Psyllid ID: psy8899

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70---
Protein Sequence
MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLRLDKANRIE
Secondary Structure (PSIPRED)
cEEEEEEEEcccHHHHHHHHHccccccccccccccccccccccEEEEEEcccccEEEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEcccccHHHHHHHHHHHHccccccccEEcccccccccccEEEEEEcccccHHHHHHHEEcccccccccc
Coil and Loop (DISEMBL)
mfvlgtanhskSFLQFNAikmahappghhsvmgrpssgglyfpeyVVYRGEQMCISYLAKNLYLRLDKANRIE
Flexible Loop (DISEMBL)
MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNlylrldkanrie
Low Complexity Region (SEG)
MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLRLDKANRIE
Disordered region (IsUnstruct)
************FLQFNAIK*****************GGLYFPEYVVYRGEQMCISYLAKNLYLRLD******
Disordered Region (DISOPRED)
MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLY**********
Disordered Region (DISEMBL)
********HSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLRLDKANRIE
Disordered Region (DISPRO)
MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLRLDKA****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLRLDKANRIE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	73	2.2.26 [Sep-21-2011]
O95271	1327	Tankyrase-1 OS=Homo sapie	yes	N/A	0.657	0.036	0.708	1e-14
Q6PFX9	1320	Tankyrase-1 OS=Mus muscul	yes	N/A	0.657	0.036	0.708	2e-14
Q3UES3	1166	Tankyrase-2 OS=Mus muscul	no	N/A	0.657	0.041	0.708	3e-14
Q9H2K2	1166	Tankyrase-2 OS=Homo sapie	no	N/A	0.657	0.041	0.708	3e-14

>sp|O95271|TNKS1_HUMAN Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct: 1258 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 1305

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 3EC: 0

>sp|Q6PFX9|TNKS1_MOUSE Tankyrase-1 OS=Mus musculus GN=Tnks PE=1 SV=1

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct: 1251 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 1298

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: 0

>sp|Q3UES3|TNKS2_MOUSE Tankyrase-2 OS=Mus musculus GN=Tnks2 PE=2 SV=2

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/48 (70%), Positives = 38/48 (79%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAH+PPGHHSV GRPS  GL   EYV+YRGEQ    YL
Sbjct: 1105 KSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYL 1152

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles (By similarity).$.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: 0

>sp|Q9H2K2|TNKS2_HUMAN Tankyrase-2 OS=Homo sapiens GN=TNKS2 PE=1 SV=1

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/48 (70%), Positives = 38/48 (79%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAH+PPGHHSV GRPS  GL   EYV+YRGEQ    YL
Sbjct: 1105 KSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYL 1152


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.138    0.420 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,046,942
Number of Sequences: 539616
Number of extensions: 984419
Number of successful extensions: 2293
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2289
Number of HSP's gapped (non-prelim): 4
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
242017239	1151	Tankyrase-1, putative [Pediculus humanus	0.657	0.041	0.833	4e-17
347966850	1155	AGAP001947-PA [Anopheles gambiae str. PE	0.657	0.041	0.812	1e-16
157136041	1204	tankyrase [Aedes aegypti] gi|108881109|g	0.657	0.039	0.812	1e-16
332029075	1234	Tankyrase-1 [Acromyrmex echinatior]	0.657	0.038	0.833	1e-16
322799153	1240	hypothetical protein SINV_04047 [Solenop	0.657	0.038	0.833	1e-16
307185654	1206	Tankyrase-1 [Camponotus floridanus]	0.657	0.039	0.833	1e-16
340725973	1208	PREDICTED: tankyrase-1-like [Bombus terr	0.657	0.039	0.833	1e-16
328779905	1193	PREDICTED: tankyrase-1 isoform 1 [Apis m	0.657	0.040	0.833	1e-16
328779903	1208	PREDICTED: tankyrase-1 isoform 2 [Apis m	0.657	0.039	0.833	1e-16
350397200	1208	PREDICTED: tankyrase-1-like [Bombus impa	0.657	0.039	0.833	1e-16

>gi|242017239|ref|XP_002429099.1| Tankyrase-1, putative [Pediculus humanus corporis] gi|212513963|gb|EEB16361.1| Tankyrase-1, putative [Pediculus humanus corporis]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/48 (83%), Positives = 44/48 (91%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAHAPPGHHSV+GRPS+GGLYFPEYVVYRGEQ    YL
Sbjct: 1090 KSFLQFSAMKMAHAPPGHHSVVGRPSAGGLYFPEYVVYRGEQAYPEYL 1137

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347966850|ref|XP_321116.5| AGAP001947-PA [Anopheles gambiae str. PEST] gi|333469871|gb|EAA01120.5| AGAP001947-PA [Anopheles gambiae str. PEST]

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/48 (81%), Positives = 44/48 (91%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAHAPPGHHSV+GRPS+GGL+FPEYVVYRGEQ    YL
Sbjct: 1089 KSFLQFSAMKMAHAPPGHHSVIGRPSAGGLHFPEYVVYRGEQAYPEYL 1136

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157136041|ref|XP_001656741.1| tankyrase [Aedes aegypti] gi|108881109|gb|EAT45334.1| AAEL003391-PA [Aedes aegypti]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/48 (81%), Positives = 44/48 (91%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAHAPPGHHSV+GRPS+GGL+FPEYVVYRGEQ    YL
Sbjct: 1138 KSFLQFSAMKMAHAPPGHHSVIGRPSAGGLHFPEYVVYRGEQAYPEYL 1185

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332029075|gb|EGI69089.1| Tankyrase-1 [Acromyrmex echinatior]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/48 (83%), Positives = 42/48 (87%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAHAPPGHHSVMGRPS GGL FPEYVVYRGEQ    YL
Sbjct: 1118 KSFLQFSAMKMAHAPPGHHSVMGRPSQGGLVFPEYVVYRGEQAYPEYL 1165

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322799153|gb|EFZ20592.1| hypothetical protein SINV_04047 [Solenopsis invicta]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/48 (83%), Positives = 42/48 (87%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAHAPPGHHSVMGRPS GGL FPEYVVYRGEQ    YL
Sbjct: 1142 KSFLQFSAMKMAHAPPGHHSVMGRPSQGGLVFPEYVVYRGEQAYPEYL 1189

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307185654|gb|EFN71576.1| Tankyrase-1 [Camponotus floridanus]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/48 (83%), Positives = 42/48 (87%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAHAPPGHHSVMGRPS GGL FPEYVVYRGEQ    YL
Sbjct: 1138 KSFLQFSAMKMAHAPPGHHSVMGRPSQGGLVFPEYVVYRGEQAYPEYL 1185

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725973|ref|XP_003401338.1| PREDICTED: tankyrase-1-like [Bombus terrestris]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/48 (83%), Positives = 42/48 (87%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAHAPPGHHSVMGRPS GGL FPEYVVYRGEQ    YL
Sbjct: 1140 KSFLQFSAMKMAHAPPGHHSVMGRPSQGGLAFPEYVVYRGEQAYPEYL 1187

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779905|ref|XP_003249717.1| PREDICTED: tankyrase-1 isoform 1 [Apis mellifera]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/48 (83%), Positives = 42/48 (87%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAHAPPGHHSVMGRPS GGL FPEYVVYRGEQ    YL
Sbjct: 1125 KSFLQFSAMKMAHAPPGHHSVMGRPSQGGLAFPEYVVYRGEQAYPEYL 1172

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779903|ref|XP_396483.4| PREDICTED: tankyrase-1 isoform 2 [Apis mellifera]

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/48 (83%), Positives = 42/48 (87%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAHAPPGHHSVMGRPS GGL FPEYVVYRGEQ    YL
Sbjct: 1140 KSFLQFSAMKMAHAPPGHHSVMGRPSQGGLAFPEYVVYRGEQAYPEYL 1187

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350397200|ref|XP_003484803.1| PREDICTED: tankyrase-1-like [Bombus impatiens]

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/48 (83%), Positives = 42/48 (87%)

Query: 11   KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            KSFLQF+A+KMAHAPPGHHSVMGRPS GGL FPEYVVYRGEQ    YL
Sbjct: 1140 KSFLQFSAMKMAHAPPGHHSVMGRPSQGGLAFPEYVVYRGEQAYPEYL 1187

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
FB|FBgn0027508	1181	tankyrase "tankyrase" [Drosoph	0.657	0.040	0.770	6.2e-15
UNIPROTKB|H0YAW5	61	TNKS "Tankyrase-1" [Homo sapie	0.589	0.704	0.744	4.9e-14
ZFIN|ZDB-GENE-030131-4865	1267	si:ch211-155m12.3 "si:ch211-15	0.657	0.037	0.729	2.1e-13
ZFIN|ZDB-GENE-030131-7450	1280	tnks "tankyrase, TRF1-interact	0.657	0.037	0.729	2.1e-13
UNIPROTKB|E7EQ52	1090	TNKS "Tankyrase-1" [Homo sapie	0.657	0.044	0.708	4.6e-13
UNIPROTKB|F1P1N0	1269	TNKS "Uncharacterized protein"	0.657	0.037	0.708	5.6e-13
MGI|MGI:1341087	1320	Tnks "tankyrase, TRF1-interact	0.657	0.036	0.708	5.9e-13
UNIPROTKB|E1B8R5	1327	TNKS "Uncharacterized protein"	0.657	0.036	0.708	5.9e-13
UNIPROTKB|E2QU22	1327	TNKS "Uncharacterized protein"	0.657	0.036	0.708	5.9e-13
UNIPROTKB|O95271	1327	TNKS "Tankyrase-1" [Homo sapie	0.657	0.036	0.708	5.9e-13

FB|FBgn0027508 tankyrase "tankyrase" [Drosophila melanogaster (taxid:7227)]

 Score = 203 (76.5 bits), Expect = 6.2e-15, P = 6.2e-15
 Identities = 37/48 (77%), Positives = 43/48 (89%)

Query:    11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
             KSFLQ++A+KMAHAPPGHHSV+GRPS+GGL+F EYVVYRGEQ    YL
Sbjct:  1115 KSFLQYSAMKMAHAPPGHHSVVGRPSAGGLHFAEYVVYRGEQSYPEYL 1162

GO:0007016 "cytoskeletal anchoring at plasma membrane" evidence=ISS

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

GO:0035220 "wing disc development" evidence=IGI

GO:0022416 "chaeta development" evidence=IGI

UNIPROTKB|H0YAW5 TNKS "Tankyrase-1" [Homo sapiens (taxid:9606)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 32/43 (74%), Positives = 38/43 (88%)

Query:    11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQM 53
             KSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ+
Sbjct:     3 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQV 45

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

ZFIN|ZDB-GENE-030131-4865 si:ch211-155m12.3 "si:ch211-155m12.3" [Danio rerio (taxid:7955)]

 Score = 189 (71.6 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 35/48 (72%), Positives = 40/48 (83%)

Query:    11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
             KSFLQF+A+KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct:  1198 KSFLQFSAMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 1245

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

ZFIN|ZDB-GENE-030131-7450 tnks "tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase" [Danio rerio (taxid:7955)]

 Score = 189 (71.6 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 35/48 (72%), Positives = 40/48 (83%)

Query:    11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
             KSFLQF+A+KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct:  1211 KSFLQFSAMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 1258

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

UNIPROTKB|E7EQ52 TNKS "Tankyrase-1" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 4.6e-13, P = 4.6e-13
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query:    11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
             KSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct:  1021 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 1068

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

UNIPROTKB|F1P1N0 TNKS "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 185 (70.2 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query:    11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
             KSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct:  1200 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 1247

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0000784 "nuclear chromosome, telomeric region" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0032212 "positive regulation of telomere maintenance via telomerase" evidence=IEA

GO:0043392 "negative regulation of DNA binding" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0070198 "protein localization to chromosome, telomeric region" evidence=IEA

GO:0070212 "protein poly-ADP-ribosylation" evidence=IEA

GO:0070213 "protein auto-ADP-ribosylation" evidence=IEA

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

MGI|MGI:1341087 Tnks "tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase" [Mus musculus (taxid:10090)]

 Score = 185 (70.2 bits), Expect = 5.9e-13, P = 5.9e-13
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query:    11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
             KSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct:  1251 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 1298

GO:0000209 "protein polyubiquitination" evidence=ISO

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0000781 "chromosome, telomeric region" evidence=ISO

GO:0000784 "nuclear chromosome, telomeric region" evidence=ISO

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=ISO

GO:0005634 "nucleus" evidence=IEA

GO:0005643 "nuclear pore" evidence=IEA

GO:0005694 "chromosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006471 "protein ADP-ribosylation" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=ISO

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO

GO:0018107 "peptidyl-threonine phosphorylation" evidence=ISO

GO:0032212 "positive regulation of telomere maintenance via telomerase" evidence=ISO

GO:0043392 "negative regulation of DNA binding" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051028 "mRNA transport" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0070198 "protein localization to chromosome, telomeric region" evidence=ISO

GO:0070212 "protein poly-ADP-ribosylation" evidence=ISO

GO:0070213 "protein auto-ADP-ribosylation" evidence=ISO

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=ISO

UNIPROTKB|E1B8R5 TNKS "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 185 (70.2 bits), Expect = 5.9e-13, P = 5.9e-13
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query:    11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
             KSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct:  1258 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 1305

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0070213 "protein auto-ADP-ribosylation" evidence=IEA

GO:0070212 "protein poly-ADP-ribosylation" evidence=IEA

GO:0070198 "protein localization to chromosome, telomeric region" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043392 "negative regulation of DNA binding" evidence=IEA

GO:0032212 "positive regulation of telomere maintenance via telomerase" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000784 "nuclear chromosome, telomeric region" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

UNIPROTKB|E2QU22 TNKS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 185 (70.2 bits), Expect = 5.9e-13, P = 5.9e-13
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query:    11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
             KSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct:  1258 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 1305

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0070213 "protein auto-ADP-ribosylation" evidence=IEA

GO:0070212 "protein poly-ADP-ribosylation" evidence=IEA

GO:0070198 "protein localization to chromosome, telomeric region" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043392 "negative regulation of DNA binding" evidence=IEA

GO:0032212 "positive regulation of telomere maintenance via telomerase" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000784 "nuclear chromosome, telomeric region" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

UNIPROTKB|O95271 TNKS "Tankyrase-1" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 5.9e-13, P = 5.9e-13
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query:    11 KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
             KSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct:  1258 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 1305

GO:0007067 "mitosis" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0051028 "mRNA transport" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0000922 "spindle pole" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IDA

GO:0000781 "chromosome, telomeric region" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0000209 "protein polyubiquitination" evidence=IDA

GO:0070213 "protein auto-ADP-ribosylation" evidence=IDA

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IDA

GO:0007052 "mitotic spindle organization" evidence=TAS

GO:0051225 "spindle assembly" evidence=TAS

GO:0000242 "pericentriolar material" evidence=TAS

GO:0005643 "nuclear pore" evidence=TAS

GO:0031965 "nuclear membrane" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0070212 "protein poly-ADP-ribosylation" evidence=IDA

GO:0006471 "protein ADP-ribosylation" evidence=IDA

GO:0032210 "regulation of telomere maintenance via telomerase" evidence=IC

GO:0043392 "negative regulation of DNA binding" evidence=IDA

GO:0032212 "positive regulation of telomere maintenance via telomerase" evidence=IMP;IDA

GO:0000784 "nuclear chromosome, telomeric region" evidence=IDA

GO:0070198 "protein localization to chromosome, telomeric region" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O95271	TNKS1_HUMAN	2, ., 4, ., 2, ., 3, 0	0.7083	0.6575	0.0361	yes	N/A
Q6PFX9	TNKS1_MOUSE	2, ., 4, ., 2, ., 3, 0	0.7083	0.6575	0.0363	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	73
cd01438	223	cd01438, tankyrase_like, Tankyrases interact with	3e-22

>gnl|CDD|238718 cd01438, tankyrase_like, Tankyrases interact with the telomere reverse transcriptase complex (TERT)

 Score = 84.6 bits (209), Expect = 3e-22
 Identities = 35/48 (72%), Positives = 40/48 (83%)

Query: 11  KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
           KSFLQF+A+KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct: 168 KSFLQFSAMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 215

Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin repeats that mediate protein-protein interaction (binding TRF1 and insulin-responsive aminopeptidase) and may function as a complex. Overexpression of Tank1 promotes increased telomere length when overexpressed, while overexpressed Tank2 has been shown to promote PARP cleavage- independent cell death (necrosis). Length = 223

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	73
cd01438	223	tankyrase_like Tankyrases interact with the telome	99.93
PF00644	206	PARP: Poly(ADP-ribose) polymerase catalytic domain	99.75
cd01439	121	TCCD_inducible_PARP_like Poly(ADP-ribose) polymera	99.63
cd01437	347	parp_like Poly(ADP-ribose) polymerase (parp) catal	99.55
PLN03124	643	poly [ADP-ribose] polymerase; Provisional	99.1
PLN03123	981	poly [ADP-ribose] polymerase; Provisional	99.04
cd01341	137	ADP_ribosyl ADP_ribosylating enzymes catalyze the	98.69
PLN03122	815	Poly [ADP-ribose] polymerase; Provisional	98.33
KOG4177|consensus	1143		95.61
KOG1037|consensus	531		94.84

>cd01438 tankyrase_like Tankyrases interact with the telomere reverse transcriptase complex (TERT)

Probab=99.93  E-value=1.3e-26  Score=170.18  Aligned_cols=66  Identities=53%  Similarity=0.893  Sum_probs=63.6

Q ss_pred             CeEEeeeecCCeeeEeecccccCCCCCCceeeeccCCCCCCcceEEEeeCcccceeEEEEeeecCC
Q psy8899           1 MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLRL   66 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~~~~~pPpGyhSViG~p~~ggLnY~E~VVY~~eqi~P~yLI~Y~~~~~   66 (73)
                      .||||||++|+++.+.+++.+++||+|||||+|.|+.++++|+|||||+++||||+|||+|+++||
T Consensus       158 ~MfLcrVlLGk~~~~~~~~~~~~~P~G~dSv~g~Ps~~~~~~~EfVVyd~~Q~YPeYLI~y~~~~~  223 (223)
T cd01438         158 QMLFCRVTLGKSFLQFSAMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYLITYQIVKP  223 (223)
T ss_pred             eEEEEEEEecceeeccCCcccCCCCCCCcceEcCCCCCCcccCEEEEECCCcEeeEEEEEEEeeCC
Confidence            389999999999988899999999999999999999999999999999999999999999999998

Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin repeats that mediate protein-protein interaction (binding TRF1 and insulin-responsive aminopeptidase) and may function as a complex. Overexpression of Tank1 promotes increased telomere length when overexpressed, while overexpressed Tank2 has been shown to promote PARP cleavage- independent cell death (necrosis).

>PF00644 PARP: Poly(ADP-ribose) polymerase catalytic domain; InterPro: IPR012317 Poly(ADP-ribose) polymerases (PARP) are a family of enzymes present in eukaryotes, which catalyze the poly(ADP-ribosyl)ation of a limited number of proteins involved in chromatin architecture, DNA repair, or in DNA metabolism, including PARP itself

Probab=99.75  E-value=1.2e-18  Score=120.81  Aligned_cols=62  Identities=32%  Similarity=0.423  Sum_probs=52.5

Q ss_pred             eEEeeeecCCeeeEeecccccCCCCCCceeeecc--------------CC---------CCCCcceEEEeeCcccceeEE
Q psy8899           2 FVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRP--------------SS---------GGLYFPEYVVYRGEQMCISYL   58 (73)
Q Consensus         2 ~llcrV~vGr~~~~~~~~~~~~pPpGyhSViG~p--------------~~---------ggLnY~E~VVY~~eqi~P~yL   58 (73)
                      ||||||++|+++..+.+..+..||+|+|||.|..              ++         +.++++|||||+++|+||+||
T Consensus       122 ~llc~V~lG~~~~~~~~~~~~~~~~g~~sv~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~eyVVy~~~q~~p~YL  201 (206)
T PF00644_consen  122 MLLCRVALGKPYELKNDNPMTSPPPGYDSVKGVGSKTPEDTIDEDGVPSGKGYVSEYDGSSLNPNEYVVYDNSQVYPEYL  201 (206)
T ss_dssp             EEEEEEEECSEEEESSCCTGSSGCTTESEEEECESEEEGGEEEETTETTSSEEESCEESSSSSCSEEEESSGGGEEEEEE
T ss_pred             eeEEEEEeccceeeccCcccccccCCcceecCCCccCCccccccCCCCCCCCccCccCCCccCCCEEEEEcccceeeEEE
Confidence            8999999999987765544888999999998753              22         229999999999999999999


Q ss_pred             EEeee
Q psy8899          59 AKNLY   63 (73)
Q Consensus        59 I~Y~~   63 (73)
                      |+|+.
T Consensus       202 i~y~~  206 (206)
T PF00644_consen  202 ITYKF  206 (206)
T ss_dssp             EEEEE
T ss_pred             EEEEC
Confidence            99973

PARP, also known as poly(ADP-ribose) synthetase and poly(ADP-ribose) transferase, transfers the ADP-ribose moiety from its substrate, nicotinamide adenine dinucleotide (NAD), to carboxylate groups of aspartic and glutamic residues. Whereas some PARPs might function in genome protection, others appear to play different roles in the cell, including telomere replication and cellular transport. PARP-1 is a multifunctional enzyme. The polypeptide has a highly conserved modular organisation consisting of an N-terminal DNA-binding domain, a central regulating segment, and a C-terminal or F region accommodating the catalytic centre. The F region is composed of two parts: a purely alpha-helical N- terminal domain (alpha-hd), and the mixed alpha/beta C-terminal catalytic domain bearing the putative NAD binding site. Although proteins of the PARP family are related through their PARP catalytic domain, they do not resemble each other outside of that region, but rather, they contain unique domains that distinguish them from each other and hint at their discrete functions. Domains with which the PARP catalytic domain is found associated include zinc fingers, SAP, ankyrin, BRCT, Macro, SAM, WWE and UIM domains [, , ]. The alpha-hd domain is about 130 amino acids in length and consists of an up-up-down-up-down-down motif of helices. It is thought to relay the activation signal issued on binding to damaged DNA [, ]. The PARP catalytic domain is about 230 residues in length. Its core consists of a five-stranded antiparallel beta-sheet and four-stranded mixed beta-sheet. The two sheets are consecutive and are connected via a single pair of hydrogen bonds between two strands that run at an angle of 90 degrees. These central beta-sheets are surrounded by five alpha-helices, three 3(10)-helices, and by a three- and a two-stranded beta-sheet in a 37-residue excursion between two central beta-strands [, ]. The active site, known as the 'PARP signature' is formed by a block of 50 amino acids that is strictly conserved among the vertebrates and highly conserved among all species. The 'PARP signature' is characteristic of all PARP protein family members. It is formed by a segment of conserved amino acid residues formed by a beta-sheet, an alpha-helix, a 3(10)-helix, a beta-sheet, and an alpha-helix [].; GO: 0003950 NAD+ ADP-ribosyltransferase activity; PDB: 2PQF_F 4F0D_A 1PAX_A 1EFY_A 1A26_A 2PAW_A 4PAX_A 3PAX_A 2PAX_A 3P0N_A ....

>cd01439 TCCD_inducible_PARP_like Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA

Probab=99.63  E-value=5.5e-16  Score=103.04  Aligned_cols=54  Identities=15%  Similarity=0.095  Sum_probs=42.5

Q ss_pred             eEEeeeecCCeeeEeecccccCCC--------CCCceeeeccCCCCCCcceEEEeeCcccceeEEEEe
Q psy8899           2 FVLGTANHSKSFLQFNAIKMAHAP--------PGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKN   61 (73)
Q Consensus         2 ~llcrV~vGr~~~~~~~~~~~~pP--------pGyhSViG~p~~ggLnY~E~VVY~~eqi~P~yLI~Y   61 (73)
                      ||||||++|+.. +-+ ..+..||        .+||||++..    .|..|+|||++.||||||||+|
T Consensus        60 mfL~rVl~G~~~-~~~-~~~~~pP~~~~~~~~~~yDS~vd~~----~~p~~~Vvf~~~q~yPeYlI~y  121 (121)
T cd01439          60 MFLARVLTGDYT-QGH-PGYRRPPLKPSGVELDRYDSCVDNV----SNPSIFVIFSDVQAYPEYLITY  121 (121)
T ss_pred             EEEEEEEeccee-cCC-CcccCCCCccCCCCCCCccceeCCC----CCCCEEEEEeCCccceeEEEEC
Confidence            899999999953 221 2333454        6799999875    3458999999999999999997

Poly(ADP-ribose) polymerase is a regulatory component induced by DNA damage. The carboxyl-terminal region is the most highly conserved region of the protein. 2,3,7,8-Tetrachlorodibenzo-p-dioxin (TCDD) causes pleotropic effects in mammalian species through modulating gene expression. TCCD indicible PARP (TiPARP) is a target of TCDD that may contribute to multiple responses to TCDD by modulating protein function through poly ADP-ribosylation

>cd01437 parp_like Poly(ADP-ribose) polymerase (parp) catalytic domain catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA

Probab=99.55  E-value=4.1e-15  Score=114.00  Aligned_cols=61  Identities=34%  Similarity=0.436  Sum_probs=51.3

Q ss_pred             eEEeeeecCCeeeEeecccccC-CCCCCceeeec------cC-----------------------CCCCCcceEEEeeCc
Q psy8899           2 FVLGTANHSKSFLQFNAIKMAH-APPGHHSVMGR------PS-----------------------SGGLYFPEYVVYRGE   51 (73)
Q Consensus         2 ~llcrV~vGr~~~~~~~~~~~~-pPpGyhSViG~------p~-----------------------~ggLnY~E~VVY~~e   51 (73)
                      ||||||++|+++..+++...+. ||.|||||.|.      |+                       ++.|.|+|||||+.+
T Consensus       257 mlLc~V~lG~~~~~~~~~~~~~~~p~g~~Sv~g~G~~~p~~~~~~~~~~gv~vP~G~~~~~~~~~~~~l~~nEyiVYd~~  336 (347)
T cd01437         257 LLLCEVALGKMNELKKADYMAKELPKGKHSVKGLGKTAPDPSEFEIDLDGVVVPLGKPVPSGHKTDTSLLYNEYIVYDVA  336 (347)
T ss_pred             EEEEEEecCceehhccCChhhccCCCCceeeEeccCCCCCchhheeccCCeEeeCCccccCCcCCCcccccCCeEeechh
Confidence            7999999999998776665554 99999999876      11                       346999999999999


Q ss_pred             ccceeEEEEee
Q psy8899          52 QMCISYLAKNL   62 (73)
Q Consensus        52 qi~P~yLI~Y~   62 (73)
                      ||++.|||..+
T Consensus       337 Qir~rYLv~vk  347 (347)
T cd01437         337 QVRLKYLLEVK  347 (347)
T ss_pred             HEEEEEEEEeC
Confidence            99999999753

Poly(ADP-ribose) polymerase is a regulatory component induced by DNA damage. The carboxyl-terminal region is the most highly conserved region of the protein. Experiments have shown that a carboxyl 40 kDa fragment is still catalytically active. Poly(ADP-ribose)-like polymerases (PARPS 1-3, VPARP, tankyrase) catalyze the addition of up to 100 ADP_ribose units from NAD+. PARPs 1 and 2 are localized in the nucleaus, bind DNA, and are activated by DNA damage. VPARP is part of the vault ribonucleoprotein complex. Tankyrases regulates telomere length through interactions with telomere repeat binding factor 1.

>PLN03124 poly [ADP-ribose] polymerase; Provisional

Probab=99.10  E-value=1.3e-10  Score=96.03  Aligned_cols=63  Identities=27%  Similarity=0.440  Sum_probs=50.0

Q ss_pred             CeEEeeeecCCeeeEeecccc-cCCCCCCceeeec----c------------------------CCCCCCcceEEEeeCc
Q psy8899           1 MFVLGTANHSKSFLQFNAIKM-AHAPPGHHSVMGR----P------------------------SSGGLYFPEYVVYRGE   51 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~~~-~~pPpGyhSViG~----p------------------------~~ggLnY~E~VVY~~e   51 (73)
                      .||||.|++|++...+++.-+ ..+|+|+|||.|.    |                        ..+.|.|+|||||+..
T Consensus       547 ~llLceVaLG~~~el~~~~y~a~~~p~G~~S~kG~G~~~Pdp~~~~~~~dGV~VP~Gk~~~~~~~~~~L~yNEYIVYd~~  626 (643)
T PLN03124        547 VLLLCEVALGDMNELLQADYNANKLPPGKLSTKGVGRTVPDPSEAKTLEDGVVVPLGKPVESPYSKGSLEYNEYIVYNVD  626 (643)
T ss_pred             EEEEEEEecCCcchhccCccccccCCCCceeEEeccCCCCCcccceecCCCeEeeCCccccCCCCCCccccCceEEechh
Confidence            389999999998876666554 5689999999542    1                        1246899999999999


Q ss_pred             ccceeEEEEeee
Q psy8899          52 QMCISYLAKNLY   63 (73)
Q Consensus        52 qi~P~yLI~Y~~   63 (73)
                      ||+..||+.-+.
T Consensus       627 Qvr~rYLv~vkf  638 (643)
T PLN03124        627 QIRMRYVLQVKF  638 (643)
T ss_pred             HeEEEEEEEEEE
Confidence            999999986543

>PLN03123 poly [ADP-ribose] polymerase; Provisional

Probab=99.04  E-value=2.5e-10  Score=97.58  Aligned_cols=61  Identities=28%  Similarity=0.462  Sum_probs=51.8

Q ss_pred             eEEeeeecCCeeeEeecccccCCCCCCceeeec----cC------------------------CCCCCcceEEEeeCccc
Q psy8899           2 FVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGR----PS------------------------SGGLYFPEYVVYRGEQM   53 (73)
Q Consensus         2 ~llcrV~vGr~~~~~~~~~~~~pPpGyhSViG~----p~------------------------~ggLnY~E~VVY~~eqi   53 (73)
                      ||||.|+||+++..+++..++.||.|||||.|.    |.                        .+.|.|.|||||+..|+
T Consensus       888 llLceVaLG~~~e~~~~~~~~~~p~g~~S~~g~G~~~Pd~~~~~~~~dgv~vP~Gk~~~~~~~~~~L~yNEYIVYd~~Qv  967 (981)
T PLN03123        888 MLLSEVALGEIYELKKAKYMDKPPRGKHSTKGLGKTVPQESEFVKWRDDVVVPCGKPVPSKVKASELMYNEYIVYNTAQV  967 (981)
T ss_pred             EEEEEEecCChhhhccccccccCCCCceeeeecCCCCCCcccceecCCceEeeCCCCccCcccCCccccCceEEechhHE
Confidence            899999999998777777788999999999554    21                        23589999999999999


Q ss_pred             ceeEEEEee
Q psy8899          54 CISYLAKNL   62 (73)
Q Consensus        54 ~P~yLI~Y~   62 (73)
                      +-.||+.-+
T Consensus       968 r~rYLv~vk  976 (981)
T PLN03123        968 KLQFLLKVR  976 (981)
T ss_pred             EEEEEEEEE
Confidence            999999654

>cd01341 ADP_ribosyl ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates

Probab=98.69  E-value=2.3e-08  Score=67.22  Aligned_cols=54  Identities=19%  Similarity=0.171  Sum_probs=39.0

Q ss_pred             EeeeecCCeeeEeec-ccccCCCCCCceeeeccC---CCCCCcceEEEeeC-cccceeE
Q psy8899           4 LGTANHSKSFLQFNA-IKMAHAPPGHHSVMGRPS---SGGLYFPEYVVYRG-EQMCISY   57 (73)
Q Consensus         4 lcrV~vGr~~~~~~~-~~~~~pPpGyhSViG~p~---~ggLnY~E~VVY~~-eqi~P~y   57 (73)
                      +|.|..|+....+.. ..+..+|+|+|||.|..+   ...+++.|+|||+. +|++|+|
T Consensus        79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~e~VV~~~~~Qv~~~Y  137 (137)
T cd01341          79 LGVMSGATEESSRVLFPRNFRGATGAEVVDLLVAMCRDALLLPREYIIFEPYSQVSIRY  137 (137)
T ss_pred             EEEeccccccccccccccccCCCCCCeEEEcccccccchhhCCCeEEEecchhhceecC
Confidence            344444444322222 345567999999999975   46799999999999 9999997

Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. Poly(ADP-ribose) polymerases (PARPS 1-3, VPARP, tankyrase) catalyze the addition of up to 100 ADP_ribose units from NAD+. PARPs 1 and 2 are localized in the nucleaus, bind DNA, and are activated by DNA damage. VPARP is part of the vault ribonucleoprotein complex. Tankyrases regulates telomere length in part through poy(ADP_ribosylation) of telomere repeat binding factor 1 (TRF1). Poly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component induced by DNA damage. The carboxyl-terminal region is the most highly conserved region o

>PLN03122 Poly [ADP-ribose] polymerase; Provisional

Probab=98.33  E-value=2.8e-07  Score=77.99  Aligned_cols=62  Identities=24%  Similarity=0.363  Sum_probs=47.0

Q ss_pred             eEEeeeecCCe-eeEeecc-cccCCCCCCcee--eec--cC------------------------CCCCCcceEEEeeCc
Q psy8899           2 FVLGTANHSKS-FLQFNAI-KMAHAPPGHHSV--MGR--PS------------------------SGGLYFPEYVVYRGE   51 (73)
Q Consensus         2 ~llcrV~vGr~-~~~~~~~-~~~~pPpGyhSV--iG~--p~------------------------~ggLnY~E~VVY~~e   51 (73)
                      ||||-|+||++ ...+++. .....|.|.||+  +|+  |.                        .+.|.|.||||||-.
T Consensus       713 LlLcEVALG~~~~el~~~~~~~~~~~~g~~Stkg~G~~~Pdp~~~~~~~dgV~VP~Gk~~~~~~~~~~L~yNEYIVYDva  792 (815)
T PLN03122        713 LVLAVASLGDEVLELTKPPEDVKSYEEKKVGVKGLGRKKTDESEHFKWRDDITVPCGRLIPSEHKDSPLEYNEYAVYDPK  792 (815)
T ss_pred             EEEEHhhcCchHHHhhcCchhhhccCCCCceeeecCCCcCCCccceecCCCeEEeCCCCccCCCCCcccccCceEEEchh
Confidence            79999999998 4444443 455678899998  333  31                        235999999999999


Q ss_pred             ccceeEEEEeee
Q psy8899          52 QMCISYLAKNLY   63 (73)
Q Consensus        52 qi~P~yLI~Y~~   63 (73)
                      ||+-.||+.=+.
T Consensus       793 QvrirYL~~vkf  804 (815)
T PLN03122        793 QVSIRFLVGVKY  804 (815)
T ss_pred             HEEEEEEEEEEe
Confidence            999999986443

>KOG4177|consensus

Probab=95.61  E-value=0.0033  Score=55.63  Aligned_cols=42  Identities=29%  Similarity=0.400  Sum_probs=37.0

Q ss_pred             eEEeeeecCCeeeEeecccccCCCCCCceeeeccCCCCCCcceEEEee
Q psy8899           2 FVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYR   49 (73)
Q Consensus         2 ~llcrV~vGr~~~~~~~~~~~~pPpGyhSViG~p~~ggLnY~E~VVY~   49 (73)
                      +++|+|.+++++.+++.+++ ++  |+||++++|+.+   ++|.++|+
T Consensus      1102 l~~~~~~~~~~~l~~~~~~~-~~--g~~~~~~~~~~~---~~~~~~~~ 1143 (1143)
T KOG4177|consen 1102 LSFCFVPFLENRLAFSVKKR-HA--GRISFMAEPKSK---IPQHVICH 1143 (1143)
T ss_pred             eEEeeehhhhhhhHHHHHhh-cC--Ccceeecccccc---CCccccCC
Confidence            57899999999999999988 44  999999999886   88888874

>KOG1037|consensus

Probab=94.84  E-value=0.0045  Score=50.49  Aligned_cols=60  Identities=32%  Similarity=0.479  Sum_probs=46.3

Q ss_pred             CeEEeeeecCCeeeEeec-ccccCCCCCCceee-----------------------ec------c-CCCCCCcceEEEee
Q psy8899           1 MFVLGTANHSKSFLQFNA-IKMAHAPPGHHSVM-----------------------GR------P-SSGGLYFPEYVVYR   49 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~-~~~~~pPpGyhSVi-----------------------G~------p-~~ggLnY~E~VVY~   49 (73)
                      ++|+|-|++|+.....++ ..++..|+|+|||.                       |.      + +.+.+.|+|++||+
T Consensus       428 ~ll~~~~alg~~~~~~~~~~~~~~~~~~~~sv~~~g~~~p~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~l~y~e~~v~~  507 (531)
T KOG1037|consen  428 HLLLCDVALGKEQDLVESIPSLTELPAGKDSVKGVGKTAPDSTLSEDLEDDVDVPLGKIKLTEEPHKDSLLEYNEYIVYN  507 (531)
T ss_pred             hhhhhhhhccchhhhhcCCcccccCCCCCcchhhhcccCCCchhhcccccccccccccccccccccchhhhhhhhhhhcc
Confidence            478999999999876544 45666899999974                       21      1 22357899999999


Q ss_pred             CcccceeEEEE
Q psy8899          50 GEQMCISYLAK   60 (73)
Q Consensus        50 ~eqi~P~yLI~   60 (73)
                      .+|+-=.|++.
T Consensus       508 ~~q~~~~~~~k  518 (531)
T KOG1037|consen  508 VEQVQIRYLVK  518 (531)
T ss_pred             HhhhceeeeeE
Confidence            99998888764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	73
3udd_A	224	Tankyrase-1 In Complex With Small Molecule Inhibito		4e-15
2rf5_A	258	Crystal Structure Of Human Tankyrase 1- Catalytic P		4e-15
4dvi_A	217	Crystal Structure Of Tankyrase 1 With Iwr2 Length =		1e-14
3kr7_A	240	Human Tankyrase 2 - Catalytic Parp Domain Length =		2e-14
3mhk_A	223	Human Tankyrase 2 - Catalytic Parp Domain In Comple		3e-14
4hki_C	49	Tankyrase 2 In Complex With Flavone Length = 49		7e-10

>pdb|3UDD|A Chain A, Tankyrase-1 In Complex With Small Molecule Inhibitor Length = 224

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 39/48 (81%)
Query: 11  KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
           KSFLQF+ IKMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct: 155 KSFLQFSTIKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 202

>pdb|2RF5|A Chain A, Crystal Structure Of Human Tankyrase 1- Catalytic Parp Domain Length = 258

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 39/48 (81%)
Query: 11  KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
           KSFLQF+ IKMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct: 191 KSFLQFSTIKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 238

>pdb|4DVI|A Chain A, Crystal Structure Of Tankyrase 1 With Iwr2 Length = 217

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/48 (70%), Positives = 39/48 (81%)
Query: 11  KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
           KSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ    YL
Sbjct: 155 KSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYL 202

>pdb|3KR7|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain Length = 240

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 40/55 (72%)
Query: 11  KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLR 65
           KSFLQF+A+KMAH+PPGHHSV GRPS  GL   EYV+YRGEQ    YL     +R
Sbjct: 183 KSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYLITYQIMR 237

>pdb|3MHK|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain In Complex With 2-(2- Pyridyl)-7,8-Dihydro-5h-Thiino[4,3-D]pyrimidin-4-Ol Length = 223

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 40/55 (72%)
Query: 11  KSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLR 65
           KSFLQF+A+KMAH+PPGHHSV GRPS  GL   EYV+YRGEQ    YL     +R
Sbjct: 155 KSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYLITYQIMR 209

>pdb|4HKI|C Chain C, Tankyrase 2 In Complex With Flavone Length = 49

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 32/48 (66%)
Query: 20 KMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLRLD 67
          KMAH+PPGHHSV GRPS  GL   EYV+YRGEQ    YL     +R +
Sbjct: 1  KMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYLITYQIMRPE 48

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	73
3u9h_A	240	Tankyrase-2; protein-ligand complex, diphtheria to	4e-11
4f0d_A	277	PARP-16, poly [ADP-ribose] polymerase 16; transfer	3e-04
4dqy_C	506	Poly [ADP-ribose] polymerase 1; PARP, poly(ADP-rib	3e-04
3blj_A	221	Poly(ADP-ribose) polymerase 15; PARP, BAL-3, SGC,	6e-04
1efy_A	350	Poly (ADP-ribose) polymerase; benzimidazole, inhib	6e-04
3smj_A	193	Poly [ADP-ribose] polymerase 14; diphtheria toxin	7e-04

>3u9h_A Tankyrase-2; protein-ligand complex, diphtheria toxin like fold, transfer ribosylation; HET: SO4; 1.75A {Homo sapiens} PDB: 3kr8_A* 3kr7_A* 3p0n_A* 3p0p_A* 3p0q_A* 3mhj_A* 3u9y_A* 3ua9_A* 4avu_A* 4avw_A* 3mhk_A* 2rf5_A 3udd_A* 3uh2_A* 3uh4_A* 4dvi_A* Length = 240

 Score = 54.7 bits (131), Expect = 4e-11
 Identities = 34/58 (58%), Positives = 39/58 (67%)

Query: 1   MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
             +       KSFLQF+A+KMAH+PPGHHSV GRPS  GL   EYV+YRGEQ    YL
Sbjct: 173 QLLFCRVTLGKSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYL 230

>4f0d_A PARP-16, poly [ADP-ribose] polymerase 16; transferase, ARTD15, structural genomics structural genomics consortium, SGC; HET: 3AB; 2.70A {Homo sapiens} Length = 277

 Score = 36.0 bits (82), Expect = 3e-04
 Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 1/52 (1%)

Query: 7   ANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            +H     Q    K +       + +     G +    +VV   + + + YL
Sbjct: 216 IDHPDVKCQ-TKKKDSKEIDRRRARIKHSEGGDIPPKYFVVTNNQLLRVKYL 266

>4dqy_C Poly [ADP-ribose] polymerase 1; PARP, poly(ADP-ribose) polymerase, DNA binding protein, ADP- transferase, PARP-like zinc finger, poly(ADP-ribosyl)ation; HET: DNA; 3.25A {Homo sapiens} PDB: 2cr9_A Length = 506

 Score = 36.0 bits (82), Expect = 3e-04
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 27/75 (36%)

Query: 11  KSFLQFNAIKMAHAPPGHHSVMGR---------------------------PSSGGLYFP 43
             +   +A  ++  P G HSV G                             +   L + 
Sbjct: 412 NMYELKHASHISKLPKGKHSVKGLGKTTPDPSANISLDGVDVPLGTGISSGVNDTSLLYN 471

Query: 44  EYVVYRGEQMCISYL 58
           EY+VY   Q+ + YL
Sbjct: 472 EYIVYDIAQVNLKYL 486

>3blj_A Poly(ADP-ribose) polymerase 15; PARP, BAL-3, SGC, structural GE consortium, glycosyltransferase, NAD, nucleus; 2.20A {Homo sapiens} PDB: 3gey_A* Length = 221

 Score = 35.0 bits (80), Expect = 6e-04
 Identities = 13/58 (22%), Positives = 18/58 (31%), Gaps = 5/58 (8%)

Query: 2   FVLGTANHSKSFLQFNAIKMAHAPP-GHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            + G     ++ L     K  H P     SV     S       +VV+   Q    YL
Sbjct: 163 VLTGVFTKGRAGLVTPPPKNPHNPTDLFDSVTNNTRSPK----LFVVFFDNQAYPEYL 216

>1efy_A Poly (ADP-ribose) polymerase; benzimidazole, inhibitor, catalytic fragment, transferase; HET: BZC; 2.20A {Gallus gallus} SCOP: a.41.1.1 d.166.1.2 PDB: 1a26_A* 1pax_A* 2paw_A 2pax_A* 3pax_A* 4pax_A* 2rcw_A* 1uk1_A* 1wok_A* 1uk0_A* 2rd6_A* 3gjw_A* 3gn7_A* 3l3l_A* 3l3m_A* Length = 350

 Score = 35.1 bits (80), Expect = 6e-04
 Identities = 17/77 (22%), Positives = 24/77 (31%), Gaps = 27/77 (35%)

Query: 11  KSFLQFNAIKMAHAPPGHHSVMGRP---------------------------SSGGLYFP 43
             +   NA  +   P G HSV G                             +   L + 
Sbjct: 267 NMYELKNASHITKLPKGKHSVKGLGKTAPDPTATTTLDGVEVPLGNGISTGINDTCLLYN 326

Query: 44  EYVVYRGEQMCISYLAK 60
           EY+VY   Q+ + YL K
Sbjct: 327 EYIVYDVAQVNLKYLLK 343

>3smj_A Poly [ADP-ribose] polymerase 14; diphtheria toxin like fold, transferase, NAD+, ADP-ribosylat transferase-transferase inhibitor complex; HET: FDR; 1.50A {Homo sapiens} PDB: 3goy_A* 3smi_A* 3se2_A* Length = 193

 Score = 35.0 bits (80), Expect = 7e-04
 Identities = 10/58 (17%), Positives = 15/58 (25%), Gaps = 5/58 (8%)

Query: 2   FVLGTANHSKSFLQFNAIKMAHAPP-GHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            + G   H    L     K    P   + +V             +V +   Q    YL
Sbjct: 135 VLTGIYTHGNHSLIVPPSKNPQNPTDLYDTVTDNVHHPS----LFVAFYDYQAYPEYL 188

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	73
3u9h_A	240	Tankyrase-2; protein-ligand complex, diphtheria to	99.92
2x5y_A	173	Zinc finger CCCH-type antiviral protein 1; antivir	99.75
1efy_A	350	Poly (ADP-ribose) polymerase; benzimidazole, inhib	99.75
3hkv_A	217	PARP-10, poly [ADP-ribose] polymerase 10; NAD, tra	99.72
3smj_A	193	Poly [ADP-ribose] polymerase 14; diphtheria toxin	99.71
2pqf_A	198	Poly [ADP-ribose] polymerase 12; enzyme-inhibitor	99.7
4dqy_C	506	Poly [ADP-ribose] polymerase 1; PARP, poly(ADP-rib	99.69
3kjd_A	368	Poly [ADP-ribose] polymerase 2; transferase, enzym	99.69
3blj_A	221	Poly(ADP-ribose) polymerase 15; PARP, BAL-3, SGC,	99.68
3c4h_A	357	Poly(ADP-ribose) polymerase 3; enzyme-inhibitor co	99.67

>3u9h_A Tankyrase-2; protein-ligand complex, diphtheria toxin like fold, transfer ribosylation; HET: SO4; 1.75A {Homo sapiens} PDB: 3kr8_A* 3kr7_A* 3p0n_A* 3p0p_A* 3p0q_A* 3mhj_A* 3u9y_A* 3ua9_A* 4avu_A* 4avw_A* 3mhk_A* 2rf5_A 3udd_A* 3uh2_A* 3uh4_A* 4dvi_A* 4hlh_A* 4hki_A* 4hkn_A* 4hl5_A* ...

Probab=99.92  E-value=1.8e-25  Score=161.52  Aligned_cols=66  Identities=53%  Similarity=0.891  Sum_probs=61.7

Q ss_pred             eEEeeeecCCeeeEeecccccCCCCCCceeeeccCCCCCCcceEEEeeCcccceeEEEEeeecCCc
Q psy8899           2 FVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLRLD   67 (73)
Q Consensus         2 ~llcrV~vGr~~~~~~~~~~~~pPpGyhSViG~p~~ggLnY~E~VVY~~eqi~P~yLI~Y~~~~~~   67 (73)
                      ||||||++|+.++.++++.++.||+|||||+|.|+.++|+|+|+|||+++||+|+|||+|++.+|+
T Consensus       174 mlLc~V~lG~~~~~~~~~~~~~pP~gyDSvvg~~~~~~l~~~E~VVy~~~qi~P~YlI~y~~~~~~  239 (240)
T 3u9h_A          174 LLFCRVTLGKSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYLITYQIMRPE  239 (240)
T ss_dssp             EEEEEEECCSEEEEEECC--CCCCTTCSEEEEEESSCTTCCCEEEESCGGGEEEEEEEEEEECCCC
T ss_pred             EEEEEEecCceEeecCcccccCCCCCCCceecCCCCCCCCCCEEEEEcccceeEEEEEEEEccCCC
Confidence            899999999999988888888999999999999998889999999999999999999999999997

>2x5y_A Zinc finger CCCH-type antiviral protein 1; antiviral defense, immune system, transferase; 1.05A {Homo sapiens}

Probab=99.75  E-value=1.8e-18  Score=117.93  Aligned_cols=57  Identities=16%  Similarity=0.262  Sum_probs=48.3

Q ss_pred             CeEEeeeecCCeeeEeecccccCCCCCCceeeeccCCCCCCcceEEEeeCcccceeEEEEeee
Q psy8899           1 MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLY   63 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~~~~~pPpGyhSViG~p~~ggLnY~E~VVY~~eqi~P~yLI~Y~~   63 (73)
                      .||||||++|+ + ...+..+..||+|||||+|..    .|++|+|||+++||+|+|||+|+.
T Consensus       116 ~m~lc~V~~G~-~-~~~~~~~~~pp~~ydSv~~~~----~~~~e~VV~~~~q~~P~YlI~y~~  172 (173)
T 2x5y_A          116 VMFVAQVLVGK-F-IEGNITYTSPPPQFDSCVDTR----SNPSVFVIFQKDQVYPQYVIEYTE  172 (173)
T ss_dssp             EEEEEEECCCS-E-EECCTTCSSCCTTCCEEESCS----SSCCEEEECCGGGEEEEEEEEEEE
T ss_pred             EEEEEEEecCc-c-ccCCcccCCCCCCCCceECCC----CCCCEEEEEeCCeEeEEEEEEEeC
Confidence            38999999999 3 233446788999999999874    478999999999999999999974

>1efy_A Poly (ADP-ribose) polymerase; benzimidazole, inhibitor, catalytic fragment, transferase; HET: BZC; 2.20A {Gallus gallus} SCOP: a.41.1.1 d.166.1.2 PDB: 1a26_A* 1pax_A* 2paw_A 2pax_A* 3pax_A* 4pax_A* 2rcw_A* 1uk1_A* 1wok_A* 1uk0_A* 2rd6_A* 3gjw_A* 3gn7_A* 3l3l_A* 3l3m_A*

Probab=99.75  E-value=2e-18  Score=130.04  Aligned_cols=62  Identities=32%  Similarity=0.539  Sum_probs=53.9

Q ss_pred             eEEeeeecCCeeeEeecccccCCCCCCceeeec----c-----------------------CCCCCCcceEEEeeCcccc
Q psy8899           2 FVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGR----P-----------------------SSGGLYFPEYVVYRGEQMC   54 (73)
Q Consensus         2 ~llcrV~vGr~~~~~~~~~~~~pPpGyhSViG~----p-----------------------~~ggLnY~E~VVY~~eqi~   54 (73)
                      ||||||++|+.+..+++..+..||+|||||.|.    |                       ..+.|+|+|||||+.+||+
T Consensus       258 m~Lc~V~lG~~~~~~~~~~~~~~p~g~~Sv~g~g~~~Pd~~~~~~~dgv~vP~G~~~~~~~~~~~l~~~EyVVYd~~Qi~  337 (350)
T 1efy_A          258 ILLGEVALGNMYELKNASHITKLPKGKHSVKGLGKTAPDPTATTTLDGVEVPLGNGISTGINDTCLLYNEYIVYDVAQVN  337 (350)
T ss_dssp             EEEEEEECCSEEEESSCCCCCSCCTTCCEEEECCSEEECGGGCEEETTEEECCSCEEECSCCSSSCSBCEEEESCGGGEE
T ss_pred             EEEEEEecCCceeccCcchhhhcCCCCcceeeccccCCCccccccCCCeeeecCcccCCCCCCCCCCCCEEEEEchhhee
Confidence            799999999999877666677899999999876    2                       1256999999999999999


Q ss_pred             eeEEEEeee
Q psy8899          55 ISYLAKNLY   63 (73)
Q Consensus        55 P~yLI~Y~~   63 (73)
                      |+|||.|+.
T Consensus       338 p~YLI~~~~  346 (350)
T 1efy_A          338 LKYLLKLKF  346 (350)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEEE
Confidence            999999986

>3hkv_A PARP-10, poly [ADP-ribose] polymerase 10; NAD, transferase, structural genomics, structural genomics consortium, SGC, cytoplasm, glycosyltransferase; HET: 3AB; 2.10A {Homo sapiens}

Probab=99.72  E-value=8.9e-18  Score=120.17  Aligned_cols=62  Identities=10%  Similarity=-0.034  Sum_probs=49.3

Q ss_pred             CeEEeeeecCCeeeEeecccccCCCC--------CCceeeeccCCCCCCcceEEEeeCcccceeEEEEeeecCCcc
Q psy8899           1 MFVLGTANHSKSFLQFNAIKMAHAPP--------GHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLRLDK   68 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~~~~~pPp--------GyhSViG~p~~ggLnY~E~VVY~~eqi~P~yLI~Y~~~~~~~   68 (73)
                      .||||||++|+..+  ....+..||+        +||||+|.+    .|++|+|||+++||||+|||+|+..+..+
T Consensus       135 ~m~lcrVl~G~~~~--g~~~~~~PP~~~~~~~~~~yDSvvd~~----~np~~~VVf~~~qiyPeYLI~y~~~~~~~  204 (217)
T 3hkv_A          135 AVFVARVLTGDYGQ--GRRGLRAPPLRGPGHVLLRYDSAMDCI----CQPSIFVIFHDTQALPTHLITCEHVPRAS  204 (217)
T ss_dssp             EEEEEEEECCSEEE--CCTTCSSSCBCCTTCSSSBCSEEESCS----SSCCEEEECCTTSEEEEEEEEEEECC---
T ss_pred             EEEEEEEEcccccc--CCCccCCCCCCccCCCCCceeEEECCC----CCCCEEEEEcCCcCceeEEEEEecCCCCC
Confidence            38999999999542  3345666776        499999987    47899999999999999999999886544

>3smj_A Poly [ADP-ribose] polymerase 14; diphtheria toxin like fold, transferase, NAD+, ADP-ribosylat transferase-transferase inhibitor complex; HET: FDR; 1.50A {Homo sapiens} PDB: 3goy_A* 3smi_A* 3se2_A* 4f1l_A* 4f1q_A*

Probab=99.71  E-value=1.2e-17  Score=116.48  Aligned_cols=56  Identities=11%  Similarity=-0.046  Sum_probs=46.6

Q ss_pred             CeEEeeeecCCeeeEeecccccCCCC--------CCceeeeccCCCCCCcceEEEeeCcccceeEEEEee
Q psy8899           1 MFVLGTANHSKSFLQFNAIKMAHAPP--------GHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNL   62 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~~~~~pPp--------GyhSViG~p~~ggLnY~E~VVY~~eqi~P~yLI~Y~   62 (73)
                      .||||||++|+..+  ....+..||+        |||||+|.++    |.+|+|||+++||||+|||+|+
T Consensus       129 ~mllcrV~~G~~~~--g~~~~~~pP~~~~~~~~~~yDSvv~~~~----~p~~~VVf~~~qiyP~YlI~y~  192 (193)
T 3smj_A          129 HVYYVRVLTGIYTH--GNHSLIVPPSKNPQNPTDLYDTVTDNVH----HPSLFVAFYDYQAYPEYLITFR  192 (193)
T ss_dssp             EEEEEEEECCSEEE--CCSSCCSCCBSCTTSTTCBCSEEESCSS----SCSEEEECSTTCEEEEEEEEEE
T ss_pred             EEEEEEEEeccccc--CCCccCCCCCccCCCCCCCccceeCCCC----CCCEEEEEeCCceeeEEEEEEe
Confidence            38999999999763  3345666665        5999999875    5699999999999999999997

>2pqf_A Poly [ADP-ribose] polymerase 12; enzyme-inhibitor complex, catalytic fragment, structural GEN structural genomics consortium, SGC, transferase; HET: GAB CIT; 2.20A {Homo sapiens}

Probab=99.70  E-value=2.1e-17  Score=114.68  Aligned_cols=59  Identities=10%  Similarity=0.096  Sum_probs=48.5

Q ss_pred             CeEEeeeecCCeeeEeecccccCCCCC-------CceeeeccCCCCCCcceEEEeeCcccceeEEEEeeecC
Q psy8899           1 MFVLGTANHSKSFLQFNAIKMAHAPPG-------HHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNLYLR   65 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~~~~~pPpG-------yhSViG~p~~ggLnY~E~VVY~~eqi~P~yLI~Y~~~~   65 (73)
                      .||||||++|+...  ....+..|||+       ||||++.+    .+++|+|||+++||||+|||+|+...
T Consensus       130 ~m~lcrV~~G~~~~--~~~~~~~pp~~~~~~~~~yDSvv~~~----~~~~e~VVy~~~qiyP~YlI~y~~~~  195 (198)
T 2pqf_A          130 TMFLARVLVGEFVR--GNASFVRPPAKEGWSNAFYDSCVNSV----SDPSIFVIFEKHQVYPEYVIQYTTSS  195 (198)
T ss_dssp             EEEEEEEECCSEEE--CCTTCSSCCBCSCC--CBCSEEESCS----SSCCEEEESCGGGEEEEEEEEEESCC
T ss_pred             EEEEEEEecCCccc--CCccccCCCCCCCCCCCCcccCcCCC----CCCCEEEEECCCcEeeEEEEEEEcCC
Confidence            38999999999862  23345678776       99999875    36799999999999999999998754

>4dqy_C Poly [ADP-ribose] polymerase 1; PARP, poly(ADP-ribose) polymerase, DNA binding protein, ADP- transferase, PARP-like zinc finger, poly(ADP-ribosyl)ation; HET: DNA; 3.25A {Homo sapiens} PDB: 2cr9_A

Probab=99.69  E-value=2.5e-17  Score=129.88  Aligned_cols=63  Identities=29%  Similarity=0.488  Sum_probs=55.5

Q ss_pred             CeEEeeeecCCeeeEeecccccCCCCCCceeeeccC---------------------------CCCCCcceEEEeeCccc
Q psy8899           1 MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRPS---------------------------SGGLYFPEYVVYRGEQM   53 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~~~~~pPpGyhSViG~p~---------------------------~ggLnY~E~VVY~~eqi   53 (73)
                      .||||||++|+++..+++..++.||+|||||.|..+                           .+.|+|+|||||+.+||
T Consensus       402 ~mll~~V~lG~~~~~~~~~~~~~~p~G~dSv~g~g~~~P~p~~~~~~dGv~vP~G~~~~~~~~~~~l~ynEyiVYd~~Qi  481 (506)
T 4dqy_C          402 LILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSANISLDGVDVPLGTGISSGVNDTSLLYNEYIVYDIAQV  481 (506)
T ss_dssp             EEEEEEEECCSEEEESSCCCCSSCCTTCCEEEECCSEEECGGGCEESSSCEECCCCEEECSCCCCSCSBCEEEESSGGGE
T ss_pred             EEEEEEEecCCceecccchhhhccCCCCceEEeCCcCcCCcccccccCCeEEECCCcccCCCCCCcccccceEEEchHHe
Confidence            389999999999988877778899999999988821                           35699999999999999


Q ss_pred             ceeEEEEeee
Q psy8899          54 CISYLAKNLY   63 (73)
Q Consensus        54 ~P~yLI~Y~~   63 (73)
                      +|.|||..+.
T Consensus       482 r~rYLv~v~~  491 (506)
T 4dqy_C          482 NLKYLLKLKF  491 (506)
T ss_dssp             EEEEEEEEEC
T ss_pred             eEEEEEEEEE
Confidence            9999998775

>3kjd_A Poly [ADP-ribose] polymerase 2; transferase, enzyme-inhibitor complex, catalytic fragment, S genomics, structural genomics consortium, SGC; HET: 78P; 1.95A {Homo sapiens} PDB: 3kcz_A* 1gs0_A

Probab=99.69  E-value=2.4e-17  Score=126.17  Aligned_cols=63  Identities=30%  Similarity=0.472  Sum_probs=53.6

Q ss_pred             CeEEeeeecCCeeeEeecc-cccCCCCCCceeeec----cC-------------------------CC-CCCcceEEEee
Q psy8899           1 MFVLGTANHSKSFLQFNAI-KMAHAPPGHHSVMGR----PS-------------------------SG-GLYFPEYVVYR   49 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~-~~~~pPpGyhSViG~----p~-------------------------~g-gLnY~E~VVY~   49 (73)
                      .||||||++|+++..+++. .++.||+|||||.|.    |+                         .| .|+|+|||||+
T Consensus       273 ~mlLc~V~lG~~~~~~~~~~~~~~pP~G~dSv~g~G~~~P~~~~~~~~dgv~vP~G~~~~~~~~~~~~~~L~ynEyIVYd  352 (368)
T 3kjd_A          273 LLLLSEVALGQCNELLEANPKAEGLLQGKHSTKGLGKMAPSSAHFVTLNGSTVPLGPASDTGILNPDGYTLNYNEYIVYN  352 (368)
T ss_dssp             EEEEEEEECCSEEEESSCCTTGGGGCTTCCEEEECEEEEECGGGCEEETTEEECCSCEEECCCCCSSSCCEEECEEEESS
T ss_pred             EEEEEEEecCCceeccccCcccccCCCCCceEEeeCCCcCCcccccccCCEEeeCCCcccCCCCCCcCccccCCceEEec
Confidence            3899999999999877654 578899999999988    32                         12 59999999999


Q ss_pred             CcccceeEEEEeee
Q psy8899          50 GEQMCISYLAKNLY   63 (73)
Q Consensus        50 ~eqi~P~yLI~Y~~   63 (73)
                      .+||+|.|||..+.
T Consensus       353 ~~Qir~rYLv~v~~  366 (368)
T 3kjd_A          353 PNQVRMRYLLKVQF  366 (368)
T ss_dssp             GGGEEEEEEEEEEE
T ss_pred             hhHeeEEEEEEEEe
Confidence            99999999998764

>3blj_A Poly(ADP-ribose) polymerase 15; PARP, BAL-3, SGC, structural GE consortium, glycosyltransferase, NAD, nucleus; 2.20A {Homo sapiens} PDB: 3gey_A*

Probab=99.68  E-value=5.2e-17  Score=114.93  Aligned_cols=56  Identities=16%  Similarity=0.055  Sum_probs=45.2

Q ss_pred             CeEEeeeecCCeeeEeecccccCCCC--------CCceeeeccCCCCCCcceEEEeeCcccceeEEEEee
Q psy8899           1 MFVLGTANHSKSFLQFNAIKMAHAPP--------GHHSVMGRPSSGGLYFPEYVVYRGEQMCISYLAKNL   62 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~~~~~pPp--------GyhSViG~p~~ggLnY~E~VVY~~eqi~P~yLI~Y~   62 (73)
                      .||||||++|+..+..  ..+..||+        |||||+|.+    .+++|+|||+++||||+|||+|+
T Consensus       157 ~mllcrV~~G~~~~g~--~~~~~pp~~~~~~~~~~yDSvv~~~----~~~~e~VVy~~~qiyP~YlI~y~  220 (221)
T 3blj_A          157 HMYVVRVLTGVFTKGR--AGLVTPPPKNPHNPTDLFDSVTNNT----RSPKLFVVFFDNQAYPEYLITFT  220 (221)
T ss_dssp             EEEEEEEECCSEEECC--TTCSSCCBSSTTSTTSBCSEEESCS----SSCSEEEECSTTSEEEEEEEEEE
T ss_pred             EEEEEEEEeCCccCCC--hhccCCCcccCCCCCCCCCccccCC----CCCCEEEEEcCCeEeeeEEEEEE
Confidence            3899999999986433  23334443        899999986    36899999999999999999996

>3c4h_A Poly(ADP-ribose) polymerase 3; enzyme-inhibitor complex, catalytic fragment, structural GEN structural genomics consortium, SGC; HET: DRL; 2.10A {Homo sapiens} PDB: 3c49_A* 2pa9_A* 3ce0_A* 3fhb_A*

Probab=99.67  E-value=6.9e-17  Score=121.71  Aligned_cols=62  Identities=26%  Similarity=0.449  Sum_probs=50.9

Q ss_pred             CeEEeeeecCCeeeEeeccc-ccCCCCCCceeeec----c----------C------------------CCCCCcceEEE
Q psy8899           1 MFVLGTANHSKSFLQFNAIK-MAHAPPGHHSVMGR----P----------S------------------SGGLYFPEYVV   47 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~~-~~~pPpGyhSViG~----p----------~------------------~ggLnY~E~VV   47 (73)
                      .||||||++|+.+..+.+.. +..||+|||||.|.    |          .                  .+.|+|+||||
T Consensus       263 ~mllc~V~lG~~~~~~~~~~~~~~pP~g~dSv~g~g~~~P~~~~~~~~~~dg~~v~vp~G~~v~~~~~~~~~l~~nEyVV  342 (357)
T 3c4h_A          263 YMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLI  342 (357)
T ss_dssp             EEEEEEEECCSEEEESSCCTTCSSCCTTCSEEEECCSEEECGGGCEEEEETTEEEEECCSCEEECGGGTTCSCSBCEEEE
T ss_pred             EEEEEEEecCCceeccCCchhccCCCCCCCccceecCCCCCcccceeeccCCCeEEecCCCcccCCCCCCCccCCCEEEE
Confidence            37999999999987665544 55689999999775    1          1                  13589999999


Q ss_pred             eeCcccceeEEEEee
Q psy8899          48 YRGEQMCISYLAKNL   62 (73)
Q Consensus        48 Y~~eqi~P~yLI~Y~   62 (73)
                      |+.+||+|+|||+|+
T Consensus       343 Yd~~Qv~p~YLi~~k  357 (357)
T 3c4h_A          343 YQESQCRLRYLLEVH  357 (357)
T ss_dssp             SSGGGEEEEEEEEEC
T ss_pred             EchhheeEEEEEEEC
Confidence            999999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	73
d1gs0a2	217	d.166.1.2 (A:341-557) Poly(ADP-ribose) polymerase,	0.003

>d1gs0a2 d.166.1.2 (A:341-557) Poly(ADP-ribose) polymerase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 217

class: Alpha and beta proteins (a+b)
fold: ADP-ribosylation
superfamily: ADP-ribosylation
family: Poly(ADP-ribose) polymerase, C-terminal domain
domain: Poly(ADP-ribose) polymerase, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.0 bits (72), Expect = 0.003
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 25  PPGHHSVMGRPSSGGLYFPEYVVYRGEQMCISYL 58
            P   + +  P    L + E++VY   Q+ + YL
Sbjct: 175 GPASDTGILNPEGYTLNYNEFIVYSPNQVRMRYL 208

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	73
d1efya2	215	Poly(ADP-ribose) polymerase, C-terminal domain {Ch	99.76
d1gs0a2	217	Poly(ADP-ribose) polymerase, C-terminal domain {Mo	99.67

>d1efya2 d.166.1.2 (A:797-1011) Poly(ADP-ribose) polymerase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: ADP-ribosylation
superfamily: ADP-ribosylation
family: Poly(ADP-ribose) polymerase, C-terminal domain
domain: Poly(ADP-ribose) polymerase, C-terminal domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.76  E-value=5.7e-19  Score=122.42  Aligned_cols=63  Identities=30%  Similarity=0.497  Sum_probs=55.1

Q ss_pred             CeEEeeeecCCeeeEeecccccCCCCCCceeeecc---------------------------CCCCCCcceEEEeeCccc
Q psy8899           1 MFVLGTANHSKSFLQFNAIKMAHAPPGHHSVMGRP---------------------------SSGGLYFPEYVVYRGEQM   53 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~~~~~~pPpGyhSViG~p---------------------------~~ggLnY~E~VVY~~eqi   53 (73)
                      .||||||++|+.+..+.+..++.||+|+||+.|.-                           ..+++.|+|||||+++|+
T Consensus       122 ~mll~~V~lG~~~~~~~~~~~~~~p~g~~s~~~~g~~~pd~~~~~~~d~v~vP~g~~~~~~~~~~~~~~~EyVVy~~~Q~  201 (215)
T d1efya2         122 LILLGEVALGNMYELKNASHITKLPKGKHSVKGLGKTAPDPTATTTLDGVEVPLGNGISTGINDTCLLYNEYIVYDVAQV  201 (215)
T ss_dssp             EEEEEEEECCSEEEESSCCCCCSCCTTCCEEEECCSEEECGGGCEEETTEEECCSCEEECSCCSSSCSBCEEEESCGGGE
T ss_pred             EEEEEEEEecceEEecCccccccCCCCccccccccccCCChhhccccCCeeccCCCccccCCcCCccccCEEEEEechhE
Confidence            38999999999987778888999999999997631                           235689999999999999


Q ss_pred             ceeEEEEeee
Q psy8899          54 CISYLAKNLY   63 (73)
Q Consensus        54 ~P~yLI~Y~~   63 (73)
                      +|+|||.|+.
T Consensus       202 ~p~YLI~~k~  211 (215)
T d1efya2         202 NLKYLLKLKF  211 (215)
T ss_dssp             EEEEEEEEEE
T ss_pred             eEEEEEEEEE
Confidence            9999999985

>d1gs0a2 d.166.1.2 (A:341-557) Poly(ADP-ribose) polymerase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: ADP-ribosylation
superfamily: ADP-ribosylation
family: Poly(ADP-ribose) polymerase, C-terminal domain
domain: Poly(ADP-ribose) polymerase, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=3.8e-17  Score=113.70  Aligned_cols=63  Identities=25%  Similarity=0.384  Sum_probs=51.6

Q ss_pred             CeEEeeeecCCeeeEeec-ccccCCCCCCceeeec------------------------------cCCCCCCcceEEEee
Q psy8899           1 MFVLGTANHSKSFLQFNA-IKMAHAPPGHHSVMGR------------------------------PSSGGLYFPEYVVYR   49 (73)
Q Consensus         1 ~~llcrV~vGr~~~~~~~-~~~~~pPpGyhSViG~------------------------------p~~ggLnY~E~VVY~   49 (73)
                      +||||||++|+....+.. ..+..||.|+|||.|.                              +..+.|.|+|||||+
T Consensus       120 ~m~l~~V~lG~~~~~~~~~~~~~~~p~g~~sv~~~g~~~p~p~~~~~~~g~~vp~g~~~~s~~~~~~~~~l~~nEyVVy~  199 (217)
T d1gs0a2         120 LLLLSEVALGQCNELLEANPKAQGLLRGKHSTKGMGKMAPSPAHFITLNGSTVPLGPASDTGILNPEGYTLNYNEFIVYS  199 (217)
T ss_dssp             EEEEEEEECCSEEEESSCCTTGGGGCTTCSEEEECCSEECCGGGCEEETTEEECCSCCEECCCCCSSSCCCSBCEEEESC
T ss_pred             EEEEEEEEecceeeeccCCcccccCCCCcceeeecccccCChhhccccCCeeccCCCccccCccCCCCCccccCeEEEEc
Confidence            379999999999866544 4567799999999542                              233568999999999


Q ss_pred             CcccceeEEEEeee
Q psy8899          50 GEQMCISYLAKNLY   63 (73)
Q Consensus        50 ~eqi~P~yLI~Y~~   63 (73)
                      .+|++|+|||.++.
T Consensus       200 ~~Qv~~~YLi~~k~  213 (217)
T d1gs0a2         200 PNQVRMRYLLKIQF  213 (217)
T ss_dssp             GGGEEEEEEEEEEE
T ss_pred             hhheeEEEEEEEEE
Confidence            99999999999874