Psyllid ID: psy8812

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
Protein Sequence
MRVRHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWRTDEFLLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVRGLQRGANSFTTSTAMAALELTARIVMAIQSSQRYTVP
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccHHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccEcEEEEEEHHHHHHHHcHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccHHccccccHHHHHHHHHcHHHHEEEcHHHHcccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mrvrhpvmttskatsnvlggvksqlVPDARKEAAHKWRTDEFLLGFNKLLSFMQAEWSQdiyknqlpsllggvgpmYSLVQLAQGIRDLFWLpieqyqkdgrivrglqrgansfTTSTAMAALELTARIVMAIQssqrytvp
Flexible Loop (DISEMBL)
mrvrhpvmttskatsnvlggvksqLVPDARKEAAHKWRTDEFLLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVRGLQRGANSFTTSTAMAALELTARIVMAiqssqrytvp
Low Complexity Region (SEG)
MRVRHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWRTDEFLLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVRGLQRGANSFTTSTAMAALELTARIVMAIQSSQRYTVP
Disordered region (IsUnstruct)
********************************AAHKWRTDEFLLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVRGLQRGANSFTTSTAMAALELTARIVMAI*********
Disordered Region (DISOPRED)
***RHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWRTDEFLLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVRGLQRGANSFTTSTAMAALELTARIVMAIQSSQRYT**
Disordered Region (DISEMBL)
***********KATSNVLGGVKSQLVPDARKEAAHKWRTDEFLLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVRGLQRGANSFTTSTAMAALELTARIVMAIQ********
Disordered Region (DISPRO)
*RVRHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWRTDEFLLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVRGLQRGANSFTTSTAMAALELTARIVMAIQSSQRYTV*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRVRHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWRTDEFLLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVRGLQRGANSFTTSTAMAALELTARIVMAIQSSQRYTVP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	142	2.2.26 [Sep-21-2011]
Q80XK6	2075	Autophagy-related protein	yes	N/A	0.661	0.045	0.712	2e-34
Q96BY7	2078	Autophagy-related protein	yes	N/A	0.661	0.045	0.712	4e-34
Q08D51	1997	Autophagy-related protein	yes	N/A	0.661	0.047	0.691	3e-33
Q6P4T0	1914	Autophagy-related protein	no	N/A	0.661	0.049	0.691	5e-33
Q2TAZ0	1938	Autophagy-related protein	no	N/A	0.661	0.048	0.691	2e-32
P0CM30	1935	Autophagy-related protein	yes	N/A	0.647	0.047	0.445	3e-19
P0CM31	1935	Autophagy-related protein	N/A	N/A	0.647	0.047	0.445	3e-19
Q4PFE7	2081	Autophagy-related protein	N/A	N/A	0.633	0.043	0.455	1e-18
Q0CSI0	2082	Autophagy-related protein	N/A	N/A	0.654	0.044	0.419	3e-17
Q2GYD8	2043	Autophagy-related protein	N/A	N/A	0.640	0.044	0.406	4e-17

>sp|Q80XK6|ATG2B_MOUSE Autophagy-related protein 2 homolog B OS=Mus musculus GN=Atg2b PE=1 SV=3

 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/94 (71%), Positives = 78/94 (82%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLG +KL S+  +EW  DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct: 1858 LLGIDKLFSYAISEWLSDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1917

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            IVRG QRGA SF TSTAMAALELT R+V  IQ++
Sbjct: 1918 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 1951

Mus musculus (taxid: 10090)

>sp|Q96BY7|ATG2B_HUMAN Autophagy-related protein 2 homolog B OS=Homo sapiens GN=ATG2B PE=1 SV=5

 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/94 (71%), Positives = 77/94 (81%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLG +KL S+   EW  DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct: 1861 LLGVDKLFSYAITEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1920

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            IVRG QRGA SF TSTAMAALELT R+V  IQ++
Sbjct: 1921 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 1954

Homo sapiens (taxid: 9606)

>sp|Q08D51|ATG2A_XENTR Autophagy-related protein 2 homolog A OS=Xenopus tropicalis GN=atg2a PE=2 SV=1

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 65/94 (69%), Positives = 79/94 (84%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLG +K++S+   EW  DI KNQLP +LGGVGPM+S+VQL  G+RDLFWLPIEQY+KDGR
Sbjct: 1777 LLGADKVVSYALNEWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWLPIEQYRKDGR 1836

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            I+RGLQRGA SF TSTA AALEL+ R+V AIQ++
Sbjct: 1837 IIRGLQRGAASFGTSTASAALELSNRLVQAIQAT 1870

Xenopus tropicalis (taxid: 8364)

>sp|Q6P4T0|ATG2A_MOUSE Autophagy-related protein 2 homolog A OS=Mus musculus GN=Atg2a PE=1 SV=2

 Score =  139 bits (350), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 65/94 (69%), Positives = 78/94 (82%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLG +K+L +   EW QDI KNQLP LLGGVGPM+S+VQL QG RDL WLPIEQY+KDGR
Sbjct: 1694 LLGVDKVLCYALNEWLQDIRKNQLPGLLGGVGPMHSVVQLFQGFRDLLWLPIEQYRKDGR 1753

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            ++RGLQRGA SF +STA AALEL+ R+V AIQ++
Sbjct: 1754 LIRGLQRGAASFGSSTASAALELSNRLVQAIQAT 1787

Mus musculus (taxid: 10090)

>sp|Q2TAZ0|ATG2A_HUMAN Autophagy-related protein 2 homolog A OS=Homo sapiens GN=ATG2A PE=1 SV=3

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/94 (69%), Positives = 78/94 (82%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLG +K+L +   EW QDI KNQLP LLGGVGPM+S+VQL QG RDL WLPIEQY+KDGR
Sbjct: 1718 LLGVDKVLGYALNEWLQDIRKNQLPGLLGGVGPMHSVVQLFQGFRDLLWLPIEQYRKDGR 1777

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            ++RGLQRGA SF +STA AALEL+ R+V AIQ++
Sbjct: 1778 LMRGLQRGAASFGSSTASAALELSNRLVQAIQAT 1811

Homo sapiens (taxid: 9606)

>sp|P0CM30|ATG2_CRYNJ Autophagy-related protein 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ATG2 PE=3 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 60/92 (65%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            + G  +L + +Q  W+ D+  NQL  ++ GV P+ S+V +  G+ DL  LPIEQY+KDGR
Sbjct: 1699 ITGLERLGTTLQDLWTPDVKANQLADVISGVSPIRSMVNVGSGVADLILLPIEQYRKDGR 1758

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQ 134
            I +G+QRG NSF  STA+  ++L AR+    Q
Sbjct: 1759 IAKGVQRGTNSFVKSTALEVMKLGARLATGTQ 1790

Required for cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes completion and peroxisome degradation.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

>sp|P0CM31|ATG2_CRYNB Autophagy-related protein 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ATG2 PE=3 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 60/92 (65%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            + G  +L + +Q  W+ D+  NQL  ++ GV P+ S+V +  G+ DL  LPIEQY+KDGR
Sbjct: 1699 ITGLERLGTTLQDLWTPDVKANQLADVISGVSPIRSMVNVGSGVADLILLPIEQYRKDGR 1758

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQ 134
            I +G+QRG NSF  STA+  ++L AR+    Q
Sbjct: 1759 IAKGVQRGTNSFVKSTALEVMKLGARLATGTQ 1790

Required for cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes completion and peroxisome degradation.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

>sp|Q4PFE7|ATG2_USTMA Autophagy-related protein 2 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ATG2 PE=3 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 58/90 (64%)

Query: 45   GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
            G+ +L   +   W+ D+  NQL   L G+GP+ SLV +  G+ DL  LPIEQY KDGR++
Sbjct: 1833 GWARLFDTLNDIWTPDVKANQLADFLSGLGPIRSLVNVGAGLADLVLLPIEQYHKDGRVL 1892

Query: 105  RGLQRGANSFTTSTAMAALELTARIVMAIQ 134
            RG+QRGA  F  +TA+ A++L AR+    Q
Sbjct: 1893 RGVQRGAAGFAKTTALEAVKLGARLATGTQ 1922

Required for cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes completion and in peroxisome degradation.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

>sp|Q0CSI0|ATG2_ASPTN Autophagy-related protein 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg2 PE=3 SV=1

 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 63/93 (67%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            + GF+KL   +   W  DI +NQLPS+L G+ P+ SLV +  G++DL  +P+ +Y+KDGR
Sbjct: 1861 IAGFDKLGQTLNDIWMPDIKRNQLPSVLAGLAPIRSLVNVGGGVKDLVVVPMREYRKDGR 1920

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQS 135
            IVR +Q+GA SF  +T+   ++L A++ +  Q+
Sbjct: 1921 IVRSIQKGAWSFAKTTSNELVKLGAKLAIGTQT 1953

Required for cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes completion and in peroxisome degradation.

Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663)

>sp|Q2GYD8|ATG2_CHAGB Autophagy-related protein 2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=ATG2 PE=3 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 59/91 (64%)

Query: 45   GFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIV 104
            GF++L   +   W+ D+ +NQLP +L G+ P+ SLV    G RDL  +PI +Y+KDGRIV
Sbjct: 1812 GFDRLGDQLNDIWTVDVKRNQLPGVLAGLAPVRSLVNAGSGFRDLIEIPIREYRKDGRIV 1871

Query: 105  RGLQRGANSFTTSTAMAALELTARIVMAIQS 135
            R L++GA +F  +T    ++L A++ +  Q+
Sbjct: 1872 RSLRKGATAFAKTTGTEVVKLGAKLAIGTQN 1902

Required for cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes completion and in peroxisome degradation.

Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) (taxid: 306901)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
380025889	2091	PREDICTED: autophagy-related protein 2 h	0.661	0.044	0.829	2e-40
328788524	2015	PREDICTED: autophagy-related protein 2 h	0.661	0.046	0.829	3e-40
383854334	2082	PREDICTED: autophagy-related protein 2 h	0.661	0.045	0.819	6e-40
340714656	2091	PREDICTED: LOW QUALITY PROTEIN: autophag	0.661	0.044	0.829	8e-40
345495823	2099	PREDICTED: LOW QUALITY PROTEIN: autophag	0.661	0.044	0.840	9e-40
307209687	2146	Autophagy-related protein 2-like protein	0.661	0.043	0.819	3e-39
332027647	2096	Autophagy-related protein 2-like protein	0.661	0.044	0.797	5e-39
307171264	2044	Autophagy-related protein 2-like protein	0.661	0.045	0.797	6e-39
350410969	2091	PREDICTED: autophagy-related protein 2 h	0.661	0.044	0.808	6e-39
242013933	2022	conserved hypothetical protein [Pediculu	0.661	0.046	0.755	2e-36

>gi|380025889|ref|XP_003696696.1| PREDICTED: autophagy-related protein 2 homolog A [Apis florea]

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 89/94 (94%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLGF+KL++F+ +EW QDI KNQLPSLLGGVGPM+SLVQL QGIRDLFWLPIEQYQKDGR
Sbjct: 1872 LLGFDKLVTFLLSEWLQDIKKNQLPSLLGGVGPMHSLVQLFQGIRDLFWLPIEQYQKDGR 1931

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            I+RGLQRGANSFTTSTAMAALELT+R++ AIQS+
Sbjct: 1932 IIRGLQRGANSFTTSTAMAALELTSRLIHAIQST 1965

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788524|ref|XP_001122229.2| PREDICTED: autophagy-related protein 2 homolog B [Apis mellifera]

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 78/94 (82%), Positives = 89/94 (94%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLGF+KL++F+ +EW QDI KNQLPSLLGGVGPM+SLVQL QGIRDLFWLPIEQYQKDGR
Sbjct: 1796 LLGFDKLVTFLLSEWLQDIKKNQLPSLLGGVGPMHSLVQLFQGIRDLFWLPIEQYQKDGR 1855

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            I+RGLQRGANSFTTSTAMAALELT+R++ AIQS+
Sbjct: 1856 IIRGLQRGANSFTTSTAMAALELTSRLIHAIQST 1889

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854334|ref|XP_003702676.1| PREDICTED: autophagy-related protein 2 homolog A [Megachile rotundata]

 Score =  168 bits (426), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 77/94 (81%), Positives = 88/94 (93%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLGF+KL++F+ +EW QDI KNQLPSLLGGVGPM+SLVQL QGIRDLFWLPIEQYQKDGR
Sbjct: 1863 LLGFDKLITFLLSEWLQDIKKNQLPSLLGGVGPMHSLVQLFQGIRDLFWLPIEQYQKDGR 1922

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            I+RGLQRGANSFTTST MAALELT+R++ AIQS+
Sbjct: 1923 IIRGLQRGANSFTTSTVMAALELTSRLIHAIQST 1956

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714656|ref|XP_003395842.1| PREDICTED: LOW QUALITY PROTEIN: autophagy-related protein 2 homolog A-like [Bombus terrestris]

 Score =  168 bits (425), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 88/94 (93%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLGF+KL++F+ +EW QDI KNQLPSLLGGVGPM+SLVQL QGIRDLFWLPIEQYQKDGR
Sbjct: 1872 LLGFDKLVTFLLSEWLQDIKKNQLPSLLGGVGPMHSLVQLFQGIRDLFWLPIEQYQKDGR 1931

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            I RGLQRGANSFTTSTAMAALELT+R++ AIQS+
Sbjct: 1932 IFRGLQRGANSFTTSTAMAALELTSRLIHAIQST 1965

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495823|ref|XP_003427582.1| PREDICTED: LOW QUALITY PROTEIN: autophagy-related protein 2 homolog A [Nasonia vitripennis]

 Score =  167 bits (424), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 79/94 (84%), Positives = 88/94 (93%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLG +KL+S++ AEW QDI KNQLPSLLGGVGPMYSLVQL QGIRDLFWLPIEQYQKDGR
Sbjct: 1880 LLGSDKLISYLLAEWIQDIKKNQLPSLLGGVGPMYSLVQLFQGIRDLFWLPIEQYQKDGR 1939

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            IVRGLQRGANSF+TSTAMAALELT+R+V A+QS+
Sbjct: 1940 IVRGLQRGANSFSTSTAMAALELTSRLVHALQST 1973

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307209687|gb|EFN86545.1| Autophagy-related protein 2-like protein A [Harpegnathos saltator]

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 77/94 (81%), Positives = 87/94 (92%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLG++KLL+++ +EW QDI KNQLP LL GVGPMYS+VQL QGIRDLFWLPIEQYQKDGR
Sbjct: 1928 LLGYDKLLAYLASEWLQDIKKNQLPGLLSGVGPMYSVVQLFQGIRDLFWLPIEQYQKDGR 1987

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            IVRGLQRGANSFTTSTAMAALELT+R+V AIQS+
Sbjct: 1988 IVRGLQRGANSFTTSTAMAALELTSRLVQAIQST 2021

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027647|gb|EGI67715.1| Autophagy-related protein 2-like protein B [Acromyrmex echinatior]

 Score =  165 bits (418), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 75/94 (79%), Positives = 86/94 (91%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLG++KL +++ +EW QDI KNQLPSLLGGVGPMYS+VQL QGIRDLFWLPIEQYQ+DGR
Sbjct: 1878 LLGYDKLFTYLVSEWLQDIKKNQLPSLLGGVGPMYSVVQLFQGIRDLFWLPIEQYQRDGR 1937

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            IVRGLQRGANSFTT TAMAALELT RIV A+Q++
Sbjct: 1938 IVRGLQRGANSFTTCTAMAALELTCRIVQALQTT 1971

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307171264|gb|EFN63197.1| Autophagy-related protein 2-like protein B [Camponotus floridanus]

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 75/94 (79%), Positives = 87/94 (92%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLG++KLL+++ +EW QDI KNQLPSLLGGVGPM+S+VQL QGIRDLFWLPIEQYQ+DGR
Sbjct: 1826 LLGYDKLLTYLASEWLQDIKKNQLPSLLGGVGPMHSVVQLFQGIRDLFWLPIEQYQRDGR 1885

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            IVRGLQRGANSFTT TAMAALELT RIV A+Q++
Sbjct: 1886 IVRGLQRGANSFTTCTAMAALELTCRIVQALQTT 1919

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350410969|ref|XP_003489196.1| PREDICTED: autophagy-related protein 2 homolog A-like [Bombus impatiens]

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 76/94 (80%), Positives = 88/94 (93%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLGF+KL++F+ +EW +DI KNQLPSLLGGVGPM+SLVQL QGIRDLFWLPIEQYQKDGR
Sbjct: 1872 LLGFDKLVTFLLSEWLRDIKKNQLPSLLGGVGPMHSLVQLFQGIRDLFWLPIEQYQKDGR 1931

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            + RGLQRGANSFTTSTAMAALELT+R++ AIQS+
Sbjct: 1932 LFRGLQRGANSFTTSTAMAALELTSRLIHAIQST 1965

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013933|ref|XP_002427653.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212512083|gb|EEB14915.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/94 (75%), Positives = 84/94 (89%)

Query: 43   LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
            LLGF+KLL+F+  EW+ DI KNQLPSLLGGVGPM+SLVQL QGIRDL WLPIEQYQKDGR
Sbjct: 1806 LLGFDKLLNFVLLEWANDIKKNQLPSLLGGVGPMHSLVQLIQGIRDLLWLPIEQYQKDGR 1865

Query: 103  IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
            ++RG QRGANSFTTSTAMA+LEL +R++  IQ++
Sbjct: 1866 LMRGFQRGANSFTTSTAMASLELISRLIQIIQTT 1899

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
UNIPROTKB|F1SAR2	235	F1SAR2 "Uncharacterized protei	0.661	0.4	0.702	1.4e-30
MGI|MGI:1923809	2075	Atg2b "autophagy related 2B" [	0.661	0.045	0.712	1.6e-29
UNIPROTKB|F1MAF8	2075	F1MAF8 "Uncharacterized protei	0.661	0.045	0.712	2e-29
UNIPROTKB|Q96BY7	2078	ATG2B "Autophagy-related prote	0.661	0.045	0.712	2.6e-29
UNIPROTKB|E1C8G3	2077	ATG2B "Uncharacterized protein	0.647	0.044	0.728	3.3e-29
UNIPROTKB|F1PFK1	2077	ATG2B "Uncharacterized protein	0.661	0.045	0.712	3.3e-29
UNIPROTKB|E1BH30	2082	ATG2B "Uncharacterized protein	0.661	0.045	0.712	3.4e-29
UNIPROTKB|D7RA36	2077	ATG2B "Autophagy related 2-lik	0.661	0.045	0.702	7e-29
RGD|1589890	1916	Atg2a "autophagy related 2A" [	0.661	0.049	0.691	1.7e-28
MGI|MGI:1916291	1914	Atg2a "autophagy related 2A" [	0.661	0.049	0.691	2.1e-28

UNIPROTKB|F1SAR2 F1SAR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 66/94 (70%), Positives = 77/94 (81%)

Query:    43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
             LLG +KL ++   EW  DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct:    18 LLGVDKLFAYAITEWLTDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 77

Query:   103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
             IVRG QRGA SF TSTAMAALELT R+V  IQ++
Sbjct:    78 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 111

GO:0006914 "autophagy" evidence=IEA

MGI|MGI:1923809 Atg2b "autophagy related 2B" [Mus musculus (taxid:10090)]

 Score = 343 (125.8 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 67/94 (71%), Positives = 78/94 (82%)

Query:    43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
             LLG +KL S+  +EW  DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct:  1858 LLGIDKLFSYAISEWLSDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1917

Query:   103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
             IVRG QRGA SF TSTAMAALELT R+V  IQ++
Sbjct:  1918 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 1951

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006914 "autophagy" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1MAF8 F1MAF8 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 342 (125.4 bits), Expect = 2.0e-29, P = 2.0e-29
 Identities = 67/94 (71%), Positives = 77/94 (81%)

Query:    43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
             LLG +KL S+   EW  DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct:  1858 LLGIDKLFSYAITEWLSDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1917

Query:   103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
             IVRG QRGA SF TSTAMAALELT R+V  IQ++
Sbjct:  1918 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 1951

GO:0006914 "autophagy" evidence=IEA

UNIPROTKB|Q96BY7 ATG2B "Autophagy-related protein 2 homolog B" [Homo sapiens (taxid:9606)]

 Score = 341 (125.1 bits), Expect = 2.6e-29, P = 2.6e-29
 Identities = 67/94 (71%), Positives = 77/94 (81%)

Query:    43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
             LLG +KL S+   EW  DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct:  1861 LLGVDKLFSYAITEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1920

Query:   103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
             IVRG QRGA SF TSTAMAALELT R+V  IQ++
Sbjct:  1921 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 1954

GO:0006914 "autophagy" evidence=IEA

UNIPROTKB|E1C8G3 ATG2B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 340 (124.7 bits), Expect = 3.3e-29, P = 3.3e-29
 Identities = 67/92 (72%), Positives = 76/92 (82%)

Query:    43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
             LLG +KL S+  +EW  DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct:  1860 LLGVDKLFSYAISEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1919

Query:   103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQ 134
             IVRG QRGA SF TSTAMAALELT R+V  IQ
Sbjct:  1920 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQ 1951

GO:0006914 "autophagy" evidence=IEA

UNIPROTKB|F1PFK1 ATG2B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 340 (124.7 bits), Expect = 3.3e-29, P = 3.3e-29
 Identities = 67/94 (71%), Positives = 77/94 (81%)

Query:    43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
             LLG +KL S+   EW  DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct:  1860 LLGVDKLFSYAITEWLTDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1919

Query:   103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
             IVRG QRGA SF TSTAMAALELT R+V  IQ++
Sbjct:  1920 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 1953

GO:0006914 "autophagy" evidence=IEA

UNIPROTKB|E1BH30 ATG2B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 340 (124.7 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 67/94 (71%), Positives = 77/94 (81%)

Query:    43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
             LLG +KL S+   EW  DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct:  1865 LLGVDKLFSYAITEWLTDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1924

Query:   103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
             IVRG QRGA SF TSTAMAALELT R+V  IQ++
Sbjct:  1925 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 1958

GO:0006914 "autophagy" evidence=IEA

UNIPROTKB|D7RA36 ATG2B "Autophagy related 2-like protein B" [Sus scrofa (taxid:9823)]

 Score = 337 (123.7 bits), Expect = 7.0e-29, P = 7.0e-29
 Identities = 66/94 (70%), Positives = 77/94 (81%)

Query:    43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
             LLG +KL ++   EW  DI KNQLP +LGGVGPM+SLVQL QG++DL WLPIEQY+KDGR
Sbjct:  1860 LLGVDKLFAYAITEWLTDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR 1919

Query:   103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
             IVRG QRGA SF TSTAMAALELT R+V  IQ++
Sbjct:  1920 IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAA 1953

GO:0006914 "autophagy" evidence=IEA

RGD|1589890 Atg2a "autophagy related 2A" [Rattus norvegicus (taxid:10116)]

 Score = 333 (122.3 bits), Expect = 1.7e-28, P = 1.7e-28
 Identities = 65/94 (69%), Positives = 78/94 (82%)

Query:    43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
             LLG +K+L +   EW QDI KNQLP LLGGVGPM+S+VQL QG RDL WLPIEQY+KDGR
Sbjct:  1696 LLGVDKVLGYALNEWLQDIRKNQLPGLLGGVGPMHSVVQLFQGFRDLLWLPIEQYRKDGR 1755

Query:   103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
             ++RGLQRGA SF +STA AALEL+ R+V AIQ++
Sbjct:  1756 LIRGLQRGAASFGSSTASAALELSNRLVQAIQAT 1789

GO:0006914 "autophagy" evidence=IEA

MGI|MGI:1916291 Atg2a "autophagy related 2A" [Mus musculus (taxid:10090)]

 Score = 332 (121.9 bits), Expect = 2.1e-28, P = 2.1e-28
 Identities = 65/94 (69%), Positives = 78/94 (82%)

Query:    43 LLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGR 102
             LLG +K+L +   EW QDI KNQLP LLGGVGPM+S+VQL QG RDL WLPIEQY+KDGR
Sbjct:  1694 LLGVDKVLCYALNEWLQDIRKNQLPGLLGGVGPMHSVVQLFQGFRDLLWLPIEQYRKDGR 1753

Query:   103 IVRGLQRGANSFTTSTAMAALELTARIVMAIQSS 136
             ++RGLQRGA SF +STA AALEL+ R+V AIQ++
Sbjct:  1754 LIRGLQRGAASFGSSTASAALELSNRLVQAIQAT 1787

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006914 "autophagy" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q96BY7	ATG2B_HUMAN	No assigned EC number	0.7127	0.6619	0.0452	yes	N/A
Q08D51	ATG2A_XENTR	No assigned EC number	0.6914	0.6619	0.0470	yes	N/A
Q80XK6	ATG2B_MOUSE	No assigned EC number	0.7127	0.6619	0.0453	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	142
pfam09333	98	pfam09333, ATG_C, ATG C terminal domain	1e-05

>gnl|CDD|192254 pfam09333, ATG_C, ATG C terminal domain

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 13/33 (39%), Positives = 24/33 (72%)

Query: 6  PVMTTSKATSNVLGGVKSQLVPDARKEAAHKWR 38
          P++  ++A S  L G+++QL PDAR+E+  K++
Sbjct: 66 PIIGATEAVSKTLLGLRNQLDPDAREESRDKYK 98

ATG2 (also known as Apg2) is a peripheral membrane protein. It functions in both cytoplasm to vacuole targeting and autophagy. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	142
KOG2993|consensus	1738		100.0
PF09333	98	ATG_C: ATG C terminal domain; InterPro: IPR015412	97.28
PF09333	98	ATG_C: ATG C terminal domain; InterPro: IPR015412	95.01
COG5043	2552	MRS6 Vacuolar protein sorting-associated protein [	94.42

>KOG2993|consensus

Probab=100.00  E-value=8.2e-35  Score=281.39  Aligned_cols=115  Identities=53%  Similarity=0.807  Sum_probs=111.0

Q ss_pred             cChHHHhhhhhhhhc-cccCHHHHHHHHHHHhhHHhhhcchhhhhcCCCchHHHHHHhhhHHHHHHhhHHHHhhcCchhH
Q psy8812          27 PDARKEAAHKWRTDE-FLLGFNKLLSFMQAEWSQDIYKNQLPSLLGGVGPMYSLVQLAQGIRDLFWLPIEQYQKDGRIVR  105 (142)
Q Consensus        27 Pd~~~ea~~K~r~l~-Gi~G~~~l~~~l~~~W~~dI~~~Ql~~vl~Gv~Pirslv~ig~G~~dLv~~Pi~eYrkDGri~r  105 (142)
                      -..+.|..+|..+.| |++||+++++++.++|++||++||||++|.||+|+||++++|+|++|||++||++||||||++|
T Consensus      1502 qlqgsEl~Lk~l~~~~Gl~G~d~l~~~ll~eWl~DI~kNQLp~vL~Gv~pvrSl~~L~~g~kdLv~~PIe~yrkDgrlvr 1581 (1738)
T KOG2993|consen 1502 QLQGSELKLKRLVIRHGLLGWDKLFNYLLNEWLQDIKKNQLPGVLGGVGPVRSLVQLGQGFKDLVWLPIEQYRKDGRLVR 1581 (1738)
T ss_pred             HhcccHHHHHHHHHHHhhhhHHHHHHHHHhhhhHHHhhhhhhhhhcCcccHHHHHHHHHHHHHHHhhhHHHhhccceeee
Confidence            346778888888888 9999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy8812         106 GLQRGANSFTTSTAMAALELTARIVMAIQSSQRYTV  141 (142)
Q Consensus       106 glqkG~~sF~ktt~~e~l~Lg~r~a~~tQ~~lE~a~  141 (142)
                      |+|||+.+|.++|+.++|+|++|++++||++||+|+
T Consensus      1582 glq~G~~~F~~sts~~av~L~~~l~~g~qa~ae~te 1617 (1738)
T KOG2993|consen 1582 GLQRGAASFLPSTSLAAVGLGVRLTQGTQALAETTE 1617 (1738)
T ss_pred             cccccchhhhhHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999996

>PF09333 ATG_C: ATG C terminal domain; InterPro: IPR015412 Eukaryotes have developed an evolutionarily conserved process, termed autophagy, to survive starvation conditions

Probab=97.28  E-value=2.6e-05  Score=56.25  Aligned_cols=36  Identities=36%  Similarity=0.679  Sum_probs=34.2

Q ss_pred             ccccceeccccccccccccccccccChHHHhhhhhh
Q psy8812           3 VRHPVMTTSKATSNVLGGVKSQLVPDARKEAAHKWR   38 (142)
Q Consensus         3 ~~~~~~~~~~~~~n~l~g~r~~lvPd~~~ea~~K~r   38 (142)
                      +++|++-++||+++.|+|+||++-|+.+.|...||.
T Consensus        63 vvkP~iG~~ea~s~~l~Gi~N~l~p~~~~e~~~Kyk   98 (98)
T PF09333_consen   63 VVKPMIGATEAVSKTLQGIRNQLDPDRRQEEEDKYK   98 (98)
T ss_pred             HHhhHHHHHHHHHHHHHHHHhcCCchhHHHHHhccC
Confidence            689999999999999999999999999999999984

The vacuole or lysosome mediates the turnover and recycling of non-essential intracellular material for re-use in critical biosynthetic reactions. ATG2 (also known as Apg2) is required for the formation and/or completion of cytosolic sequestering vesicles that are needed for vacuolar import through both the Cvt pathway and autophagy, as well as for the specific degradation of peroxisomes. Apg2 is a peripheral membrane protein that localises to the previously identified perivacuolar compartment that contains Apg9 []. This entry represents the C-terminal domain of Apg2 and related proteins.

>PF09333 ATG_C: ATG C terminal domain; InterPro: IPR015412 Eukaryotes have developed an evolutionarily conserved process, termed autophagy, to survive starvation conditions

Probab=95.01  E-value=0.1  Score=37.55  Aligned_cols=58  Identities=22%  Similarity=0.385  Sum_probs=49.7

Q ss_pred             HHhhhHHHHHHhhHHHHhhcC--chhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8812          81 QLAQGIRDLFWLPIEQYQKDG--RIVRGLQRGANSFTTSTAMAALELTARIVMAIQSSQR  138 (142)
Q Consensus        81 ~ig~G~~dLv~~Pi~eYrkDG--ri~rglqkG~~sF~ktt~~e~l~Lg~r~a~~tQ~~lE  138 (142)
                      .|.+|+.+++..|++.|+++|  .+++|+-||+--.+-.=...+.+..++...|+.+-++
T Consensus        27 g~~~~~~~i~~~p~~~~~~~g~~g~~~gv~kgvp~~vvkP~iG~~ea~s~~l~Gi~N~l~   86 (98)
T PF09333_consen   27 GLQSGASGIVAKPIEGAQQEGVKGFVKGVGKGVPGAVVKPMIGATEAVSKTLQGIRNQLD   86 (98)
T ss_pred             HHHHHHHHHHHhHHHHHhccChHHHHHHHHHhchHHHHhhHHHHHHHHHHHHHHHHhcCC
Confidence            467789999999999999765  6899999999888888888889999999998887654

The vacuole or lysosome mediates the turnover and recycling of non-essential intracellular material for re-use in critical biosynthetic reactions. ATG2 (also known as Apg2) is required for the formation and/or completion of cytosolic sequestering vesicles that are needed for vacuolar import through both the Cvt pathway and autophagy, as well as for the specific degradation of peroxisomes. Apg2 is a peripheral membrane protein that localises to the previously identified perivacuolar compartment that contains Apg9 []. This entry represents the C-terminal domain of Apg2 and related proteins.

>COG5043 MRS6 Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]

Probab=94.42  E-value=0.014  Score=60.02  Aligned_cols=104  Identities=18%  Similarity=0.338  Sum_probs=79.8

Q ss_pred             ccChHHHhh-hhhhhhccccCHHHHHHHHHHHhhHHhhhcchhhhhcCC----CchHHHHHHhhhHHHHHHhhHHHHh--
Q psy8812          26 VPDARKEAA-HKWRTDEFLLGFNKLLSFMQAEWSQDIYKNQLPSLLGGV----GPMYSLVQLAQGIRDLFWLPIEQYQ--   98 (142)
Q Consensus        26 vPd~~~ea~-~K~r~l~Gi~G~~~l~~~l~~~W~~dI~~~Ql~~vl~Gv----~Pirslv~ig~G~~dLv~~Pi~eYr--   98 (142)
                      .+|++++.. .+--+.++  -.+++.+.+.+.+++.+ .-|++++++..    -|+-=+-++.+|++||++-|.+.|=  
T Consensus      2200 indapvrlnsl~~dNa~~--sl~~l~d~i~shY~qq~-~~qi~Ki~g~aD~lGNpvglfetvssGv~DlFyEP~~g~~l~ 2276 (2552)
T COG5043        2200 INDAPVRLNSLLMDNARV--SLPELFDLIASHYLQQV-EYQIYKILGSADFLGNPVGLFETVSSGVSDLFYEPYQGRFLV 2276 (2552)
T ss_pred             cccchhHHhhHhhhccCC--cHHHHHHHHHHHHHHHH-HHHHHHhhcchhhcCCcceeeeccccchhhccccccceeeec
Confidence            356666553 34444443  35899999999999997 47899999865    3666677899999999999999884  


Q ss_pred             -hcCchhHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8812          99 -KDGRIVRGLQRGANSFTTSTAMAALELTARIVMA  132 (142)
Q Consensus        99 -kDGri~rglqkG~~sF~ktt~~e~l~Lg~r~a~~  132 (142)
                       +..++.+|+.||++||+|.|.++.=+--.|+...
T Consensus      2277 ~~~~~~g~~iAkG~~SFikkti~GvsdsvsK~tgs 2311 (2552)
T COG5043        2277 DNSQEWGIGIAKGGNSFIKKTIYGVSDSVSKFTGS 2311 (2552)
T ss_pred             cCcceeceeeccchhHHHHHhhccccchhHhhhcc
Confidence             3458889999999999999998876665555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00