Psyllid ID: psy8783


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70----
MQDVVTSVFNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFNITTHETATDGKELRLQKAHSEA
ccccEEEEEccEEEEEEEEEEcccEEEEEEEcccccccccHHHHHHHccccEEEEEEcccccEEEEEEcccccc
cccEEEEEEcccEEEEEEEEcccccEEEEEccccEEHHHHHHHHHHHcccEEEEEEEccccccEEEEEcccccc
MQDVVTSVfnnshfldvhfshqdqDLFYFVKELPQKIRDDLDELKRlgsmfnitthetatdgkELRLQKAHSEA
MQDVVTSVFNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFnitthetatdgkelrlqkahsea
MQDVVTSVFNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFNITTHETATDGKELRLQKAHSEA
****VTSVFNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFNIT********************
*QDVVTSVFNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFNITTH******************
MQDVVTSVFNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFNITTHETATDGKE**********
MQDVVTSVFNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFNITTHETATDGKELRLQKA****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQDVVTSVFNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFNITTHETATDGKELRLQKAHSEA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query74 2.2.26 [Sep-21-2011]
O61307 2731 Teneurin-m OS=Drosophila yes N/A 0.810 0.021 0.625 4e-16
Q9VYN8 3004 Teneurin-a OS=Drosophila no N/A 0.756 0.018 0.448 6e-05
>sp|O61307|TENM_DROME Teneurin-m OS=Drosophila melanogaster GN=Ten-m PE=1 SV=2 Back     alignment and function desciption
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 4/64 (6%)

Query: 9    FNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFNITTHETATDG----KE 64
            FNNS+FLD+HFS  DQD+FYFVK+   K+RDD +EL+RLG MFNI+THE +  G    KE
Sbjct: 2546 FNNSYFLDLHFSIHDQDVFYFVKDNVLKLRDDNEELRRLGGMFNISTHEISDHGGSAAKE 2605

Query: 65   LRLQ 68
            LRL 
Sbjct: 2606 LRLH 2609




Involved in neural development, regulating the establishment of proper connectivity within the nervous system. Acts as a homophilic and heterophilic synaptic cell adhesion molecule that drives synapse assembly. Promotes bi-directional trans-synaptic signaling with ten-a to organize neuromuscular synapses. Function in olfactory synaptic partner matching; promotes homophilic cell adhesion between pre-synaptic olfactory receptor neurons (ORN) axons and post-synaptic projection neurons (PN) dendrites partner in the developing antennal lobe to form stable connections. Also required for peripheral axon growth cone guidance and target recognition of motor neurons.
Drosophila melanogaster (taxid: 7227)
>sp|Q9VYN8|TENA_DROME Teneurin-a OS=Drosophila melanogaster GN=Ten-a PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query74
328724902 2927 PREDICTED: teneurin-3-like isoform 1 [Ac 0.959 0.024 0.666 1e-19
242003399 2599 type II transmembrane protein, putative 0.918 0.026 0.652 2e-19
328724904 2662 PREDICTED: teneurin-3-like isoform 2 [Ac 0.959 0.026 0.666 2e-19
380012905 2564 PREDICTED: teneurin-3-like [Apis florea] 0.918 0.026 0.652 4e-19
332023466 3373 Teneurin-3 [Acromyrmex echinatior] 0.918 0.020 0.666 7e-19
328785592 3404 PREDICTED: teneurin-3 isoform 1 [Apis me 0.918 0.019 0.652 1e-18
307196795 3360 Teneurin-3 [Harpegnathos saltator] 0.918 0.020 0.652 2e-18
345493429 3237 PREDICTED: teneurin-3-like [Nasonia vitr 0.918 0.021 0.666 2e-18
350404731 3457 PREDICTED: teneurin-3-like [Bombus impat 0.918 0.019 0.652 2e-18
340721624 3454 PREDICTED: teneurin-3-like [Bombus terre 0.918 0.019 0.652 2e-18
>gi|328724902|ref|XP_001945083.2| PREDICTED: teneurin-3-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/72 (66%), Positives = 57/72 (79%), Gaps = 1/72 (1%)

Query: 1    MQDVVTSVFNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFNITTHETAT 60
            +QDVV SVFN S+FLD+HF   D+DLFYFVK+   K  DD++ELKRLG MFN+TTHETA 
Sbjct: 2746 VQDVVMSVFNGSYFLDLHFEQHDKDLFYFVKDNALKQNDDMEELKRLGGMFNVTTHETA- 2804

Query: 61   DGKELRLQKAHS 72
            DGKELRL  A +
Sbjct: 2805 DGKELRLLSAEA 2816




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003399|ref|XP_002422722.1| type II transmembrane protein, putative [Pediculus humanus corporis] gi|212505544|gb|EEB09984.1| type II transmembrane protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|328724904|ref|XP_003248283.1| PREDICTED: teneurin-3-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|380012905|ref|XP_003690513.1| PREDICTED: teneurin-3-like [Apis florea] Back     alignment and taxonomy information
>gi|332023466|gb|EGI63709.1| Teneurin-3 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|328785592|ref|XP_394215.4| PREDICTED: teneurin-3 isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|307196795|gb|EFN78238.1| Teneurin-3 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|345493429|ref|XP_001605548.2| PREDICTED: teneurin-3-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|350404731|ref|XP_003487201.1| PREDICTED: teneurin-3-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340721624|ref|XP_003399217.1| PREDICTED: teneurin-3-like [Bombus terrestris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query74
FB|FBgn0004449 2731 Ten-m "Tenascin major" [Drosop 0.905 0.024 0.647 4.7e-17
FB|FBgn0259240 3378 Ten-a "Tenascin accessory" [Dr 0.756 0.016 0.465 0.00033
FB|FBgn0004449 Ten-m "Tenascin major" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 227 (85.0 bits), Expect = 4.7e-17, P = 4.7e-17
 Identities = 46/71 (64%), Positives = 57/71 (80%)

Query:     1 MQDVVTSVFNNSHFLDVHFSHQDQDLFYFVKELPQKIRDDLDELKRLGSMFNITTHETAT 60
             +QDVV+SVFNNS+FLD+HFS  DQD+FYFVK+   K+RDD +EL+RLG MFNI+THE + 
Sbjct:  2538 VQDVVSSVFNNSYFLDLHFSIHDQDVFYFVKDNVLKLRDDNEELRRLGGMFNISTHEISD 2597

Query:    61 DG----KELRL 67
              G    KELRL
Sbjct:  2598 HGGSAAKELRL 2608




GO:0005578 "proteinaceous extracellular matrix" evidence=ISS
GO:0007155 "cell adhesion" evidence=ISS;IMP
GO:0005887 "integral to plasma membrane" evidence=IDA
GO:0008360 "regulation of cell shape" evidence=IMP
GO:0042051 "compound eye photoreceptor development" evidence=IMP
GO:0001745 "compound eye morphogenesis" evidence=IMP
GO:0048058 "compound eye corneal lens development" evidence=IMP
GO:0022416 "chaeta development" evidence=IMP
GO:0045467 "R7 cell development" evidence=IMP
GO:0031005 "filamin binding" evidence=IDA
GO:0008045 "motor neuron axon guidance" evidence=IMP
GO:0031594 "neuromuscular junction" evidence=IDA
GO:0051124 "synaptic growth at neuromuscular junction" evidence=IMP
GO:0045211 "postsynaptic membrane" evidence=IDA
GO:0016200 "synaptic target attraction" evidence=IMP
GO:0042802 "identical protein binding" evidence=IDA
FB|FBgn0259240 Ten-a "Tenascin accessory" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O61307TENM_DROMENo assigned EC number0.6250.81080.0219yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 74
KOG4659|consensus1899 99.72
>KOG4659|consensus Back     alignment and domain information
Probab=99.72  E-value=3.1e-18  Score=150.23  Aligned_cols=70  Identities=29%  Similarity=0.446  Sum_probs=60.9

Q ss_pred             cceEEeeecCeeEe-eeeEEeeccceEEEEe-cCCccccccHHHHhhhCCcceeEEEeeec--CCe---eeEEecccc
Q psy8783           2 QDVVTSVFNNSHFL-DVHFSHQDQDLFYFVK-ELPQKIRDDLDELKRLGSMFNITTHETAT--DGK---ELRLQKAHS   72 (74)
Q Consensus         2 rdv~asV~N~a~~L-~lhfti~gqDtfYFVK-~~~~~~~~D~~~Lr~L~~gvNvt~sq~~~--~g~---dv~l~~~~~   72 (74)
                      |+| +|++||++|| +|||+|||+|+||||| +++++..++.+++|+|++|||||+||++.  +|+   ||+||+|.+
T Consensus      1727 r~V-as~Lfna~ylldlhfti~g~dthyfvk~e~dl~~~~~~~grr~le~g~nvsvsq~s~~~ngrtk~~veLq~g~l 1803 (1899)
T KOG4659|consen 1727 REV-ASKLFNAVYLLDLHFTIEGPDTHYFVKPEGDLVLLGLTGGRRRLESGVNVSVSQISHFTNGRTKDDVELQNGAL 1803 (1899)
T ss_pred             HHH-HHHHhcceEeeeeEEEEecCceEEEEeccCceeecccccchhhhcCceEEEEeeehhhccccccceeEEecCcE
Confidence            556 5567777666 5999999999999999 89999999999999999999999999944  774   999999864




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00