Psyllid ID: psy8908

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------
Protein Sequence
MTENVENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MTENVENSLsnkmtslststssfepmishdprlNELATNMFKKTADYLIGELSSTQADYEVLEKMNNAtitkysdmkQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ
Flexible Loop (DISEMBL)
mtenvenslsnkmtslststssfepmishdprlNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATitkysdmkQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ
Low Complexity Region (SEG)
MTENVENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ
Disordered region (IsUnstruct)
***********************************LATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRL**********
Disordered Region (DISOPRED)
***********************************LATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK*****
Disordered Region (DISEMBL)
************************PMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ
Disordered Region (DISPRO)
***************************SHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQL***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTENVENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	137	2.2.26 [Sep-21-2011]
Q9VTE0	159	Biogenesis of lysosome-re	yes	N/A	0.839	0.723	0.5	3e-25
Q66KB9	147	Biogenesis of lysosome-re	yes	N/A	0.948	0.884	0.477	2e-22
Q9CWG9	143	Biogenesis of lysosome-re	yes	N/A	0.766	0.734	0.518	2e-21
Q32WR5	142	Biogenesis of lysosome-re	yes	N/A	0.766	0.739	0.518	5e-21
Q4R7C8	142	Biogenesis of lysosome-re	N/A	N/A	0.766	0.739	0.509	2e-20
Q6QNY1	142	Biogenesis of lysosome-re	yes	N/A	0.766	0.739	0.509	2e-20
A7RZS0	171	Biogenesis of lysosome-re	N/A	N/A	0.766	0.614	0.471	3e-18
Q54Y67	234	Biogenesis of lysosome-re	yes	N/A	0.708	0.414	0.377	3e-11
Q95XD3	132	Biogenesis of lysosome-re	yes	N/A	0.883	0.916	0.311	6e-10

>sp|Q9VTE0|BL1S2_DROME Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Drosophila melanogaster GN=blos2 PE=1 SV=2

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/116 (50%), Positives = 82/116 (70%), Gaps = 1/116 (0%)

Query: 18  TSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMK 77
           +S SSFE +  HDP L+ LAT MF KT +Y+  EL++   DY++LE+MN ATI KY DM+
Sbjct: 30  SSASSFEALTRHDPNLSRLATKMFNKTEEYITHELNAPLEDYKLLEEMNKATIAKYKDMR 89

Query: 78  QITVNISFSSARVP-AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 132
           QI  N++ S++ +   ++QL P ++QID+I D+V KLE AAYKLD Y+  LE + K
Sbjct: 90  QIAENLNTSTSELSLKFQQLAPMMQQIDEISDTVDKLEAAAYKLDAYSIALENRVK 145

Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.
Drosophila melanogaster (taxid: 7227)

>sp|Q66KB9|BL1S2_XENTR Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Xenopus tropicalis GN=bloc1s2 PE=2 SV=1

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/134 (47%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 5   VENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEK 64
           V  S S    ++ T+  + EP    +  +NEL  +MF K A YL GEL++T  DY++LE 
Sbjct: 17  VAPSASQDDATVETAEEAVEP---PEADINELCRDMFSKMALYLTGELTTTSEDYKLLEN 73

Query: 65  MNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHY 123
           MN  T  KY +MK I  NIS +   +   Y  L P LEQI+QI + V  LE AAYKLD Y
Sbjct: 74  MNKLTSLKYMEMKDIAGNISRNLKDLNKKYASLQPYLEQINQIEEQVASLENAAYKLDAY 133

Query: 124 AKRLEAKFKQLEKQ 137
           +KRLEAKFK+LEK+
Sbjct: 134 SKRLEAKFKKLEKR 147

May play a role in cell proliferation. May be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system. May play a role in intracellular vesicle trafficking.

Xenopus tropicalis (taxid: 8364)

>sp|Q9CWG9|BL1S2_MOUSE Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Mus musculus GN=Bloc1s2 PE=1 SV=1

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/106 (51%), Positives = 74/106 (69%), Gaps = 1/106 (0%)

Query: 33  LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-P 91
           +NEL  +MF K A YL GEL++T  DY++LE MN  T  KY +MK I +NIS +   +  
Sbjct: 38  INELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 97

Query: 92  AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
            Y +L P L+QI+ I + V  LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 98  KYAELQPYLDQINMIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 143

May play a role in cell proliferation. The BLOC-1 complex is required for normal biogenesis of lysosome-related organelles, such as platelet dense granules and melanosomes. Plays a role in intracellular vesicle trafficking.

Mus musculus (taxid: 10090)

>sp|Q32WR5|BL1S2_RAT Biogenesis of lysosome-related organelles complex-1 subunit 2 OS=Rattus norvegicus GN=Bloc1s2 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/106 (51%), Positives = 73/106 (68%), Gaps = 1/106 (0%)

Query: 33  LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-P 91
           +NEL  +MF K A YL GEL++T  DY++LE MN  T  KY +MK I +NIS +   +  
Sbjct: 37  INELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 96

Query: 92  AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
            Y  L P L+QI+ I + V  LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 97  KYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 142

May play a role in cell proliferation. The BLOC-1 complex is required for normal biogenesis of lysosome-related organelles, such as platelet dense granules and melanosomes. Plays a role in intracellular vesicle trafficking (By similarity). May be a mediator in the mechanisms of neuropathic pain.

Rattus norvegicus (taxid: 10116)

>sp|Q4R7C8|BL1S2_MACFA Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Macaca fascicularis GN=BLOC1S2 PE=2 SV=1

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 1/106 (0%)

Query: 33  LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-P 91
           + EL  +MF K A YL GEL++T  DY++LE MN  T  KY +MK I +NIS +   +  
Sbjct: 37  ITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 96

Query: 92  AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
            Y  L P L+QI+ I + V  LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 97  KYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 142

May play a role in cell proliferation. The BLOC-1 complex is required for normal biogenesis of lysosome-related organelles, such as platelet dense granules and melanosomes. Plays a role in intracellular vesicle trafficking.

Macaca fascicularis (taxid: 9541)

>sp|Q6QNY1|BL1S2_HUMAN Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Homo sapiens GN=BLOC1S2 PE=1 SV=1

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 1/106 (0%)

Query: 33  LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-P 91
           + EL  +MF K A YL GEL++T  DY++LE MN  T  KY +MK I +NIS +   +  
Sbjct: 37  ITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQ 96

Query: 92  AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
            Y  L P L+QI+ I + V  LEQAAYKLD Y+K+LEAK+K+LEK+
Sbjct: 97  KYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKKLEKR 142

May play a role in cell proliferation. The BLOC-1 complex is required for normal biogenesis of lysosome-related organelles, such as platelet dense granules and melanosomes. Plays a role in intracellular vesicle trafficking.

Homo sapiens (taxid: 9606)

>sp|A7RZS0|BL1S2_NEMVE Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Nematostella vectensis GN=bloc1s2 PE=3 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 1/106 (0%)

Query: 33  LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVP- 91
           L E     F K   YL GEL+++  DY +LE++NN T  KY +M  +T ++  +  ++  
Sbjct: 66  LKETCRVAFDKITQYLNGELTASLEDYTLLEQLNNLTTDKYKEMSTMTKSLITTMEKLDD 125

Query: 92  AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
            YK L P LEQID+I DSV  LEQAAY+LD Y+K+LE KFK+LE++
Sbjct: 126 KYKSLQPYLEQIDRIEDSVSSLEQAAYRLDAYSKKLENKFKRLERR 171

May be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system.

Nematostella vectensis (taxid: 45351)

>sp|Q54Y67|BL1S2_DICDI Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Dictyostelium discoideum GN=bloc1s2 PE=3 SV=2

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 40  MFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNIS-FSSARVPAYKQLIP 98
           MF K + Y+  EL++T +DY +L +MNN T +KY DM  +T  +S F       Y++  P
Sbjct: 85  MFTKVSSYIKSELATTVSDYNLLIQMNNITSSKYQDMTNVTKGLSVFMGDLKIKYEEFQP 144

Query: 99  QLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEK 136
             ++I+++  +V  LE+    LD Y KRLE K K ++K
Sbjct: 145 YFDKINELDKNVTDLEKTVQLLDEYTKRLEQKVKNIDK 182

May be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system.

Dictyostelium discoideum (taxid: 44689)

>sp|Q95XD3|BL1S2_CAEEL Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Caenorhabditis elegans GN=blos-2 PE=1 SV=1

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 1/122 (0%)

Query: 17  STSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDM 76
           STS+       +  P + +LA NM  K   +   +L  +  +Y++LE MNN T  +Y DM
Sbjct: 9   STSSPPVPSTPAPVPHIRQLADNMTDKVGQFFQHQLEGSIEEYKLLETMNNTTAQRYVDM 68

Query: 77  KQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLE 135
           K +   ++     +   Y+ L P L QID + +S  +LE+A   L++Y  +LE+K   ++
Sbjct: 69  KVVAEKVAGKLDNLNQKYENLRPYLSQIDAMDESTRRLEEATAVLENYVTQLESKLTNIQ 128

Query: 136 KQ 137
           +Q
Sbjct: 129 QQ 130

Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in gut granule biogenesis.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
189237985	142	PREDICTED: similar to AGAP005353-PA [Tri	0.985	0.950	0.627	3e-36
332374726	142	unknown [Dendroctonus ponderosae]	0.985	0.950	0.591	3e-35
242004196	149	conserved hypothetical protein [Pediculu	0.832	0.765	0.608	4e-30
240848963	146	biogenesis of lysosome-related organelle	0.897	0.842	0.556	3e-27
118786313	140	AGAP005353-PA [Anopheles gambiae str. PE	0.905	0.885	0.512	2e-25
312377316	141	hypothetical protein AND_27776 [Anophele	0.905	0.879	0.512	3e-25
270008301	103	hypothetical protein TcasGA2_TC030551 [T	0.708	0.941	0.544	5e-25
345495426	164	PREDICTED: biogenesis of lysosome-relate	0.861	0.719	0.554	1e-24
195378054	164	GJ13641 [Drosophila virilis] gi|19415496	0.861	0.719	0.516	2e-24
195440194	164	GK11252 [Drosophila willistoni] gi|19416	0.861	0.719	0.525	2e-24

>gi|189237985|ref|XP_001812669.1| PREDICTED: similar to AGAP005353-PA [Tribolium castaneum]

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 2/137 (1%)

Query: 2   TENVENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEV 61
           +E V +S   K  +LSTSTSSFE +  HDP L+ LAT MF KT+DYL GEL+ST  DY +
Sbjct: 7   SEGVTDS-PKKGPTLSTSTSSFEALDPHDPNLSRLATTMFNKTSDYLYGELTSTLDDYRL 65

Query: 62  LEKMNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKL 120
           LE MN ATITKYSDMK I  N+S S   +   Y  L P L+QIDQI DSV+KLEQAAYKL
Sbjct: 66  LENMNRATITKYSDMKHIAANVSKSMQELNEKYNSLQPYLQQIDQIEDSVVKLEQAAYKL 125

Query: 121 DHYAKRLEAKFKQLEKQ 137
           D Y+KRLEAKFK LEK+
Sbjct: 126 DAYSKRLEAKFKSLEKR 142

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332374726|gb|AEE62504.1| unknown [Dendroctonus ponderosae]

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/137 (59%), Positives = 101/137 (73%), Gaps = 2/137 (1%)

Query: 2   TENVENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEV 61
           ++ +E+S   +  +LSTSTSSFE +  HDP L+ LA  +F KT+DYL GEL+ST  DY++
Sbjct: 7   SDGIEDS-PRRGPTLSTSTSSFEALDPHDPNLSRLANALFSKTSDYLYGELTSTLDDYKL 65

Query: 62  LEKMNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKL 120
           LE MN ATI+KYSDMK I  N+  S   +   Y  LIP L+QIDQI DSV+KLEQAAYKL
Sbjct: 66  LENMNRATISKYSDMKNIAANVGKSMVELNQKYDALIPLLQQIDQIEDSVVKLEQAAYKL 125

Query: 121 DHYAKRLEAKFKQLEKQ 137
           D Y+KRLEAKFK LEK+
Sbjct: 126 DAYSKRLEAKFKNLEKK 142

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242004196|ref|XP_002423007.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212505923|gb|EEB10269.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/115 (60%), Positives = 85/115 (73%), Gaps = 1/115 (0%)

Query: 15  SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
           +LSTSTS FEP+  HDP ++ LA  MF+K A+ L+GEL+STQ DY +LE MN A ITKYS
Sbjct: 25  TLSTSTSGFEPLDPHDPNISLLANKMFQKCAELLLGELTSTQEDYNLLENMNKAVITKYS 84

Query: 75  DMKQITVNISFSSARVPA-YKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLE 128
           DM Q+ + I+ S   +   YKQL P L+QID I DSV KLEQAAYKLD Y+KRLE
Sbjct: 85  DMHQVAIKITNSMQEIDTKYKQLRPYLDQIDLIEDSVNKLEQAAYKLDSYSKRLE 139

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|240848963|ref|NP_001155758.1| biogenesis of lysosome-related organelles complex 1 subunit 2 [Acyrthosiphon pisum] gi|239788527|dbj|BAH70938.1| ACYPI008364 [Acyrthosiphon pisum]

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 89/124 (71%), Gaps = 1/124 (0%)

Query: 15  SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
           +LSTSTSSFE    HDP L+ L+T MF+KT++YL+GEL+ T+ DY++LE MN  T+ KY+
Sbjct: 22  TLSTSTSSFERNDPHDPNLSLLSTKMFEKTSEYLMGELNITEEDYKLLETMNKVTMQKYA 81

Query: 75  DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
             +QI  ++      +   YK L P L QID I DSV KLEQAA+KLD YAKRLEAK+K 
Sbjct: 82  SYRQIASDVGKQIIELNEKYKSLEPYLSQIDLIEDSVSKLEQAAFKLDAYAKRLEAKYKS 141

Query: 134 LEKQ 137
           LEK+
Sbjct: 142 LEKR 145

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118786313|ref|XP_315366.3| AGAP005353-PA [Anopheles gambiae str. PEST] gi|116126260|gb|EAA11293.3| AGAP005353-PA [Anopheles gambiae str. PEST]

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/125 (51%), Positives = 89/125 (71%), Gaps = 1/125 (0%)

Query: 12  KMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATIT 71
           K  +LSTSTSSFEP  +HDP L+ LAT MF+KT DY+  EL+ST  DY+++E MN A + 
Sbjct: 13  KGPTLSTSTSSFEPFDAHDPNLSRLATKMFQKTGDYITHELASTVDDYKLIESMNRAMMG 72

Query: 72  KYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAK 130
           K +DM+Q++ +I+  +A +   Y+ L P L++ID I  +V KLE AAY+LD Y+ RLE K
Sbjct: 73  KVADMRQMSQSIAAKNAELNQKYEDLKPLLQRIDDIESTVDKLEAAAYQLDSYSIRLENK 132

Query: 131 FKQLE 135
           FK L+
Sbjct: 133 FKSLK 137

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312377316|gb|EFR24175.1| hypothetical protein AND_27776 [Anopheles darlingi]

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/125 (51%), Positives = 90/125 (72%), Gaps = 1/125 (0%)

Query: 12  KMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATIT 71
           K  +LSTSTSSFEP  +HDP L+ LAT MF+KT +Y+  EL+ST  DY+++E MN A +T
Sbjct: 13  KGPTLSTSTSSFEPFDAHDPNLSRLATKMFQKTGEYISHELASTVDDYKLIENMNRAMMT 72

Query: 72  KYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAK 130
           K +DM+Q++ +I+  +A +   Y++L P L++ID I  +V KLE AAY+LD Y  RLE K
Sbjct: 73  KVADMRQMSQSIAAKNAELNQKYEELKPLLQRIDDIEATVDKLEAAAYQLDSYTIRLENK 132

Query: 131 FKQLE 135
           FK L+
Sbjct: 133 FKSLK 137

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270008301|gb|EFA04749.1| hypothetical protein TcasGA2_TC030551 [Tribolium castaneum]

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 78/123 (63%), Gaps = 26/123 (21%)

Query: 15  SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
           +LSTSTSSFE +  HDP L+ LAT MF KT+DYL GEL+ST  DY +LE MN        
Sbjct: 7   TLSTSTSSFEALDPHDPNLSRLATTMFNKTSDYLYGELTSTLDDYRLLENMN-------- 58

Query: 75  DMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQL 134
                             +  L P L+QIDQI DSV+KLEQAAYKLD Y+KRLEAKFK L
Sbjct: 59  ------------------HNSLQPYLQQIDQIEDSVVKLEQAAYKLDAYSKRLEAKFKSL 100

Query: 135 EKQ 137
           EK+
Sbjct: 101 EKR 103

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495426|ref|XP_003427502.1| PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2-like [Nasonia vitripennis]

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 1/119 (0%)

Query: 20  TSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQI 79
           TSSFE +  HDP L+ LA  MF+KT++YL  EL++T ADY +LE+MN  TI KY+++K I
Sbjct: 43  TSSFEALDPHDPNLSRLANTMFQKTSEYLQEELTATHADYRLLERMNKETIAKYAELKTI 102

Query: 80  TVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEKQ 137
           + N+S S   +   YK+L P L+ I+QI DSV KLEQAAYKL  Y+ RLEAKFK +EK+
Sbjct: 103 SSNVSQSLDLLNQKYKKLQPVLDNINQIDDSVTKLEQAAYKLLAYSNRLEAKFKDIEKE 161

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195378054|ref|XP_002047802.1| GJ13641 [Drosophila virilis] gi|194154960|gb|EDW70144.1| GJ13641 [Drosophila virilis]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 88/120 (73%), Gaps = 2/120 (1%)

Query: 15  SLSTSTSSFEPMI-SHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKY 73
           +LSTSTSSFE +  +HDP L++LAT MF+KT +Y+  EL++   DY++LE+MN ATI KY
Sbjct: 32  TLSTSTSSFEALAHAHDPNLSKLATKMFQKTEEYITHELNAPLEDYKLLEEMNKATIAKY 91

Query: 74  SDMKQITVNISFSSARVPA-YKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 132
            DM+QI  N++ S+  +   ++QL P ++QID+I D+V KLE AAYKLD Y+  LE + K
Sbjct: 92  KDMRQIAENLNVSTNELCGKFQQLAPLMQQIDEISDTVDKLEAAAYKLDAYSIALENRVK 151

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195440194|ref|XP_002067927.1| GK11252 [Drosophila willistoni] gi|194164012|gb|EDW78913.1| GK11252 [Drosophila willistoni]

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 87/120 (72%), Gaps = 2/120 (1%)

Query: 15  SLSTSTSSFEPMI-SHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKY 73
           +LSTSTSSFE +  +HDP L+ LAT MF+KT DY+  EL++   DY++LE+MN ATI KY
Sbjct: 30  TLSTSTSSFEALAHAHDPNLSRLATKMFRKTEDYITHELNAPLEDYKLLEEMNKATIEKY 89

Query: 74  SDMKQITVNISFSSARVP-AYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 132
            DM+QI  N++ S+  +   ++QL P ++QID+I D+V KLE AAYKLD Y+  LE + K
Sbjct: 90  KDMRQIAENLNGSTNELSLKFQQLAPLMQQIDEISDTVDKLEAAAYKLDAYSIALENRVK 149

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
FB|FBgn0036118	159	blos2 "BLOC-1 subunit 2" [Dros	0.839	0.723	0.5	2.2e-25
UNIPROTKB|Q66KB9	147	bloc1s2 "Biogenesis of lysosom	0.948	0.884	0.477	1.4e-23
UNIPROTKB|F1S8V1	184	BLOC1S2 "Uncharacterized prote	0.875	0.652	0.467	2.1e-22
RGD|1306551	142	Bloc1s2 "biogenesis of lysosom	0.875	0.845	0.467	2.1e-22
UNIPROTKB|F1N5K4	166	BLOC1S2 "Uncharacterized prote	0.875	0.722	0.467	2.6e-22
UNIPROTKB|Q6QNY1	142	BLOC1S2 "Biogenesis of lysosom	0.875	0.845	0.459	9e-22
UNIPROTKB|Q4R7C8	142	BLOC1S2 "Biogenesis of lysosom	0.875	0.845	0.459	9e-22
UNIPROTKB|E1BXG7	143	BLOC1S2 "Uncharacterized prote	0.875	0.839	0.460	6.3e-21
UNIPROTKB|Q95XD3	132	blos-2 "Biogenesis of lysosome	0.883	0.916	0.311	1.5e-12
TAIR|locus:2157854	127	BLOS2 "AT5G49550" [Arabidopsis	0.729	0.787	0.257	3e-05

FB|FBgn0036118 blos2 "BLOC-1 subunit 2" [Drosophila melanogaster (taxid:7227)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 58/116 (50%), Positives = 82/116 (70%)

Query:    18 TSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMK 77
             +S SSFE +  HDP L+ LAT MF KT +Y+  EL++   DY++LE+MN ATI KY DM+
Sbjct:    30 SSASSFEALTRHDPNLSRLATKMFNKTEEYITHELNAPLEDYKLLEEMNKATIAKYKDMR 89

Query:    78 QITVNISFSSARVPA-YKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 132
             QI  N++ S++ +   ++QL P ++QID+I D+V KLE AAYKLD Y+  LE + K
Sbjct:    90 QIAENLNTSTSELSLKFQQLAPMMQQIDEISDTVDKLEAAAYKLDAYSIALENRVK 145

GO:0031083 "BLOC-1 complex" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q66KB9 bloc1s2 "Biogenesis of lysosome-related organelles complex 1 subunit 2" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 64/134 (47%), Positives = 83/134 (61%)

Query:     5 VENSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEK 64
             V  S S    ++ T+  + EP    +  +NEL  +MF K A YL GEL++T  DY++LE 
Sbjct:    17 VAPSASQDDATVETAEEAVEPP---EADINELCRDMFSKMALYLTGELTTTSEDYKLLEN 73

Query:    65 MNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHY 123
             MN  T  KY +MK I  NIS +   +   Y  L P LEQI+QI + V  LE AAYKLD Y
Sbjct:    74 MNKLTSLKYMEMKDIAGNISRNLKDLNKKYASLQPYLEQINQIEEQVASLENAAYKLDAY 133

Query:   124 AKRLEAKFKQLEKQ 137
             +KRLEAKFK+LEK+
Sbjct:   134 SKRLEAKFKKLEKR 147

GO:0005634 "nucleus" evidence=ISS

GO:0005813 "centrosome" evidence=ISS

GO:0008089 "anterograde axon cargo transport" evidence=ISS

GO:0031083 "BLOC-1 complex" evidence=ISS

GO:0031175 "neuron projection development" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS

UNIPROTKB|F1S8V1 BLOC1S2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 58/124 (46%), Positives = 81/124 (65%)

Query:    15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
             ++ T+  + EP    +  +NEL  +MF K A YL GEL++T  DY++LE MN  T  KY 
Sbjct:    64 AVETAEEAKEPA---EADINELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 120

Query:    75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
             +MK I +NIS +   +   Y  L P L+QI+ I + V  LEQAAYKLD Y+K+LEAK+K+
Sbjct:   121 EMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKK 180

Query:   134 LEKQ 137
             LEK+
Sbjct:   181 LEKR 184

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0043015 "gamma-tubulin binding" evidence=IEA

GO:0042981 "regulation of apoptotic process" evidence=IEA

GO:0031083 "BLOC-1 complex" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0000930 "gamma-tubulin complex" evidence=IEA

RGD|1306551 Bloc1s2 "biogenesis of lysosomal organelles complex-1, subunit 2" [Rattus norvegicus (taxid:10116)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 58/124 (46%), Positives = 81/124 (65%)

Query:    15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
             ++ T+  + EP    +  +NEL  +MF K A YL GEL++T  DY++LE MN  T  KY 
Sbjct:    22 AVETAEEAKEPA---EADINELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 78

Query:    75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
             +MK I +NIS +   +   Y  L P L+QI+ I + V  LEQAAYKLD Y+K+LEAK+K+
Sbjct:    79 EMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKK 138

Query:   134 LEKQ 137
             LEK+
Sbjct:   139 LEKR 142

GO:0000930 "gamma-tubulin complex" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=ISO;IDA

GO:0005829 "cytosol" evidence=ISO

GO:0008022 "protein C-terminus binding" evidence=ISO;IPI

GO:0008089 "anterograde axon cargo transport" evidence=ISS

GO:0008284 "positive regulation of cell proliferation" evidence=IEA;ISO

GO:0031083 "BLOC-1 complex" evidence=ISO;ISS;IBA

GO:0031175 "neuron projection development" evidence=ISS

GO:0042981 "regulation of apoptotic process" evidence=IEA;ISO

GO:0043015 "gamma-tubulin binding" evidence=IEA;ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS

GO:0055037 "recycling endosome" evidence=IDA

UNIPROTKB|F1N5K4 BLOC1S2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 58/124 (46%), Positives = 81/124 (65%)

Query:    15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
             ++ T+  + EP    +  +NEL  +MF K A YL GEL++T  DY++LE MN  T  KY 
Sbjct:    46 AVETAEEAKEPA---EADINELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 102

Query:    75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
             +MK I +NIS +   +   Y  L P L+QI+ I + V  LEQAAYKLD Y+K+LEAK+K+
Sbjct:   103 EMKDIAINISRNLKDLNQKYAGLQPYLDQINIIEEQVAALEQAAYKLDAYSKKLEAKYKK 162

Query:   134 LEKQ 137
             LEK+
Sbjct:   163 LEKR 166

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0043015 "gamma-tubulin binding" evidence=IEA

GO:0042981 "regulation of apoptotic process" evidence=IEA

GO:0031083 "BLOC-1 complex" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0000930 "gamma-tubulin complex" evidence=IEA

UNIPROTKB|Q6QNY1 BLOC1S2 "Biogenesis of lysosome-related organelles complex 1 subunit 2" [Homo sapiens (taxid:9606)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 57/124 (45%), Positives = 80/124 (64%)

Query:    15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
             ++ T+  + EP    +  + EL  +MF K A YL GEL++T  DY++LE MN  T  KY 
Sbjct:    22 AVETAEEAKEPA---EADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 78

Query:    75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
             +MK I +NIS +   +   Y  L P L+QI+ I + V  LEQAAYKLD Y+K+LEAK+K+
Sbjct:    79 EMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKK 138

Query:   134 LEKQ 137
             LEK+
Sbjct:   139 LEKR 142

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0005813 "centrosome" evidence=IEA;IDA

GO:0008022 "protein C-terminus binding" evidence=IEA;IPI

GO:0055037 "recycling endosome" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IBA

GO:0000930 "gamma-tubulin complex" evidence=IDA

GO:0043015 "gamma-tubulin binding" evidence=IDA

GO:0008284 "positive regulation of cell proliferation" evidence=IDA

GO:0042981 "regulation of apoptotic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0031083 "BLOC-1 complex" evidence=IDA

GO:0032438 "melanosome organization" evidence=NAS

GO:0060155 "platelet dense granule organization" evidence=NAS

GO:0007020 "microtubule nucleation" evidence=NAS

GO:0005515 "protein binding" evidence=IPI

GO:0031175 "neuron projection development" evidence=ISS

GO:0008089 "anterograde axon cargo transport" evidence=ISS

GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS

UNIPROTKB|Q4R7C8 BLOC1S2 "Biogenesis of lysosome-related organelles complex 1 subunit 2" [Macaca fascicularis (taxid:9541)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 57/124 (45%), Positives = 80/124 (64%)

Query:    15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
             ++ T+  + EP    +  + EL  +MF K A YL GEL++T  DY++LE MN  T  KY 
Sbjct:    22 AVETAEEAKEPA---EADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 78

Query:    75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQ 133
             +MK I +NIS +   +   Y  L P L+QI+ I + V  LEQAAYKLD Y+K+LEAK+K+
Sbjct:    79 EMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKK 138

Query:   134 LEKQ 137
             LEK+
Sbjct:   139 LEKR 142

GO:0008089 "anterograde axon cargo transport" evidence=ISS

GO:0031083 "BLOC-1 complex" evidence=ISS

GO:0031175 "neuron projection development" evidence=ISS

GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS

UNIPROTKB|E1BXG7 BLOC1S2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 58/126 (46%), Positives = 80/126 (63%)

Query:    15 SLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYS 74
             ++ T+  + EP    +  +NEL  +MF K A YL GEL++T  DY++LE MN  T  KY 
Sbjct:    21 AVETAEEAKEPA---EADINELCKDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYL 77

Query:    75 DMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLE--AKF 131
             +MK I +NIS +   +   Y  L P LEQI+ I + V  LEQAAYKLD Y+KRL   +K+
Sbjct:    78 EMKDIAINISRNLKDLNQKYAALQPYLEQINLIEEQVAALEQAAYKLDAYSKRLGNYSKY 137

Query:   132 KQLEKQ 137
             K+LEK+
Sbjct:   138 KKLEKR 143

GO:0000930 "gamma-tubulin complex" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0031083 "BLOC-1 complex" evidence=IEA

GO:0042981 "regulation of apoptotic process" evidence=IEA

GO:0043015 "gamma-tubulin binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|Q95XD3 blos-2 "Biogenesis of lysosome-related organelles complex 1 subunit 2" [Caenorhabditis elegans (taxid:6239)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 38/122 (31%), Positives = 65/122 (53%)

Query:    17 STSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDM 76
             STS+       +  P + +LA NM  K   +   +L  +  +Y++LE MNN T  +Y DM
Sbjct:     9 STSSPPVPSTPAPVPHIRQLADNMTDKVGQFFQHQLEGSIEEYKLLETMNNTTAQRYVDM 68

Query:    77 KQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLE 135
             K +   ++     +   Y+ L P L QID + +S  +LE+A   L++Y  +LE+K   ++
Sbjct:    69 KVVAEKVAGKLDNLNQKYENLRPYLSQIDAMDESTRRLEEATAVLENYVTQLESKLTNIQ 128

Query:   136 KQ 137
             +Q
Sbjct:   129 QQ 130

GO:0016197 "endosomal transport" evidence=IMP

GO:0031083 "BLOC-1 complex" evidence=TAS

TAIR|locus:2157854 BLOS2 "AT5G49550" [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 26/101 (25%), Positives = 46/101 (45%)

Query:    33 LNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPA 92
             L E   N+F   +  +  EL  T    ++LEKMN    ++Y DM  +   +   + ++ +
Sbjct:     8 LAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAEQMKS 67

Query:    93 YKQLIPQ-LEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFK 132
                 + + + Q+D I   V + E     LD Y   LE+K +
Sbjct:    68 KSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLESKIR 108


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.123   0.319    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      137       137   0.00091  102 3  10 23  0.48    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  547 (58 KB)
  Total size of DFA:  148 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.42u 0.09s 24.51t   Elapsed:  00:00:20
  Total cpu time:  24.42u 0.09s 24.51t   Elapsed:  00:00:20
  Start:  Thu Aug 15 13:01:49 2013   End:  Thu Aug 15 13:02:09 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010048 "vernalization response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q32WR5	BL1S2_RAT	No assigned EC number	0.5188	0.7664	0.7394	yes	N/A
Q9CWG9	BL1S2_MOUSE	No assigned EC number	0.5188	0.7664	0.7342	yes	N/A
Q9VTE0	BL1S2_DROME	No assigned EC number	0.5	0.8394	0.7232	yes	N/A
Q95XD3	BL1S2_CAEEL	No assigned EC number	0.3114	0.8832	0.9166	yes	N/A
Q6QNY1	BL1S2_HUMAN	No assigned EC number	0.5094	0.7664	0.7394	yes	N/A
Q66KB9	BL1S2_XENTR	No assigned EC number	0.4776	0.9489	0.8843	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	137
pfam10046	99	pfam10046, BLOC1_2, Biogenesis of lysosome-related	8e-20

>gnl|CDD|163611 pfam10046, BLOC1_2, Biogenesis of lysosome-related organelles complex-1 subunit 2

 Score = 77.7 bits (192), Expect = 8e-20
 Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 1/99 (1%)

Query: 37  ATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNI-SFSSARVPAYKQ 95
           A  MF K + Y+  EL  +  D ++LEKMN  T  KY  M+Q    +     A    Y++
Sbjct: 1   AEKMFNKISKYVEAELEISVEDLKLLEKMNENTALKYKKMRQSAKGLRVEIEALNQKYEE 60

Query: 96  LIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQL 134
           L P L+QID I   V  LE+A Y+LD Y+K LE+K K L
Sbjct: 61  LKPYLQQIDAIEQQVTTLEEAVYELDEYSKELESKVKSL 99

Members of this family of proteins play a role in cellular proliferation, as well as in the biogenesis of specialized organelles of the endosomal-lysosomal system. Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	137
KOG4559|consensus	120		100.0
PF10046	99	BLOC1_2: Biogenesis of lysosome-related organelles	100.0
PF10157	149	DUF2365: Uncharacterized conserved protein (DUF236	95.15
PF09403	126	FadA: Adhesion protein FadA; InterPro: IPR018543 F	93.92
PF04012	221	PspA_IM30: PspA/IM30 family; InterPro: IPR007157 T	91.61
PRK10698	222	phage shock protein PspA; Provisional	89.86
KOG0980|consensus	980		88.5
PF10398	79	DUF2443: Protein of unknown function (DUF2443); In	88.38
PF15358	558	TSKS: Testis-specific serine kinase substrate	86.12
PRK11637	428	AmiB activator; Provisional	84.39
PF10779	71	XhlA: Haemolysin XhlA; InterPro: IPR019715 Haemoly	83.09
PF07195	239	FliD_C: Flagellar hook-associated protein 2 C-term	82.43
PRK09039	343	hypothetical protein; Validated	82.36
PF13094	160	CENP-Q: CENP-Q, a CENPA-CAD centromere complex sub	80.74
PF07058	351	Myosin_HC-like: Myosin II heavy chain-like; InterP	80.46

>KOG4559|consensus

Probab=100.00  E-value=1.4e-36  Score=223.05  Aligned_cols=117  Identities=42%  Similarity=0.640  Sum_probs=113.6

Q ss_pred             cccccCCccccccCCcccCCCCCchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHhhhHHHHHHHHHhh
Q psy8908           7 NSLSNKMTSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFS   86 (137)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~mf~kvs~Yl~~El~~t~~dy~LLE~mN~~~s~kY~~m~~~a~~l~~~   86 (137)
                      .+++.+||||| |.++||++..|+|+|++||..||.|+.+|+++||++..+||+|||.||++++.||.+|+++|..+..+
T Consensus         2 ~d~~e~a~Tls-Sa~~~~a~~~~~PhirqLAdkM~dKt~ef~qHeLe~~iEdYKLLEeMNkaTaakY~DMk~iAEkla~k   80 (120)
T KOG4559|consen    2 ADINEHAPTLS-SAPPFEALPAHDPHIRQLADKMFDKTEEFFQHELEAPIEDYKLLEEMNKATAAKYKDMKQIAEKLAGK   80 (120)
T ss_pred             CCccccCCccc-CCCCCcCCCCCCccHHHHHHHHHHhHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            46789999998 55789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhh-hhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8908          87 SARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYKLDHYA  124 (137)
Q Consensus        87 ~~~L-~ky~~l~pyl~qID~Ie~~V~~LE~~a~~LD~Ys  124 (137)
                      +..| +||+.|.||++|||.|++++++||+++++||.|+
T Consensus        81 ~deLn~KfenL~P~lqQIDaiddst~kLEaAa~~Ld~Y~  119 (120)
T KOG4559|consen   81 LDELNLKFENLAPMLQQIDAIDDSTDKLEAAAAKLDAYS  119 (120)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence            9999 9999999999999999999999999999999997

>PF10046 BLOC1_2: Biogenesis of lysosome-related organelles complex-1 subunit 2 ; InterPro: IPR019269 This entry represents a family of proteins that play a role in cellular proliferation, as well as in the biogenesis of specialised organelles of the endosomal-lysosomal system []

Probab=100.00  E-value=3.9e-36  Score=216.19  Aligned_cols=98  Identities=46%  Similarity=0.722  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhh-hhhHhhHHHHHHHHHHHHHHHHHHH
Q psy8908          37 ATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQ  115 (137)
Q Consensus        37 a~~mf~kvs~Yl~~El~~t~~dy~LLE~mN~~~s~kY~~m~~~a~~l~~~~~~L-~ky~~l~pyl~qID~Ie~~V~~LE~  115 (137)
                      |++||++++.||+||+++|.+||+|||+||++++.||.+|+++++++++++++| ++|++|+||++|||+||++|++||+
T Consensus         1 ~~~~f~~~~~~v~~el~~t~~d~~LLe~mN~~~~~kY~~~~~~~~~l~~~~~~l~~k~~~l~~~l~~Id~Ie~~V~~LE~   80 (99)
T PF10046_consen    1 AERMFSKVSKYVESELEATNEDYNLLENMNKATSLKYKKMKDIAAGLEKNLEDLNQKYEELQPYLQQIDQIEEQVTELEQ   80 (99)
T ss_pred             ChhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999999999999999999999999 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhh
Q psy8908         116 AAYKLDHYAKRLEAKFKQL  134 (137)
Q Consensus       116 ~a~~LD~Ysk~LE~K~k~l  134 (137)
                      +|++||+||++||+|||+|
T Consensus        81 ~v~~LD~ysk~LE~k~k~l   99 (99)
T PF10046_consen   81 TVYELDEYSKELESKFKKL   99 (99)
T ss_pred             HHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999975

>PF10157 DUF2365: Uncharacterized conserved protein (DUF2365); InterPro: IPR019314 This entry is found in a highly conserved family of proteins which have no known function

Probab=95.15  E-value=0.96  Score=35.17  Aligned_cols=84  Identities=8%  Similarity=0.069  Sum_probs=45.8

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhh-hhhHhhHHHHHHHHHHHHH
Q psy8908          31 PRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDS  109 (137)
Q Consensus        31 ~~l~~la~~mf~kvs~Yl~~El~~t~~dy~LLE~mN~~~s~kY~~m~~~a~~l~~~~~~L-~ky~~l~pyl~qID~Ie~~  109 (137)
                      ..+.+.-+.|+.++..-|++=...|.+..+....-...       +.+.+..--+.+-.| .+-++|..-++.+..+-.+
T Consensus        62 ~~ia~svd~ll~~L~~~L~~mS~~Tv~~~~~y~~sv~~-------~cdsvD~sik~~y~liakceELn~~M~~v~~La~q  134 (149)
T PF10157_consen   62 QAIAESVDSLLRSLRSSLHSMSAITVEHMETYKDSVDK-------LCDSVDASIKSMYTLIAKCEELNESMKPVYKLAQQ  134 (149)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34566667777777777777555666666555544332       333333333334445 5555555555555555555


Q ss_pred             HHHHHHHHHHHH
Q psy8908         110 VLKLEQAAYKLD  121 (137)
Q Consensus       110 V~~LE~~a~~LD  121 (137)
                      |..+=..+..||
T Consensus       135 IK~Ik~~lD~lE  146 (149)
T PF10157_consen  135 IKDIKKLLDLLE  146 (149)
T ss_pred             HHHHHHHHHHHH
Confidence            555555554444

>PF09403 FadA: Adhesion protein FadA; InterPro: IPR018543 FadA (Fusobacterium adhesin A) is an adhesin which forms two alpha helices

Probab=93.92  E-value=1.4  Score=33.50  Aligned_cols=102  Identities=20%  Similarity=0.252  Sum_probs=59.7

Q ss_pred             ccccccCCcccCCCCCchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhh-hh
Q psy8908          14 TSLSTSTSSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-PA   92 (137)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~l~~la~~mf~kvs~Yl~~El~~t~~dy~LLE~mN~~~s~kY~~m~~~a~~l~~~~~~L-~k   92 (137)
                      ..|-.|++||-+.+                 +.=+.+++..-..+|+-|++   .-..+|...++.+..+...+..+ ..
T Consensus         8 ~~lllss~sfaA~~-----------------~~~v~~~l~~LEae~q~L~~---kE~~r~~~~k~~ae~a~~~L~~~~~~   67 (126)
T PF09403_consen    8 GMLLLSSISFAATA-----------------TASVESELNQLEAEYQQLEQ---KEEARYNEEKQEAEAAEAELAELKEL   67 (126)
T ss_dssp             --------------------------------HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccc-----------------chHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35677888887743                 33344556666777777665   45678999999999999999999 99


Q ss_pred             hHhhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8908          93 YKQLIPQLEQIDQIYDS---VLKLEQAAYKLDHYAKRLEAKFKQLE  135 (137)
Q Consensus        93 y~~l~pyl~qID~Ie~~---V~~LE~~a~~LD~Ysk~LE~K~k~le  135 (137)
                      |.+...-+..|-+..+-   =.+.-.++.+-+.|-+.|+.+++.-|
T Consensus        68 ~~~i~e~~~kl~~~~~~r~yk~eYk~llk~y~~~~~~L~k~I~~~e  113 (126)
T PF09403_consen   68 YAEIEEKIEKLKQDSKVRWYKDEYKELLKKYKDLLNKLDKEIAEQE  113 (126)
T ss_dssp             HHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98887777776554321   13455566666666666666665544

; PDB: 3ETZ_B 3ETY_A 2GL2_B 3ETX_C 3ETW_A.

>PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription

Probab=91.61  E-value=5.6  Score=31.35  Aligned_cols=38  Identities=26%  Similarity=0.305  Sum_probs=20.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8908          98 PQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLE  135 (137)
Q Consensus        98 pyl~qID~Ie~~V~~LE~~a~~LD~Ysk~LE~K~k~le  135 (137)
                      .|-.++..++.++..++..+.+|..-...|+.|+..++
T Consensus        95 ~~e~~~~~l~~~~~~~~~~~~~l~~~l~~l~~kl~e~k  132 (221)
T PF04012_consen   95 DLEEQAERLEQQLDQAEAQVEKLKEQLEELEAKLEELK  132 (221)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444455555555555555555555555555555554

The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homologue in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma54-containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator [].

>PRK10698 phage shock protein PspA; Provisional

Probab=89.86  E-value=9.4  Score=30.98  Aligned_cols=39  Identities=13%  Similarity=0.180  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy8908          98 PQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEK  136 (137)
Q Consensus        98 pyl~qID~Ie~~V~~LE~~a~~LD~Ysk~LE~K~k~le~  136 (137)
                      .|-.+|..++.++...+..+.+|-.-..+|+.|+..+..
T Consensus        96 ~~~~~~~~l~~~~~~~~~~~~~L~~~l~~L~~ki~eak~  134 (222)
T PRK10698         96 KLTDLIATLEHEVTLVDETLARMKKEIGELENKLSETRA  134 (222)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            367888888888888888888888888888888887654

>KOG0980|consensus

Probab=88.50  E-value=6.5  Score=38.62  Aligned_cols=81  Identities=22%  Similarity=0.257  Sum_probs=63.8

Q ss_pred             cchhHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhh-hhhHhhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8908          54 STQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQL----EQIDQIYDSVLKLEQAAYKLDHYAKRLE  128 (137)
Q Consensus        54 ~t~~dy~LLE~mN~~~s~kY~~m~~~a~~l~~~~~~L-~ky~~l~pyl----~qID~Ie~~V~~LE~~a~~LD~Ysk~LE  128 (137)
                      .+..-++=+++++.+.-.+|.+++..-..+...=.+| .||......+    +-||+.++....|...+-+++.-..++|
T Consensus       407 ka~~~~ee~e~~~l~~e~ry~klkek~t~l~~~h~~lL~K~~di~kQle~~~~s~~~~~~~~~~L~d~le~~~~~~~~~~  486 (980)
T KOG0980|consen  407 KAQVLVEEAENKALAAENRYEKLKEKYTELRQEHADLLRKYDDIQKQLESAEQSIDDVEEENTNLNDQLEELQRAAGRAE  486 (980)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3443356678889999999999999999999998889 9998765544    5678888888888888888887777777


Q ss_pred             HHHHhh
Q psy8908         129 AKFKQL  134 (137)
Q Consensus       129 ~K~k~l  134 (137)
                      .|....
T Consensus       487 ~K~e~~  492 (980)
T KOG0980|consen  487 TKTESQ  492 (980)
T ss_pred             HhhHHH
Confidence            766544

>PF10398 DUF2443: Protein of unknown function (DUF2443); InterPro: IPR019469 This entry represents a small group of highly conserved proteins from bacteria, in particular Helicobacter species

Probab=88.38  E-value=3.2  Score=29.34  Aligned_cols=76  Identities=24%  Similarity=0.322  Sum_probs=54.2

Q ss_pred             HHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhhhhhHhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy8908          40 MFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARVPAYKQLIPQLEQIDQIYDSVLKLEQAAYK  119 (137)
Q Consensus        40 mf~kvs~Yl~~El~~t~~dy~LLE~mN~~~s~kY~~m~~~a~~l~~~~~~L~ky~~l~pyl~qID~Ie~~V~~LE~~a~~  119 (137)
                      ||+++-.-+. .++.+.++.++|=+|-+..-.-|.-++.-.-++-..+.           +.-.-||+++|.+|-+.++.
T Consensus         1 MFEkid~I~k-~IE~~~~eIe~LL~~AkiSl~DyImiKRGS~DmPe~l~-----------~~~~~QideeV~~LKe~Ida   68 (79)
T PF10398_consen    1 MFEKIDLILK-NIENAQEEIEILLKIAKISLVDYIMIKRGSQDMPEHLN-----------MAFLAQIDEEVEKLKEHIDA   68 (79)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHHT--HHHHHHHHTTSS---TTS------------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHH-HHHHHHHHHHHHHHHhhccHHHHHHhcccCCcCccccc-----------HHHHHHHHHHHHHHHHHHHH
Confidence            7888876654 68899999999999999999999988765444432221           12234677899999999999


Q ss_pred             HHHHHHHH
Q psy8908         120 LDHYAKRL  127 (137)
Q Consensus       120 LD~Ysk~L  127 (137)
                      |..|-+++
T Consensus        69 LNK~KkE~   76 (79)
T PF10398_consen   69 LNKIKKEL   76 (79)
T ss_dssp             HHHHHGGG
T ss_pred             HHHHHHHH
Confidence            99887653

The structure is a bundle of alpha helices. The function is not known. ; PDB: 1ZKE_F.

>PF15358 TSKS: Testis-specific serine kinase substrate

Probab=86.12  E-value=9.8  Score=34.83  Aligned_cols=108  Identities=19%  Similarity=0.198  Sum_probs=76.0

Q ss_pred             CcccCCCCCchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhh-hhhHhhHHH
Q psy8908          21 SSFEPMISHDPRLNELATNMFKKTADYLIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQ   99 (137)
Q Consensus        21 ~~~~~~~~~~~~l~~la~~mf~kvs~Yl~~El~~t~~dy~LLE~mN~~~s~kY~~m~~~a~~l~~~~~~L-~ky~~l~py   99 (137)
                      +...|..|+||++.++..-+-        +=|--+-+..--|..=-.....+...+.-.-..+..+++.= |-.++|+.|
T Consensus        97 ~pt~~w~~ddpDi~~~l~gvn--------SGLvrAKDSItSlKekt~~vnQHVq~LQseCsvlsEnLErrrQEaeELEgy  168 (558)
T PF15358_consen   97 SPTPPWAPDDPDITELLEGVN--------SGLVRAKDSITSLKEKTSRVNQHVQTLQSECSVLSENLERRRQEAEELEGY  168 (558)
T ss_pred             CCCCCCCCCCccHHHHHhhhc--------ccceecccchhhHHHhhHHHHHHHHHHHHHhHHHHHHHHhhhhHHHHHHHH
Confidence            445667778888877654322        11112222222233323445567777888888888888888 888999999


Q ss_pred             HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy8908         100 LEQID----QIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEK  136 (137)
Q Consensus       100 l~qID----~Ie~~V~~LE~~a~~LD~Ysk~LE~K~k~le~  136 (137)
                      ..|+.    .+..+|..-|.-++.|-+-+-.||.|++-|++
T Consensus       169 CsqLk~nCrkVt~SVedaEiKtnvLkqnS~~LEekLr~lq~  209 (558)
T PF15358_consen  169 CSQLKENCRKVTRSVEDAEIKTNVLKQNSALLEEKLRYLQQ  209 (558)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHhcccccchHHHHHHHHHHHH
Confidence            99876    47788888899999999999999999998764

>PRK11637 AmiB activator; Provisional

Probab=84.39  E-value=27  Score=30.43  Aligned_cols=78  Identities=12%  Similarity=0.126  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHH---HHHhhhHHHHHHHHHhhhhhh-hhhHhhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8908          58 DYEVLEKMNNAT---ITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQ----IDQIYDSVLKLEQAAYKLDHYAKRLEA  129 (137)
Q Consensus        58 dy~LLE~mN~~~---s~kY~~m~~~a~~l~~~~~~L-~ky~~l~pyl~q----ID~Ie~~V~~LE~~a~~LD~Ysk~LE~  129 (137)
                      |.++|+.+....   .....++......+......+ .....|+.-.++    ++.++.+....++.+.+|.+-.++|+.
T Consensus       168 d~~~l~~l~~~~~~L~~~k~~le~~~~~l~~~~~e~~~~k~~L~~~k~e~~~~l~~L~~~~~~~~~~l~~l~~~~~~L~~  247 (428)
T PRK11637        168 RQETIAELKQTREELAAQKAELEEKQSQQKTLLYEQQAQQQKLEQARNERKKTLTGLESSLQKDQQQLSELRANESRLRD  247 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444444322   222333333333334444444 333333333333    556666666666666666666666666


Q ss_pred             HHHhhh
Q psy8908         130 KFKQLE  135 (137)
Q Consensus       130 K~k~le  135 (137)
                      .+++++
T Consensus       248 ~I~~l~  253 (428)
T PRK11637        248 SIARAE  253 (428)
T ss_pred             HHHHHH
Confidence            665554

>PF10779 XhlA: Haemolysin XhlA; InterPro: IPR019715 Haemolysin XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes []

Probab=83.09  E-value=5.1  Score=26.89  Aligned_cols=32  Identities=19%  Similarity=0.287  Sum_probs=14.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8908         103 IDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQL  134 (137)
Q Consensus       103 ID~Ie~~V~~LE~~a~~LD~Ysk~LE~K~k~l  134 (137)
                      +|.+++.+..||..-..+|.-.+.+..+++++
T Consensus        15 l~~~~~~i~~lE~~~~~~e~~i~~~~~~l~~I   46 (71)
T PF10779_consen   15 LDNHEERIDKLEKRDAANEKDIKNLNKQLEKI   46 (71)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444444444444444444444444444444

>PF07195 FliD_C: Flagellar hook-associated protein 2 C-terminus; InterPro: IPR010809 The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria []

Probab=82.43  E-value=9.6  Score=30.69  Aligned_cols=71  Identities=18%  Similarity=0.294  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHhhhHHHHHH-------------HHHhhhhhh-hhhHh---------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy8908          63 EKMNNATITKYSDMKQITV-------------NISFSSARV-PAYKQ---------LIPQLEQIDQIYDSVLKLEQAAYK  119 (137)
Q Consensus        63 E~mN~~~s~kY~~m~~~a~-------------~l~~~~~~L-~ky~~---------l~pyl~qID~Ie~~V~~LE~~a~~  119 (137)
                      .+++.+....+..+...-.             |+...+.++ ..|-.         ...+=.+|+.|++++..+|.   +
T Consensus       139 ~kl~~Al~~np~~V~~lF~~~~~~~~~~~~~~Gi~~~l~~~l~~~~~~~~G~i~~~~~~l~~~~~~~~~~i~~~~~---r  215 (239)
T PF07195_consen  139 TKLDKALAENPDAVQALFAGDGTKDGTVYSTSGIATRLNDYLDSYTGSSTGSITSRIDSLNSQIKSLDKQIEDLEE---R  215 (239)
T ss_pred             HHHHHHHhhCHHHHHHHHccCccccccccccccHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHHHHHHHHH---H
Confidence            3455666666666666633             344444444 43332         23444566666666666654   5


Q ss_pred             HHHHHHHHHHHHHhhhh
Q psy8908         120 LDHYAKRLEAKFKQLEK  136 (137)
Q Consensus       120 LD~Ysk~LE~K~k~le~  136 (137)
                      |+.+-.+|..+|-+||.
T Consensus       216 l~~~~~~l~~qf~~me~  232 (239)
T PF07195_consen  216 LESKEERLRKQFSAMES  232 (239)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            77888888888888874

This alignment covers the C-terminal region of the flagellar hook-associated protein 2.; GO: 0007155 cell adhesion, 0009288 bacterial-type flagellum

>PRK09039 hypothetical protein; Validated

Probab=82.36  E-value=27  Score=30.06  Aligned_cols=89  Identities=12%  Similarity=0.074  Sum_probs=55.1

Q ss_pred             HhhhhhcchhHHHHHHHHHHHHHHHhh-------hHHHHHHHHHhhhhhh-hhhHh----hHHHHHHHHHHHHHHHHHHH
Q psy8908          48 LIGELSSTQADYEVLEKMNNATITKYS-------DMKQITVNISFSSARV-PAYKQ----LIPQLEQIDQIYDSVLKLEQ  115 (137)
Q Consensus        48 l~~El~~t~~dy~LLE~mN~~~s~kY~-------~m~~~a~~l~~~~~~L-~ky~~----l~pyl~qID~Ie~~V~~LE~  115 (137)
                      ++.++..-..+|.-++........-|.       .+..-+..+...+... ..|.+    +.-.-+||..+..++..||.
T Consensus        79 l~~~l~~l~~~l~~a~~~r~~Le~~~~~~~~~~~~~~~~~~~l~~~L~~~k~~~se~~~~V~~L~~qI~aLr~Qla~le~  158 (343)
T PRK09039         79 LQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEA  158 (343)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444444455555554444333333       4455556666666655 55554    55556788889999999988


Q ss_pred             HHHHHHHHHHHHHHHHHhhhh
Q psy8908         116 AAYKLDHYAKRLEAKFKQLEK  136 (137)
Q Consensus       116 ~a~~LD~Ysk~LE~K~k~le~  136 (137)
                      ....+..-.+....++..+++
T Consensus       159 ~L~~ae~~~~~~~~~i~~L~~  179 (343)
T PRK09039        159 ALDASEKRDRESQAKIADLGR  179 (343)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            888877777777777776654

>PF13094 CENP-Q: CENP-Q, a CENPA-CAD centromere complex subunit

Probab=80.74  E-value=9.1  Score=29.00  Aligned_cols=43  Identities=30%  Similarity=0.397  Sum_probs=37.4

Q ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy8908          94 KQLIPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEAKFKQLEK  136 (137)
Q Consensus        94 ~~l~pyl~qID~Ie~~V~~LE~~a~~LD~Ysk~LE~K~k~le~  136 (137)
                      ..|.+-+++|+.+++.+.+.|.+...--.|.++||.+.+.+++
T Consensus        34 ~qL~~~~~~l~lLq~e~~~~e~~le~d~~~L~~Le~~~~~~~~   76 (160)
T PF13094_consen   34 RQLAANLHQLELLQEEIEKEEAALERDYEYLQELEKNAKALER   76 (160)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456788899999999999999999999999999999888764

>PF07058 Myosin_HC-like: Myosin II heavy chain-like; InterPro: IPR009768 This family represents a conserved region within a number of myosin II heavy chain-like proteins that seem to be specific to Arabidopsis thaliana

Probab=80.46  E-value=13  Score=32.70  Aligned_cols=72  Identities=14%  Similarity=0.211  Sum_probs=63.2

Q ss_pred             HhhhhhcchhHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhh-hhhHhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy8908          48 LIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQIYDSVLKLEQAAYK  119 (137)
Q Consensus        48 l~~El~~t~~dy~LLE~mN~~~s~kY~~m~~~a~~l~~~~~~L-~ky~~l~pyl~qID~Ie~~V~~LE~~a~~  119 (137)
                      |.-++++-.++.++|++||+--.....++.+-+..|+..+-.= .-.+..+.|-.||-++-+.-..||-=..+
T Consensus        12 L~kQiEIcqEENkiLdK~hRQKV~EVEKLsqTi~ELEEaiLagGaaaNavrdYqrq~~elneEkrtLeRELAR   84 (351)
T PF07058_consen   12 LMKQIEICQEENKILDKMHRQKVLEVEKLSQTIRELEEAILAGGAAANAVRDYQRQVQELNEEKRTLERELAR   84 (351)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4568889999999999999999999999999999999888887 88888999999999999888888864433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	137
3mq9_A	471	Bone marrow stromal antigen 2 fused to maltose-BI	92.64
2ieq_A	109	S glycoprotein, spike glycoprotein, peplomer prote	92.06
2avr_X	119	Adhesion A; antiparallel helix-loop-helix, leucine	90.56
4dac_A	28	Computationally designed crystal forming protein;	86.79
3etw_A	119	Adhesin A; antiparallel helix-loop-helix, leucine	84.43
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	82.37
2l5g_B	42	Putative uncharacterized protein NCOR2, G protein	82.25

>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}

Probab=92.64  E-value=3.9  Score=34.02  Aligned_cols=26  Identities=8%  Similarity=0.105  Sum_probs=16.7

Q ss_pred             CCchHHHHHHHHHHHHHHHHHhhhhh
Q psy8908          28 SHDPRLNELATNMFKKTADYLIGELS   53 (137)
Q Consensus        28 ~~~~~l~~la~~mf~kvs~Yl~~El~   53 (137)
                      |..|...+..+.+...+..++.|+.+
T Consensus       345 p~~p~~~~~~~~~~~~~~~vl~G~~t  370 (471)
T 3mq9_A          345 PNIPQMSAFWYAVRTAVINAASGRQT  370 (471)
T ss_dssp             CCSTTHHHHHHHHHHHHHHHHHSSSC
T ss_pred             CCCccHHHHHHHHHHHHHHHHcCCCC
Confidence            34455555556666777888888754

>2ieq_A S glycoprotein, spike glycoprotein, peplomer protein, E2; membrane fusion, virus entry, six-HEL bundle, viral protein; 1.75A {Human coronavirus}

Probab=92.06  E-value=0.43  Score=34.57  Aligned_cols=61  Identities=7%  Similarity=0.077  Sum_probs=47.4

Q ss_pred             HHHHHhhhHHHHHHHHHhhhhhh-hhhH--------hhH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8908          68 ATITKYSDMKQITVNISFSSARV-PAYK--------QLI--------PQLEQIDQIYDSVLKLEQAAYKLDHYAKRLE  128 (137)
Q Consensus        68 ~~s~kY~~m~~~a~~l~~~~~~L-~ky~--------~l~--------pyl~qID~Ie~~V~~LE~~a~~LD~Ysk~LE  128 (137)
                      .++.-|.++.++++..++.+.+| ++|.        .++        .....||++|.+...|-.++.+|-.|...|-
T Consensus        26 tv~~Al~kiQdVVN~q~~aLs~ll~QLn~NF~A~s~~lq~~fn~t~lni~~elD~LEa~A~~l~~~~~elq~~idn~n  103 (109)
T 2ieq_A           26 TVTIALNKIQDVVNQQGSALNHLTSQLRHNFQSGGRGSGRGGNLTYLNLSSELKQLEAKTASLFQTTVELQGLIDQIN  103 (109)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            46677999999999999999998 6554        233        4456899999999999999999998876653

>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}

Probab=86.79  E-value=0.69  Score=25.62  Aligned_cols=19  Identities=53%  Similarity=0.739  Sum_probs=14.8

Q ss_pred             HHHHHHHHHHHHHHHHhhh
Q psy8908         117 AYKLDHYAKRLEAKFKQLE  135 (137)
Q Consensus       117 a~~LD~Ysk~LE~K~k~le  135 (137)
                      ||+||.-+|+||..+-++|
T Consensus         3 vykldanvkrlekevgkle   21 (28)
T 4dac_A            3 VYKLDANVKRLEKEVGKLE   21 (28)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             eeeccccHHHHHHHHhhhh
Confidence            6788888888888777765

>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A

Probab=84.43  E-value=9.8  Score=27.67  Aligned_cols=83  Identities=19%  Similarity=0.301  Sum_probs=64.3

Q ss_pred             HhhhhhcchhHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhh-hhhHhhHHHHHHHHH----------HHHHHHHHHHH
Q psy8908          48 LIGELSSTQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQIDQ----------IYDSVLKLEQA  116 (137)
Q Consensus        48 l~~El~~t~~dy~LLE~mN~~~s~kY~~m~~~a~~l~~~~~~L-~ky~~l~pyl~qID~----------Ie~~V~~LE~~  116 (137)
                      |.++++.--..|+.|++|=   ..+|.+-+..|..-...+... ..|+.+..-+..|-+          ....|.+++.+
T Consensus         7 i~~~l~~Leae~q~L~~~E---~qry~~eka~AE~A~~~La~~~~l~~~i~er~~~i~~~~~~~~yk~~y~~l~k~Y~~~   83 (119)
T 3etw_A            7 LVGELQALDAEYQNLANQE---EARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDA   83 (119)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Confidence            5677778888888888764   578999999999999999999 999999888888854          45566677777


Q ss_pred             HHHHHHHHHHHHHHHHh
Q psy8908         117 AYKLDHYAKRLEAKFKQ  133 (137)
Q Consensus       117 a~~LD~Ysk~LE~K~k~  133 (137)
                      ...||.=.+..+..+..
T Consensus        84 ~keLd~~ik~qekiIdn  100 (119)
T 3etw_A           84 LKKLEAEMEQQKAVISD  100 (119)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            77777766666655443

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=82.37  E-value=16  Score=34.74  Aligned_cols=76  Identities=9%  Similarity=0.070  Sum_probs=39.3

Q ss_pred             cchhHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhh-hhhHhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8908          54 STQADYEVLEKMNNATITKYSDMKQITVNISFSSARV-PAYKQLIPQLEQI-DQIYDSVLKLEQAAYKLDHYAKRLEA  129 (137)
Q Consensus        54 ~t~~dy~LLE~mN~~~s~kY~~m~~~a~~l~~~~~~L-~ky~~l~pyl~qI-D~Ie~~V~~LE~~a~~LD~Ysk~LE~  129 (137)
                      ...++++.++.=+...-.+-..+.+....+...+..+ .-+..++.-.++. ++++++|..|++....|.+-.-.||.
T Consensus       967 ~~l~~le~~~~e~~~~~~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~L~qq~~~l~~ 1044 (1080)
T 2dfs_A          967 SDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNR 1044 (1080)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3355555555555555555666666666666555555 4444444433222 34445555555555555544444443

>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}

Probab=82.25  E-value=3.7  Score=25.02  Aligned_cols=33  Identities=21%  Similarity=0.320  Sum_probs=27.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8908          97 IPQLEQIDQIYDSVLKLEQAAYKLDHYAKRLEA  129 (137)
Q Consensus        97 ~pyl~qID~Ie~~V~~LE~~a~~LD~Ysk~LE~  129 (137)
                      +..+|+||-|+..|++-|+-+..|-.--+.||.
T Consensus         5 ~~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLee   37 (42)
T 2l5g_B            5 EELIQNMDRVDREITMVEQQISKLKKKQQQLEE   37 (42)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            367899999999999999988888777777774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	137
d1zavu1	30	Ribosomal protein L7/12, oligomerisation (N-termin	82.54

>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
superfamily: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
family: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
domain: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.54  E-value=0.68  Score=24.83  Aligned_cols=23  Identities=30%  Similarity=0.488  Sum_probs=17.2

Q ss_pred             HHHHHHH-HHHHHHHHHHHHHHHH
Q psy8908         109 SVLKLEQ-AAYKLDHYAKRLEAKF  131 (137)
Q Consensus       109 ~V~~LE~-~a~~LD~Ysk~LE~K~  131 (137)
                      -|+.+|+ +|.+|-+.+|.||.||
T Consensus         6 iv~aiekltvaelaelvk~ledkf   29 (30)
T d1zavu1           6 IIEAIEKLTVSELAELVKKLEDKF   29 (30)
T ss_dssp             HHHHHHHSBHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhHHHHHHHHHHHHhhc
Confidence            3444444 4788999999999997