGFY 175

Query: 214 VADMMQKETDMEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQC 273
             D    E+D++KVF LP+TTFIGG+E ALPLREII+RLE  YC+ IG EFMFIN LEQC
Sbjct: 176 GLD----ESDLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEFMFINDLEQC 231

Query: 274 NWIRQKLETPGIMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMK 333
            WIRQK ETPGIM  + ++KR +LARL R+T FE FL RKWSSEKRFGLEG E+LIPA+K
Sbjct: 232 QWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALK 291

Query: 334 QVIDKSTELGVESVVMGMPHRGRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHL 392
            +IDKS+E GV+ V+MGMPHRGRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHL
Sbjct: 292 TIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHL 351

Query: 393 GTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGD 452
           G Y  R+NRVT++NI L++VANPSHLEA DPVV GKT+AEQFY GD EGKKVMSILLHGD
Sbjct: 352 GMYHRRINRVTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGD 411

Query: 453 AAFCGQGVVFETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAP 512
           AAF GQG+V+ETFHLSDLP YTTHGT+H+VVNNQIGFTTDPR +RSS Y TDVARVVNAP
Sbjct: 412 AAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAP 471

Query: 513 IFHVNSDDPEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIK 572
           IFHVNSDDPEAV++VC +AAEWR+TFHKDVV+D+V YRRNGHNE+DEPMFTQPLMYK I+
Sbjct: 472 IFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIR 531

Query: 573 KTPPALDKYANKLIEEKVVTEEQVKDVKEKYDKICEEAYVNARKETHIKYKDWLDSPWSG 632
           K  P L KYA  L+ + VV + + ++   KYDKICEEA+  ++ E  +  K WLDSPW G
Sbjct: 532 KQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKDEKILHIKHWLDSPWPG 591

Query: 633 FF--EGK-DPLKVSTTGINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVESR 689
           FF  +G+   +   +TG+ E+ L HIG   SS P     F IH G+ RILK R +MV++R
Sbjct: 592 FFTLDGQPRSMSCPSTGLTEDILTHIGNVASSVP--VENFTIHGGLSRILKTRGEMVKNR 649

Query: 690 TVDWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPD 749
           TVDWAL E MAFGSLLKEGIH+RLSGQDVERGTFSHRHHVLH Q VDK T  P+N+L+P+
Sbjct: 650 TVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPN 709

Query: 750 QAPYTVCNSSLSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKW 809
           QAPYTVCNSSLSE+GVLGFELGF+M +PN LV WEAQFGDF+NTAQCIIDQFI  GQAKW
Sbjct: 710 QAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKW 769

Query: 810 VRQSGLVMLLPHGLEGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWI 869
           VRQ+G+V+LLPHG+EGMGPEHSSAR ERFLQM +D+P  V+  L    F + QLHD NW+
Sbjct: 770 VRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDP-DVLPDLKEANFDINQLHDCNWV 828

Query: 870 IANCTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDD 929
           + NC+TP N FH+LRRQI LPFRKPL++ TPKSLLRHPEA+SSFD+M+ GT F RVIP+D
Sbjct: 829 VVNCSTPGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFQRVIPED 888

Query: 930 SISERKADSVEKLVFCSGKVYYDLIKARNDNNLGDKIAV 968
             + +  ++V++L+FC+GKVYYDL + R   ++  ++A+
Sbjct: 889 GPAAQNPENVKRLLFCTGKVYYDLTRERKARDMVGQVAI 927

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).
Macaca fascicularis (taxid: 9541)
EC: 1EC: .EC: 2EC: .EC: 4EC: .EC: 2

>sp\|Q02218\|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH PE=1 SV=3	Back alignment and function description

>sp\|Q148N0\|ODO1_BOVIN 2-oxoglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=OGDH PE=2 SV=1	Back alignment and function description

>sp\|Q5RCB8\|ODO1_PONAB 2-oxoglutarate dehydrogenase, mitochondrial OS=Pongo abelii GN=OGDH PE=2 SV=1	Back alignment and function description

>sp\|Q5XI78\|ODO1_RAT 2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Ogdh PE=1 SV=1	Back alignment and function description

>sp\|Q60597\|ODO1_MOUSE 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=Ogdh PE=1 SV=3	Back alignment and function description

>sp\|Q6P6Z8\|ODO1_XENLA 2-oxoglutarate dehydrogenase, mitochondrial OS=Xenopus laevis GN=ogdh PE=2 SV=1	Back alignment and function description

>sp\|Q9ULD0\|OGDHL_HUMAN 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens GN=OGDHL PE=1 SV=3	Back alignment and function description

>sp\|Q5R9L8\|OGDHL_PONAB 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Pongo abelii GN=OGDHL PE=2 SV=2	Back alignment and function description

>sp\|Q68EW0\|OGDHL_XENLA 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Xenopus laevis GN=ogdhl PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		968
340720185		1044	PREDICTED: 2-oxoglutarate dehydrogenase,	0.971	0.900	0.763	0.0
322784969		1065	hypothetical protein SINV_11249 [Solenop	0.953	0.866	0.766	0.0
328697385		1047	PREDICTED: 2-oxoglutarate dehydrogenase,	0.939	0.868	0.773	0.0
380017767		1072	PREDICTED: 2-oxoglutarate dehydrogenase,	0.957	0.864	0.760	0.0
307204872		1080	2-oxoglutarate dehydrogenase E1 componen	0.918	0.823	0.779	0.0
242024794		1023	2-oxoglutarate dehydrogenase, putative [	0.919	0.869	0.789	0.0
328786455		1072	PREDICTED: 2-oxoglutarate dehydrogenase,	0.957	0.864	0.755	0.0
350420108		1066	PREDICTED: 2-oxoglutarate dehydrogenase,	0.951	0.863	0.760	0.0
229892296		1021	oxoglutarate (alpha-ketoglutarate) dehyd	0.915	0.867	0.785	0.0
328697388		1026	PREDICTED: 2-oxoglutarate dehydrogenase,	0.922	0.870	0.769	0.0

>gi\|340720185\|ref\|XP_003398522.1\| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Bombus terrestris]	Back alignment and taxonomy information

 Score = 1550 bits (4012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 751/983 (76%), Positives = 842/983 (85%), Gaps = 43/983 (4%)

Query: 1   MYRA-TAFRKIIPQLS--SSPTHSASNKVKS-------KLCVVSSRQQSSVPAAEPFLNG 50
           MY+A T F  + P       P   AS  V+S       ++ V    ++ S  A EPFLNG
Sbjct: 1   MYKARTVFSTLAPLAPRMCKPERFASWLVRSHPLTRTTQVIVTEPIRKYSKVATEPFLNG 60

Query: 51  ASANYVEEMYRSWQEDPKSVHASWDAFFRSSSAGALPEDPKSVHASWDAFFRSSSAGALP 110
           +S+ YVEEMY +W +DP SVH                        SWD+FFRSS+AGA P
Sbjct: 61  SSSTYVEEMYNAWLQDPHSVHV-----------------------SWDSFFRSSTAGAAP 97

Query: 111 GQAYQPPPTLAPPSGNQVPISSLAPFVGGASSHFNE-PLSEKIIDDHLAVQALIRSYQIR 169
           G AYQ PP+LAP S NQVP+ +L     G  +  ++ P++EKIIDDHLAVQA+IRSYQIR
Sbjct: 98  GLAYQAPPSLAP-SHNQVPLGALL--PLGGGTQLSQIPVNEKIIDDHLAVQAIIRSYQIR 154

Query: 170 GHHIAQLDPLGIQAADLDDKHPQELIFHNF----WPSSISYAQQLQHKVADMMQKETDME 225
           GHHIA+LDPLGI +ADLDD+HPQEL+++++       + +Y+Q+LQ+++A +M+KE+DM+
Sbjct: 155 GHHIAKLDPLGINSADLDDRHPQELLYNHYSFGNRARTTTYSQELQYRIAALMKKESDMD 214

Query: 226 KVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLETPGI 285
           ++FKLPSTTFIGGKEK+LPLREI+KRLE  YC  IG EFMFINSLEQCNWIRQK+ETPGI
Sbjct: 215 RIFKLPSTTFIGGKEKSLPLREILKRLEAAYCGHIGVEFMFINSLEQCNWIRQKMETPGI 274

Query: 286 MNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGVE 345
           M M+ D++RLILARLTRATGFEAFLARKWSSEKRFGLEG EILIPAMKQVIDKSTELGVE
Sbjct: 275 MEMTNDERRLILARLTRATGFEAFLARKWSSEKRFGLEGCEILIPAMKQVIDKSTELGVE 334

Query: 346 SVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNK 405
           S+VMGMPHRGRLNVLANVCRKPL QIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNK
Sbjct: 335 SIVMGMPHRGRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNK 394

Query: 406 NIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETF 465
           NIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQG+VFET 
Sbjct: 395 NIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGIVFETM 454

Query: 466 HLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDDPEAVI 525
           HLSDLPDYTTHGTIHIVVNNQIGFTTDPR SRSS YCTDVARVVNAPIFHVNSDDPEAV+
Sbjct: 455 HLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTDVARVVNAPIFHVNSDDPEAVM 514

Query: 526 HVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYANKL 585
           HVC +AAEWR TFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMY+ I+ TPP LD YA  L
Sbjct: 515 HVCKVAAEWRATFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYRKIRNTPPVLDIYAKSL 574

Query: 586 IEEKVVTEEQVKDVKEKYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPLKVSTT 645
           I++ VV+ E+VKDVK+KY+KICEEAYVNAR+ETHIKYKDWLDSPWSGFFEGKDPLKVS T
Sbjct: 575 IDDSVVSPEEVKDVKDKYEKICEEAYVNARQETHIKYKDWLDSPWSGFFEGKDPLKVSPT 634

Query: 646 GINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVESRTVDWALGEAMAFGSLL 705
           GI E+TL+HIGK+FSSPPPNA EFV+HKGIERILK+R++M+E+RTVDWALGEAMAFGSLL
Sbjct: 635 GIKEDTLIHIGKKFSSPPPNAAEFVVHKGIERILKSRMEMIEARTVDWALGEAMAFGSLL 694

Query: 706 KEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSSLSEFGV 765
           KEG+HVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPL  LYPDQAPYTVCNSSLSEFGV
Sbjct: 695 KEGVHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLCYLYPDQAPYTVCNSSLSEFGV 754

Query: 766 LGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGLEG 825
           LGFELG+SMTNPN LVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVML PHGLEG
Sbjct: 755 LGFELGYSMTNPNALVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLQPHGLEG 814

Query: 826 MGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHILRR 885
           MGPEHSSARLERFLQMS D+P          EFAVRQLHD NWI+ANC+TPAN FHILRR
Sbjct: 815 MGPEHSSARLERFLQMSADDPD--YFPPESEEFAVRQLHDSNWIVANCSTPANYFHILRR 872

Query: 886 QIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFC 945
           QIALPFRKPL+LMTPKSLLRHPEAKSSFD M+E TEFLRVIP++ ++ +   +V++++FC
Sbjct: 873 QIALPFRKPLILMTPKSLLRHPEAKSSFDLMLENTEFLRVIPEEGVASQNPSNVKRIIFC 932

Query: 946 SGKVYYDLIKARNDNNLGDKIAV 968
           SGKVYYDL KAR +  L DK+A+
Sbjct: 933 SGKVYYDLKKARAEKKLDDKVAI 955

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|322784969\|gb\|EFZ11740.1\| hypothetical protein SINV_11249 [Solenopsis invicta]	Back alignment and taxonomy information

>gi\|328697385\|ref\|XP_003240323.1\| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 2 [Acyrthosiphon pisum]	Back alignment and taxonomy information

>gi\|380017767\|ref\|XP_003692817.1\| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Apis florea]	Back alignment and taxonomy information

>gi\|307204872\|gb\|EFN83427.1\| 2-oxoglutarate dehydrogenase E1 component, mitochondrial [Harpegnathos saltator]	Back alignment and taxonomy information

>gi\|242024794\|ref\|XP_002432811.1\| 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis] gi\|212518320\|gb\|EEB20073.1\| 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis]	Back alignment and taxonomy information

>gi\|328786455\|ref\|XP_391838.3\| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 1 [Apis mellifera]	Back alignment and taxonomy information

>gi\|350420108\|ref\|XP_003492401.1\| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Bombus impatiens]	Back alignment and taxonomy information

>gi\|229892296\|ref\|NP_001153501.1\| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Nasonia vitripennis]	Back alignment and taxonomy information

>gi\|328697388\|ref\|XP_003240324.1\| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 3 [Acyrthosiphon pisum]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		968
FB\|FBgn0010352		1105	Nc73EF "Neural conserved at 73	0.770	0.675	0.780	0.0
UNIPROTKB\|E9PCR7		1038	OGDH "2-oxoglutarate dehydroge	0.897	0.837	0.649	0.0
UNIPROTKB\|Q60HE2		1023	OGDH "2-oxoglutarate dehydroge	0.884	0.836	0.654	0.0
UNIPROTKB\|Q02218		1023	OGDH "2-oxoglutarate dehydroge	0.884	0.836	0.653	0.0
UNIPROTKB\|Q5RCB8		1023	OGDH "2-oxoglutarate dehydroge	0.884	0.836	0.653	0.0
UNIPROTKB\|E9PDF2		1034	OGDH "2-oxoglutarate dehydroge	0.893	0.836	0.646	0.0
UNIPROTKB\|F5H801		974	OGDH "2-oxoglutarate dehydroge	0.893	0.888	0.646	0.0
ZFIN\|ZDB-GENE-090311-8		1023	ogdhb "oxoglutarate (alpha-ket	0.859	0.813	0.662	0.0
UNIPROTKB\|Q9ULD0		1010	OGDHL "2-oxoglutarate dehydrog	0.829	0.795	0.672	0.0
UNIPROTKB\|Q148N0		1023	OGDH "2-oxoglutarate dehydroge	0.833	0.788	0.662	0.0

FB\|FBgn0010352 Nc73EF "Neural conserved at 73EF" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

 Score = 3142 (1111.1 bits), Expect = 0., Sum P(2) = 0.
 Identities = 584/748 (78%), Positives = 652/748 (87%)

Query:   221 ETDMEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKL 280
             E DM++ FKLPSTTFIGG E +LPL+EI+ RLE+ YC  IG EFMFINSLEQCNWIR++ 
Sbjct:   174 EQDMDRQFKLPSTTFIGGDEASLPLKEILNRLENVYCNKIGVEFMFINSLEQCNWIRKRF 233

Query:   281 ETPGIMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKST 340
             ETPG++N S ++KRLILARLTRATGFEAFLA+K+SSEKRFGLEG EI+IPA+K++ID ST
Sbjct:   234 ETPGVLNFSPEEKRLILARLTRATGFEAFLAKKYSSEKRFGLEGCEIMIPALKEIIDVST 293

Query:   341 ELGVESVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLN 400
             ELGVESV+MGMPHRGRLN LANVCRKPL QIFTQFA LEAADDGSGDVKYHLGTYIERLN
Sbjct:   294 ELGVESVIMGMPHRGRLNTLANVCRKPLNQIFTQFAGLEAADDGSGDVKYHLGTYIERLN 353

Query:   401 RVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGV 460
             RVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGD EGKKVMSIL+HGDAAFCGQGV
Sbjct:   354 RVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDQEGKKVMSILIHGDAAFCGQGV 413

Query:   461 VFETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDD 520
             V+ET HLSDLPDYTTHGTIH+V NNQIGFTTDPRFSRSS YCTDVARVVNAPIFHVN+DD
Sbjct:   414 VYETMHLSDLPDYTTHGTIHVVANNQIGFTTDPRFSRSSPYCTDVARVVNAPIFHVNADD 473

Query:   521 PEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDK 580
             PEAV+HVC +AAEWR TFHKD VID+V YRRNGHNEIDEPMFTQPLMY+ I+K    LD 
Sbjct:   474 PEAVMHVCKVAAEWRATFHKDCVIDLVGYRRNGHNEIDEPMFTQPLMYQKIRKHKNCLDL 533

Query:   581 YANKLIEEKVVTEEQVKDVKEKYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPL 640
             YA+KLI E  VT E+VK V  KY+ ICEEA+  A+ ETH+KYKDWLDSPWSGFFEGKDPL
Sbjct:   534 YADKLIAEGTVTAEEVKSVAAKYENICEEAFALAKTETHVKYKDWLDSPWSGFFEGKDPL 593

Query:   641 KVSTTGINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVESRTVDWALGEAMA 700
             KV+ TG+ E TL+HIG RFSSPPPNA EFVIHKG+ R+L AR  MV+ +  DWALGEAMA
Sbjct:   594 KVAPTGVKEETLIHIGNRFSSPPPNAAEFVIHKGLLRVLAARKAMVDEKVADWALGEAMA 653

Query:   701 FGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSSL 760
             FGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQ VDKATY  L ++YPDQAPY+V NSSL
Sbjct:   654 FGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQLVDKATYNSLQHMYPDQAPYSVSNSSL 713

Query:   761 SEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLP 820
             SE+ VLGFE G+SMTNPN LV WEAQFGDF+NTAQ IIDQFISSGQ+KWVRQSGLVMLLP
Sbjct:   714 SEYAVLGFEHGYSMTNPNALVLWEAQFGDFSNTAQSIIDQFISSGQSKWVRQSGLVMLLP 773

Query:   821 HGLEGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLF 880
             HG+EGMGPEHSS R+ERFLQMS D+P          EF VRQLHDINWI+ANC+TPAN +
Sbjct:   774 HGMEGMGPEHSSCRVERFLQMSSDDPD--YFPPESDEFGVRQLHDINWIVANCSTPANYY 831

Query:   881 HILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVE 940
             HILRRQIALPFRKPL+L TPKSLLRHPEAKS F +M EG+EF R+IPD+  + +   +V+
Sbjct:   832 HILRRQIALPFRKPLILCTPKSLLRHPEAKSPFSEMSEGSEFQRIIPDNGPAGQNPSNVK 891

Query:   941 KLVFCSGKVYYDLIKARNDNNLGDKIAV 968
             K+VFCSG+VYYDL K R +  L  +IA+
Sbjct:   892 KVVFCSGRVYYDLTKTRREKQLEGEIAI 919

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=ISS

GO:0009353 "mitochondrial oxoglutarate dehydrogenase complex" evidence=ISS

GO:0006099 "tricarboxylic acid cycle" evidence=ISS

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IDA

UNIPROTKB\|E9PCR7 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q60HE2 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Macaca fascicularis (taxid:9541)]	Back alignment and assigned GO terms

UNIPROTKB\|Q02218 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5RCB8 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Pongo abelii (taxid:9601)]	Back alignment and assigned GO terms

UNIPROTKB\|E9PDF2 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F5H801 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-090311-8 ogdhb "oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide)" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9ULD0 OGDHL "2-oxoglutarate dehydrogenase-like, mitochondrial" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q148N0 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A5VSQ0	ODO1_BRUO2	1, ., 2, ., 4, ., 2	0.4120	0.8915	0.8595	yes	N/A
Q57AX5	ODO1_BRUAB	1, ., 2, ., 4, ., 2	0.4139	0.8935	0.8615	yes	N/A
Q4UKI8	ODO1_RICFE	1, ., 2, ., 4, ., 2	0.3959	0.8719	0.8638	yes	N/A
Q2YLS2	ODO1_BRUA2	1, ., 2, ., 4, ., 2	0.4139	0.8935	0.8615	yes	N/A
Q1RHI4	ODO1_RICBR	1, ., 2, ., 4, ., 2	0.4019	0.8388	0.8759	yes	N/A
Q59106	ODO1_CUPNH	1, ., 2, ., 4, ., 2	0.3976	0.8553	0.8715	yes	N/A
Q60597	ODO1_MOUSE	1, ., 2, ., 4, ., 2	0.6339	0.9152	0.8660	yes	N/A
Q68EW0	OGDHL_XENLA	1, ., 2, ., 4, ., -	0.6279	0.9070	0.8624	N/A	N/A
A9M8Q9	ODO1_BRUC2	1, ., 2, ., 4, ., 2	0.4145	0.8925	0.8605	yes	N/A
Q8NRC3	ODO12_CORGL	1, ., 2, ., 4, ., 2	0.3973	0.7737	0.6134	yes	N/A
O74378	ODO1_SCHPO	1, ., 2, ., 4, ., 2	0.4509	0.9049	0.8681	yes	N/A
O61199	ODO1_CAEEL	1, ., 2, ., 4, ., 2	0.5768	0.9359	0.8804	yes	N/A
A6WXF0	ODO1_OCHA4	1, ., 2, ., 4, ., 2	0.4144	0.8987	0.8691	yes	N/A
A0R2B1	KGD_MYCS2	4, ., 1, ., 1, ., 7, 1	0.4109	0.7768	0.6128	yes	N/A
Q5XI78	ODO1_RAT	1, ., 2, ., 4, ., 2	0.6339	0.9152	0.8660	yes	N/A
B2S877	ODO1_BRUA1	1, ., 2, ., 4, ., 2	0.4139	0.8935	0.8615	yes	N/A
P0AFG4	ODO1_ECOL6	1, ., 2, ., 4, ., 2	0.4036	0.8419	0.8735	yes	N/A
Q92J42	ODO1_RICCN	1, ., 2, ., 4, ., 2	0.3926	0.8419	0.8782	yes	N/A
Q6P6Z8	ODO1_XENLA	1, ., 2, ., 4, ., 2	0.6221	0.9132	0.8658	N/A	N/A
Q54JE4	ODO1_DICDI	1, ., 2, ., 4, ., 2	0.4683	0.8977	0.8578	yes	N/A
B0CIS7	ODO1_BRUSI	1, ., 2, ., 4, ., 2	0.4139	0.8935	0.8615	yes	N/A
Q8FYF7	ODO1_BRUSU	1, ., 2, ., 4, ., 2	0.4120	0.8915	0.8595	yes	N/A
Q60HE2	ODO1_MACFA	1, ., 2, ., 4, ., 2	0.6357	0.9132	0.8641	N/A	N/A
Q623T0	ODO1_CAEBR	1, ., 2, ., 4, ., 2	0.5786	0.9369	0.8831	N/A	N/A
Q9ULD0	OGDHL_HUMAN	1, ., 2, ., 4, ., -	0.6318	0.8873	0.8504	no	N/A
Q68XI7	ODO1_RICTY	1, ., 2, ., 4, ., 2	0.3908	0.8419	0.8735	yes	N/A
P20967	ODO1_YEAST	1, ., 2, ., 4, ., 2	0.4594	0.8801	0.8402	yes	N/A
Q9ZDY3	ODO1_RICPR	1, ., 2, ., 4, ., 2	0.3965	0.8388	0.8675	yes	N/A
Q5R9L8	OGDHL_PONAB	1, ., 2, ., 4, ., -	0.6296	0.8873	0.8504	no	N/A
O50463	KGD_MYCTU	4, ., 1, ., 1, ., 7, 1	0.4114	0.7747	0.6092	yes	N/A
Q02218	ODO1_HUMAN	1, ., 2, ., 4, ., 2	0.6347	0.9132	0.8641	yes	N/A
Q8YJE4	ODO1_BRUME	1, ., 2, ., 4, ., 2	0.4110	0.8915	0.8595	yes	N/A
P20707	ODO1_AZOVI	1, ., 2, ., 4, ., 2	0.4073	0.8491	0.8716	yes	N/A
P45303	ODO1_HAEIN	1, ., 2, ., 4, ., 2	0.4036	0.8502	0.8802	yes	N/A
Q5RCB8	ODO1_PONAB	1, ., 2, ., 4, ., 2	0.6347	0.9132	0.8641	yes	N/A
Q7U0A6	KGD_MYCBO	4, ., 1, ., 1, ., 7, 1	0.4126	0.7747	0.6092	yes	N/A
A5U1U6	KGD_MYCTA	4, ., 1, ., 1, ., 7, 1	0.4114	0.7747	0.6092	yes	N/A
Q72PJ7	ODO1_LEPIC	1, ., 2, ., 4, ., 2	0.4030	0.8357	0.8793	yes	N/A
A1KI36	KGD_MYCBP	4, ., 1, ., 1, ., 7, 1	0.4126	0.7747	0.6092	yes	N/A
C0RFG8	ODO1_BRUMB	1, ., 2, ., 4, ., 2	0.4110	0.8915	0.8595	yes	N/A
Q148N0	ODO1_BOVIN	1, ., 2, ., 4, ., 2	0.6344	0.9080	0.8592	yes	N/A
Q9CC97	KGD_MYCLE	4, ., 1, ., 1, ., 7, 1	0.4095	0.7747	0.6058	yes	N/A
Q8F6S7	ODO1_LEPIN	1, ., 2, ., 4, ., 2	0.4030	0.8357	0.8793	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.4	0.963
4th Layer	1.2.4.2	0.946

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		968
PRK09404		924	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 co	0.0
COG0567		906	COG0567, SucA, 2-oxoglutarate dehydrogenase comple	0.0
PRK12270		1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	0.0
TIGR00239		929	TIGR00239, 2oxo_dh_E1, 2-oxoglutarate dehydrogenas	0.0
cd02016		265	cd02016, TPP_E1_OGDC_like, Thiamine pyrophosphate	1e-173
pfam00676		303	pfam00676, E1_dh, Dehydrogenase E1 component	2e-70
pfam02779		172	pfam02779, Transket_pyr, Transketolase, pyrimidine	3e-49
smart00861		136	smart00861, Transket_pyr, Transketolase, pyrimidin	9e-21
TIGR03182		315	TIGR03182, PDH_E1_alph_y, pyruvate dehydrogenase E	6e-10
cd02000		293	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosph	7e-10
PRK12270		1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	6e-07
COG1071		358	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogena	7e-05

>gnl\|CDD\|236499 PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	Back alignment and domain information

 Score = 1161 bits (3005), Expect = 0.0
 Identities = 420/928 (45%), Positives = 541/928 (58%), Gaps = 111/928 (11%)

Query: 47  FLNGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSAGALPEDPKSV-HASWDAFFRSSS 105
           FL GA+A Y+EE+Y  + +DP SV   W AFF       LP     V H++    FR  +
Sbjct: 13  FLFGANAAYIEELYEQYLKDPDSVDEEWRAFFD-----GLPGVAPDVAHSAVRESFRRLA 67

Query: 106 AGALPGQAYQPPPTLAPPSGNQVPISSLAPFVGGASSHFNEPLSEKIIDDHLAVQALIRS 165
             A    A                                      + D  + V  LI +
Sbjct: 68  KPARVSSA--------------------------------------VSDPQVKVLQLINA 89

Query: 166 YQIRGHHIAQLDPLGIQAADLDDKHPQ-ELIFHNFWPSSISYAQQLQHKVADMMQKETDM 224
           Y+ RGH  A LDPLG+         P+ +  F+                       E D+
Sbjct: 90  YRFRGHLAANLDPLGLWKRP---DVPELDPAFYGL--------------------TEADL 126

Query: 225 EKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLETPG 284
           ++ F   + +   GKE A  LREII+ L+ TYC SIG E+M I+  E+  W++Q++E+  
Sbjct: 127 DRTF--NTGSLALGKETA-TLREIIEALKKTYCGSIGVEYMHISDPEERRWLQQRIESGR 183

Query: 285 IMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGV 344
             + S ++K+ IL RLT A GFE FL  K+  +KRF LEG E LIP + ++I ++ +LGV
Sbjct: 184 P-SFSAEEKKAILERLTAAEGFERFLHTKFVGQKRFSLEGGESLIPMLDEIIRRAGKLGV 242

Query: 345 ESVVMGMPHRGRLNVLANVCRKPLEQIFTQFA--ALEAADDGSGDVKYHLGTYIERLNRV 402
           + +V+GM HRGRLNVL NV  KP   +F +F          GSGDVKYHLG   +R    
Sbjct: 243 KEIVIGMAHRGRLNVLVNVLGKPPRDLFAEFEGKHGPDEVLGSGDVKYHLGFSSDR--ET 300

Query: 403 TNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGD-GEGKKVMSILLHGDAAFCGQGVV 461
               + L++  NPSHLE V+PVV+G  RA Q  RGD  + KKV+ IL+HGDAAF GQGVV
Sbjct: 301 DGGEVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDGQDRKKVLPILIHGDAAFAGQGVV 360

Query: 462 FETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDDP 521
            ET +LS L  Y T GTIHIV+NNQIGFTT P   RS+ YCTDVA++V APIFHVN DDP
Sbjct: 361 AETLNLSQLRGYRTGGTIHIVINNQIGFTTSPPDDRSTPYCTDVAKMVQAPIFHVNGDDP 420

Query: 522 EAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKY 581
           EAV+    LA E+R  F KDVVID+V YRR+GHNE DEP FTQPLMYK IKK P   + Y
Sbjct: 421 EAVVFATRLALEYRQKFKKDVVIDLVCYRRHGHNEGDEPSFTQPLMYKKIKKHPTTRELY 480

Query: 582 ANKLIEEKVVTEEQVKDVKEKYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPLK 641
           A+KL+ E V+TEE+  ++  +Y    +  +   ++    +  DWL   WS  + G +   
Sbjct: 481 ADKLVAEGVITEEEADEMVNEYRDALDAGFEVVKEW---RPADWLAGDWS-PYLGHEWDD 536

Query: 642 VSTTGINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVES-RTVDWALGEAMA 700
              TG+    L  + ++ ++ P     F +H  +++IL+ R +M E  + +DW + EA+A
Sbjct: 537 PVDTGVPLERLKELAEKLTTVPEG---FKVHPKVKKILEDRREMAEGEKPIDWGMAEALA 593

Query: 701 FGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSSL 760
           F SLL EG  VRLSGQD  RGTFSHRH VLH Q     TY PLN+L   QA + V +S L
Sbjct: 594 FASLLDEGYPVRLSGQDSGRGTFSHRHAVLHDQ-KTGETYIPLNHLSEGQASFEVYDSPL 652

Query: 761 SEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLP 820
           SE  VLGFE G+S   PNTLV WEAQFGDF N AQ +IDQFISSG+ KW R SGLVMLLP
Sbjct: 653 SEEAVLGFEYGYSTAEPNTLVIWEAQFGDFANGAQVVIDQFISSGEQKWGRLSGLVMLLP 712

Query: 821 HGLEGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLF 880
           HG EG GPEHSSARLERFLQ+  ++                     N  + N TTPA  F
Sbjct: 713 HGYEGQGPEHSSARLERFLQLCAED---------------------NMQVCNPTTPAQYF 751

Query: 881 HILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVE 940
           H+LRRQ   PFRKPLV+MTPKSLLRHP A SS +++ EG+ F  VI D  I E     V+
Sbjct: 752 HLLRRQALRPFRKPLVVMTPKSLLRHPLAVSSLEELAEGS-FQPVIGD--IDELDPKKVK 808

Query: 941 KLVFCSGKVYYDLIKARNDNNLGDKIAV 968
           ++V CSGKVYYDL++AR    + D +A+
Sbjct: 809 RVVLCSGKVYYDLLEARRKRGIDD-VAI 835

Length = 924

>gnl\|CDD\|223641 COG0567, SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|161785 TIGR00239, 2oxo_dh_E1, 2-oxoglutarate dehydrogenase, E1 component	Back alignment and domain information

>gnl\|CDD\|238974 cd02016, TPP_E1_OGDC_like, Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC)	Back alignment and domain information

>gnl\|CDD\|201386 pfam00676, E1_dh, Dehydrogenase E1 component	Back alignment and domain information

>gnl\|CDD\|217226 pfam02779, Transket_pyr, Transketolase, pyrimidine binding domain	Back alignment and domain information

>gnl\|CDD\|214865 smart00861, Transket_pyr, Transketolase, pyrimidine binding domain	Back alignment and domain information

>gnl\|CDD\|234139 TIGR03182, PDH_E1_alph_y, pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>gnl\|CDD\|238958 cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	Back alignment and domain information

>gnl\|CDD\|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|223997 COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		968
KOG0450\|consensus		1017		100.0
PRK12270		1228	kgd alpha-ketoglutarate decarboxylase; Reviewed	100.0
COG0567		906	SucA 2-oxoglutarate dehydrogenase complex, dehydro	100.0
TIGR00239		929	2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon	100.0
PRK09404		924	sucA 2-oxoglutarate dehydrogenase E1 component; Re	100.0
KOG0451\|consensus		913		100.0
cd02016		265	TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami	100.0
COG1071		358	AcoA Pyruvate/2-oxoglutarate dehydrogenase complex	100.0
PF00676		300	E1_dh: Dehydrogenase E1 component; InterPro: IPR00	100.0
PLN02269		362	Pyruvate dehydrogenase E1 component subunit alpha	100.0
PLN02374		433	pyruvate dehydrogenase (acetyl-transferring)	100.0
TIGR03182		315	PDH_E1_alph_y pyruvate dehydrogenase E1 component,	100.0
CHL00149		341	odpA pyruvate dehydrogenase E1 component alpha sub	100.0
KOG0225\|consensus		394		100.0
cd02000		293	TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP)	100.0
TIGR03181		341	PDH_E1_alph_x pyruvate dehydrogenase E1 component,	100.0
KOG1182\|consensus		432		100.0
PRK12315		581	1-deoxy-D-xylulose-5-phosphate synthase; Provision	100.0
COG0022		324	AcoB Pyruvate/2-oxoglutarate dehydrogenase complex	100.0
TIGR00204		617	dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s	100.0
PRK05899		624	transketolase; Reviewed	99.97
PRK05444		580	1-deoxy-D-xylulose-5-phosphate synthase; Provision	99.97
KOG0525\|consensus		362		99.97
KOG0524\|consensus		359		99.96
TIGR00232		653	tktlase_bact transketolase, bacterial and yeast. T	99.96
PRK12571		641	1-deoxy-D-xylulose-5-phosphate synthase; Provision	99.96
PLN02582		677	1-deoxy-D-xylulose-5-phosphate synthase	99.95
PLN02234		641	1-deoxy-D-xylulose-5-phosphate synthase	99.95
PRK12754		663	transketolase; Reviewed	99.93
PRK12753		663	transketolase; Reviewed	99.93
PTZ00089		661	transketolase; Provisional	99.93
PLN02790		654	transketolase	99.92
PF02779		178	Transket_pyr: Transketolase, pyrimidine binding do	99.9
cd07036		167	TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding	99.9
PTZ00182		355	3-methyl-2-oxobutanate dehydrogenase; Provisional	99.89
PLN02225		701	1-deoxy-D-xylulose-5-phosphate synthase	99.88
CHL00144		327	odpB pyruvate dehydrogenase E1 component beta subu	99.87
PRK11892		464	pyruvate dehydrogenase subunit beta; Provisional	99.87
PRK09212		327	pyruvate dehydrogenase subunit beta; Validated	99.87
PLN02683		356	pyruvate dehydrogenase E1 component subunit beta	99.83
PRK05261		785	putative phosphoketolase; Provisional	99.72
cd07033		156	TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai	99.72
smart00861		168	Transket_pyr Transketolase, pyrimidine binding dom	99.7
TIGR03186		889	AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S	99.67
cd02007		195	TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s	99.66
PRK13012		896	2-oxoacid dehydrogenase subunit E1; Provisional	99.62
KOG0523\|consensus		632		99.58
PRK09405		891	aceE pyruvate dehydrogenase subunit E1; Reviewed	99.57
cd02012		255	TPP_TK Thiamine pyrophosphate (TPP) family, Transk	99.56
COG1154		627	Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m	99.55
COG0021		663	TktA Transketolase [Carbohydrate transport and met	99.55
cd02011		227	TPP_PK Thiamine pyrophosphate (TPP) family, Phosph	99.49
PRK11864		300	2-ketoisovalerate ferredoxin oxidoreductase subuni	99.42
PF00456		332	Transketolase_N: Transketolase, thiamine diphospha	99.27
COG3959		243	Transketolase, N-terminal subunit [Carbohydrate tr	99.2
cd02017		386	TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam	99.12
cd00568		168	TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa	99.1
TIGR00759		885	aceE pyruvate dehydrogenase E1 component, homodime	99.09
cd02002		178	TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC	99.03
cd02004		172	TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam	98.98
cd03372		179	TPP_ComE Thiamine pyrophosphate (TPP) family, ComE	98.91
cd02013		196	TPP_Xsc_like Thiamine pyrophosphate (TPP) family,	98.88
cd02014		178	TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv	98.87
cd02015		186	TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet	98.85
PRK07524		535	hypothetical protein; Provisional	98.78
cd02006		202	TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s	98.73
PRK08327		569	acetolactate synthase catalytic subunit; Validated	98.7
cd02005		183	TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family,	98.69
PRK06725		570	acetolactate synthase 3 catalytic subunit; Validat	98.65
cd03371		188	TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp	98.63
PRK06163		202	hypothetical protein; Provisional	98.63
cd02001		157	TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil	98.61
cd02008		178	TPP_IOR_alpha Thiamine pyrophosphate (TPP) family,	98.61
PF02775		153	TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter	98.6
cd02010		177	TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto	98.57
cd02003		205	TPP_IolD Thiamine pyrophosphate (TPP) family, IolD	98.56
TIGR03846		181	sulfopy_beta sulfopyruvate decarboxylase, beta sub	98.51
PRK07092		530	benzoylformate decarboxylase; Reviewed	98.48
PRK06546		578	pyruvate dehydrogenase; Provisional	98.46
cd02009		175	TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa	98.46
cd03375		193	TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o	98.44
cd02018		237	TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru	98.43
PRK08266		542	hypothetical protein; Provisional	98.42
PRK11865		299	pyruvate ferredoxin oxidoreductase subunit beta; P	98.41
PF13292		270	DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn	98.41
PRK11269		591	glyoxylate carboligase; Provisional	98.38
PRK07710		571	acetolactate synthase catalytic subunit; Reviewed	98.38
PRK12474		518	hypothetical protein; Provisional	98.36
PRK05778		301	2-oxoglutarate ferredoxin oxidoreductase subunit b	98.35
PRK07525		588	sulfoacetaldehyde acetyltransferase; Validated	98.35
PRK06154		565	hypothetical protein; Provisional	98.35
PRK08155		564	acetolactate synthase catalytic subunit; Validated	98.35
TIGR02720		575	pyruv_oxi_spxB pyruvate oxidase. Members of this f	98.33
cd03376		235	TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam	98.33
PRK09628		277	oorB 2-oxoglutarate-acceptor oxidoreductase subuni	98.32
PRK06112		578	acetolactate synthase catalytic subunit; Validated	98.32
PRK08199		557	thiamine pyrophosphate protein; Validated	98.3
COG0028		550	IlvB Thiamine pyrophosphate-requiring enzymes [ace	98.3
PRK07586		514	hypothetical protein; Validated	98.29
TIGR01504		588	glyox_carbo_lig glyoxylate carboligase. Glyoxylate	98.29
PRK09124		574	pyruvate dehydrogenase; Provisional	98.29
COG3958		312	Transketolase, C-terminal subunit [Carbohydrate tr	98.28
PRK07064		544	hypothetical protein; Provisional	98.26
PRK06882		574	acetolactate synthase 3 catalytic subunit; Validat	98.26
CHL00099		585	ilvB acetohydroxyacid synthase large subunit	98.26
TIGR00118		558	acolac_lg acetolactate synthase, large subunit, bi	98.24
TIGR02418		539	acolac_catab acetolactate synthase, catabolic. Ace	98.22
TIGR03297		361	Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi	98.18
PRK08527		563	acetolactate synthase 3 catalytic subunit; Validat	98.18
PRK06457		549	pyruvate dehydrogenase; Provisional	98.18
PRK11869		280	2-oxoacid ferredoxin oxidoreductase subunit beta;	98.17
TIGR03457		579	sulphoacet_xsc sulfoacetaldehyde acetyltransferase	98.16
PRK07979		574	acetolactate synthase 3 catalytic subunit; Validat	98.15
PRK09107		595	acetolactate synthase 3 catalytic subunit; Validat	98.15
PRK05858		542	hypothetical protein; Provisional	98.15
PRK07418		616	acetolactate synthase 3 catalytic subunit; Reviewe	98.14
PRK08322		547	acetolactate synthase; Reviewed	98.12
PRK06965		587	acetolactate synthase 3 catalytic subunit; Validat	98.11
PLN02573		578	pyruvate decarboxylase	98.11
PLN02470		585	acetolactate synthase	98.1
PRK08617		552	acetolactate synthase; Reviewed	98.1
PRK08979		572	acetolactate synthase 3 catalytic subunit; Validat	98.07
PRK06466		574	acetolactate synthase 3 catalytic subunit; Validat	98.04
PRK06456		572	acetolactate synthase catalytic subunit; Reviewed	98.02
TIGR03394		535	indol_phenyl_DC indolepyruvate/phenylpyruvate deca	98.02
TIGR03254		554	oxalate_oxc oxalyl-CoA decarboxylase. In a number	98.02
TIGR02177		287	PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta	98.01
PRK09259		569	putative oxalyl-CoA decarboxylase; Validated	98.01
PRK06276		586	acetolactate synthase catalytic subunit; Reviewed	97.99
PRK08978		548	acetolactate synthase 2 catalytic subunit; Reviewe	97.99
PRK07449		568	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1	97.98
PRK08611		576	pyruvate oxidase; Provisional	97.98
PRK11867		286	2-oxoglutarate ferredoxin oxidoreductase subunit b	97.97
PRK07789		612	acetolactate synthase 1 catalytic subunit; Validat	97.96
TIGR03393		539	indolpyr_decarb indolepyruvate decarboxylase, Erwi	97.94
PRK06048		561	acetolactate synthase 3 catalytic subunit; Reviewe	97.93
PRK08273		597	thiamine pyrophosphate protein; Provisional	97.9
PRK11866		279	2-oxoacid ferredoxin oxidoreductase subunit beta;	97.89
COG3957		793	Phosphoketolase [Carbohydrate transport and metabo	97.82
PRK07282		566	acetolactate synthase catalytic subunit; Reviewed	97.79
TIGR03336		595	IOR_alpha indolepyruvate ferredoxin oxidoreductase	97.62
cd06586		154	TPP_enzyme_PYR Pyrimidine (PYR) binding domain of	97.6
PLN02980		1655	2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi	97.39
KOG1185\|consensus		571		97.14
PF09364		379	XFP_N: XFP N-terminal domain; InterPro: IPR018970	96.87
COG3961		557	Pyruvate decarboxylase and related thiamine pyroph	96.45
KOG4166\|consensus		675		95.64
COG1013		294	PorB Pyruvate:ferredoxin oxidoreductase and relate	95.16
COG3960		592	Glyoxylate carboligase [General function predictio	94.33
cd03377		365	TPP_PFOR_PNO Thiamine pyrophosphate (TPP family),	93.79
COG2609		887	AceE Pyruvate dehydrogenase complex, dehydrogenase	93.14
PF01855		230	POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta	91.5
KOG1184\|consensus		561		90.23
cd07039		164	TPP_PYR_POX Pyrimidine (PYR) binding domain of POX	90.09
TIGR03336		595	IOR_alpha indolepyruvate ferredoxin oxidoreductase	88.9
cd07038		162	TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding dom	88.47
TIGR02176		1165	pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid	88.17
PRK08366		390	vorA 2-ketoisovalerate ferredoxin oxidoreductase s	88.14
PRK09622		407	porA pyruvate flavodoxin oxidoreductase subunit al	87.27
PF02776		172	TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter	87.16
TIGR03710		562	OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha s	87.05
PRK08659		376	2-oxoglutarate ferredoxin oxidoreductase subunit a	86.89
cd06586		154	TPP_enzyme_PYR Pyrimidine (PYR) binding domain of	86.51
cd07035		155	TPP_PYR_POX_like Pyrimidine (PYR) binding domain o	85.53
cd07034		160	TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi	85.0
PRK07119		352	2-ketoisovalerate ferredoxin reductase; Validated	84.24
PRK08659		376	2-oxoglutarate ferredoxin oxidoreductase subunit a	83.22
COG4231		640	Indolepyruvate ferredoxin oxidoreductase, alpha an	82.47
PRK08367		394	porA pyruvate ferredoxin oxidoreductase subunit al	80.23

>KOG0450\|consensus	Back alignment and domain information

Probab=100.00  E-value=1.5e-245  Score=2044.33  Aligned_cols=878  Identities=68%  Similarity=1.119  Sum_probs=805.9

Q ss_pred             ccCCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcchHhHHHHHhccCCCCCCCCCCCCCChhHHHHhhhccCCCCCCCCC
Q psy8742          36 RQQSSVPAAEPFLNGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSAGALPEDPKSVHASWDAFFRSSSAGALPGQAYQ  115 (968)
Q Consensus        36 ~~~~~~~~~~s~l~g~Na~YIEelY~~yl~DP~SVd~sW~~~F~~l~~~~~~~~~~~~~~~~~~~F~~~~~~~~~~~~~~  115 (968)
                      |........++||+|+++.||||||+.|++||+|||.||++||++.+.++.                      ++.++++
T Consensus        39 r~~~~~~~td~Fl~g~ss~YveEmy~AW~~dP~SVh~SWDayFrn~~~~~~----------------------~~~~a~~   96 (1017)
T KOG0450|consen   39 RSVAASVATDPFLSGTSSSYVEEMYRAWLEDPNSVHKSWDAYFRNVSAGAP----------------------PPAQASQ   96 (1017)
T ss_pred             ccccCcccccccccCcchHHHHHHHHHHHcCCchhhhhHHHHHHhcccCCC----------------------Ccccccc
Confidence            334566678999999999999999999999999999999996655544321                      1223344


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcccCCCCCCCCchhHHHHhHHHHHHHHHHHHHHccccccccCCCCCCccCCCC----CCC
Q psy8742         116 PPPTLAPPSGNQVPISSLAPFVGGASSHFNEPLSEKIIDDHLAVQALIRSYQIRGHHIAQLDPLGIQAADLDD----KHP  191 (968)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~li~ayr~~GH~~A~ldPL~~~~~~~~~----~~~  191 (968)
                      +|+.....    +..+......  .   -....+.+.+.++++|+.||+||+.+||..|+|||||+...+.+.    ..+
T Consensus        97 ~p~~~~~~----~~~t~~~~~~--~---~~t~~s~~~v~~hl~vqlLiRaYQirGH~~A~LDPLGi~~~~~~~~~p~~i~  167 (1017)
T KOG0450|consen   97 APLSRSAA----VAGTQSAVAA--R---PNTGISDKTVEDHLKVQLLIRAYQIRGHHKAKLDPLGINDADLDSSVPADIP  167 (1017)
T ss_pred             CCCccccc----cccccccccc--c---cCCCcccccHHHHHHHHHHHHHHHhcccccccCCccccccccccccCCCCCC
Confidence            44322110    0000000000  0   000112356789999999999999999999999999985443221    123


Q ss_pred             cccccccCCCCChhHHHHhhhhhccCCCCcccccceeccCCcccccCCCCCCCHHHHHHHHHHHccCcccccccccCCHH
Q psy8742         192 QELIFHNFWPSSISYAQQLQHKVADMMQKETDMEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLE  271 (968)
Q Consensus       192 ~~l~~~~~~~~~~~~~~~~~~~~~~~gl~~~Dl~~~~~~~~~~~~~~~~~~~~l~~i~~~L~~~Ycg~ig~E~~hi~~~e  271 (968)
                      ++|        .+.+|          ||+|.|||++|.++..+|++++++.+|||||+++|+++||++||+|||||.|.+
T Consensus       168 ~~~--------~l~~Y----------gf~E~DLDref~L~~t~Fi~~~~~~ltLreIl~rlE~~YC~~igvEfmhI~~~e  229 (1017)
T KOG0450|consen  168 EEL--------TLAFY----------GFTEADLDREFHLPTTTFIGGGESSLTLREILRRLEKAYCGSIGVEFMHINDLE  229 (1017)
T ss_pred             hhh--------hhhhc----------CCchhhccceeccCCcccccCCCccccHHHHHHHHHHHhhccceeEEEeeCcHH
Confidence            445        78899          999999999999988899998888999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCcchhhHHHHHHHHHHhhhcCCCcEEecc
Q psy8742         272 QCNWIRQKLETPGIMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGVESVVMGM  351 (968)
Q Consensus       272 ~r~Wl~~~~E~~~~~~ls~e~~~~il~~M~~aR~fE~~l~~~~~~~Krfg~eG~Ea~i~~l~~li~~a~~~g~~divigm  351 (968)
                      +++||++|||++....++.|+++-||.+|+++..||+||.+||+..||||+||||++||||.++|+.+..+|++++|+||
T Consensus       230 qcnWir~k~EtP~~~q~s~e~k~~il~RL~~st~FE~FLa~Kw~seKRFGLEGcE~lIP~mK~iiDrS~elGVe~iviGM  309 (1017)
T KOG0450|consen  230 QCNWIRQKFETPGPMQYSHEQKRVILDRLTRSTRFEEFLATKWPSEKRFGLEGCEVLIPAMKTIIDRSSELGVESIVIGM  309 (1017)
T ss_pred             HhHHHHHhccCCCccccCHHHHHHHHHHHHHhhHHHHHHhhhCCccccccccchhhhhhHHHHHhhhhhhcCchheEecC
Confidence            99999999999988899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccHHHHHHHhcCCCHHHHHHHhcCCCCCCCCCCCcccccccccccccccCCcceeeeeecCCCCccccCchhhhHhhH
Q psy8742         352 PHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRA  431 (968)
Q Consensus       352 ~HRgr~~~La~g~gkp~~~ifae~g~~~~~~~G~GdV~~Hlg~~~~~~~~~~g~~i~~~i~~NpShLea~~PvA~G~A~A  431 (968)
                      +||||+|+|+|+++||+++||.||.+..+...|+||||||||..-.+.+...||.|++++|+||||||++.||++|++||
T Consensus       310 pHRGRLNvL~NVvRKpl~qIfseF~g~~~~DeGSGDVKYHLG~~~~R~~r~s~k~i~LslVANPSHLEA~DPVV~GKtrA  389 (1017)
T KOG0450|consen  310 PHRGRLNVLANVVRKPLEQIFSEFSGLEAADEGSGDVKYHLGMYYERPNRVSGKNITLSLVANPSHLEAVDPVVMGKTRA  389 (1017)
T ss_pred             CccchhHHHHHHHhhHHHHHHHhccCCCCCcCCCCceeeeeccccccccccCCceeEEEEecCchhhcccCceeechHHH
Confidence            99999999999999999999999944555556999999999998888776689999999999999999999999999999


Q ss_pred             hHhhcCCCCCceEEEEEEeCCccccCcchHHHHHHhCCCCCCCcccEEEEEEcCCcccccCCCcccccccHhHhhhhcCC
Q psy8742         432 EQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNA  511 (968)
Q Consensus       432 ~q~~~~~~~~~~~v~v~~hGDgAfsgQGvv~EaLNlA~LP~y~~gGvIfVVeNNqig~TT~~~~~rss~~~td~Ak~~gi  511 (968)
                      .|++++|.++++++.|++||||||+|||+|||||+|+.||+|+||||||||+||||||||+|..+||++||||+||..++
T Consensus       390 ~q~y~~D~~~~k~m~ILiHGDaaFAgQGVVyET~hls~LP~YtT~GTvHvVvNNQIgFTTDPR~aRSspYcTDvar~v~a  469 (1017)
T KOG0450|consen  390 EQFYTGDEEGKKVMGILIHGDAAFAGQGVVYETFHLSDLPSYTTGGTVHVVVNNQIGFTTDPRFARSSPYCTDVARVVNA  469 (1017)
T ss_pred             HHHhccccccceeEEEEEecchhhccCceEEEeeccccCCCcccCCeEEEEEccccccccCcccccCCCCchhHHHHhCC
Confidence            99999998999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEeCCCHHHHHHHHHHHHHHhhcCCCcEEEEEEeecCCCCCCCCCCCCCCHHHHHHHHhCCCHHHHHHHHHHHccCC
Q psy8742         512 PIFHVNSDDPEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYANKLIEEKVV  591 (968)
Q Consensus       512 P~~hVDGnD~eAV~~a~~~Ave~rr~~~gPvlIel~tYR~~GHne~Ddp~yt~p~~y~~i~~~~dpi~~y~~~Li~~Gv~  591 (968)
                      ||||||+||||||..+|+.|.|||.+|++||+||++|||++||||.|+|+||||.||+.|+++++.++.|.++|+.+|.+
T Consensus       470 PIFHVNaDD~EAV~~vc~vAAeWR~tFh~DvVVDlVcyRR~GHNE~DeP~FTQPlMYk~I~k~~~~l~~Y~ekLl~egtv  549 (1017)
T KOG0450|consen  470 PIFHVNADDPEAVMHVCKVAAEWRKTFHKDVVVDLVCYRRHGHNEIDEPMFTQPLMYKQIRKHKPVLQKYAEKLLSEGTV  549 (1017)
T ss_pred             CeEeecCCChHHHHHHHHHHHHHHHHhccCeEEEEEEEeecCCCcccCccccchHHHHHHHcCCcHHHHHHHHHHhcCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccccCCCCCCCCCCCC---CCccCCCCCCHHHHHHHHhhhcCCCCCCch
Q psy8742         592 TEEQVKDVKEKYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKD---PLKVSTTGINENTLVHIGKRFSSPPPNATE  668 (968)
Q Consensus       592 t~ee~~~i~~e~~~~l~~a~~~A~~~~~~~~~~~~~~~w~~~~~~~~---~~~~~~tgv~~~~l~~i~~~~~~~P~~~~~  668 (968)
                      +++++++..+.+...+++|++.++.+......+|++.+|.+++.|..   ..+.++||+..+.|+.||+.+.++|   |+
T Consensus       550 s~~evd~~~~k~~~I~eeafe~sKd~~~~~~rdWL~spW~gF~spd~~~~i~~~~~Tgv~~e~L~~ig~~~ss~P---E~  626 (1017)
T KOG0450|consen  550 SQQEVDEEIKKYDNILEEAFERSKDYKPLHIRDWLDSPWPGFFSPDGQPKILPCPSTGVKEEILKHIGKVASSVP---EG  626 (1017)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhccccchhhhhhhcCCCccccCccCCCccccCCCCCCCHHHHHHHHHhhccCC---cc
Confidence            99999999999999999999999998766668999999999998642   2234579999999999999999999   99


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhchhhhhhhHhhhhhhhhcCCcEEEeccccCCCccccccceeeeeccCCceeecCCCCCC
Q psy8742         669 FVIHKGIERILKARLQMVESRTVDWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYP  748 (968)
Q Consensus       669 f~~h~~l~~~l~~r~~~~~~~~idwa~aE~LA~~sLl~eg~~Vrl~GqDv~rGtFshRHav~~dq~~~~~~~~~~~~l~~  748 (968)
                      |.+|+.|+|+++.|.+|+++..||||+||+|||||||.||.+||||||||+||||||||+|||||+++..+|.||++|.+
T Consensus       627 F~~Hrgl~Ril~~R~~mi~~~~iDwal~EalAFgsLl~EG~hVRlSGQDVERGTFShRH~VLHDQ~~d~~~y~PlnhL~~  706 (1017)
T KOG0450|consen  627 FKIHRGLKRILKNRAQMIKSEGVDWALAEALAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHDQEVDKRTYIPLNHLWP  706 (1017)
T ss_pred             cchhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHhcCceEEeecccccccccccchhhhcccccCcceecchhhcCC
Confidence            99999999999999999999889999999999999999999999999999999999999999999998789999999999


Q ss_pred             CCCCcEeecCCcchHHHHHHhhhcccCCCCccccccchhhhhHhhhhHHHHHHHhhhccccccccCcEEEcCccCCCCCc
Q psy8742         749 DQAPYTVCNSSLSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGLEGMGP  828 (968)
Q Consensus       749 ~~g~~~v~nspLsE~avlG~~~G~s~~g~~~l~iWE~qfgDF~~~aQvi~Dq~i~~~~~kw~~~~~lv~~lP~G~~g~Gp  828 (968)
                      .|+++.|+||.|||+||||||+||||++|+.|||||||||||+|+||+||||||++|++||.+++||||+|||||+|+||
T Consensus       707 ~Qa~ytV~NSSLSEygVLGFElGYsm~sPNaLVlWEAQFGDFaNtAQ~IiDQFIssGqaKW~rqsGlVllLPHGyeG~GP  786 (1017)
T KOG0450|consen  707 NQAPYTVCNSSLSEYGVLGFELGYSMASPNALVLWEAQFGDFANTAQCIIDQFISSGQAKWVRQSGLVLLLPHGYEGMGP  786 (1017)
T ss_pred             CCCceeeeccchhhhheecceecccccCCCceEEeehhhccccccchhhHHhHhccchhhhhhhcCeEEEccCCcCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCChHHHHhcccCCCCcccccccchhhhhhhcccCCCeEEEecCCHhHHHHHHHHHHhcCCCCcEEEEecccCcCCCC
Q psy8742         829 EHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPE  908 (968)
Q Consensus       829 eHSs~r~er~lql~~~~~~~~p~~~~~~~~~~~~~~~~n~~V~~pstpa~~~hlLr~q~~~~~r~Pli~~~pK~Llr~~~  908 (968)
                      ||||+|+|||||||+|||+.+|.   ..+++.+|++++||+||||||||||||+|||||+++||||||+|+||+|||||.
T Consensus       787 EHSSaR~ERfLQm~nddp~~~p~---~~~~~~~Ql~dcNw~vvn~tTPaNyfHvLRRQi~~~FRKPliif~pKsLLRHp~  863 (1017)
T KOG0450|consen  787 EHSSARPERFLQMSNDDPDVFPD---EEEFLQRQLQDCNWQVVNCTTPANYFHVLRRQIHRPFRKPLIIFTPKSLLRHPE  863 (1017)
T ss_pred             ccccccHHHHHHhccCCCccCCc---ccHHHHHHHhcCCeEEEecCChHHHHHHHHHHhhhcccCceEEeccHHhhcCcc
Confidence            99999999999999999999991   223789999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCCceEEeccCCCccccCCCCccEEEEecchhHHHHHHHHHhcCCCCCccC
Q psy8742         909 AKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFCSGKVYYDLIKARNDNNLGDKIAV  968 (968)
Q Consensus       909 a~s~l~e~~~g~~F~~vi~d~~~~~~~~~~v~rvilcsGkvyydl~~~r~~~~~~~~vai  968 (968)
                      |+|+++||.+|+.||.||+|......++++|||||||||||||||.++|++.++.++|||
T Consensus       864 arS~~~ef~~g~~fq~vi~e~g~~~~~pe~vkrlv~csGkVyydL~k~Rk~~~~~~~vAi  923 (1017)
T KOG0450|consen  864 ARSSFSEFDEGTGFQRVIPEDGKAAQNPENVKRLVFCSGKVYYDLTKERKEVGLEGDVAI  923 (1017)
T ss_pred             ccCCHHHhccCCCCceeccccccccCChhhceEEEEecceEehhhhHHHHhcCcccceeE
Confidence            999999999999999999997766778999999999999999999999999997789997

>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]	Back alignment and domain information

>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component	Back alignment and domain information

>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed	Back alignment and domain information

>KOG0451\|consensus	Back alignment and domain information

>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC)	Back alignment and domain information

>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	Back alignment and domain information

>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex	Back alignment and domain information

>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha	Back alignment and domain information

>PLN02374 pyruvate dehydrogenase (acetyl-transferring)	Back alignment and domain information

>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed	Back alignment and domain information

>KOG0225\|consensus	Back alignment and domain information

>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	Back alignment and domain information

>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>KOG1182\|consensus	Back alignment and domain information

>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	Back alignment and domain information

>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PRK05899 transketolase; Reviewed	Back alignment and domain information

>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>KOG0525\|consensus	Back alignment and domain information

>KOG0524\|consensus	Back alignment and domain information

>TIGR00232 tktlase_bact transketolase, bacterial and yeast	Back alignment and domain information

>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PRK12754 transketolase; Reviewed	Back alignment and domain information

>PRK12753 transketolase; Reviewed	Back alignment and domain information

>PTZ00089 transketolase; Provisional	Back alignment and domain information

>PLN02790 transketolase	Back alignment and domain information

>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2	Back alignment and domain information

>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins	Back alignment and domain information

>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional	Back alignment and domain information

>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated	Back alignment and domain information

>PRK11892 pyruvate dehydrogenase subunit beta; Provisional	Back alignment and domain information

>PRK09212 pyruvate dehydrogenase subunit beta; Validated	Back alignment and domain information

>PLN02683 pyruvate dehydrogenase E1 component subunit beta	Back alignment and domain information

>PRK05261 putative phosphoketolase; Provisional	Back alignment and domain information

>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	Back alignment and domain information

>smart00861 Transket_pyr Transketolase, pyrimidine binding domain	Back alignment and domain information

>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase	Back alignment and domain information

>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis	Back alignment and domain information

>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional	Back alignment and domain information

>KOG0523\|consensus	Back alignment and domain information

>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed	Back alignment and domain information

>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	Back alignment and domain information

>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]	Back alignment and domain information

>COG0021 TktA Transketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O	Back alignment and domain information

>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2	Back alignment and domain information

>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E	Back alignment and domain information

>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor	Back alignment and domain information

>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type	Back alignment and domain information

>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC)	Back alignment and domain information

>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL)	Back alignment and domain information

>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE)	Back alignment and domain information

>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc)	Back alignment and domain information

>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions	Back alignment and domain information

>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS	Back alignment and domain information

>PRK07524 hypothetical protein; Provisional	Back alignment and domain information

>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl)	Back alignment and domain information

>PRK08327 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC)	Back alignment and domain information

>PRK06725 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins	Back alignment and domain information

>PRK06163 hypothetical protein; Provisional	Back alignment and domain information

>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase)	Back alignment and domain information

>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit	Back alignment and domain information

>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation	Back alignment and domain information

>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv	Back alignment and domain information

>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit	Back alignment and domain information

>PRK07092 benzoylformate decarboxylase; Reviewed	Back alignment and domain information

>PRK06546 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD)	Back alignment and domain information

>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	Back alignment and domain information

>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways	Back alignment and domain information

>PRK08266 hypothetical protein; Provisional	Back alignment and domain information

>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B	Back alignment and domain information

>PRK11269 glyoxylate carboligase; Provisional	Back alignment and domain information

>PRK07710 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK12474 hypothetical protein; Provisional	Back alignment and domain information

>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated	Back alignment and domain information

>PRK07525 sulfoacetaldehyde acetyltransferase; Validated	Back alignment and domain information

>PRK06154 hypothetical protein; Provisional	Back alignment and domain information

>PRK08155 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>TIGR02720 pyruv_oxi_spxB pyruvate oxidase	Back alignment and domain information

>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	Back alignment and domain information

>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed	Back alignment and domain information

>PRK06112 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK08199 thiamine pyrophosphate protein; Validated	Back alignment and domain information

>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]	Back alignment and domain information

>PRK07586 hypothetical protein; Validated	Back alignment and domain information

>TIGR01504 glyox_carbo_lig glyoxylate carboligase	Back alignment and domain information

>PRK09124 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK07064 hypothetical protein; Provisional	Back alignment and domain information

>PRK06882 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>CHL00099 ilvB acetohydroxyacid synthase large subunit	Back alignment and domain information

>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type	Back alignment and domain information

>TIGR02418 acolac_catab acetolactate synthase, catabolic	Back alignment and domain information

>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase	Back alignment and domain information

>PRK08527 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06457 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase	Back alignment and domain information

>PRK07979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK09107 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK05858 hypothetical protein; Provisional	Back alignment and domain information

>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK08322 acetolactate synthase; Reviewed	Back alignment and domain information

>PRK06965 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PLN02573 pyruvate decarboxylase	Back alignment and domain information

>PLN02470 acetolactate synthase	Back alignment and domain information

>PRK08617 acetolactate synthase; Reviewed	Back alignment and domain information

>PRK08979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06466 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06456 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family	Back alignment and domain information

>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase	Back alignment and domain information

>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family	Back alignment and domain information

>PRK09259 putative oxalyl-CoA decarboxylase; Validated	Back alignment and domain information

>PRK06276 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed	Back alignment and domain information

>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	Back alignment and domain information

>PRK08611 pyruvate oxidase; Provisional	Back alignment and domain information

>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed	Back alignment and domain information

>PRK07789 acetolactate synthase 1 catalytic subunit; Validated	Back alignment and domain information

>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family	Back alignment and domain information

>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK08273 thiamine pyrophosphate protein; Provisional	Back alignment and domain information

>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>COG3957 Phosphoketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK07282 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit	Back alignment and domain information

>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes	Back alignment and domain information

>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding	Back alignment and domain information

>KOG1185\|consensus	Back alignment and domain information

>PF09364 XFP_N: XFP N-terminal domain; InterPro: IPR018970 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria	Back alignment and domain information

>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only]	Back alignment and domain information

>KOG4166\|consensus	Back alignment and domain information

>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion]	Back alignment and domain information

>COG3960 Glyoxylate carboligase [General function prediction only]	Back alignment and domain information

>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes	Back alignment and domain information

>COG2609 AceE Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]	Back alignment and domain information

>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains	Back alignment and domain information

>KOG1184\|consensus	Back alignment and domain information

>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX	Back alignment and domain information

>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit	Back alignment and domain information

>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins	Back alignment and domain information

>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric	Back alignment and domain information

>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>TIGR03710 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha subunit	Back alignment and domain information

>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated	Back alignment and domain information

>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes	Back alignment and domain information

>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins	Back alignment and domain information

>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins	Back alignment and domain information

>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated	Back alignment and domain information

>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated	Back alignment and domain information

>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion]	Back alignment and domain information

>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		968
2jgd_B		933	E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length =		1e-177
2jgd_A		933	E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length =		1e-177
2xt6_A		1113	Crystal Structure Of Mycobacterium Smegmatis Alpha-		1e-165
2xta_A		868	Crystal Structure Of The Suca Domain Of Mycobacteri		1e-165

>pdb|2JGD|B Chain B, E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 933

Back alignment and structure

Iteration: 1

Score = 619 bits (1595), Expect = e-177, Method: Compositional matrix adjust. Identities = 375/929 (40%), Positives = 510/929 (54%), Gaps = 114/929 (12%) Query: 47 FLNGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSAGALPEDPKSVHASWDAFFRSSSA 106 +L+GA+ +++E++Y + DP SV A+W + F+ + P H+ +FR Sbjct: 14 YLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGV--KPDQFHSQTREYFRR--- 68 Query: 107 GALPGQAYQPPPTLAPPSGNQVPISSLAPFVGGASSHFNEPLSEKIIDDHLAVQALIRSY 166 L A + T++ P N + L LI +Y Sbjct: 69 --LAKDASRYSSTISDPDTNVKQVKVLQ---------------------------LINAY 99 Query: 167 QIRGHHIAQLDPLGI----QAADLDDKHPQELIFHNFWPSSISYAQQLQHKVADMMQKET 222 + RGH A LDPLG+ + ADLD FH+ E Sbjct: 100 RFRGHQHANLDPLGLWQQDKVADLDPS------FHDL--------------------TEA 133 Query: 223 DMEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLET 282 D ++ F + S F GKE + L E+++ L+ TYC IGAE+M I S E+ WI+Q++E+ Sbjct: 134 DFQETFNVGS--FASGKE-TMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIES 190 Query: 283 PGIMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTEL 342 SE++KR L+ LT A G E +L K+ KRF LEG + LIP +K++I + Sbjct: 191 GRATFNSEEKKRF-LSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNS 249 Query: 343 GVESVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRV 402 G VV+GM HRGRLNVL NV K + +F +FA G+GDVKYH+G + + Sbjct: 250 GTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDF--QT 307 Query: 403 TNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVF 462 + LA+ NPSHLE V PVV G RA + KV+ I +HGDAA GQGVV Sbjct: 308 DGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQ 367 Query: 463 ETFHLSDLPDYTTHGTIHIVVNNQIGFTT-DPRFSRSSSYCTDVARVVNAPIFHVNSDDP 521 ET ++S Y GT+ IV+NNQ+GFTT +P +RS+ YCTD+ ++V APIFHVN+DDP Sbjct: 368 ETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDP 427 Query: 522 EAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKY 581 EAV V LA ++RNTF +DV ID+V YRR+GHNE DEP TQPLMY+ IKK P Y Sbjct: 428 EAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIY 487 Query: 582 ANKLIEEKVVTEEQVKDVKEKYDKI-----CEEAYVNARKETHIKYKDWLDSPWSGFFEG 636 A+KL +EKV T E ++ Y C A + +L+ W + Sbjct: 488 ADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPN 547 Query: 637 KDPLKVSTTGINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVES-RTVDWAL 695 K +K L + KR S+ P A E + + +I R M + DW Sbjct: 548 KVEMK---------RLQELAKRISTVP-EAVE--MQSRVAKIYADRQAMAAGEKLFDWGG 595 Query: 696 GEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTV 755 E +A+ +L+ EGI VRLSG+D RGTF HRH V+H+Q+ + +TY PL +++ Q + V Sbjct: 596 AENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQS-NGSTYTPLQHIHNGQGAFRV 654 Query: 756 CNSSLSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGL 815 +S LSE VL FE G++ P TL WEAQFGDF N AQ +IDQFISSG+ KW R GL Sbjct: 655 WDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGL 714 Query: 816 VMLLPHGLEGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTT 875 VMLLPHG EG GPEHSSARLER+LQ+ ++ ++V VP +T Sbjct: 715 VMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVC---VP------------------ST 753 Query: 876 PANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERK 935 PA ++H+LRRQ R+PLV+M+PKSLLRHP A SS +++ GT FL I + I E Sbjct: 754 PAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT-FLPAIGE--IDELD 810 Query: 936 ADSVEKLVFCSGKVYYDLIKARNDNNLGD 964 V+++V CSGKVYYDL++ R NN D Sbjct: 811 PKGVKRVVMCSGKVYYDLLEQRRKNNQHD 839

PyMOL of 2jgd

>pdb|2JGD|A Chain A, E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 933

Back alignment and structure

>pdb|2XT6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase Homodimer (Orthorhombic Form) Length = 1113

Back alignment and structure

>pdb|2XTA|A Chain A, Crystal Structure Of The Suca Domain Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase In Complex With Acetyl-Coa (Triclinic Form) Length = 868

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		968
2jgd_A		933	2-oxoglutarate dehydrogenase E1 component; flavopr	0.0
2xt6_A		1113	2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET	0.0
2yic_A		868	2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9	0.0
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
2ozl_A		365	PDHE1-A type I, pyruvate dehydrogenase E1 componen	5e-11

>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Length = 933	Back alignment and structure

 Score = 1346 bits (3487), Expect = 0.0
 Identities = 354/921 (38%), Positives = 489/921 (53%), Gaps = 98/921 (10%)

Query: 47  FLNGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSAGALPEDPKSVHASWDAFFRSSSA 106
           +L+GA+ +++E++Y  +  DP SV A+W + F+      +  D                 
Sbjct: 14  YLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPD----------------- 56

Query: 107 GALPGQAYQPPPTLAPPSGNQVPISSLAPFVGGASSHFNEPLSEKIIDDHLAVQALIRSY 166
                Q +                 S            +           + V  LI +Y
Sbjct: 57  -----QFHSQTREYFRRLAKDASRYS------------STISDPDTNVKQVKVLQLINAY 99

Query: 167 QIRGHHIAQLDPLGIQAADLDDKHPQ-ELIFHNFWPSSISYAQQLQHKVADMMQKETDME 225
           + RGH  A LDPLG+   D   K    +  FH+                      E D +
Sbjct: 100 RFRGHQHANLDPLGLWQQD---KVADLDPSFHDL--------------------TEADFQ 136

Query: 226 KVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLETPGI 285
           + F     +F  GKE    L E+++ L+ TYC  IGAE+M I S E+  WI+Q++E+   
Sbjct: 137 ETF--NVGSFASGKETM-KLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRA 193

Query: 286 MNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGVE 345
              + ++K+  L+ LT A G E +L  K+   KRF LEG + LIP +K++I  +   G  
Sbjct: 194 -TFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTR 252

Query: 346 SVVMGMPHRGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNK 405
            VV+GM HRGRLNVL NV  K  + +F +FA       G+GDVKYH+G   +   +    
Sbjct: 253 EVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDF--QTDGG 310

Query: 406 NIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETF 465
            + LA+  NPSHLE V PVV G  RA      +    KV+ I +HGDAA  GQGVV ET 
Sbjct: 311 LVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETL 370

Query: 466 HLSDLPDYTTHGTIHIVVNNQIGFTT-DPRFSRSSSYCTDVARVVNAPIFHVNSDDPEAV 524
           ++S    Y   GT+ IV+NNQ+GFTT +P  +RS+ YCTD+ ++V APIFHVN+DDPEAV
Sbjct: 371 NMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAV 430

Query: 525 IHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYANK 584
             V  LA ++RNTF +DV ID+V YRR+GHNE DEP  TQPLMY+ IKK P     YA+K
Sbjct: 431 AFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADK 490

Query: 585 LIEEKVVTEEQVKDVKEKYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPLKVST 644
           L +EKV T E   ++   Y    +       +    +  +     WS +    +  +   
Sbjct: 491 LEQEKVATLEDATEMVNLYRDALDAGDCVVAE---WRPMNMHSFTWSPYL-NHEWDEEYP 546

Query: 645 TGINENTLVHIGKRFSSPPPNATEFVIHKGIERILKARLQMVES-RTVDWALGEAMAFGS 703
             +    L  + KR S+ P       +   + +I   R  M    +  DW   E +A+ +
Sbjct: 547 NKVEMKRLQELAKRISTVPEA---VEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYAT 603

Query: 704 LLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSSLSEF 763
           L+ EGI VRLSG+D  RGTF HRH V+H+Q+ + +TY PL +++  Q  + V +S LSE 
Sbjct: 604 LVDEGIPVRLSGEDSGRGTFFHRHAVIHNQS-NGSTYTPLQHIHNGQGAFRVWDSVLSEE 662

Query: 764 GVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGL 823
            VL FE G++   P TL  WEAQFGDF N AQ +IDQFISSG+ KW R  GLVMLLPHG 
Sbjct: 663 AVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGY 722

Query: 824 EGMGPEHSSARLERFLQMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHIL 883
           EG GPEHSSARLER+LQ+  ++                     N  +   +TPA ++H+L
Sbjct: 723 EGQGPEHSSARLERYLQLCAEQ---------------------NMQVCVPSTPAQVYHML 761

Query: 884 RRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLV 943
           RRQ     R+PLV+M+PKSLLRHP A SS +++  GT FL  I +    E     V+++V
Sbjct: 762 RRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT-FLPAIGEI--DELDPKGVKRVV 818

Query: 944 FCSGKVYYDLIKARNDNNLGD 964
            CSGKVYYDL++ R  NN  D
Sbjct: 819 MCSGKVYYDLLEQRRKNNQHD 839

PyMOL of 2jgd

>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Length = 1113	Back alignment and structure

>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Length = 868	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Length = 365	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		968
2jgd_A		933	2-oxoglutarate dehydrogenase E1 component; flavopr	100.0
2yic_A		868	2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9	100.0
2xt6_A		1113	2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET	100.0
1qs0_A		407	2-oxoisovalerate dehydrogenase alpha-subunit; hete	100.0
2bfd_A		400	2-oxoisovalerate dehydrogenase alpha subunit; oxid	100.0
2ozl_A		365	PDHE1-A type I, pyruvate dehydrogenase E1 componen	100.0
1w85_A		368	Pyruvate dehydrogenase E1 component, alpha subunit	100.0
1umd_A		367	E1-alpha, 2-OXO acid dehydrogenase alpha subunit;	100.0
2o1s_A		621	1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia	100.0
3mos_A		616	Transketolase, TK; thiamin diphosphate TPP THDP en	100.0
1gpu_A		680	Transketolase; transferase(ketone residues); HET:	100.0
2o1x_A		629	1-deoxy-D-xylulose-5-phosphate synthase; thiamin,	100.0
2e6k_A		651	Transketolase; structural genomics, NPPSFA, nation	100.0
3rim_A		700	Transketolase, TK; TPP, transferase; HET: TPP; 2.4	100.0
1r9j_A		673	Transketolase; domains, EACH of the alpha/beta typ	100.0
1itz_A		675	Transketolase; calvin cycle, cofactor, thiamine py	100.0
2r8o_A		669	Transketolase 1, TK 1; reaction intermediate, calc	100.0
3kom_A		663	Transketolase; rossmann fold, csgid, transferase,	100.0
3m49_A		690	Transketolase; alpha-beta-alpha sandwich, csgid, t	99.98
3l84_A		632	Transketolase; TKT, structural genomics, center fo	99.98
3uk1_A		711	Transketolase; structural genomics, seattle struct	99.97
2ozl_B		341	PDHE1-B, pyruvate dehydrogenase E1 component subun	99.95
1qs0_B		338	2-oxoisovalerate dehydrogenase beta-subunit; heter	99.95
1ik6_A		369	Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, o	99.94
2bfd_B		342	2-oxoisovalerate dehydrogenase beta subunit; oxido	99.94
1umd_B		324	E1-beta, 2-OXO acid dehydrogenase beta subunit; al	99.94
2qtc_A		886	Pyruvate dehydrogenase E1 component; thiamin dipho	99.93
1w85_B		324	Pyruvate dehydrogenase E1 component, beta subunit;	99.92
4feg_A		603	Pyruvate oxidase; carbanion, structure activity re	99.56
3ahc_A		845	Phosphoketolase, xylulose 5-phosphate/fructose 6-p	99.45
1v5e_A		590	Pyruvate oxidase; oxidoreductase, flavoprotein; HE	98.85
2pan_A		616	Glyoxylate carboligase; thiamin-diphosphate (THDP)	98.81
1q6z_A		528	BFD, BFDC, benzoylformate decarboxylase; lyase, ca	98.78
2vk8_A		563	Pyruvate decarboxylase isozyme 1; asymmetric activ	98.71
1ozh_A		566	ALS, acetolactate synthase, catabolic; acetohydrox	98.68
2iht_A		573	Carboxyethylarginine synthase; thiamin diphosphate	98.67
1t9b_A		677	Acetolactate synthase, mitochondrial; acetohydroxy	98.64
1ovm_A		552	Indole-3-pyruvate decarboxylase; thiamine diphosph	98.63
2uz1_A		563	Benzaldehyde lyase; thiamine diphosphate, thiamine	98.62
2nxw_A		565	Phenyl-3-pyruvate decarboxylase; thiamine pyrophos	98.61
2vbi_A		566	Pyruvate decarboxylase; thiamine pyrophosphate, ly	98.6
2pgn_A		589	Cyclohexane-1,2-dione hydrolase (CDH); three alpha	98.58
2vbf_A		570	Branched-chain alpha-ketoacid decarboxylase; KDCA,	98.57
1ybh_A		590	Acetolactate synthase, chloroplast; acetohydroxyac	98.56
2wvg_A		568	PDC, pyruvate decarboxylase; thiamine diphosphate,	98.54
3eya_A		549	Pyruvate dehydrogenase [cytochrome]; pyruvate oxid	98.49
3hww_A		556	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-	98.48
2q28_A		564	Oxalyl-COA decarboxylase; lyase, oxalate degradati	98.47
1yd7_A		395	2-keto acid:ferredoxin oxidoreductase subunit alph	98.46
2c31_A		568	Oxalyl-COA decarboxylase; oxalate, thiamin diphosp	98.43
2x7j_A		604	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -	98.41
3lq1_A		578	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-	98.3
2c42_A		1231	Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron,	97.81
2c42_A		1231	Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron,	96.55

>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*	Back alignment and structure

Probab=100.00  E-value=3.3e-177  Score=1620.74  Aligned_cols=828  Identities=42%  Similarity=0.709  Sum_probs=658.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhcCCCcchHhHHHHHhccCC-CCCCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCCCCC
Q psy8742          44 AEPFLNGASANYVEEMYRSWQEDPKSVHASWDAFFRSSSA-GALPEDPKSVHASWDAFFRSSSAGALPGQAYQPPPTLAP  122 (968)
Q Consensus        44 ~~s~l~g~Na~YIEelY~~yl~DP~SVd~sW~~~F~~l~~-~~~~~~~~~~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~  122 (968)
                      ++|||+|+|+.|||+||++|++||+|||+||+.||+.+.. +. +  .+..|.+...+|..+.....             
T Consensus        11 ~~~~~~~~~~~~~~~~y~~~~~~p~sv~~~w~~~f~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~-------------   74 (933)
T 2jgd_A           11 DSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGV-K--PDQFHSQTREYFRRLAKDAS-------------   74 (933)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhcccccccHHHHHHHHHHHhhCccccCHHHHHHHhcccccCC-c--ccccccchhhhhhhcccccc-------------
Confidence            4589999999999999999999999999999998887643 11 0  01122222222211100000             


Q ss_pred             CCCCCCCCCCCCCcccCCCCCCCCchhHHHHhHHHHHHHHHHHHHHccccccccCCCCCCccCCCCCCCcccccccCCCC
Q psy8742         123 PSGNQVPISSLAPFVGGASSHFNEPLSEKIIDDHLAVQALIRSYQIRGHHIAQLDPLGIQAADLDDKHPQELIFHNFWPS  202 (968)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~li~ayr~~GH~~A~ldPL~~~~~~~~~~~~~~l~~~~~~~~  202 (968)
                         +       ...  .       ........++++|++||+|||.+||+.|+||||++..+    ..+++|        
T Consensus        75 ---~-------~~~--~-------~~~~~~~~~~~~~~~li~~yr~~gh~~a~~dpl~~~~~----~~~~~l--------  123 (933)
T 2jgd_A           75 ---R-------YSS--T-------ISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQ----DKVADL--------  123 (933)
T ss_dssp             ----------------------------CHHHHHHHHHHHHHHHHHHGGGGSCCCSSSCCCC----C---CC--------
T ss_pred             ---c-------ccc--c-------cCcchhHHHHHHHHHHHHHHHHhCccccccCCCCCCCC----CCCCCC--------
Confidence               0       000  0       00001235788999999999999999999999998532    356889        


Q ss_pred             ChhHHHHhhhhhccCCCCcccccceeccCCcccccCCCCCCCHHHHHHHHHHHccCcccccccccCCHHHHHHHHHHhcC
Q psy8742         203 SISYAQQLQHKVADMMQKETDMEKVFKLPSTTFIGGKEKALPLREIIKRLEDTYCRSIGAEFMFINSLEQCNWIRQKLET  282 (968)
Q Consensus       203 ~~~~~~~~~~~~~~~gl~~~Dl~~~~~~~~~~~~~~~~~~~~l~~i~~~L~~~Ycg~ig~E~~hi~~~e~r~Wl~~~~E~  282 (968)
                      ++++|          ||+++|||+.|.++.  +.. +...+||+||+++|+++|||+||+|||||.|+++|.||+++||+
T Consensus       124 ~~~~~----------g~~~~d~~~~~~~~~--~~~-~~~~~~l~~~~~~l~~~yc~~ig~e~~~i~~~~~~~w~~~~~e~  190 (933)
T 2jgd_A          124 DPSFH----------DLTEADFQETFNVGS--FAS-GKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIES  190 (933)
T ss_dssp             SSGGG----------GCCC-CTTSEEECTT--CC----CEEEHHHHHHHHHHHHHSSEEEECSSCCCHHHHHHHHHHHCC
T ss_pred             CHhHc----------CCchhhccceeccCc--ccc-CcCcCcHHHHHHHHHHhccCCCcceeeecCCHHHhHHHHHHhhc
Confidence            99999          999999999998753  321 34568999999999999999999999999999999999999997


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCcchhhHHHHHHHHHHhhhcCCCcEEeccCCccHHHHHHH
Q psy8742         283 PGIMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRFGLEGAEILIPAMKQVIDKSTELGVESVVMGMPHRGRLNVLAN  362 (968)
Q Consensus       283 ~~~~~ls~e~~~~il~~M~~aR~fE~~l~~~~~~~Krfg~eG~Ea~i~~l~~li~~a~~~g~~divigm~HRgr~~~La~  362 (968)
                      . .+.+++|+++++|++|+++|.||+++.++|+++||||++|+|++++|+.++++.|.++|++|+++||+||||+|+|+|
T Consensus       191 ~-~~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~gkrf~~~G~Ea~i~g~~~~~~~a~~~g~~D~v~g~~hRg~~~~Lan  269 (933)
T 2jgd_A          191 G-RATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVN  269 (933)
T ss_dssp             --CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCTTCTTHHHHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHH
T ss_pred             c-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCchHHHHHHHHHHHHHhhCCCCCEEecCCCcCHHHHHHH
Confidence            6 678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCHHHHHHHh-cCCCCCCCCCCCcccccccccccccccCCcceeeeeecCCCCccccCchhhhHhhHhHhhcCCCCC
Q psy8742         363 VCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDGEG  441 (968)
Q Consensus       363 g~gkp~~~ifae~-g~~~~~~~G~GdV~~Hlg~~~~~~~~~~g~~i~~~i~~NpShLea~~PvA~G~A~A~q~~~~~~~~  441 (968)
                      ++|+|+.+||+|| |+.++.+ |.|||+||+|++..++.  .|+.+++++++||||||+++|+|+|+|+|.|++.++.++
T Consensus       270 ~~G~~~~~i~~e~~G~~~g~~-g~gdv~~Hlg~~~~~~~--~gg~~~l~l~~~~shlg~~~p~A~G~A~A~~~~~~~~~~  346 (933)
T 2jgd_A          270 VLGKKPQDLFDEFAGKHKEHL-GTGDVKYHMGFSSDFQT--DGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSS  346 (933)
T ss_dssp             TTCCCHHHHHHHHHTCC--CC-SCCCCGGGCCEEEEEEE--TTEEEEEEECCCCSSTTCHHHHHHHHHHHHHTTSSSCCG
T ss_pred             HhCCCHHHHHHHhcCCCCCCC-CCCCccccCCccccccc--CCCceEEeecccCcccccccCHHHHHHHHHHhhccccCC
Confidence            9999999999999 7765554 67899999999887653  577899999999999999999999999999985433345


Q ss_pred             ceEEEEEEeCCccccCcchHHHHHHhCCCCCCCcccEEEEEEcCCccccc-CCCcccccccHhHhhhhcCCcEEEEeCCC
Q psy8742         442 KKVMSILLHGDAAFCGQGVVFETFHLSDLPDYTTHGTIHIVVNNQIGFTT-DPRFSRSSSYCTDVARVVNAPIFHVNSDD  520 (968)
Q Consensus       442 ~~~v~v~~hGDgAfsgQGvv~EaLNlA~LP~y~~gGvIfVVeNNqig~TT-~~~~~rss~~~td~Ak~~giP~~hVDGnD  520 (968)
                      .+.++||+||||||++||+||||||+|.+.+|.|||+||||+|||||||| ++.+++++.|++++|++||+|++||||||
T Consensus       347 ~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~~~~~~~~a~a~g~p~~~VdG~D  426 (933)
T 2jgd_A          347 NKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADD  426 (933)
T ss_dssp             GGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC---------------CGGGGGGTTTCCEEEEETTC
T ss_pred             CCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCCCHHhcccchhHHHHHHHcCCCEEEECCCC
Confidence            78999999999997699999999999999999999999999999999999 99989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEEEEeecCCCCCCCCCCCCCCHHHHHHHHhCCCHHHHHHHHHHHccCCCHHHHHHHH
Q psy8742         521 PEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYANKLIEEKVVTEEQVKDVK  600 (968)
Q Consensus       521 ~eAV~~a~~~Ave~rr~~~gPvlIel~tYR~~GHne~Ddp~yt~p~~y~~i~~~~dpi~~y~~~Li~~Gv~t~ee~~~i~  600 (968)
                      ++||++|+++|++|+|++++|+|||++|||++|||++|+|.||+|+||+.|++++||+.+|+++|+++|++|++++++++
T Consensus       427 ~~av~~a~~~A~e~~r~~~~P~lIe~~tyR~~GH~~~D~~~yr~~~e~~~~~~~~dPi~~~~~~Li~~Gv~t~~~~~~i~  506 (933)
T 2jgd_A          427 PEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMV  506 (933)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC-----------CCTTHHHHHTSCCHHHHHHHHHHTTTSSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEeeeeecCcCcccchhhCCHHHHHHHHccCCHHHHHHHHHHHcCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCccccCCCCCCCCCCCCCCccCCCCCCHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHH
Q psy8742         601 EKYDKICEEAYVNARKETHIKYKDWLDSPWSGFFEGKDPLKVSTTGINENTLVHIGKRFSSPPPNATEFVIHKGIERILK  680 (968)
Q Consensus       601 ~e~~~~l~~a~~~A~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~tgv~~~~l~~i~~~~~~~P~~~~~f~~h~~l~~~l~  680 (968)
                      ++++++|+++++.|++.. |.+.++  ..|.++..... .....||++.+.|+.+++++..+|   ++|.+|++|.++++
T Consensus       507 ~~~~~~v~~a~~~A~~~~-p~~~~~--~~~~~~~~~~~-~~~~~tg~~~~~l~~i~~~~~~~p---~~~~~~~~v~~~~~  579 (933)
T 2jgd_A          507 NLYRDALDAGDCVVAEWR-PMNMHS--FTWSPYLNHEW-DEEYPNKVEMKRLQELAKRISTVP---EAVEMQSRVAKIYG  579 (933)
T ss_dssp             HHHHHHHHHTSCCCTTEE-CCCGGG--CTTGGGSSCCT-TCCCCCCCCHHHHHHHHHHTTCCC---TTSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcC-CCCcch--hhccccccccc-ccCCCCCCCHHHHHHHHhhhcCCC---CCCcccHHHHHHHH
Confidence            999999999999987742 222222  35766543211 123579999999999999999999   99999999999999


Q ss_pred             HHHHhhhhh-chhhhhhhHhhhhhhhhcCCcEEEeccccCCCccccccceeeeeccCCceeecCCCCCCCCCCcEeecCC
Q psy8742         681 ARLQMVESR-TVDWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQTVDKATYRPLNNLYPDQAPYTVCNSS  759 (968)
Q Consensus       681 ~r~~~~~~~-~idwa~aE~LA~~sLl~eg~~Vrl~GqDv~rGtFshRHav~~dq~~~~~~~~~~~~l~~~~g~~~v~nsp  759 (968)
                      .|.+|++++ .+||+++|++||++|+.+|.+||++||||++|||||||||||||+|+ ++|.+|++|.++||++||+|||
T Consensus       580 ~R~~~~~~~~~~dw~~~e~~al~~l~~~~~~V~~~g~Dv~~gTfs~rh~v~~d~~~g-~~~~~l~~l~~~~gp~rv~ds~  658 (933)
T 2jgd_A          580 DRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNG-STYTPLQHIHNGQGAFRVWDSV  658 (933)
T ss_dssp             HHHHHHTTSSCBCHHHHHHHHHHHHHTTTCCEEEEETTTTTCTTSCCCCSEECSSSS-CEECGGGCSCTTCCCEEEECCC
T ss_pred             HHHHhhhccCCCCHHHHHHHHHHHHHhcCCCEEEECCccCCcchhhhhhhcccccCC-ceeechHHHHHHcCCCeEEECC
Confidence            999998765 59999999999999999999999999999999999999999999986 5999999999999999999999


Q ss_pred             cchHHHHHHhhhcccCCCCccccccchhhhhHhhhhHHHHHHHhhhccccccccCcEEEcCccCCCCCcccCCChHHHHh
Q psy8742         760 LSEFGVLGFELGFSMTNPNTLVCWEAQFGDFNNTAQCIIDQFISSGQAKWVRQSGLVMLLPHGLEGMGPEHSSARLERFL  839 (968)
Q Consensus       760 LsE~avlG~~~G~s~~g~~~l~iWE~qfgDF~~~aQvi~Dq~i~~~~~kw~~~~~lv~~lP~G~~g~GpeHSs~r~er~l  839 (968)
                      |||++++||++|||+.|+++|+|||+|||||+|+||+++|||+++++.||++++||||++||||+|+||+|||+|+|+||
T Consensus       659 IaE~~~vg~a~G~A~~G~~~lpv~e~qf~dF~~~AQra~DQii~~~~ak~~~~~~vv~~l~~G~~g~G~~Hss~~~E~~l  738 (933)
T 2jgd_A          659 LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYL  738 (933)
T ss_dssp             SCHHHHHHHHHHHHHHCTTSEEEEEC-CGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSCTTSSCCCHHHHH
T ss_pred             cCHHHHHHHHHHHHhcCCCCCCEEEEEEhhhhcccHHHHHHHHHHHHHHHccCCCEEEEEeCCCCCCCcccccchHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCcccccccchhhhhhhcccCCCeEEEecCCHhHHHHHHHHHHhcCCCCcEEEEecccCcCCCCCCCCcccccCC
Q psy8742         840 QMSDDEPIRVILVLVPIEFAVRQLHDINWIIANCTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEG  919 (968)
Q Consensus       840 ql~~~~~~~~p~~~~~~~~~~~~~~~~n~~V~~pstpa~~~hlLr~q~~~~~r~Pli~~~pK~Llr~~~a~s~l~e~~~g  919 (968)
                      |+|+.     |                ||+|++||||+|||||||+|+.+++++||||++||+|||++.++|+++++.++
T Consensus       739 ~~~~~-----p----------------nm~V~~Pst~~e~~~lLr~a~~~~~~~Pvii~~pk~l~r~~~~~~~~~~~~~~  797 (933)
T 2jgd_A          739 QLCAE-----Q----------------NMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANG  797 (933)
T ss_dssp             HTCCT-----T----------------CCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTCCBCHHHHHHC
T ss_pred             HHhCC-----C----------------CeEEEecCCHHHHHHHHHHHHHhcCCCcEEEEecchhccCCCCcCCccccCCC
Confidence            99976     4                99999999999999999999877788999999999999999999988888655


Q ss_pred             CceEEeccCCCccccCCCCccEEEEecchhHHHHHHHHHhcCCCCCccC
Q psy8742         920 TEFLRVIPDDSISERKADSVEKLVFCSGKVYYDLIKARNDNNLGDKIAV  968 (968)
Q Consensus       920 ~~F~~vi~d~~~~~~~~~~v~rvilcsGkvyydl~~~r~~~~~~~~vai  968 (968)
                       .|+.+|++...  ..+++|+|||+|+|++||+|.++|++.+.+ +|+|
T Consensus       798 -~f~~~ig~~~~--~~g~dV~~vI~~~G~v~~~l~aa~~~l~~~-~v~V  842 (933)
T 2jgd_A          798 -TFLPAIGEIDE--LDPKGVKRVVMCSGKVYYDLLEQRRKNNQH-DVAI  842 (933)
T ss_dssp             -CCCSEECCCSC--CCGGGCCEEEEECTTHHHHHHHHHHHTTCC-SEEE
T ss_pred             -ceeecCCcceE--eecCcceEEEEEchHHHHHHHHHHHHcccC-CeEE
Confidence             49988987642  236789999999999999999999887653 6654

PyMOL of 2jgd

>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*	Back alignment and structure

>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}	Back alignment and structure

>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A	Back alignment and structure

>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...	Back alignment and structure

>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*	Back alignment and structure

>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*	Back alignment and structure

>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*	Back alignment and structure

>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}	Back alignment and structure

>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*	Back alignment and structure

>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*	Back alignment and structure

>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}	Back alignment and structure

>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}	Back alignment and structure

>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}	Back alignment and structure

>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1	Back alignment and structure

>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1	Back alignment and structure

>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*	Back alignment and structure

>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}	Back alignment and structure

>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*	Back alignment and structure

>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*	Back alignment and structure

>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*	Back alignment and structure

>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B	Back alignment and structure

>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B	Back alignment and structure

>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2	Back alignment and structure

>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...	Back alignment and structure

>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*	Back alignment and structure

>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*	Back alignment and structure

>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*	Back alignment and structure

>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*	Back alignment and structure

>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*	Back alignment and structure

>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*	Back alignment and structure

>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}	Back alignment and structure

>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*	Back alignment and structure

>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*	Back alignment and structure

>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*	Back alignment and structure

>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*	Back alignment and structure

>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*	Back alignment and structure

>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9	Back alignment and structure

>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*	Back alignment and structure

>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*	Back alignment and structure

>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}	Back alignment and structure

>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*	Back alignment and structure

>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*	Back alignment and structure

>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*	Back alignment and structure

>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*	Back alignment and structure

>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*	Back alignment and structure

>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*	Back alignment and structure

>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*	Back alignment and structure

>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}	Back alignment and structure

>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*	Back alignment and structure

>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}	Back alignment and structure

>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}	Back alignment and structure

>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*	Back alignment and structure

>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		968
d1umda_		362	c.36.1.11 (A:) Branched-chain alpha-keto acid dehy	1e-17
d2ozla1		361	c.36.1.11 (A:1-361) E1-beta subunit of pyruvate de	2e-14
d1w85a_		365	c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, Pd	3e-14
d2bfda1		395	c.36.1.11 (A:6-400) Branched-chain alpha-keto acid	8e-13
d1qs0a_		407	c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B	1e-11

>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Length = 362	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Branched-chain alpha-keto acid dehydrogenase PP module
domain: Branched-chain alpha-keto acid dehydrogenase, PP module
species: Thermus thermophilus [TaxId: 274]

 Score = 83.4 bits (205), Expect = 1e-17
 Identities = 31/195 (15%), Positives = 59/195 (30%), Gaps = 3/195 (1%)

Query: 423 PVVQGKTRAEQFYRGDGEGKKVMSILLHGDAAFCGQGVVFETFHLSDLPDYTTHGTIHIV 482
           P+      A          +     +         +G  +   + + +          I 
Sbjct: 140 PIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAV---FIA 196

Query: 483 VNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHVNSDDPEAVIHVCNLAAEWRNTFHKDV 542
            NN    + D R    S    D A     P + V+  D  A  +V   A E         
Sbjct: 197 ENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPS 256

Query: 543 VIDIVSYRRNGHNEIDEPMFTQPLMYKIIKKTPPALDKYANKLIEEKVVTEEQVKDVKEK 602
           ++++  YR   H+  D+    +P       +    + ++   L    +  EE  +DV+E+
Sbjct: 257 LVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREE 316

Query: 603 YDKICEEAYVNARKE 617
                E     A + 
Sbjct: 317 IRAELERGLKEAEEA 331

PyMOL of d1umda_

>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} Length = 361	Back information, alignment and structure

>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} Length = 365	Back information, alignment and structure

>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Length = 395	Back information, alignment and structure

>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Length = 407	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		968
d1umda_		362	Branched-chain alpha-keto acid dehydrogenase, PP m	100.0
d2bfda1		395	Branched-chain alpha-keto acid dehydrogenase, PP m	100.0
d1qs0a_		407	2-oxoisovalerate dehydrogenase (E1B), PP module {P	100.0
d2ozla1		361	E1-beta subunit of pyruvate dehydrogenase (PP modu	100.0
d1w85a_		365	Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st	100.0
d1w85b1		192	Pyruvate dehydrogenase E1-beta, PdhB, N-terminal d	100.0
d2bfdb1		203	Branched-chain alpha-keto acid dehydrogenase, Pyr	100.0
d2ozlb1		192	E1-beta subunit of pyruvate dehydrogenase, Pyr mod	99.97
d1ik6a1		191	E1-beta subunit of pyruvate dehydrogenase, Pyr mod	99.97
d1qs0b1		204	2-oxoisovalerate dehydrogenase (E1B), Pyr module {	99.97
d1umdb1		186	Branched-chain alpha-keto acid dehydrogenase, Pyr	99.92
d1r9ja2		336	Transketolase (TK), PP module {Leishmania mexicana	99.26
d2r8oa2		331	Transketolase (TK), PP module {Escherichia coli [T	99.25
d1gpua1		335	Transketolase (TK), PP module {Baker's yeast (Sacc	99.11
d2djia3		229	Pyruvate oxidase {Aerococcus viridans [TaxId: 1377	99.04
d1itza1		338	Transketolase (TK), PP module {Maize (Zea mays) [T	98.96
d1q6za3		183	Benzoylformate decarboxylase {Pseudomonas putida [	98.74
d2ihta3		198	Carboxyethylarginine synthase {Streptomyces clavul	98.68
d2ez9a3		228	Pyruvate oxidase {Lactobacillus plantarum [TaxId:	98.66
d1ybha3		208	Acetohydroxyacid synthase catalytic subunit {Thale	98.6
d2ieaa2		415	Pyruvate dehydrogenase E1 component, PP module {Es	98.48
d1ovma3		196	Indole-3-pyruvate decarboxylase {Enterobacter cloa	98.45
d1ozha3		192	Catabolic acetolactate synthase {Klebsiella pneumo	98.42
d1zpda3		204	Pyruvate decarboxylase {Zymomonas mobilis [TaxId:	98.4
d1t9ba3		227	Acetohydroxyacid synthase catalytic subunit {Baker	98.38
d2ji7a3		183	Oxalyl-CoA decarboxylase {Oxalobacter formigenes [	98.37
d1pvda3		196	Pyruvate decarboxylase {Baker's yeast (Saccharomyc	98.21
d1gpua2		197	Transketolase (TK), Pyr module {Baker's yeast (Sac	97.44
d1itza2		192	Transketolase (TK), Pyr module {Maize (Zea mays) [	97.22
d1r9ja1		190	Transketolase (TK), Pyr module {Leishmania mexican	96.77
d2r8oa1		195	Transketolase (TK), Pyr module {Escherichia coli [	96.71
d2c42a2		447	Pyruvate-ferredoxin oxidoreductase, PFOR, domains	96.25
d2c42a1		257	Pyruvate-ferredoxin oxidoreductase, PFOR, domain I	90.61
d2djia2		184	Pyruvate oxidase {Aerococcus viridans [TaxId: 1377	82.11
d1zpda2		186	Pyruvate decarboxylase {Zymomonas mobilis [TaxId:	80.41

>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Branched-chain alpha-keto acid dehydrogenase PP module
domain: Branched-chain alpha-keto acid dehydrogenase, PP module
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-63  Score=557.94  Aligned_cols=310  Identities=17%  Similarity=0.180  Sum_probs=285.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc---ccCcchhhHHHHHHHHHHhhhcCCC-cEEeccCCccHHHHH
Q psy8742         285 IMNMSEDQKRLILARLTRATGFEAFLARKWSSEKRF---GLEGAEILIPAMKQVIDKSTELGVE-SVVMGMPHRGRLNVL  360 (968)
Q Consensus       285 ~~~ls~e~~~~il~~M~~aR~fE~~l~~~~~~~Krf---g~eG~Ea~i~~l~~li~~a~~~g~~-divigm~HRgr~~~L  360 (968)
                      .+.||+|+++++|+.|+++|.||+++..+|++||++   ...|||++.+|+      +.++..+ |++++ +||+|+++|
T Consensus        25 ~~~ls~e~l~~~yr~M~~~R~~ee~~~~l~~~g~~~~~~~~~GqEA~~vg~------~~al~~~~D~~~~-~yR~h~~~l   97 (362)
T d1umda_          25 PLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAI------AHAIRPGFDWVFP-YYRDHGLAL   97 (362)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHH------HHHSCTTTSEEEC-CTTTHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcceeeCCCCHHHHHHHH------HHHcCCCCCeEEe-ccccHHHHH
Confidence            478999999999999999999999999999999974   349999998864      3456664 77774 899999999


Q ss_pred             HHhcCCCHHHHHHHh-cCCCCCCCCCCCcccccccccccccccCCcceeeeeecCCCCccccCchhhhHhhHhHhhcCCC
Q psy8742         361 ANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDG  439 (968)
Q Consensus       361 a~g~gkp~~~ifae~-g~~~~~~~G~GdV~~Hlg~~~~~~~~~~g~~i~~~i~~NpShLea~~PvA~G~A~A~q~~~~~~  439 (968)
                      ++|+  ++.++|+|+ |+.++.++|+|+ +||+++...++            .+..++||++.|+|+|.|+|.|+     
T Consensus        98 a~G~--~~~~~~ae~~gk~~g~~~Grgg-s~H~~~~~~~~------------~~~~~ivg~~~p~a~G~A~a~k~-----  157 (362)
T d1umda_          98 ALGI--PLKELLGQMLATKADPNKGRQM-PEHPGSKALNF------------FTVASPIASHVPPAAGAAISMKL-----  157 (362)
T ss_dssp             HHTC--CHHHHHHHHHTBTTCTTTTCSC-SSCCCBTTTTB------------CCCCSSTTTTHHHHHHHHHHHHH-----
T ss_pred             HHHh--hHHHHHHHHhcccCCCcccccc-cccccccccCc------------ccccccccccchHHHHHHHhhhc-----
Confidence            9977  999999999 988889999976 99999876654            34457889999999999999999     


Q ss_pred             CCceEEEEEEeCCccccCcchHHHHHHhC---CCCCCCcccEEEEEEcCCcccccCCCcccccccHhHhhhhcCCcEEEE
Q psy8742         440 EGKKVMSILLHGDAAFCGQGVVFETFHLS---DLPDYTTHGTIHIVVNNQIGFTTDPRFSRSSSYCTDVARVVNAPIFHV  516 (968)
Q Consensus       440 ~~~~~v~v~~hGDgAfsgQGvv~EaLNlA---~LP~y~~gGvIfVVeNNqig~TT~~~~~rss~~~td~Ak~~giP~~hV  516 (968)
                      .+++.|+||++|||| ++||+||||||||   +||      +||||+||+||+||+...+++..+++++|++||||+++|
T Consensus       158 ~~~~~v~v~~~GDGa-~~eG~f~Ealn~A~~~~lP------vifv~eNN~~aist~~~~~~~~~~~~~~a~~~gi~~~~v  230 (362)
T d1umda_         158 LRTGQVAVCTFGDGA-TSEGDWYAGINFAAVQGAP------AVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLV  230 (362)
T ss_dssp             TTCCCCEEEEEETGG-GGSHHHHHHHHHHHHTTCS------EEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEE
T ss_pred             ccccceeeeeccCCc-ccCCchHHHHHHhhhccCC------eeeeeeecccccccccccccccchhhhhhhhheeeeeEe
Confidence            577889999999999 7999999999999   999      999999999999999999999999999999999999999


Q ss_pred             eCCCHHHHHHHHHHHHHHhhcCCCcEEEEEEeecCCCCCCCCCCC-CCCHHHHHHHHhCCCHHHHHHHHHHHccCCCHHH
Q psy8742         517 NSDDPEAVIHVCNLAAEWRNTFHKDVVIDIVSYRRNGHNEIDEPM-FTQPLMYKIIKKTPPALDKYANKLIEEKVVTEEQ  595 (968)
Q Consensus       517 DGnD~eAV~~a~~~Ave~rr~~~gPvlIel~tYR~~GHne~Ddp~-yt~p~~y~~i~~~~dpi~~y~~~Li~~Gv~t~ee  595 (968)
                      ||||+++|+.++++|++++|+++||+|||+.|||+.||+++|++. ||++++++.|++ +||+.+|+++|+++|++|+++
T Consensus       231 DGnDv~~v~~a~~~Ai~~~R~g~gP~lIE~~tyR~~gHs~~Dd~~~YR~~~Ei~~w~~-~DPi~~~~~~L~~~g~~se~e  309 (362)
T d1umda_         231 DGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRK-KDPIPRFRRFLEARGLWNEEW  309 (362)
T ss_dssp             ETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHHT-TCHHHHHHHHHHTTTCCCHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHhcCCCEEEEcccccccCCCccccchhhcchhhhHHHhc-CCHHHHHHHHHHHCCCCCHHH
Confidence            999999999999999999999999999999999999999999885 999999999986 899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCccccCCC
Q psy8742         596 VKDVKEKYDKICEEAYVNARKETHIKYKDWLDSP  629 (968)
Q Consensus       596 ~~~i~~e~~~~l~~a~~~A~~~~~~~~~~~~~~~  629 (968)
                      +++|+++++++|++|+++|++.|.|++++.+...
T Consensus       310 ~~~i~~ei~~~V~~a~~~A~~~p~P~~~~l~~~V  343 (362)
T d1umda_         310 EEDVREEIRAELERGLKEAEEAGPVPPEWMFEDV  343 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCBCCGGGGGTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhcc
Confidence            9999999999999999999999998887766544

PyMOL of d1umda_

>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]}	Back information, alignment and structure

>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d1w85b1 c.36.1.7 (B:1-192) Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d2bfdb1 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}	Back information, alignment and structure

>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]}	Back information, alignment and structure

>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module {Leishmania mexicana mexicana [TaxId: 44270]}	Back information, alignment and structure

>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}	Back information, alignment and structure

>d1itza1 c.36.1.10 (A:10-347) Transketolase (TK), PP module {Maize (Zea mays) [TaxId: 4577]}	Back information, alignment and structure

>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}	Back information, alignment and structure

>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]}	Back information, alignment and structure

>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}	Back information, alignment and structure

>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}	Back information, alignment and structure

>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]}	Back information, alignment and structure

>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}	Back information, alignment and structure

>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]}	Back information, alignment and structure

>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}	Back information, alignment and structure

>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]}	Back information, alignment and structure

>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]}	Back information, alignment and structure

>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]}	Back information, alignment and structure

>d2c42a1 c.36.1.8 (A:2-258) Pyruvate-ferredoxin oxidoreductase, PFOR, domain I {Desulfovibrio africanus [TaxId: 873]}	Back information, alignment and structure

>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}	Back information, alignment and structure

>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]}	Back information, alignment and structure