Psyllid ID: psy8911

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
DKVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWASKN
Secondary Structure (PSIPRED)
ccEEccccccEEEcccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHHHccccccEEEEcccccccccccccccEEEEEcccccHHHHHcccccHHHcccccccccccccccccccccccccccccEEEcccccEEEEEccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHcccccccccccEEEccccHHHHHHHHHHHccccccEEEEcccccccccccccccEEEEccccccHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cEEEEcccccEEccccHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHcccccHccEEEEcccccHHHHHHHHHHccccHHHEEEEcccHccHHHHHHccEEEEEEcccccHHHHHHHHHHHHHcccccccccccccccEEccccccccccccEEEEccccEEEccccHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHccccHHHEEEEcccHHcHHHHHHccEEEEEEcccccHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
dkvvdargahikyypdvpgILKYLKQNNCLVAAASRTSEIQGAQQLLDLFnwnqyfdhkqifpgqktthfanlkkatgieykdmvffddeernshdvsplGVTCILVEDGMTNAITLYGRSVFIISNHlskkldytlwplhvhdlvaPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINlnqyfsnkeiypgpktthfeslkkatgieykdmvffddeernshdvsplgvTCIHVKKGMSHAVLQKGLKQWASKN
Flexible Loop (DISEMBL)
dkvvdargahikyypdvpgILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWASKN
Low Complexity Region (SEG)
DKVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWASKN
Disordered region (IsUnstruct)
******RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQK*********
Disordered Region (DISOPRED)
DKVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQW****
Disordered Region (DISEMBL)
********AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWASKN
Disordered Region (DISPRO)
DKVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWASK*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DKVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWASKN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
Q86V88	176	Magnesium-dependent phosp	yes	N/A	0.517	0.823	0.510	1e-33
Q9D967	164	Magnesium-dependent phosp	yes	N/A	0.517	0.884	0.523	2e-33
O94279	172	Putative magnesium-depend	no	N/A	0.489	0.796	0.377	6e-18
P40081	178	Putative magnesium-depend	yes	N/A	0.45	0.707	0.284	7e-05

>sp|Q86V88|MGDP1_HUMAN Magnesium-dependent phosphatase 1 OS=Homo sapiens GN=MDP1 PE=1 SV=1

 Score =  143 bits (360), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/147 (51%), Positives = 96/147 (65%), Gaps = 2/147 (1%)

Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V  PF K     V D +G  ++ Y  VPE+L+ L+      AAASRT
Sbjct: 12  LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRT 71

Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
           SEI  A Q+L L +L +YF ++EIYPG K THFE L++ TGI +  M+FFDDE RN  DV
Sbjct: 72  SEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDV 131

Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
           S LGVTCIH++ GM+   L +GL+ +A
Sbjct: 132 SKLGVTCIHIQNGMNLQTLSQGLETFA 158

Magnesium-dependent phosphatase which may act as a tyrosine phosphatase.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8

>sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1 OS=Mus musculus GN=Mdp1 PE=1 SV=1

 Score =  142 bits (359), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/147 (52%), Positives = 92/147 (62%), Gaps = 2/147 (1%)

Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V  PF K     V D +G  I+ Y  VPE+L  L+     VAAASRT
Sbjct: 12  LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRT 71

Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
           SEI  A Q+L L +L +YF  +EIYPG K THFE L   TG+ +  MVFFDDE RN  DV
Sbjct: 72  SEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDV 131

Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
             LGVTCIH++ GMS   L +GL+ +A
Sbjct: 132 GRLGVTCIHIRDGMSLQTLTQGLETFA 158

Magnesium-dependent phosphatase which may act as a tyrosine phosphatase.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|O94279|MGDP1_SCHPO Putative magnesium-dependent phosphatase P8B7.31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP8B7.31 PE=1 SV=2

 Score = 91.7 bits (226), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 14/151 (9%)

Query: 133 LDYTLWPLHVHD-LVAPFKKIGQK---VMDAKGTLIKYYRGVPEILRYLKENKCLVAAAS 188
           LDYTLWPL +   + APFK        ++D  GT I +Y  +  IL+ L+  K  +  AS
Sbjct: 15  LDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYGTEICFYSDITGILQELRNQKVTLCVAS 74

Query: 189 RTSEILHAKQILNLINLN---------QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVF 239
           RT    +AKQ LNL+ +          ++F+  + +PG K  HF+ +   +GI+Y++MVF
Sbjct: 75  RTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAWPGSKMDHFKEIHNESGIDYREMVF 134

Query: 240 FDDEERNSHDVSPLGVTCIHVKKGMSHAVLQ 270
           FDDE RN  +V  LGVT +   K  S  +L 
Sbjct: 135 FDDESRN-REVERLGVTFLEKIKKNSLNILS 164

Magnesium-dependent phosphatase which may act as a tyrosine phosphatase.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|P40081|MGDP1_YEAST Putative magnesium-dependent phosphatase YER134C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YER134C PE=1 SV=1

 Score = 48.1 bits (113), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 25/151 (16%)

Query: 133 LDYTLWPL----HVHDLVAPFKKIGQKVMDA---KGTLIKYYRGVPEILRYLKENKCLVA 185
           LDYT+WP     H+H    P K    +V+      G  +  Y+ +P IL  LK+N   + 
Sbjct: 12  LDYTIWPCYCDTHLHGPFKPVKSSNGEVLTIICRDGYELTIYKDIPRILGDLKDNGVKLM 71

Query: 186 AASRTSEILHAKQIL---------------NLINLNQYFSNKEIYPGPKTTHFESLKKAT 230
            ASRT     A++IL               NL +  Q+    +I  G      + L   +
Sbjct: 72  TASRTWAPEIAQEILKIFKVKYAGVVTPLANLFDEFQWGERSKI--GHLRDGLKDLYNTS 129

Query: 231 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVK 261
            ++ K +  FDDE RN  +V   GV  ++V+
Sbjct: 130 DLKSKKICLFDDESRNK-EVEKYGVKFVYVR 159

Magnesium-dependent phosphatase which may act as a tyrosine phosphatase.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
350406224	159	PREDICTED: magnesium-dependent phosphata	0.514	0.905	0.551	2e-38
383855172	155	PREDICTED: magnesium-dependent phosphata	0.510	0.922	0.537	5e-35
156555324	162	PREDICTED: magnesium-dependent phosphata	0.525	0.907	0.510	5e-35
340716330	147	PREDICTED: magnesium-dependent phosphata	0.460	0.877	0.569	9e-35
417396395	164	Hypothetical protein [Desmodus rotundus]	0.517	0.884	0.517	1e-33
157823059	164	magnesium-dependent phosphatase 1 [Rattu	0.517	0.884	0.523	2e-32
443698977	166	hypothetical protein CAPTEDRAFT_148534 [	0.528	0.891	0.469	3e-32
345804214	164	PREDICTED: magnesium-dependent phosphata	0.517	0.884	0.496	4e-32
33457311	176	magnesium-dependent phosphatase 1 isofor	0.517	0.823	0.510	8e-32
254839198	187	Chain A, Crystal Structure Of Human Magn	0.517	0.775	0.510	9e-32

>gi|350406224|ref|XP_003487698.1| PREDICTED: magnesium-dependent phosphatase 1-like [Bombus impatiens]

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/145 (55%), Positives = 108/145 (74%), Gaps = 1/145 (0%)

Query: 133 LDYTLWPLHVHD-LVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS 191
           LDYTLWP  V   ++ PFKK G  V+D++G +I+YY+ VP++L++L E    +  ASRTS
Sbjct: 15  LDYTLWPFWVDTHVIPPFKKKGNDVVDSRGQIIQYYKEVPDVLKHLYEAGYELGVASRTS 74

Query: 192 EILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVS 251
           EI  AKQ+LNL N ++Y   KEIYPG K THF  ++KA+GI+YKDMVFFDDE+RN  DV 
Sbjct: 75  EIQGAKQLLNLFNWDKYLKYKEIYPGCKVTHFSKIQKASGIDYKDMVFFDDEDRNIVDVG 134

Query: 252 PLGVTCIHVKKGMSHAVLQKGLKQW 276
            LGVTCI VK G++HA+++  LK++
Sbjct: 135 KLGVTCIFVKNGVNHALVESLLKKF 159

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855172|ref|XP_003703091.1| PREDICTED: magnesium-dependent phosphatase 1-like [Megachile rotundata]

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 78/145 (53%), Positives = 101/145 (69%), Gaps = 2/145 (1%)

Query: 133 LDYTLWPLHVHDLVAP-FKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS 191
           LDYTLWP  V   V P FKK G  V+DA G +I+YY+ VP+IL+ L E   L   ASRTS
Sbjct: 12  LDYTLWPFWVDTHVTPPFKKKGNDVVDAHGQIIRYYKEVPDILKRLSEEYEL-GVASRTS 70

Query: 192 EILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVS 251
           EI  A Q+L L N ++YF  KEIYPG K +HF  ++KA+GI+YKDM+FFDDE RN  DV 
Sbjct: 71  EIQGANQLLKLFNWDKYFKYKEIYPGCKVSHFSKIQKASGIDYKDMIFFDDEHRNIVDVG 130

Query: 252 PLGVTCIHVKKGMSHAVLQKGLKQW 276
            LGVTCI V+ G+++ V++   K++
Sbjct: 131 KLGVTCILVQNGVTNTVIENAFKKF 155

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156555324|ref|XP_001603927.1| PREDICTED: magnesium-dependent phosphatase 1-like [Nasonia vitripennis]

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 76/149 (51%), Positives = 99/149 (66%), Gaps = 2/149 (1%)

Query: 133 LDYTLWPLHVHDLVAPFKKIGQ--KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V P  + GQ  K++DA G  ++YY   PEI + L E    +  ASRT
Sbjct: 13  LDYTLWPFWVDTHVTPPFRKGQNNKIVDAHGQTVRYYPHSPEIFKQLSEEGYEIGIASRT 72

Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
           SEI  A Q+L+L   N+Y   KEIYPG KTTHF  +K A+G+EYKDM+FFDDE+RN  D+
Sbjct: 73  SEIRGANQLLDLFGWNKYIKYKEIYPGTKTTHFSKIKNASGVEYKDMIFFDDEQRNISDL 132

Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWASK 279
           + +GV  I V+ G++H V+Q GL Q+A K
Sbjct: 133 TEVGVLSILVRNGVTHKVIQDGLNQFAKK 161

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716330|ref|XP_003396652.1| PREDICTED: magnesium-dependent phosphatase 1-like [Bombus terrestris]

 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 74/130 (56%), Positives = 96/130 (73%), Gaps = 1/130 (0%)

Query: 133 LDYTLWPLHVHD-LVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS 191
           LDYTLWP  V   ++ PFKK G  V+D++G +I+YY+ VP++L++L E    +  ASRTS
Sbjct: 15  LDYTLWPFWVDTHVIPPFKKKGNNVVDSRGQIIQYYKEVPDVLKHLYEEGYELGVASRTS 74

Query: 192 EILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVS 251
           EI  AKQ+LNL + ++Y   KEIYPG K THF  ++KA+GI+YKDMVFFDDE+RN  DV 
Sbjct: 75  EIQGAKQLLNLFDWDKYLKYKEIYPGCKVTHFSKIQKASGIDYKDMVFFDDEDRNIVDVG 134

Query: 252 PLGVTCIHVK 261
            LGVTCI VK
Sbjct: 135 KLGVTCIFVK 144

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|417396395|gb|JAA45231.1| Hypothetical protein [Desmodus rotundus]

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/147 (51%), Positives = 97/147 (65%), Gaps = 2/147 (1%)

Query: 133 LDYTLWPLHVHDLV-APFKKIGQK-VMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V  PF K   + V D +G  I+ Y  VPE+L   +     VAAASRT
Sbjct: 12  LDYTLWPFWVDTHVDPPFHKSSDRTVRDRRGQTIRLYPEVPEVLNRFRRLGVPVAAASRT 71

Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
            EI  A Q+L L +L++YF  +EIYPG K THFE L++ TG+ +  M+FFDDE+RN  DV
Sbjct: 72  GEIEGANQLLELFDLDRYFVQREIYPGSKVTHFERLRQKTGVPFSQMLFFDDEKRNIVDV 131

Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
           S LGVTCIHV+ GMS  +L +GL+ +A
Sbjct: 132 SKLGVTCIHVQNGMSLQILTQGLETFA 158

Source: Desmodus rotundus

Species: Desmodus rotundus

Genus: Desmodus

Family: Phyllostomidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|157823059|ref|NP_001099509.1| magnesium-dependent phosphatase 1 [Rattus norvegicus] gi|149063990|gb|EDM14260.1| similar to magnesium-dependent phosphatase-1 (predicted), isoform CRA_b [Rattus norvegicus]

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/147 (52%), Positives = 94/147 (63%), Gaps = 2/147 (1%)

Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V  PF K     V D +G  I+ Y  VPEIL  L+     VAAASRT
Sbjct: 12  LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDIRLYPEVPEILGRLQSLGVPVAAASRT 71

Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
           SEI  A Q+L L +L +YF  +EIYPG K THFE L+  TG+ +  M+FFDDE RN  DV
Sbjct: 72  SEIEGANQLLELFDLGKYFIQREIYPGSKVTHFERLRNKTGVPFSQMIFFDDENRNIIDV 131

Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
             LGVTCIH++ GMS  +L +GL+ +A
Sbjct: 132 GKLGVTCIHIQDGMSLQMLTQGLETFA 158

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|443698977|gb|ELT98686.1| hypothetical protein CAPTEDRAFT_148534 [Capitella teleta]

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 102/149 (68%), Gaps = 1/149 (0%)

Query: 133 LDYTLWPLHVHDLVAPFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS 191
           LD T+WP H+     PF+K    K++D  G  +K +  VP+IL+ LK +  ++ AASRT+
Sbjct: 17  LDCTMWPWHLDMSDPPFRKARDGKIVDRLGHKVKGFPDVPQILKTLKSDGYIIGAASRTT 76

Query: 192 EILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVS 251
           E+    Q+L+L+  ++Y S +EIYPG K THF++L+K+TGI +KDM+FFDDE RN  DVS
Sbjct: 77  ELEAGHQLLDLLGWDEYISFREIYPGQKMTHFKALQKSTGIAFKDMLFFDDEYRNIRDVS 136

Query: 252 PLGVTCIHVKKGMSHAVLQKGLKQWASKN 280
            LGVTC + + GMS+ VL+KG   ++  N
Sbjct: 137 KLGVTCFYCQDGMSNEVLKKGFALFSKNN 165

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|345804214|ref|XP_537388.3| PREDICTED: magnesium-dependent phosphatase 1-like [Canis lupus familiaris]

 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/147 (49%), Positives = 98/147 (66%), Gaps = 2/147 (1%)

Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V  PF +     V D +G  ++ Y  VP++L+ L++    VAAASRT
Sbjct: 12  LDYTLWPFWVDTHVDPPFHRSSDGAVRDRRGQAVRLYPEVPDVLQQLQDLDVPVAAASRT 71

Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
            EI  A Q+L L  L++YF ++EIYPG K THFE L++ TG+ +  M+FFDDE+RN  DV
Sbjct: 72  GEIEGANQLLELFGLDRYFVHREIYPGSKVTHFERLQQKTGVGFSQMIFFDDEKRNIVDV 131

Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
           S LGVTCIHV+ GM+   L +GL+ +A
Sbjct: 132 SKLGVTCIHVQNGMNLQTLTQGLETFA 158

Source: Canis lupus familiaris

Species: Canis lupus

Genus: Canis

Family: Canidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|33457311|ref|NP_612485.2| magnesium-dependent phosphatase 1 isoform 1 [Homo sapiens] gi|74727544|sp|Q86V88.1|MGDP1_HUMAN RecName: Full=Magnesium-dependent phosphatase 1; Short=MDP-1 gi|30410909|gb|AAH51382.1| Magnesium-dependent phosphatase 1 [Homo sapiens] gi|312151334|gb|ADQ32179.1| magnesium-dependent phosphatase 1 [synthetic construct]

 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 75/147 (51%), Positives = 96/147 (65%), Gaps = 2/147 (1%)

Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V  PF K     V D +G  ++ Y  VPE+L+ L+      AAASRT
Sbjct: 12  LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRT 71

Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
           SEI  A Q+L L +L +YF ++EIYPG K THFE L++ TGI +  M+FFDDE RN  DV
Sbjct: 72  SEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDV 131

Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
           S LGVTCIH++ GM+   L +GL+ +A
Sbjct: 132 SKLGVTCIHIQNGMNLQTLSQGLETFA 158

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|254839198|pdb|2WM8|A Chain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987)

 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 75/147 (51%), Positives = 96/147 (65%), Gaps = 2/147 (1%)

Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V  PF K     V D +G  ++ Y  VPE+L+ L+      AAASRT
Sbjct: 34  LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRT 93

Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
           SEI  A Q+L L +L +YF ++EIYPG K THFE L++ TGI +  M+FFDDE RN  DV
Sbjct: 94  SEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDV 153

Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
           S LGVTCIH++ GM+   L +GL+ +A
Sbjct: 154 SKLGVTCIHIQNGMNLQTLSQGLETFA 180

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
RGD|1311147	164	Mdp1 "magnesium-dependent phos	0.517	0.884	0.523	2.3e-32
MGI|MGI:1915131	164	Mdp1 "magnesium-dependent phos	0.517	0.884	0.523	6e-32
UNIPROTKB|Q86V88	176	MDP1 "Magnesium-dependent phos	0.517	0.823	0.510	7.7e-32
UNIPROTKB|F1MXF2	164	MDP-1 "Uncharacterized protein	0.503	0.859	0.517	1.3e-31
UNIPROTKB|F1SGN7	164	LOC100520440 "Uncharacterized	0.517	0.884	0.476	1.4e-30
UNIPROTKB|E9PL57	170	NEDD8-MDP1 "Protein NEDD8-MDP1	0.407	0.670	0.547	6.4e-28
ZFIN|ZDB-GENE-090311-51	160	si:dkeyp-27c8.2 "si:dkeyp-27c8	0.525	0.918	0.449	1e-27
UNIPROTKB|Q32PA3	127	MDP-1 "Uncharacterized protein	0.307	0.677	0.558	9e-22
ASPGD|ASPL0000029748	215	AN5512 [Emericella nidulans (t	0.207	0.269	0.586	8.9e-18
POMBASE|SPBP8B7.31	172	SPBP8B7.31 "acid phosphatase (	0.460	0.75	0.409	5.1e-19

RGD|1311147 Mdp1 "magnesium-dependent phosphatase 1" [Rattus norvegicus (taxid:10116)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 77/147 (52%), Positives = 94/147 (63%)

Query:   133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
             LDYTLWP  V   V  PF K     V D +G  I+ Y  VPEIL  L+     VAAASRT
Sbjct:    12 LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDIRLYPEVPEILGRLQSLGVPVAAASRT 71

Query:   191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
             SEI  A Q+L L +L +YF  +EIYPG K THFE L+  TG+ +  M+FFDDE RN  DV
Sbjct:    72 SEIEGANQLLELFDLGKYFIQREIYPGSKVTHFERLRNKTGVPFSQMIFFDDENRNIIDV 131

Query:   251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
               LGVTCIH++ GMS  +L +GL+ +A
Sbjct:   132 GKLGVTCIHIQDGMSLQMLTQGLETFA 158

GO:0005575 "cellular_component" evidence=ND

GO:0016311 "dephosphorylation" evidence=IDA

GO:0016791 "phosphatase activity" evidence=IDA

GO:0030389 "fructosamine metabolic process" evidence=IDA

MGI|MGI:1915131 Mdp1 "magnesium-dependent phosphatase 1" [Mus musculus (taxid:10090)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 77/147 (52%), Positives = 92/147 (62%)

Query:   133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
             LDYTLWP  V   V  PF K     V D +G  I+ Y  VPE+L  L+     VAAASRT
Sbjct:    12 LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRT 71

Query:   191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
             SEI  A Q+L L +L +YF  +EIYPG K THFE L   TG+ +  MVFFDDE RN  DV
Sbjct:    72 SEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDV 131

Query:   251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
               LGVTCIH++ GMS   L +GL+ +A
Sbjct:   132 GRLGVTCIHIRDGMSLQTLTQGLETFA 158

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016311 "dephosphorylation" evidence=ISO

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=ISO

GO:0030389 "fructosamine metabolic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q86V88 MDP1 "Magnesium-dependent phosphatase 1" [Homo sapiens (taxid:9606)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 75/147 (51%), Positives = 96/147 (65%)

Query:   133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
             LDYTLWP  V   V  PF K     V D +G  ++ Y  VPE+L+ L+      AAASRT
Sbjct:    12 LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRT 71

Query:   191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
             SEI  A Q+L L +L +YF ++EIYPG K THFE L++ TGI +  M+FFDDE RN  DV
Sbjct:    72 SEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDV 131

Query:   251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
             S LGVTCIH++ GM+   L +GL+ +A
Sbjct:   132 SKLGVTCIHIQNGMNLQTLSQGLETFA 158

GO:0046872 "metal ion binding" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|F1MXF2 MDP-1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 74/143 (51%), Positives = 93/143 (65%)

Query:   133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
             LDYTLWP  V   V  PF K     V D +G  I+ Y  VPE+L  L+     +AAASRT
Sbjct:    12 LDYTLWPFWVDTHVDPPFHKNSDGTVRDRRGQSIQLYPEVPEVLERLRGLGVPIAAASRT 71

Query:   191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
              E+  A Q+L L +L +YF ++EIYPG K THFE L++ TG+ +  M+FFDDE+RN  DV
Sbjct:    72 GEVEGANQLLELFDLVRYFVHREIYPGSKVTHFERLQRKTGVPFSQMIFFDDEKRNIVDV 131

Query:   251 SPLGVTCIHVKKGMSHAVLQKGL 273
             S LGVTCIHV+ GMS   L +GL
Sbjct:   132 SKLGVTCIHVQHGMSLQTLTQGL 154

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|F1SGN7 LOC100520440 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 70/147 (47%), Positives = 94/147 (63%)

Query:   133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
             LDYTLWP  V   V  PF K     + D +G  ++ Y  VPE+L  L+     VAAASRT
Sbjct:    12 LDYTLWPFWVDTHVDPPFHKSSDGTIRDRRGQTVRLYPEVPEVLERLQGLGVPVAAASRT 71

Query:   191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
              E+  A Q+L L +L ++F ++EIYPG K THFE L + TG+ +  M+FFDDE+RN  DV
Sbjct:    72 GEVEGANQLLELFDLVRHFVHREIYPGSKVTHFERLHRKTGVPFSQMIFFDDEKRNIVDV 131

Query:   251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
             S LGV C+HV+ GM+   L +GL+ +A
Sbjct:   132 SKLGVACVHVQNGMNLQTLTQGLEVFA 158

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|E9PL57 NEDD8-MDP1 "Protein NEDD8-MDP1" [Homo sapiens (taxid:9606)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 63/115 (54%), Positives = 82/115 (71%)

Query:     3 VVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIF 62
             V D RG  ++ YP+VP +LK L+      AAASRTSEI+GA QLL+LF+  +YF H++I+
Sbjct:    54 VRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY 113

Query:    63 PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITL 117
             PG K THF  L++ TGI +  M+FFDDE RN  DVS LGVTCI +++GM N  TL
Sbjct:   114 PGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGM-NLQTL 167

GO:0016791 "phosphatase activity" evidence=IEA

ZFIN|ZDB-GENE-090311-51 si:dkeyp-27c8.2 "si:dkeyp-27c8.2" [Danio rerio (taxid:7955)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 67/149 (44%), Positives = 93/149 (62%)

Query:   133 LDYTLWPLHVHDLV-APFKKIGQKVM-DAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
             LDYTLWP  V   V APF    + ++ D++   +  Y    +ILR L      +  ASRT
Sbjct:    11 LDYTLWPFWVDTHVQAPFHIDDEGIVKDSRREKVPIYHDTEKILRSLHSQGYKIGIASRT 70

Query:   191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
             SE   A Q+L+L NL+QY S KEIYPG K THF+ LK A+G+++ DM+FFDDEERN  +V
Sbjct:    71 SETEGANQLLSLYNLDQYISFKEIYPGSKVTHFKRLKSASGVQFSDMMFFDDEERNIVEV 130

Query:   251 SPLGVTCIHVKKGMSHAVLQKGLKQWASK 279
               LGVTC+ V   ++  ++   L+Q++ K
Sbjct:   131 GRLGVTCVLVFNAITCNLVNTALEQFSKK 159

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|Q32PA3 MDP-1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 48/86 (55%), Positives = 63/86 (73%)

Query:   188 SRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNS 247
             +RT E+  A Q+L L +L +YF ++EIYPG K THFE L++ TG+ +  M+FFDDE+RN 
Sbjct:    32 NRTGEVEGANQLLELFDLVRYFVHREIYPGSKVTHFERLQRKTGVPFSQMIFFDDEKRNI 91

Query:   248 HDVSPLGVTCIHVKKGMSHAVLQKGL 273
              DVS LGVTCIHV+ GMS   L +GL
Sbjct:    92 VDVSKLGVTCIHVQHGMSLQTLTQGL 117

GO:0016791 "phosphatase activity" evidence=IEA

ASPGD|ASPL0000029748 AN5512 [Emericella nidulans (taxid:162425)]

 Score = 182 (69.1 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
 Identities = 34/58 (58%), Positives = 44/58 (75%)

Query:    55 YFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112
             YFD+ QIFP  KT HF+ + +A+GI Y+DM+FFDDE RN +  + LGVT +LV DGMT
Sbjct:   133 YFDYIQIFPATKTQHFSRIHQASGIAYEDMLFFDDEARNRNVETELGVTFLLVRDGMT 190

GO:0008150 "biological_process" evidence=ND

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

POMBASE|SPBP8B7.31 SPBP8B7.31 "acid phosphatase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 59/144 (40%), Positives = 83/144 (57%)

Query:   133 LDYTLWPLHVHDLV-APFK--KIGQKVM-DAKGTLIKYYRGVPEILRYLKENKCLVAAAS 188
             LDYTLWPL +   V APFK  K    V+ D  GT I +Y  +  IL+ L+  K  +  AS
Sbjct:    15 LDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYGTEICFYSDITGILQELRNQKVTLCVAS 74

Query:   189 RTSEILHAKQILNLINLN---------QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVF 239
             RT    +AKQ LNL+ +          ++F+  + +PG K  HF+ +   +GI+Y++MVF
Sbjct:    75 RTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAWPGSKMDHFKEIHNESGIDYREMVF 134

Query:   240 FDDEERNSHDVSPLGVTCIH-VKK 262
             FDDE RN  +V  LGVT +  +KK
Sbjct:   135 FDDESRN-REVERLGVTFLEKIKK 157

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016791 "phosphatase activity" evidence=ISM

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9D967	MGDP1_MOUSE	3, ., 1, ., 3, ., 4, 8	0.5238	0.5178	0.8841	yes	N/A
Q86V88	MGDP1_HUMAN	3, ., 1, ., 3, ., 4, 8	0.5102	0.5178	0.8238	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	280
pfam12689	164	pfam12689, Acid_PPase, Acid Phosphatase	1e-61
pfam12689	164	pfam12689, Acid_PPase, Acid Phosphatase	1e-53
TIGR01685	174	TIGR01685, MDP-1, magnesium-dependent phosphatase-	6e-13
TIGR01685	174	TIGR01685, MDP-1, magnesium-dependent phosphatase-	7e-13
TIGR01681	128	TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatas	5e-06
TIGR01681	128	TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatas	1e-04
COG4996	164	COG4996, COG4996, Predicted phosphatase [General f	0.002

>gnl|CDD|221713 pfam12689, Acid_PPase, Acid Phosphatase

 Score =  192 bits (489), Expect = 1e-61
 Identities = 67/155 (43%), Positives = 91/155 (58%), Gaps = 8/155 (5%)

Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP      V  PFKK     V+D +G  +  Y  VP IL+ LKE    +A ASRT
Sbjct: 10  LDYTLWPFWCDTHVGPPFKKDKNGTVVDRRGEELSLYPDVPSILQELKEKGITIAVASRT 69

Query: 191 SEILHAKQILNLINLN------QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE 244
                A+++L L+++N       YF   EIYPG KTTHF+ + K +G+ Y DM+FFDDE 
Sbjct: 70  DAPDWARELLKLLHINDGPPAIDYFDYLEIYPGSKTTHFKKIHKKSGVPYSDMLFFDDES 129

Query: 245 RNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWASK 279
           RN   VS LGVT + V  G++    ++GL++W  +
Sbjct: 130 RNIDVVSRLGVTFVLVPDGLTREEFERGLRKWRKR 164

This family contains phosphatase enzymes and other proteins of the HAD superfamily. It includes MDP-1 which is a eukaryotic magnesium-dependent acid phosphatase. Length = 164

>gnl|CDD|221713 pfam12689, Acid_PPase, Acid Phosphatase

 Score =  171 bits (435), Expect = 1e-53
 Identities = 58/118 (49%), Positives = 74/118 (62%), Gaps = 6/118 (5%)

Query: 1   DKVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN------Q 54
             VVD RG  +  YPDVP IL+ LK+    +A ASRT     A++LL L + N       
Sbjct: 33  GTVVDRRGEELSLYPDVPSILQELKEKGITIAVASRTDAPDWARELLKLLHINDGPPAID 92

Query: 55  YFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112
           YFD+ +I+PG KTTHF  + K +G+ Y DM+FFDDE RN   VS LGVT +LV DG+T
Sbjct: 93  YFDYLEIYPGSKTTHFKKIHKKSGVPYSDMLFFDDESRNIDVVSRLGVTFVLVPDGLT 150

This family contains phosphatase enzymes and other proteins of the HAD superfamily. It includes MDP-1 which is a eukaryotic magnesium-dependent acid phosphatase. Length = 164

>gnl|CDD|233529 TIGR01685, MDP-1, magnesium-dependent phosphatase-1

 Score = 65.3 bits (159), Expect = 6e-13
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 20/166 (12%)

Query: 133 LDYTLWPLH-VHDLVAPFKKIGQK---VMDAKGTLIKYYRGVPEILRYLKENKCLVAAAS 188
           LD TLW  + +  L  PFK + Q    ++D  GT +   + V ++L+ LK+    +A AS
Sbjct: 9   LDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATAS 68

Query: 189 RTSEILHAKQILNL---------INLNQYFSNKEIYPGPKTT--HFESLKK--ATG---I 232
                  A +IL           + ++  F ++     P         L+K        +
Sbjct: 69  WNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVL 128

Query: 233 EYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWAS 278
           +   ++FFDD   N  +V   GVT  +   GM     +K L+ W S
Sbjct: 129 KPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDKGTFKKILEMWRS 174

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. Length = 174

>gnl|CDD|233529 TIGR01685, MDP-1, magnesium-dependent phosphatase-1

 Score = 65.3 bits (159), Expect = 7e-13
 Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 16/126 (12%)

Query: 3   VVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFN---------WN 53
           ++D  G  +    +V  +L+ LK     +A AS     + A ++L  F           +
Sbjct: 36  IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMH 95

Query: 54  QYFDHKQIFP-GQKTTHFANL------KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL 106
             FD +       K      +         + ++   ++FFDD   N  +V   GVT   
Sbjct: 96  SLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155

Query: 107 VEDGMT 112
              GM 
Sbjct: 156 CPSGMD 161

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. Length = 174

>gnl|CDD|233526 TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatase, subfamily IIIC

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 20/129 (15%)

Query: 133 LDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS- 191
           LD TLW             +G+  +      IK    + + L+ LK+N  L+A AS    
Sbjct: 7   LDNTLWTGE-------NIVVGEDPIIDLEVTIKE---IRDKLQTLKKNGFLLALASYNDD 56

Query: 192 -----EILHAKQILNLIN-LNQYFSN-KEIYPGPKT-THFESLKKATG-IEYKDMVFFDD 242
                E+L   +   +I  L +YF      Y  PK+    E   K  G ++ K ++F DD
Sbjct: 57  PHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKPKSILFVDD 116

Query: 243 EERNSHDVS 251
              N+ +V 
Sbjct: 117 RPDNNEEVD 125

This model represents the IIIC subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. Subfamily III (also including IIIA - TIGR01662 and IIIB - pfam03767) contains sequences which do not contain either of the insert domains (between the 1st and 2nd conserved catalytic motifs, subfamily I - TIGR01493, TIGR01509, TIGR01549, TIGR01488, TIGR01494, TIGR01658, TIGR01544 and TIGR01545, or between the 2nd and 3rd, subfamily II - TIGR01460 and TIGR01484). Subfamily IIIC contains five relatively distantly related clades: a family of viral proteins (TIGR01684), a family of eukaryotic proteins called MDP-1 and a family of archaeal proteins most closely related to MDP-1 (TIGR01685), a family of bacteria including the Streptomyces FkbH protein (TIGR01686), and a small clade including the Pasteurella BcbF and EcbF proteins. The overall lack of species overlap among these clades may indicate a conserved function, but the degree of divergence between the clades and the differences in archetecture outside of the domain in some clades warns against such a conclusion. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. Length = 128

>gnl|CDD|233526 TIGR01681, HAD-SF-IIIC, HAD-superfamily phosphatase, subfamily IIIC

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 14  YPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF------NW-NQYFDHKQIFP-GQ 65
             ++   L+ LK+N  L+A AS   +   A +LL +F          +YFD   I     
Sbjct: 31  IKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLP 90

Query: 66  KTTHFAN--LKKATGIEYKDMVFFDDEERNSHDVS 98
           K+       LK    ++ K ++F DD   N+ +V 
Sbjct: 91  KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVD 125

This model represents the IIIC subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. Subfamily III (also including IIIA - TIGR01662 and IIIB - pfam03767) contains sequences which do not contain either of the insert domains (between the 1st and 2nd conserved catalytic motifs, subfamily I - TIGR01493, TIGR01509, TIGR01549, TIGR01488, TIGR01494, TIGR01658, TIGR01544 and TIGR01545, or between the 2nd and 3rd, subfamily II - TIGR01460 and TIGR01484). Subfamily IIIC contains five relatively distantly related clades: a family of viral proteins (TIGR01684), a family of eukaryotic proteins called MDP-1 and a family of archaeal proteins most closely related to MDP-1 (TIGR01685), a family of bacteria including the Streptomyces FkbH protein (TIGR01686), and a small clade including the Pasteurella BcbF and EcbF proteins. The overall lack of species overlap among these clades may indicate a conserved function, but the degree of divergence between the clades and the differences in archetecture outside of the domain in some clades warns against such a conclusion. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. Length = 128

>gnl|CDD|227329 COG4996, COG4996, Predicted phosphatase [General function prediction only]

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 8/97 (8%)

Query: 2   KVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQI 61
            + D++G  +  +PDV   LK+ + +  ++  AS   E   A + L   +  QYF +  I
Sbjct: 31  TIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFE-DKAIKALRALDLLQYFHYIVI 89

Query: 62  FPG-------QKTTHFANLKKATGIEYKDMVFFDDEE 91
            P         +     N ++   I+  ++V+ DD  
Sbjct: 90  EPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRR 126

Length = 164

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	99.97
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.95
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.9
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.89
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.88
PRK13288	214	pyrophosphatase PpaX; Provisional	99.87
COG0546	220	Gph Predicted phosphatases [General function predi	99.86
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.86
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.85
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.85
PRK11587	218	putative phosphatase; Provisional	99.85
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.85
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.85
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.85
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.85
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.85
PLN02575	381	haloacid dehalogenase-like hydrolase	99.85
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.84
PRK06769	173	hypothetical protein; Validated	99.84
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.83
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.83
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.82
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.82
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.82
PLN02940	382	riboflavin kinase	99.82
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.81
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.8
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.8
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.79
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.79
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.79
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	99.79
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.78
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.78
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.77
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.77
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.76
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.76
PLN02645	311	phosphoglycolate phosphatase	99.76
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.76
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.75
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.75
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.75
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.75
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.74
PHA02597	197	30.2 hypothetical protein; Provisional	99.74
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.74
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.74
PRK13288	214	pyrophosphatase PpaX; Provisional	99.74
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.74
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.73
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.73
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.73
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.73
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.73
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.72
PLN02575	381	haloacid dehalogenase-like hydrolase	99.72
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.72
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.72
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.71
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.71
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.71
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.71
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.71
PRK11587	218	putative phosphatase; Provisional	99.71
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.71
COG0546	220	Gph Predicted phosphatases [General function predi	99.71
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.71
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.7
COG4996	164	Predicted phosphatase [General function prediction	99.7
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.7
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.7
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.7
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.7
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.7
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.7
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.7
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.69
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.69
PRK09449	224	dUMP phosphatase; Provisional	99.69
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.69
PRK06769	173	hypothetical protein; Validated	99.68
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.68
PLN02811	220	hydrolase	99.68
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.68
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.68
PRK09449	224	dUMP phosphatase; Provisional	99.68
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.68
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.67
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.67
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.67
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.67
PHA02530	300	pseT polynucleotide kinase; Provisional	99.67
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.66
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.66
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.66
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.66
PLN02940	382	riboflavin kinase	99.66
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.66
PLN02954	224	phosphoserine phosphatase	99.65
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.65
PLN02811	220	hydrolase	99.65
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.64
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.64
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.64
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.64
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.64
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.64
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.63
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.63
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.63
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.62
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.61
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.61
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.61
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.6
KOG2914|consensus	222		99.6
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.6
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.59
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.59
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.56
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.56
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.55
KOG3085|consensus	237		99.55
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.54
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.54
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.54
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.52
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.52
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.51
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.51
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.5
KOG3109|consensus	244		99.49
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.48
KOG3085|consensus	237		99.48
KOG2914|consensus	222		99.47
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.47
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.47
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.46
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.46
PHA02597	197	30.2 hypothetical protein; Provisional	99.45
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.43
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.43
PHA02530	300	pseT polynucleotide kinase; Provisional	99.42
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.38
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.38
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.38
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.38
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	99.37
KOG3109|consensus	244		99.37
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.37
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.37
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.36
PRK10444	248	UMP phosphatase; Provisional	99.35
PTZ00445	219	p36-lilke protein; Provisional	99.35
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.34
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	99.34
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.33
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.33
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	99.31
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.31
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.3
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.29
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.28
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.28
PLN02954	224	phosphoserine phosphatase	99.27
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.25
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.25
KOG4549|consensus	144		99.24
KOG2882|consensus	306		99.23
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.23
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.22
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.22
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.21
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.15
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.14
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.13
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.13
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	99.12
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.09
PRK08238	479	hypothetical protein; Validated	99.09
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	99.08
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.07
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.05
COG4229	229	Predicted enolase-phosphatase [Energy production a	99.04
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.03
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	99.01
COG4996	164	Predicted phosphatase [General function prediction	99.0
PHA03398	303	viral phosphatase superfamily protein; Provisional	99.0
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	98.99
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.99
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	98.98
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	98.95
PTZ00445	219	p36-lilke protein; Provisional	98.95
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	98.95
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	98.91
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.91
COG0241	181	HisB Histidinol phosphatase and related phosphatas	98.9
PLN02645	311	phosphoglycolate phosphatase	98.88
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	98.88
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.87
PRK01158	230	phosphoglycolate phosphatase; Provisional	98.84
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	98.83
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.82
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	98.81
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	98.8
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	98.79
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	98.79
KOG1615|consensus	227		98.78
COG4229	229	Predicted enolase-phosphatase [Energy production a	98.78
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.77
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	98.75
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	98.74
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	98.74
KOG3040|consensus	262		98.74
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.72
PRK08238	479	hypothetical protein; Validated	98.69
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.66
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.63
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	98.59
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.54
KOG3120|consensus	256		98.53
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.53
PRK10671	834	copA copper exporting ATPase; Provisional	98.52
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.49
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.45
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	98.42
PRK10671	834	copA copper exporting ATPase; Provisional	98.34
KOG4549|consensus	144		98.34
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	98.34
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	98.33
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	98.32
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.31
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	98.29
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	98.26
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.25
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.22
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.22
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	98.21
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	98.21
COG4087	152	Soluble P-type ATPase [General function prediction	98.21
KOG2630|consensus	254		98.19
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	98.17
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	98.09
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.07
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.06
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	98.06
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.05
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	98.05
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	98.04
PRK10444	248	UMP phosphatase; Provisional	98.04
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.04
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	98.03
PRK11590	211	hypothetical protein; Provisional	98.02
PRK10976	266	putative hydrolase; Provisional	97.99
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	97.97
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	97.96
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.94
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	97.94
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	97.93
PRK11590	211	hypothetical protein; Provisional	97.92
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.9
PRK10513	270	sugar phosphate phosphatase; Provisional	97.89
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.87
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.84
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.84
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	97.83
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	97.83
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.8
COG4359	220	Uncharacterized conserved protein [Function unknow	97.79
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.78
KOG3040|consensus	262		97.76
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.76
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	97.74
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	97.71
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	97.69
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	97.67
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.65
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	97.65
COG4359	220	Uncharacterized conserved protein [Function unknow	97.63
KOG1615|consensus	227		97.6
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.56
KOG2630|consensus	254		97.55
KOG3120|consensus	256		97.53
PLN02382	413	probable sucrose-phosphatase	97.53
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	97.52
COG3700	237	AphA Acid phosphatase (class B) [General function	97.45
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.41
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	97.37
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.36
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	97.35
PTZ00174	247	phosphomannomutase; Provisional	97.35
PLN02887	580	hydrolase family protein	97.34
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.34
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.33
PRK10513	270	sugar phosphate phosphatase; Provisional	97.32
PRK01122	679	potassium-transporting ATPase subunit B; Provision	97.32
PRK14010	673	potassium-transporting ATPase subunit B; Provision	97.32
COG4087	152	Soluble P-type ATPase [General function prediction	97.3
COG2503	274	Predicted secreted acid phosphatase [General funct	97.28
KOG2470|consensus	510		97.18
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	97.17
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.17
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	97.15
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	97.1
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	97.09
KOG2882|consensus	306		97.08
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	96.95
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	96.93
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	96.91
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	96.89
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	96.85
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	96.72
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	96.71
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	96.71
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	96.66
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	96.65
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	96.61
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	96.49
PRK15122	903	magnesium-transporting ATPase; Provisional	96.44
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	96.44
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	96.39
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	96.36
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	96.26
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	96.25
PRK01122	679	potassium-transporting ATPase subunit B; Provision	96.21
PRK14010	673	potassium-transporting ATPase subunit B; Provision	96.2
PLN03017	366	trehalose-phosphatase	96.18
COG5663	194	Uncharacterized conserved protein [Function unknow	96.14
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	96.11
PLN02423	245	phosphomannomutase	96.1
KOG2470|consensus	510		96.1
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	96.09
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	96.05
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	96.0
KOG0207|consensus	951		95.99
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	95.96
PLN02151	354	trehalose-phosphatase	95.96
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	95.9
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	95.84
PLN02580	384	trehalose-phosphatase	95.74
KOG0207|consensus	951		95.74
KOG2961|consensus	190		95.59
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	95.59
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	95.58
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	95.57
PRK01158	230	phosphoglycolate phosphatase; Provisional	95.54
KOG1605|consensus	262		95.52
PRK15122	903	magnesium-transporting ATPase; Provisional	95.5
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	95.49
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	95.39
PRK10976	266	putative hydrolase; Provisional	95.37
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	95.33
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	95.31
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	95.22
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	95.14
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	95.01
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	94.91
KOG2134|consensus	422		94.82
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	94.79
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	94.79
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	94.71
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	94.65
KOG2961|consensus	190		94.62
COG3700	237	AphA Acid phosphatase (class B) [General function	94.59
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	94.54
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	94.43
COG4030	315	Uncharacterized protein conserved in archaea [Func	94.43
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	94.34
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	94.34
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	94.34
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	94.17
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	93.94
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	93.92
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	93.91
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	93.66
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	93.48
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	93.41
PRK05752	255	uroporphyrinogen-III synthase; Validated	93.41
PRK08811	266	uroporphyrinogen-III synthase; Validated	93.3
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	93.24
PLN02887	580	hydrolase family protein	93.13
KOG3107|consensus	468		93.01
KOG2469|consensus	424		92.93
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	92.75
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	92.72
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	92.58
KOG3107|consensus	468		92.45
COG2503	274	Predicted secreted acid phosphatase [General funct	92.41
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	92.35
PLN02382	413	probable sucrose-phosphatase	92.22
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	92.13
COG4030	315	Uncharacterized protein conserved in archaea [Func	91.98
COG4850	373	Uncharacterized conserved protein [Function unknow	91.96
KOG2469|consensus	424		91.87
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	91.8
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	91.71
KOG0202|consensus	972		91.63
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	91.53
COG0731	296	Fe-S oxidoreductases [Energy production and conver	91.03
KOG0202|consensus	972		90.51
KOG3189|consensus	252		90.16
PRK05928	249	hemD uroporphyrinogen-III synthase; Reviewed	88.72
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	88.72
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	88.72
COG0731	296	Fe-S oxidoreductases [Energy production and conver	88.27
cd06578	239	HemD Uroporphyrinogen-III synthase (HemD) catalyze	87.68
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	87.08
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	86.45
KOG0323|consensus	635		85.98
KOG0323|consensus	635		85.14
PLN02423	245	phosphomannomutase	84.93
KOG3128|consensus	298		84.82
COG4850	373	Uncharacterized conserved protein [Function unknow	83.77
PRK12360	281	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	83.25
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	82.38
COG0761	294	lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate redu	82.36
PLN03190	1178	aminophospholipid translocase; Provisional	81.91
COG5663	194	Uncharacterized conserved protein [Function unknow	81.47
KOG3128|consensus	298		81.15

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=99.97  E-value=5e-31  Score=210.07  Aligned_cols=155  Identities=45%  Similarity=0.793  Sum_probs=123.8

Q ss_pred             cceeEEEecCCCCCCccccccc-CcccccC-C-eeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIG-Q-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN  201 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~-~-~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~  201 (280)
                      .|++++||||+|||++|++.+. +||.... . .+.+..+..+.+||++.++|+.|+++|++++++|.++.++.++.+|+
T Consensus         2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~   81 (169)
T PF12689_consen    2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLK   81 (169)
T ss_dssp             S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHH
T ss_pred             CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHH
Confidence            5899999999999999999999 9999887 4 79999999999999999999999999999999998768999999999


Q ss_pred             hCCCc----------cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHHHH
Q psy8911         202 LINLN----------QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQK  271 (280)
Q Consensus       202 ~~gl~----------~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~  271 (280)
                      .+++.          ++|+..++++++|..+|..+.++.|+++++++||+|..++++.+++.|+.|++|++|.+++.|++
T Consensus        82 ~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~  161 (169)
T PF12689_consen   82 LLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFER  161 (169)
T ss_dssp             HTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHH
T ss_pred             hcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHH
Confidence            99999          99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhc
Q psy8911         272 GLKQWASK  279 (280)
Q Consensus       272 ~~~~~~~~  279 (280)
                      +|+.|+++
T Consensus       162 gL~~~~~k  169 (169)
T PF12689_consen  162 GLEKFRKK  169 (169)
T ss_dssp             HHHHHHH-
T ss_pred             HHHHHhhC
Confidence            99999975

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.95  E-value=2.6e-27  Score=190.51  Aligned_cols=154  Identities=27%  Similarity=0.431  Sum_probs=131.9

Q ss_pred             cceeEEEecCCCCCCccccccc-CcccccC---CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHH
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIG---QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL  200 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l  200 (280)
                      +|++++||+|+|||+..+.+.. +|+....   +.+.+.....+.+|||+.++|+.|+++|++++|+||+.....++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L   80 (174)
T TIGR01685         1 LPRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEIL   80 (174)
T ss_pred             CCcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHH
Confidence            4789999999999999999988 7777433   56888999999999999999999999999999999874567788899


Q ss_pred             hhCCCc---------cccccceEecCC-CHHH----HHHHHHHc--CCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         201 NLINLN---------QYFSNKEIYPGP-KTTH----FESLKKAT--GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       201 ~~~gl~---------~~f~~~~~~~~~-k~~~----~~~~~~~~--~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      +.+++.         +||+.+.+...+ ++.+    +..+.+++  |++|++|+||||++.|+++|+++|+.++++++|.
T Consensus        81 ~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~  160 (174)
T TIGR01685        81 GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM  160 (174)
T ss_pred             HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence            999998         999987655442 2222    34444444  6999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHh
Q psy8911         265 SHAVLQKGLKQWAS  278 (280)
Q Consensus       265 ~~~~~~~~~~~~~~  278 (280)
                      ....+.+.++.||+
T Consensus       161 ~~~~~~~~~~~~~~  174 (174)
T TIGR01685       161 DKGTFKKILEMWRS  174 (174)
T ss_pred             cHHHHHHHHHHhcC
Confidence            99999999999984

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.90  E-value=2.6e-23  Score=177.70  Aligned_cols=206  Identities=12%  Similarity=0.026  Sum_probs=157.1

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHH--HHHhhcCccc-cccccceecCCChh--HHHHHHHHhCCCCccE
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQ--QLLDLFNWNQ-YFDHKQIFPGQKTT--HFANLKKATGIEYKDM   84 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~--~~l~~~~l~~-~fd~~~i~~~~~~~--~~~~~~~~~g~~p~~~   84 (280)
                      ...+|||+.++|++|+++|++++++||+++ ...+  ..++.+|+.. +|+  .|+++....  .++.+++++|++|++|
T Consensus        22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~-~~~~~~~~L~~~gl~~~~~~--~Ii~s~~~~~~~l~~~~~~~~~~~~~~   98 (242)
T TIGR01459        22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPR-NIFSLHKTLKSLGINADLPE--MIISSGEIAVQMILESKKRFDIRNGII   98 (242)
T ss_pred             CCccCccHHHHHHHHHHCCCEEEEEeCCCC-ChHHHHHHHHHCCCCccccc--eEEccHHHHHHHHHhhhhhccCCCceE
Confidence            457899999999999999999999999988 6665  6889999987 999  888887643  3777778899999999


Q ss_pred             EEEeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCcee
Q psy8911          85 VFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLI  164 (280)
Q Consensus        85 l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~  164 (280)
                      ++|||+..|++....+|...   ....         .+   +..++...|                         .. ..
T Consensus        99 ~~vGd~~~d~~~~~~~~~~~---~~~~---------~~---~~~vvv~~~-------------------------~~-~~  137 (242)
T TIGR01459        99 YLLGHLENDIINLMQCYTTD---DENK---------AN---ASLITIYRS-------------------------EN-EK  137 (242)
T ss_pred             EEeCCcccchhhhcCCCccc---cCCc---------cc---CcEEEEcCC-------------------------Cc-cc
Confidence            99999988877665444310   0000         00   111221111                         00 01


Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc-------eEecCCCHHHHHHHHHHcCCC-CCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-------EIYPGPKTTHFESLKKATGIE-YKD  236 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~-------~~~~~~k~~~~~~~~~~~~~~-~~~  236 (280)
                      .-|+++.++++.|+++|+++ |+||+ ........+.+++...+|..+       ....+|++..|+.++++++.. +++
T Consensus       138 ~~~~~~~~~l~~l~~~g~~~-i~tN~-d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~  215 (242)
T TIGR01459       138 LDLDEFDELFAPIVARKIPN-ICANP-DRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNR  215 (242)
T ss_pred             CCHHHHHHHHHHHHhCCCcE-EEECC-CEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCccc
Confidence            13689999999999999997 88999 676666667788877777643       123458889999999999975 679


Q ss_pred             EEEEeCC-cCCcccccccCceEEEEC
Q psy8911         237 MVFFDDE-ERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       237 ~l~igD~-~~di~~a~~aG~~~i~v~  261 (280)
                      |+||||+ .+|+.+|+++|+.+++|.
T Consensus       216 ~~~vGD~~~~Di~~a~~~G~~~i~v~  241 (242)
T TIGR01459       216 MLMVGDSFYTDILGANRLGIDTALVL  241 (242)
T ss_pred             EEEECCCcHHHHHHHHHCCCeEEEEe
Confidence            9999999 599999999999999985

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.89  E-value=3.6e-23  Score=177.41  Aligned_cols=108  Identities=13%  Similarity=0.234  Sum_probs=97.5

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.+||+.+.+..     +|+|+.|..+++++|++|++
T Consensus       105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~  183 (248)
T PLN02770        105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNA-PRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDH  183 (248)
T ss_pred             hcCCcCccHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhH
Confidence            35789999999999999999999999999 8999999999999999999865543     47789999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCCHHHHH
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQ  270 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~  270 (280)
                      |+||||++.|+++|+++|+.+|+|.+|.+.+.+.
T Consensus       184 ~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~  217 (248)
T PLN02770        184 TFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLM  217 (248)
T ss_pred             EEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHh
Confidence            9999999999999999999999999886655443

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.88  E-value=7.7e-23  Score=173.34  Aligned_cols=103  Identities=18%  Similarity=0.231  Sum_probs=93.2

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++||+.++|+.|+++|++++|+||+ ....+...++++|+.++|+.+....     +|+|+.|..+++++|++|++
T Consensus        92 ~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~  170 (229)
T PRK13226         92 TQSQLFDGVEGMLQRLECAGCVWGIVTNK-PEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTD  170 (229)
T ss_pred             hcCeeCCCHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhh
Confidence            34689999999999999999999999999 8888888999999999998754322     47789999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |+||||+.+|+++|+++|+.+|+|.+|..
T Consensus       171 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~  199 (229)
T PRK13226        171 CVYVGDDERDILAARAAGMPSVAALWGYR  199 (229)
T ss_pred             EEEeCCCHHHHHHHHHCCCcEEEEeecCC
Confidence            99999999999999999999999998763

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.87  E-value=2.9e-22  Score=168.07  Aligned_cols=107  Identities=16%  Similarity=0.172  Sum_probs=95.9

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....+...++.+|+.+||+.+...     .+|+++.|..++++++++|++
T Consensus        79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~-~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~  157 (214)
T PRK13288         79 ELVTEYETVYETLKTLKKQGYKLGIVTTK-MRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEE  157 (214)
T ss_pred             hhcccCcCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHH
Confidence            35679999999999999999999999999 888999999999999999976443     247889999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCC-HHHH
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS-HAVL  269 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~-~~~~  269 (280)
                      |+||||+.+|+++|+++|+++++|.+|.. ..++
T Consensus       158 ~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l  191 (214)
T PRK13288        158 ALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYL  191 (214)
T ss_pred             EEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHH
Confidence            99999999999999999999999998863 4444

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.86  E-value=2.8e-22  Score=168.91  Aligned_cols=101  Identities=18%  Similarity=0.250  Sum_probs=93.2

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcEE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      ..+|||+.++|..|+++|++++|+||+ ....++..++++|+.+||+.+..+.     +|+|..+..+++++|++|++++
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k-~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l  166 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNK-PERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL  166 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCC-cHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence            579999999999999999999999999 8999999999999999999765422     3667889999999999999999


Q ss_pred             EEeCCcCCcccccccCceEEEECCCCC
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      ||||+.+|+++|++||+.+++|.+|+.
T Consensus       167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~  193 (220)
T COG0546         167 MVGDSLNDILAAKAAGVPAVGVTWGYN  193 (220)
T ss_pred             EECCCHHHHHHHHHcCCCEEEEECCCC
Confidence            999999999999999999999999874

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.86  E-value=3.2e-22  Score=168.91  Aligned_cols=103  Identities=15%  Similarity=0.142  Sum_probs=91.8

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ .+..++..++++|+.+||+.+.++.     +|+|+.|..+++++|++|++
T Consensus        90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~  168 (224)
T PRK14988         90 PRAVLREDTVPFLEALKASGKRRILLTNA-HPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER  168 (224)
T ss_pred             ccCCcCCCHHHHHHHHHhCCCeEEEEeCc-CHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence            44789999999999999999999999999 8888999999999999999764432     47778999999999999999


Q ss_pred             EEEEeCCcCCcccccccCce-EEEECCCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVT-CIHVKKGMS  265 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~-~i~v~~g~~  265 (280)
                      |+||||++.|+++|+++||+ +++|+++.+
T Consensus       169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~~  198 (224)
T PRK14988        169 TLFIDDSEPILDAAAQFGIRYCLGVTNPDS  198 (224)
T ss_pred             EEEEcCCHHHHHHHHHcCCeEEEEEeCCCC
Confidence            99999999999999999997 577876653

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.85  E-value=1.5e-21  Score=154.15  Aligned_cols=124  Identities=14%  Similarity=0.081  Sum_probs=99.4

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-------------
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI-------------  193 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~-------------  193 (280)
                      +.++||+||||.+.....+            ......++++||+.++|+.|+++|++++|+||+ ..             
T Consensus         1 ~~~~~d~dgtl~~~~~~~~------------~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~-~~~~~~~~~~~~~~~   67 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSDY------------PRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQ-SGIGRGYFSAEAFRA   67 (147)
T ss_pred             CeEEEeCCCceeccCCccc------------CCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCC-CcccCCcCCHHHHHH
Confidence            3678999999987433211            123345689999999999999999999999998 52             


Q ss_pred             --HHHHHHHhhCCCcc--ccccce------EecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         194 --LHAKQILNLINLNQ--YFSNKE------IYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       194 --~~~~~~l~~~gl~~--~f~~~~------~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                        ..+...++++|+..  +|....      ...+|++++|+.++++++++|++|+||||+..|+++|+++||++|+++.|
T Consensus        68 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656        68 PNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             HHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence              46677889999872  222110      11358889999999999999999999999999999999999999999865

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.85  E-value=7.2e-22  Score=166.30  Aligned_cols=104  Identities=21%  Similarity=0.250  Sum_probs=95.0

Q ss_pred             CceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911         161 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       161 ~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~  235 (280)
                      ...++++||+.++|+.|+++|++++++|++ ++..++..|+.+|+.+||+.++..     ++|.|+.|+.+++++|++|+
T Consensus        82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s-~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~  160 (221)
T COG0637          82 LEGLKPIPGVVELLEQLKARGIPLAVASSS-PRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPE  160 (221)
T ss_pred             hcCCCCCccHHHHHHHHHhcCCcEEEecCC-hHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChH
Confidence            345789999999999999999999999999 888999999999999999975432     35888999999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +||.|+|++.++++|++|||.++.++.+.+
T Consensus       161 ~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~  190 (221)
T COG0637         161 ECVVVEDSPAGIQAAKAAGMRVVGVPAGHD  190 (221)
T ss_pred             HeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence            999999999999999999999999997554

>PRK11587 putative phosphatase; Provisional

Probab=99.85  E-value=1.2e-21  Score=164.91  Aligned_cols=103  Identities=14%  Similarity=0.031  Sum_probs=89.2

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....+...++..++. +|+.+.+.     .+|+|+.|..+++++|++|++
T Consensus        80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~-~~~~~~~~l~~~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~  157 (218)
T PRK11587         80 EGITALPGAIALLNHLNKLGIPWAIVTSG-SVPVASARHKAAGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQE  157 (218)
T ss_pred             cCceeCcCHHHHHHHHHHcCCcEEEEcCC-CchHHHHHHHhcCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCccc
Confidence            45789999999999999999999999999 777778888889984 55544332     247789999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCCH
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      |+||||+..|+++|+++||.+|+|+++...
T Consensus       158 ~l~igDs~~di~aA~~aG~~~i~v~~~~~~  187 (218)
T PRK11587        158 CVVVEDAPAGVLSGLAAGCHVIAVNAPADT  187 (218)
T ss_pred             EEEEecchhhhHHHHHCCCEEEEECCCCch
Confidence            999999999999999999999999877543

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.85  E-value=1.2e-21  Score=168.55  Aligned_cols=99  Identities=16%  Similarity=0.234  Sum_probs=91.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.+||+.+.++.     +|+|+.|..+++++|++|++|
T Consensus       107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~  185 (260)
T PLN03243        107 LYRLRPGSREFVQALKKHEIPIAVASTR-PRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERC  185 (260)
T ss_pred             CcccCCCHHHHHHHHHHCCCEEEEEeCc-CHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHe
Confidence            4678999999999999999999999999 8899999999999999999865433     477899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +||||+..|+++|+++||.+|+|..
T Consensus       186 l~IgDs~~Di~aA~~aG~~~i~v~g  210 (260)
T PLN03243        186 IVFGNSNSSVEAAHDGCMKCVAVAG  210 (260)
T ss_pred             EEEcCCHHHHHHHHHcCCEEEEEec
Confidence            9999999999999999999999973

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.85  E-value=1.2e-21  Score=169.66  Aligned_cols=103  Identities=17%  Similarity=0.291  Sum_probs=94.1

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC--CCHHHHHHHHHHcCCCCCcEEE
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG--PKTTHFESLKKATGIEYKDMVF  239 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~l~  239 (280)
                      ..++++||+.++|+.|+++|++++|+||+ ....++..++++|+.+||+.+.+...  +|++.+..++++++++|++|+|
T Consensus       139 ~~~~l~pg~~e~L~~L~~~gi~laIvSn~-~~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~  217 (273)
T PRK13225        139 PALQLFPGVADLLAQLRSRSLCLGILSSN-SRQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMY  217 (273)
T ss_pred             ccCCcCCCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEE
Confidence            45688999999999999999999999999 89999999999999999997644332  5788899999999999999999


Q ss_pred             EeCCcCCcccccccCceEEEECCCCC
Q psy8911         240 FDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       240 igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |||+..|+++|+++||.+|+|.+|..
T Consensus       218 IGDs~~Di~aA~~AG~~~I~v~~g~~  243 (273)
T PRK13225        218 VGDETRDVEAARQVGLIAVAVTWGFN  243 (273)
T ss_pred             ECCCHHHHHHHHHCCCeEEEEecCCC
Confidence            99999999999999999999998864

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.85  E-value=1e-21  Score=165.70  Aligned_cols=103  Identities=17%  Similarity=0.188  Sum_probs=94.0

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....++..++.+++.++|+.+.+.     .+|++++|+.+++++|++|++
T Consensus        89 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  167 (222)
T PRK10826         89 ETRPLLPGVREALALCKAQGLKIGLASAS-PLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLT  167 (222)
T ss_pred             cCCCCCCCHHHHHHHHHHCCCeEEEEeCC-cHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            35689999999999999999999999999 889999999999999999976543     347789999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |+||||+.+|+++|+++|+++|+++.+..
T Consensus       168 ~~~igDs~~Di~aA~~aG~~~i~v~~~~~  196 (222)
T PRK10826        168 CVALEDSFNGMIAAKAARMRSIVVPAPEQ  196 (222)
T ss_pred             eEEEcCChhhHHHHHHcCCEEEEecCCcc
Confidence            99999999999999999999999987653

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.85  E-value=4.4e-21  Score=161.50  Aligned_cols=102  Identities=18%  Similarity=0.309  Sum_probs=92.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....+...++++|+.+||+.+.+.+     +|+++.|..+++++|++|++|
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~  170 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDG-LPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA  170 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCC-chHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence            3579999999999999999999999999 8888889999999999999765432     477899999999999999999


Q ss_pred             EEEeCCc-CCcccccccCceEEEECCCCC
Q psy8911         238 VFFDDEE-RNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       238 l~igD~~-~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +||||++ +|+++|+++|+.+|++.++..
T Consensus       171 ~~igDs~~~di~~A~~aG~~~i~~~~~~~  199 (221)
T TIGR02253       171 VMVGDRLDKDIKGAKNLGMKTVWINQGKS  199 (221)
T ss_pred             EEECCChHHHHHHHHHCCCEEEEECCCCC
Confidence            9999998 899999999999999987754

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.85  E-value=1.7e-21  Score=163.02  Aligned_cols=102  Identities=19%  Similarity=0.273  Sum_probs=93.5

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.+....     +|+|+.|..+++++|++|++|
T Consensus        83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~  161 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKGLRLGLVTNK-PTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM  161 (213)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence            4689999999999999999999999999 8889999999999999999754432     477899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +||||+.+|+++|+++|+++++|.+|..
T Consensus       162 ~~igDs~~d~~aa~~aG~~~i~v~~g~~  189 (213)
T TIGR01449       162 VYVGDSRVDIQAARAAGCPSVLLTYGYR  189 (213)
T ss_pred             EEeCCCHHHHHHHHHCCCeEEEEccCCC
Confidence            9999999999999999999999988764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.85  E-value=1.7e-21  Score=173.96  Aligned_cols=105  Identities=13%  Similarity=0.162  Sum_probs=95.5

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++|+||+ .+..++..++++||.+||+.+....     +|++++|..+++++|++|++|
T Consensus       214 ~~~l~pGa~ElL~~Lk~~GiklaIaSn~-~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peec  292 (381)
T PLN02575        214 IYRLRTGSQEFVNVLMNYKIPMALVSTR-PRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERC  292 (381)
T ss_pred             CCCcCcCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccE
Confidence            4678999999999999999999999999 8999999999999999999865433     477899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCCCHHH
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGMSHAV  268 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~~~~~  268 (280)
                      +||||+..|+++|+++||++|+|.++.....
T Consensus       293 l~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~  323 (381)
T PLN02575        293 IVFGNSNQTVEAAHDARMKCVAVASKHPIYE  323 (381)
T ss_pred             EEEcCCHHHHHHHHHcCCEEEEECCCCChhH
Confidence            9999999999999999999999987654444

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.84  E-value=6.1e-21  Score=147.97  Aligned_cols=120  Identities=19%  Similarity=0.112  Sum_probs=97.9

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc--------HHHHHH
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE--------ILHAKQ  198 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~--------~~~~~~  198 (280)
                      +++.||+||||++....              ........++||+.++|+.|+++|++++|+||+ .        ...++.
T Consensus         1 k~~~~D~dgtL~~~~~~--------------~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~-~~~~~~~~~~~~~~~   65 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVPY--------------VDDEDERILYPEVPDALAELKEAGYKVVIVTNQ-SGIGRGKFSSGRVAR   65 (132)
T ss_pred             CEEEEeCCCceecCCCC--------------CCCHHHheeCCCHHHHHHHHHHCCCEEEEEECC-ccccccHHHHHHHHH
Confidence            46899999999962100              112234679999999999999999999999999 7        677888


Q ss_pred             HHhhCCCccccccceE-ecCCCHHHHHHHHHHc-CCCCCcEEEEeC-CcCCcccccccCceEEEEC
Q psy8911         199 ILNLINLNQYFSNKEI-YPGPKTTHFESLKKAT-GIEYKDMVFFDD-EERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       199 ~l~~~gl~~~f~~~~~-~~~~k~~~~~~~~~~~-~~~~~~~l~igD-~~~di~~a~~aG~~~i~v~  261 (280)
                      .++.+++..+|..... ..+|+++.|..+++++ +++|++++|||| +..|+.+|+++|+.+|+++
T Consensus        66 ~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662        66 RLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             HHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence            9999999744432111 2368889999999999 599999999999 7999999999999999985

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PRK06769 hypothetical protein; Validated

Probab=99.84  E-value=1e-20  Score=153.37  Aligned_cols=125  Identities=13%  Similarity=0.066  Sum_probs=101.1

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH--------HHH
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEIL--------HAK  197 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~--------~~~  197 (280)
                      .+.+.+|.||||-.....               .+...+.+|||+.++|++|+++|++++|+||+ ...        ...
T Consensus         4 ~~~~~~d~d~~~~~~~~~---------------~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~-~~~~~~~~~~~~~~   67 (173)
T PRK06769          4 IQAIFIDRDGTIGGDTTI---------------HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQ-PGIADGIATIADFV   67 (173)
T ss_pred             CcEEEEeCCCcccCCCCC---------------CCHHHeEECCCHHHHHHHHHHCCCEEEEEECC-chhcCCcCCHHHHH
Confidence            368899999999431000               12245789999999999999999999999998 531        234


Q ss_pred             HHHhhCCCccccccceE------ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCH
Q psy8911         198 QILNLINLNQYFSNKEI------YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       198 ~~l~~~gl~~~f~~~~~------~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      ..++.+|+.++|.....      ..+|+++.|.+++++++++|++|+||||++.|+++|+++|+++|+|.+|...
T Consensus        68 ~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~  142 (173)
T PRK06769         68 QELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGY  142 (173)
T ss_pred             HHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCc
Confidence            45888999888764321      2368889999999999999999999999999999999999999999987643

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.83  E-value=1e-20  Score=159.20  Aligned_cols=106  Identities=15%  Similarity=0.129  Sum_probs=94.3

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc--cccccceEec-----CCCHHHHHHHHHHcCCC-C
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNKEIYP-----GPKTTHFESLKKATGIE-Y  234 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~--~~f~~~~~~~-----~~k~~~~~~~~~~~~~~-~  234 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++++|+.  +||+.+.+..     +|+|+.|..++++++++ |
T Consensus        85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~-~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~  163 (220)
T TIGR03351        85 PPVALPGAEEAFRSLRSSGIKVALTTGF-DRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV  163 (220)
T ss_pred             CCccCCCHHHHHHHHHHCCCEEEEEeCC-chHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence            4579999999999999999999999999 899999999999999  9999764432     37889999999999997 7


Q ss_pred             CcEEEEeCCcCCcccccccCceE-EEECCCC-CHHHH
Q psy8911         235 KDMVFFDDEERNSHDVSPLGVTC-IHVKKGM-SHAVL  269 (280)
Q Consensus       235 ~~~l~igD~~~di~~a~~aG~~~-i~v~~g~-~~~~~  269 (280)
                      ++|+||||++.|+++|+++||.+ +++.+|. +...+
T Consensus       164 ~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~  200 (220)
T TIGR03351       164 QSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEEL  200 (220)
T ss_pred             hHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHH
Confidence            99999999999999999999999 9998876 33334

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.83  E-value=4.3e-20  Score=150.97  Aligned_cols=127  Identities=15%  Similarity=0.023  Sum_probs=100.0

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-----------
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI-----------  193 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~-----------  193 (280)
                      |.|.+.||+||||.-.. .            .+......+.++||+.++|++|+++|++++|+||+ ..           
T Consensus         2 ~~~~~~~d~~~t~~~~~-~------------~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~-~~~~~~~~~~~~~   67 (181)
T PRK08942          2 SMKAIFLDRDGVINVDS-D------------GYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQ-SGIARGLFTEAQL   67 (181)
T ss_pred             CccEEEEECCCCcccCC-c------------cccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCC-ccccCCcCCHHHH
Confidence            56899999999985321 1            11233446789999999999999999999999999 52           


Q ss_pred             ----HHHHHHHhhCCCccccccceE----------ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         194 ----LHAKQILNLINLNQYFSNKEI----------YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       194 ----~~~~~~l~~~gl~~~f~~~~~----------~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                          ......++++|+  +|+.+..          ..+|++..|..+++++|++|++|+||||+.+|+++|+++|+.+++
T Consensus        68 ~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~  145 (181)
T PRK08942         68 NALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVL  145 (181)
T ss_pred             HHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEE
Confidence                334456777776  2443211          235788999999999999999999999999999999999999999


Q ss_pred             ECCCCCHH
Q psy8911         260 VKKGMSHA  267 (280)
Q Consensus       260 v~~g~~~~  267 (280)
                      +.+|....
T Consensus       146 v~~g~~~~  153 (181)
T PRK08942        146 VRTGKGVT  153 (181)
T ss_pred             EcCCCCch
Confidence            99886543

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.82  E-value=3.8e-20  Score=150.58  Aligned_cols=122  Identities=15%  Similarity=0.079  Sum_probs=96.2

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-------------
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI-------------  193 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~-------------  193 (280)
                      +++.||.||||......              ......+.++||+.++|++|+++|++++|+||+ ..             
T Consensus         2 ~~~~~D~Dgtl~~~~~~--------------~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~-~~~~~~~~~~~~~~~   66 (176)
T TIGR00213         2 KAIFLDRDGTINIDHGY--------------VHEIDNFEFIDGVIDALRELKKMGYALVLVTNQ-SGIARGYFTEAQFEQ   66 (176)
T ss_pred             CEEEEeCCCCEeCCCCC--------------CCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCC-ccccCCcCCHHHHHH
Confidence            57889999999742110              022346789999999999999999999999999 53             


Q ss_pred             --HHHHHHHhhCCCccccccceE----------------ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCc
Q psy8911         194 --LHAKQILNLINLNQYFSNKEI----------------YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGV  255 (280)
Q Consensus       194 --~~~~~~l~~~gl~~~f~~~~~----------------~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~  255 (280)
                        ......++.+++.  |+.+..                ..+|++++|..++++++++|++|+||||+.+|+++|+++|+
T Consensus        67 ~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~  144 (176)
T TIGR00213        67 LTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKV  144 (176)
T ss_pred             HHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCC
Confidence              3444567766665  332111                13588899999999999999999999999999999999999


Q ss_pred             eE-EEECCCCC
Q psy8911         256 TC-IHVKKGMS  265 (280)
Q Consensus       256 ~~-i~v~~g~~  265 (280)
                      .+ ++|.+|..
T Consensus       145 ~~~i~v~~g~~  155 (176)
T TIGR00213       145 KTNVLVRTGKP  155 (176)
T ss_pred             cEEEEEecCCc
Confidence            98 79988864

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.82  E-value=1.4e-20  Score=163.31  Aligned_cols=102  Identities=20%  Similarity=0.331  Sum_probs=92.3

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++++++..||+.+....     +|+++.|+.+++++|++|++|
T Consensus        99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~-~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~  177 (272)
T PRK13223         99 LTVVYPGVRDTLKWLKKQGVEMALITNK-PERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS  177 (272)
T ss_pred             CCccCCCHHHHHHHHHHCCCeEEEEECC-cHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE
Confidence            3568999999999999999999999999 8888899999999999999754432     467788999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +||||+.+|+++|+++||++++|.+|+.
T Consensus       178 l~IGD~~~Di~aA~~aGi~~i~v~~G~~  205 (272)
T PRK13223        178 LFVGDSRSDVLAAKAAGVQCVALSYGYN  205 (272)
T ss_pred             EEECCCHHHHHHHHHCCCeEEEEecCCC
Confidence            9999999999999999999999998763

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.82  E-value=8.7e-20  Score=145.84  Aligned_cols=132  Identities=18%  Similarity=0.147  Sum_probs=105.0

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC--------------c
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS--------------E  192 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~--------------~  192 (280)
                      +.+.||.||||++.....           ........+.+|||+.++|++|+++|++++|+||+.              .
T Consensus         2 ~~~~~d~dg~l~~~~~~~-----------~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~   70 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPSD-----------FQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGP   70 (161)
T ss_pred             CEEEEeCCCCccccCCCc-----------cccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHH
Confidence            567899999998632111           111233467899999999999999999999999962              2


Q ss_pred             HHHHHHHHhhCCCccccccceEe----------cCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         193 ILHAKQILNLINLNQYFSNKEIY----------PGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       193 ~~~~~~~l~~~gl~~~f~~~~~~----------~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      ...+...++++|+.  |+.+.++          .+|+++.+..++++++++|++|+||||+..|+++|+++|+++++++.
T Consensus        71 ~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~  148 (161)
T TIGR01261        71 HNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDE  148 (161)
T ss_pred             HHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEECh
Confidence            44678889999997  6533221          14788999999999999999999999999999999999999999986


Q ss_pred             C-CCHHHHHH
Q psy8911         263 G-MSHAVLQK  271 (280)
Q Consensus       263 g-~~~~~~~~  271 (280)
                      + .+|+...+
T Consensus       149 ~~~~~~~~~~  158 (161)
T TIGR01261       149 EELNWDMIAE  158 (161)
T ss_pred             hhcCHHHHHH
Confidence            4 57877543

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PLN02940 riboflavin kinase

Probab=99.82  E-value=1.1e-20  Score=171.10  Aligned_cols=103  Identities=17%  Similarity=0.126  Sum_probs=92.8

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh-hCCCccccccceEec-----CCCHHHHHHHHHHcCCCCC
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN-LINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~-~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~  235 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....++..++ ++|+.+||+.+.+.+     +|+++.|..+++++|++|+
T Consensus        90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~-~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~  168 (382)
T PLN02940         90 CNIKALPGANRLIKHLKSHGVPMALASNS-PRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS  168 (382)
T ss_pred             ccCCCCcCHHHHHHHHHHCCCcEEEEeCC-cHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh
Confidence            35679999999999999999999999999 8888888887 799999999865432     4778999999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|+||||+..|+++|+++||.+|+|+++..
T Consensus       169 ~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~  198 (382)
T PLN02940        169 NCLVIEDSLPGVMAGKAAGMEVIAVPSIPK  198 (382)
T ss_pred             HEEEEeCCHHHHHHHHHcCCEEEEECCCCc
Confidence            999999999999999999999999998653

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.81  E-value=5.8e-20  Score=141.59  Aligned_cols=116  Identities=24%  Similarity=0.327  Sum_probs=93.1

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC--
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN--  204 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g--  204 (280)
                      ++++||+|||||+........      ..+.+..    ++|||+.++|+.|+++|++++|+||++.+..+...+++++  
T Consensus         1 kli~~DlD~Tl~~~~~~~~~~------~~~~~~~----~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~   70 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVGE------DPIIDLE----VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDF   70 (128)
T ss_pred             CEEEEeCCCCCCCCCcccccC------CcchhhH----HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcccc
Confidence            468999999999864321100      0000000    6899999999999999999999999955777888899998  


Q ss_pred             -----CccccccceEe-cCCCHHHHHHHHHHcC--CCCCcEEEEeCCcCCcccccc
Q psy8911         205 -----LNQYFSNKEIY-PGPKTTHFESLKKATG--IEYKDMVFFDDEERNSHDVSP  252 (280)
Q Consensus       205 -----l~~~f~~~~~~-~~~k~~~~~~~~~~~~--~~~~~~l~igD~~~di~~a~~  252 (280)
                           +.++|+.+.++ ..|++++|..+++++|  ++|++|+||||++.|+++.++
T Consensus        71 ~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681        71 GIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             ccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence                 89999976554 4588999999999999  999999999999999887664

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.80  E-value=2.7e-19  Score=155.99  Aligned_cols=225  Identities=15%  Similarity=0.120  Sum_probs=146.1

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCch--HHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEI--QGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDD   89 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D   89 (280)
                      .++||+.++|+.|+++|++++++||++..  ......++.+|+..-.+  .++++...  ....+++.+..+..++++|+
T Consensus        18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~--~i~ts~~~--~~~~l~~~~~~~~~v~~iG~   93 (279)
T TIGR01452        18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAE--QLFSSALC--AARLLRQPPDAPKAVYVIGE   93 (279)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh--hEecHHHH--HHHHHHhhCcCCCEEEEEcC
Confidence            58999999999999999999999997641  22224567778754444  66665544  22333343344577999998


Q ss_pred             CcccccccccCCCeEEEEcCCCchhhhhcc---ccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceecc
Q psy8911          90 EERNSHDVSPLGVTCILVEDGMTNAITLYG---RSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKY  166 (280)
Q Consensus        90 ~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~---~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (280)
                      .. -.+..+..|+..+.-............   .....-+..++...|                           . --.
T Consensus        94 ~~-~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvv~~d---------------------------~-~~~  144 (279)
T TIGR01452        94 EG-LRAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVGAVVVGYD---------------------------E-HFS  144 (279)
T ss_pred             HH-HHHHHHHCCCEEecCcccccccchhhcccccccCCCCCEEEEecC---------------------------C-CCC
Confidence            52 234456678775532211110000000   000000111122111                           1 234


Q ss_pred             CCCHHHHHHHHhhCCcEEEEEcCCCcHHHH-HHHHhhCCCccccccce--------EecCCCHHHHHHHHHHcCCCCCcE
Q psy8911         167 YRGVPEILRYLKENKCLVAAASRTSEILHA-KQILNLINLNQYFSNKE--------IYPGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       167 ~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~-~~~l~~~gl~~~f~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      |+++.++++.|+++|+ ++|+||+ ..... ...+...++..+|+.+.        ...+|.+..|..++++++++|++|
T Consensus       145 y~~i~~~l~~L~~~g~-~~i~Tn~-d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~  222 (279)
T TIGR01452       145 YAKLREACAHLREPGC-LFVATNR-DPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART  222 (279)
T ss_pred             HHHHHHHHHHHhcCCC-EEEEeCC-CCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence            8999999999999987 8999999 54332 22334556667766431        123578889999999999999999


Q ss_pred             EEEeCCc-CCcccccccCceEEEECCCCC-HHHHHH
Q psy8911         238 VFFDDEE-RNSHDVSPLGVTCIHVKKGMS-HAVLQK  271 (280)
Q Consensus       238 l~igD~~-~di~~a~~aG~~~i~v~~g~~-~~~~~~  271 (280)
                      +||||++ .||++|+++||++++|.+|.. ..+++.
T Consensus       223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~  258 (279)
T TIGR01452       223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQE  258 (279)
T ss_pred             EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHh
Confidence            9999995 899999999999999999974 555543

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.80  E-value=1.5e-19  Score=145.56  Aligned_cols=118  Identities=23%  Similarity=0.346  Sum_probs=99.2

Q ss_pred             ccccCCCcceecCCHHHHHHHHHHCCceEEEecCC-CchHHHHHHHhhcCcc---------ccccccceecCCChhH---
Q psy8911           3 VVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRT-SEIQGAQQLLDLFNWN---------QYFDHKQIFPGQKTTH---   69 (280)
Q Consensus         3 ~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~-~~~~~~~~~l~~~~l~---------~~fd~~~i~~~~~~~~---   69 (280)
                      +.+.....+.+|||+.++|+.|+++|++++|+||+ +. ..++..++.+++.         ++|+  .++++++...   
T Consensus        36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~-~~~~~~L~~~~l~~~~~~~~~~~~Fd--~iv~~~~~~~~kp  112 (174)
T TIGR01685        36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVP-EWAYEILGTFEITYAGKTVPMHSLFD--DRIEIYKPNKAKQ  112 (174)
T ss_pred             EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCCh-HHHHHHHHhCCcCCCCCcccHHHhce--eeeeccCCchHHH
Confidence            56778888999999999999999999999999999 77 8889999999998         9999  7776654322   


Q ss_pred             ----HHHHHHHh--CCCCccEEEEeCCcccccccccCCCeEEEEcCCCchhhhhcccccc
Q psy8911          70 ----FANLKKAT--GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVF  123 (280)
Q Consensus        70 ----~~~~~~~~--g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~  123 (280)
                          ++.+.+.+  |++|++|+||||++.|+++|+++|+.+++++++.....+.+.+.+|
T Consensus       113 ~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~  172 (174)
T TIGR01685       113 LEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDKGTFKKILEMW  172 (174)
T ss_pred             HHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCccHHHHHHHHHHh
Confidence                33333444  6999999999999999999999999999999988777766655444

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.79  E-value=1.9e-19  Score=154.36  Aligned_cols=105  Identities=10%  Similarity=0.234  Sum_probs=93.9

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p   81 (280)
                      ..+++|||+.++|+.|+++|++++|+||++. ..++..++.+++.+||+  .+++++++       ..|+.+++++|++|
T Consensus       105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~-~~~~~~l~~~gl~~~Fd--~iv~~~~~~~~KP~p~~~~~a~~~~~~~~  181 (248)
T PLN02770        105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPR-ENAELMISLLGLSDFFQ--AVIIGSECEHAKPHPDPYLKALEVLKVSK  181 (248)
T ss_pred             hcCCcCccHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHcCChhhCc--EEEecCcCCCCCCChHHHHHHHHHhCCCh
Confidence            4578999999999999999999999999999 89999999999999999  77766432       34999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCCchhhh
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAIT  116 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~  116 (280)
                      ++|+||||+..|+++|+++|+.+|++.++.....+
T Consensus       182 ~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l  216 (248)
T PLN02770        182 DHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLL  216 (248)
T ss_pred             hHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHH
Confidence            99999999999999999999999999876544433

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.79  E-value=1e-19  Score=149.35  Aligned_cols=96  Identities=17%  Similarity=0.262  Sum_probs=86.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++|+ .++|+.|+++ ++++|+||+ ....++..++++|+.+||+.+.+.+     +|+|+.|..++++++++|++|
T Consensus        86 ~~~~~~~-~e~L~~L~~~-~~l~I~T~~-~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~  162 (188)
T PRK10725         86 SVEPLPL-IEVVKAWHGR-RPMAVGTGS-ESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQC  162 (188)
T ss_pred             cCCCccH-HHHHHHHHhC-CCEEEEcCC-chHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHe
Confidence            4567885 5899999876 899999999 8999999999999999999765432     477899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEEC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      +||||+.+|+++|+++|+++|+|.
T Consensus       163 l~igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        163 VVFEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             EEEeccHhhHHHHHHCCCEEEeec
Confidence            999999999999999999999986

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.79  E-value=1.2e-19  Score=148.56  Aligned_cols=95  Identities=21%  Similarity=0.300  Sum_probs=85.2

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+++|++++|+||+   ..++..++++|+.+||+.+...     .+|+++.|..++++++++|+++
T Consensus        86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  162 (185)
T TIGR02009        86 GAEVLPGIENFLKRLKKKGIAVGLGSSS---KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNEC  162 (185)
T ss_pred             CCCCCcCHHHHHHHHHHcCCeEEEEeCc---hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence            4689999999999999999999999998   3578899999999999975432     2477788999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEE
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      +||||+..|+++|+++|+++|+|
T Consensus       163 v~IgD~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       163 VVFEDALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             EEEeCcHhhHHHHHHCCCeEeeC
Confidence            99999999999999999999975

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=99.79  E-value=2.1e-19  Score=143.45  Aligned_cols=123  Identities=50%  Similarity=0.787  Sum_probs=96.7

Q ss_pred             cccccCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc----------ccccccceecCCChhHHH
Q psy8911           2 KVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN----------QYFDHKQIFPGQKTTHFA   71 (280)
Q Consensus         2 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~----------~~fd~~~i~~~~~~~~~~   71 (280)
                      .++|+.+..+.+||++.++|+.|+++|++++++|.++.|+.++.+|+.+++.          ++|++..|+.+++..+|+
T Consensus        35 ~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~  114 (169)
T PF12689_consen   35 VVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFR  114 (169)
T ss_dssp             -EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS-HHHHHH
T ss_pred             EEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCchHHHHH
Confidence            4788999999999999999999999999999999888779999999999999          999999999999999999


Q ss_pred             HHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCchhhhhccccccc
Q psy8911          72 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFI  124 (280)
Q Consensus        72 ~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~  124 (280)
                      .+.++.|+++++++||||..+|++...+.|+.++++++|.+++.+.+++..|.
T Consensus       115 ~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~gL~~~~  167 (169)
T PF12689_consen  115 RIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFERGLEKFR  167 (169)
T ss_dssp             HHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHHHHHHHH
T ss_pred             HHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999988877653

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.78  E-value=1.3e-19  Score=152.59  Aligned_cols=96  Identities=11%  Similarity=0.152  Sum_probs=85.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc-ceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-KEIY-----PGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~-~~~~-----~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      .+.++||+.++|+.|   +++++|+||+ ....++..++++|+.++|+. +.+.     .+|+++.|..+++++|++|++
T Consensus        86 ~~~~~~gv~~~L~~L---~~~~~ivTn~-~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~  161 (221)
T PRK10563         86 ELEPIAGANALLESI---TVPMCVVSNG-PVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVEN  161 (221)
T ss_pred             cCCcCCCHHHHHHHc---CCCEEEEeCC-cHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHH
Confidence            468999999999999   3899999999 88899999999999999963 3332     247789999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      |+||||++.|+++|+++|++++++..
T Consensus       162 ~l~igDs~~di~aA~~aG~~~i~~~~  187 (221)
T PRK10563        162 CILVDDSSAGAQSGIAAGMEVFYFCA  187 (221)
T ss_pred             eEEEeCcHhhHHHHHHCCCEEEEECC
Confidence            99999999999999999999999963

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.78  E-value=4.5e-19  Score=149.65  Aligned_cols=102  Identities=20%  Similarity=0.280  Sum_probs=92.5

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++++|+..+|+.+...     .+|+++.|+.++++++++|++|
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  169 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNK-PTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM  169 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe
Confidence            4679999999999999999999999999 888889999999999999865332     2477889999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +||||+.+|+++|+++|+++++|.+|..
T Consensus       170 i~igD~~~Di~~a~~~g~~~i~v~~g~~  197 (226)
T PRK13222        170 LFVGDSRNDIQAARAAGCPSVGVTYGYN  197 (226)
T ss_pred             EEECCCHHHHHHHHHCCCcEEEECcCCC
Confidence            9999999999999999999999998764

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.77  E-value=1.1e-18  Score=150.14  Aligned_cols=102  Identities=12%  Similarity=0.044  Sum_probs=92.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc-ccceEe-----cCCCHHHHHHHHHHcCCC-CC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNKEIY-----PGPKTTHFESLKKATGIE-YK  235 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f-~~~~~~-----~~~k~~~~~~~~~~~~~~-~~  235 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....++.+++++|+.+|| +.+.+.     .+|+|+.|..+++++|+. |+
T Consensus        97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~-~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~  175 (253)
T TIGR01422        97 YSSPIPGVIEVIAYLRARGIKIGSTTGY-TREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVA  175 (253)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEECCC-cHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCch
Confidence            4689999999999999999999999999 899999999999999996 754332     247889999999999995 99


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|+||||+++|+++|+++||.+|+|.+|..
T Consensus       176 ~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~  205 (253)
T TIGR01422       176 ACVKVGDTVPDIEEGRNAGMWTVGLILSSN  205 (253)
T ss_pred             heEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence            999999999999999999999999998864

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.77  E-value=7.4e-19  Score=163.42  Aligned_cols=100  Identities=20%  Similarity=0.257  Sum_probs=90.3

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec----CCCHHHHHHHHHHcCCCCCcEE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP----GPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~----~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      ..++|||+.++|+.|+++|++++|+||+ ....++..++++|+.+||+.+.+.+    .|||+.|..+++++  +|++|+
T Consensus       328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~-~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v  404 (459)
T PRK06698        328 KGALYPNVKEIFTYIKENNCSIYIASNG-LTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKY--DIKEAA  404 (459)
T ss_pred             CCCcCCCHHHHHHHHHHCCCeEEEEeCC-chHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhc--CcceEE
Confidence            4689999999999999999999999999 9999999999999999999865433    37889999999886  579999


Q ss_pred             EEeCCcCCcccccccCceEEEECCCCC
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|||+++|+++|+++||.+|++.++..
T Consensus       405 ~VGDs~~Di~aAk~AG~~~I~v~~~~~  431 (459)
T PRK06698        405 VVGDRLSDINAAKDNGLIAIGCNFDFA  431 (459)
T ss_pred             EEeCCHHHHHHHHHCCCeEEEEeCCCC
Confidence            999999999999999999999988753

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.76  E-value=2.5e-18  Score=143.17  Aligned_cols=107  Identities=19%  Similarity=0.235  Sum_probs=95.5

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.+...     .+|+++.|..+++++|++|++
T Consensus        72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~  150 (205)
T TIGR01454        72 GEVEVFPGVPELLAELRADGVGTAIATGK-SGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED  150 (205)
T ss_pred             cccccCCCHHHHHHHHHHCCCeEEEEeCC-chHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence            35789999999999999999999999999 888899999999999999975432     247789999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCC-CHHHH
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGM-SHAVL  269 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~-~~~~~  269 (280)
                      |+||||+..|+.+|+++||+++.+.+|. +..++
T Consensus       151 ~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l  184 (205)
T TIGR01454       151 AVMVGDAVTDLASARAAGTATVAALWGEGDAGEL  184 (205)
T ss_pred             eEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhh
Confidence            9999999999999999999999999887 34343

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.76  E-value=4.2e-18  Score=137.67  Aligned_cols=114  Identities=14%  Similarity=0.074  Sum_probs=98.3

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc-HHHHHHHHhhCC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE-ILHAKQILNLIN  204 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~-~~~~~~~l~~~g  204 (280)
                      .+++++|+||||++.                     ....++||+.++|+.|+++|++++|+||+ . ...+...++.++
T Consensus        25 v~~vv~D~Dgtl~~~---------------------~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~-~~~~~~~~~~~~~g   82 (170)
T TIGR01668        25 IKGVVLDKDNTLVYP---------------------DHNEAYPALRDWIEELKAAGRKLLIVSNN-AGEQRAKAVEKALG   82 (170)
T ss_pred             CCEEEEecCCccccC---------------------CCCCcChhHHHHHHHHHHcCCEEEEEeCC-chHHHHHHHHHHcC
Confidence            368899999999752                     23468999999999999999999999999 6 567777778888


Q ss_pred             CccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc-CCcccccccCceEEEECCCCC
Q psy8911         205 LNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       205 l~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~-~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +..++.    ..+|+++.|..++++++++|++|+||||+. .|+.+|+++||.+|+|.+|..
T Consensus        83 l~~~~~----~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~  140 (170)
T TIGR01668        83 IPVLPH----AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH  140 (170)
T ss_pred             CEEEcC----CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence            865542    236888999999999999999999999998 699999999999999998763

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PLN02645 phosphoglycolate phosphatase

Probab=99.76  E-value=4.7e-18  Score=150.29  Aligned_cols=223  Identities=14%  Similarity=0.121  Sum_probs=147.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHH---HHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQ---LLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~---~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~   88 (280)
                      .++||+.++|+.|+++|++++++||++. ...+.   .++.+|+.-.++  .|+++...  ....++..+......+|+.
T Consensus        44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~-~~~~~~~~~l~~lGi~~~~~--~I~ts~~~--~~~~l~~~~~~~~~~V~vi  118 (311)
T PLN02645         44 KLIEGVPETLDMLRSMGKKLVFVTNNST-KSRAQYGKKFESLGLNVTEE--EIFSSSFA--AAAYLKSINFPKDKKVYVI  118 (311)
T ss_pred             ccCcCHHHHHHHHHHCCCEEEEEeCCCC-CCHHHHHHHHHHCCCCCChh--hEeehHHH--HHHHHHhhccCCCCEEEEE
Confidence            5799999999999999999999999884 33333   347788877777  77776543  3344445555555678888


Q ss_pred             CCcccccccccCCCeEEEEcCCCchhhhhccc----cccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCcee
Q psy8911          89 DEERNSHDVSPLGVTCILVEDGMTNAITLYGR----SVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLI  164 (280)
Q Consensus        89 D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~----~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~  164 (280)
                      ++....+.++++|+.++......... .....    ....-...++...|..+                           
T Consensus       119 G~~~~~~~l~~~Gi~~~~g~~~~~~~-~~~~~~~~~~~~~~i~aVvvg~d~~~---------------------------  170 (311)
T PLN02645        119 GEEGILEELELAGFQYLGGPEDGDKK-IELKPGFLMEHDKDVGAVVVGFDRYI---------------------------  170 (311)
T ss_pred             cCHHHHHHHHHCCCEEecCccccccc-cccccccccccCCCCCEEEEecCCCC---------------------------
Confidence            88888999999999876521111000 00000    00000122222222222                           


Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH-HHHHHhhCCCccccccce--------EecCCCHHHHHHHHHHcCCCCC
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILH-AKQILNLINLNQYFSNKE--------IYPGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~-~~~~l~~~gl~~~f~~~~--------~~~~~k~~~~~~~~~~~~~~~~  235 (280)
                       -|.........|+.++-.++|+||+ .... ....+...|+..+|+.+.        ...+|++..|..++++++++++
T Consensus       171 -~~~~l~~a~~~l~~~~g~~~i~tn~-d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~  248 (311)
T PLN02645        171 -NYYKIQYATLCIRENPGCLFIATNR-DAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKS  248 (311)
T ss_pred             -CHHHHHHHHHHHhcCCCCEEEEeCC-CCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcc
Confidence             1222333444555432358999999 4432 233456677777887531        1235778889999999999999


Q ss_pred             cEEEEeCCc-CCcccccccCceEEEECCCCC-HHHH
Q psy8911         236 DMVFFDDEE-RNSHDVSPLGVTCIHVKKGMS-HAVL  269 (280)
Q Consensus       236 ~~l~igD~~-~di~~a~~aG~~~i~v~~g~~-~~~~  269 (280)
                      +++||||+. +||.+|+++|+++++|.+|.. .+.+
T Consensus       249 ~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~  284 (311)
T PLN02645        249 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESML  284 (311)
T ss_pred             cEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHH
Confidence            999999997 899999999999999998874 3433

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.76  E-value=2.4e-18  Score=138.37  Aligned_cols=120  Identities=16%  Similarity=0.171  Sum_probs=92.9

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceec-cCCCHHHHHHHHhhCCcEEEEEcCCCcHH----------
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSEIL----------  194 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~L~~L~~~g~~~~i~T~~~~~~----------  194 (280)
                      .+.+.||+||||+......           .+-.....++ +|||+.++|+.|+++|++++|+||+ ...          
T Consensus        13 ~k~~~~D~Dgtl~~~~~~~-----------~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~-~~~~~~~~~~~~~   80 (166)
T TIGR01664        13 SKVAAFDLDGTLITTRSGK-----------VFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQ-SGIGRGKLSAESF   80 (166)
T ss_pred             CcEEEEeCCCceEecCCCC-----------cccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCC-cccccCcccHHHH
Confidence            5789999999998632111           0111223344 7999999999999999999999998 542          


Q ss_pred             --HHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcC--CCCCcEEEEeCCc--------CCcccccccCceE
Q psy8911         195 --HAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATG--IEYKDMVFFDDEE--------RNSHDVSPLGVTC  257 (280)
Q Consensus       195 --~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~--~~~~~~l~igD~~--------~di~~a~~aG~~~  257 (280)
                        .++..++++|+..  +.+...     .+|+++.+..++++++  ++|++++||||+.        .|+++|+++|+++
T Consensus        81 ~~~i~~~l~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~  158 (166)
T TIGR01664        81 KNKIEAFLEKLKVPI--QVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF  158 (166)
T ss_pred             HHHHHHHHHHcCCCE--EEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence              4678899999954  222221     2477789999999999  9999999999997        5999999999998


Q ss_pred             EE
Q psy8911         258 IH  259 (280)
Q Consensus       258 i~  259 (280)
                      ++
T Consensus       159 ~~  160 (166)
T TIGR01664       159 KY  160 (166)
T ss_pred             CC
Confidence            64

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.75  E-value=1.6e-18  Score=146.40  Aligned_cols=100  Identities=15%  Similarity=0.218  Sum_probs=88.8

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p   81 (280)
                      ..+.++||+.++|+.|+++|++++|+||++. ..++..++.+++.+||+  .++++++       +..|+.+++++|++|
T Consensus        90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd--~iv~s~~~~~~KP~p~~~~~~~~~~~~~p  166 (224)
T PRK14988         90 PRAVLREDTVPFLEALKASGKRRILLTNAHP-HNLAVKLEHTGLDAHLD--LLLSTHTFGYPKEDQRLWQAVAEHTGLKA  166 (224)
T ss_pred             ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCH-HHHHHHHHHCCcHHHCC--EEEEeeeCCCCCCCHHHHHHHHHHcCCCh
Confidence            4578999999999999999999999999999 88999999999999999  6665432       234999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCe-EEEEcCCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVT-CILVEDGM  111 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~-~i~v~~~~  111 (280)
                      ++|+||||+..|+++|+++||+ +++|+++.
T Consensus       167 ~~~l~igDs~~di~aA~~aG~~~~~~v~~~~  197 (224)
T PRK14988        167 ERTLFIDDSEPILDAAAQFGIRYCLGVTNPD  197 (224)
T ss_pred             HHEEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence            9999999999999999999998 56777654

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.75  E-value=2.4e-18  Score=142.55  Aligned_cols=97  Identities=19%  Similarity=0.267  Sum_probs=88.9

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~   82 (280)
                      .++++||+.++|++|+++|++++|+||++. ..++..++.+|+.++||  .++++++       ...|+.+++++|++|+
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~-~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~  166 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNGSP-AMLKSLVKHAGLDDPFD--AVLSADAVRAYKPAPQVYQLALEALGVPPD  166 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHCCChhhhh--eeEehhhcCCCCCCHHHHHHHHHHhCCChh
Confidence            578999999999999999999999999999 89999999999999999  6776543       2349999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      +|+||||+..|+++|+++||++|++..
T Consensus       167 ~~~~vgD~~~Di~~A~~~G~~~i~v~r  193 (198)
T TIGR01428       167 EVLFVASNPWDLGGAKKFGFKTAWVNR  193 (198)
T ss_pred             hEEEEeCCHHHHHHHHHCCCcEEEecC
Confidence            999999999999999999999999965

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.75  E-value=2.8e-18  Score=147.60  Aligned_cols=101  Identities=10%  Similarity=0.024  Sum_probs=90.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-cccceecCCC-------hhHHHHHHHHhCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-DHKQIFPGQK-------TTHFANLKKATGIE   80 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d~~~i~~~~~-------~~~~~~~~~~~g~~   80 (280)
                      ..++++||+.++|+.|+++|++++|+||++. ..++.+++.+++.++| |  .++++++       +..|..+++++|+.
T Consensus        96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~-~~~~~~l~~~gl~~~f~d--~ii~~~~~~~~KP~p~~~~~a~~~l~~~  172 (253)
T TIGR01422        96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTR-EMMDVVAPEAALQGYRPD--YNVTTDDVPAGRPAPWMALKNAIELGVY  172 (253)
T ss_pred             hcCccCCCHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHHHHhcCCCCc--eEEccccCCCCCCCHHHHHHHHHHcCCC
Confidence            4578999999999999999999999999999 8999999999999996 7  6666543       33499999999995


Q ss_pred             -CccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          81 -YKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        81 -p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                       |++|+||||++.|+++|+++|+.+|+|.++..
T Consensus       173 ~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~  205 (253)
T TIGR01422       173 DVAACVKVGDTVPDIEEGRNAGMWTVGLILSSN  205 (253)
T ss_pred             CchheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence             99999999999999999999999999987653

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.75  E-value=4e-18  Score=141.18  Aligned_cols=99  Identities=18%  Similarity=0.200  Sum_probs=91.0

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.+.+.+     +|+++.|..+++++|++|++|
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~-~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~  168 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNG-SPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEV  168 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhE
Confidence            4678999999999999999999999999 8888999999999999999764432     477899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +||||+..|+++|+++||++|+|..
T Consensus       169 ~~vgD~~~Di~~A~~~G~~~i~v~r  193 (198)
T TIGR01428       169 LFVASNPWDLGGAKKFGFKTAWVNR  193 (198)
T ss_pred             EEEeCCHHHHHHHHHCCCcEEEecC
Confidence            9999999999999999999999974

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.74  E-value=1.8e-18  Score=148.93  Aligned_cols=99  Identities=12%  Similarity=0.243  Sum_probs=90.0

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p   81 (280)
                      ..+++|||+.++|+.|+++|++++|+||++. ..++..++.+++.+||+  .+++++++       ..|+.+++++|++|
T Consensus       106 ~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~-~~~~~~l~~~gl~~~Fd--~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p  182 (260)
T PLN03243        106 GLYRLRPGSREFVQALKKHEIPIAVASTRPR-RYLERAIEAVGMEGFFS--VVLAAEDVYRGKPDPEMFMYAAERLGFIP  182 (260)
T ss_pred             cCcccCCCHHHHHHHHHHCCCEEEEEeCcCH-HHHHHHHHHcCCHhhCc--EEEecccCCCCCCCHHHHHHHHHHhCCCh
Confidence            3578999999999999999999999999999 89999999999999999  77765432       34999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++|+||||+..|+++|+++||.+|++.+.
T Consensus       183 ~~~l~IgDs~~Di~aA~~aG~~~i~v~g~  211 (260)
T PLN03243        183 ERCIVFGNSNSSVEAAHDGCMKCVAVAGK  211 (260)
T ss_pred             HHeEEEcCCHHHHHHHHHcCCEEEEEecC
Confidence            99999999999999999999999999743

>PHA02597 30

Probab=99.74  E-value=1.5e-18  Score=143.64  Aligned_cols=100  Identities=21%  Similarity=0.243  Sum_probs=82.9

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc----ccceEec--CCCHHHHHHHHHHcCCCCC
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF----SNKEIYP--GPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f----~~~~~~~--~~k~~~~~~~~~~~~~~~~  235 (280)
                      ..+.+|||+.++|+.|+++ ++++++||+ ........++++++..+|    +.+....  .|||+.|..+++++|  |+
T Consensus        71 ~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~-~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~  146 (197)
T PHA02597         71 RYLSAYDDALDVINKLKED-YDFVAVTAL-GDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DR  146 (197)
T ss_pred             HhccCCCCHHHHHHHHHhc-CCEEEEeCC-ccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CC
Confidence            3467999999999999987 568888998 666666677888887655    3332222  478899999999999  89


Q ss_pred             cEEEEeCCcCCccccccc--CceEEEECCCCC
Q psy8911         236 DMVFFDDEERNSHDVSPL--GVTCIHVKKGMS  265 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~a--G~~~i~v~~g~~  265 (280)
                      +++||||+..|+++|++|  ||++|++++|..
T Consensus       147 ~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~  178 (197)
T PHA02597        147 VVCFVDDLAHNLDAAHEALSQLPVIHMLRGER  178 (197)
T ss_pred             cEEEeCCCHHHHHHHHHHHcCCcEEEecchhh
Confidence            999999999999999999  999999998853

2 hypothetical protein; Provisional

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.74  E-value=3.7e-18  Score=171.63  Aligned_cols=105  Identities=21%  Similarity=0.285  Sum_probs=95.1

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc-cccccceEec-----CCCHHHHHHHHHHcCCCCCcEE
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKEIYP-----GPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~-~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      .++||+.++|+.|+++|++++|+||+ ....++..++++|+. .||+.+.+..     +|+|++|..++++++++|++|+
T Consensus       161 ~~~pG~~elL~~Lk~~G~~l~IvSn~-~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v  239 (1057)
T PLN02919        161 IGFPGALELITQCKNKGLKVAVASSA-DRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV  239 (1057)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEeCC-cHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence            47999999999999999999999999 899999999999996 7899764432     4778999999999999999999


Q ss_pred             EEeCCcCCcccccccCceEEEECCCCCHHHHH
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQ  270 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~  270 (280)
                      ||||+..|+++|+++||++|+|.++...+++.
T Consensus       240 ~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~  271 (1057)
T PLN02919        240 VIEDALAGVQAARAAGMRCIAVTTTLSEEILK  271 (1057)
T ss_pred             EEcCCHHHHHHHHHcCCEEEEECCCCCHHHHh
Confidence            99999999999999999999999987766654

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.74  E-value=4.7e-18  Score=143.33  Aligned_cols=102  Identities=17%  Similarity=0.224  Sum_probs=92.0

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIE   80 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~   80 (280)
                      ...+.++||+.++|+.|+++|++++|+||+.. ...+..++.+++.++|+  .+++++       +...|+.+++++|++
T Consensus        88 ~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~  164 (222)
T PRK10826         88 EETRPLLPGVREALALCKAQGLKIGLASASPL-HMLEAVLTMFDLRDYFD--ALASAEKLPYSKPHPEVYLNCAAKLGVD  164 (222)
T ss_pred             hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcH-HHHHHHHHhCcchhccc--EEEEcccCCCCCCCHHHHHHHHHHcCCC
Confidence            34578999999999999999999999999999 88999999999999999  666543       234599999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      |++|+||||+..|+++|+++|+++|+++++..
T Consensus       165 ~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~  196 (222)
T PRK10826        165 PLTCVALEDSFNGMIAAKAARMRSIVVPAPEQ  196 (222)
T ss_pred             HHHeEEEcCChhhHHHHHHcCCEEEEecCCcc
Confidence            99999999999999999999999999987653

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.74  E-value=5.6e-18  Score=142.04  Aligned_cols=102  Identities=14%  Similarity=0.155  Sum_probs=91.9

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIE   80 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~   80 (280)
                      ...+.++||+.++|+.|+++|++++|+||++. ..++..++.+|+.+||+  .+++++       ++..|+.+++++|++
T Consensus        78 ~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~-~~~~~~l~~~gl~~~f~--~i~~~~~~~~~Kp~p~~~~~~~~~~~~~  154 (214)
T PRK13288         78 DELVTEYETVYETLKTLKKQGYKLGIVTTKMR-DTVEMGLKLTGLDEFFD--VVITLDDVEHAKPDPEPVLKALELLGAK  154 (214)
T ss_pred             hhhcccCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCChhcee--EEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence            34578999999999999999999999999999 89999999999999999  666643       234599999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      |++|+||||+.+|+++|+++|+.++++.++..
T Consensus       155 ~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~  186 (214)
T PRK13288        155 PEEALMVGDNHHDILAGKNAGTKTAGVAWTIK  186 (214)
T ss_pred             HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCC
Confidence            99999999999999999999999999987643

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.74  E-value=3e-18  Score=144.14  Aligned_cols=97  Identities=21%  Similarity=0.213  Sum_probs=84.7

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce-----------Ee----cCCCHHHHHHH
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE-----------IY----PGPKTTHFESL  226 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~-----------~~----~~~k~~~~~~~  226 (280)
                      ..++++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|....           .+    ..||+..|..+
T Consensus        82 ~~~~~~~g~~~~l~~l~~~g~~~~IvS~~-~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  160 (219)
T TIGR00338        82 ENLPLTEGAEELVKTLKEKGYKVAVISGG-FDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL  160 (219)
T ss_pred             hcCCcCCCHHHHHHHHHHCCCEEEEECCC-cHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence            45679999999999999999999999999 8899999999999999885310           11    12588999999


Q ss_pred             HHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         227 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       227 ~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      +++++++|++|+||||+.+|+++|+++|+.++.
T Consensus       161 ~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~  193 (219)
T TIGR00338       161 LRKEGISPENTVAVGDGANDLSMIKAAGLGIAF  193 (219)
T ss_pred             HHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe
Confidence            999999999999999999999999999998643

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.73  E-value=8.5e-18  Score=139.99  Aligned_cols=101  Identities=18%  Similarity=0.264  Sum_probs=91.4

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ..++++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|+  .+++++       +...|+.+++++|++|
T Consensus        72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~-~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~~~~~~~~~~~~~~~~  148 (205)
T TIGR01454        72 GEVEVFPGVPELLAELRADGVGTAIATGKSG-PRARSLLEALGLLPLFD--HVIGSDEVPRPKPAPDIVREALRLLDVPP  148 (205)
T ss_pred             cccccCCCHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHcCChhhee--eEEecCcCCCCCCChHHHHHHHHHcCCCh
Confidence            4689999999999999999999999999999 88999999999999999  666543       2344999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|+||||+..|+++|+++|+++|++.++..
T Consensus       149 ~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~  179 (205)
T TIGR01454       149 EDAVMVGDAVTDLASARAAGTATVAALWGEG  179 (205)
T ss_pred             hheEEEcCCHHHHHHHHHcCCeEEEEEecCC
Confidence            9999999999999999999999999987753

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.73  E-value=5.9e-18  Score=143.02  Aligned_cols=99  Identities=21%  Similarity=0.333  Sum_probs=89.9

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .++++|++.++|+.|+++ ++++|+||+ ....+...++.+||.++||.+.+++     +|.+.+|..+++++|++|+++
T Consensus        97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg-~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~  174 (229)
T COG1011          97 LLPDYPEALEALKELGKK-YKLGILTNG-ARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA  174 (229)
T ss_pred             hCccChhHHHHHHHHHhh-ccEEEEeCC-ChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence            378999999999999999 999999999 8889999999999999999875543     477799999999999999999


Q ss_pred             EEEeCCcCCc-ccccccCceEEEECCC
Q psy8911         238 VFFDDEERNS-HDVSPLGVTCIHVKKG  263 (280)
Q Consensus       238 l~igD~~~di-~~a~~aG~~~i~v~~g  263 (280)
                      +||||+..+. .+|+++||++|++..+
T Consensus       175 l~VgD~~~~di~gA~~~G~~~vwi~~~  201 (229)
T COG1011         175 LFVGDSLENDILGARALGMKTVWINRG  201 (229)
T ss_pred             EEECCChhhhhHHHHhcCcEEEEECCC
Confidence            9999999966 9999999999999754

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.73  E-value=7.8e-18  Score=141.70  Aligned_cols=101  Identities=17%  Similarity=0.328  Sum_probs=90.3

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p   81 (280)
                      ..++++||+.++|+.|+++|++++|+||++. ..++..++.+++..||+  .++++++       +..|+.+++++|++|
T Consensus        91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~~~~~~~~~~~~~~~~  167 (221)
T TIGR02253        91 AYLRVYPGVRDTLMELRESGYRLGIITDGLP-VKQWEKLERLGVRDFFD--AVITSEEEGVEKPHPKIFYAALKRLGVKP  167 (221)
T ss_pred             HhCCCCCCHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhCChHHhcc--EEEEeccCCCCCCCHHHHHHHHHHcCCCh
Confidence            3468999999999999999999999999998 88899999999999999  6665533       234999999999999


Q ss_pred             ccEEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911          82 KDMVFFDDEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        82 ~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|+||||+. .|+.+|+++|+++|++.++..
T Consensus       168 ~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~  199 (221)
T TIGR02253       168 EEAVMVGDRLDKDIKGAKNLGMKTVWINQGKS  199 (221)
T ss_pred             hhEEEECCChHHHHHHHHHCCCEEEEECCCCC
Confidence            9999999998 899999999999999977643

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.73  E-value=6.4e-18  Score=142.32  Aligned_cols=103  Identities=20%  Similarity=0.295  Sum_probs=92.7

Q ss_pred             cCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhC
Q psy8911           6 ARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATG   78 (280)
Q Consensus         6 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g   78 (280)
                      .....++++||+.++|..|+++|++++++||+++ ..++..++.+|+.+||+  .++.+       +.++.|+.+++++|
T Consensus        80 ~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~-~~~~~~L~~~gl~~~f~--~~v~~~dv~~~KP~Pd~yL~Aa~~Lg  156 (221)
T COG0637          80 LELEGLKPIPGVVELLEQLKARGIPLAVASSSPR-RAAERVLARLGLLDYFD--VIVTADDVARGKPAPDIYLLAAERLG  156 (221)
T ss_pred             hhhcCCCCCccHHHHHHHHHhcCCcEEEecCChH-HHHHHHHHHccChhhcc--hhccHHHHhcCCCCCHHHHHHHHHcC
Confidence            3456689999999999999999999999999999 89999999999999999  65554       33445999999999


Q ss_pred             CCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ++|++||+||||+.+|+||++|||.+|.++.+.
T Consensus       157 v~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~  189 (221)
T COG0637         157 VDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGH  189 (221)
T ss_pred             CChHHeEEEecchhHHHHHHHCCCEEEEecCCC
Confidence            999999999999999999999999999998743

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.73  E-value=9.7e-18  Score=140.26  Aligned_cols=101  Identities=18%  Similarity=0.330  Sum_probs=91.3

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p   81 (280)
                      ..++++||+.++|+.|+++|++++|+||++. ..++..++++++.++|+  .++++++       +..|+.+++++|++|
T Consensus        82 ~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~  158 (213)
T TIGR01449        82 ELTSVFPGVEATLGALRAKGLRLGLVTNKPT-PLARPLLELLGLAKYFS--VLIGGDSLAQRKPHPDPLLLAAERLGVAP  158 (213)
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCcHhhCc--EEEecCCCCCCCCChHHHHHHHHHcCCCh
Confidence            4578999999999999999999999999999 89999999999999999  6666532       234999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|+||||+..|+++|+++|+.++++.++..
T Consensus       159 ~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~  189 (213)
T TIGR01449       159 QQMVYVGDSRVDIQAARAAGCPSVLLTYGYR  189 (213)
T ss_pred             hHeEEeCCCHHHHHHHHHCCCeEEEEccCCC
Confidence            9999999999999999999999999977643

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.72  E-value=2e-17  Score=143.37  Aligned_cols=102  Identities=13%  Similarity=0.030  Sum_probs=90.9

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc-ccceEec-----CCCHHHHHHHHHHcCCC-CC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNKEIYP-----GPKTTHFESLKKATGIE-YK  235 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f-~~~~~~~-----~~k~~~~~~~~~~~~~~-~~  235 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....+...++.+++.++| +.+.+..     +|+|+.|..+++++|+. |+
T Consensus        99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~-~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~  177 (267)
T PRK13478         99 YATPIPGVLEVIAALRARGIKIGSTTGY-TREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVA  177 (267)
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCC-cHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence            4679999999999999999999999999 888889999999998885 6543322     47789999999999996 69


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|+||||+++|+++|+++|+.+|+|.+|..
T Consensus       178 e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~  207 (267)
T PRK13478        178 ACVKVDDTVPGIEEGLNAGMWTVGVILSGN  207 (267)
T ss_pred             ceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence            999999999999999999999999998864

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.72  E-value=1.2e-17  Score=149.30  Aligned_cols=102  Identities=9%  Similarity=0.147  Sum_probs=92.4

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p   81 (280)
                      ....++||+.++|+.|+++|++++|+||++. ..++..++.+|+.+||+  .+++++++       ..|+.+++++|++|
T Consensus       213 ~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~-~~~~~~L~~lgL~~yFd--~Iv~sddv~~~KP~Peifl~A~~~lgl~P  289 (381)
T PLN02575        213 GIYRLRTGSQEFVNVLMNYKIPMALVSTRPR-KTLENAIGSIGIRGFFS--VIVAAEDVYRGKPDPEMFIYAAQLLNFIP  289 (381)
T ss_pred             cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCHHHce--EEEecCcCCCCCCCHHHHHHHHHHcCCCc
Confidence            4578999999999999999999999999999 99999999999999999  77766443       34999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCCch
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      ++|+||||+..|+++|+++||++|++.++...
T Consensus       290 eecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~  321 (381)
T PLN02575        290 ERCIVFGNSNQTVEAAHDARMKCVAVASKHPI  321 (381)
T ss_pred             ccEEEEcCCHHHHHHHHHcCCEEEEECCCCCh
Confidence            99999999999999999999999999865433

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.72  E-value=7.3e-17  Score=143.43  Aligned_cols=136  Identities=16%  Similarity=0.135  Sum_probs=108.4

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC--------------
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS--------------  191 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~--------------  191 (280)
                      .+.+.||-||||+.....           .+.......+.+|||+.++|++|+++|++++|+||++              
T Consensus         2 ~k~l~lDrDgtl~~~~~~-----------~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~   70 (354)
T PRK05446          2 QKILFIDRDGTLIEEPPT-----------DFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDP   70 (354)
T ss_pred             CcEEEEeCCCCccCCCCc-----------cccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhh
Confidence            468899999999864321           1222344568999999999999999999999999951              


Q ss_pred             cHHHHHHHHhhCCCccccccceEe----------cCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         192 EILHAKQILNLINLNQYFSNKEIY----------PGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       192 ~~~~~~~~l~~~gl~~~f~~~~~~----------~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      .......+++.+++.  |+.+.+.          .+|++..+..++++++++|++++||||+..|+++|+++||++|+|.
T Consensus        71 ~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~  148 (354)
T PRK05446         71 PHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYA  148 (354)
T ss_pred             HHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEE
Confidence            244566788888884  5543221          2477889999999999999999999999999999999999999995


Q ss_pred             -CCCCHHHHHHHHH
Q psy8911         262 -KGMSHAVLQKGLK  274 (280)
Q Consensus       262 -~g~~~~~~~~~~~  274 (280)
                       .+++|+...+.|.
T Consensus       149 ~~~~~~~~i~~~l~  162 (354)
T PRK05446        149 RETLNWDAIAEQLT  162 (354)
T ss_pred             CCCCCHHHHHHHHh
Confidence             6788988776654

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.72  E-value=1.7e-17  Score=137.57  Aligned_cols=107  Identities=22%  Similarity=0.260  Sum_probs=91.7

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh-CCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~-~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ..++||+.++|+.|+++|++++|+||+ ........+.. .++..+|+.+.++.     +|+|+.|+.+++++|++|++|
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~-~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~  161 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNT-NRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA  161 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCC-chhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence            358999999999999999999999999 76666655544 47889998764432     488899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCCCHHHHHH
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQK  271 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~  271 (280)
                      +||||++.|+++|+++||++++++++.++.+..+
T Consensus       162 l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~  195 (199)
T PRK09456        162 VFFDDNADNIEAANALGITSILVTDKQTIPDYFA  195 (199)
T ss_pred             EEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHH
Confidence            9999999999999999999999998877766443

>TIGR01686 FkbH FkbH-like domain

Probab=99.71  E-value=1.9e-17  Score=147.01  Aligned_cols=119  Identities=23%  Similarity=0.279  Sum_probs=101.2

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh---
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL---  202 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~---  202 (280)
                      .|++++|+|+|||.....+..         .  ..-....+|+|+.++|+.|+++|++++|+||+ ....+...+++   
T Consensus         3 ~k~~v~DlDnTlw~gv~~e~g---------~--~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n-~~~~a~~~l~~~~~   70 (320)
T TIGR01686         3 LKVLVLDLDNTLWGGVLGEDG---------I--DNLNLSPLHKTLQEKIKTLKKQGFLLALASKN-DEDDAKKVFERRKD   70 (320)
T ss_pred             eEEEEEcCCCCCCCCEEccCC---------c--cccccCccHHHHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHhCcc
Confidence            478999999999974433321         0  00011246899999999999999999999999 88999999999   


Q ss_pred             -CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         203 -INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       203 -~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                       +++.+||+.+.+..+||++++..+++++|++|++++||||++.|+.++++++-.
T Consensus        71 ~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~  125 (320)
T TIGR01686        71 FILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV  125 (320)
T ss_pred             ccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence             999999998877788999999999999999999999999999999999996654

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.71  E-value=9.8e-18  Score=139.05  Aligned_cols=104  Identities=26%  Similarity=0.338  Sum_probs=88.9

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh-cCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL-FNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK   82 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~-~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~   82 (280)
                      ..++||+.++|+.|+++|++++|+||++. ...+..+.. .++..+||  .++++++       +..|+.+++++|++|+
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~-~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~  159 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEVRAAAD--HIYLSQDLGMRKPEARIYQHVLQAEGFSAA  159 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCch-hhHHHHHhhchhHHHhcC--EEEEecccCCCCCCHHHHHHHHHHcCCChh
Confidence            46899999999999999999999999999 666666555 47889999  6666533       3349999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCCchhhhh
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITL  117 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~  117 (280)
                      +|+||||+..|+++|+++||++++++++.+....+
T Consensus       160 ~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l  194 (199)
T PRK09456        160 DAVFFDDNADNIEAANALGITSILVTDKQTIPDYF  194 (199)
T ss_pred             HeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHH
Confidence            99999999999999999999999998876665443

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.71  E-value=1.6e-17  Score=140.86  Aligned_cols=101  Identities=20%  Similarity=0.364  Sum_probs=90.5

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIE   80 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~   80 (280)
                      ...++++||+.++|++|+++|++++|+||++. ..++..++.+++.++|+  .+++++       ++..|..+++++|++
T Consensus        91 ~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~-~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~p~~~~~~~~~l~~~  167 (229)
T PRK13226         91 GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPE-YLARLILPQLGWEQRCA--VLIGGDTLAERKPHPLPLLVAAERIGVA  167 (229)
T ss_pred             hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCchhccc--EEEecCcCCCCCCCHHHHHHHHHHhCCC
Confidence            34578999999999999999999999999999 88889999999999999  665543       233499999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|+||||+.+|+++|+++|+++|++.++.
T Consensus       168 p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~  198 (229)
T PRK13226        168 PTDCVYVGDDERDILAARAAGMPSVAALWGY  198 (229)
T ss_pred             hhhEEEeCCCHHHHHHHHHCCCcEEEEeecC
Confidence            9999999999999999999999999997765

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.71  E-value=1.6e-17  Score=133.83  Aligned_cols=96  Identities=21%  Similarity=0.423  Sum_probs=88.0

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p   81 (280)
                      ...+++||+.++|+.|+++|++++++||++. ..++..++.+++.++|+  .++++++       ...|+.+++++|++|
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~-~~~~~~l~~~~~~~~f~--~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p  150 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSR-ERIERVLERLGLDDYFD--EIISSDDVGSRKPDPDAYRRALEKLGIPP  150 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSEH-HHHHHHHHHTTHGGGCS--EEEEGGGSSSSTTSHHHHHHHHHHHTSSG
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCCc-ccccccccccccccccc--cccccchhhhhhhHHHHHHHHHHHcCCCc
Confidence            5689999999999999999999999999999 89999999999999999  6665432       244999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEE
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v  107 (280)
                      ++|+||||+..|+++|+++||.+|+|
T Consensus       151 ~~~~~vgD~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  151 EEILFVGDSPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             GGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred             ceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence            99999999999999999999999986

...

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.71  E-value=1.9e-17  Score=139.87  Aligned_cols=133  Identities=9%  Similarity=-0.019  Sum_probs=96.8

Q ss_pred             eeEEEecCCCCCCccccc-cc-Cccccc-----C-----CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC---
Q psy8911         127 NHLSKKLDYTLWPLHVHD-LV-APFKKI-----G-----QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS---  191 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~-~~-~~~~~~-----~-----~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~---  191 (280)
                      -.++||+||||+|+.... +. +.+...     .     ..+.........+++++.++|++|+++|++++++||+.   
T Consensus        64 ~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k  143 (237)
T TIGR01672        64 IAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGK  143 (237)
T ss_pred             eEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCc
Confidence            389999999999976531 11 222211     0     11111223455778889999999999999999999972   


Q ss_pred             cHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         192 EILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       192 ~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      ....++.+++++|+.++|+.+.....   +|++.. .+++++++    ++||||+.+|+.+|+++|+.++.|.+|+
T Consensus       144 ~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~  214 (237)
T TIGR01672       144 TDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRAS  214 (237)
T ss_pred             CHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecC
Confidence            23477888999999999986533222   445444 46677776    7999999999999999999999998765

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PRK11587 putative phosphatase; Provisional

Probab=99.71  E-value=2.7e-17  Score=138.38  Aligned_cols=100  Identities=13%  Similarity=0.062  Sum_probs=87.1

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIE   80 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~   80 (280)
                      ...+++|||+.++|+.|+++|++++|+||++. ...+..++..++ .+|+  .+++++       ++..|..+++++|++
T Consensus        79 ~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~-~~~~~~l~~~~l-~~~~--~i~~~~~~~~~KP~p~~~~~~~~~~g~~  154 (218)
T PRK11587         79 TEGITALPGAIALLNHLNKLGIPWAIVTSGSV-PVASARHKAAGL-PAPE--VFVTAERVKRGKPEPDAYLLGAQLLGLA  154 (218)
T ss_pred             hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCc-hHHHHHHHhcCC-CCcc--EEEEHHHhcCCCCCcHHHHHHHHHcCCC
Confidence            45678999999999999999999999999998 777888888888 5677  555442       233499999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|+||||+..|+++|+++|+.+|++.++.
T Consensus       155 p~~~l~igDs~~di~aA~~aG~~~i~v~~~~  185 (218)
T PRK11587        155 PQECVVVEDAPAGVLSGLAAGCHVIAVNAPA  185 (218)
T ss_pred             cccEEEEecchhhhHHHHHCCCEEEEECCCC
Confidence            9999999999999999999999999997654

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.71  E-value=1.2e-17  Score=132.61  Aligned_cols=92  Identities=20%  Similarity=0.255  Sum_probs=81.1

Q ss_pred             CCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe----cCCCHHHHHHHHHHcCCCCC
Q psy8911         160 KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY----PGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       160 ~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~----~~~k~~~~~~~~~~~~~~~~  235 (280)
                      +......+||+.++|+.|+++|++++|+||+ .+..+...++++ +.++|+.+.+.    .+|+++.|..++++++++| 
T Consensus        59 ~~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~-~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-  135 (154)
T TIGR01549        59 YDAEEAYIRGAADLLKRLKEAGIKLGIISNG-SLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-  135 (154)
T ss_pred             cchhheeccCHHHHHHHHHHCcCeEEEEeCC-chHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-
Confidence            3345667899999999999999999999999 888889899998 88899865433    3577899999999999999 


Q ss_pred             cEEEEeCCcCCcccccccC
Q psy8911         236 DMVFFDDEERNSHDVSPLG  254 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG  254 (280)
                      +|+||||+..|+++|+++|
T Consensus       136 ~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       136 EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             CEEEEeCCHHHHHHHHHcc
Confidence            9999999999999999987

HAD subfamilies caused by an overly broad single model.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.71  E-value=3.2e-17  Score=138.11  Aligned_cols=99  Identities=20%  Similarity=0.324  Sum_probs=90.4

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCCcc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEYKD   83 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p~~   83 (280)
                      ..+|||+.++|..|+++|++++|+||++. ..++.+++.+|+.+||+  .++++       +++..+..+++++|++|++
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~-~~~~~~l~~~gl~~~F~--~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~  164 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPE-RELDILLKALGLADYFD--VIVGGDDVPPPKPDPEPLLLLLEKLGLDPEE  164 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHhCCccccc--eEEcCCCCCCCCcCHHHHHHHHHHhCCChhh
Confidence            58999999999999999999999999999 99999999999999999  66662       2233499999999999999


Q ss_pred             EEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++||||+..|+++|++||+.+++|.+|..
T Consensus       165 ~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~  193 (220)
T COG0546         165 ALMVGDSLNDILAAKAAGVPAVGVTWGYN  193 (220)
T ss_pred             eEEECCCHHHHHHHHHcCCCEEEEECCCC
Confidence            99999999999999999999999988763

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.71  E-value=3.2e-17  Score=132.00  Aligned_cols=98  Identities=20%  Similarity=0.350  Sum_probs=90.7

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ...+++||+.++|+.|+++|++++++||+ .+..+...++.+|+.++|+.+.++.     +|++..|..++++++++|++
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~-~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~  152 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNG-SRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE  152 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESS-EHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecC-CcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence            56789999999999999999999999999 8999999999999999999765543     36678999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEE
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      |+||||++.|+++|+++||.+|+|
T Consensus       153 ~~~vgD~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  153 ILFVGDSPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             EEEEESSHHHHHHHHHTTSEEEEE
T ss_pred             EEEEeCCHHHHHHHHHcCCeEEeC
Confidence            999999999999999999999986

...

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.70  E-value=2.5e-17  Score=142.79  Aligned_cols=102  Identities=12%  Similarity=0.048  Sum_probs=89.8

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-cccceecCCC-------hhHHHHHHHHhCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-DHKQIFPGQK-------TTHFANLKKATGI   79 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d~~~i~~~~~-------~~~~~~~~~~~g~   79 (280)
                      ...+.++||+.++|+.|+++|++++|+||++. ..++..++.+++.++| +  .++++++       +..|..+++++|+
T Consensus        97 ~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~-~~~~~~l~~~~l~~~~~d--~i~~~~~~~~~KP~p~~~~~a~~~l~~  173 (267)
T PRK13478         97 ADYATPIPGVLEVIAALRARGIKIGSTTGYTR-EMMDVVVPLAAAQGYRPD--HVVTTDDVPAGRPYPWMALKNAIELGV  173 (267)
T ss_pred             hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHHhhcCCCce--EEEcCCcCCCCCCChHHHHHHHHHcCC
Confidence            34578999999999999999999999999999 8899999999998885 7  6665533       3349999999999


Q ss_pred             C-CccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          80 E-YKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        80 ~-p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      . |++|+||||+++|+++|+++|+++|+|.++..
T Consensus       174 ~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~  207 (267)
T PRK13478        174 YDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN  207 (267)
T ss_pred             CCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence            6 69999999999999999999999999987654

>COG4996 Predicted phosphatase [General function prediction only]

Probab=99.70  E-value=2.6e-16  Score=116.81  Aligned_cols=141  Identities=21%  Similarity=0.307  Sum_probs=115.2

Q ss_pred             eEEEecCCCCCCccccccc-CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         128 HLSKKLDYTLWPLHVHDLV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       128 ~~~fd~DgTL~d~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      ++.||.||||||.+..... |||.... ..+.+..+.++++||.++++|+.++..|+.++.+|.+ .+..+-+.|+.+++
T Consensus         2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN-~~~kA~~aLral~~   80 (164)
T COG4996           2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWN-FEDKAIKALRALDL   80 (164)
T ss_pred             cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecC-chHHHHHHHHHhch
Confidence            5789999999999887777 9999877 7889999999999999999999999999999999999 99999999999999


Q ss_pred             ccccccceEecCCCH-HHHHHHHHH------cCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHH
Q psy8911         206 NQYFSNKEIYPGPKT-THFESLKKA------TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVL  269 (280)
Q Consensus       206 ~~~f~~~~~~~~~k~-~~~~~~~~~------~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~  269 (280)
                      ..||+..++.+.|.+ .++-+++.+      ..++|++++|++|..-.+......=..+-.+..+.+...+
T Consensus        81 ~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~  151 (164)
T COG4996          81 LQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCY  151 (164)
T ss_pred             hhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHH
Confidence            999999888777766 344444443      4689999999999998877777632223333344444443

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.70  E-value=2.7e-17  Score=134.45  Aligned_cols=95  Identities=20%  Similarity=0.287  Sum_probs=85.1

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcEE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      ..++||+.++|+.|+++|++++|+||+ ..  ....++++|+.++|+.+...     .+|+++.|..++++++++|++|+
T Consensus        86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~-~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v  162 (185)
T TIGR01990        86 ADVLPGIKNLLDDLKKNNIKIALASAS-KN--APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI  162 (185)
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCC-cc--HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            478999999999999999999999998 43  45689999999999975432     24888999999999999999999


Q ss_pred             EEeCCcCCcccccccCceEEEEC
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ||||+++|+++|+++||++|+|+
T Consensus       163 ~vgD~~~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       163 GIEDAQAGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             EEecCHHHHHHHHHcCCEEEecC
Confidence            99999999999999999999874

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.70  E-value=3.4e-17  Score=141.97  Aligned_cols=104  Identities=17%  Similarity=0.315  Sum_probs=93.0

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC----hhHHHHHHHHhCCCCc
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK----TTHFANLKKATGIEYK   82 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~----~~~~~~~~~~~g~~p~   82 (280)
                      ....++++||+.++|+.|+++|++++|+||+.. ..++..++.+|+.++|+  .++++++    ...|+.++++++++|+
T Consensus       137 ~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~-~~~~~~L~~~gl~~~F~--~vi~~~~~~~k~~~~~~~l~~~~~~p~  213 (273)
T PRK13225        137 CLPALQLFPGVADLLAQLRSRSLCLGILSSNSR-QNIEAFLQRQGLRSLFS--VVQAGTPILSKRRALSQLVAREGWQPA  213 (273)
T ss_pred             hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCChhheE--EEEecCCCCCCHHHHHHHHHHhCcChh
Confidence            345678999999999999999999999999999 89999999999999999  6665533    3449999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCCch
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      +|+||||+..|+++|+++|+.+|++.++...
T Consensus       214 ~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~  244 (273)
T PRK13225        214 AVMYVGDETRDVEAARQVGLIAVAVTWGFND  244 (273)
T ss_pred             HEEEECCCHHHHHHHHHCCCeEEEEecCCCC
Confidence            9999999999999999999999999887543

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.70  E-value=3.4e-17  Score=135.60  Aligned_cols=101  Identities=20%  Similarity=0.199  Sum_probs=86.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe---------------cCCCHHHHHHHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY---------------PGPKTTHFESLK  227 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~---------------~~~k~~~~~~~~  227 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....++..++++|+..+|......               +.+|.+.+..++
T Consensus        78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~-~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~  156 (201)
T TIGR01491        78 EISLRDYAEELVRWLKEKGLKTAIVSGG-IMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK  156 (201)
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence            4679999999999999999999999999 889999999999999888643221               113345788899


Q ss_pred             HHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         228 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       228 ~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      ++++++|++++||||+.+|+.+|+++|+.++..+.+.
T Consensus       157 ~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~  193 (201)
T TIGR01491       157 RELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH  193 (201)
T ss_pred             HHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence            9999999999999999999999999999887766543

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.70  E-value=2.6e-17  Score=130.88  Aligned_cols=120  Identities=10%  Similarity=0.092  Sum_probs=94.6

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      +++.||+||||++....-..          .......+.+.++.  +|++|+++|++++|+||+ ....+...++++|+.
T Consensus         2 ~~~~~D~Dgtl~~~~~~~~~----------~~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~-~~~~~~~~l~~~gi~   68 (154)
T TIGR01670         2 RLLILDVDGVLTDGKIYYTN----------NGEEIKAFNVRDGY--GIRCALKSGIEVAIITGR-KAKLVEDRCKTLGIT   68 (154)
T ss_pred             eEEEEeCceeEEcCeEEECC----------CCcEEEEEechhHH--HHHHHHHCCCEEEEEECC-CCHHHHHHHHHcCCC
Confidence            67899999999874321100          00000112223333  899999999999999999 888889999999999


Q ss_pred             cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         207 QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       207 ~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      ++|+.    .+||++.+..++++++++|++|+||||+.+|+.+++++|+. +.+.+..
T Consensus        69 ~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~  121 (154)
T TIGR01670        69 HLYQG----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAH  121 (154)
T ss_pred             EEEec----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcC
Confidence            99974    36889999999999999999999999999999999999997 7776553

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.70  E-value=5e-17  Score=136.78  Aligned_cols=101  Identities=15%  Similarity=0.207  Sum_probs=90.4

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc--ccccccceecCCC-------hhHHHHHHHHhCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN--QYFDHKQIFPGQK-------TTHFANLKKATGI   79 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~--~~fd~~~i~~~~~-------~~~~~~~~~~~g~   79 (280)
                      ...+++||+.++|++|+++|++++|+||++. ..++..++.+++.  .+|+  .++++++       +..|+.+++++|+
T Consensus        84 ~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~-~~~~~~l~~~~l~~~~~f~--~i~~~~~~~~~KP~p~~~~~a~~~~~~  160 (220)
T TIGR03351        84 GPPVALPGAEEAFRSLRSSGIKVALTTGFDR-DTAERLLEKLGWTVGDDVD--AVVCPSDVAAGRPAPDLILRAMELTGV  160 (220)
T ss_pred             cCCccCCCHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHHhhhhhhccCC--EEEcCCcCCCCCCCHHHHHHHHHHcCC
Confidence            3468999999999999999999999999999 8999999999998  9999  7776643       2349999999999


Q ss_pred             C-CccEEEEeCCcccccccccCCCeE-EEEcCCCc
Q psy8911          80 E-YKDMVFFDDEERNSHDVSPLGVTC-ILVEDGMT  112 (280)
Q Consensus        80 ~-p~~~l~v~D~~~~i~aa~~~G~~~-i~v~~~~~  112 (280)
                      . |++|+||||++.|+++|+++||.+ +++.++..
T Consensus       161 ~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~  195 (220)
T TIGR03351       161 QDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAH  195 (220)
T ss_pred             CChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCC
Confidence            7 799999999999999999999999 89977643

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.70  E-value=4.3e-17  Score=128.80  Aligned_cols=130  Identities=15%  Similarity=0.101  Sum_probs=96.7

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeE-----ccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVM-----DAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN  201 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~  201 (280)
                      ..+++|+||||+........ +.......+.     ......+.++||+.++|+.|+ ++++++|+||+ ....++.+++
T Consensus         3 ~~lvldld~tl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~-~~~~~~~il~   79 (148)
T smart00577        3 KTLVLDLDETLVHSTHRSFK-EWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAG-LRMYADPVLD   79 (148)
T ss_pred             cEEEEeCCCCeECCCCCcCC-CCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCC-cHHHHHHHHH
Confidence            46899999999876431111 0000000000     112345789999999999999 57999999999 9999999999


Q ss_pred             hCCCcc-ccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911         202 LINLNQ-YFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       202 ~~gl~~-~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      ++++.. +|+.+...+.   .||. |.+++++++.+|++|+||||++.|+++++++|+.+--.
T Consensus        80 ~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f  141 (148)
T smart00577       80 LLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPW  141 (148)
T ss_pred             HhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCc
Confidence            999965 4576544332   3444 99999999999999999999999999999999876443

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.70  E-value=1e-16  Score=138.05  Aligned_cols=193  Identities=16%  Similarity=0.173  Sum_probs=134.8

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCchHH---HHHHHhhcCccccccccceecCCChh-HHHHHHHHhCCCCccEEEEe
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEIQG---AQQLLDLFNWNQYFDHKQIFPGQKTT-HFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~---~~~~l~~~~l~~~fd~~~i~~~~~~~-~~~~~~~~~g~~p~~~l~v~   88 (280)
                      ++|++.+.|+.|+++|++++++||++. ..   ....++.+|+.--.+  .|+++.... .|..   +.+   ..++++|
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~-~~~~~~~~~l~~~g~~~~~~--~i~ts~~~~~~~l~---~~~---~~~~~~g   92 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTK-ESKQDLLERLQRLGFDISED--EVFTPAPAARQLLE---EKQ---LRPMLLV   92 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCC-CCHHHHHHHHHHcCCCCCHH--HeEcHHHHHHHHHH---hcC---CCeEEEE
Confidence            899999999999999999999999877 43   555677778753333  676665432 2332   222   1355545


Q ss_pred             CCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCC
Q psy8911          89 DEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYR  168 (280)
Q Consensus        89 D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (280)
                      ...  ...... |+.     .              .-++.++...|.                           .--.|+
T Consensus        93 ~~~--~~~~~~-~~~-----~--------------~~~~~Vv~g~~~---------------------------~~~~y~  123 (257)
T TIGR01458        93 DDR--VLPDFD-GID-----T--------------SDPNCVVMGLAP---------------------------EHFSYQ  123 (257)
T ss_pred             Ccc--HHHHhc-cCC-----C--------------CCCCEEEEeccc---------------------------CccCHH
Confidence            421  111110 110     0              001222332221                           011378


Q ss_pred             CHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce--------EecCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911         169 GVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE--------IYPGPKTTHFESLKKATGIEYKDMVFF  240 (280)
Q Consensus       169 g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~l~i  240 (280)
                      ++.+.++.|++.+++++|+||+ ........+..+|+..+|+.+.        ...+|++..|..++++++++|++++||
T Consensus       124 ~l~~a~~~L~~~~~~~~iatn~-~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~v  202 (257)
T TIGR01458       124 ILNQAFRLLLDGAKPLLIAIGK-GRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMI  202 (257)
T ss_pred             HHHHHHHHHHcCCCCEEEEeCC-CCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEE
Confidence            8999999999999999999999 6666666677788888887432        224688899999999999999999999


Q ss_pred             eCCc-CCcccccccCceEEEECCCC
Q psy8911         241 DDEE-RNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       241 gD~~-~di~~a~~aG~~~i~v~~g~  264 (280)
                      ||+. +|+.+|+++|+++++|.+|.
T Consensus       203 GD~~~~Di~~a~~~G~~~i~v~~G~  227 (257)
T TIGR01458       203 GDDCRDDVGGAQDCGMRGIQVRTGK  227 (257)
T ss_pred             CCCcHHHHHHHHHcCCeEEEECCCC
Confidence            9997 89999999999999999885

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.69  E-value=4.7e-17  Score=136.32  Aligned_cols=101  Identities=16%  Similarity=0.198  Sum_probs=87.4

Q ss_pred             CceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---CCccccccc---eEecCCCHHHHHHHHHHcCCCC
Q psy8911         161 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNK---EIYPGPKTTHFESLKKATGIEY  234 (280)
Q Consensus       161 ~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---gl~~~f~~~---~~~~~~k~~~~~~~~~~~~~~~  234 (280)
                      .....+|||+.++|+.|+++|++++|+||+ ....++..++++   ++.+||+..   .++.+|+++.|..+++++|++|
T Consensus        91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~-s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p  169 (220)
T TIGR01691        91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSG-SVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP  169 (220)
T ss_pred             CcccCcCcCHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh
Confidence            445689999999999999999999999999 888888888886   565555532   2345688899999999999999


Q ss_pred             CcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         235 KDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       235 ~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      ++|+||||+..|+++|+++||+++++..
T Consensus       170 ~e~lfVgDs~~Di~AA~~AG~~ti~v~r  197 (220)
T TIGR01691       170 REILFLSDIINELDAARKAGLHTGQLVR  197 (220)
T ss_pred             hHEEEEeCCHHHHHHHHHcCCEEEEEEC
Confidence            9999999999999999999999999964

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.69  E-value=3.7e-17  Score=133.68  Aligned_cols=94  Identities=21%  Similarity=0.332  Sum_probs=83.1

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~   82 (280)
                      ...++||+.++|+.|+++|++++|+||+..   .+..++.+++.++|+  .+++++       ++..|+.++++++++|+
T Consensus        85 ~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~---~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~  159 (185)
T TIGR01990        85 PADVLPGIKNLLDDLKKNNIKIALASASKN---APTVLEKLGLIDYFD--AIVDPAEIKKGKPDPEIFLAAAEGLGVSPS  159 (185)
T ss_pred             CcccCccHHHHHHHHHHCCCeEEEEeCCcc---HHHHHHhcCcHhhCc--EEEehhhcCCCCCChHHHHHHHHHcCCCHH
Confidence            357899999999999999999999999765   467899999999999  665543       33449999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEc
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~  108 (280)
                      +|+||||++.|+++|+++||++|+|+
T Consensus       160 ~~v~vgD~~~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       160 ECIGIEDAQAGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             HeEEEecCHHHHHHHHHcCCEEEecC
Confidence            99999999999999999999999873

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK09449 dUMP phosphatase; Provisional

Probab=99.69  E-value=8e-17  Score=135.90  Aligned_cols=98  Identities=15%  Similarity=0.161  Sum_probs=87.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCC-CCc
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIE-YKD  236 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~-~~~  236 (280)
                      .+.++||+.++|+.|+ +|++++|+||+ ....++..++++|+.+||+.+.+..     +|+++.|..+++++|+. +++
T Consensus        93 ~~~~~~g~~~~L~~L~-~~~~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~  170 (224)
T PRK09449         93 ICTPLPGAVELLNALR-GKVKMGIITNG-FTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSR  170 (224)
T ss_pred             cCccCccHHHHHHHHH-hCCeEEEEeCC-cHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCccc
Confidence            3679999999999999 67999999999 8888999999999999999865443     47789999999999985 589


Q ss_pred             EEEEeCCc-CCcccccccCceEEEECC
Q psy8911         237 MVFFDDEE-RNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       237 ~l~igD~~-~di~~a~~aG~~~i~v~~  262 (280)
                      |+||||+. .|+++|+++||+++++..
T Consensus       171 ~~~vgD~~~~Di~~A~~aG~~~i~~~~  197 (224)
T PRK09449        171 VLMVGDNLHSDILGGINAGIDTCWLNA  197 (224)
T ss_pred             EEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence            99999998 699999999999999974

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.69  E-value=1.1e-16  Score=128.69  Aligned_cols=119  Identities=9%  Similarity=0.070  Sum_probs=96.2

Q ss_pred             ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHH-HHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911         124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPE-ILRYLKENKCLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      ...++++||.||||.|...             +++..+.+++-|..... -++.|+++|++++|+||+ ....++..+++
T Consensus         5 ~~i~~~v~d~dGv~tdg~~-------------~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k-~~~~~~~~l~~   70 (169)
T TIGR02726         5 KNIKLVILDVDGVMTDGRI-------------VINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSK-KSGAVRHRAEE   70 (169)
T ss_pred             ccCeEEEEeCceeeECCeE-------------EEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECC-CcHHHHHHHHH
Confidence            3468999999999988421             22333443433332222 257899999999999999 89999999999


Q ss_pred             CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911         203 INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       203 ~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      +|+.+||+..    +||++.+..++++++++|++|++|||+.+|+.+++.+|+..+.-
T Consensus        71 lgi~~~f~~~----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~  124 (169)
T TIGR02726        71 LKIKRFHEGI----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG  124 (169)
T ss_pred             CCCcEEEecC----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc
Confidence            9999999853    68899999999999999999999999999999999999886543

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK06769 hypothetical protein; Validated

Probab=99.68  E-value=5.9e-17  Score=131.36  Aligned_cols=103  Identities=16%  Similarity=0.191  Sum_probs=83.7

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchH--------HHHHHHhhcCccccccccce------ecCCChhHHHHHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQ--------GAQQLLDLFNWNQYFDHKQI------FPGQKTTHFANLK   74 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~--------~~~~~l~~~~l~~~fd~~~i------~~~~~~~~~~~~~   74 (280)
                      ..+++|||+.++|++|+++|++++|+||++. .        .....++.+++.++|.....      ...++++.|+.++
T Consensus        25 ~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~  103 (173)
T PRK06769         25 GSFTLFPFTKASLQKLKANHIKIFSFTNQPG-IADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAA  103 (173)
T ss_pred             HHeEECCCHHHHHHHHHHCCCEEEEEECCch-hcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHH
Confidence            4678999999999999999999999999874 2        13444777888777762111      1233445699999


Q ss_pred             HHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          75 KATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        75 ~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +++|++|++|+||||+..|+++|+++|+++|++.++..
T Consensus       104 ~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~  141 (173)
T PRK06769        104 EKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAG  141 (173)
T ss_pred             HHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCC
Confidence            99999999999999999999999999999999987653

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.68  E-value=6.9e-17  Score=131.64  Aligned_cols=93  Identities=18%  Similarity=0.294  Sum_probs=82.8

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCcc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYKD   83 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~~   83 (280)
                      ++++||+.++|+.|+++|++++|+||++. .. ...+.++++.++|+  .++++.       ++..|+.+++++|++|++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~-~~-~~~~~~~~l~~~f~--~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~  159 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPR-DH-AVLVQELGLRDLFD--VVIFSGDVGRGKPDPDIYLLALKKLGLKPEE  159 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCch-HH-HHHHHhcCCHHHCC--EEEEcCCCCCCCCCHHHHHHHHHHcCCCcce
Confidence            78999999999999999999999999999 66 66666799999999  665542       234499999999999999


Q ss_pred             EEEEeCCcccccccccCCCeEEEE
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v  107 (280)
                      |+||||+..|+++|+++|+.+|++
T Consensus       160 ~~~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       160 CLFVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             EEEEcCCHHHHHHHHHcCCEEEeC
Confidence            999999999999999999999975

HAD subfamilies caused by an overly broad single model.

>PLN02811 hydrolase

Probab=99.68  E-value=7.5e-17  Score=135.84  Aligned_cols=102  Identities=13%  Similarity=0.140  Sum_probs=87.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHH-HHHhhCCCccccccceEec-------CCCHHHHHHHHHHcC---
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAK-QILNLINLNQYFSNKEIYP-------GPKTTHFESLKKATG---  231 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~-~~l~~~gl~~~f~~~~~~~-------~~k~~~~~~~~~~~~---  231 (280)
                      ...++||+.++|+.|+++|++++|+||+ .+.... ..+++.++.++|+.+.+..       +|+|+.|..++++++   
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~-~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~  154 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGS-HKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGP  154 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCC-chhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999 655443 4555568889998755444       467789999999996   


Q ss_pred             CCCCcEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         232 IEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       232 ~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      ++|++|+||||+..|+++|+++||++|+|+++..
T Consensus       155 ~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~  188 (220)
T PLN02811        155 VDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRL  188 (220)
T ss_pred             CCccceEEEeccHhhHHHHHHCCCeEEEEeCCCC
Confidence            9999999999999999999999999999987653

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.68  E-value=1.1e-16  Score=130.21  Aligned_cols=100  Identities=17%  Similarity=0.196  Sum_probs=80.4

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCch--------------HHHHHHHhhcCcccccccccee------------
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI--------------QGAQQLLDLFNWNQYFDHKQIF------------   62 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--------------~~~~~~l~~~~l~~~fd~~~i~------------   62 (280)
                      ..++++||+.++|++|+++|++++|+||++..              ......+..+++.  |+  .++            
T Consensus        23 ~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~--~i~~~~~~~~~~~~~   98 (176)
T TIGR00213        23 DNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LD--GIYYCPHHPEGVEEF   98 (176)
T ss_pred             HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--cc--EEEECCCCCcccccc
Confidence            46789999999999999999999999999841              2334566666554  44  221            


Q ss_pred             ------cCCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeE-EEEcCCCc
Q psy8911          63 ------PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC-ILVEDGMT  112 (280)
Q Consensus        63 ------~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~-i~v~~~~~  112 (280)
                            ..+++..|+.+++++|++|++|+||||+..|+++|+++|+.+ +++.++..
T Consensus        99 ~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~  155 (176)
T TIGR00213        99 RQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKP  155 (176)
T ss_pred             cCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCc
Confidence                  123445599999999999999999999999999999999998 78877654

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.68  E-value=1.1e-16  Score=130.47  Aligned_cols=95  Identities=18%  Similarity=0.247  Sum_probs=84.8

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcEE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      +.++||+.++|+.|+++|++++|+||+ .... ...+.++|+.++|+.+..+     .+|+++.|..++++++++|++|+
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~-~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~  161 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNS-PRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL  161 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCC-chHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence            688999999999999999999999999 6666 6666669999999976442     24777899999999999999999


Q ss_pred             EEeCCcCCcccccccCceEEEE
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v  260 (280)
                      ||||++.|+.+|+++|+.+|+|
T Consensus       162 ~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       162 FVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             EEcCCHHHHHHHHHcCCEEEeC
Confidence            9999999999999999999975

HAD subfamilies caused by an overly broad single model.

>PRK09449 dUMP phosphatase; Provisional

Probab=99.68  E-value=4.7e-17  Score=137.30  Aligned_cols=99  Identities=12%  Similarity=0.135  Sum_probs=86.3

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCC
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGI   79 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~   79 (280)
                      +...++++||+.++|+.|+ +|++++|+||++. ..++..++.+++.++||  .++++.+       +..|..+++++|+
T Consensus        90 ~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~-~~~~~~l~~~~l~~~fd--~v~~~~~~~~~KP~p~~~~~~~~~~~~  165 (224)
T PRK09449         90 MAEICTPLPGAVELLNALR-GKVKMGIITNGFT-ELQQVRLERTGLRDYFD--LLVISEQVGVAKPDVAIFDYALEQMGN  165 (224)
T ss_pred             HhhcCccCccHHHHHHHHH-hCCeEEEEeCCcH-HHHHHHHHhCChHHHcC--EEEEECccCCCCCCHHHHHHHHHHcCC
Confidence            3345789999999999999 6899999999999 88999999999999999  6665533       2349999999998


Q ss_pred             C-CccEEEEeCCc-ccccccccCCCeEEEEcC
Q psy8911          80 E-YKDMVFFDDEE-RNSHDVSPLGVTCILVED  109 (280)
Q Consensus        80 ~-p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~  109 (280)
                      . |++|+||||+. .|+++|+++||+++++..
T Consensus       166 ~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~  197 (224)
T PRK09449        166 PDRSRVLMVGDNLHSDILGGINAGIDTCWLNA  197 (224)
T ss_pred             CCcccEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence            5 58999999998 699999999999999964

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.68  E-value=1.5e-16  Score=122.53  Aligned_cols=118  Identities=20%  Similarity=0.223  Sum_probs=99.2

Q ss_pred             eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc
Q psy8911         128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ  207 (280)
Q Consensus       128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~  207 (280)
                      +++||+||||++......              ......+++++.++|+.|+++|++++|+||+ .+..++..++.+++..
T Consensus         1 ~~vfD~D~tl~~~~~~~~--------------~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~-~~~~~~~~~~~~~~~~   65 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIA--------------EIEELELYPGVKEALKELKEKGIKLALATNK-SRREVLELLEELGLDD   65 (139)
T ss_pred             CeEEccCCceEccCcccc--------------ccccCCcCcCHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHHHcCCch
Confidence            368999999987533321              1345689999999999999999999999999 8999999999999987


Q ss_pred             ccccceEec---------------------CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911         208 YFSNKEIYP---------------------GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       208 ~f~~~~~~~---------------------~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      +|+.+....                     +|++..+..++++++.+++++++|||+..|+.+++++|+++++|
T Consensus        66 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427          66 YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            777532211                     46778899999999999999999999999999999999999875

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.67  E-value=7.9e-17  Score=134.73  Aligned_cols=101  Identities=18%  Similarity=0.203  Sum_probs=86.0

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH--HHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILH--AKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~--~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~  235 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....  ....+..+++.++|+.+..+     .+|+|..|..+++++|++|+
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~-~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~  170 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNN-FPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE  170 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCC-CCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence            4679999999999999999999999998 4432  33345567888999976443     24778899999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      +|+||||+..|+.+|+++||++|++.++.
T Consensus       171 ~~l~i~D~~~di~aA~~aG~~~i~v~~~~  199 (211)
T TIGR02247       171 ECVFLDDLGSNLKPAAALGITTIKVSDEE  199 (211)
T ss_pred             HeEEEcCCHHHHHHHHHcCCEEEEECCHH
Confidence            99999999999999999999999998643

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.67  E-value=1.6e-16  Score=133.08  Aligned_cols=103  Identities=17%  Similarity=0.201  Sum_probs=84.9

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc---Ccccccccc--ceec-CCChhHHHHHHHHhCCC
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF---NWNQYFDHK--QIFP-GQKTTHFANLKKATGIE   80 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~---~l~~~fd~~--~i~~-~~~~~~~~~~~~~~g~~   80 (280)
                      ......+|||+.++|+.|+++|++++|+||++. ..++.+++..   ++.++|+..  .+.+ .++...|..+++++|++
T Consensus        90 ~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~-~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~  168 (220)
T TIGR01691        90 GELTSHLYPDVPPALEAWLQLGLRLAVYSSGSV-PAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSP  168 (220)
T ss_pred             CCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcC
Confidence            445568999999999999999999999999999 7777777775   555555511  2222 23455699999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      |++|+||||+..|+++|+++||+++++..+
T Consensus       169 p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~  198 (220)
T TIGR01691       169 PREILFLSDIINELDAARKAGLHTGQLVRP  198 (220)
T ss_pred             hhHEEEEeCCHHHHHHHHHcCCEEEEEECC
Confidence            999999999999999999999999998553

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.67  E-value=1.3e-16  Score=132.65  Aligned_cols=95  Identities=16%  Similarity=0.246  Sum_probs=84.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++|+||+ ... ....++++|+.++|+.+.+..     +|+++.|..+++++|++|++|
T Consensus       103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~-~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~  180 (203)
T TIGR02252       103 PWQVYPDAIKLLKDLRERGLILGVISNF-DSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEA  180 (203)
T ss_pred             cceeCcCHHHHHHHHHHCCCEEEEEeCC-chh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHE
Confidence            3578999999999999999999999999 654 477899999999999764432     477788999999999999999


Q ss_pred             EEEeCCc-CCcccccccCceEEE
Q psy8911         238 VFFDDEE-RNSHDVSPLGVTCIH  259 (280)
Q Consensus       238 l~igD~~-~di~~a~~aG~~~i~  259 (280)
                      +||||+. .|+++|+++||++|+
T Consensus       181 ~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       181 LHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             EEECCCchHHHHHHHHcCCeeeC
Confidence            9999998 799999999999874

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.67  E-value=4.9e-17  Score=136.01  Aligned_cols=101  Identities=22%  Similarity=0.276  Sum_probs=84.3

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHH--HHHHHhhcCccccccccceecCC-----C--hhHHHHHHHHhCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG--AQQLLDLFNWNQYFDHKQIFPGQ-----K--TTHFANLKKATGI   79 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~--~~~~l~~~~l~~~fd~~~i~~~~-----~--~~~~~~~~~~~g~   79 (280)
                      ..++++||+.++|+.|+++|++++|+||++. ..  ....+...++.++||  .++++.     |  +..|+.+++++|+
T Consensus        91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~-~~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~KP~p~~~~~~~~~~g~  167 (211)
T TIGR02247        91 ENTKLRPSMMAAIKTLRAKGFKTACITNNFP-TDHSAEEALLPGDIMALFD--AVVESCLEGLRKPDPRIYQLMLERLGV  167 (211)
T ss_pred             cccccChhHHHHHHHHHHCCCeEEEEeCCCC-ccchhhhHhhhhhhHhhCC--EEEEeeecCCCCCCHHHHHHHHHHcCC
Confidence            3578999999999999999999999999976 33  333445568889999  665543     2  3349999999999


Q ss_pred             CCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|++|+||||+..|+.+|+++||++|++.++..
T Consensus       168 ~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~  200 (211)
T TIGR02247       168 APEECVFLDDLGSNLKPAAALGITTIKVSDEEQ  200 (211)
T ss_pred             CHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHH
Confidence            999999999999999999999999999976543

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.67  E-value=1.9e-16  Score=139.44  Aligned_cols=127  Identities=16%  Similarity=0.149  Sum_probs=103.7

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      .+.+.+|.||||.+.......        ..  .......++||+.++|+.|+++|++++++||+ +....+..++++++
T Consensus       158 ~~~~~~D~dgtl~~~~~~~~~--------~~--~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r-~~~~~~~~l~~l~~  226 (300)
T PHA02530        158 PKAVIFDIDGTLAKMGGRSPY--------DW--TKVKEDKPNPMVVELVKMYKAAGYEIIVVSGR-DGVCEEDTVEWLRQ  226 (300)
T ss_pred             CCEEEEECCCcCcCCCCCCcc--------ch--hhcccCCCChhHHHHHHHHHhCCCEEEEEeCC-ChhhHHHHHHHHHH
Confidence            357899999999864221100        00  01123578999999999999999999999999 88889999999999


Q ss_pred             cc-ccccceEec------------CCCHHHHHHHHHHcCC-CCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         206 NQ-YFSNKEIYP------------GPKTTHFESLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       206 ~~-~f~~~~~~~------------~~k~~~~~~~~~~~~~-~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      .. ||+.+....            +|++..+..++++++. +|++|+||||+.+|+++|+++||.+++|.+|
T Consensus       227 ~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g  298 (300)
T PHA02530        227 TDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG  298 (300)
T ss_pred             cCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence            97 898654333            4667889999999988 6899999999999999999999999999887

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.66  E-value=1.6e-16  Score=125.46  Aligned_cols=100  Identities=16%  Similarity=0.158  Sum_probs=81.4

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCc--------------hHHHHHHHhhcCccc--ccccccee-------cCCC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSE--------------IQGAQQLLDLFNWNQ--YFDHKQIF-------PGQK   66 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--------------~~~~~~~l~~~~l~~--~fd~~~i~-------~~~~   66 (280)
                      .+++|||+.++|+.|+++||+++|+||++.              ...++..++.+++..  +|.. .+.       ..++
T Consensus        25 ~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~~~~~KP~  103 (147)
T TIGR01656        25 DWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADNCSCRKPK  103 (147)
T ss_pred             HeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCCCCCCCCC
Confidence            468999999999999999999999999873              135667888888862  2221 111       1244


Q ss_pred             hhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          67 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        67 ~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++.|+.+++++|++|++|+||||+..|+++|+++|+++++++++
T Consensus       104 ~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       104 PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence            55699999999999999999999999999999999999999764

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.66  E-value=1.2e-16  Score=132.75  Aligned_cols=93  Identities=19%  Similarity=0.347  Sum_probs=82.2

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~   82 (280)
                      ...++||+.++|+.|+++|++++|+||++. . .+..++.+++.++||  .++++++       ...|+.+++++|++|+
T Consensus       103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~-~~~~l~~~~l~~~fd--~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~  178 (203)
T TIGR02252       103 PWQVYPDAIKLLKDLRERGLILGVISNFDS-R-LRGLLEALGLLEYFD--FVVTSYEVGAEKPDPKIFQEALERAGISPE  178 (203)
T ss_pred             cceeCcCHHHHHHHHHHCCCEEEEEeCCch-h-HHHHHHHCCcHHhcc--eEEeecccCCCCCCHHHHHHHHHHcCCChh
Confidence            457999999999999999999999999987 5 578899999999999  6665432       2349999999999999


Q ss_pred             cEEEEeCCc-ccccccccCCCeEEE
Q psy8911          83 DMVFFDDEE-RNSHDVSPLGVTCIL  106 (280)
Q Consensus        83 ~~l~v~D~~-~~i~aa~~~G~~~i~  106 (280)
                      +|+||||+. .|+++|+++||++||
T Consensus       179 ~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       179 EALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             HEEEECCCchHHHHHHHHcCCeeeC
Confidence            999999997 799999999999985

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.66  E-value=2.6e-16  Score=132.55  Aligned_cols=99  Identities=10%  Similarity=0.106  Sum_probs=90.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHc-CCCCCc
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKAT-GIEYKD  236 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~-~~~~~~  236 (280)
                      .++++||+.++|+.|+++ ++++|+||+ ....++..++++++..+|+.+.++.     +|+++.|..+++++ +++|++
T Consensus        95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~-~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~  172 (224)
T TIGR02254        95 GHQLLPGAFELMENLQQK-FRLYIVTNG-VRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE  172 (224)
T ss_pred             cCeeCccHHHHHHHHHhc-CcEEEEeCC-chHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence            467999999999999999 999999999 8888899999999999999765432     37788999999999 999999


Q ss_pred             EEEEeCCc-CCcccccccCceEEEECCC
Q psy8911         237 MVFFDDEE-RNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       237 ~l~igD~~-~di~~a~~aG~~~i~v~~g  263 (280)
                      |+||||+. +|+++|+++||++|+++++
T Consensus       173 ~v~igD~~~~di~~A~~~G~~~i~~~~~  200 (224)
T TIGR02254       173 VLMIGDSLTADIKGGQNAGLDTCWMNPD  200 (224)
T ss_pred             eEEECCCcHHHHHHHHHCCCcEEEECCC
Confidence            99999998 7999999999999999865

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.66  E-value=2e-16  Score=126.43  Aligned_cols=98  Identities=15%  Similarity=0.141  Sum_probs=83.7

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCC---------------chHHHHHHHhhcCccccccccce-ec----C---
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTS---------------EIQGAQQLLDLFNWNQYFDHKQI-FP----G---   64 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~---------------~~~~~~~~l~~~~l~~~fd~~~i-~~----~---   64 (280)
                      ...+++|||+.++|++|+++|++++|+||++               . ..++.+++.+|+.  |+  .+ ++    +   
T Consensus        25 ~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~-~~~~~~l~~~gl~--fd--~ii~~~~~~~~~~   99 (161)
T TIGR01261        25 LEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPH-NLMLQIFRSQGII--FD--DVLICPHFPDDNC   99 (161)
T ss_pred             HHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHH-HHHHHHHHHCCCc--ee--EEEECCCCCCCCC
Confidence            3467899999999999999999999999974               4 5678889999996  76  33 33    2   


Q ss_pred             ----CChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          65 ----QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        65 ----~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                          ++.+.|+.++++++++|++|+||||+..|+++|+++|++++++..+
T Consensus       100 ~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~  149 (161)
T TIGR01261       100 DCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEE  149 (161)
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence                2234599999999999999999999999999999999999999764

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PLN02940 riboflavin kinase

Probab=99.66  E-value=1.6e-16  Score=143.98  Aligned_cols=100  Identities=20%  Similarity=0.280  Sum_probs=89.9

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHh-hcCccccccccceecCCCh-------hHHHHHHHHhCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLD-LFNWNQYFDHKQIFPGQKT-------THFANLKKATGIE   80 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~-~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~   80 (280)
                      ..+.++||+.++|+.|+++|++++|+||++. ..++..++ .+++.++||  .+++++++       ..|+.+++++|++
T Consensus        90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~-~~~~~~l~~~~gl~~~Fd--~ii~~d~v~~~KP~p~~~~~a~~~lgv~  166 (382)
T PLN02940         90 CNIKALPGANRLIKHLKSHGVPMALASNSPR-ANIEAKISCHQGWKESFS--VIVGGDEVEKGKPSPDIFLEAAKRLNVE  166 (382)
T ss_pred             ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHhccChHhhCC--EEEehhhcCCCCCCHHHHHHHHHHcCCC
Confidence            4578999999999999999999999999999 78888887 789999999  77766432       3499999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|+||||+..|+++|+++|+.+|+++++.
T Consensus       167 p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~  197 (382)
T PLN02940        167 PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIP  197 (382)
T ss_pred             hhHEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence            9999999999999999999999999998754

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.66  E-value=3.5e-16  Score=136.75  Aligned_cols=100  Identities=15%  Similarity=0.158  Sum_probs=86.3

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccc---cceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS---NKEIY-----PGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~---~~~~~-----~~~k~~~~~~~~~~~~~~~~  235 (280)
                      ++++||+.++|+.|+++|++++|+||+ ....+...+++++...+|+   .+ ..     .+|+|+.|..+++++|++|+
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~-~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~  220 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTS-NEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPS  220 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChH
Confidence            579999999999999999999999999 8888888888775444444   22 21     24777899999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|+||||+..|+++|+++||.+|+|.+|..
T Consensus       221 ~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~  250 (286)
T PLN02779        221 RCVVVEDSVIGLQAAKAAGMRCIVTKSSYT  250 (286)
T ss_pred             HEEEEeCCHHhHHHHHHcCCEEEEEccCCc
Confidence            999999999999999999999999988754

>PLN02954 phosphoserine phosphatase

Probab=99.65  E-value=1.6e-16  Score=134.02  Aligned_cols=97  Identities=21%  Similarity=0.274  Sum_probs=80.4

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc--cccccce--------E---------ecCCCHHHHH
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNKE--------I---------YPGPKTTHFE  224 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~--~~f~~~~--------~---------~~~~k~~~~~  224 (280)
                      ..++||+.++|+.|+++|++++|+|++ ....++.+++.+|+.  .+|....        .         ...+|+..++
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~-~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~  161 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGG-FRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ  161 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCC-cHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence            568999999999999999999999999 889999999999997  4664210        0         1235788899


Q ss_pred             HHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         225 SLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       225 ~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      .++++++.  ++|+||||+.+|+++|+++|+.++....+
T Consensus       162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~  198 (224)
T PLN02954        162 HIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGG  198 (224)
T ss_pred             HHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCC
Confidence            99998875  69999999999999999989887765444

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.65  E-value=5.5e-16  Score=126.65  Aligned_cols=103  Identities=19%  Similarity=0.149  Sum_probs=82.3

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCc--------------hHHHHHHHhhcCccccccccceec---------
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSE--------------IQGAQQLLDLFNWNQYFDHKQIFP---------   63 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--------------~~~~~~~l~~~~l~~~fd~~~i~~---------   63 (280)
                      ....+.++||+.++|++|+++|++++|+||++.              .+.....++.+++  +|+  .++.         
T Consensus        24 ~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~--~i~~~~~~~~~~~   99 (181)
T PRK08942         24 SPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLD--GIYYCPHHPEDGC   99 (181)
T ss_pred             CHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccc--eEEECCCCCCCCC
Confidence            345678999999999999999999999999973              0234455666776  366  3321         


Q ss_pred             ---CCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCch
Q psy8911          64 ---GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        64 ---~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                         .+++..|+.+++++|++|++|+||||+..|+.+|+++|+.++++.++...
T Consensus       100 ~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~  152 (181)
T PRK08942        100 DCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGV  152 (181)
T ss_pred             cCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCc
Confidence               12234499999999999999999999999999999999999999876543

>PLN02811 hydrolase

Probab=99.65  E-value=2.2e-16  Score=133.02  Aligned_cols=99  Identities=11%  Similarity=0.200  Sum_probs=84.2

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHH-HHhhcCccccccccceecCC--Ch-------hHHHHHHHHhC-
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQ-LLDLFNWNQYFDHKQIFPGQ--KT-------THFANLKKATG-   78 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~-~l~~~~l~~~fd~~~i~~~~--~~-------~~~~~~~~~~g-   78 (280)
                      .+.++||+.++|+.|+++|++++|+||++. ..... .++..++.++|+  .+++++  ++       ..|+.+++++| 
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~-~~~~~~~~~~~~l~~~f~--~i~~~~~~~~~~~KP~p~~~~~a~~~~~~  152 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGSHK-RHFDLKTQRHGELFSLMH--HVVTGDDPEVKQGKPAPDIFLAAARRFED  152 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCCch-hhHHHHHcccHHHHhhCC--EEEECChhhccCCCCCcHHHHHHHHHhCC
Confidence            578899999999999999999999999987 54443 444457889999  666665  22       34999999996 


Q ss_pred             --CCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          79 --IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        79 --~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                        ++|++|+||||+..|+++|+++|+++|++.++.
T Consensus       153 ~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~  187 (220)
T PLN02811        153 GPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPR  187 (220)
T ss_pred             CCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCC
Confidence              999999999999999999999999999997654

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.64  E-value=2.3e-16  Score=128.94  Aligned_cols=94  Identities=21%  Similarity=0.367  Sum_probs=83.6

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ..+.++||+.++|+.|+++|++++++||+ .  .++..++.+++.+||+  .+++++       ++..|..+++++|++|
T Consensus        85 ~~~~~~~g~~~~l~~l~~~g~~i~i~S~~-~--~~~~~l~~~~l~~~f~--~v~~~~~~~~~kp~~~~~~~~~~~~~~~~  159 (185)
T TIGR02009        85 TGAEVLPGIENFLKRLKKKGIAVGLGSSS-K--NADRILAKLGLTDYFD--AIVDADEVKEGKPHPETFLLAAELLGVSP  159 (185)
T ss_pred             cCCCCCcCHHHHHHHHHHcCCeEEEEeCc-h--hHHHHHHHcChHHHCC--EeeehhhCCCCCCChHHHHHHHHHcCCCH
Confidence            34789999999999999999999999998 4  4788999999999999  666543       2334999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEE
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v  107 (280)
                      ++|+||||+..|+++|+++|+++|+|
T Consensus       160 ~~~v~IgD~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       160 NECVVFEDALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             HHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence            99999999999999999999999875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.64  E-value=2.9e-16  Score=132.26  Aligned_cols=97  Identities=11%  Similarity=0.165  Sum_probs=87.9

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHh-CCCC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKAT-GIEY   81 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~-g~~p   81 (280)
                      .++++||+.++|+.|+++ ++++|+||++. ..++..++.+++..+||  .++++.+       +..|+.+++++ |++|
T Consensus        95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~-~~~~~~l~~~~l~~~fd--~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~  170 (224)
T TIGR02254        95 GHQLLPGAFELMENLQQK-FRLYIVTNGVR-ETQYKRLRKSGLFPFFD--DIFVSEDAGIQKPDKEIFNYALERMPKFSK  170 (224)
T ss_pred             cCeeCccHHHHHHHHHhc-CcEEEEeCCch-HHHHHHHHHCCcHhhcC--EEEEcCccCCCCCCHHHHHHHHHHhcCCCc
Confidence            478999999999999999 99999999999 89999999999999999  6766533       23499999999 9999


Q ss_pred             ccEEEEeCCc-ccccccccCCCeEEEEcCC
Q psy8911          82 KDMVFFDDEE-RNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        82 ~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++|+||||+. .|+++|+++||++|++.++
T Consensus       171 ~~~v~igD~~~~di~~A~~~G~~~i~~~~~  200 (224)
T TIGR02254       171 EEVLMIGDSLTADIKGGQNAGLDTCWMNPD  200 (224)
T ss_pred             hheEEECCCcHHHHHHHHHCCCcEEEECCC
Confidence            9999999998 7999999999999999654

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.64  E-value=8.8e-16  Score=118.90  Aligned_cols=97  Identities=21%  Similarity=0.229  Sum_probs=82.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCC--------chHHHHHHHhhcCcccccccccee---cCCChhHHHHHHHHh
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTS--------EIQGAQQLLDLFNWNQYFDHKQIF---PGQKTTHFANLKKAT   77 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~--------~~~~~~~~l~~~~l~~~fd~~~i~---~~~~~~~~~~~~~~~   77 (280)
                      .+..+|||+.++|+.|+++|++++|+||++        . ..++..++.+++...|.  .+.   ..++.+.|+.+++++
T Consensus        22 ~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~-~~~~~~l~~~~l~~~~~--~~~~~~~KP~~~~~~~~~~~~   98 (132)
T TIGR01662        22 DERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSS-GRVARRLEELGVPIDVL--YACPHCRKPKPGMFLEALKRF   98 (132)
T ss_pred             HHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHH-HHHHHHHHHCCCCEEEE--EECCCCCCCChHHHHHHHHHc
Confidence            346899999999999999999999999999        7 77889999999864333  221   133445699999999


Q ss_pred             -CCCCccEEEEeC-CcccccccccCCCeEEEEc
Q psy8911          78 -GIEYKDMVFFDD-EERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        78 -g~~p~~~l~v~D-~~~~i~aa~~~G~~~i~v~  108 (280)
                       +++|++|+|||| +..|+.+|+++|+.+|+++
T Consensus        99 ~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662        99 NEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             CCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence             599999999999 7999999999999999985

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.64  E-value=4.5e-16  Score=136.05  Aligned_cols=101  Identities=15%  Similarity=0.262  Sum_probs=84.0

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCcc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYKD   83 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~~   83 (280)
                      ++++||+.++|+.|+++|++++|+||++. ..+..+++.++...+|+...+++++       ++..|..+++++|++|++
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~-~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~  221 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNE-KAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR  221 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence            58999999999999999999999999999 8888888877544444421122332       233499999999999999


Q ss_pred             EEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      |+||||+..|+++|+++||.+|++.++..
T Consensus       222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~  250 (286)
T PLN02779        222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYT  250 (286)
T ss_pred             EEEEeCCHHhHHHHHHcCCEEEEEccCCc
Confidence            99999999999999999999999977643

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.64  E-value=3.6e-16  Score=128.02  Aligned_cols=94  Identities=22%  Similarity=0.377  Sum_probs=84.6

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe---------cCCCHHHHHHHHHHcCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY---------PGPKTTHFESLKKATGIE  233 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~---------~~~k~~~~~~~~~~~~~~  233 (280)
                      .+.++||+.++|+.|+   ++++|+||+ ....+...++++|+.++|+.+.+.         .+|+|+.|+.+++++|++
T Consensus        82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~-~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~  157 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP---GRKIIFTNG-DRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD  157 (184)
T ss_pred             hCCCCHHHHHHHHhCC---CCEEEEeCC-CHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence            4568999999999998   479999999 888999999999999999976443         256778999999999999


Q ss_pred             CCcEEEEeCCcCCcccccccCceEEEE
Q psy8911         234 YKDMVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       234 ~~~~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      |++|+||||++.|+++|+++|+++|+|
T Consensus       158 ~~~~l~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       158 PERAIFFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence            999999999999999999999999875

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.64  E-value=5.9e-16  Score=130.78  Aligned_cols=98  Identities=18%  Similarity=0.316  Sum_probs=87.9

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChh-------HHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTT-------HFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~-------~~~~~~~~~g~~p~   82 (280)
                      .++++|++.++|+.|+++ ++++|+||+.. ..++..++.+|+.++||  .++.+++.+       .|..+++++|++|+
T Consensus        97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~-~~~~~~l~~~gl~~~Fd--~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~  172 (229)
T COG1011          97 LLPDYPEALEALKELGKK-YKLGILTNGAR-PHQERKLRQLGLLDYFD--AVFISEDVGVAKPDPEIFEYALEKLGVPPE  172 (229)
T ss_pred             hCccChhHHHHHHHHHhh-ccEEEEeCCCh-HHHHHHHHHcCChhhhh--eEEEecccccCCCCcHHHHHHHHHcCCCcc
Confidence            478999999999999999 99999999988 89999999999999999  777665443       39999999999999


Q ss_pred             cEEEEeCCccc-ccccccCCCeEEEEcCCC
Q psy8911          83 DMVFFDDEERN-SHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        83 ~~l~v~D~~~~-i~aa~~~G~~~i~v~~~~  111 (280)
                      +|+||||+..+ |.+|+++||++||+..+.
T Consensus       173 ~~l~VgD~~~~di~gA~~~G~~~vwi~~~~  202 (229)
T COG1011         173 EALFVGDSLENDILGARALGMKTVWINRGG  202 (229)
T ss_pred             eEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence            99999999775 599999999999996543

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.63  E-value=5.4e-16  Score=134.67  Aligned_cols=100  Identities=24%  Similarity=0.400  Sum_probs=90.2

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~   82 (280)
                      ...++||+.++|+.|+++|++++|+||++. ..++..++.+++..+|+  .+++++.       +..|+.+++++|++|+
T Consensus        99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~-~~~~~~l~~~~i~~~f~--~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~  175 (272)
T PRK13223         99 LTVVYPGVRDTLKWLKKQGVEMALITNKPE-RFVAPLLDQMKIGRYFR--WIIGGDTLPQKKPDPAALLFVMKMAGVPPS  175 (272)
T ss_pred             CCccCCCHHHHHHHHHHCCCeEEEEECCcH-HHHHHHHHHcCcHhhCe--EEEecCCCCCCCCCcHHHHHHHHHhCCChh
Confidence            467899999999999999999999999999 88999999999999999  6666532       2349999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|+||||+.+|+++|+++|+++++|.++..
T Consensus       176 ~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~  205 (272)
T PRK13223        176 QSLFVGDSRSDVLAAKAAGVQCVALSYGYN  205 (272)
T ss_pred             HEEEECCCHHHHHHHHHCCCeEEEEecCCC
Confidence            999999999999999999999999987653

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.63  E-value=6e-16  Score=126.59  Aligned_cols=118  Identities=13%  Similarity=0.093  Sum_probs=92.8

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCC-HHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRG-VPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      .++++.||+||||++......             .....+..+.- =...++.|+++|++++|+||+ ....+...++++
T Consensus        20 ~ikli~~D~Dgtl~~~~i~~~-------------~~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~-~~~~v~~~l~~l   85 (183)
T PRK09484         20 NIRLLICDVDGVFSDGLIYMG-------------NNGEELKAFNVRDGYGIRCLLTSGIEVAIITGR-KSKLVEDRMTTL   85 (183)
T ss_pred             CceEEEEcCCeeeecCEEEEc-------------CCCCEEEEEeccchHHHHHHHHCCCEEEEEeCC-CcHHHHHHHHHc
Confidence            478999999999997422110             11111211111 024678889999999999999 888899999999


Q ss_pred             CCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         204 NLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       204 gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      |+..+|+.    ..+|+..+..+++++|++|++++||||+.+|+.+++++|+.++ +.
T Consensus        86 gl~~~f~g----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~  138 (183)
T PRK09484         86 GITHLYQG----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VA  138 (183)
T ss_pred             CCceeecC----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cC
Confidence            99999873    3578899999999999999999999999999999999999954 54

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.63  E-value=1.1e-15  Score=129.13  Aligned_cols=133  Identities=10%  Similarity=0.055  Sum_probs=93.7

Q ss_pred             eEEEecCCCCCCccccccc--Ccccc----c--C----CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC---c
Q psy8911         128 HLSKKLDYTLWPLHVHDLV--APFKK----I--G----QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS---E  192 (280)
Q Consensus       128 ~~~fd~DgTL~d~~~~~~~--~~~~~----~--~----~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~---~  192 (280)
                      .++||+|||++|.......  ..|..    .  .    ..+.........++||++++|+.|+++|++++++||+.   .
T Consensus        65 av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~  144 (237)
T PRK11009         65 AVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKT  144 (237)
T ss_pred             EEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence            8899999999984222111  11110    0  0    01111123457799999999999999999999999951   3


Q ss_pred             HHHHHHHHhhCCC--ccccccceEecCC-CHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         193 ILHAKQILNLINL--NQYFSNKEIYPGP-KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       193 ~~~~~~~l~~~gl--~~~f~~~~~~~~~-k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      ...++.+++++|+  .++|+.+..++.. |+... .+++++++    ++||||+..|+++|++||+.+|.|.+|+.
T Consensus       145 ~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~-~~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~  215 (237)
T PRK11009        145 ETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKT-QWLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN  215 (237)
T ss_pred             HHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHH-HHHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence            5577778888999  8899864433321 22222 35566665    99999999999999999999999998864

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.62  E-value=5.9e-16  Score=130.38  Aligned_cols=96  Identities=13%  Similarity=0.225  Sum_probs=84.0

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ..++++||+.++|+.|   +++++|+||++. ..++..++.+++.++|+. .+++++       ++..|..+++++|++|
T Consensus        85 ~~~~~~~gv~~~L~~L---~~~~~ivTn~~~-~~~~~~l~~~~l~~~F~~-~v~~~~~~~~~KP~p~~~~~a~~~~~~~p  159 (221)
T PRK10563         85 SELEPIAGANALLESI---TVPMCVVSNGPV-SKMQHSLGKTGMLHYFPD-KLFSGYDIQRWKPDPALMFHAAEAMNVNV  159 (221)
T ss_pred             ccCCcCCCHHHHHHHc---CCCEEEEeCCcH-HHHHHHHHhcChHHhCcc-eEeeHHhcCCCCCChHHHHHHHHHcCCCH
Confidence            4578999999999999   499999999998 889999999999999962 344432       2345999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      ++|+||||++.|+++|+++|++++++..
T Consensus       160 ~~~l~igDs~~di~aA~~aG~~~i~~~~  187 (221)
T PRK10563        160 ENCILVDDSSAGAQSGIAAGMEVFYFCA  187 (221)
T ss_pred             HHeEEEeCcHhhHHHHHHCCCEEEEECC
Confidence            9999999999999999999999999854

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.61  E-value=1.5e-15  Score=128.10  Aligned_cols=100  Identities=19%  Similarity=0.321  Sum_probs=90.3

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ....++||+.++|+.|+++|++++|+||+.. ...+.+++.+++..+|+  .+++++       ++..|+.++++++++|
T Consensus        90 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~  166 (226)
T PRK13222         90 GGSRLYPGVKETLAALKAAGYPLAVVTNKPT-PFVAPLLEALGIADYFS--VVIGGDSLPNKKPDPAPLLLACEKLGLDP  166 (226)
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHcCCccCcc--EEEcCCCCCCCCcChHHHHHHHHHcCCCh
Confidence            4578999999999999999999999999999 88999999999999999  666543       2344999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ++|++|||+.+|+++|+++|++++++.++.
T Consensus       167 ~~~i~igD~~~Di~~a~~~g~~~i~v~~g~  196 (226)
T PRK13222        167 EEMLFVGDSRNDIQAARAAGCPSVGVTYGY  196 (226)
T ss_pred             hheEEECCCHHHHHHHHHCCCcEEEECcCC
Confidence            999999999999999999999999998664

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.61  E-value=9.2e-16  Score=125.85  Aligned_cols=95  Identities=17%  Similarity=0.286  Sum_probs=84.7

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p   81 (280)
                      ..+.++|+ .++|..|+++ ++++|+||++. ..++..++.+++.+|||  .+++++++       ..|..+++++|++|
T Consensus        85 ~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~-~~~~~~l~~~~l~~~fd--~i~~~~~~~~~KP~p~~~~~~~~~~~~~~  159 (188)
T PRK10725         85 DSVEPLPL-IEVVKAWHGR-RPMAVGTGSES-AIAEALLAHLGLRRYFD--AVVAADDVQHHKPAPDTFLRCAQLMGVQP  159 (188)
T ss_pred             ccCCCccH-HHHHHHHHhC-CCEEEEcCCch-HHHHHHHHhCCcHhHce--EEEehhhccCCCCChHHHHHHHHHcCCCH
Confidence            45678885 6999999876 99999999999 89999999999999999  77766432       34999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEc
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~  108 (280)
                      ++|+||||+..|+++|+++|+++|++.
T Consensus       160 ~~~l~igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        160 TQCVVFEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             HHeEEEeccHhhHHHHHHCCCEEEeec
Confidence            999999999999999999999999884

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.61  E-value=4.7e-15  Score=115.31  Aligned_cols=110  Identities=17%  Similarity=0.136  Sum_probs=94.5

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      +.+++|+|.||++-                     ..-.+-|.+++.+..++++|+++.|+||+ .+..+....+.+|+.
T Consensus        29 kgvi~DlDNTLv~w---------------------d~~~~tpe~~~W~~e~k~~gi~v~vvSNn-~e~RV~~~~~~l~v~   86 (175)
T COG2179          29 KGVILDLDNTLVPW---------------------DNPDATPELRAWLAELKEAGIKVVVVSNN-KESRVARAAEKLGVP   86 (175)
T ss_pred             cEEEEeccCceecc---------------------cCCCCCHHHHHHHHHHHhcCCEEEEEeCC-CHHHHHhhhhhcCCc
Confidence            68899999999741                     12235589999999999999999999999 888888899999887


Q ss_pred             cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcC-CcccccccCceEEEECC
Q psy8911         207 QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       207 ~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~~aG~~~i~v~~  262 (280)
                      -++-.    .+|-+..|.+++++++++|++|+||||... |+.+++.+||+||.|..
T Consensus        87 fi~~A----~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179          87 FIYRA----KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             eeecc----cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence            44432    357778899999999999999999999987 99999999999999963

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.60  E-value=8.4e-16  Score=135.81  Aligned_cols=97  Identities=18%  Similarity=0.144  Sum_probs=83.9

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc-------ce--------EecCCCHHHHHHH
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-------KE--------IYPGPKTTHFESL  226 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~-------~~--------~~~~~k~~~~~~~  226 (280)
                      ..++++||+.++|+.|++.|++++|+|++ ....++..++++|+...|..       ..        ....+|++.++.+
T Consensus       178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg-~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l  256 (322)
T PRK11133        178 ENLPLMPGLTELVLKLQALGWKVAIASGG-FTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL  256 (322)
T ss_pred             HhCCCChhHHHHHHHHHHcCCEEEEEECC-cchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence            45789999999999999999999999999 77788889999999875531       00        0124788999999


Q ss_pred             HHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         227 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       227 ~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      ++++|+++++|++|||+.+|+..+++||+.+++
T Consensus       257 a~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~  289 (322)
T PRK11133        257 AQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY  289 (322)
T ss_pred             HHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999999998775

>KOG2914|consensus

Probab=99.60  E-value=5.9e-16  Score=128.66  Aligned_cols=101  Identities=16%  Similarity=0.166  Sum_probs=89.2

Q ss_pred             CceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC-CccccccceEec-------CCCHHHHHHHHHHcCC
Q psy8911         161 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN-LNQYFSNKEIYP-------GPKTTHFESLKKATGI  232 (280)
Q Consensus       161 ~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g-l~~~f~~~~~~~-------~~k~~~~~~~~~~~~~  232 (280)
                      .....++||+.++++.|+.+|++++++|+. .+...+..+.+++ +...|..+..++       +|.|++|..+++++|.
T Consensus        88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s-~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~  166 (222)
T KOG2914|consen   88 FMNSILMPGAEKLVNHLKNNGIPVALATSS-TSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGV  166 (222)
T ss_pred             ccccccCCcHHHHHHHHHhCCCCeeEEecC-CcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCC
Confidence            345689999999999999999999999999 8888888888876 777787655422       3778999999999999


Q ss_pred             CC-CcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         233 EY-KDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       233 ~~-~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +| +.|++|+|++.++++|++|||++|+|++
T Consensus       167 ~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  167 PPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             CCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence            99 9999999999999999999999999986

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.60  E-value=1.1e-15  Score=125.01  Aligned_cols=92  Identities=24%  Similarity=0.386  Sum_probs=82.3

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC---------C--hhHHHHHHHHhC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ---------K--TTHFANLKKATG   78 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~---------~--~~~~~~~~~~~g   78 (280)
                      .++++||+.++|+.|+   ++++|+||++. ..++..++.+|+.++||  .+++++         |  +..|+.+++++|
T Consensus        82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~-~~~~~~l~~~gl~~~fd--~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~  155 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP---GRKIIFTNGDR-AHARRALNRLGIEDCFD--GIFCFDTANPDYLLPKPSPQAYEKALREAG  155 (184)
T ss_pred             hCCCCHHHHHHHHhCC---CCEEEEeCCCH-HHHHHHHHHcCcHhhhC--eEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence            4678999999999998   58999999999 89999999999999999  666542         2  234999999999


Q ss_pred             CCCccEEEEeCCcccccccccCCCeEEEE
Q psy8911          79 IEYKDMVFFDDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v  107 (280)
                      ++|++|+||||+..|+++|+++|+++|+|
T Consensus       156 ~~~~~~l~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       156 VDPERAIFFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             CCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence            99999999999999999999999999975

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.59  E-value=2.3e-15  Score=128.30  Aligned_cols=94  Identities=12%  Similarity=0.160  Sum_probs=82.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+++ ++++|+||+ ...     ++++||.+||+.+....     +|+++.|..+++++|++|++|
T Consensus       111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~-~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~  183 (238)
T PRK10748        111 RIDVPQATHDTLKQLAKK-WPLVAITNG-NAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEI  183 (238)
T ss_pred             cCCCCccHHHHHHHHHcC-CCEEEEECC-Cch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHE
Confidence            467899999999999976 999999998 443     47899999999764432     478899999999999999999


Q ss_pred             EEEeCCc-CCcccccccCceEEEECCC
Q psy8911         238 VFFDDEE-RNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       238 l~igD~~-~di~~a~~aG~~~i~v~~g  263 (280)
                      +||||++ .|+++|+++||+++++..+
T Consensus       184 ~~VGD~~~~Di~~A~~aG~~~i~v~~~  210 (238)
T PRK10748        184 LHVGDDLTTDVAGAIRCGMQACWINPE  210 (238)
T ss_pred             EEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence            9999995 9999999999999999753

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.59  E-value=1.3e-15  Score=129.88  Aligned_cols=94  Identities=13%  Similarity=0.235  Sum_probs=81.4

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIE   80 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~   80 (280)
                      ...+.++||+.++|+.|+++ ++++|+||++. .     ++.+|+.+|||  .++++++       ...|+.+++++|++
T Consensus       109 ~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~-~-----~~~~gl~~~fd--~i~~~~~~~~~KP~p~~~~~a~~~~~~~  179 (238)
T PRK10748        109 RSRIDVPQATHDTLKQLAKK-WPLVAITNGNA-Q-----PELFGLGDYFE--FVLRAGPHGRSKPFSDMYHLAAEKLNVP  179 (238)
T ss_pred             hhcCCCCccHHHHHHHHHcC-CCEEEEECCCc-h-----HHHCCcHHhhc--eeEecccCCcCCCcHHHHHHHHHHcCCC
Confidence            34578999999999999975 99999999988 4     37789999999  6665532       23499999999999


Q ss_pred             CccEEEEeCC-cccccccccCCCeEEEEcCC
Q psy8911          81 YKDMVFFDDE-ERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        81 p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~  110 (280)
                      |++|+||||+ ..|+.+|+++||+++++..+
T Consensus       180 ~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~  210 (238)
T PRK10748        180 IGEILHVGDDLTTDVAGAIRCGMQACWINPE  210 (238)
T ss_pred             hhHEEEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence            9999999999 59999999999999999654

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.56  E-value=1.2e-14  Score=117.52  Aligned_cols=98  Identities=17%  Similarity=0.162  Sum_probs=83.8

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCC-chHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTS-EIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~-~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~   88 (280)
                      ...++||+.++|+.|+++|++++|+||++ . ..++.+++.+++..++.  .  ..++...|..+++++|++|++|+|||
T Consensus        41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~-~~~~~~~~~~gl~~~~~--~--~KP~p~~~~~~l~~~~~~~~~~l~IG  115 (170)
T TIGR01668        41 HNEAYPALRDWIEELKAAGRKLLIVSNNAGE-QRAKAVEKALGIPVLPH--A--VKPPGCAFRRAHPEMGLTSEQVAVVG  115 (170)
T ss_pred             CCCcChhHHHHHHHHHHcCCEEEEEeCCchH-HHHHHHHHHcCCEEEcC--C--CCCChHHHHHHHHHcCCCHHHEEEEC
Confidence            45889999999999999999999999999 5 67777778888755443  1  24455669999999999999999999


Q ss_pred             CCc-ccccccccCCCeEEEEcCCCc
Q psy8911          89 DEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        89 D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      |+. .|+.+|+++|+.+|++.++..
T Consensus       116 Ds~~~Di~aA~~aGi~~i~v~~g~~  140 (170)
T TIGR01668       116 DRLFTDVMGGNRNGSYTILVEPLVH  140 (170)
T ss_pred             CcchHHHHHHHHcCCeEEEEccCcC
Confidence            998 699999999999999987653

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.56  E-value=8.2e-15  Score=136.38  Aligned_cols=98  Identities=18%  Similarity=0.330  Sum_probs=87.2

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC------ChhHHHHHHHHhCCCCc
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ------KTTHFANLKKATGIEYK   82 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~------~~~~~~~~~~~~g~~p~   82 (280)
                      ..+++|||+.++|++|+++|++++|+||++. ..++..++.+++.+||+  .+++++      ++..|..+++++  +|+
T Consensus       327 ~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~-~~~~~~l~~~~l~~~f~--~i~~~d~v~~~~kP~~~~~al~~l--~~~  401 (459)
T PRK06698        327 GKGALYPNVKEIFTYIKENNCSIYIASNGLT-EYLRAIVSYYDLDQWVT--ETFSIEQINSLNKSDLVKSILNKY--DIK  401 (459)
T ss_pred             cCCCcCCCHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHCCcHhhcc--eeEecCCCCCCCCcHHHHHHHHhc--Ccc
Confidence            3578999999999999999999999999999 99999999999999999  666653      334588888876  579


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +|++|||+++|+++|+++|+.+|++.++.
T Consensus       402 ~~v~VGDs~~Di~aAk~AG~~~I~v~~~~  430 (459)
T PRK06698        402 EAAVVGDRLSDINAAKDNGLIAIGCNFDF  430 (459)
T ss_pred             eEEEEeCCHHHHHHHHHCCCeEEEEeCCC
Confidence            99999999999999999999999997754

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.55  E-value=1e-14  Score=146.96  Aligned_cols=108  Identities=19%  Similarity=0.238  Sum_probs=93.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc-ccccccceecCCC-------hhHHHHHHHHhCCCCcc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN-QYFDHKQIFPGQK-------TTHFANLKKATGIEYKD   83 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~-~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~~   83 (280)
                      .++||+.++|++|+++|++++|+||+.. ..++..++.+++. .|||  .++++++       +..|+.+++++|++|++
T Consensus       161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~-~~~~~~L~~~gl~~~~Fd--~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e  237 (1057)
T PLN02919        161 IGFPGALELITQCKNKGLKVAVASSADR-IKVDANLAAAGLPLSMFD--AIVSADAFENLKPAPDIFLAAAKILGVPTSE  237 (1057)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHcCCChhHCC--EEEECcccccCCCCHHHHHHHHHHcCcCccc
Confidence            4799999999999999999999999999 8999999999996 7999  6766543       23499999999999999


Q ss_pred             EEEEeCCcccccccccCCCeEEEEcCCCchhhhhccccc
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSV  122 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~  122 (280)
                      |+||||+..|+++|+++||++|++.++....++......
T Consensus       238 ~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~  276 (1057)
T PLN02919        238 CVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPS  276 (1057)
T ss_pred             EEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCC
Confidence            999999999999999999999999887655554433333

>KOG3085|consensus

Probab=99.55  E-value=1.2e-14  Score=121.48  Aligned_cols=100  Identities=20%  Similarity=0.315  Sum_probs=86.7

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p   81 (280)
                      ...++.+++.++++.||++|+.++++||...  ..+..+..+++..|||  .++.|.+       ...|+.+++++|+.|
T Consensus       110 ~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~--r~~~~l~~~~l~~~fD--~vv~S~e~g~~KPDp~If~~al~~l~v~P  185 (237)
T KOG3085|consen  110 SAWKYLDGMQELLQKLRKKGTILGIISNFDD--RLRLLLLPLGLSAYFD--FVVESCEVGLEKPDPRIFQLALERLGVKP  185 (237)
T ss_pred             cCceeccHHHHHHHHHHhCCeEEEEecCCcH--HHHHHhhccCHHHhhh--hhhhhhhhccCCCChHHHHHHHHHhCCCh
Confidence            3567889999999999999999999999998  5679999999999999  5655533       334999999999999


Q ss_pred             ccEEEEeCCcc-cccccccCCCeEEEEcCCCc
Q psy8911          82 KDMVFFDDEER-NSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        82 ~~~l~v~D~~~-~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|++|||+.. |+++|+++||++++|-+..+
T Consensus       186 ee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~  217 (237)
T KOG3085|consen  186 EECVHIGDLLENDYEGARNLGWHAILVDNSIT  217 (237)
T ss_pred             HHeEEecCccccccHhHHHcCCEEEEEccccc
Confidence            99999999965 59999999999999965543

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.54  E-value=9.8e-15  Score=119.49  Aligned_cols=91  Identities=14%  Similarity=0.149  Sum_probs=75.6

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe---------------------c----C
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY---------------------P----G  217 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~---------------------~----~  217 (280)
                      .++++||+.++|+.|+++|++++|+||+ ....++..++++++.++|+.+...                     +    .
T Consensus        70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~  148 (188)
T TIGR01489        70 SAPIDPGFKEFIAFIKEHGIDFIVISDG-NDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC  148 (188)
T ss_pred             hCCCCccHHHHHHHHHHcCCcEEEEeCC-cHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence            4689999999999999999999999999 888999999999999999864321                     0    0


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceE
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC  257 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~  257 (280)
                      +|+..+..+.++.   |++++||||+.+|+.+|+++++-+
T Consensus       149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~  185 (188)
T TIGR01489       149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF  185 (188)
T ss_pred             CHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence            3556666666554   899999999999999999987643

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.54  E-value=4.6e-15  Score=124.88  Aligned_cols=96  Identities=11%  Similarity=0.070  Sum_probs=75.5

Q ss_pred             CceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--cc--ccceE-----ecCCCHHH---------
Q psy8911         161 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YF--SNKEI-----YPGPKTTH---------  222 (280)
Q Consensus       161 ~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~f--~~~~~-----~~~~k~~~---------  222 (280)
                      ...+.++||+.++|+.|+++|++++|+||+ ....++.+++++ +..  ++  +....     ...|.+..         
T Consensus        70 ~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~-~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~  147 (219)
T PRK09552         70 LETAEIREGFHEFVQFVKENNIPFYVVSGG-MDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGC  147 (219)
T ss_pred             HhCCCcCcCHHHHHHHHHHcCCeEEEECCC-cHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCC
Confidence            345789999999999999999999999999 888999999998 643  33  11101     11233321         


Q ss_pred             -HHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEE
Q psy8911         223 -FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  258 (280)
Q Consensus       223 -~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i  258 (280)
                       ...++++++.++++|+||||+.+|+.+|++||+.++
T Consensus       148 ~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a  184 (219)
T PRK09552        148 CKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA  184 (219)
T ss_pred             chHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence             357889999999999999999999999999999433

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.54  E-value=1.7e-14  Score=119.32  Aligned_cols=88  Identities=16%  Similarity=0.078  Sum_probs=78.5

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec----CCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP----GPKTTHFESLKKATGIEYKDMVFF  240 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~----~~k~~~~~~~~~~~~~~~~~~l~i  240 (280)
                      .+.+++.++|+.|+++|++++|+||+ ....++..++.+|+.+||+.+....    +|+++.|..+++++|++|++|+||
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~-~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v  184 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGR-PRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV  184 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCC-CHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence            34556799999999999999999999 8999999999999999999754332    477889999999999999999999


Q ss_pred             eCCcCCccccccc
Q psy8911         241 DDEERNSHDVSPL  253 (280)
Q Consensus       241 gD~~~di~~a~~a  253 (280)
                      ||+++|+++|+++
T Consensus       185 GD~~~Di~aA~~a  197 (197)
T TIGR01548       185 GDTVDDIITGRKA  197 (197)
T ss_pred             eCCHHHHHHHHhC
Confidence            9999999999875

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.52  E-value=1.6e-14  Score=114.08  Aligned_cols=95  Identities=13%  Similarity=0.061  Sum_probs=81.9

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc-cccccceecCCChh----HHHHHHHHhCCCCcc
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ-YFDHKQIFPGQKTT----HFANLKKATGIEYKD   83 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~-~fd~~~i~~~~~~~----~~~~~~~~~g~~p~~   83 (280)
                      ..+.++||+.++|++|+ ++++++|+||++. ..++.+++.+++.. +|+  .+++++++.    .|.++++++|++|++
T Consensus        42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~-~~~~~il~~l~~~~~~f~--~i~~~~d~~~~KP~~~k~l~~l~~~p~~  117 (148)
T smart00577       42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLR-MYADPVLDLLDPKKYFGY--RRLFRDECVFVKGKYVKDLSLLGRDLSN  117 (148)
T ss_pred             EEEEECCCHHHHHHHHH-hccEEEEEeCCcH-HHHHHHHHHhCcCCCEee--eEEECccccccCCeEeecHHHcCCChhc
Confidence            34688999999999999 5799999999999 99999999999865 458  677665432    299999999999999


Q ss_pred             EEEEeCCcccccccccCCCeEEEE
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v  107 (280)
                      |++|||++.++.+|+++|+.+--+
T Consensus       118 ~i~i~Ds~~~~~aa~~ngI~i~~f  141 (148)
T smart00577      118 VIIIDDSPDSWPFHPENLIPIKPW  141 (148)
T ss_pred             EEEEECCHHHhhcCccCEEEecCc
Confidence            999999999999999998876544

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.52  E-value=1e-13  Score=123.39  Aligned_cols=105  Identities=13%  Similarity=0.163  Sum_probs=85.1

Q ss_pred             cCCCcceecCCHHHHHHHHHHCCceEEEecCC---------------CchHHHHHHHhhcCcccccccccee-c------
Q psy8911           6 ARGAHIKYYPDVPGILKYLKQNNCLVAAASRT---------------SEIQGAQQLLDLFNWNQYFDHKQIF-P------   63 (280)
Q Consensus         6 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~---------------~~~~~~~~~l~~~~l~~~fd~~~i~-~------   63 (280)
                      .....+.+|||+.++|.+|+++|++++|+||+               +. .....+++.+++.  |+  .++ +      
T Consensus        24 ~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~-~~i~~iL~~~gl~--fd--~i~i~~~~~sd   98 (354)
T PRK05446         24 DSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPH-NLMMQIFESQGIK--FD--EVLICPHFPED   98 (354)
T ss_pred             cCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHH-HHHHHHHHHcCCc--ee--eEEEeCCcCcc
Confidence            44556899999999999999999999999996               23 4566778888883  66  332 2      


Q ss_pred             -----CCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcC-CCchhh
Q psy8911          64 -----GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVED-GMTNAI  115 (280)
Q Consensus        64 -----~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~-~~~~~~  115 (280)
                           .+++..|..+++.++++|++++||||+..|+++|+++||++|++.. +..|..
T Consensus        99 ~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~~~~~~  156 (354)
T PRK05446         99 NCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARETLNWDA  156 (354)
T ss_pred             cCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence                 1234459999999999999999999999999999999999999944 455544

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.51  E-value=2.1e-14  Score=119.36  Aligned_cols=95  Identities=14%  Similarity=0.049  Sum_probs=77.8

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce--------Eec-CCCHHHHHHHHHHcCC
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE--------IYP-GPKTTHFESLKKATGI  232 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~--------~~~-~~k~~~~~~~~~~~~~  232 (280)
                      ..+.++||+.++|+.|+++ ++++|+||+ ....++..++++|+..+|....        ++. .+++.....++++++.
T Consensus        65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~-~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~  142 (205)
T PRK13582         65 ATLDPLPGAVEFLDWLRER-FQVVILSDT-FYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS  142 (205)
T ss_pred             HhCCCCCCHHHHHHHHHhc-CCEEEEeCC-cHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence            4567899999999999999 999999999 8999999999999998886421        111 1334445666777777


Q ss_pred             CCCcEEEEeCCcCCcccccccCceEE
Q psy8911         233 EYKDMVFFDDEERNSHDVSPLGVTCI  258 (280)
Q Consensus       233 ~~~~~l~igD~~~di~~a~~aG~~~i  258 (280)
                      .+++|+||||+.+|+.+++++|+.+.
T Consensus       143 ~~~~~v~iGDs~~D~~~~~aa~~~v~  168 (205)
T PRK13582        143 LGYRVIAAGDSYNDTTMLGEADAGIL  168 (205)
T ss_pred             hCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence            88999999999999999999998553

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.51  E-value=3.4e-14  Score=112.81  Aligned_cols=90  Identities=20%  Similarity=0.277  Sum_probs=78.9

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC------ChhHHHHHHHHhCCC
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ------KTTHFANLKKATGIE   80 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~------~~~~~~~~~~~~g~~   80 (280)
                      +.....++||+.++|+.|+++|++++|+||++. ..++..++.+ +..+|+  .+++++      +...|+.+++++|++
T Consensus        59 ~~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~~-l~~~f~--~i~~~~~~~~Kp~~~~~~~~~~~~~~~  134 (154)
T TIGR01549        59 YDAEEAYIRGAADLLKRLKEAGIKLGIISNGSL-RAQKLLLRKH-LGDYFD--LILGSDEFGAKPEPEIFLAALESLGLP  134 (154)
T ss_pred             cchhheeccCHHHHHHHHHHCcCeEEEEeCCch-HHHHHHHHHH-HHhcCc--EEEecCCCCCCcCHHHHHHHHHHcCCC
Confidence            345667889999999999999999999999999 8899999988 889999  555443      234499999999999


Q ss_pred             CccEEEEeCCcccccccccCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLG  101 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G  101 (280)
                      | +|+||||+..|+++|+++|
T Consensus       135 ~-~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       135 P-EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             C-CEEEEeCCHHHHHHHHHcc
Confidence            9 9999999999999999987

HAD subfamilies caused by an overly broad single model.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.50  E-value=2.1e-14  Score=110.56  Aligned_cols=85  Identities=27%  Similarity=0.428  Sum_probs=74.6

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCC-CchHHHHHHHhhcC-------ccccccccceecC---CChhHHHHHHHHhC--
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRT-SEIQGAQQLLDLFN-------WNQYFDHKQIFPG---QKTTHFANLKKATG--   78 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~-~~~~~~~~~l~~~~-------l~~~fd~~~i~~~---~~~~~~~~~~~~~g--   78 (280)
                      ++|||+.++|+.|+++|++++|+||+ +. ..+...++.++       +.++|+  .++++   +++..|+.+++++|  
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~-~~~~~~l~~~~~~~~i~~l~~~f~--~~~~~~~~pkp~~~~~a~~~lg~~  105 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDP-HVAYELLKIFEDFGIIFPLAEYFD--PLTIGYWLPKSPRLVEIALKLNGV  105 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCH-HHHHHHHHhccccccchhhHhhhh--hhhhcCCCcHHHHHHHHHHHhcCC
Confidence            48999999999999999999999999 66 88888899988       899999  66655   33445999999999  


Q ss_pred             CCCccEEEEeCCccccccccc
Q psy8911          79 IEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      +.|++|+||||+..|+++.++
T Consensus       106 ~~p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681       106 LKPKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             CCcceEEEECCCHhHHHHHHh
Confidence            999999999999999877654

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>KOG3109|consensus

Probab=99.49  E-value=1.6e-13  Score=111.23  Aligned_cols=95  Identities=25%  Similarity=0.387  Sum_probs=85.6

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----------CCCHHHHHHHHHHcCC
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----------GPKTTHFESLKKATGI  232 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----------~~k~~~~~~~~~~~~~  232 (280)
                      +++=+-.+++|-.|+.++  ..+.||+ .+.++.++|+.+||.++|+.+++..           +|.++.|+.+++..|+
T Consensus        99 LkPD~~LRnlLL~l~~r~--k~~FTNa-~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi  175 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKKRR--KWIFTNA-YKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGI  175 (244)
T ss_pred             cCCCHHHHHHHHhCcccc--EEEecCC-cHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCC
Confidence            677778899999998885  8899999 9999999999999999999875543           2566889999999999


Q ss_pred             C-CCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         233 E-YKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       233 ~-~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      + |.+++||+||.++|++|++.|+.+++|.
T Consensus       176 ~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~  205 (244)
T KOG3109|consen  176 DSPRNTYFFDDSERNIQTAKEVGLKTVLVG  205 (244)
T ss_pred             CCcCceEEEcCchhhHHHHHhccceeEEEE
Confidence            8 9999999999999999999999999996

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.48  E-value=6.3e-14  Score=115.99  Aligned_cols=86  Identities=14%  Similarity=0.088  Sum_probs=76.1

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC------hhHHHHHHHHhCCCCccEE
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK------TTHFANLKKATGIEYKDMV   85 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~------~~~~~~~~~~~g~~p~~~l   85 (280)
                      ++.+++.++|+.|+++|++++|+||++. ..++..++.+|+.++|+  .++++++      +..|..+++++|++|++|+
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~--~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i  182 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGRPR-KDAAKFLTTHGLEILFP--VQIWMEDCPPKPNPEPLILAAKALGVEACHAA  182 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCCCH-HHHHHHHHHcCchhhCC--EEEeecCCCCCcCHHHHHHHHHHhCcCcccEE
Confidence            4556679999999999999999999999 89999999999999999  6665432      3349999999999999999


Q ss_pred             EEeCCcccccccccC
Q psy8911          86 FFDDEERNSHDVSPL  100 (280)
Q Consensus        86 ~v~D~~~~i~aa~~~  100 (280)
                      ||||+.+|+++|+++
T Consensus       183 ~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       183 MVGDTVDDIITGRKA  197 (197)
T ss_pred             EEeCCHHHHHHHHhC
Confidence            999999999999875

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>KOG3085|consensus

Probab=99.48  E-value=9.6e-14  Score=115.99  Aligned_cols=101  Identities=21%  Similarity=0.303  Sum_probs=88.3

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .....+++.++++.|+++|+.++++||. .. ..+..+..+|+..|||.+..+     .+|+|.+|+.+++++++.|++|
T Consensus       111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~-d~-r~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~  188 (237)
T KOG3085|consen  111 AWKYLDGMQELLQKLRKKGTILGIISNF-DD-RLRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC  188 (237)
T ss_pred             CceeccHHHHHHHHHHhCCeEEEEecCC-cH-HHHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence            5677889999999999999999999999 43 345889999999999976432     3588899999999999999999


Q ss_pred             EEEeCCcCC-cccccccCceEEEECCCCC
Q psy8911         238 VFFDDEERN-SHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       238 l~igD~~~d-i~~a~~aG~~~i~v~~g~~  265 (280)
                      ++|||+..+ +++|+++||++++|-+..+
T Consensus       189 vhIgD~l~nD~~gA~~~G~~ailv~~~~~  217 (237)
T KOG3085|consen  189 VHIGDLLENDYEGARNLGWHAILVDNSIT  217 (237)
T ss_pred             EEecCccccccHhHHHcCCEEEEEccccc
Confidence            999999985 9999999999999986544

>KOG2914|consensus

Probab=99.47  E-value=6.3e-14  Score=116.60  Aligned_cols=101  Identities=14%  Similarity=0.177  Sum_probs=88.1

Q ss_pred             cCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcC-ccccccccceec--C-------CChhHHHHHHH
Q psy8911           6 ARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFN-WNQYFDHKQIFP--G-------QKTTHFANLKK   75 (280)
Q Consensus         6 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~-l~~~fd~~~i~~--~-------~~~~~~~~~~~   75 (280)
                      +.-....+.||+..+++.|+.+|++++++|+++. ...+..++.++ +...|+  .++.  +       ++++.|..+++
T Consensus        86 ~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~-~~~~~k~~~~~~~~~~f~--~~v~~d~~~v~~gKP~Pdi~l~A~~  162 (222)
T KOG2914|consen   86 RLFMNSILMPGAEKLVNHLKNNGIPVALATSSTS-ASFELKISRHEDIFKNFS--HVVLGDDPEVKNGKPDPDIYLKAAK  162 (222)
T ss_pred             HhccccccCCcHHHHHHHHHhCCCCeeEEecCCc-ccHHHHHHHhhHHHHhcC--CCeecCCccccCCCCCchHHHHHHH
Confidence            4455678999999999999999999999999999 88888888887 888888  3333  2       23344999999


Q ss_pred             HhCCCC-ccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          76 ATGIEY-KDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        76 ~~g~~p-~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      ++|.+| +.|++|+|++.++++|+++||++|++++
T Consensus       163 ~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  163 RLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             hcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence            999999 9999999999999999999999999987

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.47  E-value=1.3e-12  Score=111.84  Aligned_cols=199  Identities=17%  Similarity=0.173  Sum_probs=132.3

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHH---HHHhh-cCccccccccceecCCChhHHHHHHHHhCCCCccEEE
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQ---QLLDL-FNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVF   86 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~---~~l~~-~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~   86 (280)
                      -+++||+.++|+.|+++|+++.++||++. ...+   ..|+. .++..-.+  .|+.|....  ...+++. .++..|.+
T Consensus        23 ~~~ipga~e~l~~L~~~g~~~iflTNn~~-~s~~~~~~~L~~~~~~~~~~~--~i~TS~~at--~~~l~~~-~~~~kv~v   96 (269)
T COG0647          23 NEAIPGAAEALKRLKAAGKPVIFLTNNST-RSREVVAARLSSLGGVDVTPD--DIVTSGDAT--ADYLAKQ-KPGKKVYV   96 (269)
T ss_pred             CccCchHHHHHHHHHHcCCeEEEEeCCCC-CCHHHHHHHHHhhcCCCCCHH--HeecHHHHH--HHHHHhh-CCCCEEEE
Confidence            57899999999999999999999999988 4444   33444 45555666  677665542  2222222 23388999


Q ss_pred             EeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceecc
Q psy8911          87 FDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKY  166 (280)
Q Consensus        87 v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (280)
                      ||. ....+....+|+..+.-....             .+.++..-+|.++.                            
T Consensus        97 iG~-~~l~~~l~~~G~~~~~~~~~~-------------~~d~Vv~g~d~~~~----------------------------  134 (269)
T COG0647          97 IGE-EGLKEELEGAGFELVDEEEPA-------------RVDAVVVGLDRTLT----------------------------  134 (269)
T ss_pred             ECC-cchHHHHHhCCcEEeccCCCC-------------cccEEEEecCCCCC----------------------------
Confidence            994 555688888998877431110             03455555554442                            


Q ss_pred             CCCHHHHHHHHhhCCcEEEEEcCCCcHHH------------HHHHHhhC-CCccccccceEecCCCHHHHHHHHHHcCCC
Q psy8911         167 YRGVPEILRYLKENKCLVAAASRTSEILH------------AKQILNLI-NLNQYFSNKEIYPGPKTTHFESLKKATGIE  233 (280)
Q Consensus       167 ~~g~~~~L~~L~~~g~~~~i~T~~~~~~~------------~~~~l~~~-gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~  233 (280)
                      |....+.+..+++.  ...|+||. ....            ....++.+ |-..     .+..+|.+.+|+.++++++.+
T Consensus       135 ~e~l~~a~~~i~~g--~~fI~tNp-D~~~p~~~g~~pgaGai~~~~~~~tg~~~-----~~~GKP~~~i~~~al~~~~~~  206 (269)
T COG0647         135 YEKLAEALLAIAAG--APFIATNP-DLTVPTERGLRPGAGAIAALLEQATGREP-----TVIGKPSPAIYEAALEKLGLD  206 (269)
T ss_pred             HHHHHHHHHHHHcC--CcEEEeCC-CccccCCCCCccCcHHHHHHHHHhhCCcc-----cccCCCCHHHHHHHHHHhCCC
Confidence            11233344444433  56677776 3211            11112211 1122     134578899999999999999


Q ss_pred             CCcEEEEeCCcC-CcccccccCceEEEECCCCC
Q psy8911         234 YKDMVFFDDEER-NSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       234 ~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~~  265 (280)
                      +++++||||+.. ||..|+++||.+++|..|.+
T Consensus       207 ~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~  239 (269)
T COG0647         207 RSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVS  239 (269)
T ss_pred             cccEEEEcCCchhhHHHHHHcCCCEEEEccCCC
Confidence            999999999988 99999999999999999986

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.47  E-value=1e-13  Score=111.52  Aligned_cols=90  Identities=16%  Similarity=0.252  Sum_probs=74.5

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCch-----------HHHHHHHhhcCccccccccceecC-------CChhHHHHHH
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEI-----------QGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLK   74 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-----------~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~   74 (280)
                      +|||+.++|+.|+++|++++|+||++..           ..++.+++.+|+..  +  .++++       ++.+.|+.++
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~--~ii~~~~~~~~KP~p~~~~~~~  118 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--Q--VLAATHAGLYRKPMTGMWEYLQ  118 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--E--EEEecCCCCCCCCccHHHHHHH
Confidence            6999999999999999999999999861           14678899999843  3  23222       2234599999


Q ss_pred             HHhC--CCCccEEEEeCCc--------ccccccccCCCeEEE
Q psy8911          75 KATG--IEYKDMVFFDDEE--------RNSHDVSPLGVTCIL  106 (280)
Q Consensus        75 ~~~g--~~p~~~l~v~D~~--------~~i~aa~~~G~~~i~  106 (280)
                      +++|  ++|++|+||||+.        .|+++|+++|+.+++
T Consensus       119 ~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664       119 SQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             HHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence            9999  9999999999996        599999999999874

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.46  E-value=1e-13  Score=116.45  Aligned_cols=99  Identities=16%  Similarity=0.169  Sum_probs=84.0

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc-----e----ec------CCChhHHH
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ-----I----FP------GQKTTHFA   71 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~-----i----~~------~~~~~~~~   71 (280)
                      ....++++||+.++|+.|+++|++++|+||+.. ..++.+++.+++..+|+...     +    ..      .++...|+
T Consensus        80 ~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~  158 (219)
T TIGR00338        80 VRENLPLTEGAEELVKTLKEKGYKVAVISGGFD-LFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLL  158 (219)
T ss_pred             HHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHH
Confidence            334578999999999999999999999999999 89999999999999886211     1    11      12455699


Q ss_pred             HHHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          72 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        72 ~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      .++++++++|++|+||||+.+|+.+|+++|+..++
T Consensus       159 ~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~  193 (219)
T TIGR00338       159 ILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF  193 (219)
T ss_pred             HHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe
Confidence            99999999999999999999999999999998643

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.46  E-value=6e-13  Score=113.69  Aligned_cols=127  Identities=10%  Similarity=-0.043  Sum_probs=96.3

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHH--HHHhhC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAK--QILNLI  203 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~--~~l~~~  203 (280)
                      .+.+.||+|||||+                       ...++||+.++|+.|+++|++++++||+ .+....  ..|+++
T Consensus         8 ~~~~~~D~dG~l~~-----------------------~~~~~pga~e~L~~L~~~G~~~~ivTN~-~~~~~~~~~~L~~~   63 (242)
T TIGR01459         8 YDVFLLDLWGVIID-----------------------GNHTYPGAVQNLNKIIAQGKPVYFVSNS-PRNIFSLHKTLKSL   63 (242)
T ss_pred             CCEEEEeccccccc-----------------------CCccCccHHHHHHHHHHCCCEEEEEeCC-CCChHHHHHHHHHC
Confidence            46889999999985                       2458999999999999999999999999 666655  789999


Q ss_pred             CCcc-ccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCc---------eEEEECCC----CCHHHH
Q psy8911         204 NLNQ-YFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGV---------TCIHVKKG----MSHAVL  269 (280)
Q Consensus       204 gl~~-~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~---------~~i~v~~g----~~~~~~  269 (280)
                      |+.. +|+.+.....-....+..++++++++|+++++|||+..|++....+|.         .++.+...    ++.+.+
T Consensus        64 gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~  143 (242)
T TIGR01459        64 GINADLPEMIISSGEIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYTTDDENKANASLITIYRSENEKLDLDEF  143 (242)
T ss_pred             CCCccccceEEccHHHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCccccCCcccCcEEEEcCCCcccCCHHHH
Confidence            9997 898754432222356777778889999999999999998876655443         23444432    556666


Q ss_pred             HHHHHHH
Q psy8911         270 QKGLKQW  276 (280)
Q Consensus       270 ~~~~~~~  276 (280)
                      +..+...
T Consensus       144 ~~~l~~l  150 (242)
T TIGR01459       144 DELFAPI  150 (242)
T ss_pred             HHHHHHH
Confidence            6666543

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PHA02597 30

Probab=99.45  E-value=1.3e-13  Score=114.08  Aligned_cols=99  Identities=20%  Similarity=0.246  Sum_probs=80.6

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc--ceecC----CChhHHHHHHHHhCCCCc
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK--QIFPG----QKTTHFANLKKATGIEYK   82 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~--~i~~~----~~~~~~~~~~~~~g~~p~   82 (280)
                      ..+.+|||+.++|+.|+++ ++++++||++. ......++.+++.++|+..  .++++    .++..|+.+++++|  |+
T Consensus        71 ~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~-~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~  146 (197)
T PHA02597         71 RYLSAYDDALDVINKLKED-YDFVAVTALGD-SIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DR  146 (197)
T ss_pred             HhccCCCCHHHHHHHHHhc-CCEEEEeCCcc-chhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CC
Confidence            4577999999999999997 57888999887 6666677888887655310  34332    24455999999999  89


Q ss_pred             cEEEEeCCcccccccccC--CCeEEEEcCCC
Q psy8911          83 DMVFFDDEERNSHDVSPL--GVTCILVEDGM  111 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~--G~~~i~v~~~~  111 (280)
                      +|+||||+..|+++|+++  |+++|++.++.
T Consensus       147 ~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~  177 (197)
T PHA02597        147 VVCFVDDLAHNLDAAHEALSQLPVIHMLRGE  177 (197)
T ss_pred             cEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence            999999999999999999  99999997764

2 hypothetical protein; Provisional

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.43  E-value=7.2e-12  Score=107.46  Aligned_cols=198  Identities=12%  Similarity=0.150  Sum_probs=124.6

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCC---chHHHHHHHhhcCccccccccceecCCChh-HHHHHHHHhCCCCccEEEE
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTS---EIQGAQQLLDLFNWNQYFDHKQIFPGQKTT-HFANLKKATGIEYKDMVFF   87 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~---~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~-~~~~~~~~~g~~p~~~l~v   87 (280)
                      .++|++.++|+.|+++|++++++||++   . ......++.+|+....+  .|+++...- .|..   +.+ ....+.++
T Consensus        17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~-~~~~~~l~~~g~~~~~~--~iit~~~~~~~~l~---~~~-~~~~v~~l   89 (249)
T TIGR01457        17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTP-ESVAEMLASFDIPATLE--TVFTASMATADYMN---DLK-LEKTVYVI   89 (249)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCH-HHHHHHHHHcCCCCChh--hEeeHHHHHHHHHH---hcC-CCCEEEEE
Confidence            468899999999999999999999843   4 55666788888876666  676664332 2332   221 23457777


Q ss_pred             eCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC
Q psy8911          88 DDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY  167 (280)
Q Consensus        88 ~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (280)
                      |.. .-.+.....|....    .             .-+..++...|                            ....|
T Consensus        90 g~~-~l~~~l~~~g~~~~----~-------------~~~~~Vvvg~~----------------------------~~~~y  123 (249)
T TIGR01457        90 GEE-GLKEAIKEAGYVED----K-------------EKPDYVVVGLD----------------------------RQIDY  123 (249)
T ss_pred             cCh-hHHHHHHHcCCEec----C-------------CCCCEEEEeCC----------------------------CCCCH
Confidence            663 12333344554311    0             00122222222                            11244


Q ss_pred             CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHH--HH-hhCCCccccccc-----eEecCCCHHHHHHHHHHcCCCCCcEEE
Q psy8911         168 RGVPEILRYLKENKCLVAAASRTSEILHAKQ--IL-NLINLNQYFSNK-----EIYPGPKTTHFESLKKATGIEYKDMVF  239 (280)
Q Consensus       168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~--~l-~~~gl~~~f~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~l~  239 (280)
                      +.....+..|+ +|.+ .|+||. .......  .+ ..-.+...+...     ....+|++..|..++++++++|++++|
T Consensus       124 ~~l~~a~~~l~-~g~~-~i~tN~-D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~  200 (249)
T TIGR01457       124 EKFATATLAIR-KGAH-FIGTNG-DLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLM  200 (249)
T ss_pred             HHHHHHHHHHH-CCCe-EEEECC-CCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEE
Confidence            55566666664 5777 888998 4332210  00 000111222211     123468889999999999999999999


Q ss_pred             EeCCc-CCcccccccCceEEEECCCCC
Q psy8911         240 FDDEE-RNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       240 igD~~-~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |||+. .||..|+++|+++++|.+|..
T Consensus       201 VGD~~~~Di~~a~~~G~~~v~v~~G~~  227 (249)
T TIGR01457       201 VGDNYLTDIRAGIDAGIDTLLVHTGVT  227 (249)
T ss_pred             ECCCchhhHHHHHHcCCcEEEEcCCCC
Confidence            99997 799999999999999998874

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.43  E-value=3.6e-13  Score=111.45  Aligned_cols=101  Identities=15%  Similarity=0.181  Sum_probs=84.6

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceec------C---------CChhHHHHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFP------G---------QKTTHFANL   73 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~------~---------~~~~~~~~~   73 (280)
                      .+++++||+.++|+.|+++|++++|+||+.. ..++.+++.+|+..+|+......      +         .+...+..+
T Consensus        77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~  155 (201)
T TIGR01491        77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIM-CLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL  155 (201)
T ss_pred             HhCCCCccHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence            4578999999999999999999999999999 89999999999988886322111      0         111348888


Q ss_pred             HHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          74 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        74 ~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++++|++|++|+||||+.+|+.+|+++|+..+..+++
T Consensus       156 ~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~  192 (201)
T TIGR01491       156 KRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG  192 (201)
T ss_pred             HHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence            8999999999999999999999999999988776554

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.42  E-value=3e-13  Score=119.13  Aligned_cols=98  Identities=15%  Similarity=0.215  Sum_probs=86.2

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc-cccccceecCC------------C--hhHHHHHH
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ-YFDHKQIFPGQ------------K--TTHFANLK   74 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~-~fd~~~i~~~~------------~--~~~~~~~~   74 (280)
                      ...++||+.++|+.|+++|++++++||++. ...+..++.+++.+ +|+  .+++.+            +  ...+..++
T Consensus       185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~-~~~~~~l~~l~~~~~~f~--~i~~~~~~~~~~~~~~~~kp~p~~~~~~l  261 (300)
T PHA02530        185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDG-VCEEDTVEWLRQTDIWFD--DLIGRPPDMHFQREQGDKRPDDVVKEEIF  261 (300)
T ss_pred             cCCCChhHHHHHHHHHhCCCEEEEEeCCCh-hhHHHHHHHHHHcCCchh--hhhCCcchhhhcccCCCCCCcHHHHHHHH
Confidence            357899999999999999999999999999 89999999999997 999  454443            1  22388999


Q ss_pred             HHhCC-CCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          75 KATGI-EYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        75 ~~~g~-~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++++. +|++|++|||+..|+++|+++|+.+++|.+|
T Consensus       262 ~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g  298 (300)
T PHA02530        262 WEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG  298 (300)
T ss_pred             HHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence            99988 6899999999999999999999999999765

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.38  E-value=1.3e-12  Score=121.74  Aligned_cols=116  Identities=16%  Similarity=0.178  Sum_probs=89.0

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceec-cCCCHHHHHHHHhhCCcEEEEEcCCCcH-----------
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSEI-----------  193 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~L~~L~~~g~~~~i~T~~~~~-----------  193 (280)
                      .+...||+||||+......           .+-.....++ +|||+.+.|+.|+++||+++|+||. ..           
T Consensus       168 ~Kia~fD~DGTLi~t~sg~-----------~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ-~gI~~G~~~~~~~  235 (526)
T TIGR01663       168 EKIAGFDLDGTIIKTKSGK-----------VFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQ-GGIARGKINADDF  235 (526)
T ss_pred             CcEEEEECCCCccccCCCc-----------cCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECC-cccccCcccHHHH
Confidence            4688999999998532110           0001122344 6999999999999999999999998 44           


Q ss_pred             -HHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcC----CCCCcEEEEeCCcCCcccccccCc
Q psy8911         194 -LHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATG----IEYKDMVFFDDEERNSHDVSPLGV  255 (280)
Q Consensus       194 -~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~----~~~~~~l~igD~~~di~~a~~aG~  255 (280)
                       ..+..+++++|+.  |+.+...     .+|++.++..++++++    +++++++||||+..|+++++++|-
T Consensus       236 ~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~  305 (526)
T TIGR01663       236 KAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK  305 (526)
T ss_pred             HHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence             3578889999985  6643321     2477899999999985    899999999999999998887775

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.38  E-value=2.3e-13  Score=110.31  Aligned_cols=83  Identities=13%  Similarity=0.119  Sum_probs=73.6

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+       +++|+||+ ....++..++++|+.+||+.+.+.     .+|+|+.|+.+++++|++|++|
T Consensus        88 ~~~~~~g~~~~L~-------~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~  159 (175)
T TIGR01493        88 NLPPWPDSAAALA-------RVAILSNA-SHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV  159 (175)
T ss_pred             cCCCCCchHHHHH-------HHhhhhCC-CHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe
Confidence            4679999999998       38999999 899999999999999999975332     2477899999999999999999


Q ss_pred             EEEeCCcCCccccccc
Q psy8911         238 VFFDDEERNSHDVSPL  253 (280)
Q Consensus       238 l~igD~~~di~~a~~a  253 (280)
                      +||||+.+|+++|+++
T Consensus       160 l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       160 LMVAAHQWDLIGARKF  175 (175)
T ss_pred             EeEecChhhHHHHhcC
Confidence            9999999999999874

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.38  E-value=1.7e-13  Score=111.12  Aligned_cols=81  Identities=16%  Similarity=0.228  Sum_probs=71.4

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~   82 (280)
                      .+.++||+.++|+       +++|+||++. ..++..++++++.++||  .++++++       +..|+.+++++|++|+
T Consensus        88 ~~~~~~g~~~~L~-------~~~i~Tn~~~-~~~~~~l~~~~l~~~fd--~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~  157 (175)
T TIGR01493        88 NLPPWPDSAAALA-------RVAILSNASH-WAFDQFAQQAGLPWYFD--RAFSVDTVRAYKPDPVVYELVFDTVGLPPD  157 (175)
T ss_pred             cCCCCCchHHHHH-------HHhhhhCCCH-HHHHHHHHHCCCHHHHh--hhccHhhcCCCCCCHHHHHHHHHHHCCCHH
Confidence            5679999999998       4899999999 89999999999999999  5665533       2339999999999999


Q ss_pred             cEEEEeCCcccccccccC
Q psy8911          83 DMVFFDDEERNSHDVSPL  100 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~  100 (280)
                      +|+||||+.+|+.+|+++
T Consensus       158 ~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       158 RVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             HeEeEecChhhHHHHhcC
Confidence            999999999999999874

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.38  E-value=1.5e-12  Score=100.11  Aligned_cols=96  Identities=21%  Similarity=0.357  Sum_probs=84.6

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-----------------------C
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-----------------------Q   65 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-----------------------~   65 (280)
                      ...+++|++.++|+.|+++|++++|+||++. ..++..++.+++..+|+  .++++                       +
T Consensus        21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~-~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (139)
T cd01427          21 EELELYPGVKEALKELKEKGIKLALATNKSR-REVLELLEELGLDDYFD--PVITSNGAAIYYPKEGLFLGGGPFDIGKP   97 (139)
T ss_pred             ccCCcCcCHHHHHHHHHHCCCeEEEEeCchH-HHHHHHHHHcCCchhhh--heeccchhhhhcccccccccccccccCCC
Confidence            3468999999999999999999999999999 89999999999988888  44432                       2


Q ss_pred             ChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEE
Q psy8911          66 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        66 ~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v  107 (280)
                      +...+..+++.++..++++++|||+..|+++|+++|++++++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427          98 NPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             CHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            334489999999999999999999999999999999999874

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=99.37  E-value=2.6e-12  Score=109.35  Aligned_cols=209  Identities=12%  Similarity=0.062  Sum_probs=121.6

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCc--hHHHHHHHhh-cCccccccccceecCCChhH-HHHHHHHhCCCCccEEEE
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSE--IQGAQQLLDL-FNWNQYFDHKQIFPGQKTTH-FANLKKATGIEYKDMVFF   87 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--~~~~~~~l~~-~~l~~~fd~~~i~~~~~~~~-~~~~~~~~g~~p~~~l~v   87 (280)
                      .++|++.+.|+.|+++|+++.++||++.  +......+.. +++.--.+  .++.+..... |..  ++.  +...++++
T Consensus        14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~--~iits~~~~~~~l~--~~~--~~~~v~v~   87 (236)
T TIGR01460        14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPD--QIITSGSVTKDLLR--QRF--EGEKVYVI   87 (236)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHH--HeeeHHHHHHHHHH--HhC--CCCEEEEE
Confidence            5699999999999999999999998873  1222223444 67654455  6766654432 332  221  23457778


Q ss_pred             eCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC
Q psy8911          88 DDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY  167 (280)
Q Consensus        88 ~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (280)
                      |.. .-.+..+..|...-+..... ..      ..-..+..++++.|.++.                            |
T Consensus        88 G~~-~~~~~l~~~g~~~~~~~~~~-~~------~~~~~~~~vv~~~~~~~~----------------------------~  131 (236)
T TIGR01460        88 GVG-ELRESLEGLGFRNDFFDDID-HL------AIEKIPAAVIVGEPSDFS----------------------------Y  131 (236)
T ss_pred             CCH-HHHHHHHHcCCcCcccCccc-cc------ccCCCCeEEEECCCCCcC----------------------------H
Confidence            753 23445556665420011000 00      000112344555443321                            1


Q ss_pred             CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc--------eEecCCCHHHHHHHHHHcCCCCCcE-E
Q psy8911         168 RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK--------EIYPGPKTTHFESLKKATGIEYKDM-V  238 (280)
Q Consensus       168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~--------~~~~~~k~~~~~~~~~~~~~~~~~~-l  238 (280)
                      .....+...++ +|-...++||.+.......-....+...+|+.+        ....+|++..|+.++++++++++++ +
T Consensus       132 ~~~~~a~~~l~-~~~~~~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  210 (236)
T TIGR01460       132 DELAKAAYLLA-EGDVPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDV  210 (236)
T ss_pred             HHHHHHHHHHh-CCCCeEEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceE
Confidence            11122222333 442466778862111111112334455554421        1244688999999999999999998 9


Q ss_pred             EEeCCc-CCcccccccCceEEEECCC
Q psy8911         239 FFDDEE-RNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       239 ~igD~~-~di~~a~~aG~~~i~v~~g  263 (280)
                      ||||+. .||.+|+++|+++++|.+|
T Consensus       211 ~IGD~~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       211 MVGDNLRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             EECCCcHHHHHHHHHCCCcEEEEecC
Confidence            999999 7999999999999999875

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>KOG3109|consensus

Probab=99.37  E-value=1.1e-12  Score=106.37  Aligned_cols=96  Identities=23%  Similarity=0.343  Sum_probs=84.8

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc-----------ceecCCChhHHHHHHHHhCC
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK-----------QIFPGQKTTHFANLKKATGI   79 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~-----------~i~~~~~~~~~~~~~~~~g~   79 (280)
                      ++|-+-.+.+|-.|++++  .++.||++. .++.++|+++|+.++|+.+           .++|.+.+..|..+++..|+
T Consensus        99 LkPD~~LRnlLL~l~~r~--k~~FTNa~k-~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi  175 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKKRR--KWIFTNAYK-VHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGI  175 (244)
T ss_pred             cCCCHHHHHHHHhCcccc--EEEecCCcH-HHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCC
Confidence            778888999999999876  899999999 9999999999999999932           23334455669999999999


Q ss_pred             C-CccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          80 E-YKDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        80 ~-p~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      + |.+|+|||||..||++|++.||+++++..
T Consensus       176 ~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~  206 (244)
T KOG3109|consen  176 DSPRNTYFFDDSERNIQTAKEVGLKTVLVGR  206 (244)
T ss_pred             CCcCceEEEcCchhhHHHHHhccceeEEEEe
Confidence            8 99999999999999999999999999854

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.37  E-value=4.2e-13  Score=108.80  Aligned_cols=91  Identities=14%  Similarity=0.160  Sum_probs=75.5

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce--------Ee---------cCCCHHHHH
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE--------IY---------PGPKTTHFE  224 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~--------~~---------~~~k~~~~~  224 (280)
                      ..+.++||+.++|+.++++|++++|+|++ ....++..++++|+..+|....        .+         ...|...+.
T Consensus        70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~-~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~  148 (177)
T TIGR01488        70 RQVALRPGARELISWLKERGIDTVIVSGG-FDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK  148 (177)
T ss_pred             hcCCcCcCHHHHHHHHHHCCCEEEEECCC-cHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence            45678999999999999999999999999 8899999999999998775321        11         013446688


Q ss_pred             HHHHHcCCCCCcEEEEeCCcCCccccccc
Q psy8911         225 SLKKATGIEYKDMVFFDDEERNSHDVSPL  253 (280)
Q Consensus       225 ~~~~~~~~~~~~~l~igD~~~di~~a~~a  253 (280)
                      .++++.+++++++++|||+.+|+.+++.+
T Consensus       149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       149 ELLEESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence            88899999999999999999999888754

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.37  E-value=1.2e-12  Score=110.78  Aligned_cols=97  Identities=11%  Similarity=0.121  Sum_probs=81.2

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCC----CchHHHHHHHhhcCccccccccceecCCCh-----hHHHHHHHHh
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRT----SEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-----THFANLKKAT   77 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~----~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-----~~~~~~~~~~   77 (280)
                      ......+++++.++|++|+++|++++++||+    .. ..++.+++.+|+.++|+  .+++++..     ... .+++++
T Consensus       109 ~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~-~~a~~ll~~lGi~~~f~--~i~~~d~~~~~Kp~~~-~~l~~~  184 (237)
T TIGR01672       109 WDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTD-TVSKTLAKNFHIPAMNP--VIFAGDKPGQYQYTKT-QWIQDK  184 (237)
T ss_pred             cccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCH-HHHHHHHHHhCCchhee--EEECCCCCCCCCCCHH-HHHHhC
Confidence            3455678888999999999999999999998    65 68889999999999999  77776442     234 456677


Q ss_pred             CCCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          78 GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        78 g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |+    ++||||+.+|+.+|+++|+++|.+.++.
T Consensus       185 ~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~  214 (237)
T TIGR01672       185 NI----RIHYGDSDNDITAAKEAGARGIRILRAS  214 (237)
T ss_pred             CC----eEEEeCCHHHHHHHHHCCCCEEEEEecC
Confidence            76    8999999999999999999999997664

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.36  E-value=6.1e-13  Score=111.58  Aligned_cols=92  Identities=11%  Similarity=0.054  Sum_probs=73.8

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc--ceE------ecCCCHHHH----------H
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN--KEI------YPGPKTTHF----------E  224 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~--~~~------~~~~k~~~~----------~  224 (280)
                      .+.++||+.++|+.|+++|++++|+|++ ....++.++++++..++|..  ..+      ...|.+..+          .
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~-~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~  146 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGG-MDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP  146 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCC-cHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence            5789999999999999999999999999 88899999998865555421  111      112444333          4


Q ss_pred             HHHHHcCCCCCcEEEEeCCcCCcccccccCc
Q psy8911         225 SLKKATGIEYKDMVFFDDEERNSHDVSPLGV  255 (280)
Q Consensus       225 ~~~~~~~~~~~~~l~igD~~~di~~a~~aG~  255 (280)
                      .++++++..+++++||||+.+|+.+|++||+
T Consensus       147 ~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       147 SLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             HHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence            6778888899999999999999999999998

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK10444 UMP phosphatase; Provisional

Probab=99.35  E-value=2.7e-11  Score=103.67  Aligned_cols=194  Identities=12%  Similarity=0.054  Sum_probs=116.2

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh---cCccccccccceecCCChh-HHHHHHHHhCCCCccEEEE
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL---FNWNQYFDHKQIFPGQKTT-HFANLKKATGIEYKDMVFF   87 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~---~~l~~~fd~~~i~~~~~~~-~~~~~~~~~g~~p~~~l~v   87 (280)
                      .++||+.++|+.|+++|+++.++||.+. ...+.+.++   +|+.---+  .++++.... .|..   +.  ....+.++
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~-~~~~~~~~~l~~~G~~~~~~--~i~ts~~~~~~~L~---~~--~~~~v~~~   88 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPS-QTGQDLANRFATAGVDVPDS--VFYTSAMATADFLR---RQ--EGKKAYVI   88 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCC-CCHHHHHHHHHHcCCCCCHh--hEecHHHHHHHHHH---hC--CCCEEEEE
Confidence            6799999999999999999999999988 555554444   56532233  565544332 1332   21  23457777


Q ss_pred             eCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC
Q psy8911          88 DDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY  167 (280)
Q Consensus        88 ~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (280)
                      |.. .=.+.....|....   +.              -+..++...|.++                            -|
T Consensus        89 g~~-~l~~~l~~~g~~~~---~~--------------~~~~Vvvg~~~~~----------------------------~~  122 (248)
T PRK10444         89 GEG-ALIHELYKAGFTIT---DI--------------NPDFVIVGETRSY----------------------------NW  122 (248)
T ss_pred             cCH-HHHHHHHHCcCEec---CC--------------CCCEEEEeCCCCC----------------------------CH
Confidence            762 11222234454421   00              0123333333221                            11


Q ss_pred             CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc-------ccccc-----ceEecCCCHHHHHHHHHHcCCCCC
Q psy8911         168 RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-------QYFSN-----KEIYPGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~-------~~f~~-----~~~~~~~k~~~~~~~~~~~~~~~~  235 (280)
                      .........++ +|. ..|+||. ...       .-|+.       ..++.     .....+|+++.|..++++++++|+
T Consensus       123 ~~l~~a~~~l~-~g~-~~i~~n~-D~~-------~~g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~  192 (248)
T PRK10444        123 DMMHKAAYFVA-NGA-RFIATNP-DTH-------GRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSE  192 (248)
T ss_pred             HHHHHHHHHHH-CCC-EEEEECC-CCC-------CCCCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcc
Confidence            12222233333 454 4778886 331       01111       01111     112346889999999999999999


Q ss_pred             cEEEEeCCc-CCcccccccCceEEEECCCCC-HHHH
Q psy8911         236 DMVFFDDEE-RNSHDVSPLGVTCIHVKKGMS-HAVL  269 (280)
Q Consensus       236 ~~l~igD~~-~di~~a~~aG~~~i~v~~g~~-~~~~  269 (280)
                      +|+||||+. .|+.+|+++|+++++|.+|.. .+.+
T Consensus       193 ~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l  228 (248)
T PRK10444        193 ETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDI  228 (248)
T ss_pred             cEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHH
Confidence            999999997 799999999999999999874 4444

>PTZ00445 p36-lilke protein; Provisional

Probab=99.35  E-value=1.8e-12  Score=105.56  Aligned_cols=132  Identities=12%  Similarity=0.150  Sum_probs=92.0

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH----------
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEIL----------  194 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~----------  194 (280)
                      -.+.+.+|+|.||++.+....+.+..     -.....  ..+-|..+.+++.|++.|++++|+|=++...          
T Consensus        42 GIk~Va~D~DnTlI~~HsgG~~~~~~-----~~~~~~--~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~I  114 (219)
T PTZ00445         42 GIKVIASDFDLTMITKHSGGYIDPDN-----DDIRVL--TSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYI  114 (219)
T ss_pred             CCeEEEecchhhhhhhhcccccCCCc-----chhhhh--ccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCccee
Confidence            34788999999998754443220000     000011  2355889999999999999999999984322          


Q ss_pred             ----HHHHHHhhCCCc----cccccc-------e-----EecCCCHHH--H--HHHHHHcCCCCCcEEEEeCCcCCcccc
Q psy8911         195 ----HAKQILNLINLN----QYFSNK-------E-----IYPGPKTTH--F--ESLKKATGIEYKDMVFFDDEERNSHDV  250 (280)
Q Consensus       195 ----~~~~~l~~~gl~----~~f~~~-------~-----~~~~~k~~~--~--~~~~~~~~~~~~~~l~igD~~~di~~a  250 (280)
                          .++..|++-+-+    ..+.+.       .     --.+|.+..  |  +.++++.|++|++|+||+|+..|+++|
T Consensus       115 sg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA  194 (219)
T PTZ00445        115 SGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNA  194 (219)
T ss_pred             chHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHH
Confidence                567777754332    222210       0     001255555  6  999999999999999999999999999


Q ss_pred             cccCceEEEECCC
Q psy8911         251 SPLGVTCIHVKKG  263 (280)
Q Consensus       251 ~~aG~~~i~v~~g  263 (280)
                      +++|+++++++.+
T Consensus       195 ~~lGi~ai~f~~~  207 (219)
T PTZ00445        195 LKEGYIALHVTGN  207 (219)
T ss_pred             HHCCCEEEEcCCh
Confidence            9999999999853

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.34  E-value=9.1e-13  Score=109.95  Aligned_cols=98  Identities=18%  Similarity=0.225  Sum_probs=83.9

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc-eEe--------------cCCCHHHHHHHHH
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-EIY--------------PGPKTTHFESLKK  228 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~-~~~--------------~~~k~~~~~~~~~  228 (280)
                      .+++||+.++++.++++|++++|+|++ ....++.+.+.+|++..+... .+.              ...|...+.++++
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg-~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~  154 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGG-FTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA  154 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCC-hHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence            789999999999999999999999999 889999999999999877532 111              1135577899999


Q ss_pred             HcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         229 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       229 ~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      ++|+++++++++||+.+|+..-+.+|...+.-+.
T Consensus       155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~  188 (212)
T COG0560         155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK  188 (212)
T ss_pred             HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence            9999999999999999999999999988666443

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=99.34  E-value=1.7e-12  Score=99.99  Aligned_cols=118  Identities=14%  Similarity=0.138  Sum_probs=95.8

Q ss_pred             ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHH-HHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911         124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPE-ILRYLKENKCLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      .+.+++++|.||||.|.-             -+++.++++++.|.--.- -|+.|.+.|++++|+|+. ....++...+.
T Consensus         6 ~~IkLli~DVDGvLTDG~-------------ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITGr-~s~ive~Ra~~   71 (170)
T COG1778           6 KNIKLLILDVDGVLTDGK-------------LYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITGR-DSPIVEKRAKD   71 (170)
T ss_pred             hhceEEEEeccceeecCe-------------EEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeCC-CCHHHHHHHHH
Confidence            356899999999998831             233455655555432222 257789999999999999 78889999999


Q ss_pred             CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         203 INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       203 ~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      ||+.++|..+    ..|...|..+++++++.|+++.||||..+|+..-++.|.+++.
T Consensus        72 LGI~~~~qG~----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~  124 (170)
T COG1778          72 LGIKHLYQGI----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV  124 (170)
T ss_pred             cCCceeeech----HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc
Confidence            9999999752    4677889999999999999999999999999999999988654

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.33  E-value=5.8e-12  Score=101.23  Aligned_cols=124  Identities=15%  Similarity=0.060  Sum_probs=93.4

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC--------------
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS--------------  191 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~--------------  191 (280)
                      .+.+.+|.||||...... +            -.......+.||+.+.|..|++.||+++|+||-+              
T Consensus         5 ~k~lflDRDGtin~d~~~-y------------v~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~   71 (181)
T COG0241           5 QKALFLDRDGTINIDKGD-Y------------VDSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDK   71 (181)
T ss_pred             CcEEEEcCCCceecCCCc-c------------cCcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHH
Confidence            468899999999532110 1            1223357789999999999999999999999941              


Q ss_pred             cHHHHHHHHhhCCCccccccce---------E-ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         192 EILHAKQILNLINLNQYFSNKE---------I-YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       192 ~~~~~~~~l~~~gl~~~f~~~~---------~-~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ........|+..|.  -|+.+.         + ..+|++.+++.+++++++++++.++|||+..|+++|.++|+..+.+.
T Consensus        72 ~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~  149 (181)
T COG0241          72 LHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVL  149 (181)
T ss_pred             HHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEE
Confidence            12234555666664  233221         1 12488999999999999999999999999999999999999988887


Q ss_pred             CCC
Q psy8911         262 KGM  264 (280)
Q Consensus       262 ~g~  264 (280)
                      .|.
T Consensus       150 ~~~  152 (181)
T COG0241         150 TGI  152 (181)
T ss_pred             cCc
Confidence            654

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.33  E-value=4.3e-12  Score=98.91  Aligned_cols=91  Identities=20%  Similarity=0.249  Sum_probs=78.6

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh--hHHHHHHHHhCCCCccEEEEeC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT--THFANLKKATGIEYKDMVFFDD   89 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~--~~~~~~~~~~g~~p~~~l~v~D   89 (280)
                      ..=|.+++.+..++++|+++.|+||+.. .....+.+.+++    +  .|+...++  ..|.+++++++++|++|+||||
T Consensus        46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e-~RV~~~~~~l~v----~--fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGD  118 (175)
T COG2179          46 DATPELRAWLAELKEAGIKVVVVSNNKE-SRVARAAEKLGV----P--FIYRAKKPFGRAFRRALKEMNLPPEEVVMVGD  118 (175)
T ss_pred             CCCHHHHHHHHHHHhcCCEEEEEeCCCH-HHHHhhhhhcCC----c--eeecccCccHHHHHHHHHHcCCChhHEEEEcc
Confidence            3456889999999999999999999999 889999999885    4  44445444  3499999999999999999999


Q ss_pred             Cc-ccccccccCCCeEEEEcC
Q psy8911          90 EE-RNSHDVSPLGVTCILVED  109 (280)
Q Consensus        90 ~~-~~i~aa~~~G~~~i~v~~  109 (280)
                      .. .||.++..+||++|+|.+
T Consensus       119 qL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179         119 QLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             hhhhhhhcccccCcEEEEEEE
Confidence            96 599999999999999954

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=99.31  E-value=3.6e-12  Score=102.08  Aligned_cols=142  Identities=11%  Similarity=0.008  Sum_probs=101.9

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCee-E--ccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKV-M--DAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      +.+++|+|+||+.+.......... ..-.+ .  ......+..-||+.++|++|++. +.++|.|++ .+.+++.+++++
T Consensus         2 ~~lvlDLDeTLi~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~-~~~yA~~il~~l   78 (162)
T TIGR02251         2 KTLVLDLDETLVHSTFKMPKVDAD-FKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTAS-LEEYADPVLDIL   78 (162)
T ss_pred             cEEEEcCCCCcCCCCCCCCCCCCc-eEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCC-cHHHHHHHHHHH
Confidence            468999999998653221100000 00000 0  11223467889999999999988 999999999 999999999999


Q ss_pred             CCcc-ccccceEecC--CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHHHH
Q psy8911         204 NLNQ-YFSNKEIYPG--PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQK  271 (280)
Q Consensus       204 gl~~-~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~  271 (280)
                      +... +|+.......  .....+.+.++.+|.+++++|+|||++.++..+.++|+.+..........+|.+
T Consensus        79 dp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~  149 (162)
T TIGR02251        79 DRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLN  149 (162)
T ss_pred             CcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHH
Confidence            9876 8876433221  111227777888999999999999999999999999999888876555555544

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.31  E-value=3.7e-12  Score=101.22  Aligned_cols=86  Identities=9%  Similarity=0.173  Sum_probs=77.5

Q ss_pred             HHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911          20 ILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        20 ~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      +|++|+++|++++|+||++. ..++..++.+|+..+|+  ..  .++...++.+++++|++|++|+||||+.+|+.++++
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~-~~~~~~l~~~gi~~~~~--~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~  110 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKA-KLVEDRCKTLGITHLYQ--GQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEK  110 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCC-HHHHHHHHHcCCCEEEe--cc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence            89999999999999999999 88999999999999998  33  456667999999999999999999999999999999


Q ss_pred             CCCeEEEEcCCC
Q psy8911         100 LGVTCILVEDGM  111 (280)
Q Consensus       100 ~G~~~i~v~~~~  111 (280)
                      +|+. +.+.+..
T Consensus       111 ag~~-~~v~~~~  121 (154)
T TIGR01670       111 VGLS-VAVADAH  121 (154)
T ss_pred             CCCe-EecCCcC
Confidence            9997 6665554

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.30  E-value=5.9e-12  Score=106.41  Aligned_cols=97  Identities=15%  Similarity=0.170  Sum_probs=79.4

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCC----chHHHHHHHhhcCc--cccccccceecCCCh---hHHHHHHHHhC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTS----EIQGAQQLLDLFNW--NQYFDHKQIFPGQKT---THFANLKKATG   78 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~----~~~~~~~~l~~~~l--~~~fd~~~i~~~~~~---~~~~~~~~~~g   78 (280)
                      .....|+||++++|+.|+++|++++++||.+    . ..++.+++.+|+  .++|+  .+++++..   ... .+++++|
T Consensus       110 ~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~-~t~~~Llk~~gip~~~~f~--vil~gd~~~K~~K~-~~l~~~~  185 (237)
T PRK11009        110 DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTE-TVSKTLADDFHIPADNMNP--VIFAGDKPGQYTKT-QWLKKKN  185 (237)
T ss_pred             cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccH-HHHHHHHHHcCCCccccee--EEEcCCCCCCCCHH-HHHHhcC
Confidence            4557899999999999999999999999953    4 567778888999  89998  77776532   223 3555666


Q ss_pred             CCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +    ++||||+..|+.+|++||+.+|.+.++..
T Consensus       186 i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~  215 (237)
T PRK11009        186 I----RIFYGDSDNDITAAREAGARGIRILRAAN  215 (237)
T ss_pred             C----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence            5    99999999999999999999999987654

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.29  E-value=4.1e-12  Score=105.49  Aligned_cols=94  Identities=14%  Similarity=0.100  Sum_probs=74.2

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc-e-------Ee----cCCCHHHHHHHHHHc
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-E-------IY----PGPKTTHFESLKKAT  230 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~-~-------~~----~~~k~~~~~~~~~~~  230 (280)
                      .+.++||+.++|+.|+++| +++|+|++ ....++.+++++|++.+|... .       .+    .++.+......+++.
T Consensus        66 ~i~l~pga~ell~~lk~~~-~~~IVS~~-~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~  143 (203)
T TIGR02137        66 TLKPLEGAVEFVDWLRERF-QVVILSDT-FYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL  143 (203)
T ss_pred             hCCCCccHHHHHHHHHhCC-eEEEEeCC-hHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence            4679999999999999985 99999999 899999999999999888621 1       11    113333344444555


Q ss_pred             CCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         231 GIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       231 ~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      +   .++++|||+.+|+..++.+|+.++...
T Consensus       144 ~---~~~v~vGDs~nDl~ml~~Ag~~ia~~a  171 (203)
T TIGR02137       144 Y---YRVIAAGDSYNDTTMLSEAHAGILFHA  171 (203)
T ss_pred             C---CCEEEEeCCHHHHHHHHhCCCCEEecC
Confidence            5   389999999999999999999988765

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.28  E-value=7.3e-12  Score=100.68  Aligned_cols=84  Identities=12%  Similarity=0.164  Sum_probs=76.0

Q ss_pred             HHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcccccccc
Q psy8911          19 GILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS   98 (280)
Q Consensus        19 ~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~   98 (280)
                      .-++.|+++|++++|+||++. ..++..++.+++..+|+  .+  .+++..|+.+++++|++|++|++|||+.+|+.+++
T Consensus        41 ~~~~~L~~~Gi~laIiT~k~~-~~~~~~l~~lgi~~~f~--~~--kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~  115 (169)
T TIGR02726        41 MGVIVLQLCGIDVAIITSKKS-GAVRHRAEELKIKRFHE--GI--KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMK  115 (169)
T ss_pred             HHHHHHHHCCCEEEEEECCCc-HHHHHHHHHCCCcEEEe--cC--CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHH
Confidence            357889999999999999999 89999999999999999  44  46667799999999999999999999999999999


Q ss_pred             cCCCeEEEE
Q psy8911          99 PLGVTCILV  107 (280)
Q Consensus        99 ~~G~~~i~v  107 (280)
                      .+|+..+.-
T Consensus       116 ~ag~~~am~  124 (169)
T TIGR02726       116 RVGLAVAVG  124 (169)
T ss_pred             HCCCeEECc
Confidence            999887643

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.28  E-value=1.3e-11  Score=109.17  Aligned_cols=100  Identities=14%  Similarity=0.234  Sum_probs=85.7

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc-C-------ccccccccceecCC-Chh-----------
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF-N-------WNQYFDHKQIFPGQ-KTT-----------   68 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~-~-------l~~~fd~~~i~~~~-~~~-----------   68 (280)
                      ..+.++||+.++|+.|+++|++++|+||++. ..++.+++.+ +       |.+|||  .|+++. |++           
T Consensus       181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~-~yt~~im~~l~g~~~~~~~w~~yFD--~IIt~a~KP~FF~~~~pf~~v  257 (343)
T TIGR02244       181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDY-DYTDKGMKYLLGPFLGEHDWRDYFD--VVIVDARKPGFFTEGRPFRQV  257 (343)
T ss_pred             HHhccchhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhhCCcccccchHhhCc--EEEeCCCCCcccCCCCceEEE
Confidence            4567899999999999999999999999999 9999999996 7       999999  555432 110           


Q ss_pred             ------------------------HHHHHHHHhCCCCccEEEEeCCc-ccccccc-cCCCeEEEEcCCC
Q psy8911          69 ------------------------HFANLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCILVEDGM  111 (280)
Q Consensus        69 ------------------------~~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~-~~G~~~i~v~~~~  111 (280)
                                              .+....+.+|+.+++++||||+. .||.+|+ .+||++++|.+..
T Consensus       258 ~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL  326 (343)
T TIGR02244       258 DVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPEL  326 (343)
T ss_pred             eCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhH
Confidence                                    17888999999999999999996 4899998 8999999996654

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PLN02954 phosphoserine phosphatase

Probab=99.27  E-value=2.2e-11  Score=102.62  Aligned_cols=97  Identities=22%  Similarity=0.321  Sum_probs=77.8

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc--cccccccee-----------------cCCChhHHH
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN--QYFDHKQIF-----------------PGQKTTHFA   71 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~--~~fd~~~i~-----------------~~~~~~~~~   71 (280)
                      ..++||+.++|+.|+++|++++|+|++.. ..++.+++.+|+.  .+|+....+                 ...+...++
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~  161 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFR-QMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ  161 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence            56899999999999999999999999999 8999999999986  466421111                 112334488


Q ss_pred             HHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          72 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        72 ~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      .+++.+|.  ++|+||||+.+|+.+|+++|+.++...++
T Consensus       162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~  198 (224)
T PLN02954        162 HIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGG  198 (224)
T ss_pred             HHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCC
Confidence            88888875  69999999999999999999987765443

>TIGR01686 FkbH FkbH-like domain

Probab=99.25  E-value=7.1e-12  Score=111.41  Aligned_cols=91  Identities=21%  Similarity=0.280  Sum_probs=81.0

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh----cCccccccccceecCCChhHHHHHHHHhCCCCccEEEE
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL----FNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFF   87 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~----~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v   87 (280)
                      .+|||+.++|+.|+++|++++|+||++. ..+..+++.    +++.++|+.+.+...++...++.+++++|+.|++|+||
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~-~~a~~~l~~~~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfi  109 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDE-DDAKKVFERRKDFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFI  109 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHhCccccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEE
Confidence            4789999999999999999999999999 899999999    89999999433334456667999999999999999999


Q ss_pred             eCCcccccccccCCCe
Q psy8911          88 DDEERNSHDVSPLGVT  103 (280)
Q Consensus        88 ~D~~~~i~aa~~~G~~  103 (280)
                      ||++.|+.++++++-.
T Consensus       110 dD~~~d~~~~~~~lp~  125 (320)
T TIGR01686       110 DDNPAERANVKITLPV  125 (320)
T ss_pred             CCCHHHHHHHHHHCCC
Confidence            9999999999997655

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.25  E-value=6.7e-12  Score=111.08  Aligned_cols=99  Identities=15%  Similarity=0.114  Sum_probs=82.6

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc-----ce----e------cCCChhHHH
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK-----QI----F------PGQKTTHFA   71 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~-----~i----~------~~~~~~~~~   71 (280)
                      ....++++||+.++|+.|+++|++++|+|++.. ...+.+++.+++...|...     ..    +      ...|...++
T Consensus       176 v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~-~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~  254 (322)
T PRK11133        176 VRENLPLMPGLTELVLKLQALGWKVAIASGGFT-YFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLT  254 (322)
T ss_pred             HHHhCCCChhHHHHHHHHHHcCCEEEEEECCcc-hhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHH
Confidence            345688999999999999999999999999998 7889999999987654310     11    1      113444599


Q ss_pred             HHHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          72 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        72 ~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      .+++++|++|++|++|||+.+|+.+++++|+..++
T Consensus       255 ~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~  289 (322)
T PRK11133        255 RLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY  289 (322)
T ss_pred             HHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence            99999999999999999999999999999998776

>KOG4549|consensus

Probab=99.24  E-value=6.5e-11  Score=87.54  Aligned_cols=121  Identities=31%  Similarity=0.416  Sum_probs=102.6

Q ss_pred             cceeEEEecCCCCCCccccccc-CcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      .|++..||+|-|+|+.+++.+. .||........ .++.++..|+.++.+|..|+++|+.++++|+++.++.+...|+.+
T Consensus         4 ~p~~~~fdldytiwP~~vdthl~~pfkP~k~~~g-~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f   82 (144)
T KOG4549|consen    4 KPEAMQFDLDYTIWPRLVDTHLDYPFKPFKCECG-SKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF   82 (144)
T ss_pred             CCceeEEeccceeeeEEEEecccccccccccCcc-cCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh
Confidence            5788999999999999999887 55554432221 567789999999999999999999999999999999999999999


Q ss_pred             CCcc---------ccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCC
Q psy8911         204 NLNQ---------YFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERN  246 (280)
Q Consensus       204 gl~~---------~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~d  246 (280)
                      .+..         .|.++..+++.|..+|..+-+..|+...+..+++|-.++
T Consensus        83 kvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k~~~~fdDesrn  134 (144)
T KOG4549|consen   83 KVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEKNKQVFDDESRN  134 (144)
T ss_pred             ccCcccccchhhhcCceeeecCcccchhHHHHhhccCcchhceeeecccccC
Confidence            8764         444555677789999999999999999999999999887

>KOG2882|consensus

Probab=99.23  E-value=1.1e-10  Score=99.56  Aligned_cols=214  Identities=16%  Similarity=0.178  Sum_probs=135.2

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh---cCccccccccceecCCChhH-HHHHHHHhCCCCccEEE
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL---FNWNQYFDHKQIFPGQKTTH-FANLKKATGIEYKDMVF   86 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~---~~l~~~fd~~~i~~~~~~~~-~~~~~~~~g~~p~~~l~   86 (280)
                      -.+.||+.|+|..|++.|.++.++||++. ...+...++   +|+.. +....|+++..... |.+-..   ...+.+.+
T Consensus        37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNSt-ksr~~y~kK~~~lG~~~-v~e~~i~ssa~~~a~ylk~~~---~~~k~Vyv  111 (306)
T KOG2882|consen   37 EKPIPGSPEALNLLKSLGKQIIFVTNNST-KSREQYMKKFAKLGFNS-VKEENIFSSAYAIADYLKKRK---PFGKKVYV  111 (306)
T ss_pred             CCCCCChHHHHHHHHHcCCcEEEEeCCCc-chHHHHHHHHHHhCccc-cCcccccChHHHHHHHHHHhC---cCCCeEEE
Confidence            46899999999999999999999999998 666665544   46544 44345665543322 332221   44566777


Q ss_pred             EeCCcccccccccCCCeEEEEcCCCchhhhhccccccc-------cceeEEEecCCCCCCcccccccCcccccCCeeEcc
Q psy8911          87 FDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFI-------ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDA  159 (280)
Q Consensus        87 v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~-------~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~  159 (280)
                      +|-.... +...++|+............   .+...+.       -..++++++|                        .
T Consensus       112 ig~~gi~-~eL~~aG~~~~g~~~~~~~~---~~~~~~~~~~~~d~~VgAVvvg~D------------------------~  163 (306)
T KOG2882|consen  112 IGEEGIR-EELDEAGFEYFGGGPDGKDT---DGAKSFVLSIGLDPDVGAVVVGYD------------------------E  163 (306)
T ss_pred             ecchhhh-HHHHHcCceeecCCCCcccc---cccccchhhcCCCCCCCEEEEecc------------------------c
Confidence            7764433 56677887766554322111   0000100       0123333333                        1


Q ss_pred             CCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc---ccc--------eEecCCCHHHHHHHHH
Q psy8911         160 KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF---SNK--------EIYPGPKTTHFESLKK  228 (280)
Q Consensus       160 ~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f---~~~--------~~~~~~k~~~~~~~~~  228 (280)
                      +   . -|+.....+.+|++-+. +.++||.+....   .....-+..-.   ..+        .+.++|.+.++..+++
T Consensus       164 h---f-sy~KL~kA~~yLqnP~c-lflatn~D~~~p---~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~  235 (306)
T KOG2882|consen  164 H---F-SYPKLMKALNYLQNPGC-LFLATNRDATTP---PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLE  235 (306)
T ss_pred             c---c-CHHHHHHHHHHhCCCCc-EEEeccCccccC---CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHH
Confidence            1   1 24556668888998876 679999832111   11111122111   111        2334678889999999


Q ss_pred             HcCCCCCcEEEEeCCcC-CcccccccCceEEEECCCCC
Q psy8911         229 ATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       229 ~~~~~~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~~  265 (280)
                      +++++|++++||||+.. ||.-+++.|+++++|-.|.+
T Consensus       236 ~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~  273 (306)
T KOG2882|consen  236 KFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVT  273 (306)
T ss_pred             HcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcC
Confidence            99999999999999998 99999999999999987764

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.23  E-value=1.9e-11  Score=101.95  Aligned_cols=89  Identities=18%  Similarity=0.180  Sum_probs=78.6

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--ccccceEecCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFSNKEIYPGPKTTHFESLKKATGIEYKDMVFF  240 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~i  240 (280)
                      ...++|++.++|+.|+++|++++++|+. ....+....+.+||.+  +|....  +.|.+.+|..+++++++++++++||
T Consensus       125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD-~~~~a~~~~~~lgi~~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~v  201 (215)
T PF00702_consen  125 RDPLRPGAKEALQELKEAGIKVAILTGD-NESTASAIAKQLGIFDSIVFARVI--GKPEPKIFLRIIKELQVKPGEVAMV  201 (215)
T ss_dssp             EEEBHTTHHHHHHHHHHTTEEEEEEESS-EHHHHHHHHHHTTSCSEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred             cCcchhhhhhhhhhhhccCcceeeeecc-cccccccccccccccccccccccc--ccccchhHHHHHHHHhcCCCEEEEE
Confidence            3478999999999999999999999998 9999999999999976  444322  3566678899999999999999999


Q ss_pred             eCCcCCcccccccC
Q psy8911         241 DDEERNSHDVSPLG  254 (280)
Q Consensus       241 gD~~~di~~a~~aG  254 (280)
                      ||+.+|+.++++||
T Consensus       202 GDg~nD~~al~~Ag  215 (215)
T PF00702_consen  202 GDGVNDAPALKAAG  215 (215)
T ss_dssp             ESSGGHHHHHHHSS
T ss_pred             ccCHHHHHHHHhCc
Confidence            99999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.22  E-value=1.3e-11  Score=103.95  Aligned_cols=94  Identities=11%  Similarity=0.032  Sum_probs=74.7

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc--cccccceecCCC-------h----------
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ--YFDHKQIFPGQK-------T----------   67 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~--~fd~~~i~~~~~-------~----------   67 (280)
                      +...++++||+.++|+.|+++|++++|+||+.. ..++.+++.+ +..  .+.....+.++.       +          
T Consensus        69 ~~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~  146 (219)
T PRK09552         69 LLETAEIREGFHEFVQFVKENNIPFYVVSGGMD-FFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCG  146 (219)
T ss_pred             HHhCCCcCcCHHHHHHHHHHcCCeEEEECCCcH-HHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCC
Confidence            445689999999999999999999999999999 8999999987 543  221002222211       0          


Q ss_pred             hHHHHHHHHhCCCCccEEEEeCCcccccccccCCC
Q psy8911          68 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV  102 (280)
Q Consensus        68 ~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~  102 (280)
                      .....++++++..+++|+||||+.+|+.+|+++|+
T Consensus       147 ~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~  181 (219)
T PRK09552        147 CCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADK  181 (219)
T ss_pred             CchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCc
Confidence            01357889999999999999999999999999999

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.22  E-value=3.5e-11  Score=98.37  Aligned_cols=87  Identities=13%  Similarity=0.210  Sum_probs=72.2

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC------------------------
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ------------------------   65 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~------------------------   65 (280)
                      .++++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|+  .+++++                        
T Consensus        70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~-~~~~~~l~~~~l~~~f~--~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~  146 (188)
T TIGR01489        70 SAPIDPGFKEFIAFIKEHGIDFIVISDGND-FFIDPVLEGIGEKDVFI--EIYSNPASFDNDGRHIVWPHHCHGCCSCPC  146 (188)
T ss_pred             hCCCCccHHHHHHHHHHcCCcEEEEeCCcH-HHHHHHHHHcCChhhee--EEeccCceECCCCcEEEecCCCCccCcCCC
Confidence            468999999999999999999999999999 88999999999999999  566421                        


Q ss_pred             ---ChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCC
Q psy8911          66 ---KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV  102 (280)
Q Consensus        66 ---~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~  102 (280)
                         |...++.+.+..   |++|+||||+.+|+++|+++++
T Consensus       147 g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~  183 (188)
T TIGR01489       147 GCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDV  183 (188)
T ss_pred             CCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCc
Confidence               111244444433   8999999999999999999854

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.21  E-value=7.4e-11  Score=104.46  Aligned_cols=100  Identities=12%  Similarity=0.148  Sum_probs=84.3

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC-C-------CccccccceEecC-C--------------
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-N-------LNQYFSNKEIYPG-P--------------  218 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~-g-------l~~~f~~~~~~~~-~--------------  218 (280)
                      ..+...||+.++|+.|+++|++++|+||+ ....++.+++.+ |       +.+|||.+++... |              
T Consensus       181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS-~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~  259 (343)
T TIGR02244       181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNS-DYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDV  259 (343)
T ss_pred             HHhccchhHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeC
Confidence            45678999999999999999999999999 999999999996 7       8999996543211 1              


Q ss_pred             --------C-----H------HHHHHHHHHcCCCCCcEEEEeCCcC-Cccccc-ccCceEEEECC
Q psy8911         219 --------K-----T------THFESLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVKK  262 (280)
Q Consensus       219 --------k-----~------~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~-~aG~~~i~v~~  262 (280)
                              .     +      .....+.+.+++++++++||||.+. ||..++ .+||.+++|..
T Consensus       260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p  324 (343)
T TIGR02244       260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP  324 (343)
T ss_pred             CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence                    0     0      2267888889999999999999888 999998 79999999965

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.15  E-value=6.8e-11  Score=98.02  Aligned_cols=97  Identities=14%  Similarity=0.180  Sum_probs=82.2

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc-ceE-------e--------cCCCHHHHHHHHH
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-KEI-------Y--------PGPKTTHFESLKK  228 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~-~~~-------~--------~~~k~~~~~~~~~  228 (280)
                      .++||+.++|+.++++|++++|+|++ ....++..++++|++++|.. +..       +        ..+|...++++++
T Consensus        87 ~~~~~~~~~l~~l~~~g~~v~ivS~s-~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~  165 (202)
T TIGR01490        87 ILYPEARDLIRWHKAEGHTIVLVSAS-LTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA  165 (202)
T ss_pred             hccHHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence            57999999999999999999999999 88899999999999988864 211       0        1134566888899


Q ss_pred             HcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         229 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       229 ~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +.++++++|+++|||..|+..++.+|..++..++
T Consensus       166 ~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~  199 (202)
T TIGR01490       166 EEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD  199 (202)
T ss_pred             HcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence            9999999999999999999999999988766543

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.14  E-value=7.4e-11  Score=96.50  Aligned_cols=82  Identities=11%  Similarity=0.167  Sum_probs=73.0

Q ss_pred             HHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcccccccc
Q psy8911          19 GILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS   98 (280)
Q Consensus        19 ~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~   98 (280)
                      ..++.|+++|++++|+||.+. ..++.+++.+++..+|+  .  ..++...++.+++++|++|++|+||||+.+|+.+++
T Consensus        55 ~~i~~L~~~Gi~v~I~T~~~~-~~v~~~l~~lgl~~~f~--g--~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~  129 (183)
T PRK09484         55 YGIRCLLTSGIEVAIITGRKS-KLVEDRMTTLGITHLYQ--G--QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVME  129 (183)
T ss_pred             HHHHHHHHCCCEEEEEeCCCc-HHHHHHHHHcCCceeec--C--CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHH
Confidence            578889999999999999999 89999999999988887  2  133456699999999999999999999999999999


Q ss_pred             cCCCeEE
Q psy8911          99 PLGVTCI  105 (280)
Q Consensus        99 ~~G~~~i  105 (280)
                      ++|+..+
T Consensus       130 ~aG~~~~  136 (183)
T PRK09484        130 KVGLSVA  136 (183)
T ss_pred             HCCCeEe
Confidence            9999843

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.13  E-value=1.1e-10  Score=96.91  Aligned_cols=95  Identities=17%  Similarity=0.158  Sum_probs=77.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccce------ecCC---ChhHHHHHHHHhCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQI------FPGQ---KTTHFANLKKATGI   79 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i------~~~~---~~~~~~~~~~~~g~   79 (280)
                      ..++++||+.++|+.|+++ ++++|+||+.. ..++.+++.+++..+|+....      +.+.   .......++++++.
T Consensus        65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~  142 (205)
T PRK13582         65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFY-EFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS  142 (205)
T ss_pred             HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcH-HHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence            5678899999999999999 99999999999 899999999999988863211      1111   11235566677778


Q ss_pred             CCccEEEEeCCcccccccccCCCeEE
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      .+++|+||||+.+|+.+++++|+.+.
T Consensus       143 ~~~~~v~iGDs~~D~~~~~aa~~~v~  168 (205)
T PRK13582        143 LGYRVIAAGDSYNDTTMLGEADAGIL  168 (205)
T ss_pred             hCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence            88999999999999999999998543

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.13  E-value=1.1e-10  Score=97.34  Aligned_cols=89  Identities=15%  Similarity=0.193  Sum_probs=76.3

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc--cccccceecCCChhHHHHHHHHhCCCCccEEEE
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ--YFDHKQIFPGQKTTHFANLKKATGIEYKDMVFF   87 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~--~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v   87 (280)
                      .-+++|++.++|+.|+++|++++++|+.+. ..+..+.+.+|+.+  +|.  .+.+++....|..+++.++++|++|+||
T Consensus       125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~-~~a~~~~~~lgi~~~~v~a--~~~~kP~~k~~~~~i~~l~~~~~~v~~v  201 (215)
T PF00702_consen  125 RDPLRPGAKEALQELKEAGIKVAILTGDNE-STASAIAKQLGIFDSIVFA--RVIGKPEPKIFLRIIKELQVKPGEVAMV  201 (215)
T ss_dssp             EEEBHTTHHHHHHHHHHTTEEEEEEESSEH-HHHHHHHHHTTSCSEEEEE--SHETTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred             cCcchhhhhhhhhhhhccCcceeeeecccc-ccccccccccccccccccc--cccccccchhHHHHHHHHhcCCCEEEEE
Confidence            357899999999999999999999999998 89999999999955  444  2222333345899999999999999999


Q ss_pred             eCCcccccccccCC
Q psy8911          88 DDEERNSHDVSPLG  101 (280)
Q Consensus        88 ~D~~~~i~aa~~~G  101 (280)
                      ||+.+|+.++++||
T Consensus       202 GDg~nD~~al~~Ag  215 (215)
T PF00702_consen  202 GDGVNDAPALKAAG  215 (215)
T ss_dssp             ESSGGHHHHHHHSS
T ss_pred             ccCHHHHHHHHhCc
Confidence            99999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=99.12  E-value=3.4e-10  Score=90.21  Aligned_cols=113  Identities=18%  Similarity=0.079  Sum_probs=87.6

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCc--EEEEEcCCC------cHHHHH
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKC--LVAAASRTS------EILHAK  197 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~--~~~i~T~~~------~~~~~~  197 (280)
                      .+.++||+|+||....                     .-.+.|.+.+.++++++.+.  ++.|+||+.      ....++
T Consensus        41 ik~li~DkDNTL~~~~---------------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~   99 (168)
T PF09419_consen   41 IKALIFDKDNTLTPPY---------------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAE   99 (168)
T ss_pred             ceEEEEcCCCCCCCCC---------------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHH
Confidence            4788999999997521                     23466899999999999876  599999982      256677


Q ss_pred             HHHhhCCCccccccceEecCCCHHHHHHHHHHcCC-----CCCcEEEEeCCcC-CcccccccCceEEEECCCC
Q psy8911         198 QILNLINLNQYFSNKEIYPGPKTTHFESLKKATGI-----EYKDMVFFDDEER-NSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       198 ~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~-----~~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~  264 (280)
                      .+-+.+|+. +|    .....||..+..+++.++.     +|+|+++|||... |+..|..+|+.+|+|+.|.
T Consensus       100 ~~~~~lgIp-vl----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv  167 (168)
T PF09419_consen  100 ALEKALGIP-VL----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV  167 (168)
T ss_pred             HHHHhhCCc-EE----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence            788888855 22    2233555556677777654     5999999999987 9999999999999999885

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.09  E-value=4.9e-11  Score=102.78  Aligned_cols=97  Identities=15%  Similarity=0.152  Sum_probs=81.2

Q ss_pred             cCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc--------eecCCChhHHHHHHHHhCCCCccEE
Q psy8911          14 YPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ--------IFPGQKTTHFANLKKATGIEYKDMV   85 (280)
Q Consensus        14 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~--------i~~~~~~~~~~~~~~~~g~~p~~~l   85 (280)
                      |+++.+.++.|++.+++++++||.+. ......+..+++..+|+.+.        +...+.+..|+.+++++|++|++|+
T Consensus       122 y~~l~~a~~~L~~~~~~~~iatn~~~-~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  200 (257)
T TIGR01458       122 YQILNQAFRLLLDGAKPLLIAIGKGR-YYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAV  200 (257)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEeCCCC-CCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEE
Confidence            78999999999999999999999988 66666677778888887221        1123344459999999999999999


Q ss_pred             EEeCCc-ccccccccCCCeEEEEcCCC
Q psy8911          86 FFDDEE-RNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        86 ~v~D~~-~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ||||+. .|+.+|+++|+++++|.+|.
T Consensus       201 ~vGD~~~~Di~~a~~~G~~~i~v~~G~  227 (257)
T TIGR01458       201 MIGDDCRDDVGGAQDCGMRGIQVRTGK  227 (257)
T ss_pred             EECCCcHHHHHHHHHcCCeEEEECCCC
Confidence            999996 89999999999999998875

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PRK08238 hypothetical protein; Validated

Probab=99.09  E-value=2.7e-10  Score=105.84  Aligned_cols=96  Identities=16%  Similarity=0.132  Sum_probs=73.3

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCH-HHHHHHHHHcCCCCCcE
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKT-THFESLKKATGIEYKDM  237 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~-~~~~~~~~~~~~~~~~~  237 (280)
                      ...+++||+.++|++++++|++++|+|++ ....++.+++++|+   |+.+...++   .++ +....+.+.++  .+++
T Consensus        69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas-~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~  142 (479)
T PRK08238         69 ATLPYNEEVLDYLRAERAAGRKLVLATAS-DERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGF  142 (479)
T ss_pred             hhCCCChhHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCe
Confidence            34567899999999999999999999999 89999999999998   665432221   111 11233445544  4669


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      +|+||+.+|+..++.+| +.+.|+.+.
T Consensus       143 ~yvGDS~~Dlp~~~~A~-~av~Vn~~~  168 (479)
T PRK08238        143 DYAGNSAADLPVWAAAR-RAIVVGASP  168 (479)
T ss_pred             eEecCCHHHHHHHHhCC-CeEEECCCH
Confidence            99999999999999999 777887543

>TIGR01684 viral_ppase viral phosphatase

Probab=99.08  E-value=2.9e-10  Score=97.56  Aligned_cols=106  Identities=21%  Similarity=0.213  Sum_probs=81.7

Q ss_pred             ccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC-CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHH
Q psy8911         120 RSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEILHAKQ  198 (280)
Q Consensus       120 ~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~  198 (280)
                      ...|..++.+.||+||||+..                    ..++++- ||+.++|++|+++|++++|+||+ .++.+..
T Consensus       120 ~~~~~~~kvIvFDLDgTLi~~--------------------~~~v~irdPgV~EaL~~LkekGikLaIaTS~-~Re~v~~  178 (301)
T TIGR01684       120 SKVFEPPHVVVFDLDSTLITD--------------------EEPVRIRDPRIYDSLTELKKRGCILVLWSYG-DRDHVVE  178 (301)
T ss_pred             ccccccceEEEEecCCCCcCC--------------------CCccccCCHHHHHHHHHHHHCCCEEEEEECC-CHHHHHH
Confidence            346678899999999999852                    2235455 99999999999999999999999 8999999


Q ss_pred             HHhhCCCccccccceEecC----------------------------------CC-HHHHHHHHHHcCCCCCcEE-EEeC
Q psy8911         199 ILNLINLNQYFSNKEIYPG----------------------------------PK-TTHFESLKKATGIEYKDMV-FFDD  242 (280)
Q Consensus       199 ~l~~~gl~~~f~~~~~~~~----------------------------------~k-~~~~~~~~~~~~~~~~~~l-~igD  242 (280)
                      .++++||..||+.+.+.+.                                  || |......+++.|+..=.++ .|+|
T Consensus       179 ~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDD  258 (301)
T TIGR01684       179 SMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDD  258 (301)
T ss_pred             HHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEecc
Confidence            9999999999986533221                                  22 2336778888888765555 6677


Q ss_pred             CcCC
Q psy8911         243 EERN  246 (280)
Q Consensus       243 ~~~d  246 (280)
                      =..+
T Consensus       259 l~~N  262 (301)
T TIGR01684       259 LADN  262 (301)
T ss_pred             Cccc
Confidence            6654

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.07  E-value=5.9e-11  Score=103.52  Aligned_cols=99  Identities=12%  Similarity=0.109  Sum_probs=75.9

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCchHHH-HHHHhhcCccccccccce--------ecCCChhHHHHHHHHhCCCCcc
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGA-QQLLDLFNWNQYFDHKQI--------FPGQKTTHFANLKKATGIEYKD   83 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~-~~~l~~~~l~~~fd~~~i--------~~~~~~~~~~~~~~~~g~~p~~   83 (280)
                      .|+++.++++.|+++|+ ++|+||.+. ... ...+...++..+|+.+..        .+.+....|..+++++|++|++
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~-~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~  221 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDP-WHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPAR  221 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCC-CCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhh
Confidence            48999999999999997 799999887 332 122334466667662211        1123334599999999999999


Q ss_pred             EEEEeCCc-ccccccccCCCeEEEEcCCCch
Q psy8911          84 MVFFDDEE-RNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        84 ~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      |+||||+. .||.+|+++||++++|.+|...
T Consensus       222 ~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~  252 (279)
T TIGR01452       222 TLMVGDRLETDILFGHRCGMTTVLVLSGVSR  252 (279)
T ss_pred             EEEECCChHHHHHHHHHcCCcEEEECCCCCC
Confidence            99999995 8999999999999999887653

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.05  E-value=3.5e-10  Score=93.72  Aligned_cols=97  Identities=15%  Similarity=0.243  Sum_probs=80.3

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccce------ecC----------CChhHHHHHH
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQI------FPG----------QKTTHFANLK   74 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i------~~~----------~~~~~~~~~~   74 (280)
                      ..++||+.++|+.++++|++++|+|+++. ..++.+++.+++..+|.....      +.+          .+...++..+
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~-~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~  164 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLT-ILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL  164 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence            46899999999999999999999999999 899999999999888863111      111          1122377888


Q ss_pred             HHhCCCCccEEEEeCCcccccccccCCCeEEEEc
Q psy8911          75 KATGIEYKDMVFFDDEERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        75 ~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~  108 (280)
                      ++.++++++|+++|||..|+..++.+|...+..+
T Consensus       165 ~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~  198 (202)
T TIGR01490       165 AEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP  198 (202)
T ss_pred             HHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence            8999999999999999999999999998776544

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=99.04  E-value=5.9e-10  Score=87.95  Aligned_cols=95  Identities=21%  Similarity=0.313  Sum_probs=77.2

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc----Cc----ccccccccee-cCCChhHHHHHHHHhCCC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF----NW----NQYFDHKQIF-PGQKTTHFANLKKATGIE   80 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~----~l----~~~fd~~~i~-~~~~~~~~~~~~~~~g~~   80 (280)
                      .-.+||++.+.|+..+++|++++|-|+++. . ++.++-.+    +|    .+|||  .-+ ...+...|.++++..|++
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV-~-AQkL~Fghs~agdL~~lfsGyfD--ttiG~KrE~~SY~kIa~~iGl~  176 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSV-K-AQKLFFGHSDAGDLNSLFSGYFD--TTIGKKRESQSYAKIAGDIGLP  176 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCc-h-hHHHhhcccccccHHhhhcceee--ccccccccchhHHHHHHhcCCC
Confidence            457899999999999999999999999999 4 44443322    33    35666  322 223455699999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEc
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~  108 (280)
                      |.+++|+.|.+..+.||+.+||+++++.
T Consensus       177 p~eilFLSDn~~EL~AA~~vGl~t~l~~  204 (229)
T COG4229         177 PAEILFLSDNPEELKAAAGVGLATGLAV  204 (229)
T ss_pred             chheEEecCCHHHHHHHHhcchheeeee
Confidence            9999999999999999999999999873

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.03  E-value=2.4e-09  Score=92.17  Aligned_cols=91  Identities=10%  Similarity=0.023  Sum_probs=72.8

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc------------eEe-cCC------CH-H
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK------------EIY-PGP------KT-T  221 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~------------~~~-~~~------k~-~  221 (280)
                      ..+.+.||+.++++.|+++|++++|+|++ ....++..|+++|+.+.+..+            ..+ ++|      |. .
T Consensus       118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G-~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~  196 (277)
T TIGR01544       118 SDVMLKDGYENFFDKLQQHSIPVFIFSAG-IGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHD  196 (277)
T ss_pred             cCCccCcCHHHHHHHHHHCCCcEEEEeCC-cHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHH
Confidence            35789999999999999999999999999 889999999999986444321            111 112      22 3


Q ss_pred             HHHHHHHHcC--CCCCcEEEEeCCcCCccccccc
Q psy8911         222 HFESLKKATG--IEYKDMVFFDDEERNSHDVSPL  253 (280)
Q Consensus       222 ~~~~~~~~~~--~~~~~~l~igD~~~di~~a~~a  253 (280)
                      .++..++.++  .++++||+|||+.+|+.+|...
T Consensus       197 v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~  230 (277)
T TIGR01544       197 VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV  230 (277)
T ss_pred             HHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence            3556788888  8999999999999999998775

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=99.01  E-value=1.1e-09  Score=94.19  Aligned_cols=118  Identities=17%  Similarity=0.148  Sum_probs=83.0

Q ss_pred             cceeEEEecCCCCCCccccc----cc-CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc---HHH
Q psy8911         125 ISNHLSKKLDYTLWPLHVHD----LV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE---ILH  195 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~----~~-~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~---~~~  195 (280)
                      .+..++||+|+|+++.....    .. .++.... .+..  ......++||+.++|+.|+++|++++++||+ .   ...
T Consensus        74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv--~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR-~~~~~~~  150 (266)
T TIGR01533        74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWV--QAAQAKPVAGALDFLNYANSKGVKIFYVSNR-SEKEKAA  150 (266)
T ss_pred             CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHH--HcCCCCcCccHHHHHHHHHHCCCeEEEEeCC-CcchHHH
Confidence            35689999999998765321    01 2221111 1111  1235678999999999999999999999998 5   334


Q ss_pred             HHHHHhhCCCcccc-ccceEec--CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccc
Q psy8911         196 AKQILNLINLNQYF-SNKEIYP--GPKTTHFESLKKATGIEYKDMVFFDDEERNSHD  249 (280)
Q Consensus       196 ~~~~l~~~gl~~~f-~~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~  249 (280)
                      +...|+.+|+..++ +.+...+  .+|+.....+.+.+++    +++|||+..|+.+
T Consensus       151 T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~  203 (266)
T TIGR01533       151 TLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI----VLLFGDNLLDFDD  203 (266)
T ss_pred             HHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----EEEECCCHHHhhh
Confidence            55788999998654 4333322  3677778888887777    8999999999865

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>COG4996 Predicted phosphatase [General function prediction only]

Probab=99.00  E-value=1.4e-09  Score=81.16  Aligned_cols=111  Identities=21%  Similarity=0.296  Sum_probs=83.5

Q ss_pred             CcccccCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-hHHHHHHH----
Q psy8911           1 DKVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-THFANLKK----   75 (280)
Q Consensus         1 ~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-~~~~~~~~----   75 (280)
                      |.++|..+.++.+||.++++++++|..|+-++.+|.+.. ..+-..|+.+++..||+++.+-..+-. .+.-++++    
T Consensus        30 n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~-~kA~~aLral~~~~yFhy~ViePhP~K~~ML~~llr~i~~  108 (164)
T COG4996          30 NTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFE-DKAIKALRALDLLQYFHYIVIEPHPYKFLMLSQLLREINT  108 (164)
T ss_pred             cceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCch-HHHHHHHHHhchhhhEEEEEecCCChhHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999 899999999999999994333332222 22333333    


Q ss_pred             --HhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          76 --ATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        76 --~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                        ...+.|++++|+||+.-.+......=..+-++..+.+
T Consensus       109 er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~D  147 (164)
T COG4996         109 ERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKD  147 (164)
T ss_pred             hhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecc
Confidence              3468999999999998776665553333333333433

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=99.00  E-value=9.6e-10  Score=94.50  Aligned_cols=104  Identities=24%  Similarity=0.228  Sum_probs=81.0

Q ss_pred             ccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC-CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHH
Q psy8911         122 VFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEILHAKQIL  200 (280)
Q Consensus       122 ~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l  200 (280)
                      -|..++.+.||+||||+..                    ..++++. |++.++|++|+++|++++|+||+ .++.+...+
T Consensus       124 ~~~~~~~i~~D~D~TL~~~--------------------~~~v~irdp~V~EtL~eLkekGikLaIvTNg-~Re~v~~~L  182 (303)
T PHA03398        124 VWEIPHVIVFDLDSTLITD--------------------EEPVRIRDPFVYDSLDELKERGCVLVLWSYG-NREHVVHSL  182 (303)
T ss_pred             EeeeccEEEEecCCCccCC--------------------CCccccCChhHHHHHHHHHHCCCEEEEEcCC-ChHHHHHHH
Confidence            5567899999999999852                    2235455 99999999999999999999999 899999999


Q ss_pred             hhCCCccccccceEecC----------------------------------CC-HHHHHHHHHHcCCCCCcEE-EEeCCc
Q psy8911         201 NLINLNQYFSNKEIYPG----------------------------------PK-TTHFESLKKATGIEYKDMV-FFDDEE  244 (280)
Q Consensus       201 ~~~gl~~~f~~~~~~~~----------------------------------~k-~~~~~~~~~~~~~~~~~~l-~igD~~  244 (280)
                      +++|+.+||+.+.+.+.                                  || |......+++.|+..=.++ .|+|=.
T Consensus       183 e~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~  262 (303)
T PHA03398        183 KETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK  262 (303)
T ss_pred             HHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence            99999999985432211                                  23 3447888889998865555 677766


Q ss_pred             CC
Q psy8911         245 RN  246 (280)
Q Consensus       245 ~d  246 (280)
                      .+
T Consensus       263 ~N  264 (303)
T PHA03398        263 SN  264 (303)
T ss_pred             cc
Confidence            54

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=98.99  E-value=3.9e-09  Score=90.85  Aligned_cols=124  Identities=10%  Similarity=0.018  Sum_probs=86.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc----------ceecCCC-h---------h
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK----------QIFPGQK-T---------T   68 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~----------~i~~~~~-~---------~   68 (280)
                      ..+++.||+.++++.|+++|++++|+|++.. ..++.+++.+++.+.+..+          .+..+-+ +         .
T Consensus       118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~-~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~  196 (277)
T TIGR01544       118 SDVMLKDGYENFFDKLQQHSIPVFIFSAGIG-NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHD  196 (277)
T ss_pred             cCCccCcCHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHH
Confidence            4689999999999999999999999999999 9999999999987555411          1221211 1         1


Q ss_pred             HHHHHHHHhC--CCCccEEEEeCCcccccccccC-C---CeEEEEcCCCchhhhhccccccccceeEEEecCCCC
Q psy8911          69 HFANLKKATG--IEYKDMVFFDDEERNSHDVSPL-G---VTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTL  137 (280)
Q Consensus        69 ~~~~~~~~~g--~~p~~~l~v~D~~~~i~aa~~~-G---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL  137 (280)
                      .++.+++.++  .+|++||+|||+..|+.+|.-. .   .-.|++.+....+.+...+..|    -+++--|.|+
T Consensus       197 v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~----Divl~~D~t~  267 (277)
T TIGR01544       197 VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSY----DIVLVQDETL  267 (277)
T ss_pred             HHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhC----CEEEECCCCc
Confidence            1667888888  8999999999999999998766 3   2334444444333333222222    2234446666

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.99  E-value=4.3e-10  Score=90.09  Aligned_cols=103  Identities=9%  Similarity=0.063  Sum_probs=86.3

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc-cccccceecCCCh----hHHHHHHHHhCCCCccE
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ-YFDHKQIFPGQKT----THFANLKKATGIEYKDM   84 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~-~fd~~~i~~~~~~----~~~~~~~~~~g~~p~~~   84 (280)
                      .+...||+.++|++|.+. |.++|.|+++. ..++.+++.++... +|+  .+++.+..    +.|.+.++.+|.++++|
T Consensus        40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~-~yA~~il~~ldp~~~~f~--~~l~r~~~~~~~~~~~K~L~~l~~~~~~v  115 (162)
T TIGR02251        40 YVFKRPHVDEFLERVSKW-YELVIFTASLE-EYADPVLDILDRGGKVIS--RRLYRESCVFTNGKYVKDLSLVGKDLSKV  115 (162)
T ss_pred             EEEECCCHHHHHHHHHhc-CEEEEEcCCcH-HHHHHHHHHHCcCCCEEe--EEEEccccEEeCCCEEeEchhcCCChhhE
Confidence            467899999999999987 99999999999 99999999999876 888  55544322    23778888899999999


Q ss_pred             EEEeCCcccccccccCCCeEEEEcCCCchhhh
Q psy8911          85 VFFDDEERNSHDVSPLGVTCILVEDGMTNAIT  116 (280)
Q Consensus        85 l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~  116 (280)
                      |+|||++.++.++.++|+.+..+.+.....++
T Consensus       116 IiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L  147 (162)
T TIGR02251       116 IIIDNSPYSYSLQPDNAIPIKSWFGDPNDTEL  147 (162)
T ss_pred             EEEeCChhhhccCccCEeecCCCCCCCCHHHH
Confidence            99999999999999999998877655444443

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=98.98  E-value=6.2e-10  Score=93.33  Aligned_cols=98  Identities=7%  Similarity=0.031  Sum_probs=74.9

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccc-ccceecCC-------ChhHH----------
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD-HKQIFPGQ-------KTTHF----------   70 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd-~~~i~~~~-------~~~~~----------   70 (280)
                      ..++++||+.++|+.|+++|++++|+|++.. ..++.+++.++...+|- ...++.++       ....+          
T Consensus        67 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~-~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K  145 (214)
T TIGR03333        67 ETAEIREGFREFVAFINEHGIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK  145 (214)
T ss_pred             hcCcccccHHHHHHHHHHCCCeEEEECCCcH-HHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence            4578999999999999999999999999999 89999998875444441 11222221       11112          


Q ss_pred             HHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          71 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      ..++++++..+++|+||||+.+|+.+|++||+  +++++
T Consensus       146 ~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~  182 (214)
T TIGR03333       146 PSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARD  182 (214)
T ss_pred             HHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehH
Confidence            46778888899999999999999999999998  44433

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=98.95  E-value=5.7e-09  Score=87.86  Aligned_cols=107  Identities=21%  Similarity=0.286  Sum_probs=82.9

Q ss_pred             ceeccCCCHHHHHHHH--hhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceE-------------ecC---------
Q psy8911         162 TLIKYYRGVPEILRYL--KENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-------------YPG---------  217 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L--~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~-------------~~~---------  217 (280)
                      ..+++.||+.++++.+  ++.|+.+.|+|.+ ...+++.+|++.|+.+.|+.+.+             .+-         
T Consensus        68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDa-Ns~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~  146 (234)
T PF06888_consen   68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDA-NSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCP  146 (234)
T ss_pred             HcCCCCccHHHHHHHHHhcCCCceEEEEeCC-cHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCC
Confidence            4578899999999999  5689999999999 89999999999999998874311             010         


Q ss_pred             ---CCHHHHHHHHHH---cCCCCCcEEEEeCCcCCcccccccCc-eEEEECCCCCHHHH
Q psy8911         218 ---PKTTHFESLKKA---TGIEYKDMVFFDDEERNSHDVSPLGV-TCIHVKKGMSHAVL  269 (280)
Q Consensus       218 ---~k~~~~~~~~~~---~~~~~~~~l~igD~~~di~~a~~aG~-~~i~v~~g~~~~~~  269 (280)
                         -|...+..+++.   -|++.++++||||+.+|+-.+.+++- ..+..+.|++...+
T Consensus       147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~  205 (234)
T PF06888_consen  147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKL  205 (234)
T ss_pred             CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHH
Confidence               122445555555   47899999999999999999998764 45666678765554

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PTZ00445 p36-lilke protein; Provisional

Probab=98.95  E-value=1.2e-09  Score=89.17  Aligned_cols=98  Identities=13%  Similarity=0.181  Sum_probs=73.2

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCchH--------------HHHHHHhhcCcccccccc-----ceecC---------
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEIQ--------------GAQQLLDLFNWNQYFDHK-----QIFPG---------   64 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~--------------~~~~~l~~~~l~~~fd~~-----~i~~~---------   64 (280)
                      +-|....+++.|++.|++++|+|=+....              .++..|+.-+..--...+     ..+..         
T Consensus        76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl  155 (219)
T PTZ00445         76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGL  155 (219)
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcc
Confidence            56789999999999999999999776612              466677755433212200     11111         


Q ss_pred             --CChhH--H--HHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          65 --QKTTH--F--ANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        65 --~~~~~--~--~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                        +++..  |  +.+++++|+.|++|+||||+..|+++|+++|+++++++++
T Consensus       156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             cCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence              11222  5  9999999999999999999999999999999999999765

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=98.95  E-value=1.5e-09  Score=87.80  Aligned_cols=92  Identities=12%  Similarity=0.192  Sum_probs=74.4

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc------eecC-----------CChhHH
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ------IFPG-----------QKTTHF   70 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~------i~~~-----------~~~~~~   70 (280)
                      .+.++++||+.++|+.|+++|++++|+|++.. ..++.+++.+++..+|....      .+.+           .|...+
T Consensus        69 ~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l  147 (177)
T TIGR01488        69 ARQVALRPGARELISWLKERGIDTVIVSGGFD-FFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVL  147 (177)
T ss_pred             HhcCCcCcCHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHH
Confidence            45577899999999999999999999999999 89999999999987775211      1111           112237


Q ss_pred             HHHHHHhCCCCccEEEEeCCcccccccccC
Q psy8911          71 ANLKKATGIEYKDMVFFDDEERNSHDVSPL  100 (280)
Q Consensus        71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~  100 (280)
                      +..++++|+++++|++|||+.+|+.+++.+
T Consensus       148 ~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       148 KELLEESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence            777888899999999999999999988754

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=98.91  E-value=1.3e-09  Score=75.73  Aligned_cols=51  Identities=22%  Similarity=0.307  Sum_probs=47.7

Q ss_pred             cCCCHHHHHHHHHHcCCCCCcEEEEeCC-cCCcccccccCceEEEECCCCCH
Q psy8911         216 PGPKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       216 ~~~k~~~~~~~~~~~~~~~~~~l~igD~-~~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      .+|.+..|..++++++++|++|+||||+ ..||++|+++|+.+++|.+|...
T Consensus         3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~   54 (75)
T PF13242_consen    3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYS   54 (75)
T ss_dssp             STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSC
T ss_pred             CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCC
Confidence            4688999999999999999999999999 99999999999999999988743

...

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.91  E-value=1.2e-09  Score=87.05  Aligned_cols=121  Identities=17%  Similarity=0.163  Sum_probs=76.4

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC-CCHHHHHHHHhhCCcEEEEEcCCCc-------------
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSE-------------  192 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~L~~L~~~g~~~~i~T~~~~-------------  192 (280)
                      |...||+||||........           +........++ |++.+.|++|++.||+++|+||-..             
T Consensus         1 Kia~fD~DgTLi~~~s~~~-----------f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~   69 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSGKK-----------FPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF   69 (159)
T ss_dssp             SEEEE-SCTTTEE-STSTT-----------S-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred             CEEEEeCCCCccCCCCCCc-----------CcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence            4578999999974322211           01122334444 6899999999999999999999511             


Q ss_pred             HHHHHHHHhhCCCcccccc-c--eEecCCCHHHHHHHHHHcCC----CCCcEEEEeCC-----------cCCcccccccC
Q psy8911         193 ILHAKQILNLINLNQYFSN-K--EIYPGPKTTHFESLKKATGI----EYKDMVFFDDE-----------ERNSHDVSPLG  254 (280)
Q Consensus       193 ~~~~~~~l~~~gl~~~f~~-~--~~~~~~k~~~~~~~~~~~~~----~~~~~l~igD~-----------~~di~~a~~aG  254 (280)
                      ....+.+++.+++.-.+-. .  ....+|++.++..+++.++.    +.++++||||+           ..|..-|.++|
T Consensus        70 ~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~g  149 (159)
T PF08645_consen   70 HEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCG  149 (159)
T ss_dssp             HHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcC
Confidence            1345667777777622110 0  01224788999999999874    99999999996           56788888888


Q ss_pred             ceEE
Q psy8911         255 VTCI  258 (280)
Q Consensus       255 ~~~i  258 (280)
                      ++..
T Consensus       150 i~f~  153 (159)
T PF08645_consen  150 IKFY  153 (159)
T ss_dssp             --EE
T ss_pred             Cccc
Confidence            8753

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=98.90  E-value=2e-09  Score=86.65  Aligned_cols=100  Identities=16%  Similarity=0.179  Sum_probs=78.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCc--------------hHHHHHHHhhcCcccccccccee---------c--
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSE--------------IQGAQQLLDLFNWNQYFDHKQIF---------P--   63 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--------------~~~~~~~l~~~~l~~~fd~~~i~---------~--   63 (280)
                      +.+.+.||+.+.+..|++.||++.|+||.+.              ++.....|+..|.  -||  .++         |  
T Consensus        28 ~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id--~i~~Cph~p~~~c~c  103 (181)
T COG0241          28 DDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KID--GILYCPHHPEDNCDC  103 (181)
T ss_pred             HHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccc--eEEECCCCCCCCCcc
Confidence            3478999999999999999999999999643              1334445555553  344  222         1  


Q ss_pred             -CCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          64 -GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        64 -~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                       .++++.|..+++++++++++.++|||+..|+++|.++|+..+.+..+..
T Consensus       104 RKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~  153 (181)
T COG0241         104 RKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIG  153 (181)
T ss_pred             cCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcc
Confidence             2345669999999999999999999999999999999999888866543

>PLN02645 phosphoglycolate phosphatase

Probab=98.88  E-value=7.3e-09  Score=91.76  Aligned_cols=106  Identities=16%  Similarity=0.145  Sum_probs=79.0

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc---HHHHHHHHhh
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE---ILHAKQILNL  202 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~---~~~~~~~l~~  202 (280)
                      .+.+.||+|||||.                     +  -.++||+.+.|+.|+++|++++++||+ .   +......|++
T Consensus        28 ~~~~~~D~DGtl~~---------------------~--~~~~~ga~e~l~~lr~~g~~~~~~TN~-~~~~~~~~~~~l~~   83 (311)
T PLN02645         28 VETFIFDCDGVIWK---------------------G--DKLIEGVPETLDMLRSMGKKLVFVTNN-STKSRAQYGKKFES   83 (311)
T ss_pred             CCEEEEeCcCCeEe---------------------C--CccCcCHHHHHHHHHHCCCEEEEEeCC-CCCCHHHHHHHHHH
Confidence            47899999999985                     1  147899999999999999999999998 5   3333446688


Q ss_pred             CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         203 INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       203 ~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      +|+.-.++.+...    .......+++.+......+|++++..+.+.++++|+.++.
T Consensus        84 lGi~~~~~~I~ts----~~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645         84 LGLNVTEEEIFSS----SFAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG  136 (311)
T ss_pred             CCCCCChhhEeeh----HHHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence            9997666643221    1234555566666555678998888888888889987653

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=98.88  E-value=1.2e-08  Score=81.15  Aligned_cols=118  Identities=19%  Similarity=0.110  Sum_probs=79.7

Q ss_pred             eeEEEecCCCCCCccccccc-Cc---------ccccC--Ce-eEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH
Q psy8911         127 NHLSKKLDYTLWPLHVHDLV-AP---------FKKIG--QK-VMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI  193 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~-~~---------~~~~~--~~-~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~  193 (280)
                      ..+++|+|.||+.+...... ..         .....  .. ........++++||+.++|+.|++. +.++|+|++ .+
T Consensus         7 l~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~-~~   84 (156)
T TIGR02250         7 LHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTMG-TR   84 (156)
T ss_pred             eEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeCC-cH
Confidence            46799999999976543221 00         00000  00 1112345678999999999999966 999999999 99


Q ss_pred             HHHHHHHhhCCCc-cccccceEecCCCHHHHHHHH-HHcCCCCCcEEEEeCCcCC
Q psy8911         194 LHAKQILNLINLN-QYFSNKEIYPGPKTTHFESLK-KATGIEYKDMVFFDDEERN  246 (280)
Q Consensus       194 ~~~~~~l~~~gl~-~~f~~~~~~~~~k~~~~~~~~-~~~~~~~~~~l~igD~~~d  246 (280)
                      .++..++++++.. .+|....++.+.-...+.+-+ .-++.+.+.+++|+|++.-
T Consensus        85 ~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~~~KdL~~i~~~d~~~vvivDd~~~~  139 (156)
T TIGR02250        85 AYAQAIAKLIDPDGKYFGDRIISRDESGSPHTKSLLRLFPADESMVVIIDDREDV  139 (156)
T ss_pred             HHHHHHHHHhCcCCCeeccEEEEeccCCCCccccHHHHcCCCcccEEEEeCCHHH
Confidence            9999999999998 588433232221112233334 3457899999999999864

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.87  E-value=5.5e-09  Score=99.65  Aligned_cols=86  Identities=12%  Similarity=0.080  Sum_probs=72.5

Q ss_pred             eeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8911         163 LIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFD  241 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~ig  241 (280)
                      +..++||+.++|++|+++| ++++|+||. ....++.+++++|+.++|...  .+.+|+.    ++++++..+++++|||
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd-~~~~a~~i~~~lgi~~~f~~~--~p~~K~~----~v~~l~~~~~~v~~vG  454 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGGIKLVMLTGD-NRSAAEAVAAELGIDEVHAEL--LPEDKLA----IVKELQEEGGVVAMVG  454 (556)
T ss_pred             cccchHhHHHHHHHHHHcCCCeEEEEeCC-CHHHHHHHHHHhCCCeeeccC--CHHHHHH----HHHHHHHcCCEEEEEE
Confidence            3568999999999999999 999999999 899999999999999999753  2234443    4444445778999999


Q ss_pred             CCcCCcccccccCc
Q psy8911         242 DEERNSHDVSPLGV  255 (280)
Q Consensus       242 D~~~di~~a~~aG~  255 (280)
                      |+.+|+.++++||+
T Consensus       455 Dg~nD~~al~~A~v  468 (556)
T TIGR01525       455 DGINDAPALAAADV  468 (556)
T ss_pred             CChhHHHHHhhCCE
Confidence            99999999999994

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=98.84  E-value=1.8e-08  Score=85.16  Aligned_cols=43  Identities=21%  Similarity=0.283  Sum_probs=36.5

Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         219 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       219 k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      |...+..+++++|++++++++|||+.+|+...+.+|..+ .+.+
T Consensus       158 Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~v-am~N  200 (230)
T PRK01158        158 KGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGV-AVAN  200 (230)
T ss_pred             hHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceE-EecC
Confidence            345578889999999999999999999999999999875 4443

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=98.83  E-value=1.4e-08  Score=84.31  Aligned_cols=97  Identities=13%  Similarity=0.076  Sum_probs=75.7

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccccee------cC------CChhHHHHHHHHh
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIF------PG------QKTTHFANLKKAT   77 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~------~~------~~~~~~~~~~~~~   77 (280)
                      .++++||+.++|+.|+++| +++|+|++.. ..++.+++.+|+..+|.....+      .+      .........+++.
T Consensus        66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~~-~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~  143 (203)
T TIGR02137        66 TLKPLEGAVEFVDWLRERF-QVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL  143 (203)
T ss_pred             hCCCCccHHHHHHHHHhCC-eEEEEeCChH-HHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence            4689999999999999985 9999999999 8999999999999888632111      11      1111134444555


Q ss_pred             CCCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          78 GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        78 g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |.   +|++|||+.+|+.+++.+|..+++...+.
T Consensus       144 ~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~  174 (203)
T TIGR02137       144 YY---RVIAAGDSYNDTTMLSEAHAGILFHAPEN  174 (203)
T ss_pred             CC---CEEEEeCCHHHHHHHHhCCCCEEecCCHH
Confidence            53   89999999999999999999998875543

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.82  E-value=5.3e-09  Score=99.76  Aligned_cols=86  Identities=12%  Similarity=0.159  Sum_probs=73.0

Q ss_pred             cceecCCHHHHHHHHHHCC-ceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911          10 HIKYYPDVPGILKYLKQNN-CLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g-~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~   88 (280)
                      +-+++||+.++|++|+++| ++++|+||.+. ..++.+++.+|+.++|.  .+...++.    .+.++++..+++|+|||
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~-~~a~~i~~~lgi~~~f~--~~~p~~K~----~~v~~l~~~~~~v~~vG  454 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNR-SAAEAVAAELGIDEVHA--ELLPEDKL----AIVKELQEEGGVVAMVG  454 (556)
T ss_pred             cccchHhHHHHHHHHHHcCCCeEEEEeCCCH-HHHHHHHHHhCCCeeec--cCCHHHHH----HHHHHHHHcCCEEEEEE
Confidence            4578999999999999999 99999999999 89999999999999998  54332222    34455555788999999


Q ss_pred             CCcccccccccCCC
Q psy8911          89 DEERNSHDVSPLGV  102 (280)
Q Consensus        89 D~~~~i~aa~~~G~  102 (280)
                      |+.+|+.+++++|+
T Consensus       455 Dg~nD~~al~~A~v  468 (556)
T TIGR01525       455 DGINDAPALAAADV  468 (556)
T ss_pred             CChhHHHHHhhCCE
Confidence            99999999999993

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=98.81  E-value=5.5e-09  Score=72.55  Aligned_cols=51  Identities=20%  Similarity=0.289  Sum_probs=45.5

Q ss_pred             CCChhHHHHHHHHhCCCCccEEEEeCC-cccccccccCCCeEEEEcCCCchh
Q psy8911          64 GQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCILVEDGMTNA  114 (280)
Q Consensus        64 ~~~~~~~~~~~~~~g~~p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~~~~~  114 (280)
                      .+....|..++++++++|++|+||||+ ..||.+|+++|+.+|+|.+|....
T Consensus         4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~   55 (75)
T PF13242_consen    4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSP   55 (75)
T ss_dssp             TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCC
T ss_pred             CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCH
Confidence            455666999999999999999999999 899999999999999998876543

...

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=98.80  E-value=1.2e-08  Score=95.47  Aligned_cols=87  Identities=17%  Similarity=0.290  Sum_probs=72.6

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCch-----------HHHHHHHhhcCccccccccceecC-------CChhHHHHHH
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEI-----------QGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLK   74 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-----------~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~   74 (280)
                      +|||+.+.|+.|+++||+++|+||++..           ..++.+++.+|+.  |+  .+++.       ++++++..++
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fd--viia~~~~~~RKP~pGm~~~a~  273 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQ--VFIAIGAGFYRKPLTGMWDHLK  273 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eE--EEEeCCCCCCCCCCHHHHHHHH
Confidence            6999999999999999999999998771           2467788888874  77  55543       3346699999


Q ss_pred             HHhC----CCCccEEEEeCCcccccccccCCCe
Q psy8911          75 KATG----IEYKDMVFFDDEERNSHDVSPLGVT  103 (280)
Q Consensus        75 ~~~g----~~p~~~l~v~D~~~~i~aa~~~G~~  103 (280)
                      +.++    +++++|+||||+..++++|+++|-+
T Consensus       274 ~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~~  306 (526)
T TIGR01663       274 EEANDGTEIQEDDCFFVGDAAGRPANGKAAGKK  306 (526)
T ss_pred             HhcCcccCCCHHHeEEeCCcccchHHHHhcCCC
Confidence            9884    9999999999999999998888864

Note that the EC number for the kinase function is: 2.7.1.78

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=98.79  E-value=2.1e-07  Score=80.59  Aligned_cols=102  Identities=14%  Similarity=0.213  Sum_probs=70.3

Q ss_pred             cCCCHHHHHHHHhhCCcEEEEEcCCCc----HHHHHHHHhhCCCcc---ccccceEec--CCCHHHHHHHHHHcCCCCCc
Q psy8911         166 YYRGVPEILRYLKENKCLVAAASRTSE----ILHAKQILNLINLNQ---YFSNKEIYP--GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       166 ~~~g~~~~L~~L~~~g~~~~i~T~~~~----~~~~~~~l~~~gl~~---~f~~~~~~~--~~k~~~~~~~~~~~~~~~~~  236 (280)
                      .++++.++++.++..+..+.++|+...    ....+.+.+++++.-   ++..+.+.+  ..|...++.+++++|+++++
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e  217 (272)
T PRK10530        138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKN  217 (272)
T ss_pred             ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHH
Confidence            356677777777777777777777522    233445556666542   122223332  36778899999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCCHHHHH
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQ  270 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~  270 (280)
                      +++|||+.+|++.++.+|+ .+.+.+  ..+.++
T Consensus       218 ~i~~GD~~NDi~m~~~ag~-~vamgn--a~~~lk  248 (272)
T PRK10530        218 VVAFGDNFNDISMLEAAGL-GVAMGN--ADDAVK  248 (272)
T ss_pred             eEEeCCChhhHHHHHhcCc-eEEecC--chHHHH
Confidence            9999999999999999997 344443  345554

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=98.79  E-value=2.3e-08  Score=83.80  Aligned_cols=110  Identities=17%  Similarity=0.135  Sum_probs=79.3

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      +++.+|+||||++..                      -.+.|...+.|++|+++|++++++|++ ....+...++.+++.
T Consensus         2 k~v~~DlDGTLl~~~----------------------~~i~~~~~~~i~~l~~~g~~~~~~TGR-~~~~~~~~~~~l~~~   58 (215)
T TIGR01487         2 KLVAIDIDGTLTEPN----------------------RMISERAIEAIRKAEKKGIPVSLVTGN-TVPFARALAVLIGTS   58 (215)
T ss_pred             cEEEEecCCCcCCCC----------------------cccCHHHHHHHHHHHHCCCEEEEEcCC-cchhHHHHHHHhCCC
Confidence            578999999998521                      124477888888888888888888888 666666677776664


Q ss_pred             ccccc------------c--------------------------------------------------------------
Q psy8911         207 QYFSN------------K--------------------------------------------------------------  212 (280)
Q Consensus       207 ~~f~~------------~--------------------------------------------------------------  212 (280)
                      .++-.            +                                                              
T Consensus        59 ~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  138 (215)
T TIGR01487        59 GPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFA  138 (215)
T ss_pred             CcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCce
Confidence            21110            0                                                              


Q ss_pred             -eEec--CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         213 -EIYP--GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       213 -~~~~--~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                       .+.+  -.|...++.+++++|++++++++|||+.+|++..+.+|+.++.
T Consensus       139 ~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam  188 (215)
T TIGR01487       139 IHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV  188 (215)
T ss_pred             EEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc
Confidence             0000  0222447888899999999999999999999999999977443

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>KOG1615|consensus

Probab=98.78  E-value=3.1e-08  Score=79.19  Aligned_cols=88  Identities=17%  Similarity=0.225  Sum_probs=71.8

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--c------cccc-----------eEecCCCHHH
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--Y------FSNK-----------EIYPGPKTTH  222 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~------f~~~-----------~~~~~~k~~~  222 (280)
                      ...++-||++++.+.|+++|.+++++|++ .+..+..+...|||..  .      |+..           .+-++.|.+.
T Consensus        85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGG-F~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~  163 (227)
T KOG1615|consen   85 QKPTLTPGIRELVSRLHARGTQVYLISGG-FRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEV  163 (227)
T ss_pred             CCCccCCCHHHHHHHHHHcCCeEEEEcCC-hHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHH
Confidence            35678899999999999999999999999 9999999999999975  2      2210           1112356677


Q ss_pred             HHHHHHHcCCCCCcEEEEeCCcCCcccccc
Q psy8911         223 FESLKKATGIEYKDMVFFDDEERNSHDVSP  252 (280)
Q Consensus       223 ~~~~~~~~~~~~~~~l~igD~~~di~~a~~  252 (280)
                      +..+.+  +.+.+.++||||..+|+++...
T Consensus       164 i~~lrk--~~~~~~~~mvGDGatDlea~~p  191 (227)
T KOG1615|consen  164 IALLRK--NYNYKTIVMVGDGATDLEAMPP  191 (227)
T ss_pred             HHHHHh--CCChheeEEecCCccccccCCc
Confidence            777766  8999999999999999988776

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=98.78  E-value=1.2e-08  Score=80.58  Aligned_cols=98  Identities=14%  Similarity=0.189  Sum_probs=79.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---CCccccccc---eEecCCCHHHHHHHHHHcCCCCCc
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNK---EIYPGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---gl~~~f~~~---~~~~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ..++||++.+.|++.++.|+++.|-|++ +...++....+-   +|..+|+..   .++.+.....|.+++...|++|.+
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSG-SV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~e  179 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSG-SVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAE  179 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCC-CchhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchh
Confidence            4689999999999999999999999999 666555555553   344555531   233333347799999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEEC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ++|+-|.+..+.+|+.+||.++++.
T Consensus       180 ilFLSDn~~EL~AA~~vGl~t~l~~  204 (229)
T COG4229         180 ILFLSDNPEELKAAAGVGLATGLAV  204 (229)
T ss_pred             eEEecCCHHHHHHHHhcchheeeee
Confidence            9999999999999999999999884

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.77  E-value=9.8e-09  Score=97.49  Aligned_cols=86  Identities=13%  Similarity=0.116  Sum_probs=73.0

Q ss_pred             eeccCCCHHHHHHHHhhCCc-EEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8911         163 LIKYYRGVPEILRYLKENKC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFD  241 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~-~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~ig  241 (280)
                      .-.++||+.++|+.|+++|+ +++++||. ....++..++++|++++|...  .+.+|.    .++++++-++++++|||
T Consensus       360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd-~~~~a~~i~~~lgi~~~f~~~--~p~~K~----~~i~~l~~~~~~v~~vG  432 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALGIEKVVMLTGD-RRAVAERVARELGIDEVHAEL--LPEDKL----EIVKELREKYGPVAMVG  432 (536)
T ss_pred             eccchHHHHHHHHHHHHcCCCcEEEEcCC-CHHHHHHHHHHcCChhhhhcc--CcHHHH----HHHHHHHhcCCEEEEEe
Confidence            34689999999999999999 99999999 899999999999999998742  223343    35555566668999999


Q ss_pred             CCcCCcccccccCc
Q psy8911         242 DEERNSHDVSPLGV  255 (280)
Q Consensus       242 D~~~di~~a~~aG~  255 (280)
                      |+.+|+.++++||+
T Consensus       433 Dg~nD~~al~~A~v  446 (536)
T TIGR01512       433 DGINDAPALAAADV  446 (536)
T ss_pred             CCHHHHHHHHhCCE
Confidence            99999999999996

.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=98.75  E-value=4.3e-08  Score=87.24  Aligned_cols=87  Identities=13%  Similarity=0.112  Sum_probs=57.4

Q ss_pred             eecCCHHHHHHHHHHC----CceEEEecCCC---chHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccE
Q psy8911          12 KYYPDVPGILKYLKQN----NCLVAAASRTS---EIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDM   84 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~----g~~~~i~Sn~~---~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~   84 (280)
                      .++||+.++++.|+++    |+++.++||+.   ....++.+.+.+|+.---+  .++.+..  .....+++.+   ..+
T Consensus        16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~--~i~~s~~--~~~~ll~~~~---~~v   88 (321)
T TIGR01456        16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPL--QVIQSHS--PYKSLVNKYE---KRI   88 (321)
T ss_pred             cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHH--HHHhhhH--HHHHHHHHcC---Cce
Confidence            4599999999999999    99999999997   3133455557788653333  4554432  1233334442   257


Q ss_pred             EEEeCCcccccccccCCCeEEE
Q psy8911          85 VFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        85 l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      ++||-+. -.+.+..+|+..+.
T Consensus        89 ~viG~~~-~~~~l~~~G~~~vv  109 (321)
T TIGR01456        89 LAVGTGS-VRGVAEGYGFQNVV  109 (321)
T ss_pred             EEEeChH-HHHHHHHcCCcccc
Confidence            8888653 35666688877653

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.74  E-value=6.1e-08  Score=87.45  Aligned_cols=135  Identities=19%  Similarity=0.192  Sum_probs=98.7

Q ss_pred             ceeEEEecCCCCCCccccccc-CcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      .++++.|||+|||.....+.. ..       +.-....+..+|....+.+..|+++|+-++|+|-+ ...-++...+...
T Consensus       222 kK~LVLDLDNTLWGGVIGedGv~G-------I~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN-~~~da~evF~khp  293 (574)
T COG3882         222 KKALVLDLDNTLWGGVIGEDGVDG-------IRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKN-TEKDAKEVFRKHP  293 (574)
T ss_pred             cceEEEecCCcccccccccccccc-------eeecCCCCchhHHHHHHHHHHHHhccEEEEEecCC-chhhHHHHHhhCC
Confidence            368999999999976554432 11       11112224567788899999999999999999999 6666666665542


Q ss_pred             C----ccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHH
Q psy8911         205 L----NQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVL  269 (280)
Q Consensus       205 l----~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~  269 (280)
                      -    .+.|....+.+.||.+.++++++++|+..+.++|++|++...+-.++-+- +..++.+-+...+
T Consensus       294 ~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~-v~Vi~~~~Dps~~  361 (574)
T COG3882         294 DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP-VSVIEFPEDPSFL  361 (574)
T ss_pred             CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc-eeeccCCCCHHHH
Confidence            1    24566667788899999999999999999999999999999988888654 3333334344433

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=98.74  E-value=4.5e-08  Score=82.38  Aligned_cols=44  Identities=20%  Similarity=0.251  Sum_probs=37.6

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +|...+..+++++|++++++++|||+.+|+...+.+|.. +.+.+
T Consensus       149 ~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~N  192 (225)
T TIGR01482       149 NKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVAN  192 (225)
T ss_pred             CHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCC
Confidence            344568899999999999999999999999999999986 55544

catalyze the same reaction as SPP.

>KOG3040|consensus

Probab=98.74  E-value=2.2e-07  Score=75.16  Aligned_cols=192  Identities=15%  Similarity=0.223  Sum_probs=109.2

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh---cCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL---FNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~---~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~   88 (280)
                      ...||+.|.|+.|+.++.++=.+||... +.-+.+.++   +|+.-  +...|+++-..  -...+++.++.|  .++|+
T Consensus        23 ~avpga~eAl~rLr~~~~kVkFvTNttk-~Sk~~l~~rL~rlgf~v--~eeei~tsl~a--a~~~~~~~~lrP--~l~v~   95 (262)
T KOG3040|consen   23 AAVPGAVEALKRLRDQHVKVKFVTNTTK-ESKRNLHERLQRLGFDV--SEEEIFTSLPA--ARQYLEENQLRP--YLIVD   95 (262)
T ss_pred             ccCCCHHHHHHHHHhcCceEEEEecCcc-hhHHHHHHHHHHhCCCc--cHHHhcCccHH--HHHHHHhcCCCc--eEEEc
Confidence            3789999999999999999999999988 665555444   45321  11144444332  456677778877  45566


Q ss_pred             CC-cccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC
Q psy8911          89 DE-ERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY  167 (280)
Q Consensus        89 D~-~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (280)
                      |. ..|...--...=++|.+...  .+.               |                               ..+-+
T Consensus        96 d~a~~dF~gidTs~pn~VVigla--pe~---------------F-------------------------------~y~~l  127 (262)
T KOG3040|consen   96 DDALEDFDGIDTSDPNCVVIGLA--PEG---------------F-------------------------------SYQRL  127 (262)
T ss_pred             ccchhhCCCccCCCCCeEEEecC--ccc---------------c-------------------------------cHHHH
Confidence            65 33443332222222222100  000               0                               00011


Q ss_pred             CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC--CCcccccc--------ceEecCCCHHHHHHHHHHcCCCCCcE
Q psy8911         168 RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI--NLNQYFSN--------KEIYPGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~--gl~~~f~~--------~~~~~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ..+-.+|...++.   .-|+-++ .+-+.+  ...+  |.-.|...        ..+..+|.+..|+.+++.+|++|+++
T Consensus       128 n~AFrvL~e~~k~---~LIai~k-gryykr--~~Gl~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~a  201 (262)
T KOG3040|consen  128 NRAFRVLLEMKKP---LLIAIGK-GRYYKR--VDGLCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEA  201 (262)
T ss_pred             HHHHHHHHcCCCC---eEEEecC-ceeeee--ccccccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHh
Confidence            1222232222221   2222222 111111  1111  11111111        12345788899999999999999999


Q ss_pred             EEEeCCcC-CcccccccCceEEEECCCC
Q psy8911         238 VFFDDEER-NSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       238 l~igD~~~-di~~a~~aG~~~i~v~~g~  264 (280)
                      +||||..+ |+-.|.+.||+.+.|+.|.
T Consensus       202 VMIGDD~~dDvgGAq~~GMrgilVkTGK  229 (262)
T KOG3040|consen  202 VMIGDDLNDDVGGAQACGMRGILVKTGK  229 (262)
T ss_pred             eEEccccccchhhHhhhcceeEEeeccc
Confidence            99999988 7888999999999998775

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.72  E-value=1.9e-08  Score=95.55  Aligned_cols=86  Identities=14%  Similarity=0.177  Sum_probs=74.1

Q ss_pred             cceecCCHHHHHHHHHHCCc-eEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911          10 HIKYYPDVPGILKYLKQNNC-LVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~-~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~   88 (280)
                      +-+++||+.++|+.|+++|+ +++++||.+. ..++.+++.+|+.++|.  .+...++    ..+.++++..+++++|||
T Consensus       360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~-~~a~~i~~~lgi~~~f~--~~~p~~K----~~~i~~l~~~~~~v~~vG  432 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRR-AVAERVARELGIDEVHA--ELLPEDK----LEIVKELREKYGPVAMVG  432 (536)
T ss_pred             eccchHHHHHHHHHHHHcCCCcEEEEcCCCH-HHHHHHHHHcCChhhhh--ccCcHHH----HHHHHHHHhcCCEEEEEe
Confidence            45789999999999999999 9999999999 99999999999999998  4433222    345666667779999999


Q ss_pred             CCcccccccccCCC
Q psy8911          89 DEERNSHDVSPLGV  102 (280)
Q Consensus        89 D~~~~i~aa~~~G~  102 (280)
                      |+.+|+.+++++|+
T Consensus       433 Dg~nD~~al~~A~v  446 (536)
T TIGR01512       433 DGINDAPALAAADV  446 (536)
T ss_pred             CCHHHHHHHHhCCE
Confidence            99999999999996

.

>PRK08238 hypothetical protein; Validated

Probab=98.69  E-value=4.4e-08  Score=91.23  Aligned_cols=94  Identities=19%  Similarity=0.224  Sum_probs=76.7

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh------hHHHHHHHHhCCCCc
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT------THFANLKKATGIEYK   82 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~------~~~~~~~~~~g~~p~   82 (280)
                      ..++++||+.++|++++++|++++|+||++. ..++.+++.+|+   ||  .++++++.      .+-..+.+.++  .+
T Consensus        69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~-~~a~~i~~~lGl---Fd--~Vigsd~~~~~kg~~K~~~l~~~l~--~~  140 (479)
T PRK08238         69 ATLPYNEEVLDYLRAERAAGRKLVLATASDE-RLAQAVAAHLGL---FD--GVFASDGTTNLKGAAKAAALVEAFG--ER  140 (479)
T ss_pred             hhCCCChhHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCC---CC--EEEeCCCccccCCchHHHHHHHHhC--cc
Confidence            4456889999999999999999999999999 899999999987   88  67665432      12444555665  46


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +++|+||+.+|+.+++.+| +.+.|....
T Consensus       141 ~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~  168 (479)
T PRK08238        141 GFDYAGNSAADLPVWAAAR-RAIVVGASP  168 (479)
T ss_pred             CeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence            6999999999999999999 888886543

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.66  E-value=9.5e-08  Score=91.23  Aligned_cols=85  Identities=13%  Similarity=0.123  Sum_probs=69.3

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDE  243 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~  243 (280)
                      -.++||+.++|++|+++|++++++|+. ....++..++++|++ +|..  ..+.+|.+.+    ++++-++++++||||+
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd-~~~~a~~ia~~lgi~-~~~~--~~p~~K~~~v----~~l~~~~~~v~~VGDg  475 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGD-NRKTAKAVAKELGIN-VRAE--VLPDDKAALI----KELQEKGRVVAMVGDG  475 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCC-CHHHHHHHHHHcCCc-EEcc--CChHHHHHHH----HHHHHcCCEEEEEeCC
Confidence            468899999999999999999999999 899999999999996 5542  1223343333    4444477999999999


Q ss_pred             cCCcccccccCce
Q psy8911         244 ERNSHDVSPLGVT  256 (280)
Q Consensus       244 ~~di~~a~~aG~~  256 (280)
                      .+|+.++++||+.
T Consensus       476 ~nD~~al~~A~vg  488 (562)
T TIGR01511       476 INDAPALAQADVG  488 (562)
T ss_pred             CccHHHHhhCCEE
Confidence            9999999999974

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.63  E-value=3.4e-08  Score=82.51  Aligned_cols=99  Identities=13%  Similarity=0.182  Sum_probs=83.4

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc-----eecC----------CChhHHHHHHH
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ-----IFPG----------QKTTHFANLKK   75 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~-----i~~~----------~~~~~~~~~~~   75 (280)
                      ++++||+.++++.|+++|++++|+|.++. ..++.+.+.+|+...+....     ++++          .|....+..++
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~-~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~  154 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFT-FLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA  154 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChH-HHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence            88999999999999999999999999999 99999999999987766221     1111          12333889999


Q ss_pred             HhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          76 ATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        76 ~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      .+|+++++++++|||.+|+..-+.+|...+.-+.+
T Consensus       155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~  189 (212)
T COG0560         155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKP  189 (212)
T ss_pred             HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCH
Confidence            99999999999999999999999999887766544

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=98.59  E-value=3.4e-07  Score=78.53  Aligned_cols=46  Identities=13%  Similarity=0.076  Sum_probs=40.7

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +|...++.+++++|++++++++|||+.+|+...+.++..+++|.+.
T Consensus       167 ~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na  212 (249)
T TIGR01485       167 GKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA  212 (249)
T ss_pred             ChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence            4556688999999999999999999999999999988888888764

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.54  E-value=1.7e-07  Score=89.58  Aligned_cols=85  Identities=14%  Similarity=0.183  Sum_probs=69.7

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDD   89 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D   89 (280)
                      .-+++||+.++|++|+++|++++++|+.+. ..++.+.+.+|+. +|.  .+...++    ..+.++++-++++|+||||
T Consensus       403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~-~~a~~ia~~lgi~-~~~--~~~p~~K----~~~v~~l~~~~~~v~~VGD  474 (562)
T TIGR01511       403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNR-KTAKAVAKELGIN-VRA--EVLPDDK----AALIKELQEKGRVVAMVGD  474 (562)
T ss_pred             cccccHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCc-EEc--cCChHHH----HHHHHHHHHcCCEEEEEeC
Confidence            346899999999999999999999999999 9999999999995 555  3322222    2334444457899999999


Q ss_pred             CcccccccccCCC
Q psy8911          90 EERNSHDVSPLGV  102 (280)
Q Consensus        90 ~~~~i~aa~~~G~  102 (280)
                      +.+|+.+++++|+
T Consensus       475 g~nD~~al~~A~v  487 (562)
T TIGR01511       475 GINDAPALAQADV  487 (562)
T ss_pred             CCccHHHHhhCCE
Confidence            9999999999996

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>KOG3120|consensus

Probab=98.53  E-value=2.6e-07  Score=75.46  Aligned_cols=105  Identities=17%  Similarity=0.290  Sum_probs=77.2

Q ss_pred             eeccCCCHHHHHHHHhhCCc-EEEEEcCCCcHHHHHHHHhhCCCccccccceEecC----------------------C-
Q psy8911         163 LIKYYRGVPEILRYLKENKC-LVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG----------------------P-  218 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~-~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~----------------------~-  218 (280)
                      .++..||+.++++.+++.|. -+.|+|.+ ....++..|++.|+.++|..+.+-+.                      | 
T Consensus        82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDa-NsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPs  160 (256)
T KOG3120|consen   82 SIPIVPGMVRLIKSAAKLGCFELIIVSDA-NSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPS  160 (256)
T ss_pred             cCCCCccHHHHHHHHHhCCCceEEEEecC-chhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCch
Confidence            46788999999999999995 99999999 88999999999999999985421110                      1 


Q ss_pred             ---CH---HHHHHHHHHcCCCCCcEEEEeCCcCCcccccccC-ceEEEECCCCCHHH
Q psy8911         219 ---KT---THFESLKKATGIEYKDMVFFDDEERNSHDVSPLG-VTCIHVKKGMSHAV  268 (280)
Q Consensus       219 ---k~---~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG-~~~i~v~~g~~~~~  268 (280)
                         |.   +.|..-.-+-|+..++++|+||+.+|+-....+. ..++..+.|++...
T Consensus       161 NmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k  217 (256)
T KOG3120|consen  161 NMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWK  217 (256)
T ss_pred             hhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHh
Confidence               11   1122222334889999999999999988887754 44444446776444

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.53  E-value=3.2e-07  Score=73.24  Aligned_cols=96  Identities=19%  Similarity=0.182  Sum_probs=75.4

Q ss_pred             cceecCCHHHHHHHHHHCCc--eEEEecCCC-------chHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCC-
Q psy8911          10 HIKYYPDVPGILKYLKQNNC--LVAAASRTS-------EIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGI-   79 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~--~~~i~Sn~~-------~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~-   79 (280)
                      +-++.|.+.+.+++|++.+-  +++|+||+.       . ..++.+-+.+|+. .|-    ....|++.+..+++.++. 
T Consensus        57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~-~~a~~~~~~lgIp-vl~----h~~kKP~~~~~i~~~~~~~  130 (168)
T PF09419_consen   57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDG-ERAEALEKALGIP-VLR----HRAKKPGCFREILKYFKCQ  130 (168)
T ss_pred             cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccH-HHHHHHHHhhCCc-EEE----eCCCCCccHHHHHHHHhhc
Confidence            34667899999999999976  499999994       4 6778888888841 111    223455667777777754 


Q ss_pred             ----CCccEEEEeCCc-ccccccccCCCeEEEEcCCC
Q psy8911          80 ----EYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        80 ----~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~  111 (280)
                          .|+++++|||+. .||-+|..+|+.+|+++.|.
T Consensus       131 ~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv  167 (168)
T PF09419_consen  131 KVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV  167 (168)
T ss_pred             cCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence                599999999996 59999999999999998874

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.52  E-value=2.6e-07  Score=92.30  Aligned_cols=91  Identities=10%  Similarity=0.066  Sum_probs=75.7

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      .++||+.+.|+.|+++|++++++|+. ....++.+++++|+.++|...  .    |+.-..++++++..+++++||||+.
T Consensus       650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd-~~~~a~~ia~~lgi~~~~~~~--~----p~~K~~~i~~l~~~~~~v~~vGDg~  722 (834)
T PRK10671        650 PLRSDSVAALQRLHKAGYRLVMLTGD-NPTTANAIAKEAGIDEVIAGV--L----PDGKAEAIKRLQSQGRQVAMVGDGI  722 (834)
T ss_pred             cchhhHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcCCCEEEeCC--C----HHHHHHHHHHHhhcCCEEEEEeCCH
Confidence            57899999999999999999999999 889999999999999888642  1    2223446677777899999999999


Q ss_pred             CCcccccccCceEEEECCC
Q psy8911         245 RNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       245 ~di~~a~~aG~~~i~v~~g  263 (280)
                      +|+.++++||+ .+.+.+|
T Consensus       723 nD~~al~~Agv-gia~g~g  740 (834)
T PRK10671        723 NDAPALAQADV-GIAMGGG  740 (834)
T ss_pred             HHHHHHHhCCe-eEEecCC
Confidence            99999999999 3444444

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.49  E-value=9.5e-07  Score=76.82  Aligned_cols=84  Identities=12%  Similarity=0.032  Sum_probs=59.3

Q ss_pred             HHHhhCCcEEEEE---cCCCcHHHHHHHHhhCCCc----cccccceEecCCCHHHHHHHHHHcCCCC-CcEEEEeCCcCC
Q psy8911         175 RYLKENKCLVAAA---SRTSEILHAKQILNLINLN----QYFSNKEIYPGPKTTHFESLKKATGIEY-KDMVFFDDEERN  246 (280)
Q Consensus       175 ~~L~~~g~~~~i~---T~~~~~~~~~~~l~~~gl~----~~f~~~~~~~~~k~~~~~~~~~~~~~~~-~~~l~igD~~~d  246 (280)
                      +.++..++...++   |+. ....+...++..++.    .+|..+.... .|...+..+++++|+++ +++++|||+.+|
T Consensus       142 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~ND  219 (273)
T PRK00192        142 RLAKDREFSEPFLWNGSEA-AKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYRRQDGVETIALGDSPND  219 (273)
T ss_pred             HHHHhcccCCceeecCchH-HHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhh
Confidence            3344555554444   544 555666667777765    4444333333 66677999999999999 999999999999


Q ss_pred             cccccccCceEEEE
Q psy8911         247 SHDVSPLGVTCIHV  260 (280)
Q Consensus       247 i~~a~~aG~~~i~v  260 (280)
                      +..++.+|+.++.-
T Consensus       220 i~m~~~ag~~vam~  233 (273)
T PRK00192        220 LPMLEAADIAVVVP  233 (273)
T ss_pred             HHHHHhCCeeEEeC
Confidence            99999999765443

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.45  E-value=3.3e-07  Score=67.38  Aligned_cols=56  Identities=20%  Similarity=0.091  Sum_probs=43.1

Q ss_pred             EEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH--HHHHHHHhhCCCc
Q psy8911         129 LSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI--LHAKQILNLINLN  206 (280)
Q Consensus       129 ~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~--~~~~~~l~~~gl~  206 (280)
                      +.||+|||||.                       .-.++||+.++|+.|+++|+++.++||+...  ......|+.+|+.
T Consensus         1 ~l~D~dGvl~~-----------------------g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~   57 (101)
T PF13344_consen    1 FLFDLDGVLYN-----------------------GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP   57 (101)
T ss_dssp             EEEESTTTSEE-----------------------TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred             CEEeCccEeEe-----------------------CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence            47999999984                       1358899999999999999999999999322  3445667889988


Q ss_pred             c
Q psy8911         207 Q  207 (280)
Q Consensus       207 ~  207 (280)
                      -
T Consensus        58 ~   58 (101)
T PF13344_consen   58 V   58 (101)
T ss_dssp             -
T ss_pred             C
Confidence            3

...

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=98.42  E-value=2.9e-07  Score=73.42  Aligned_cols=127  Identities=19%  Similarity=0.178  Sum_probs=75.3

Q ss_pred             eeEEEecCCCCCCccccccc-CcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         127 NHLSKKLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      +++++|+||||+........ ..+.    .........+.+.||+.++|+.|.+. +.++|.|++ .+.+++.+++.+.-
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~----~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~-~~~ya~~v~~~ldp   74 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFK----IIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSA-SEEYAEPVLDALDP   74 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEE----EETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS--HHHHHHHHHHHTT
T ss_pred             CEEEEeCCCcEEEEeecCCCCcccc----eeccccceeEeeCchHHHHHHHHHHh-ceEEEEEee-hhhhhhHHHHhhhh
Confidence            57899999999865433211 0000    00011223467889999999999766 999999999 99999999999987


Q ss_pred             -ccccccceEecCC--CHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         206 -NQYFSNKEIYPGP--KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       206 -~~~f~~~~~~~~~--k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                       ..+|+........  ....+.+=++.++-+++++|+|+|++.-...-..-++.+--
T Consensus        75 ~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~  131 (159)
T PF03031_consen   75 NGKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPP  131 (159)
T ss_dssp             TTSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE---
T ss_pred             hccccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEecc
Confidence             4677654322211  01111245566677899999999999864333334444333

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.34  E-value=6.4e-07  Score=89.48  Aligned_cols=89  Identities=11%  Similarity=0.101  Sum_probs=75.4

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCC
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDE   90 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~   90 (280)
                      -+++||+.+.|+.|+++|++++++|+.+. ..++.+.+.+|+.++|.  .+...+    -..++++++..+++++||||+
T Consensus       649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~-~~a~~ia~~lgi~~~~~--~~~p~~----K~~~i~~l~~~~~~v~~vGDg  721 (834)
T PRK10671        649 DPLRSDSVAALQRLHKAGYRLVMLTGDNP-TTANAIAKEAGIDEVIA--GVLPDG----KAEAIKRLQSQGRQVAMVGDG  721 (834)
T ss_pred             CcchhhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCCEEEe--CCCHHH----HHHHHHHHhhcCCEEEEEeCC
Confidence            36799999999999999999999999999 89999999999988887  443222    234667778889999999999


Q ss_pred             cccccccccCCCeEEEE
Q psy8911          91 ERNSHDVSPLGVTCILV  107 (280)
Q Consensus        91 ~~~i~aa~~~G~~~i~v  107 (280)
                      .+|+.+++++|+ .+.+
T Consensus       722 ~nD~~al~~Agv-gia~  737 (834)
T PRK10671        722 INDAPALAQADV-GIAM  737 (834)
T ss_pred             HHHHHHHHhCCe-eEEe
Confidence            999999999999 4433

>KOG4549|consensus

Probab=98.34  E-value=3e-06  Score=63.11  Aligned_cols=88  Identities=32%  Similarity=0.417  Sum_probs=77.5

Q ss_pred             cCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc---------ccccccceecCCChhHHHHHHHH
Q psy8911           6 ARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN---------QYFDHKQIFPGQKTTHFANLKKA   76 (280)
Q Consensus         6 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~---------~~fd~~~i~~~~~~~~~~~~~~~   76 (280)
                      +.+.++..|+++...|..|+++|+.++++|+++.|+.+...|+.+.+.         ..|+.+.+..+.+.++|...-+.
T Consensus        38 ~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~  117 (144)
T KOG4549|consen   38 SKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNN  117 (144)
T ss_pred             cCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhc
Confidence            467788999999999999999999999999999999999999998654         34565566677889999999999


Q ss_pred             hCCCCccEEEEeCCccc
Q psy8911          77 TGIEYKDMVFFDDEERN   93 (280)
Q Consensus        77 ~g~~p~~~l~v~D~~~~   93 (280)
                      .++...+..+++|-.+|
T Consensus       118 s~~~~k~~~~fdDesrn  134 (144)
T KOG4549|consen  118 SNSIEKNKQVFDDESRN  134 (144)
T ss_pred             cCcchhceeeecccccC
Confidence            99999999999998776

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=98.34  E-value=1.3e-06  Score=69.34  Aligned_cols=85  Identities=16%  Similarity=0.127  Sum_probs=65.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc-ccccccceecCCCh-hHHHHHH-HHhCCCCccEE
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN-QYFDHKQIFPGQKT-THFANLK-KATGIEYKDMV   85 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~-~~fd~~~i~~~~~~-~~~~~~~-~~~g~~p~~~l   85 (280)
                      ..+.++||+.++|+.|++. |.++|+||++. ..++.+++.++.. .+|.+ .+++.+.. +.+.+-+ ..++.+.+.++
T Consensus        55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~-~yA~~vl~~ldp~~~~F~~-ri~~rd~~~~~~~KdL~~i~~~d~~~vv  131 (156)
T TIGR02250        55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTR-AYAQAIAKLIDPDGKYFGD-RIISRDESGSPHTKSLLRLFPADESMVV  131 (156)
T ss_pred             EEEEECCCHHHHHHHHHhh-cEEEEEeCCcH-HHHHHHHHHhCcCCCeecc-EEEEeccCCCCccccHHHHcCCCcccEE
Confidence            3478899999999999965 99999999999 9999999999988 48931 55554332 2333334 44688999999


Q ss_pred             EEeCCcccccc
Q psy8911          86 FFDDEERNSHD   96 (280)
Q Consensus        86 ~v~D~~~~i~a   96 (280)
                      +|||++.-...
T Consensus       132 ivDd~~~~~~~  142 (156)
T TIGR02250       132 IIDDREDVWPW  142 (156)
T ss_pred             EEeCCHHHhhc
Confidence            99999754333

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=98.33  E-value=3e-06  Score=71.81  Aligned_cols=55  Identities=20%  Similarity=0.174  Sum_probs=45.8

Q ss_pred             EEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         129 LSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       129 ~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      +.+|+||||++.                    ...  +-+...+.|+.|+++|++++++|++ ....+...++.+++.
T Consensus         1 i~~DlDGTLl~~--------------------~~~--i~~~~~~al~~l~~~g~~~~i~TGR-~~~~~~~~~~~~~~~   55 (254)
T PF08282_consen    1 IFSDLDGTLLNS--------------------DGK--ISPETIEALKELQEKGIKLVIATGR-SYSSIKRLLKELGID   55 (254)
T ss_dssp             EEEECCTTTCST--------------------TSS--SCHHHHHHHHHHHHTTCEEEEECSS-THHHHHHHHHHTTHC
T ss_pred             cEEEECCceecC--------------------CCe--eCHHHHHHHHhhcccceEEEEEccC-cccccccccccccch
Confidence            479999999852                    112  4488999999999999999999999 888888888888775

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=98.32  E-value=2.5e-06  Score=70.69  Aligned_cols=41  Identities=15%  Similarity=0.229  Sum_probs=36.1

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEE
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  258 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i  258 (280)
                      +|...++.++++++++++++++|||+.+|+..++.+|+.++
T Consensus       163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence            44566899999999999999999999999999999988654

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.31  E-value=1.7e-06  Score=86.95  Aligned_cols=91  Identities=12%  Similarity=0.067  Sum_probs=74.8

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc---------------------eEecCCCHHHH
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---------------------EIYPGPKTTHF  223 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~---------------------~~~~~~k~~~~  223 (280)
                      +++||+++.|+.|+++|+++.++|+. .+..+..+.+++|+..+++..                     .++....|+.-
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD-~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K  606 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGD-SQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK  606 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence            67899999999999999999999999 999999999999998765432                     24444556555


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         224 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       224 ~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                      ..+.+.++-..+.+.|+||+.+|..+.++|++-
T Consensus       607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVG  639 (884)
T TIGR01522       607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADIG  639 (884)
T ss_pred             HHHHHHHHHCCCEEEEECCCcccHHHHHhCCee
Confidence            555555555568999999999999999999953

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=98.29  E-value=2.8e-07  Score=79.05  Aligned_cols=99  Identities=11%  Similarity=0.097  Sum_probs=66.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHH--HH-hhcCcccccccc-----ceecCCChhHHHHHHHHhCCCCcc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQ--LL-DLFNWNQYFDHK-----QIFPGQKTTHFANLKKATGIEYKD   83 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~--~l-~~~~l~~~fd~~-----~i~~~~~~~~~~~~~~~~g~~p~~   83 (280)
                      ..|+.+...+..|+ +|.+ .|+||... ..-..  .+ ..-.+...++..     .....+++..|+.++++++++|++
T Consensus       121 ~~y~~l~~a~~~l~-~g~~-~i~tN~D~-~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~  197 (249)
T TIGR01457       121 IDYEKFATATLAIR-KGAH-FIGTNGDL-AIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREE  197 (249)
T ss_pred             CCHHHHHHHHHHHH-CCCe-EEEECCCC-CCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCccc
Confidence            45666777777774 5777 88888766 22211  11 111122223310     111233445599999999999999


Q ss_pred             EEEEeCCc-ccccccccCCCeEEEEcCCCch
Q psy8911          84 MVFFDDEE-RNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        84 ~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      |+||||+. .|+.+|+++||++++|.+|...
T Consensus       198 ~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~  228 (249)
T TIGR01457       198 TLMVGDNYLTDIRAGIDAGIDTLLVHTGVTK  228 (249)
T ss_pred             EEEECCCchhhHHHHHHcCCcEEEEcCCCCC
Confidence            99999997 7999999999999999887643

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=98.26  E-value=7.4e-06  Score=69.15  Aligned_cols=106  Identities=16%  Similarity=0.283  Sum_probs=81.4

Q ss_pred             CcceecCCHHHHHHHH--HHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC---------------------
Q psy8911           9 AHIKYYPDVPGILKYL--KQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ---------------------   65 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L--~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~---------------------   65 (280)
                      ..+++.||+.++++.|  ++.|+.+.|+|++.. -+.+.+|++.|+.+.|+  .|++.+                     
T Consensus        68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs-~fI~~iL~~~gl~~~f~--~I~TNpa~~~~~G~l~v~pyh~h~C~~  144 (234)
T PF06888_consen   68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANS-FFIETILEHHGLRDCFS--EIFTNPACFDADGRLRVRPYHSHGCSL  144 (234)
T ss_pred             HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcH-hHHHHHHHhCCCccccc--eEEeCCceecCCceEEEeCccCCCCCc
Confidence            5688999999999999  568999999999999 99999999999999988  454321                     


Q ss_pred             ------ChhHHHHHHHH---hCCCCccEEEEeCCcccccccccCCCe-EEEEcCCCchhhhh
Q psy8911          66 ------KTTHFANLKKA---TGIEYKDMVFFDDEERNSHDVSPLGVT-CILVEDGMTNAITL  117 (280)
Q Consensus        66 ------~~~~~~~~~~~---~g~~p~~~l~v~D~~~~i~aa~~~G~~-~i~v~~~~~~~~~~  117 (280)
                            |.......++.   -|++.++++||||+.+|+-.+.+++-. .++.+.+.......
T Consensus       145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i  206 (234)
T PF06888_consen  145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLI  206 (234)
T ss_pred             CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHH
Confidence                  00113333333   478999999999999999999998876 44445565544443

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.25  E-value=1.1e-06  Score=68.16  Aligned_cols=81  Identities=14%  Similarity=0.209  Sum_probs=71.8

Q ss_pred             HHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911          20 ILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        20 ~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      -|+.|.+.|++++|+|.... ...+...+.+|+..+|.  .+  .++...|..+++++++.|++|.|+||..+|+..-.+
T Consensus        43 Gik~l~~~Gi~vAIITGr~s-~ive~Ra~~LGI~~~~q--G~--~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~  117 (170)
T COG1778          43 GIKLLLKSGIKVAIITGRDS-PIVEKRAKDLGIKHLYQ--GI--SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK  117 (170)
T ss_pred             HHHHHHHcCCeEEEEeCCCC-HHHHHHHHHcCCceeee--ch--HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence            47889999999999999999 78999999999988887  33  456666999999999999999999999999999999


Q ss_pred             CCCeEE
Q psy8911         100 LGVTCI  105 (280)
Q Consensus       100 ~G~~~i  105 (280)
                      .|....
T Consensus       118 vGls~a  123 (170)
T COG1778         118 VGLSVA  123 (170)
T ss_pred             cCCccc
Confidence            998765

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.22  E-value=2.7e-06  Score=73.94  Aligned_cols=63  Identities=19%  Similarity=0.151  Sum_probs=53.5

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      |.+++.+|+||||++.                    .  -...+++.+.|+.|+++|++++++|++ ....+...++.++
T Consensus         3 ~~kli~~DlDGTLl~~--------------------~--~~~~~~~~~ai~~l~~~Gi~~~iaTgR-~~~~~~~~~~~l~   59 (273)
T PRK00192          3 MKLLVFTDLDGTLLDH--------------------H--TYSYEPAKPALKALKEKGIPVIPCTSK-TAAEVEVLRKELG   59 (273)
T ss_pred             cceEEEEcCcccCcCC--------------------C--CcCcHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcC
Confidence            5789999999999852                    1  124578999999999999999999999 8888889999999


Q ss_pred             Cccccc
Q psy8911         205 LNQYFS  210 (280)
Q Consensus       205 l~~~f~  210 (280)
                      +..+|-
T Consensus        60 l~~~~i   65 (273)
T PRK00192         60 LEDPFI   65 (273)
T ss_pred             CCCCEE
Confidence            987664

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.22  E-value=4.7e-06  Score=71.78  Aligned_cols=86  Identities=19%  Similarity=0.206  Sum_probs=64.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCch--HHHHHHHhhcCccccccccceec----CCChhHHHHHHHHhCCCCc
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI--QGAQQLLDLFNWNQYFDHKQIFP----GQKTTHFANLKKATGIEYK   82 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--~~~~~~l~~~~l~~~fd~~~i~~----~~~~~~~~~~~~~~g~~p~   82 (280)
                      ....++||+.++|+.|+++|++++++||.+..  +.....|+.+|+..++.. .++.    +.+...++.+.+.+++   
T Consensus       115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-~lllr~~~~~K~~rr~~I~~~y~I---  190 (266)
T TIGR01533       115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-HLLLKKDKSSKESRRQKVQKDYEI---  190 (266)
T ss_pred             CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-eEEeCCCCCCcHHHHHHHHhcCCE---
Confidence            35678999999999999999999999998851  234467888898765432 3332    2344458888887777   


Q ss_pred             cEEEEeCCccccccccc
Q psy8911          83 DMVFFDDEERNSHDVSP   99 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~   99 (280)
                       +++|||+..|+.+...
T Consensus       191 -vl~vGD~~~Df~~~~~  206 (266)
T TIGR01533       191 -VLLFGDNLLDFDDFFY  206 (266)
T ss_pred             -EEEECCCHHHhhhhhc
Confidence             9999999999865443

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=98.21  E-value=4e-06  Score=77.22  Aligned_cols=102  Identities=16%  Similarity=0.278  Sum_probs=72.4

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc---------CccccccccceecC-CChh---------
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF---------NWNQYFDHKQIFPG-QKTT---------   68 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~---------~l~~~fd~~~i~~~-~~~~---------   68 (280)
                      ...+..-|.+..+|+.||++|.++.++||++. +.+...++.+         .|.+|||  .|+.+ .|+.         
T Consensus       179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~-~yt~~~M~yl~g~~~~~~~dW~dlFD--vVIv~A~KP~FF~~~~pfr  255 (448)
T PF05761_consen  179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPF-DYTNAVMSYLLGPFLGEDPDWRDLFD--VVIVDARKPGFFTEGRPFR  255 (448)
T ss_dssp             CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-H-HHHHHHHHHHCGCCSSTTT-GGGCEC--EEEES--CCHHHCT---EE
T ss_pred             HHHccCCchHHHHHHHHHhcCceEEEecCCCC-chhhhhhhhccCCCCCCCCChhhhee--EEEEcCCCCcccCCCCceE
Confidence            34566678999999999999999999999999 8988887775         4889999  44432 1211         


Q ss_pred             ---------------------------HHHHHHHHhCCCCccEEEEeCCcc-ccccccc-CCCeEEEEcCCCc
Q psy8911          69 ---------------------------HFANLKKATGIEYKDMVFFDDEER-NSHDVSP-LGVTCILVEDGMT  112 (280)
Q Consensus        69 ---------------------------~~~~~~~~~g~~p~~~l~v~D~~~-~i~aa~~-~G~~~i~v~~~~~  112 (280)
                                                 ....+.+-+|...++++||||+.. ||..+++ .||+|++|-+...
T Consensus       256 ~vd~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe  328 (448)
T PF05761_consen  256 EVDTETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELE  328 (448)
T ss_dssp             EEETTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHH
T ss_pred             EEECCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhh
Confidence                                       177888889999999999999964 7766666 5999999966543

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=98.21  E-value=2.7e-06  Score=69.49  Aligned_cols=84  Identities=18%  Similarity=0.256  Sum_probs=65.0

Q ss_pred             cCCCHH----HHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccc-cceEec-----------C--C--CHHHHHH
Q psy8911         166 YYRGVP----EILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS-NKEIYP-----------G--P--KTTHFES  225 (280)
Q Consensus       166 ~~~g~~----~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~-~~~~~~-----------~--~--k~~~~~~  225 (280)
                      ++|++.    ++|+.++++|+++.|+|++ ....++.+++.+|+...+- ......           +  .  |...+..
T Consensus        86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~-~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~  164 (192)
T PF12710_consen   86 LFPGFIPDAMELIRELKDNGIKVVIVSGS-PDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKE  164 (192)
T ss_dssp             HCTTCHTTHHHHHHHHHHTTSEEEEEEEE-EHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHH
T ss_pred             cCcCchhhHHHHHHHHHHCCCEEEEECCC-cHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHH
Confidence            456666    9999999999999999999 9999999999999986432 111111           0  1  5566666


Q ss_pred             H---HHHcCCCCCcEEEEeCCcCCccccc
Q psy8911         226 L---KKATGIEYKDMVFFDDEERNSHDVS  251 (280)
Q Consensus       226 ~---~~~~~~~~~~~l~igD~~~di~~a~  251 (280)
                      +   ... +.++..+++|||+.+|+..++
T Consensus       165 ~~~~~~~-~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  165 LYIRDEE-DIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred             HHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence            6   445 899999999999999987653

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=98.21  E-value=1.5e-05  Score=59.94  Aligned_cols=100  Identities=10%  Similarity=0.104  Sum_probs=81.2

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDD  242 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD  242 (280)
                      ..++|+.+.+.|++|++. +.++|+|+- ....+...++-.|+.-+-    ++....++.=..+++.++-+.+.++||||
T Consensus        28 gGklf~ev~e~iqeL~d~-V~i~IASgD-r~gsl~~lae~~gi~~~r----v~a~a~~e~K~~ii~eLkk~~~k~vmVGn  101 (152)
T COG4087          28 GGKLFSEVSETIQELHDM-VDIYIASGD-RKGSLVQLAEFVGIPVER----VFAGADPEMKAKIIRELKKRYEKVVMVGN  101 (152)
T ss_pred             CcEEcHhhHHHHHHHHHh-heEEEecCC-cchHHHHHHHHcCCceee----eecccCHHHHHHHHHHhcCCCcEEEEecC
Confidence            357999999999999999 999999998 888888899999976432    22346666667788888888899999999


Q ss_pred             CcCCcccccccCceEEEECCCCCHHH
Q psy8911         243 EERNSHDVSPLGVTCIHVKKGMSHAV  268 (280)
Q Consensus       243 ~~~di~~a~~aG~~~i~v~~g~~~~~  268 (280)
                      ..+|+.+-++|.+-.+.+..+..+..
T Consensus       102 GaND~laLr~ADlGI~tiq~e~v~~r  127 (152)
T COG4087         102 GANDILALREADLGICTIQQEGVPER  127 (152)
T ss_pred             CcchHHHhhhcccceEEeccCCcchH
Confidence            99999999998777777765444433

>KOG2630|consensus

Probab=98.19  E-value=5.4e-06  Score=68.26  Aligned_cols=98  Identities=22%  Similarity=0.285  Sum_probs=78.5

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcC--------ccccccccceecCCCh--hHHHHHHHH
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFN--------WNQYFDHKQIFPGQKT--THFANLKKA   76 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~--------l~~~fd~~~i~~~~~~--~~~~~~~~~   76 (280)
                      ....-..|+++...++..+..|++++|.|+++. . +++++-...        +.+|||  . -.+.++  ..|..+.+.
T Consensus       118 g~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv-~-AqKllfg~s~~gdl~~y~~gyfD--t-~iG~K~e~~sy~~I~~~  192 (254)
T KOG2630|consen  118 GELKAHVYADVLPAIERWSGEGVRVYIYSSGSV-A-AQKLLFGYSDAGDLRKYISGYFD--T-TIGLKVESQSYKKIGHL  192 (254)
T ss_pred             ccccccccchhHHHHHHHhhcCceEEEEcCCcH-H-HHHHHHcccCcchHHHHhhhhhh--c-cccceehhHHHHHHHHH
Confidence            334447899999999999999999999999999 4 455444332        336677  3 233333  449999999


Q ss_pred             hCCCCccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          77 TGIEYKDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        77 ~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      +|.+|.|++|+-|.+....||+.+|+++.++..
T Consensus       193 Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~r  225 (254)
T KOG2630|consen  193 IGKSPREILFLTDVPREAAAARKAGLQAGLVSR  225 (254)
T ss_pred             hCCChhheEEeccChHHHHHHHhcccceeeeec
Confidence            999999999999999999999999999988844

>smart00775 LNS2 LNS2 domain

Probab=98.17  E-value=1.2e-05  Score=63.99  Aligned_cols=117  Identities=18%  Similarity=0.156  Sum_probs=69.6

Q ss_pred             EEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHH---HHHHhh---
Q psy8911         129 LSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHA---KQILNL---  202 (280)
Q Consensus       129 ~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~---~~~l~~---  202 (280)
                      +++|+||||.++......          ....+.. ...|++.+++++++++|+++.++|+. +...+   +..++.   
T Consensus         2 VisDIDGTL~~sd~~~~~----------~~~~~~~-~~~~~~~~a~~~l~~~G~~ivy~TGR-p~~~~~~t~~~l~~~~~   69 (157)
T smart00775        2 VISDIDGTITKSDVLGHV----------VPIIGKD-WTHPGVAKLYRDIQNNGYKILYLTAR-PIGQADRTRSYLSQIKQ   69 (157)
T ss_pred             EEEecCCCCccccccccc----------ccccccC-cCCHHHHHHHHHHHHcCCeEEEEcCC-cHHHHHHHHHHHHHhhh
Confidence            689999999976543322          1111111 35699999999999999999999999 65554   355655   


Q ss_pred             --CCCcc--cccc--ce--------EecCC---CHHHHHHHHHHcCCCCCcEE-EEeCCcCCcccccccCceE
Q psy8911         203 --INLNQ--YFSN--KE--------IYPGP---KTTHFESLKKATGIEYKDMV-FFDDEERNSHDVSPLGVTC  257 (280)
Q Consensus       203 --~gl~~--~f~~--~~--------~~~~~---k~~~~~~~~~~~~~~~~~~l-~igD~~~di~~a~~aG~~~  257 (280)
                        .++..  .+-.  ..        +...+   |.+.+..+.+.+.-.--..+ -+||+..|+++=+++|++.
T Consensus        70 ~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~  142 (157)
T smart00775       70 DGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP  142 (157)
T ss_pred             ccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence              23331  1110  00        11112   22334444443321122333 4789999999999999753

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=98.09  E-value=5.3e-06  Score=71.80  Aligned_cols=90  Identities=17%  Similarity=0.225  Sum_probs=63.6

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCch----HHHHHHHhhcCccc---cccccceecC--CChhHHHHHHHHhCCCCcc
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEI----QGAQQLLDLFNWNQ---YFDHKQIFPG--QKTTHFANLKKATGIEYKD   83 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~----~~~~~~l~~~~l~~---~fd~~~i~~~--~~~~~~~~~~~~~g~~p~~   83 (280)
                      .++++.++++.++..+..+.++++.+..    ...+.+.+.+++.-   .++...+...  +|...++.+++.+|+++++
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e  217 (272)
T PRK10530        138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKN  217 (272)
T ss_pred             ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHH
Confidence            3567788888888888888888876531    23444555555441   1121123322  3444599999999999999


Q ss_pred             EEEEeCCcccccccccCCC
Q psy8911          84 MVFFDDEERNSHDVSPLGV  102 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~  102 (280)
                      |++|||+.+|+++++.+|+
T Consensus       218 ~i~~GD~~NDi~m~~~ag~  236 (272)
T PRK10530        218 VVAFGDNFNDISMLEAAGL  236 (272)
T ss_pred             eEEeCCChhhHHHHHhcCc
Confidence            9999999999999999997

>TIGR01684 viral_ppase viral phosphatase

Probab=98.07  E-value=7.4e-06  Score=70.74  Aligned_cols=56  Identities=20%  Similarity=0.367  Sum_probs=50.8

Q ss_pred             Ccceec-CCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh
Q psy8911           9 AHIKYY-PDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT   67 (280)
Q Consensus         9 ~~~~~~-~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~   67 (280)
                      +.+++. ||+.++|++|+++|++++|+||+++ +.++..++.+|+..||+  .|++++.+
T Consensus       142 ~~v~irdPgV~EaL~~LkekGikLaIaTS~~R-e~v~~~L~~lGLd~YFd--vIIs~Gdv  198 (301)
T TIGR01684       142 EPVRIRDPRIYDSLTELKKRGCILVLWSYGDR-DHVVESMRKVKLDRYFD--IIISGGHK  198 (301)
T ss_pred             CccccCCHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHHcCCCcccC--EEEECCcc
Confidence            346666 9999999999999999999999999 89999999999999999  88887766

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.06  E-value=9e-06  Score=70.32  Aligned_cols=61  Identities=16%  Similarity=0.166  Sum_probs=51.0

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      +++.+|+||||++...                      ..++.+.+.|++|+++|++++++|++ ....+....+.+++.
T Consensus         2 KLIftDLDGTLLd~~~----------------------~~~~~a~~aL~~Lk~~GI~vVlaTGR-t~~ev~~l~~~Lgl~   58 (302)
T PRK12702          2 RLVLSSLDGSLLDLEF----------------------NSYGAARQALAALERRSIPLVLYSLR-TRAQLEHLCRQLRLE   58 (302)
T ss_pred             cEEEEeCCCCCcCCCC----------------------cCCHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHhCCC
Confidence            6788999999987311                      24466899999999999999999999 888888899999998


Q ss_pred             cccc
Q psy8911         207 QYFS  210 (280)
Q Consensus       207 ~~f~  210 (280)
                      ++|-
T Consensus        59 ~p~I   62 (302)
T PRK12702         59 HPFI   62 (302)
T ss_pred             CeEE
Confidence            6554

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=98.06  E-value=1.5e-05  Score=78.57  Aligned_cols=84  Identities=8%  Similarity=0.026  Sum_probs=67.5

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      +++||+++.|++|+++|++++++|+. ....++.+.+++|+..++..   .+..|+..++.    ++ .++.++||||+.
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd-~~~~a~~ia~~lgi~~~~~~---~p~~K~~~v~~----l~-~~~~v~mvGDgi  638 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGD-NPRAAAAIAGELGIDFRAGL---LPEDKVKAVTE----LN-QHAPLAMVGDGI  638 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCeecCC---CHHHHHHHHHH----Hh-cCCCEEEEECCH
Confidence            68899999999999999999999999 89999999999999755542   22334443333    33 346899999999


Q ss_pred             CCcccccccCceE
Q psy8911         245 RNSHDVSPLGVTC  257 (280)
Q Consensus       245 ~di~~a~~aG~~~  257 (280)
                      +|..+.++|++-.
T Consensus       639 NDapAl~~A~vgi  651 (741)
T PRK11033        639 NDAPAMKAASIGI  651 (741)
T ss_pred             HhHHHHHhCCeeE
Confidence            9999999998543

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.05  E-value=1.5e-05  Score=80.15  Aligned_cols=90  Identities=11%  Similarity=0.089  Sum_probs=72.0

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc---------------------ceecCCChhHH
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK---------------------QIFPGQKTTHF   70 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~---------------------~i~~~~~~~~~   70 (280)
                      +++||+.+.|+.|+++|+++.++|+.+. ..++.+.+.+|+...++..                     .+++...+..-
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~-~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K  606 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQ-ETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK  606 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence            7899999999999999999999999999 9999999999998766521                     23333333333


Q ss_pred             HHHHHHhCCCCccEEEEeCCcccccccccCCC
Q psy8911          71 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGV  102 (280)
Q Consensus        71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~  102 (280)
                      ..+.+.++-..+.+.|+||+.+|+.|.++|++
T Consensus       607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdV  638 (884)
T TIGR01522       607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADI  638 (884)
T ss_pred             HHHHHHHHHCCCEEEEECCCcccHHHHHhCCe
Confidence            44444455556899999999999999999995

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=98.05  E-value=9.4e-06  Score=70.43  Aligned_cols=62  Identities=19%  Similarity=0.251  Sum_probs=51.5

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      |.+++.+|+||||++.                    ..  .+-+...+.|++|+++|++++++|++ +...+...++.++
T Consensus         1 m~kli~~DlDGTLl~~--------------------~~--~i~~~~~~ai~~l~~~G~~~~iaTGR-~~~~~~~~~~~l~   57 (272)
T PRK15126          1 MARLAAFDMDGTLLMP--------------------DH--HLGEKTLSTLARLRERDITLTFATGR-HVLEMQHILGALS   57 (272)
T ss_pred             CccEEEEeCCCcCcCC--------------------CC--cCCHHHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHcC
Confidence            4689999999999852                    11  25577899999999999999999999 8888888999999


Q ss_pred             Ccccc
Q psy8911         205 LNQYF  209 (280)
Q Consensus       205 l~~~f  209 (280)
                      +..++
T Consensus        58 ~~~~~   62 (272)
T PRK15126         58 LDAYL   62 (272)
T ss_pred             CCCcE
Confidence            87553

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=98.04  E-value=2.7e-05  Score=67.42  Aligned_cols=42  Identities=14%  Similarity=0.264  Sum_probs=33.1

Q ss_pred             HHHHHHHHcCCCCCcEEEEeCCcCCccccccc---CceEEEECCC
Q psy8911         222 HFESLKKATGIEYKDMVFFDDEERNSHDVSPL---GVTCIHVKKG  263 (280)
Q Consensus       222 ~~~~~~~~~~~~~~~~l~igD~~~di~~a~~a---G~~~i~v~~g  263 (280)
                      .+..+++.++++.+++++|||+.+|+..-+.+   +..+|.|.++
T Consensus       178 al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a  222 (266)
T PRK10187        178 AIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG  222 (266)
T ss_pred             HHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence            36778888899999999999999997776665   4566777544

>PRK10444 UMP phosphatase; Provisional

Probab=98.04  E-value=4e-06  Score=71.84  Aligned_cols=49  Identities=14%  Similarity=0.110  Sum_probs=43.4

Q ss_pred             CChhHHHHHHHHhCCCCccEEEEeCCc-ccccccccCCCeEEEEcCCCch
Q psy8911          65 QKTTHFANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        65 ~~~~~~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      ++...|..++++++++|++|+||||+. .|+.+|+++|+++++|.+|...
T Consensus       175 P~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~  224 (248)
T PRK10444        175 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVST  224 (248)
T ss_pred             CCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCC
Confidence            344459999999999999999999997 7999999999999999887654

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.04  E-value=1.1e-05  Score=69.75  Aligned_cols=57  Identities=23%  Similarity=0.299  Sum_probs=50.3

Q ss_pred             CCcceec-CCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh
Q psy8911           8 GAHIKYY-PDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT   67 (280)
Q Consensus         8 ~~~~~~~-~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~   67 (280)
                      ...+++. |++.++|++|+++|++++|+||++. +.++..++.+++.++|+  .+++++..
T Consensus       143 ~~~v~irdp~V~EtL~eLkekGikLaIvTNg~R-e~v~~~Le~lgL~~yFD--vII~~g~i  200 (303)
T PHA03398        143 EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNR-EHVVHSLKETKLEGYFD--IIICGGRK  200 (303)
T ss_pred             CCccccCChhHHHHHHHHHHCCCEEEEEcCCCh-HHHHHHHHHcCCCcccc--EEEECCCc
Confidence            3445666 9999999999999999999999999 89999999999999999  77777654

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=98.03  E-value=2e-05  Score=72.73  Aligned_cols=100  Identities=13%  Similarity=0.172  Sum_probs=70.5

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---------CCccccccceEecC----------------
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---------NLNQYFSNKEIYPG----------------  217 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---------gl~~~f~~~~~~~~----------------  217 (280)
                      -+..-|.+..+|+.|+++|.++.++||+ .-.+++..++.+         .+.+|||.+++...                
T Consensus       181 Yi~k~~~l~~~L~~lr~~GKklFLiTNS-~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~  259 (448)
T PF05761_consen  181 YIHKDPKLPPWLERLRSAGKKLFLITNS-PFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDT  259 (448)
T ss_dssp             CEE--CHHHHHHHHHHCCT-EEEEE-SS--HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEET
T ss_pred             HccCCchHHHHHHHHHhcCceEEEecCC-CCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEEC
Confidence            3455688999999999999999999999 899999888875         35689996543211                


Q ss_pred             -------CC------H------HHHHHHHHHcCCCCCcEEEEeCCcC-Ccccccc-cCceEEEECCC
Q psy8911         218 -------PK------T------THFESLKKATGIEYKDMVFFDDEER-NSHDVSP-LGVTCIHVKKG  263 (280)
Q Consensus       218 -------~k------~------~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~~-aG~~~i~v~~g  263 (280)
                             .+      +      .....+.+.+|....+++||||... ||..+++ .|++|++|-..
T Consensus       260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E  326 (448)
T PF05761_consen  260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE  326 (448)
T ss_dssp             TTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred             CCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence                   01      0      2267888889999999999999998 8888887 59999999544

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PRK11590 hypothetical protein; Provisional

Probab=98.02  E-value=1.9e-05  Score=65.99  Aligned_cols=91  Identities=13%  Similarity=0.116  Sum_probs=69.6

Q ss_pred             ceecCCHHHHH-HHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC---------------CChhHHHHHH
Q psy8911          11 IKYYPDVPGIL-KYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG---------------QKTTHFANLK   74 (280)
Q Consensus        11 ~~~~~g~~~~l-~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~---------------~~~~~~~~~~   74 (280)
                      +.+|||+.++| +.|+++|++++|+||++. ..++.+++.+++.. .+  .+++.               ...++...+.
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~-~~~~~il~~l~~~~-~~--~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~  169 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQ-PLVEQVYFDTPWLP-RV--NLIASQMQRRYGGWVLTLRCLGHEKVAQLE  169 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcH-HHHHHHHHHccccc-cC--ceEEEEEEEEEccEECCccCCChHHHHHHH
Confidence            57799999999 679999999999999999 89999999988633 22  11111               1122366666


Q ss_pred             HHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          75 KATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        75 ~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      +.+|.+...+.+-|||.+|+..-..+|-..+
T Consensus       170 ~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~  200 (211)
T PRK11590        170 RKIGTPLRLYSGYSDSKQDNPLLYFCQHRWR  200 (211)
T ss_pred             HHhCCCcceEEEecCCcccHHHHHhCCCCEE
Confidence            6778888899999999999888777776544

>PRK10976 putative hydrolase; Provisional

Probab=97.99  E-value=1.5e-05  Score=68.90  Aligned_cols=60  Identities=18%  Similarity=0.171  Sum_probs=49.9

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      .+++.+|+||||++.                    ..  .+-+...+.|++|+++|++++++|+. ....+...++.+++
T Consensus         2 ikli~~DlDGTLl~~--------------------~~--~is~~~~~ai~~l~~~G~~~~iaTGR-~~~~~~~~~~~l~~   58 (266)
T PRK10976          2 YQVVASDLDGTLLSP--------------------DH--TLSPYAKETLKLLTARGIHFVFATGR-HHVDVGQIRDNLEI   58 (266)
T ss_pred             ceEEEEeCCCCCcCC--------------------CC--cCCHHHHHHHHHHHHCCCEEEEEcCC-ChHHHHHHHHhcCC
Confidence            578999999999862                    11  24467899999999999999999999 78778888899998


Q ss_pred             ccc
Q psy8911         206 NQY  208 (280)
Q Consensus       206 ~~~  208 (280)
                      ..+
T Consensus        59 ~~~   61 (266)
T PRK10976         59 KSY   61 (266)
T ss_pred             CCe
Confidence            754

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=97.97  E-value=5.9e-06  Score=70.31  Aligned_cols=47  Identities=13%  Similarity=0.115  Sum_probs=41.5

Q ss_pred             CCChhHHHHHHHHhCCCCccE-EEEeCCc-ccccccccCCCeEEEEcCC
Q psy8911          64 GQKTTHFANLKKATGIEYKDM-VFFDDEE-RNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        64 ~~~~~~~~~~~~~~g~~p~~~-l~v~D~~-~~i~aa~~~G~~~i~v~~~  110 (280)
                      .++...|+.++++++++|+++ +||||+. .||.+|+++|+++++|.+|
T Consensus       188 KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       188 KPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             CCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence            345556999999999999998 9999998 7999999999999999654

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=97.96  E-value=1.8e-05  Score=66.77  Aligned_cols=58  Identities=21%  Similarity=0.122  Sum_probs=47.7

Q ss_pred             eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc
Q psy8911         128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ  207 (280)
Q Consensus       128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~  207 (280)
                      ++.||+||||++.                    .   ...+.+.+.|++|+++|++++++|++ .+..+...++.+|+.+
T Consensus         1 li~~DlDGTLl~~--------------------~---~~~~~~~~ai~~l~~~G~~~vi~TgR-~~~~~~~~~~~lg~~~   56 (225)
T TIGR02461         1 VIFTDLDGTLLPP--------------------G---YEPGPAREALEELKDLGFPIVFVSSK-TRAEQEYYREELGVEP   56 (225)
T ss_pred             CEEEeCCCCCcCC--------------------C---CCchHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHcCCCC
Confidence            3689999999851                    1   13467999999999999999999999 7777888899999865


Q ss_pred             cc
Q psy8911         208 YF  209 (280)
Q Consensus       208 ~f  209 (280)
                      +|
T Consensus        57 ~~   58 (225)
T TIGR02461        57 PF   58 (225)
T ss_pred             cE
Confidence            43

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.94  E-value=1.8e-05  Score=67.00  Aligned_cols=131  Identities=11%  Similarity=0.037  Sum_probs=78.7

Q ss_pred             cceeEEEecCCCCCCcccccc--c---CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH---H
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDL--V---APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEIL---H  195 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~--~---~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~---~  195 (280)
                      .+..++||+|+|+++......  .   ..+.... .... ..+ ..++.||+.++++.++++|++++++||. ...   .
T Consensus        71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv-~~~-~~~aip~a~~l~~~~~~~G~~V~~iT~R-~~~~r~~  147 (229)
T PF03767_consen   71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWV-ASG-KAPAIPGALELYNYARSRGVKVFFITGR-PESQREA  147 (229)
T ss_dssp             SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHH-HCT-GGEEETTHHHHHHHHHHTTEEEEEEEEE-ETTCHHH
T ss_pred             CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHH-hcc-cCcccHHHHHHHHHHHHCCCeEEEEecC-CchhHHH
Confidence            356899999999986422210  0   0110000 0111 112 2378899999999999999999999998 433   5


Q ss_pred             HHHHHhhCCCccccccceEecCC---------CHHHHHHHHHH-cCCCCCcEEEEeCCcCCccccccc---CceEEEECC
Q psy8911         196 AKQILNLINLNQYFSNKEIYPGP---------KTTHFESLKKA-TGIEYKDMVFFDDEERNSHDVSPL---GVTCIHVKK  262 (280)
Q Consensus       196 ~~~~l~~~gl~~~f~~~~~~~~~---------k~~~~~~~~~~-~~~~~~~~l~igD~~~di~~a~~a---G~~~i~v~~  262 (280)
                      ...-|+..|+..+-..+.-..++         |.+....+.++ +.+    +.+|||...|+..++..   |.+.+..|+
T Consensus       148 T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I----i~~iGD~~~D~~~~~~~~~~~~r~f~lPN  223 (229)
T PF03767_consen  148 TEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI----IANIGDQLSDFSGAKTAGARAERWFKLPN  223 (229)
T ss_dssp             HHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE----EEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred             HHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE----EEEeCCCHHHhhcccccccccceEEEcCC
Confidence            56678888866432222122222         23334444444 333    67899999999995543   456666664

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=97.94  E-value=1.7e-05  Score=68.27  Aligned_cols=63  Identities=17%  Similarity=0.033  Sum_probs=46.9

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH--HHHHHHhh-
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEIL--HAKQILNL-  202 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~--~~~~~l~~-  202 (280)
                      .+.+.||+||||+.                       ...++||+.+.|+.|+++|+++.++||++.+.  .....|+. 
T Consensus         8 y~~~l~DlDGvl~~-----------------------G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~   64 (269)
T COG0647           8 YDGFLFDLDGVLYR-----------------------GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSL   64 (269)
T ss_pred             cCEEEEcCcCceEe-----------------------CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhh
Confidence            46789999999974                       24689999999999999999999999993322  23345555 


Q ss_pred             CCCcccccc
Q psy8911         203 INLNQYFSN  211 (280)
Q Consensus       203 ~gl~~~f~~  211 (280)
                      .+++.-.+.
T Consensus        65 ~~~~~~~~~   73 (269)
T COG0647          65 GGVDVTPDD   73 (269)
T ss_pred             cCCCCCHHH
Confidence            555444443

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=97.93  E-value=1.3e-05  Score=65.45  Aligned_cols=84  Identities=14%  Similarity=0.256  Sum_probs=61.6

Q ss_pred             ecCCHH----HHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccc-cccee-----------cCC----ChhHHHH
Q psy8911          13 YYPDVP----GILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD-HKQIF-----------PGQ----KTTHFAN   72 (280)
Q Consensus        13 ~~~g~~----~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd-~~~i~-----------~~~----~~~~~~~   72 (280)
                      ++|++.    ++|+.++++|++++|+|.++. ..++.+++.+++...+- ...+.           .+.    |....+.
T Consensus        86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~-~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~  164 (192)
T PF12710_consen   86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPD-EIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKE  164 (192)
T ss_dssp             HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEH-HHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHH
T ss_pred             cCcCchhhHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHH
Confidence            455555    999999999999999999999 99999999999875321 00111           111    3333555


Q ss_pred             H---HHHhCCCCccEEEEeCCcccccccc
Q psy8911          73 L---KKATGIEYKDMVFFDDEERNSHDVS   98 (280)
Q Consensus        73 ~---~~~~g~~p~~~l~v~D~~~~i~aa~   98 (280)
                      +   ... +..+..+++|||+.+|+.+++
T Consensus       165 ~~~~~~~-~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  165 LYIRDEE-DIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred             HHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence            5   344 899999999999999987653

>PRK11590 hypothetical protein; Provisional

Probab=97.92  E-value=9.3e-05  Score=61.81  Aligned_cols=95  Identities=12%  Similarity=0.059  Sum_probs=68.6

Q ss_pred             eccCCCHHHHH-HHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC---cccccc-ce-Eec----CCC---HHHHHHHHHHc
Q psy8911         164 IKYYRGVPEIL-RYLKENKCLVAAASRTSEILHAKQILNLINL---NQYFSN-KE-IYP----GPK---TTHFESLKKAT  230 (280)
Q Consensus       164 ~~~~~g~~~~L-~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl---~~~f~~-~~-~~~----~~k---~~~~~~~~~~~  230 (280)
                      +.+|||+.++| +.|+++|++++|+||+ ....++.+++.+|+   .+.+-. .. .+.    ++.   .+-...+-+.+
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas-~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~  172 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGS-PQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKI  172 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCC-cHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHh
Confidence            46799999999 6789999999999999 88899999999996   332211 00 111    111   23344444455


Q ss_pred             CCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         231 GIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       231 ~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      +.+...+.+.|||.+|+.-...+|-+.+.
T Consensus       173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~~~v  201 (211)
T PRK11590        173 GTPLRLYSGYSDSKQDNPLLYFCQHRWRV  201 (211)
T ss_pred             CCCcceEEEecCCcccHHHHHhCCCCEEE
Confidence            77788889999999998888888876444

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.90  E-value=2.5e-05  Score=65.53  Aligned_cols=79  Identities=13%  Similarity=0.017  Sum_probs=57.6

Q ss_pred             hCCcEEEE-EcCCCcHHHHHHHHhhCCCc----cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccccccc
Q psy8911         179 ENKCLVAA-ASRTSEILHAKQILNLINLN----QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPL  253 (280)
Q Consensus       179 ~~g~~~~i-~T~~~~~~~~~~~l~~~gl~----~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~a  253 (280)
                      ..++.+.+ .++. ....+...+++.++.    .+|..+......|...+..+++++|++++++++|||+.+|+...+.+
T Consensus       136 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~a  214 (221)
T TIGR02463       136 EASVPLLWRDSDS-RMPRFTALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVA  214 (221)
T ss_pred             cCCccEEecCchh-HHHHHHHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhC
Confidence            34455555 4555 555666677777765    44443222223677889999999999999999999999999999999


Q ss_pred             CceEE
Q psy8911         254 GVTCI  258 (280)
Q Consensus       254 G~~~i  258 (280)
                      |..++
T Consensus       215 g~~va  219 (221)
T TIGR02463       215 DYAVV  219 (221)
T ss_pred             CceEE
Confidence            97754

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.89  E-value=3.5e-05  Score=66.72  Aligned_cols=59  Identities=12%  Similarity=0.094  Sum_probs=49.3

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      .+++.+|+||||++.                    ..  .+-+...+.|++|+++|++++++|++ +...+...++.+++
T Consensus         3 ~kli~~DlDGTLl~~--------------------~~--~i~~~~~~ai~~l~~~G~~~~iaTGR-~~~~~~~~~~~l~~   59 (270)
T PRK10513          3 IKLIAIDMDGTLLLP--------------------DH--TISPAVKQAIAAARAKGVNVVLTTGR-PYAGVHRYLKELHM   59 (270)
T ss_pred             eEEEEEecCCcCcCC--------------------CC--ccCHHHHHHHHHHHHCCCEEEEecCC-ChHHHHHHHHHhCC
Confidence            578999999999852                    11  24477899999999999999999999 78888889999998


Q ss_pred             cc
Q psy8911         206 NQ  207 (280)
Q Consensus       206 ~~  207 (280)
                      ..
T Consensus        60 ~~   61 (270)
T PRK10513         60 EQ   61 (270)
T ss_pred             CC
Confidence            63

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.87  E-value=3.3e-05  Score=66.66  Aligned_cols=60  Identities=23%  Similarity=0.192  Sum_probs=51.3

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      +.+++.+|+||||++.                    ...  .-+.+.+.|++++++|++++++|++ +...+...++.++
T Consensus         2 ~~kli~~DlDGTLl~~--------------------~~~--i~~~~~~al~~~~~~g~~v~iaTGR-~~~~~~~~~~~l~   58 (264)
T COG0561           2 MIKLLAFDLDGTLLDS--------------------NKT--ISPETKEALARLREKGVKVVLATGR-PLPDVLSILEELG   58 (264)
T ss_pred             CeeEEEEcCCCCccCC--------------------CCc--cCHHHHHHHHHHHHCCCEEEEECCC-ChHHHHHHHHHcC
Confidence            4578999999999852                    222  5588999999999999999999999 8888999999999


Q ss_pred             Ccc
Q psy8911         205 LNQ  207 (280)
Q Consensus       205 l~~  207 (280)
                      +..
T Consensus        59 ~~~   61 (264)
T COG0561          59 LDG   61 (264)
T ss_pred             CCc
Confidence            874

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.84  E-value=3e-05  Score=76.51  Aligned_cols=84  Identities=8%  Similarity=0.062  Sum_probs=66.7

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCC
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDE   90 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~   90 (280)
                      -+++||+.+.|+.|+++|++++++|+.+. ..++.+.+.+|+..++.   ....+|..    +.++++ .+..++||||+
T Consensus       567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~-~~a~~ia~~lgi~~~~~---~~p~~K~~----~v~~l~-~~~~v~mvGDg  637 (741)
T PRK11033        567 DTLRADARQAISELKALGIKGVMLTGDNP-RAAAAIAGELGIDFRAG---LLPEDKVK----AVTELN-QHAPLAMVGDG  637 (741)
T ss_pred             cCCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCeecC---CCHHHHHH----HHHHHh-cCCCEEEEECC
Confidence            37899999999999999999999999999 99999999999965444   22222222    333343 34689999999


Q ss_pred             cccccccccCCCe
Q psy8911          91 ERNSHDVSPLGVT  103 (280)
Q Consensus        91 ~~~i~aa~~~G~~  103 (280)
                      .+|..+.+++++-
T Consensus       638 iNDapAl~~A~vg  650 (741)
T PRK11033        638 INDAPAMKAASIG  650 (741)
T ss_pred             HHhHHHHHhCCee
Confidence            9999999999943

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.84  E-value=6.5e-05  Score=64.13  Aligned_cols=109  Identities=23%  Similarity=0.212  Sum_probs=82.6

Q ss_pred             ccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHH
Q psy8911         118 YGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAK  197 (280)
Q Consensus       118 ~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~  197 (280)
                      .....|..|..+.||+|.||+.....                   .-..-|.+.+-|..|+++|..+++=|-+ .++++.
T Consensus       114 ~~~~~~~~phVIVfDlD~TLItd~~~-------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG-~~eHV~  173 (297)
T PF05152_consen  114 EESLVWEPPHVIVFDLDSTLITDEGD-------------------VRIRDPAVYDSLRELKEQGCVLVLWSYG-NREHVR  173 (297)
T ss_pred             hhhccCCCCcEEEEECCCcccccCCc-------------------cccCChHHHHHHHHHHHcCCEEEEecCC-CHHHHH
Confidence            34456778899999999999852111                   1124688999999999999999999999 999999


Q ss_pred             HHHhhCCCccccccceEecC----------------------------------CC-HHHHHHHHHHcCCCCCcEE-EEe
Q psy8911         198 QILNLINLNQYFSNKEIYPG----------------------------------PK-TTHFESLKKATGIEYKDMV-FFD  241 (280)
Q Consensus       198 ~~l~~~gl~~~f~~~~~~~~----------------------------------~k-~~~~~~~~~~~~~~~~~~l-~ig  241 (280)
                      ..++.++|.+||+.+.+.+.                                  || |......+++.|+..=.++ .|+
T Consensus       174 ~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVD  253 (297)
T PF05152_consen  174 HSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVD  253 (297)
T ss_pred             HHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHHHcCCceeeeEEEec
Confidence            99999999999996533210                                  23 3447888888898866655 677


Q ss_pred             CCcCC
Q psy8911         242 DEERN  246 (280)
Q Consensus       242 D~~~d  246 (280)
                      |=..+
T Consensus       254 DL~~N  258 (297)
T PF05152_consen  254 DLKSN  258 (297)
T ss_pred             cCccc
Confidence            76654

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=97.83  E-value=3.1e-05  Score=61.76  Aligned_cols=96  Identities=15%  Similarity=0.222  Sum_probs=60.8

Q ss_pred             CCcceec-CCHHHHHHHHHHCCceEEEecCCCch-------------HHHHHHHhhcCcccc--ccc-cceecCCChhHH
Q psy8911           8 GAHIKYY-PDVPGILKYLKQNNCLVAAASRTSEI-------------QGAQQLLDLFNWNQY--FDH-KQIFPGQKTTHF   70 (280)
Q Consensus         8 ~~~~~~~-~g~~~~l~~L~~~g~~~~i~Sn~~~~-------------~~~~~~l~~~~l~~~--fd~-~~i~~~~~~~~~   70 (280)
                      .....++ |++.+.|++|.++||.++|+||...-             ...+.+++.+++--.  +.. ...+..+..+++
T Consensus        24 ~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~  103 (159)
T PF08645_consen   24 PDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMW  103 (159)
T ss_dssp             TCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHH
T ss_pred             HHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHH
Confidence            3446665 58999999999999999999998431             223345555554311  000 001122446679


Q ss_pred             HHHHHHhC----CCCccEEEEeCC-----------cccccccccCCCe
Q psy8911          71 ANLKKATG----IEYKDMVFFDDE-----------ERNSHDVSPLGVT  103 (280)
Q Consensus        71 ~~~~~~~g----~~p~~~l~v~D~-----------~~~i~aa~~~G~~  103 (280)
                      ..+++.++    ++.++++||||+           ..|.+-|.++|++
T Consensus       104 ~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~  151 (159)
T PF08645_consen  104 EFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIK  151 (159)
T ss_dssp             HHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--
T ss_pred             HHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCc
Confidence            99998876    599999999996           4678888888886

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=97.83  E-value=6.8e-05  Score=62.61  Aligned_cols=95  Identities=13%  Similarity=0.111  Sum_probs=68.4

Q ss_pred             ceecCCHHHHHH-HHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc----ceecCC--------ChhHHHHHHHHh
Q psy8911          11 IKYYPDVPGILK-YLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK----QIFPGQ--------KTTHFANLKKAT   77 (280)
Q Consensus        11 ~~~~~g~~~~l~-~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~----~i~~~~--------~~~~~~~~~~~~   77 (280)
                      +.+|||+.++|+ +|+++|++++|+||++. ..++.+.+..++.+-.+.+    .+..+.        ..++...+.+.+
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~-~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~  171 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQ-PLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKI  171 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcH-HHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHh
Confidence            468999999996 89999999999999999 8899998886653322200    110110        112355566666


Q ss_pred             CCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          78 GIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        78 g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      +.+.+.+.+-|||.+|+..-..+|-..+.
T Consensus       172 ~~~~~~~~aYsDS~~D~pmL~~a~~~~~V  200 (210)
T TIGR01545       172 GSPLKLYSGYSDSKQDNPLLAFCEHRWRV  200 (210)
T ss_pred             CCChhheEEecCCcccHHHHHhCCCcEEE
Confidence            77778889999999998887777765543

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.80  E-value=8.3e-05  Score=62.48  Aligned_cols=132  Identities=10%  Similarity=-0.107  Sum_probs=79.2

Q ss_pred             eeEEEecCCCCCCcccccc----c-CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH---HH
Q psy8911         127 NHLSKKLDYTLWPLHVHDL----V-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---AK  197 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~----~-~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~---~~  197 (280)
                      ..++||+|.|+++......    . .++.... ..-.  .....++.|++.++++.|+++|++++++|+. ....   +.
T Consensus        78 ~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv--~~~~apaip~al~l~~~l~~~G~~Vf~lTGR-~e~~r~~T~  154 (229)
T TIGR01675        78 DAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWL--GKGAAPALPEGLKLYQKIIELGIKIFLLSGR-WEELRNATL  154 (229)
T ss_pred             cEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHH--HcCCCCCCHHHHHHHHHHHHCCCEEEEEcCC-ChHHHHHHH
Confidence            5789999999987543211    0 1111100 0000  1234578999999999999999999999999 6544   66


Q ss_pred             HHHhhCCCccccccceEec--C-CC-HHHHHHHHH-HcCCCCCc-EEEEeCCcCCcccccccCceEEEECCC
Q psy8911         198 QILNLINLNQYFSNKEIYP--G-PK-TTHFESLKK-ATGIEYKD-MVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       198 ~~l~~~gl~~~f~~~~~~~--~-~k-~~~~~~~~~-~~~~~~~~-~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      ..|+..|+..+ +.....+  . .+ ...|..-.+ ++--.-=+ +..|||...|+.. -.+|.+++-.|+.
T Consensus       155 ~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~G-~~~~~RtFKLPNP  224 (229)
T TIGR01675       155 DNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLG-SPPGRRTFKLPNP  224 (229)
T ss_pred             HHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhcC-CCccCceeeCCCC
Confidence            77888888765 4333322  1 21 111221111 11111123 3578999999854 4677788777754

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=97.79  E-value=3.8e-05  Score=61.21  Aligned_cols=92  Identities=10%  Similarity=0.094  Sum_probs=67.8

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-----------------ChhH-H
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-----------------KTTH-F   70 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-----------------~~~~-~   70 (280)
                      ..+++-||.++++++++++++++.|+|++-. .....+++...=.+-.+.+.+++..                 ..++ =
T Consensus        70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~-~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK  148 (220)
T COG4359          70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMD-PFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK  148 (220)
T ss_pred             hhcccCccHHHHHHHHHHcCCCEEEEeCCCc-hHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence            4578899999999999999999999999999 7888888887633333322222211                 1111 2


Q ss_pred             HHHHHHhCCCCccEEEEeCCcccccccccCC
Q psy8911          71 ANLKKATGIEYKDMVFFDDEERNSHDVSPLG  101 (280)
Q Consensus        71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G  101 (280)
                      -.+.+.+.-+++.++|.||+.+|+.||+..-
T Consensus       149 ~~vI~~l~e~~e~~fy~GDsvsDlsaaklsD  179 (220)
T COG4359         149 SSVIHELSEPNESIFYCGDSVSDLSAAKLSD  179 (220)
T ss_pred             chhHHHhhcCCceEEEecCCcccccHhhhhh
Confidence            2455666778888999999999999998754

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.78  E-value=0.00011  Score=74.37  Aligned_cols=97  Identities=11%  Similarity=0.098  Sum_probs=73.9

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--------cccc-----------------ceEecCCC
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--------YFSN-----------------KEIYPGPK  219 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--------~f~~-----------------~~~~~~~k  219 (280)
                      ++.|++.+.|+.|++.|+++.++|+. ....+..+.+++|+..        .++.                 ..++....
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD-~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~  615 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGD-NKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE  615 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCC-CHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence            57899999999999999999999999 8899999999999964        2221                 11333333


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         220 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      |+.=.++.+.++-..+.+.|+||+.+|+.+.++|++- +.+.+|
T Consensus       616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g  658 (917)
T TIGR01116       616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSG  658 (917)
T ss_pred             HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCC
Confidence            4333555556666678889999999999999999984 444444

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>KOG3040|consensus

Probab=97.76  E-value=2.8e-05  Score=63.24  Aligned_cols=45  Identities=22%  Similarity=0.381  Sum_probs=40.6

Q ss_pred             hhHHHHHHHHhCCCCccEEEEeCCcc-cccccccCCCeEEEEcCCC
Q psy8911          67 TTHFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        67 ~~~~~~~~~~~g~~p~~~l~v~D~~~-~i~aa~~~G~~~i~v~~~~  111 (280)
                      .-.|..+++.+|++|++|+||||..+ |+-+|.++||+.|.|..|.
T Consensus       184 ~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK  229 (262)
T KOG3040|consen  184 PFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGK  229 (262)
T ss_pred             HHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccc
Confidence            33499999999999999999999876 6999999999999998875

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.76  E-value=5.8e-05  Score=65.53  Aligned_cols=59  Identities=19%  Similarity=0.100  Sum_probs=48.7

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      -++++.+|+||||++.                    ..  ...+...+.|++|+++|++++++|++ +...+...++.+|
T Consensus         6 ~~~lI~~DlDGTLL~~--------------------~~--~i~~~~~~ai~~l~~~Gi~~viaTGR-~~~~i~~~~~~l~   62 (271)
T PRK03669          6 DPLLIFTDLDGTLLDS--------------------HT--YDWQPAAPWLTRLREAQVPVILCSSK-TAAEMLPLQQTLG   62 (271)
T ss_pred             CCeEEEEeCccCCcCC--------------------CC--cCcHHHHHHHHHHHHcCCeEEEEcCC-CHHHHHHHHHHhC
Confidence            3578899999999852                    11  23466889999999999999999999 8888888999998


Q ss_pred             Cc
Q psy8911         205 LN  206 (280)
Q Consensus       205 l~  206 (280)
                      +.
T Consensus        63 ~~   64 (271)
T PRK03669         63 LQ   64 (271)
T ss_pred             CC
Confidence            85

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=97.74  E-value=7.2e-05  Score=64.28  Aligned_cols=58  Identities=24%  Similarity=0.161  Sum_probs=47.6

Q ss_pred             eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc
Q psy8911         128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ  207 (280)
Q Consensus       128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~  207 (280)
                      ++.+|+||||++.                    ..  .+-+...+.|++|+++|++++++|+. ....+...++.+++..
T Consensus         1 li~~DlDGTLl~~--------------------~~--~i~~~~~~~i~~l~~~G~~~~iaTGR-~~~~~~~~~~~~~~~~   57 (256)
T TIGR00099         1 LIFIDLDGTLLND--------------------DH--TISPSTKEALAKLREKGIKVVLATGR-PYKEVKNILKELGLDT   57 (256)
T ss_pred             CEEEeCCCCCCCC--------------------CC--ccCHHHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHcCCCC
Confidence            3689999999862                    11  24478899999999999999999999 7888888899988874


Q ss_pred             c
Q psy8911         208 Y  208 (280)
Q Consensus       208 ~  208 (280)
                      +
T Consensus        58 ~   58 (256)
T TIGR00099        58 P   58 (256)
T ss_pred             C
Confidence            3

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=97.71  E-value=0.00023  Score=58.46  Aligned_cols=104  Identities=16%  Similarity=0.125  Sum_probs=69.7

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      ++++.|+|+||+++....               .......-|++.++|+.+.+. |-++|-|.+ ...+++.+++.+++.
T Consensus        22 klLVLDLDeTLvh~~~~~---------------~~~~~~kRP~l~eFL~~~~~~-feIvVwTAa-~~~ya~~~l~~l~~~   84 (195)
T TIGR02245        22 KLLVLDIDYTLFDHRSPA---------------ETGEELMRPYLHEFLTSAYED-YDIVIWSAT-SMKWIEIKMTELGVL   84 (195)
T ss_pred             cEEEEeCCCceEcccccC---------------CCceEEeCCCHHHHHHHHHhC-CEEEEEecC-CHHHHHHHHHHhccc
Confidence            689999999999742111               012245679999999999985 999999999 899999999998764


Q ss_pred             cc--c------ccc---e--Ee-cCCC-HHHHHHHHHHcC--CCCCcEEEEeCCcCCc
Q psy8911         207 QY--F------SNK---E--IY-PGPK-TTHFESLKKATG--IEYKDMVFFDDEERNS  247 (280)
Q Consensus       207 ~~--f------~~~---~--~~-~~~k-~~~~~~~~~~~~--~~~~~~l~igD~~~di  247 (280)
                      ..  +      +.-   .  .. .++. ...+..+-.+++  .+.+++|+|+|++...
T Consensus        85 ~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~  142 (195)
T TIGR02245        85 TNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNF  142 (195)
T ss_pred             CCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHH
Confidence            21  1      100   0  00 0110 111233333443  4889999999999973

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=97.69  E-value=0.0013  Score=56.35  Aligned_cols=42  Identities=24%  Similarity=0.355  Sum_probs=38.3

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      .|...++.++++++++++++++|||+.+|+...+.+|+.++.
T Consensus       188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~  229 (256)
T TIGR00099       188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM  229 (256)
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe
Confidence            677889999999999999999999999999999999987444

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=97.67  E-value=0.0004  Score=57.96  Aligned_cols=95  Identities=14%  Similarity=0.090  Sum_probs=66.6

Q ss_pred             eccCCCHHHHHH-HHhhCCcEEEEEcCCCcHHHHHHHHhhCCC---cccccc-ceEecC-----CC---HHHHHHHHHHc
Q psy8911         164 IKYYRGVPEILR-YLKENKCLVAAASRTSEILHAKQILNLINL---NQYFSN-KEIYPG-----PK---TTHFESLKKAT  230 (280)
Q Consensus       164 ~~~~~g~~~~L~-~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl---~~~f~~-~~~~~~-----~k---~~~~~~~~~~~  230 (280)
                      ..++||+.++|+ +++++|++++|+||+ ....++.+.+..++   .+..-. .++..+     +.   .+-...+-+.+
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas-~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~  171 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGS-PQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKI  171 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCC-cHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHh
Confidence            468999999995 889999999999999 88889988888655   332211 111111     11   12234444444


Q ss_pred             CCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         231 GIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       231 ~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      +.+.+.+.+.|||.+|+.--..+|-+.+.
T Consensus       172 ~~~~~~~~aYsDS~~D~pmL~~a~~~~~V  200 (210)
T TIGR01545       172 GSPLKLYSGYSDSKQDNPLLAFCEHRWRV  200 (210)
T ss_pred             CCChhheEEecCCcccHHHHHhCCCcEEE
Confidence            66777888999999998888888876544

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.65  E-value=0.00025  Score=54.01  Aligned_cols=84  Identities=13%  Similarity=0.030  Sum_probs=53.3

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      ++++||+||||......               .+ ....+.+++.+.|+.|+++|+.+.++|+. ......   ...|. 
T Consensus         2 K~i~~DiDGTL~~~~~~---------------~y-~~~~~~~~~ie~L~~l~~~G~~IiiaTGR-~~~~~~---~n~~~-   60 (126)
T TIGR01689         2 KRLVMDLDNTITLTENG---------------DY-ANVAPILAVIEKLRHYKALGFEIVISSSR-NMRTYE---GNVGK-   60 (126)
T ss_pred             CEEEEeCCCCcccCCCC---------------cc-cccccCHHHHHHHHHHHHCCCEEEEECCC-Cchhhh---ccccc-
Confidence            57899999999742100               00 11347789999999999999999999999 433222   11121 


Q ss_pred             cccccceEecCCCHHHHHHHHHHcCCCCCcEEE
Q psy8911         207 QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVF  239 (280)
Q Consensus       207 ~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~  239 (280)
                        |      ...-.+.....+++.+++..++.|
T Consensus        61 --i------~~~~~~~t~~wL~k~~ipYd~l~~   85 (126)
T TIGR01689        61 --I------NIHTLPIIILWLNQHNVPYDEIYV   85 (126)
T ss_pred             --c------chhhHHHHHHHHHHcCCCCceEEe
Confidence              1      111224456677777887766655

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=97.65  E-value=0.00011  Score=63.31  Aligned_cols=57  Identities=19%  Similarity=0.174  Sum_probs=46.0

Q ss_pred             eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc
Q psy8911         128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ  207 (280)
Q Consensus       128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~  207 (280)
                      ++.+|+||||++..                    .  ...+...+.|+.|+++|++++++|++ ....+...++.+|+.+
T Consensus         1 li~~DlDGTll~~~--------------------~--~~~~~~~~~i~~l~~~g~~~~~~TgR-~~~~~~~~~~~~~~~~   57 (256)
T TIGR01486         1 WIFTDLDGTLLDPH--------------------G--YDWGPAKEVLERLQELGIPVIPCTSK-TAAEVEYLRKELGLED   57 (256)
T ss_pred             CEEEcCCCCCcCCC--------------------C--cCchHHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcCCCC
Confidence            36799999998521                    1  12345899999999999999999999 8888888999998754

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=97.63  E-value=0.00018  Score=57.46  Aligned_cols=92  Identities=13%  Similarity=0.105  Sum_probs=65.6

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC--------------CCHHHH----
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG--------------PKTTHF----  223 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~--------------~k~~~~----  223 (280)
                      ..+++-||.+++.+..+++++++.|+|++ ....+..+++.++=.+..+.+.+++.              ++..+|    
T Consensus        70 k~i~Idp~fKef~e~ike~di~fiVvSsG-m~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK  148 (220)
T COG4359          70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSG-MDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK  148 (220)
T ss_pred             hhcccCccHHHHHHHHHHcCCCEEEEeCC-CchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence            44678899999999999999999999999 77788889988874333322211110              111111    


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcCCcccccccC
Q psy8911         224 ESLKKATGIEYKDMVFFDDEERNSHDVSPLG  254 (280)
Q Consensus       224 ~~~~~~~~~~~~~~l~igD~~~di~~a~~aG  254 (280)
                      -.....+.-+++.++|.||+..|+.+|+...
T Consensus       149 ~~vI~~l~e~~e~~fy~GDsvsDlsaaklsD  179 (220)
T COG4359         149 SSVIHELSEPNESIFYCGDSVSDLSAAKLSD  179 (220)
T ss_pred             chhHHHhhcCCceEEEecCCcccccHhhhhh
Confidence            2334555567788999999999999998743

>KOG1615|consensus

Probab=97.60  E-value=0.0004  Score=56.01  Aligned_cols=87  Identities=20%  Similarity=0.289  Sum_probs=66.9

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc--c------cccccee-----------cCCChhHH
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ--Y------FDHKQIF-----------PGQKTTHF   70 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~--~------fd~~~i~-----------~~~~~~~~   70 (280)
                      ..++-||++|+...|+++|.+++++|.+-. ..+..+-..+|+..  .      ||.-.-+           ++.+....
T Consensus        86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~-~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i  164 (227)
T KOG1615|consen   86 KPTLTPGIRELVSRLHARGTQVYLISGGFR-QLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI  164 (227)
T ss_pred             CCccCCCHHHHHHHHHHcCCeEEEEcCChH-HHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence            567889999999999999999999999999 89999999999864  2      3211111           11222225


Q ss_pred             HHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911          71 ANLKKATGIEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      +.+.+  +.+.+.++||||...|++|..-
T Consensus       165 ~~lrk--~~~~~~~~mvGDGatDlea~~p  191 (227)
T KOG1615|consen  165 ALLRK--NYNYKTIVMVGDGATDLEAMPP  191 (227)
T ss_pred             HHHHh--CCChheeEEecCCccccccCCc
Confidence            55545  8999999999999999888766

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.56  E-value=0.00019  Score=58.93  Aligned_cols=91  Identities=21%  Similarity=0.297  Sum_probs=56.9

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCch------HHHHHHHhhc-CccccccccceecCCChhHHHHHHHHhCC
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEI------QGAQQLLDLF-NWNQYFDHKQIFPGQKTTHFANLKKATGI   79 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~------~~~~~~l~~~-~l~~~fd~~~i~~~~~~~~~~~~~~~~g~   79 (280)
                      +-..++|+||+.|+|+.|.+.|+.+.++|+.+.+      ......++++ +...+-+  .++++.|.        .++.
T Consensus        68 ~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~--~~~~~~K~--------~v~~  137 (191)
T PF06941_consen   68 FFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDN--LIFTGDKT--------LVGG  137 (191)
T ss_dssp             TTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCC--EEEESSGG--------GC--
T ss_pred             hhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchhe--EEEecCCC--------eEec
Confidence            3456899999999999999999777777776652      1223445544 3222222  45555542        1222


Q ss_pred             CCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                        +  ++|||++.++..+...|+++|++..+.
T Consensus       138 --D--vlIDD~~~n~~~~~~~g~~~iLfd~p~  165 (191)
T PF06941_consen  138 --D--VLIDDRPHNLEQFANAGIPVILFDQPY  165 (191)
T ss_dssp             --S--EEEESSSHHHSS-SSESSEEEEE--GG
T ss_pred             --c--EEecCChHHHHhccCCCceEEEEcCCC
Confidence              2  899999999999999999999995543

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>KOG2630|consensus

Probab=97.55  E-value=0.00029  Score=58.26  Aligned_cols=96  Identities=16%  Similarity=0.232  Sum_probs=76.4

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC---Cc----cccccceEecCCCHHHHHHHHHHcCCCCCc
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN---LN----QYFSNKEIYPGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g---l~----~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ...|+++...++..+..|++++|-|++ ....+..+..+-+   +.    .|||. .++-+..-..|..+.+..|.+|.|
T Consensus       122 ~~v~aDv~~a~e~w~~~g~~vyIYSSg-sv~AqKllfg~s~~gdl~~y~~gyfDt-~iG~K~e~~sy~~I~~~Ig~s~~e  199 (254)
T KOG2630|consen  122 AHVYADVLPAIERWSGEGVRVYIYSSG-SVAAQKLLFGYSDAGDLRKYISGYFDT-TIGLKVESQSYKKIGHLIGKSPRE  199 (254)
T ss_pred             ccccchhHHHHHHHhhcCceEEEEcCC-cHHHHHHHHcccCcchHHHHhhhhhhc-cccceehhHHHHHHHHHhCCChhh
Confidence            478999999999999999999999999 6665554444432   22    35553 232233347799999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEEC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ++|.=|.+....+|+.+|+.+..+.
T Consensus       200 iLfLTd~~~Ea~aa~~aGl~a~l~~  224 (254)
T KOG2630|consen  200 ILFLTDVPREAAAARKAGLQAGLVS  224 (254)
T ss_pred             eEEeccChHHHHHHHhcccceeeee
Confidence            9999999999999999999998884

>KOG3120|consensus

Probab=97.53  E-value=0.00025  Score=58.34  Aligned_cols=102  Identities=16%  Similarity=0.290  Sum_probs=77.1

Q ss_pred             CcceecCCHHHHHHHHHHCCc-eEEEecCCCchHHHHHHHhhcCccccccccceecCCC--------------hh-----
Q psy8911           9 AHIKYYPDVPGILKYLKQNNC-LVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK--------------TT-----   68 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~-~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~--------------~~-----   68 (280)
                      ..++.-||+.++++.+++.|. .+.|+|.+.. -+.+.+|+.+++.++|+  .|++.+-              ..     
T Consensus        81 r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNs-fFIe~~Lea~~~~d~F~--~IfTNPa~~da~G~L~v~pyH~~hsC~~  157 (256)
T KOG3120|consen   81 RSIPIVPGMVRLIKSAAKLGCFELIIVSDANS-FFIEEILEAAGIHDLFS--EIFTNPACVDASGRLLVRPYHTQHSCNL  157 (256)
T ss_pred             hcCCCCccHHHHHHHHHhCCCceEEEEecCch-hHHHHHHHHccHHHHHH--HHhcCCcccCCCCcEEeecCCCCCccCc
Confidence            347889999999999999995 9999999999 99999999999999998  5553210              00     


Q ss_pred             ------------HHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEE-cCCCch
Q psy8911          69 ------------HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILV-EDGMTN  113 (280)
Q Consensus        69 ------------~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v-~~~~~~  113 (280)
                                  .|..-.-+-|+..++.+||||+-+|+.........-+.. +.|.+.
T Consensus       158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl  215 (256)
T KOG3120|consen  158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL  215 (256)
T ss_pred             CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence                        033333345889999999999999988877755544444 334443

>PLN02382 probable sucrose-phosphatase

Probab=97.53  E-value=0.00053  Score=63.10  Aligned_cols=46  Identities=17%  Similarity=0.105  Sum_probs=40.2

Q ss_pred             CCHHHHHHHHHHc---CCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKAT---GIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~---~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      .|...+..+++++   |+++++++.|||+.+|++.-+.+|...+.|.+.
T Consensus       175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA  223 (413)
T PLN02382        175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA  223 (413)
T ss_pred             CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence            5567789999999   999999999999999999999999777777654

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=97.52  E-value=0.00029  Score=68.29  Aligned_cols=91  Identities=13%  Similarity=0.144  Sum_probs=70.7

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      .+.|++++.+++|++.|+++.++|+. ....+..+.+.+|++++|..  ..+..|...++.+.++    .+.+.|+||..
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD-~~~ta~~iA~~lGI~~v~a~--~~PedK~~~v~~lq~~----g~~VamvGDG~  518 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGD-NRLTAAAIAAEAGVDDFIAE--ATPEDKIALIRQEQAE----GKLVAMTGDGT  518 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCEEEcC--CCHHHHHHHHHHHHHc----CCeEEEECCCc
Confidence            46699999999999999999999999 89999999999999887653  2222344444444332    34699999999


Q ss_pred             CCcccccccCceEEEECCC
Q psy8911         245 RNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       245 ~di~~a~~aG~~~i~v~~g  263 (280)
                      +|..+-++|++... +..|
T Consensus       519 NDapAL~~AdvGiA-m~~g  536 (675)
T TIGR01497       519 NDAPALAQADVGVA-MNSG  536 (675)
T ss_pred             chHHHHHhCCEeEE-eCCC
Confidence            99999999987644 3344

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=97.45  E-value=4e-05  Score=60.75  Aligned_cols=93  Identities=6%  Similarity=0.046  Sum_probs=61.3

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHH----HHHhhCCCccccccceEecCCCHHHH--HHHHHHcCCCCCcE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAK----QILNLINLNQYFSNKEIYPGPKTTHF--ESLKKATGIEYKDM  237 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~----~~l~~~gl~~~f~~~~~~~~~k~~~~--~~~~~~~~~~~~~~  237 (280)
                      ..+..-++.++..=.++|-.+..+|+. .+..++    .+.+.+.|...--....+++||+..|  -..++..++    -
T Consensus       113 SIPKevA~qLI~MHq~RGD~i~FvTGR-t~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~~----~  187 (237)
T COG3700         113 SIPKEVARQLIDMHQRRGDAIYFVTGR-TPGKTDTVSKTLAKNFHITNMNPVIFAGDKPKPGQYTKTQWIQDKNI----R  187 (237)
T ss_pred             cchHHHHHHHHHHHHhcCCeEEEEecC-CCCcccccchhHHhhcccCCCcceeeccCCCCcccccccHHHHhcCc----e
Confidence            345566788888889999999999998 655433    23334455332222222334555444  233444443    5


Q ss_pred             EEEeCCcCCcccccccCceEEEEC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ++.|||.+||.+|+.+|++.|.+-
T Consensus       188 IhYGDSD~Di~AAkeaG~RgIRil  211 (237)
T COG3700         188 IHYGDSDNDITAAKEAGARGIRIL  211 (237)
T ss_pred             EEecCCchhhhHHHhcCccceeEE
Confidence            889999999999999999888773

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.41  E-value=0.00027  Score=68.87  Aligned_cols=82  Identities=13%  Similarity=0.159  Sum_probs=66.0

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      .+.|++++.++.||++|+++.++|+- .+..++.+.+++||++++-.  ..|..|.+..+++.+    .-..+.||||..
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGD-n~~~A~~iA~~lGId~v~Ae--llPedK~~~V~~l~~----~g~~VamVGDGI  609 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGD-NRRTAEAIAKELGIDEVRAE--LLPEDKAEIVRELQA----EGRKVAMVGDGI  609 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcChHhhecc--CCcHHHHHHHHHHHh----cCCEEEEEeCCc
Confidence            46799999999999999999999999 89999999999999888864  334555555555542    226899999999


Q ss_pred             CCccccccc
Q psy8911         245 RNSHDVSPL  253 (280)
Q Consensus       245 ~di~~a~~a  253 (280)
                      ||--+-..|
T Consensus       610 NDAPALA~A  618 (713)
T COG2217         610 NDAPALAAA  618 (713)
T ss_pred             hhHHHHhhc
Confidence            996555554

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=97.37  E-value=0.0012  Score=56.62  Aligned_cols=131  Identities=7%  Similarity=-0.039  Sum_probs=76.9

Q ss_pred             eeEEEecCCCCCCcccccc--c---CcccccCCeeEc---cCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc--HHHH
Q psy8911         127 NHLSKKLDYTLWPLHVHDL--V---APFKKIGQKVMD---AKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE--ILHA  196 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~--~---~~~~~~~~~~~~---~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~--~~~~  196 (280)
                      ..++||+|+|+++......  .   .++..   ...+   -.....++.|++.++.+.|+++|+++.++||.+.  +..+
T Consensus       102 dA~V~DIDET~LsN~pY~~~~~~g~e~~~~---~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT  178 (275)
T TIGR01680       102 DTFLFNIDGTALSNIPYYKKHGYGSEKFDS---ELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT  178 (275)
T ss_pred             CEEEEECccccccCHHHHHHhcCCCCcCCh---hhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHH
Confidence            5889999999986432211  1   11110   1111   1123567899999999999999999999999932  2235


Q ss_pred             HHHHhhCCCccccccceEecC---CC--HHHHHHH----HHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         197 KQILNLINLNQYFSNKEIYPG---PK--TTHFESL----KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       197 ~~~l~~~gl~~~f~~~~~~~~---~k--~~~~~~~----~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      ..-|+..|+..+ +.....+.   .+  ...|..-    +.+-|-  .=...|||...|+......+.++.-+|+.
T Consensus       179 ~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP  251 (275)
T TIGR01680       179 EANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGY--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP  251 (275)
T ss_pred             HHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCc--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence            566777788654 33222211   11  1112211    112121  22458899999986555334677777654

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.36  E-value=0.0069  Score=52.19  Aligned_cols=42  Identities=14%  Similarity=0.180  Sum_probs=38.7

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY   55 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~   55 (280)
                      .-+.+.+.|++++++|++++++|..+. ..+..+++.+++..+
T Consensus        21 i~~~~~~al~~~~~~g~~v~iaTGR~~-~~~~~~~~~l~~~~~   62 (264)
T COG0561          21 ISPETKEALARLREKGVKVVLATGRPL-PDVLSILEELGLDGP   62 (264)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcCCCcc
Confidence            677899999999999999999999999 899999999998863

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=97.35  E-value=0.00041  Score=66.65  Aligned_cols=63  Identities=21%  Similarity=0.181  Sum_probs=50.8

Q ss_pred             ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      .+.+++.+|+||||++..                    .  ...+...+.|+.|+++|++++++|++ ....+...++.+
T Consensus       414 ~~~KLIfsDLDGTLLd~d--------------------~--~i~~~t~eAL~~L~ekGI~~VIATGR-s~~~i~~l~~~L  470 (694)
T PRK14502        414 QFKKIVYTDLDGTLLNPL--------------------T--YSYSTALDALRLLKDKELPLVFCSAK-TMGEQDLYRNEL  470 (694)
T ss_pred             ceeeEEEEECcCCCcCCC--------------------C--ccCHHHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHc
Confidence            356789999999998621                    1  13356789999999999999999999 888888899999


Q ss_pred             CCcccc
Q psy8911         204 NLNQYF  209 (280)
Q Consensus       204 gl~~~f  209 (280)
                      ++.++|
T Consensus       471 gl~~~~  476 (694)
T PRK14502        471 GIKDPF  476 (694)
T ss_pred             CCCCeE
Confidence            986544

>PTZ00174 phosphomannomutase; Provisional

Probab=97.35  E-value=0.0004  Score=59.44  Aligned_cols=54  Identities=17%  Similarity=0.081  Sum_probs=42.3

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      .+++.+|+||||++.                    ...  +-|...+.|++|+++|++++++|+. +...+...++.
T Consensus         5 ~klia~DlDGTLL~~--------------------~~~--is~~~~~ai~~l~~~Gi~~viaTGR-~~~~i~~~l~~   58 (247)
T PTZ00174          5 KTILLFDVDGTLTKP--------------------RNP--ITQEMKDTLAKLKSKGFKIGVVGGS-DYPKIKEQLGE   58 (247)
T ss_pred             CeEEEEECcCCCcCC--------------------CCC--CCHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHhh
Confidence            478999999999852                    112  3366899999999999999999999 77666655553

>PLN02887 hydrolase family protein

Probab=97.34  E-value=0.00038  Score=66.46  Aligned_cols=59  Identities=15%  Similarity=0.073  Sum_probs=47.9

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      +.+++.+|+||||++.                    ..  .+-+...+.|++|+++|++++++|+. ....+...++.++
T Consensus       307 ~iKLIa~DLDGTLLn~--------------------d~--~Is~~t~eAI~kl~ekGi~~vIATGR-~~~~i~~~l~~L~  363 (580)
T PLN02887        307 KFSYIFCDMDGTLLNS--------------------KS--QISETNAKALKEALSRGVKVVIATGK-ARPAVIDILKMVD  363 (580)
T ss_pred             CccEEEEeCCCCCCCC--------------------CC--ccCHHHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHhC
Confidence            4579999999999862                    11  24477889999999999999999999 7877777888777


Q ss_pred             Cc
Q psy8911         205 LN  206 (280)
Q Consensus       205 l~  206 (280)
                      +.
T Consensus       364 l~  365 (580)
T PLN02887        364 LA  365 (580)
T ss_pred             cc
Confidence            53

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.34  E-value=0.0007  Score=68.56  Aligned_cols=97  Identities=11%  Similarity=0.136  Sum_probs=71.7

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc--------cccc-----------------cceecCCC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ--------YFDH-----------------KQIFPGQK   66 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~--------~fd~-----------------~~i~~~~~   66 (280)
                      +|+|++.+.|+.|+++|+++.++|..+. ..+..+.+.+|+..        .++.                 ..+++...
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~-~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~  615 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNK-ETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE  615 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCH-HHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence            5799999999999999999999999998 89999999999853        2221                 01222222


Q ss_pred             hhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          67 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        67 ~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      +..=..+.+.++-..+.+.|+||+.+|+.+.++|++- |.+..+
T Consensus       616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g  658 (917)
T TIGR01116       616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSG  658 (917)
T ss_pred             HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCC
Confidence            2222444556666678899999999999999999993 444333

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.33  E-value=0.00053  Score=57.50  Aligned_cols=75  Identities=11%  Similarity=0.015  Sum_probs=53.0

Q ss_pred             CceEEE-ecCCCchHHHHHHHhhcCcc----ccccccceecCC--ChhHHHHHHHHhCCCCccEEEEeCCcccccccccC
Q psy8911          28 NCLVAA-ASRTSEIQGAQQLLDLFNWN----QYFDHKQIFPGQ--KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL  100 (280)
Q Consensus        28 g~~~~i-~Sn~~~~~~~~~~l~~~~l~----~~fd~~~i~~~~--~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~  100 (280)
                      ++.+.+ .++... +..+..++..++.    .+|.  .+....  |....+.+++.+|+++++|++|||+.+|+...+.+
T Consensus       138 ~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~--ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~a  214 (221)
T TIGR02463       138 SVPLLWRDSDSRM-PRFTALLADLGLAIVQGNRFS--HVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVA  214 (221)
T ss_pred             CccEEecCchhHH-HHHHHHHHHcCCeEEecCCee--EEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhC
Confidence            344444 444444 4555666666665    4454  455432  33349999999999999999999999999999999


Q ss_pred             CCeEE
Q psy8911         101 GVTCI  105 (280)
Q Consensus       101 G~~~i  105 (280)
                      |...+
T Consensus       215 g~~va  219 (221)
T TIGR02463       215 DYAVV  219 (221)
T ss_pred             CceEE
Confidence            97654

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.32  E-value=0.0043  Score=53.58  Aligned_cols=45  Identities=22%  Similarity=0.313  Sum_probs=39.5

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      .|...+..+++++|+++++++.|||+.+|+..-+.+|.. +++.++
T Consensus       196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~NA  240 (270)
T PRK10513        196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVG-VAMGNA  240 (270)
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCce-EEecCc
Confidence            677889999999999999999999999999999999985 445443

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=97.32  E-value=0.0011  Score=64.52  Aligned_cols=85  Identities=14%  Similarity=0.145  Sum_probs=65.3

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      .+.||+++.+++|++.|+++.++|+- .+..+..+.+.+|++++|-.  ..+..|....+.. ++   .-+-+.|+||..
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGD-n~~TA~aIA~elGId~v~A~--~~PedK~~iV~~l-Q~---~G~~VaMtGDGv  517 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGD-NPLTAAAIAAEAGVDDFLAE--ATPEDKLALIRQE-QA---EGRLVAMTGDGT  517 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCcEEEcc--CCHHHHHHHHHHH-HH---cCCeEEEECCCc
Confidence            46799999999999999999999999 99999999999999886653  1222333333332 33   335588999999


Q ss_pred             CCcccccccCce
Q psy8911         245 RNSHDVSPLGVT  256 (280)
Q Consensus       245 ~di~~a~~aG~~  256 (280)
                      ||-.+-++|.+-
T Consensus       518 NDAPALa~ADVG  529 (679)
T PRK01122        518 NDAPALAQADVG  529 (679)
T ss_pred             chHHHHHhCCEe
Confidence            998888887654

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=97.32  E-value=0.00091  Score=65.00  Aligned_cols=91  Identities=13%  Similarity=0.147  Sum_probs=68.3

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      ++.|++++.+++|++.|+++.++|+- .+..+..+.+++|++++|..      -.|+.=..+.+.++-.-+-+.|+||..
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGD-n~~TA~aIA~elGI~~v~A~------~~PedK~~iV~~lQ~~G~~VaMtGDGv  513 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGD-NELTAATIAKEAGVDRFVAE------CKPEDKINVIREEQAKGHIVAMTGDGT  513 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCceEEcC------CCHHHHHHHHHHHHhCCCEEEEECCCh
Confidence            56799999999999999999999999 99999999999999987653      233332222233333335688999999


Q ss_pred             CCcccccccCceEEEECCC
Q psy8911         245 RNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       245 ~di~~a~~aG~~~i~v~~g  263 (280)
                      ||--+-++|.+- +.+..|
T Consensus       514 NDAPALa~ADVG-IAMgsG  531 (673)
T PRK14010        514 NDAPALAEANVG-LAMNSG  531 (673)
T ss_pred             hhHHHHHhCCEE-EEeCCC
Confidence            998888887664 333344

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=97.30  E-value=0.003  Score=47.75  Aligned_cols=96  Identities=13%  Similarity=0.189  Sum_probs=76.1

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      ++|+.+.+.|++|++. +.++|+|.... -......+..|+.    ...++.+.+...=..+.+.++-+.+-|+||||..
T Consensus        30 klf~ev~e~iqeL~d~-V~i~IASgDr~-gsl~~lae~~gi~----~~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGa  103 (152)
T COG4087          30 KLFSEVSETIQELHDM-VDIYIASGDRK-GSLVQLAEFVGIP----VERVFAGADPEMKAKIIRELKKRYEKVVMVGNGA  103 (152)
T ss_pred             EEcHhhHHHHHHHHHh-heEEEecCCcc-hHHHHHHHHcCCc----eeeeecccCHHHHHHHHHHhcCCCcEEEEecCCc
Confidence            6899999999999999 99999999888 7788888887742    1144556666556677788887889999999999


Q ss_pred             ccccccccCCCeEEEEcCCCch
Q psy8911          92 RNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        92 ~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      +|+-+-+++-.-.+-+.+...+
T Consensus       104 ND~laLr~ADlGI~tiq~e~v~  125 (152)
T COG4087         104 NDILALREADLGICTIQQEGVP  125 (152)
T ss_pred             chHHHhhhcccceEEeccCCcc
Confidence            9999999987776666544333

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=97.28  E-value=0.0011  Score=55.30  Aligned_cols=120  Identities=18%  Similarity=0.150  Sum_probs=78.0

Q ss_pred             cceeEEEecCCCCCCccccccc-----CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH---
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLV-----APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---  195 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~---  195 (280)
                      ....++.|+|-|++|.....-.     .+|.... +.-+  .....++.||+.++|++.-++|.++.-+||. ..+.   
T Consensus        78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV--~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR-~~~~~~~  154 (274)
T COG2503          78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWV--QAKKSKAVPGAVEFLNYVNSNGGKIFYISNR-DQENEKD  154 (274)
T ss_pred             CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHH--hhcccccCccHHHHHHHHHhcCcEEEEEecc-chhcccc
Confidence            3458899999999886443221     2222111 1111  1235688999999999999999999999999 6554   


Q ss_pred             -HHHHHhhCCCccccccceEec---CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccccc
Q psy8911         196 -AKQILNLINLNQYFSNKEIYP---GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVS  251 (280)
Q Consensus       196 -~~~~l~~~gl~~~f~~~~~~~---~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~  251 (280)
                       ...-|+.+||...-+......   ++|...+..+-+    ..+=+++|||+..|..+..
T Consensus       155 ~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~d~~  210 (274)
T COG2503         155 GTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----DYKIVMLVGDNLDDFGDNA  210 (274)
T ss_pred             hhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----ccceeeEecCchhhhcchh
Confidence             456788888876555332222   244444554444    5556789999999865543

>KOG2470|consensus

Probab=97.18  E-value=0.00047  Score=60.40  Aligned_cols=97  Identities=15%  Similarity=0.273  Sum_probs=72.2

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc---Ccccccccccee-cCCChh-----------------H
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF---NWNQYFDHKQIF-PGQKTT-----------------H   69 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~---~l~~~fd~~~i~-~~~~~~-----------------~   69 (280)
                      +.-.|....+|+.|+++|.++.++||+|. .++..-++.+   .|.+.||  .|+ ...++.                 .
T Consensus       239 i~r~~ql~~fl~kL~~~GKklFLiTNSPy-sFVd~GM~flvG~~WRdlFD--VVIvqA~KP~Fftde~rPfR~~dek~~s  315 (510)
T KOG2470|consen  239 IERNPQLLAFLRKLKDHGKKLFLITNSPY-SFVDKGMRFLVGDDWRDLFD--VVIVQANKPEFFTDERRPFRKYDEKRGS  315 (510)
T ss_pred             hhccHHHHHHHHHHHHhcCcEEEEeCCch-hhhhcCceeeeCccHHhhhh--eeEEecCCCcccccccCcchhhcccccc
Confidence            44567788999999999999999999999 8887766654   5788999  433 221111                 0


Q ss_pred             -------------------HHHHHHHhCCCCccEEEEeCCc-ccccccc-cCCCeEEEEcCC
Q psy8911          70 -------------------FANLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCILVEDG  110 (280)
Q Consensus        70 -------------------~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~-~~G~~~i~v~~~  110 (280)
                                         ....++-.|-.-.++++|||.. +|+..-. +.||++-.+-+.
T Consensus       316 l~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~E  377 (510)
T KOG2470|consen  316 LLWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIPE  377 (510)
T ss_pred             hhhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchHH
Confidence                               4555666778889999999995 5877666 899998776443

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=97.17  E-value=0.00026  Score=56.22  Aligned_cols=88  Identities=19%  Similarity=0.235  Sum_probs=59.8

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCc-cccccccceecCCCh----hHHHHHHHHhCCCCccE
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNW-NQYFDHKQIFPGQKT----THFANLKKATGIEYKDM   84 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l-~~~fd~~~i~~~~~~----~~~~~~~~~~g~~p~~~   84 (280)
                      .+.+.||+.++|+.|.+. |.++|.|++.. ..++.+++.+.- ..+|+  .++.....    +.+.+-++.+|-+++++
T Consensus        34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~-~ya~~v~~~ldp~~~~~~--~~~~r~~~~~~~~~~~KdL~~l~~~~~~v  109 (159)
T PF03031_consen   34 YVKLRPGLDEFLEELSKH-YEVVIWTSASE-EYAEPVLDALDPNGKLFS--RRLYRDDCTFDKGSYIKDLSKLGRDLDNV  109 (159)
T ss_dssp             EEEE-TTHHHHHHHHHHH-CEEEEE-SS-H-HHHHHHHHHHTTTTSSEE--EEEEGGGSEEETTEEE--GGGSSS-GGGE
T ss_pred             eEeeCchHHHHHHHHHHh-ceEEEEEeehh-hhhhHHHHhhhhhccccc--cccccccccccccccccchHHHhhccccE
Confidence            467899999999999665 99999999999 999999999986 56787  44433211    11234455567789999


Q ss_pred             EEEeCCcccccccccCC
Q psy8911          85 VFFDDEERNSHDVSPLG  101 (280)
Q Consensus        85 l~v~D~~~~i~aa~~~G  101 (280)
                      |+|||++.....-...+
T Consensus       110 vivDD~~~~~~~~~~N~  126 (159)
T PF03031_consen  110 VIVDDSPRKWALQPDNG  126 (159)
T ss_dssp             EEEES-GGGGTTSGGGE
T ss_pred             EEEeCCHHHeeccCCce
Confidence            99999987644333333

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.17  E-value=0.00053  Score=61.05  Aligned_cols=49  Identities=12%  Similarity=0.215  Sum_probs=40.1

Q ss_pred             cCCChhHHHHHHHHh--------CC-----CCccEEEEeCCc-ccccccccCCCeEEEEcCCC
Q psy8911          63 PGQKTTHFANLKKAT--------GI-----EYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        63 ~~~~~~~~~~~~~~~--------g~-----~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +.+....|..+++.+        ++     ++++++||||+. .||.+|+++||.+++|.+|.
T Consensus       232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~  294 (321)
T TIGR01456       232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGV  294 (321)
T ss_pred             CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccc
Confidence            445555588888877        43     457999999997 89999999999999998874

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=97.15  E-value=0.0014  Score=55.60  Aligned_cols=209  Identities=15%  Similarity=0.166  Sum_probs=119.4

Q ss_pred             CCceEEEecCCCchHHHHHHHhhc---Cccccccccceec-CCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCC
Q psy8911          27 NNCLVAAASRTSEIQGAQQLLDLF---NWNQYFDHKQIFP-GQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV  102 (280)
Q Consensus        27 ~g~~~~i~Sn~~~~~~~~~~l~~~---~l~~~fd~~~i~~-~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~  102 (280)
                      .-+.+.|+|+++. +..-++++..   ||.  +.. .+++ +..+..|..+.   ++    -||.--...|++.|.++|+
T Consensus        35 ~~VEVVllSRNsp-dTGlRv~nSI~hygL~--ItR-~~ft~G~~~~~Yl~af---~v----~LFLSan~~DV~~Ai~~G~  103 (264)
T PF06189_consen   35 PLVEVVLLSRNSP-DTGLRVFNSIRHYGLD--ITR-AAFTGGESPYPYLKAF---NV----DLFLSANEDDVQEAIDAGI  103 (264)
T ss_pred             CceEEEEEecCCH-HHHHHHHHhHHHhCCc--cee-eeecCCCCHHHHHHHh---CC----ceEeeCCHHHHHHHHHcCC
Confidence            3577899998888 6666655443   442  221 2333 44454465554   33    3788888899999999999


Q ss_pred             eEEEEcCCCchhhhhccccccccceeEEEecCCCCCCccccccc--CcccccC-CeeE-ccCCceeccCCCHHHHHHHHh
Q psy8911         103 TCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLV--APFKKIG-QKVM-DAKGTLIKYYRGVPEILRYLK  178 (280)
Q Consensus       103 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~--~~~~~~~-~~~~-~~~~~~~~~~~g~~~~L~~L~  178 (280)
                      .+..+..........  ...    --+.||-|++|.+.+.....  ..+.... ++.. ......--++......|.+|+
T Consensus       104 ~Aa~v~~~~~~~~~~--~~q----lRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ  177 (264)
T PF06189_consen  104 PAATVLPSPPDDDES--DDQ----LRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQ  177 (264)
T ss_pred             CcEEeecCCCCCCCC--CCc----eEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHH
Confidence            988875432211110  001    23589999999864332111  1110000 0000 000111224444555555555


Q ss_pred             hC------CcEEEEEcCCCcHHH--HHHHHhhCCCc---cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCc
Q psy8911         179 EN------KCLVAAASRTSEILH--AKQILNLINLN---QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNS  247 (280)
Q Consensus       179 ~~------g~~~~i~T~~~~~~~--~~~~l~~~gl~---~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di  247 (280)
                      ++      =++++++|..+.+..  +-+.|+..|+.   -+|-    ++-+|.+.+..+      .|  =+||+|....+
T Consensus       178 ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFL----gG~~K~~vL~~~------~p--hIFFDDQ~~H~  245 (264)
T PF06189_consen  178 KKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFL----GGLPKGPVLKAF------RP--HIFFDDQDGHL  245 (264)
T ss_pred             HhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHh----CCCchhHHHHhh------CC--CEeecCchhhh
Confidence            43      388999998855554  33446666664   2332    223554433322      22  38999999999


Q ss_pred             ccccccCceEEEECCCCC
Q psy8911         248 HDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       248 ~~a~~aG~~~i~v~~g~~  265 (280)
                      +.|. .+++++.|++|..
T Consensus       246 ~~a~-~~vps~hVP~gv~  262 (264)
T PF06189_consen  246 ESAS-KVVPSGHVPYGVA  262 (264)
T ss_pred             hHhh-cCCCEEeccCCcC
Confidence            9999 8999999999864

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=97.10  E-value=0.00094  Score=64.87  Aligned_cols=88  Identities=9%  Similarity=0.061  Sum_probs=68.1

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      ++.||+.+.+++|++.|+++.++|.... ..++.+-+.+|+.++|-  .....+|....+.. ++.   -..+.|+||..
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~-~ta~~iA~~lGI~~v~a--~~~PedK~~~v~~l-q~~---g~~VamvGDG~  518 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNR-LTAAAIAAEAGVDDFIA--EATPEDKIALIRQE-QAE---GKLVAMTGDGT  518 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCEEEc--CCCHHHHHHHHHHH-HHc---CCeEEEECCCc
Confidence            6789999999999999999999999999 89999999999977665  33222222223333 222   34699999999


Q ss_pred             ccccccccCCCeEEE
Q psy8911          92 RNSHDVSPLGVTCIL  106 (280)
Q Consensus        92 ~~i~aa~~~G~~~i~  106 (280)
                      +|..+-++++.-...
T Consensus       519 NDapAL~~AdvGiAm  533 (675)
T TIGR01497       519 NDAPALAQADVGVAM  533 (675)
T ss_pred             chHHHHHhCCEeEEe
Confidence            999999988876543

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=97.09  E-value=0.00088  Score=49.10  Aligned_cols=73  Identities=14%  Similarity=0.068  Sum_probs=44.5

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHH---HHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEE
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQG---AQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFF   87 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~---~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v   87 (280)
                      -+++||+.++|+.|+++|+++.++||++. ..   ....|+.+|+.---+  .|+++.....  ..+++. -....+.++
T Consensus        13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~-~s~~~~~~~L~~~Gi~~~~~--~i~ts~~~~~--~~l~~~-~~~~~v~vl   86 (101)
T PF13344_consen   13 NEPIPGAVEALDALRERGKPVVFLTNNSS-RSREEYAKKLKKLGIPVDED--EIITSGMAAA--EYLKEH-KGGKKVYVL   86 (101)
T ss_dssp             TEE-TTHHHHHHHHHHTTSEEEEEES-SS-S-HHHHHHHHHHTTTT--GG--GEEEHHHHHH--HHHHHH-TTSSEEEEE
T ss_pred             CCcCcCHHHHHHHHHHcCCCEEEEeCCCC-CCHHHHHHHHHhcCcCCCcC--EEEChHHHHH--HHHHhc-CCCCEEEEE
Confidence            46899999999999999999999999985 33   333457778764344  6666544321  222221 234556666


Q ss_pred             eC
Q psy8911          88 DD   89 (280)
Q Consensus        88 ~D   89 (280)
                      |-
T Consensus        87 G~   88 (101)
T PF13344_consen   87 GS   88 (101)
T ss_dssp             S-
T ss_pred             cC
Confidence            64

...

>KOG2882|consensus

Probab=97.08  E-value=0.00088  Score=57.76  Aligned_cols=45  Identities=20%  Similarity=0.191  Sum_probs=40.7

Q ss_pred             HHHHHHHHhCCCCccEEEEeCCcc-cccccccCCCeEEEEcCCCch
Q psy8911          69 HFANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        69 ~~~~~~~~~g~~p~~~l~v~D~~~-~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      .+..+.++.+++|++|+||||+.. ||.-++++|++++++.+|...
T Consensus       229 m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~  274 (306)
T KOG2882|consen  229 MFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTT  274 (306)
T ss_pred             HHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCc
Confidence            388999999999999999999965 999999999999999887653

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.95  E-value=0.0015  Score=63.81  Aligned_cols=83  Identities=13%  Similarity=0.206  Sum_probs=66.9

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      ++.|++.+.++.||++|+++.++|.-.. ..++.+-+.+|+++++-  .+.+.+|....+.+.+    .-..+.||||..
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~-~~A~~iA~~lGId~v~A--ellPedK~~~V~~l~~----~g~~VamVGDGI  609 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGDNR-RTAEAIAKELGIDEVRA--ELLPEDKAEIVRELQA----EGRKVAMVGDGI  609 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcChHhhec--cCCcHHHHHHHHHHHh----cCCEEEEEeCCc
Confidence            5789999999999999999999999999 99999999999988887  6666666654444432    227899999999


Q ss_pred             ccccccccCC
Q psy8911          92 RNSHDVSPLG  101 (280)
Q Consensus        92 ~~i~aa~~~G  101 (280)
                      +|.-|-..|-
T Consensus       610 NDAPALA~Ad  619 (713)
T COG2217         610 NDAPALAAAD  619 (713)
T ss_pred             hhHHHHhhcC
Confidence            9955544443

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=96.93  E-value=0.0042  Score=53.33  Aligned_cols=97  Identities=18%  Similarity=0.185  Sum_probs=73.5

Q ss_pred             cCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHH---HHHhhCCCc--c-------ccc----------------cceE-ec
Q psy8911         166 YYRGVPEILRYLKENKCLVAAASRTSEILHAK---QILNLINLN--Q-------YFS----------------NKEI-YP  216 (280)
Q Consensus       166 ~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~---~~l~~~gl~--~-------~f~----------------~~~~-~~  216 (280)
                      .=+.+.++++.|+.+|+++..+|.. .+.+..   +.|+.+||+  +       ++.                ++.. .+
T Consensus        82 ie~~~~~~i~~lq~~~~~v~alT~~-~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~  160 (252)
T PF11019_consen   82 IESDVPNIINSLQNKGIPVIALTAR-GPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG  160 (252)
T ss_pred             cchhHHHHHHHHHHCCCcEEEEcCC-ChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence            4579999999999999999999999 666543   446666764  1       110                0111 11


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccc----cCceEEEECCC
Q psy8911         217 GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSP----LGVTCIHVKKG  263 (280)
Q Consensus       217 ~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~----aG~~~i~v~~g  263 (280)
                      -+|.+.+..++.+.|..|+.+|||+|+..++.+..+    .|+..+++.+.
T Consensus       161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt  211 (252)
T PF11019_consen  161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT  211 (252)
T ss_pred             CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence            267788999999999999999999999999877655    68888888754

The function is not known.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=96.91  E-value=0.00094  Score=54.81  Aligned_cols=88  Identities=19%  Similarity=0.265  Sum_probs=52.3

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-------HHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCC
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEI-------LHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEY  234 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~-------~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~  234 (280)
                      ..++++||+.++|++|++.|+.+.++|+....       ...+.+-++++...+ +.+ +..+.|.        .++  .
T Consensus        70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~-~~~-~~~~~K~--------~v~--~  137 (191)
T PF06941_consen   70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPY-DNL-IFTGDKT--------LVG--G  137 (191)
T ss_dssp             TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHH-CCE-EEESSGG--------GC----
T ss_pred             cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCch-heE-EEecCCC--------eEe--c
Confidence            46789999999999999999767666666232       222333344443222 222 2333332        112  2


Q ss_pred             CcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         235 KDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       235 ~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +  ++|+|++.++..+...|++++++...
T Consensus       138 D--vlIDD~~~n~~~~~~~g~~~iLfd~p  164 (191)
T PF06941_consen  138 D--VLIDDRPHNLEQFANAGIPVILFDQP  164 (191)
T ss_dssp             S--EEEESSSHHHSS-SSESSEEEEE--G
T ss_pred             c--EEecCChHHHHhccCCCceEEEEcCC
Confidence            2  89999999999999999999999743

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=96.89  E-value=0.0039  Score=61.90  Aligned_cols=97  Identities=10%  Similarity=0.039  Sum_probs=68.5

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccc-ccc-----------------------ceEecCCCH
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-FSN-----------------------KEIYPGPKT  220 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~-f~~-----------------------~~~~~~~k~  220 (280)
                      ++.|++++.++.|++.|+++.++|+- .+..+..+.+++||.+- +..                       ..++..-.|
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD-~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P  520 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGD-HLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP  520 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence            57799999999999999999999999 89999999999999751 100                       012333333


Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         221 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +.=..+.+.++-.-+-+.|+||..+|..+-++|.+- |.+..|
T Consensus       521 e~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~g  562 (755)
T TIGR01647       521 EHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGA  562 (755)
T ss_pred             HHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCC
Confidence            332233333333446788999999998888887665 334444

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=96.85  E-value=0.0044  Score=62.42  Aligned_cols=97  Identities=10%  Similarity=0.079  Sum_probs=67.8

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--ccc-----------------cceEecCCCHHHHHH
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFS-----------------NKEIYPGPKTTHFES  225 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~f~-----------------~~~~~~~~k~~~~~~  225 (280)
                      ++.|++++.+++|++.|+++.++|+- .+..+..+.+.+||..  ...                 ...++..-.|+.=..
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD-~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~  593 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGD-NEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR  593 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence            56799999999999999999999999 8999999999999962  110                 012233333333222


Q ss_pred             HHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         226 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       226 ~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +.+.++-.-+.+.|+||..+|..+-++|.+-.. +..|
T Consensus       594 iV~~lq~~G~vVam~GDGvNDapALk~AdVGIA-mg~g  630 (867)
T TIGR01524       594 IIGLLKKAGHTVGFLGDGINDAPALRKADVGIS-VDTA  630 (867)
T ss_pred             HHHHHHhCCCEEEEECCCcccHHHHHhCCEEEE-eCCc
Confidence            222222233578899999999999988876633 3344

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=96.72  E-value=0.0025  Score=53.14  Aligned_cols=77  Identities=16%  Similarity=0.175  Sum_probs=54.3

Q ss_pred             eEEEecCCCchHHHHHHHhhcCccccccc--cceecC--CChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          30 LVAAASRTSEIQGAQQLLDLFNWNQYFDH--KQIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        30 ~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~--~~i~~~--~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      .+.++++... ..++..++..++..++..  ..+...  +|...++.+++.+|++++++++|||+.+|+.+.+.+|+...
T Consensus       109 ~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~va  187 (215)
T TIGR01487       109 LVIMREGKDV-DEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVA  187 (215)
T ss_pred             EEEecCCccH-HHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEE
Confidence            3445566565 667777777776554321  112221  23334999999999999999999999999999999997755


Q ss_pred             EE
Q psy8911         106 LV  107 (280)
Q Consensus       106 ~v  107 (280)
                      .-
T Consensus       188 m~  189 (215)
T TIGR01487       188 VA  189 (215)
T ss_pred             cC
Confidence            43

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=96.71  E-value=0.0059  Score=48.23  Aligned_cols=115  Identities=15%  Similarity=0.133  Sum_probs=68.4

Q ss_pred             EEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH---HHHHHhhC--
Q psy8911         129 LSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---AKQILNLI--  203 (280)
Q Consensus       129 ~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~---~~~~l~~~--  203 (280)
                      +++|.|||+.-+....+.          ....+.. ...+|+.++...++++||++.-+|+. +...   .+..|+..  
T Consensus         2 VvsDIDGTiT~SD~~G~i----------~~~~G~d-~~h~g~~~l~~~i~~~GY~ilYlTaR-p~~qa~~Tr~~L~~~~q   69 (157)
T PF08235_consen    2 VVSDIDGTITKSDVLGHI----------LPILGKD-WTHPGAAELYRKIADNGYKILYLTAR-PIGQANRTRSWLAQHQQ   69 (157)
T ss_pred             EEEeccCCcCccchhhhh----------hhccCch-hhhhcHHHHHHHHHHCCeEEEEECcC-cHHHHHHHHHHHHHHHh
Confidence            578999999876543321          1112222 57799999999999999999999999 5443   34455554  


Q ss_pred             ---CCccc---cc------cc--eEecCCCHHHH-HHHHHHcC--CCCCcEE---EEeCCcCCcccccccCce
Q psy8911         204 ---NLNQY---FS------NK--EIYPGPKTTHF-ESLKKATG--IEYKDMV---FFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       204 ---gl~~~---f~------~~--~~~~~~k~~~~-~~~~~~~~--~~~~~~l---~igD~~~di~~a~~aG~~  256 (280)
                         +|.+-   +.      ..  +.. ..+++.| ..+++.+.  +++....   -+|++..|+.+=+++|++
T Consensus        70 ~~~~lP~Gpv~~sP~~l~~al~rEvi-~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip  141 (157)
T PF08235_consen   70 QGHNLPDGPVLLSPDSLFSALHREVI-SKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP  141 (157)
T ss_pred             CCccCCCCCEEECCcchhhhhhcccc-ccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence               33211   11      00  000 1344444 22223221  1222222   479999999999999974

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=96.71  E-value=0.006  Score=61.70  Aligned_cols=91  Identities=13%  Similarity=0.121  Sum_probs=65.5

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--ccc-----------------cceEecCCCHHHHHH
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFS-----------------NKEIYPGPKTTHFES  225 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~f~-----------------~~~~~~~~k~~~~~~  225 (280)
                      ++.|++++.++.|++.|+++.++|+- .+..+..+.+.+||.+  ...                 ...++..-.|+.=..
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD-~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~  628 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGD-SELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKER  628 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHH
Confidence            56799999999999999999999999 8999999999999962  000                 012233333433233


Q ss_pred             HHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         226 LKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       226 ~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                      +.+.++-.-+-+.|+||..+|..+-++|.+-
T Consensus       629 IV~~Lq~~G~vVam~GDGvNDaPALk~ADVG  659 (902)
T PRK10517        629 IVTLLKREGHVVGFMGDGINDAPALRAADIG  659 (902)
T ss_pred             HHHHHHHCCCEEEEECCCcchHHHHHhCCEE
Confidence            3333333345688999999998888887654

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=96.66  E-value=0.0062  Score=61.99  Aligned_cols=91  Identities=13%  Similarity=0.058  Sum_probs=64.9

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccc---------cc------------cceEecCCCHHHH
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY---------FS------------NKEIYPGPKTTHF  223 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~---------f~------------~~~~~~~~k~~~~  223 (280)
                      ++.|++++.++.|+++|+++.++|+- .+..+..+.+.+||.+-         |+            ...++..-.|+.=
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD-~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K  657 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGD-NIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK  657 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCC-ChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence            57799999999999999999999999 99999999999999631         11            1123333333332


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         224 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       224 ~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                      ..+.+.++-.-+-+.|+||..+|..+-++|-+-
T Consensus       658 ~~iV~~lq~~g~vVam~GDGvNDapALk~AdVG  690 (941)
T TIGR01517       658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLADVG  690 (941)
T ss_pred             HHHHHHHHHCCCEEEEECCCCchHHHHHhCCcc
Confidence            222233322335788999999998888886443

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=96.65  E-value=0.0058  Score=51.28  Aligned_cols=88  Identities=14%  Similarity=0.109  Sum_probs=67.4

Q ss_pred             ceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhH---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          29 CLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        29 ~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      +.+-|-|.+-.|..++-+|  ++|.++|...-|+++.++++   |+++.+++|-+....++|||....-.||+..+|..+
T Consensus       177 vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw  254 (274)
T TIGR01658       177 INVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFV  254 (274)
T ss_pred             eEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeE
Confidence            4444444445544444333  46778998778999988876   999999999988999999999999999999999999


Q ss_pred             EEcCCCchhhhhc
Q psy8911         106 LVEDGMTNAITLY  118 (280)
Q Consensus       106 ~v~~~~~~~~~~~  118 (280)
                      -+....+...+..
T Consensus       255 ~I~~h~Dl~~l~~  267 (274)
T TIGR01658       255 KIDLHPDSSHRFP  267 (274)
T ss_pred             EeecCCCHHHhCc
Confidence            8876665544433

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=96.61  E-value=0.0052  Score=51.43  Aligned_cols=75  Identities=17%  Similarity=0.209  Sum_probs=51.3

Q ss_pred             eEEEecCCCchHHHHHHHhhcCccccc---c-ccceecC--CChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCe
Q psy8911          30 LVAAASRTSEIQGAQQLLDLFNWNQYF---D-HKQIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  103 (280)
Q Consensus        30 ~~~i~Sn~~~~~~~~~~l~~~~l~~~f---d-~~~i~~~--~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~  103 (280)
                      ...+.+.... +.++.+++.++..-.+   . ...+...  +|...++.+++.+|++++++++|||+.+|+.+.+.+|..
T Consensus       109 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~  187 (225)
T TIGR01482       109 LVKMRYGIDV-DTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG  187 (225)
T ss_pred             eEEEeecCCH-HHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce
Confidence            3455555555 5677777777643111   0 0112221  233349999999999999999999999999999999986


Q ss_pred             EE
Q psy8911         104 CI  105 (280)
Q Consensus       104 ~i  105 (280)
                      ..
T Consensus       188 va  189 (225)
T TIGR01482       188 VA  189 (225)
T ss_pred             EE
Confidence            44

catalyze the same reaction as SPP.

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.49  E-value=0.0079  Score=49.68  Aligned_cols=59  Identities=17%  Similarity=0.088  Sum_probs=46.7

Q ss_pred             ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      .++.++..|+||||+++ ..                   +.   ..+.+++..|++.|+++..+|++ .........+.+
T Consensus         5 ~~~~lIFtDlD~TLl~~-~y-------------------e~---~pA~pv~~el~d~G~~Vi~~SSK-T~aE~~~l~~~l   60 (274)
T COG3769           5 QMPLLIFTDLDGTLLPH-SY-------------------EW---QPAAPVLLELKDAGVPVILCSSK-TRAEMLYLQKSL   60 (274)
T ss_pred             ccceEEEEcccCcccCC-CC-------------------CC---CccchHHHHHHHcCCeEEEeccc-hHHHHHHHHHhc
Confidence            35677788999999872 11                   11   34778999999999999999999 887777788888


Q ss_pred             CCc
Q psy8911         204 NLN  206 (280)
Q Consensus       204 gl~  206 (280)
                      |+.
T Consensus        61 ~v~   63 (274)
T COG3769          61 GVQ   63 (274)
T ss_pred             CCC
Confidence            886

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=96.44  E-value=0.0094  Score=60.32  Aligned_cols=97  Identities=14%  Similarity=0.162  Sum_probs=67.5

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc--ccc-----------------cceEecCCCHHHHHH
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ--YFS-----------------NKEIYPGPKTTHFES  225 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~--~f~-----------------~~~~~~~~k~~~~~~  225 (280)
                      ++.|++++.++.|+++|+++.++|+- .+..+..+.+.+||..  ...                 ...++..-.|+.=..
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD-~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~  628 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGD-NPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR  628 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence            56799999999999999999999999 8999999999999962  000                 001233333333222


Q ss_pred             HHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         226 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       226 ~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +.+.++-.-+-+.|+||..+|..+-++|.+- |.+..|
T Consensus       629 iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~g  665 (903)
T PRK15122        629 VLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSG  665 (903)
T ss_pred             HHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCcc
Confidence            2333333345688999999998888887665 334344

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=96.44  E-value=0.0044  Score=52.51  Aligned_cols=54  Identities=22%  Similarity=0.146  Sum_probs=41.1

Q ss_pred             eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      ++.+|+||||++...                    .+.   ...++++ ++++|++++++|++ ....+...++.+++.
T Consensus         1 li~~DlDgTLl~~~~--------------------~~~---~~~~~~~-~~~~gi~~viaTGR-~~~~v~~~~~~l~l~   54 (236)
T TIGR02471         1 LIITDLDNTLLGDDE--------------------GLA---SFVELLR-GSGDAVGFGIATGR-SVESAKSRYAKLNLP   54 (236)
T ss_pred             CeEEeccccccCCHH--------------------HHH---HHHHHHH-hcCCCceEEEEeCC-CHHHHHHHHHhCCCC
Confidence            367899999986211                    122   2336776 69999999999999 899999999998875

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=96.39  E-value=0.012  Score=60.59  Aligned_cols=92  Identities=10%  Similarity=-0.077  Sum_probs=65.6

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccc-c--------cc----------------------ce
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-F--------SN----------------------KE  213 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~-f--------~~----------------------~~  213 (280)
                      ++.|++++.++.|+++|+++.++|+- .+..+..+.+.+||.+- +        +.                      ..
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD-~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~  724 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGD-FPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL  724 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence            57799999999999999999999999 99999999999999531 0        00                      01


Q ss_pred             EecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceE
Q psy8911         214 IYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC  257 (280)
Q Consensus       214 ~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~  257 (280)
                      ++..-.|+.=..+.+.++-.-+-+.|+||..+|..+-++|.+-.
T Consensus       725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGI  768 (1053)
T TIGR01523       725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGI  768 (1053)
T ss_pred             EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccE
Confidence            22222333322233333333467889999999999888876543

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR01675 plant-AP plant acid phosphatase

Probab=96.36  E-value=0.017  Score=48.62  Aligned_cols=98  Identities=13%  Similarity=0.102  Sum_probs=64.0

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHH---HHHHHhhcCccccccccceecC-CChh----HHHHHHH-HhCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG---AQQLLDLFNWNQYFDHKQIFPG-QKTT----HFANLKK-ATGI   79 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~---~~~~l~~~~l~~~fd~~~i~~~-~~~~----~~~~~~~-~~g~   79 (280)
                      ...++.|+++++++.|+++|++++++|+-+. ..   ...-|...|+..+ ++ .+.-+ .+..    .|+.-.+ ++--
T Consensus       117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e-~~r~~T~~nL~~~G~~~~-~~-LiLR~~~d~~~~~~~yKs~~R~~l~~  193 (229)
T TIGR01675       117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWE-ELRNATLDNLINAGFTGW-KH-LILRGLEDSNKTVVTYKSEVRKSLME  193 (229)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCh-HHHHHHHHHHHHcCCCCc-Ce-eeecCCCCCCchHhHHHHHHHHHHHh
Confidence            4568899999999999999999999999997 55   5566777786554 52 22222 1111    1443332 1211


Q ss_pred             C-CccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          80 E-YKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        80 ~-p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      . -.=...|||...|+.+ -.+|.++.-+|++
T Consensus       194 ~GYrIv~~iGDq~sDl~G-~~~~~RtFKLPNP  224 (229)
T TIGR01675       194 EGYRIWGNIGDQWSDLLG-SPPGRRTFKLPNP  224 (229)
T ss_pred             CCceEEEEECCChHHhcC-CCccCceeeCCCC
Confidence            1 1225678999999865 4567777777665

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=96.26  E-value=0.14  Score=49.77  Aligned_cols=42  Identities=12%  Similarity=0.214  Sum_probs=37.0

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEE--eCCcCCcccccccCceEEE
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFF--DDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~i--gD~~~di~~a~~aG~~~i~  259 (280)
                      .|...++.+++.++++.++++.|  ||+.+|+..-+.+|..++.
T Consensus       613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM  656 (694)
T PRK14502        613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV  656 (694)
T ss_pred             CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence            66788999999999999999999  9999999998888876554

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=96.25  E-value=0.013  Score=53.79  Aligned_cols=90  Identities=21%  Similarity=0.250  Sum_probs=74.1

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCc----cccccccceecCCChhHHHHHHHHhCCCCccEEEE
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNW----NQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFF   87 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l----~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v   87 (280)
                      ++|....+.++.|+++|+-++|+|-+.. ..++.+.++++-    .+.|+...+-..++....+.+++++++-.+..+|+
T Consensus       255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~~-~da~evF~khp~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFi  333 (574)
T COG3882         255 EAFKTFQNFIKGLKKQGVLLAVCSKNTE-KDAKEVFRKHPDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFI  333 (574)
T ss_pred             hhHHHHHHHHHHHHhccEEEEEecCCch-hhHHHHHhhCCCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEe
Confidence            3455678899999999999999999988 888888888751    24566334445577888999999999999999999


Q ss_pred             eCCcccccccccCCC
Q psy8911          88 DDEERNSHDVSPLGV  102 (280)
Q Consensus        88 ~D~~~~i~aa~~~G~  102 (280)
                      ||++...+-.++-+=
T Consensus       334 DD~p~ErE~vk~~~~  348 (574)
T COG3882         334 DDNPAERELVKRELP  348 (574)
T ss_pred             cCCHHHHHHHHhcCc
Confidence            999999888888665

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=96.21  E-value=0.014  Score=56.93  Aligned_cols=93  Identities=11%  Similarity=0.151  Sum_probs=68.3

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      ++.||+.+.+++||+.|+++.++|.-+. ..++.+-+.+|+.++|-  .....+|. .+-+.+++.|   +-+.|+||..
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~-~TA~aIA~elGId~v~A--~~~PedK~-~iV~~lQ~~G---~~VaMtGDGv  517 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNP-LTAAAIAAEAGVDDFLA--EATPEDKL-ALIRQEQAEG---RLVAMTGDGT  517 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCcEEEc--cCCHHHHH-HHHHHHHHcC---CeEEEECCCc
Confidence            4689999999999999999999999999 89999999999976655  22221221 1333333333   5589999999


Q ss_pred             ccccccccCCCeEEEEcCCCc
Q psy8911          92 RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        92 ~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|.-|-++|.+-...- .|.+
T Consensus       518 NDAPALa~ADVGIAMg-sGTd  537 (679)
T PRK01122        518 NDAPALAQADVGVAMN-SGTQ  537 (679)
T ss_pred             chHHHHHhCCEeEEeC-CCCH
Confidence            9988888877654433 4443

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=96.20  E-value=0.013  Score=57.16  Aligned_cols=93  Identities=11%  Similarity=0.130  Sum_probs=69.3

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      ++.|++.+.+++||+.|+++.++|.-+. ..++.+-+.+|+.++|-  .+...+|. .+-+.+++.|   +-+.|+||..
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~-~TA~aIA~elGI~~v~A--~~~PedK~-~iV~~lQ~~G---~~VaMtGDGv  513 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNE-LTAATIAKEAGVDRFVA--ECKPEDKI-NVIREEQAKG---HIVAMTGDGT  513 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCceEEc--CCCHHHHH-HHHHHHHhCC---CEEEEECCCh
Confidence            6789999999999999999999999999 99999999999987766  33222222 2333334333   5688999999


Q ss_pred             ccccccccCCCeEEEEcCCCc
Q psy8911          92 RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        92 ~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|.-|-++|.+-.. ...+.+
T Consensus       514 NDAPALa~ADVGIA-MgsGTd  533 (673)
T PRK14010        514 NDAPALAEANVGLA-MNSGTM  533 (673)
T ss_pred             hhHHHHHhCCEEEE-eCCCCH
Confidence            99888888876433 334443

>PLN03017 trehalose-phosphatase

Probab=96.18  E-value=0.0099  Score=53.47  Aligned_cols=56  Identities=13%  Similarity=-0.024  Sum_probs=41.8

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN  201 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~  201 (280)
                      -++.+|+||||.+....                 .....+-++..+.|+.|. +|++++|+|+. ....+...+.
T Consensus       112 ~llflD~DGTL~Piv~~-----------------p~~a~i~~~~~~aL~~La-~~~~vaIvSGR-~~~~l~~~~~  167 (366)
T PLN03017        112 IVMFLDYDGTLSPIVDD-----------------PDKAFMSSKMRRTVKKLA-KCFPTAIVTGR-CIDKVYNFVK  167 (366)
T ss_pred             eEEEEecCCcCcCCcCC-----------------cccccCCHHHHHHHHHHh-cCCcEEEEeCC-CHHHHHHhhc
Confidence            36678999999853221                 122356789999999999 77999999999 7777766544

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=96.14  E-value=0.0052  Score=48.47  Aligned_cols=99  Identities=16%  Similarity=0.196  Sum_probs=63.2

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc-cccccceEec-CCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKEIYP-GPKTTHFESLKKATGIEYKDMVFFD  241 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~-~~f~~~~~~~-~~k~~~~~~~~~~~~~~~~~~l~ig  241 (280)
                      ..+-.++...|..++++ .+++-+|.. .....+..-..+.+. -.++.+.+.+ ..|.    .+.+..+++    +||+
T Consensus        71 ~l~~q~v~~~L~~~~e~-~~L~~itar-~~dl~~iT~~~l~~q~ih~~~l~i~g~h~KV----~~vrth~id----lf~e  140 (194)
T COG5663          71 ALLAQLVKQVLPSLKEE-HRLIYITAR-KADLTRITYAWLFIQNIHYDHLEIVGLHHKV----EAVRTHNID----LFFE  140 (194)
T ss_pred             HHHHHHHHHHhHHHHhh-ceeeeeehh-hHHHHHHHHHHHHHhccchhhhhhhcccccc----hhhHhhccC----cccc
Confidence            44557888899999988 567777776 555544433333332 2344443333 3443    445666665    7899


Q ss_pred             CCcCC-cccccccCceEEEECCCCCHHHHHHH
Q psy8911         242 DEERN-SHDVSPLGVTCIHVKKGMSHAVLQKG  272 (280)
Q Consensus       242 D~~~d-i~~a~~aG~~~i~v~~g~~~~~~~~~  272 (280)
                      |+..+ ++.|+++|++++.+...++.....+.
T Consensus       141 d~~~na~~iAk~~~~~vilins~ynRkp~~~n  172 (194)
T COG5663         141 DSHDNAGQIAKNAGIPVILINSPYNRKPAAKN  172 (194)
T ss_pred             ccCchHHHHHHhcCCcEEEecCcccccchHHH
Confidence            98775 66777799999999876655444433

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=96.11  E-value=0.0048  Score=52.31  Aligned_cols=45  Identities=13%  Similarity=0.161  Sum_probs=39.2

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         217 GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       217 ~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      .+|...++.+++++|++++++++|||+.+|+...+.+|... .|.+
T Consensus       158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~i-av~n  202 (236)
T TIGR02471       158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGV-VVGN  202 (236)
T ss_pred             CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEE-EEcC
Confidence            37888999999999999999999999999999999888654 4543

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PLN02423 phosphomannomutase

Probab=96.10  E-value=0.012  Score=50.42  Aligned_cols=53  Identities=13%  Similarity=0.078  Sum_probs=37.8

Q ss_pred             ce-eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911         126 SN-HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       126 ~~-~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      ++ ++.||+||||++.                    ..  .+-+...+.|++|+++ ++++++|+. ........+..
T Consensus         6 ~~~i~~~D~DGTLl~~--------------------~~--~i~~~~~~ai~~l~~~-i~fviaTGR-~~~~~~~~~~~   59 (245)
T PLN02423          6 PGVIALFDVDGTLTAP--------------------RK--EATPEMLEFMKELRKV-VTVGVVGGS-DLSKISEQLGK   59 (245)
T ss_pred             cceEEEEeccCCCcCC--------------------CC--cCCHHHHHHHHHHHhC-CEEEEECCc-CHHHHHHHhcc
Confidence            44 4459999999852                    11  2347789999999977 999999999 65555444443

>KOG2470|consensus

Probab=96.10  E-value=0.0073  Score=53.11  Aligned_cols=94  Identities=14%  Similarity=0.190  Sum_probs=68.7

Q ss_pred             CCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---CCccccccceEec-CCC-------H---------------
Q psy8911         167 YRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNKEIYP-GPK-------T---------------  220 (280)
Q Consensus       167 ~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---gl~~~f~~~~~~~-~~k-------~---------------  220 (280)
                      -|....+|+.|+.+|.++.++||+ +-..++.-+..+   .+.++||.+++.. +|+       |               
T Consensus       242 ~~ql~~fl~kL~~~GKklFLiTNS-PysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdk  320 (510)
T KOG2470|consen  242 NPQLLAFLRKLKDHGKKLFLITNS-PYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDK  320 (510)
T ss_pred             cHHHHHHHHHHHHhcCcEEEEeCC-chhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhh
Confidence            356678899999999999999999 888887766665   4557888654321 110       0               


Q ss_pred             ------------HHHHHHHHHcCCCCCcEEEEeCCcC-Cccccc-ccCceEEEEC
Q psy8911         221 ------------THFESLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVK  261 (280)
Q Consensus       221 ------------~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~-~aG~~~i~v~  261 (280)
                                  ..+...++..|..-.++++|||.+. |+.... +.|+++-++-
T Consensus       321 v~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII  375 (510)
T KOG2470|consen  321 VDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII  375 (510)
T ss_pred             hhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence                        1156677777888999999999998 666665 6888876653

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=96.09  E-value=0.018  Score=54.42  Aligned_cols=81  Identities=20%  Similarity=0.291  Sum_probs=60.4

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      .+.|++.++++.|++.|+++.++|+. ....+..+-+.+|+   |.  ...+..|......+ ++.|   ..+.|+||..
T Consensus       347 ~lr~~~~~~i~~l~~~gi~~~~ltGD-~~~~a~~ia~~lgi---~~--~~~p~~K~~~v~~l-~~~g---~~v~~vGDg~  416 (499)
T TIGR01494       347 PLRDDAKETISELREAGIRVIMLTGD-NVLTAKAIAKELGI---FA--RVTPEEKAALVEAL-QKKG---RVVAMTGDGV  416 (499)
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcCc---ee--ccCHHHHHHHHHHH-HHCC---CEEEEECCCh
Confidence            57799999999999999999999999 89999999999997   11  11112233333333 2323   7799999999


Q ss_pred             CCcccccccCc
Q psy8911         245 RNSHDVSPLGV  255 (280)
Q Consensus       245 ~di~~a~~aG~  255 (280)
                      +|..+-+.|++
T Consensus       417 nD~~al~~Adv  427 (499)
T TIGR01494       417 NDAPALKKADV  427 (499)
T ss_pred             hhHHHHHhCCC
Confidence            99877777653

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=96.05  E-value=0.012  Score=49.89  Aligned_cols=93  Identities=13%  Similarity=0.176  Sum_probs=59.3

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCch--HHHHHHHhhcCccccccccceecC-C----------ChhHHHHHHHH-
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEI--QGAQQLLDLFNWNQYFDHKQIFPG-Q----------KTTHFANLKKA-   76 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--~~~~~~l~~~~l~~~fd~~~i~~~-~----------~~~~~~~~~~~-   76 (280)
                      -++.||+.++++.++++|+.|+++||-+..  +....-|++.|...+ +. .+..+ .          |......+.++ 
T Consensus       114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~-l~lr~~~~~~~~~~~~yK~~~r~~i~~~G  191 (229)
T PF03767_consen  114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DH-LILRPDKDPSKKSAVEYKSERRKEIEKKG  191 (229)
T ss_dssp             GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SC-GEEEEESSTSS------SHHHHHHHHHTT
T ss_pred             CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-ch-hccccccccccccccccchHHHHHHHHcC
Confidence            488999999999999999999999998772  233345666675432 42 22222 1          11224444444 


Q ss_pred             hCCCCccEEEEeCCcccccccccC---CCeEEEEcC
Q psy8911          77 TGIEYKDMVFFDDEERNSHDVSPL---GVTCILVED  109 (280)
Q Consensus        77 ~g~~p~~~l~v~D~~~~i~aa~~~---G~~~i~v~~  109 (280)
                      +.+    +++|||...|+.+++..   |-+.+-+|+
T Consensus       192 y~I----i~~iGD~~~D~~~~~~~~~~~~r~f~lPN  223 (229)
T PF03767_consen  192 YRI----IANIGDQLSDFSGAKTAGARAERWFKLPN  223 (229)
T ss_dssp             EEE----EEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred             CcE----EEEeCCCHHHhhcccccccccceEEEcCC
Confidence            333    88999999999985443   334454444

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=96.00  E-value=0.015  Score=58.68  Aligned_cols=91  Identities=13%  Similarity=0.130  Sum_probs=65.9

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc--ccc-----------------ccceecCCChh---H
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ--YFD-----------------HKQIFPGQKTT---H   69 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~--~fd-----------------~~~i~~~~~~~---~   69 (280)
                      ++.|++.+.+++|+++|+++.++|..+. ..+..+-+.+|+..  ...                 ...+++.-.+.   .
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~-~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~  593 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNE-IVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR  593 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence            6789999999999999999999999999 89999999999852  000                 00122221111   1


Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      +-+.+++.|   +.+.|+||..+|.-|-++|.+-...
T Consensus       594 iV~~lq~~G---~vVam~GDGvNDapALk~AdVGIAm  627 (867)
T TIGR01524       594 IIGLLKKAG---HTVGFLGDGINDAPALRKADVGISV  627 (867)
T ss_pred             HHHHHHhCC---CEEEEECCCcccHHHHHhCCEEEEe
Confidence            334444443   5799999999999988888876443

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>KOG0207|consensus

Probab=95.99  E-value=0.02  Score=56.40  Aligned_cols=78  Identities=10%  Similarity=0.162  Sum_probs=60.8

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      ++.|++...+..||+.|++++++|+- ....++...+++|++..+..  ..+..|.+.++++.+.    ..-+.||||..
T Consensus       723 ~vr~~a~~av~~Lk~~Gi~v~mLTGD-n~~aA~svA~~VGi~~V~ae--v~P~~K~~~Ik~lq~~----~~~VaMVGDGI  795 (951)
T KOG0207|consen  723 QVRPDAALAVAELKSMGIKVVMLTGD-NDAAARSVAQQVGIDNVYAE--VLPEQKAEKIKEIQKN----GGPVAMVGDGI  795 (951)
T ss_pred             ccchhHHHHHHHHHhcCceEEEEcCC-CHHHHHHHHHhhCcceEEec--cCchhhHHHHHHHHhc----CCcEEEEeCCC
Confidence            46799999999999999999999999 88999999999996655542  2334555556555433    36789999999


Q ss_pred             CCccc
Q psy8911         245 RNSHD  249 (280)
Q Consensus       245 ~di~~  249 (280)
                      +|--+
T Consensus       796 NDaPA  800 (951)
T KOG0207|consen  796 NDAPA  800 (951)
T ss_pred             CccHH
Confidence            99443

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=95.96  E-value=0.03  Score=48.06  Aligned_cols=98  Identities=20%  Similarity=0.264  Sum_probs=68.7

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHH---HhhcCcc--cc-cccc--------------------ce-ecC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQL---LDLFNWN--QY-FDHK--------------------QI-FPG   64 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~---l~~~~l~--~~-fd~~--------------------~i-~~~   64 (280)
                      ..-+.+.++++.|+++|+++..+|..+. ......   |+.+|+.  .. |..-                    .| +++
T Consensus        81 lie~~~~~~i~~lq~~~~~v~alT~~~~-~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~  159 (252)
T PF11019_consen   81 LIESDVPNIINSLQNKGIPVIALTARGP-NMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG  159 (252)
T ss_pred             EcchhHHHHHHHHHHCCCcEEEEcCCCh-hhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence            4467899999999999999999999987 554444   4445542  11 1100                    11 111


Q ss_pred             --CChhHHHHHHHHhCCCCccEEEEeCCcccccc----cccCCCeEEEEcCC
Q psy8911          65 --QKTTHFANLKKATGIEYKDMVFFDDEERNSHD----VSPLGVTCILVEDG  110 (280)
Q Consensus        65 --~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~a----a~~~G~~~i~v~~~  110 (280)
                        ++...+...+.++|..|+.+|||||+..++++    +++.|+.-+++.+.
T Consensus       160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt  211 (252)
T PF11019_consen  160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT  211 (252)
T ss_pred             CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence              23334999999999999999999999988654    44578877777554

The function is not known.

>PLN02151 trehalose-phosphatase

Probab=95.96  E-value=0.013  Score=52.51  Aligned_cols=57  Identities=16%  Similarity=0.017  Sum_probs=43.5

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      .++.+|+||||.+...                 ......+-|++.+.|+.|.+ +.+++|+|+. ....+...+.-
T Consensus        99 ~ll~lDyDGTL~PIv~-----------------~P~~A~~~~~~~~aL~~La~-~~~vaIvSGR-~~~~l~~~~~~  155 (354)
T PLN02151         99 IVMFLDYDGTLSPIVD-----------------DPDRAFMSKKMRNTVRKLAK-CFPTAIVSGR-CREKVSSFVKL  155 (354)
T ss_pred             eEEEEecCccCCCCCC-----------------CcccccCCHHHHHHHHHHhc-CCCEEEEECC-CHHHHHHHcCC
Confidence            3678899999986321                 22345677999999999995 4799999999 78877777654

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=95.90  E-value=0.015  Score=48.91  Aligned_cols=88  Identities=11%  Similarity=0.136  Sum_probs=65.5

Q ss_pred             EEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911         184 VAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       184 ~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      =+++|++ ..-.+-...=-++|.++|..-.+++.   .|..-|+.+.+|+|-+.-.-++|||....-++|+..+++++-+
T Consensus       178 NvLVTs~-qLVPaLaKcLLy~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I  256 (274)
T TIGR01658       178 NVLVTSG-QLIPSLAKCLLFRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKI  256 (274)
T ss_pred             EEEEEcC-ccHHHHHHHHHhccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEe
Confidence            4566666 43333333334688999975445543   5567799999999998899999999999999999999999999


Q ss_pred             CCCCCHHHHHHH
Q psy8911         261 KKGMSHAVLQKG  272 (280)
Q Consensus       261 ~~g~~~~~~~~~  272 (280)
                      ..+.+...+..+
T Consensus       257 ~~h~Dl~~l~~a  268 (274)
T TIGR01658       257 DLHPDSSHRFPG  268 (274)
T ss_pred             ecCCCHHHhCcc
Confidence            877666555443

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=95.84  E-value=0.033  Score=57.14  Aligned_cols=41  Identities=15%  Similarity=0.114  Sum_probs=38.2

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      ++.|++++.+++|+++|+++.++|+. .+..+..+.+.+|+.
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd-~~~ta~~ia~~~gi~  608 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGD-HPITAKAIAKGVGII  608 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCC
Confidence            57799999999999999999999999 888999999999984

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PLN02580 trehalose-phosphatase

Probab=95.74  E-value=0.019  Score=52.16  Aligned_cols=58  Identities=14%  Similarity=0.034  Sum_probs=45.2

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      .++.+|+||||.+..                 .......+-+++.+.|+.|.+. .+++|+|+. ....++..+.-.
T Consensus       120 ~~LfLDyDGTLaPIv-----------------~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR-~~~~L~~~l~~~  177 (384)
T PLN02580        120 IALFLDYDGTLSPIV-----------------DDPDRALMSDAMRSAVKNVAKY-FPTAIISGR-SRDKVYELVGLT  177 (384)
T ss_pred             eEEEEecCCccCCCC-----------------CCcccccCCHHHHHHHHHHhhC-CCEEEEeCC-CHHHHHHHhCCC
Confidence            367789999998632                 1233456778999999999998 689999999 888888777643

>KOG0207|consensus

Probab=95.74  E-value=0.03  Score=55.22  Aligned_cols=82  Identities=13%  Similarity=0.223  Sum_probs=62.9

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      ++.|++...+..||+.|++++++|.-.. ..++.+-+..|++.-+-  .+...+|....+.+.+.    -.-+.||||..
T Consensus       723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~-~aA~svA~~VGi~~V~a--ev~P~~K~~~Ik~lq~~----~~~VaMVGDGI  795 (951)
T KOG0207|consen  723 QVRPDAALAVAELKSMGIKVVMLTGDND-AAARSVAQQVGIDNVYA--EVLPEQKAEKIKEIQKN----GGPVAMVGDGI  795 (951)
T ss_pred             ccchhHHHHHHHHHhcCceEEEEcCCCH-HHHHHHHHhhCcceEEe--ccCchhhHHHHHHHHhc----CCcEEEEeCCC
Confidence            5689999999999999999999999999 89999999999555444  44455555555555443    27799999999


Q ss_pred             ccccccccC
Q psy8911          92 RNSHDVSPL  100 (280)
Q Consensus        92 ~~i~aa~~~  100 (280)
                      +|--|-..|
T Consensus       796 NDaPALA~A  804 (951)
T KOG0207|consen  796 NDAPALAQA  804 (951)
T ss_pred             CccHHHHhh
Confidence            995444333

>KOG2961|consensus

Probab=95.59  E-value=0.14  Score=40.02  Aligned_cols=114  Identities=11%  Similarity=0.022  Sum_probs=68.6

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhC-C-cEEEEEcCCCcH-------HHH
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-K-CLVAAASRTSEI-------LHA  196 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~-g-~~~~i~T~~~~~-------~~~  196 (280)
                      .+.+.+|.|.|+.-                     .......|.-..-++.++.. | .-++|+||+-..       +.+
T Consensus        43 ikavVlDKDNcit~---------------------P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~A  101 (190)
T KOG2961|consen   43 IKAVVLDKDNCITA---------------------PYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKA  101 (190)
T ss_pred             ceEEEEcCCCeeeC---------------------CcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHH
Confidence            46889999988842                     22234445555666666643 2 568999987211       112


Q ss_pred             HHHHhhCCCccccccceEecCCCH----HHHHHHHHHc-CCCCCcEEEEeCCcC-CcccccccCceEEEECCCCC
Q psy8911         197 KQILNLINLNQYFSNKEIYPGPKT----THFESLKKAT-GIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       197 ~~~l~~~gl~~~f~~~~~~~~~k~----~~~~~~~~~~-~~~~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~~  265 (280)
                      ...-.+.||.=     .-.+.-||    +.+.+....- =..++|++||||.+. ||.-|...|--.++...|..
T Consensus       102 k~le~k~gIpV-----lRHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~  171 (190)
T KOG2961|consen  102 KALEAKIGIPV-----LRHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR  171 (190)
T ss_pred             HHHHHhhCCce-----EeecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence            22222233321     11122233    3333332211 278999999999987 99999999999999988763

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=95.59  E-value=0.033  Score=55.39  Aligned_cols=95  Identities=8%  Similarity=0.011  Sum_probs=67.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc-ccc-----------------------cceecCCCh
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY-FDH-----------------------KQIFPGQKT   67 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~-fd~-----------------------~~i~~~~~~   67 (280)
                      ++.|++.+.++.|++.|+++.++|..+. ..++.+-+.+|+.+. +..                       ..++..-.+
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P  520 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHL-AIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP  520 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence            6789999999999999999999999999 899999999998641 100                       012222222


Q ss_pred             hH---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          68 TH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        68 ~~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ..   +-+.+++.   -+-+.|+||..+|.-|-++|.+-.. +..+.
T Consensus       521 e~K~~iV~~lq~~---G~~VamvGDGvNDapAL~~AdVGIA-m~~gt  563 (755)
T TIGR01647       521 EHKYEIVEILQKR---GHLVGMTGDGVNDAPALKKADVGIA-VAGAT  563 (755)
T ss_pred             HHHHHHHHHHHhc---CCEEEEEcCCcccHHHHHhCCeeEE-ecCCc
Confidence            21   33334443   3679999999999888888776533 33443

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=95.58  E-value=0.093  Score=45.80  Aligned_cols=44  Identities=14%  Similarity=0.131  Sum_probs=38.2

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF   56 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f   56 (280)
                      ..++.+.+.|++|+++|++++++|+... ..++.+.+.+++..+|
T Consensus        18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~-~ev~~l~~~Lgl~~p~   61 (302)
T PRK12702         18 NSYGAARQALAALERRSIPLVLYSLRTR-AQLEHLCRQLRLEHPF   61 (302)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHhCCCCeE
Confidence            3566799999999999999999999999 7888899999986543

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=95.57  E-value=0.022  Score=56.47  Aligned_cols=61  Identities=20%  Similarity=0.127  Sum_probs=46.4

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhh-CCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKE-NKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~-~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      +++.||+||||++....                 .....+-+.+.+.|+.|.+ .|+.++|+|+. ....++..+..+++
T Consensus       493 rLi~~D~DGTL~~~~~~-----------------~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR-~~~~l~~~~~~~~l  554 (726)
T PRK14501        493 RLLLLDYDGTLVPFAPD-----------------PELAVPDKELRDLLRRLAADPNTDVAIISGR-DRDTLERWFGDLPI  554 (726)
T ss_pred             eEEEEecCccccCCCCC-----------------cccCCCCHHHHHHHHHHHcCCCCeEEEEeCC-CHHHHHHHhCCCCe
Confidence            57899999999863211                 1123456889999999999 59999999999 88888877775543

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=95.54  E-value=0.0096  Score=50.03  Aligned_cols=37  Identities=16%  Similarity=0.245  Sum_probs=34.2

Q ss_pred             HHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          69 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        69 ~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      .++.+++.+|++++++++|||+.+|+..++.+|...+
T Consensus       161 al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va  197 (230)
T PRK01158        161 GLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVA  197 (230)
T ss_pred             HHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEE
Confidence            3899999999999999999999999999999998654

>KOG1605|consensus

Probab=95.52  E-value=0.0089  Score=51.23  Aligned_cols=145  Identities=15%  Similarity=0.123  Sum_probs=90.5

Q ss_pred             cceeEEEecCCCCCCcccc-cc-c-CcccccCCeeEcc--CCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHH
Q psy8911         125 ISNHLSKKLDYTLWPLHVH-DL-V-APFKKIGQKVMDA--KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQI  199 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~-~~-~-~~~~~~~~~~~~~--~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~  199 (280)
                      ..++++.|+|.||..+... +. . +.|..  ...++.  +.-.+...|++.++|....+. +.+.+.|.+ ...++..+
T Consensus        88 ~kk~lVLDLDeTLvHss~~~~~~~~~d~~~--~v~~~~~~~~~yV~kRP~vdeFL~~~s~~-~e~v~FTAs-~~~Ya~~v  163 (262)
T KOG1605|consen   88 GRKTLVLDLDETLVHSSLNLKPIVNADFTV--PVEIDGHIHQVYVRKRPHVDEFLSRVSKW-YELVLFTAS-LEVYADPL  163 (262)
T ss_pred             CCceEEEeCCCcccccccccCCCCCcceee--eeeeCCcceEEEEEcCCCHHHHHHHhHHH-HHHHHHHhh-hHHHHHHH
Confidence            4478999999999876632 11 0 00100  011111  222467789999999998887 899999999 88899888


Q ss_pred             HhhCCC-ccccccceEecC--CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHHHHHH
Q psy8911         200 LNLINL-NQYFSNKEIYPG--PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGL  273 (280)
Q Consensus       200 l~~~gl-~~~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~  273 (280)
                      +..+.= ...|......+.  .+...|-+=+...+-+..++++|+|++.....=-.-|++.--.-.+....+|.+.+
T Consensus       164 ~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL~Ll  240 (262)
T KOG1605|consen  164 LDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELLKLL  240 (262)
T ss_pred             HHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHHHHHHH
Confidence            888764 222321100000  11222322235567788999999999997555555777766666666666655543

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=95.50  E-value=0.023  Score=57.56  Aligned_cols=95  Identities=12%  Similarity=0.152  Sum_probs=66.9

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc-------cc------------ccceecCCChhH---
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY-------FD------------HKQIFPGQKTTH---   69 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~-------fd------------~~~i~~~~~~~~---   69 (280)
                      ++.|++.+.++.|+++|+++.++|.-+. ..+..+-+.+|+..-       ++            ...+++.-.+..   
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~  628 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNP-IVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR  628 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence            6789999999999999999999999999 899999999998520       00            001222222221   


Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +-+.+++.|   +-+.|+||..+|.-|-++|-+-. .+..+.
T Consensus       629 iV~~Lq~~G---~vVamtGDGvNDaPALk~ADVGI-Amg~gt  666 (903)
T PRK15122        629 VLKALQANG---HTVGFLGDGINDAPALRDADVGI-SVDSGA  666 (903)
T ss_pred             HHHHHHhCC---CEEEEECCCchhHHHHHhCCEEE-EeCccc
Confidence            334444433   56999999999988888877653 333443

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=95.49  E-value=0.024  Score=48.67  Aligned_cols=42  Identities=12%  Similarity=0.052  Sum_probs=37.1

Q ss_pred             CCHHHHHHHHHHcCCC--CCcEEEEeCCcCCcccccccCceEEE
Q psy8911         218 PKTTHFESLKKATGIE--YKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~--~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      .|...+..+++++|++  ++++++|||+.+|+...+.+|..++.
T Consensus       176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam  219 (256)
T TIGR01486       176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV  219 (256)
T ss_pred             CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe
Confidence            6667799999999999  99999999999999999988876443

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=95.39  E-value=0.02  Score=48.97  Aligned_cols=45  Identities=13%  Similarity=0.127  Sum_probs=39.4

Q ss_pred             ChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          66 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        66 ~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      |....+.+++.+|+++++|++|||+.+|+...+.++..++.+.+.
T Consensus       168 K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na  212 (249)
T TIGR01485       168 KGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA  212 (249)
T ss_pred             hHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence            333489999999999999999999999999999988888888654

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PRK10976 putative hydrolase; Provisional

Probab=95.37  E-value=0.011  Score=51.02  Aligned_cols=45  Identities=22%  Similarity=0.280  Sum_probs=39.4

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      .|...++.+++++|+++++++.|||+.+|++.-+.+|.. +++.++
T Consensus       190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~-vAm~NA  234 (266)
T PRK10976        190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKG-CIMGNA  234 (266)
T ss_pred             ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCC-eeecCC
Confidence            677889999999999999999999999999999999985 444443

>TIGR00685 T6PP trehalose-phosphatase

Probab=95.33  E-value=0.018  Score=49.14  Aligned_cols=44  Identities=11%  Similarity=0.055  Sum_probs=39.5

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCccccccc-------CceEEEEC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPL-------GVTCIHVK  261 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~a-------G~~~i~v~  261 (280)
                      .|...+..+++++++++.+++||||+.+|+.+++.+       |..++.|.
T Consensus       167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~  217 (244)
T TIGR00685       167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG  217 (244)
T ss_pred             CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence            556889999999999999999999999999999988       77888884

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=95.31  E-value=0.054  Score=55.28  Aligned_cols=89  Identities=10%  Similarity=0.122  Sum_probs=65.1

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc---------cc------------ccceecCCChhH-
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY---------FD------------HKQIFPGQKTTH-   69 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~---------fd------------~~~i~~~~~~~~-   69 (280)
                      ++.|++.+.++.|+++|+++.++|.-+. ..+..+-+.+|+..-         |+            ...+++.-.+.. 
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~-~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K  657 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNI-DTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK  657 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCh-HHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence            6789999999999999999999999999 899999999998521         11            112333322222 


Q ss_pred             --HHHHHHHhCCCCccEEEEeCCcccccccccCCCeE
Q psy8911          70 --FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC  104 (280)
Q Consensus        70 --~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~  104 (280)
                        +-..+++.|   +-+.|+||..+|.-|-++|-+-.
T Consensus       658 ~~iV~~lq~~g---~vVam~GDGvNDapALk~AdVGI  691 (941)
T TIGR01517       658 QLLVLMLKDMG---EVVAVTGDGTNDAPALKLADVGF  691 (941)
T ss_pred             HHHHHHHHHCC---CEEEEECCCCchHHHHHhCCcce
Confidence              344444443   47999999999988888776543

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=95.22  E-value=0.047  Score=55.34  Aligned_cols=90  Identities=16%  Similarity=0.124  Sum_probs=64.6

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc-------cc------------ccceecCCChhH---
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY-------FD------------HKQIFPGQKTTH---   69 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~-------fd------------~~~i~~~~~~~~---   69 (280)
                      ++.|++.+.++.|+++|+++.++|.-+. ..+..+-+.+|+.+-       ++            ...++..-.+..   
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~-~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~  628 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSE-LVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKER  628 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHH
Confidence            6789999999999999999999999999 899999999999520       00            001222222221   


Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      .-+.+++.   -+-+.|+||..+|.-|-++|.+-..
T Consensus       629 IV~~Lq~~---G~vVam~GDGvNDaPALk~ADVGIA  661 (902)
T PRK10517        629 IVTLLKRE---GHVVGFMGDGINDAPALRAADIGIS  661 (902)
T ss_pred             HHHHHHHC---CCEEEEECCCcchHHHHHhCCEEEE
Confidence            33333433   3568999999999888888776544

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=95.14  E-value=0.066  Score=45.48  Aligned_cols=101  Identities=11%  Similarity=0.106  Sum_probs=59.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC--------------CChhH-HH--
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG--------------QKTTH-FA--   71 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~--------------~~~~~-~~--   71 (280)
                      ..+.+++|+.++++.|+++++|+.|.|.+-. +..+.+|+..+  .+++.+.|++.              .+.-+ |.  
T Consensus        87 s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlg-dvI~~vL~q~~--~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn  163 (246)
T PF05822_consen   87 SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLG-DVIEEVLRQAG--VFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKN  163 (246)
T ss_dssp             S---B-BTHHHHHHHHHCTT--EEEEEEEEH-HHHHHHHHHTT----BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HH
T ss_pred             cchhhhcCHHHHHHHHHhcCCCEEEEeCCcH-HHHHHHHHHcC--CCCCCeEEEeeeEEECCcceEeecCCCceEEeeCC
Confidence            3578999999999999999999999999999 99999999985  34454444432              11111 11  


Q ss_pred             -HHHH---Hh-CC-CCccEEEEeCCcccccccccC-CCe---EEEEcCCCc
Q psy8911          72 -NLKK---AT-GI-EYKDMVFFDDEERNSHDVSPL-GVT---CILVEDGMT  112 (280)
Q Consensus        72 -~~~~---~~-g~-~p~~~l~v~D~~~~i~aa~~~-G~~---~i~v~~~~~  112 (280)
                       .+++   .. .+ .-.+++.+|||.-|+..|.-. ...   .|++.+...
T Consensus       164 ~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~v  214 (246)
T PF05822_consen  164 ESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKV  214 (246)
T ss_dssp             HHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSH
T ss_pred             cccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCH
Confidence             1221   01 22 457899999999998887665 332   444444443

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=95.01  E-value=0.044  Score=55.03  Aligned_cols=57  Identities=16%  Similarity=0.063  Sum_probs=43.7

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHH-hhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYL-KENKCLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L-~~~g~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      .+++.+|+||||++...                   ....+-|++.++|+.| ++.|..++|+|+. ....++..+..
T Consensus       596 ~rlI~LDyDGTLlp~~~-------------------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR-~~~~L~~~f~~  653 (854)
T PLN02205        596 TRAILLDYDGTLMPQAS-------------------IDKSPSSKSIDILNTLCRDKNNMVFIVSAR-SRKTLADWFSP  653 (854)
T ss_pred             CeEEEEecCCcccCCcc-------------------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCC-CHHHHHHHhCC
Confidence            46889999999986311                   0234557899999997 7789999999999 78777777644

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=94.91  E-value=0.055  Score=46.65  Aligned_cols=63  Identities=14%  Similarity=0.071  Sum_probs=47.9

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHHHHHhhC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      ...++.+|+||||.+...                 +.....+.+++.++|+.|..+. .-++|+|+. +....+..+.-.
T Consensus        17 ~~~~~~lDyDGTl~~i~~-----------------~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR-~~~~l~~~~~v~   78 (266)
T COG1877          17 RKRLLFLDYDGTLTEIVP-----------------HPEAAVPDDRLLSLLQDLASDPRNVVAIISGR-SLAELERLFGVP   78 (266)
T ss_pred             cceEEEEecccccccccc-----------------CccccCCCHHHHHHHHHHHhcCCCeEEEEeCC-CHHHHHHhcCCC
Confidence            346889999999976322                 2334678899999999999883 359999999 888888777754


Q ss_pred             CC
Q psy8911         204 NL  205 (280)
Q Consensus       204 gl  205 (280)
                      ++
T Consensus        79 ~i   80 (266)
T COG1877          79 GI   80 (266)
T ss_pred             Cc
Confidence            44

>KOG2134|consensus

Probab=94.82  E-value=0.11  Score=46.61  Aligned_cols=109  Identities=18%  Similarity=0.184  Sum_probs=66.9

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc-----------HHH
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE-----------ILH  195 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~-----------~~~  195 (280)
                      +.+.||+||||++.......+          ....+...++|.+..=|+.|.+.||+++|.||...           +..
T Consensus        76 K~i~FD~dgtlI~t~sg~vf~----------~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~K  145 (422)
T KOG2134|consen   76 KIIMFDYDGTLIDTKSGKVFP----------KGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKK  145 (422)
T ss_pred             ceEEEecCCceeecCCcceee----------ccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHH
Confidence            678999999999854432210          11122345789999999999999999999999732           112


Q ss_pred             HHHHHhhCCCc-cccccc--eEecCCCHHHHHHHHHHc----CCCCCcEEEEeCCcC
Q psy8911         196 AKQILNLINLN-QYFSNK--EIYPGPKTTHFESLKKAT----GIEYKDMVFFDDEER  245 (280)
Q Consensus       196 ~~~~l~~~gl~-~~f~~~--~~~~~~k~~~~~~~~~~~----~~~~~~~l~igD~~~  245 (280)
                      ++.+...+++. ..+...  ..+..|-..+.....+..    .+.-..++|+||-..
T Consensus       146 i~~i~anl~vPi~~~~A~~~~~yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaag  202 (422)
T KOG2134|consen  146 IKAIVANLGVPIQLLAAIIKGKYRKPSTGMWEFLKRLENDSVEISEKASIFVGDAAG  202 (422)
T ss_pred             HHHHHHhcCCceEEeeeccCCcccCcchhHHHHHHHHhhccceeeechhhhhhhhcc
Confidence            34445555443 112111  112235556666665554    366667779998655

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=94.79  E-value=0.096  Score=54.03  Aligned_cols=90  Identities=8%  Similarity=-0.061  Sum_probs=64.7

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-c-------ccc-----------------------
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-D-------HKQ-----------------------   60 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d-------~~~-----------------------   60 (280)
                      ++.|++.+.++.|+++|+++.++|..+. ..+..+-+.+|+.+-. .       ...                       
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~-~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~  724 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFP-ETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL  724 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence            6789999999999999999999999999 8999999999985321 0       001                       


Q ss_pred             eecCCChhH---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          61 IFPGQKTTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        61 i~~~~~~~~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      +++.-.+..   +-..+++.   -+-+.|+||+.+|.-+-++|.+-..
T Consensus       725 V~ar~sP~~K~~iV~~lq~~---g~~Vam~GDGvNDapaLk~AdVGIA  769 (1053)
T TIGR01523       725 VIARCAPQTKVKMIEALHRR---KAFCAMTGDGVNDSPSLKMANVGIA  769 (1053)
T ss_pred             EEEecCHHHHHHHHHHHHhc---CCeeEEeCCCcchHHHHHhCCccEe
Confidence            222211111   33333333   4578999999999888888876544

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.79  E-value=0.11  Score=47.64  Aligned_cols=97  Identities=14%  Similarity=0.140  Sum_probs=75.0

Q ss_pred             ceecC--CHHHHHHHHHHCCceEEEecCCCch-HHHHHHHhhcCccccccccceecCCChh-------HHHHHHHHhCCC
Q psy8911          11 IKYYP--DVPGILKYLKQNNCLVAAASRTSEI-QGAQQLLDLFNWNQYFDHKQIFPGQKTT-------HFANLKKATGIE   80 (280)
Q Consensus        11 ~~~~~--g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~~~l~~~~l~~~fd~~~i~~~~~~~-------~~~~~~~~~g~~   80 (280)
                      ..+||  ...++.+.+.+.|.++.++|...-| ...+.+|..+|...  ..+.++.|.+..       .|..+++.-+++
T Consensus        96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~--~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd  173 (635)
T COG5610          96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDF--NNIPIYMSSEFRLKKNSGNLFKAVLKLENVD  173 (635)
T ss_pred             eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCc--cCceeeecceeehhcccchHHHHHHhhcCCC
Confidence            34555  5679999999999999999998543 66778888888432  223455554322       299999999999


Q ss_pred             CccEEEEeCCc-ccccccccCCCeEEEEcC
Q psy8911          81 YKDMVFFDDEE-RNSHDVSPLGVTCILVED  109 (280)
Q Consensus        81 p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~  109 (280)
                      |.+.+.+||.. .|...++++|+.|.+..+
T Consensus       174 ~~~w~H~GDN~~aD~l~pk~LgI~Tlf~~s  203 (635)
T COG5610         174 PKKWIHCGDNWVADYLKPKNLGISTLFYIS  203 (635)
T ss_pred             hhheEEecCchhhhhcCccccchhHHHHHH
Confidence            99999999986 489999999999987633

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=94.71  E-value=0.049  Score=47.18  Aligned_cols=40  Identities=13%  Similarity=0.107  Sum_probs=35.7

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN   53 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~   53 (280)
                      ..+...+.|++|+++|++++++|..+. ..++..++.+++.
T Consensus        25 i~~~~~~ai~~l~~~Gi~~viaTGR~~-~~i~~~~~~l~~~   64 (271)
T PRK03669         25 DWQPAAPWLTRLREAQVPVILCSSKTA-AEMLPLQQTLGLQ   64 (271)
T ss_pred             CcHHHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHhCCC
Confidence            345688999999999999999999999 8888999999874

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=94.65  E-value=0.12  Score=53.44  Aligned_cols=41  Identities=12%  Similarity=0.098  Sum_probs=38.5

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      ++.|++.+.++.|+++|+++.++|+- .+..+..+.+.+||.
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD-~~~TA~~iA~~~gii  696 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGD-NPLTAVHVARECGIV  696 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCC
Confidence            57899999999999999999999999 899999999999994

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>KOG2961|consensus

Probab=94.62  E-value=0.23  Score=38.74  Aligned_cols=98  Identities=13%  Similarity=0.149  Sum_probs=63.7

Q ss_pred             CCcceecCCHHHHHHHHHHC-C-ceEEEecCCCch-------HHHHHHHhhcCccccccccceecC--CChhHHHHHHH-
Q psy8911           8 GAHIKYYPDVPGILKYLKQN-N-CLVAAASRTSEI-------QGAQQLLDLFNWNQYFDHKQIFPG--QKTTHFANLKK-   75 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~-g-~~~~i~Sn~~~~-------~~~~~~l~~~~l~~~fd~~~i~~~--~~~~~~~~~~~-   75 (280)
                      ..+....|..+.-++.+++. | ..++++||+...       +.+..+-.+.|+       .++-.  .++.--....+ 
T Consensus        57 P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gI-------pVlRHs~kKP~ct~E~~~y  129 (190)
T KOG2961|consen   57 PYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGI-------PVLRHSVKKPACTAEEVEY  129 (190)
T ss_pred             CcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCC-------ceEeecccCCCccHHHHHH
Confidence            34556678888888888876 3 679999998651       122223333332       22222  12221222222 


Q ss_pred             HhC----CCCccEEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911          76 ATG----IEYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        76 ~~g----~~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      .+|    ..++|.+||||+. .||--|...|.-+||..++..
T Consensus       130 ~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~  171 (190)
T KOG2961|consen  130 HFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR  171 (190)
T ss_pred             HhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence            234    7999999999996 599999999999999988754

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=94.59  E-value=0.028  Score=44.97  Aligned_cols=100  Identities=10%  Similarity=0.046  Sum_probs=67.1

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHH----HHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCc
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG----AQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYK   82 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~----~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~   82 (280)
                      +.+..-|..=+++||..=.++|=.++.+|.... -.    ...+-+.+.+...-.  .++.+++...++.-.-..=.+-.
T Consensus       109 ~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~-gk~d~vsk~Lak~F~i~~m~p--v~f~Gdk~k~~qy~Kt~~i~~~~  185 (237)
T COG3700         109 WDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTP-GKTDTVSKTLAKNFHITNMNP--VIFAGDKPKPGQYTKTQWIQDKN  185 (237)
T ss_pred             CccccchHHHHHHHHHHHHhcCCeEEEEecCCC-CcccccchhHHhhcccCCCcc--eeeccCCCCcccccccHHHHhcC
Confidence            344444455678899999999999999997655 22    233445567766666  77777766432211111112333


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      --++-|||-.||.||+.+|++.|-+..
T Consensus       186 ~~IhYGDSD~Di~AAkeaG~RgIRilR  212 (237)
T COG3700         186 IRIHYGDSDNDITAAKEAGARGIRILR  212 (237)
T ss_pred             ceEEecCCchhhhHHHhcCccceeEEe
Confidence            468899999999999999999998743

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=94.54  E-value=0.065  Score=45.50  Aligned_cols=89  Identities=19%  Similarity=0.162  Sum_probs=53.3

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc----------cccc--c-eEecCCCHHHH---HHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ----------YFSN--K-EIYPGPKTTHF---ESL  226 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~----------~f~~--~-~~~~~~k~~~~---~~~  226 (280)
                      .+.+.+|+.++++.|+++++|+.|.|.+ -.+.++..|++.+...          .||.  . ..+.+|-...|   ..+
T Consensus        88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAG-lgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~  166 (246)
T PF05822_consen   88 DIMLRDGVEEFFDKLEEHNIPLLIFSAG-LGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA  166 (246)
T ss_dssp             ---B-BTHHHHHHHHHCTT--EEEEEEE-EHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred             chhhhcCHHHHHHHHHhcCCCEEEEeCC-cHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence            4778899999999999999999999999 8999999999986531          2221  1 11122211111   111


Q ss_pred             H------HHcCCCCCcEEEEeCCcCCccccccc
Q psy8911         227 K------KATGIEYKDMVFFDDEERNSHDVSPL  253 (280)
Q Consensus       227 ~------~~~~~~~~~~l~igD~~~di~~a~~a  253 (280)
                      +      ++ --...+++..||+.-|+..|...
T Consensus       167 l~~~~~~~~-~~~R~NvlLlGDslgD~~Ma~G~  198 (246)
T PF05822_consen  167 LEDSPYFKQ-LKKRTNVLLLGDSLGDLHMADGV  198 (246)
T ss_dssp             HTTHHHHHC-TTT--EEEEEESSSGGGGTTTT-
T ss_pred             ccCchHHHH-hccCCcEEEecCccCChHhhcCC
Confidence            1      11 12467899999999998888776

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=94.43  E-value=0.022  Score=49.32  Aligned_cols=44  Identities=16%  Similarity=0.269  Sum_probs=38.7

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      .|...++.+++++|+++++++.|||+.+|+..-+.+|.. +.+.+
T Consensus       188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~N  231 (272)
T PRK15126        188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRG-FIMGN  231 (272)
T ss_pred             ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCc-eeccC
Confidence            677889999999999999999999999999999999874 44444

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=94.43  E-value=0.07  Score=44.43  Aligned_cols=41  Identities=17%  Similarity=0.165  Sum_probs=35.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      ..++.||+.++++.|.++ ++-.|+|.+ ..+++++...++|+
T Consensus        81 sa~lvPgA~etm~~l~~~-~tp~v~STS-Y~qy~~r~a~~ig~  121 (315)
T COG4030          81 SAKLVPGAEETMATLQER-WTPVVISTS-YTQYLRRTASMIGV  121 (315)
T ss_pred             hcccCCChHHHHHHHhcc-CCceEEecc-HHHHHHHHHHhcCC
Confidence            367899999999999988 666777777 78899999998888

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=94.34  E-value=0.16  Score=51.73  Aligned_cols=96  Identities=10%  Similarity=0.017  Sum_probs=68.4

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc------ccc-----------------eEecCCCHH
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF------SNK-----------------EIYPGPKTT  221 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f------~~~-----------------~~~~~~k~~  221 (280)
                      +|.+++++.++.|+++|+++.++|+- .+..+..+-+++|+..--      ++.                 .++..-.|+
T Consensus       547 ppr~~v~~aI~~l~~AGI~v~MiTGD-~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~  625 (917)
T COG0474         547 PPREDVKEAIEELREAGIKVWMITGD-HVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE  625 (917)
T ss_pred             CCCccHHHHHHHHHHCCCcEEEECCC-CHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence            68899999999999999999999999 999999999999976332      110                 112222333


Q ss_pred             HHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         222 HFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       222 ~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      +=..+.+.++=.-+-+.|.||..||.-+-|+|.+-.....
T Consensus       626 qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~  665 (917)
T COG0474         626 QKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG  665 (917)
T ss_pred             HHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc
Confidence            3233333333335678899999999999998866554443

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=94.34  E-value=0.12  Score=44.63  Aligned_cols=52  Identities=25%  Similarity=0.353  Sum_probs=47.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK   66 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~   66 (280)
                      -.-|.+.+-|..|+++|.-+++=|.+.+ +++..-++.++|.+|||  .+++++.
T Consensus       142 Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~-eHV~~sl~~~~L~~~Fd--~ii~~G~  193 (297)
T PF05152_consen  142 IRDPAVYDSLRELKEQGCVLVLWSYGNR-EHVRHSLKELKLEGYFD--IIICGGN  193 (297)
T ss_pred             cCChHHHHHHHHHHHcCCEEEEecCCCH-HHHHHHHHHhCCccccE--EEEeCCc
Confidence            3568999999999999999999999999 99999999999999999  7777653

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=94.34  E-value=0.21  Score=41.12  Aligned_cols=84  Identities=13%  Similarity=0.079  Sum_probs=57.0

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc--ccccceecCC--------C-----hhHHHHHH
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY--FDHKQIFPGQ--------K-----TTHFANLK   74 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~--fd~~~i~~~~--------~-----~~~~~~~~   74 (280)
                      .+-..|++.++|+.+.+ .|.++|-|++.. ..++.++..+++...  +....+..+.        .     +.....+-
T Consensus        43 ~~~kRP~l~eFL~~~~~-~feIvVwTAa~~-~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw  120 (195)
T TIGR02245        43 EELMRPYLHEFLTSAYE-DYDIVIWSATSM-KWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIW  120 (195)
T ss_pred             eEEeCCCHHHHHHHHHh-CCEEEEEecCCH-HHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhh
Confidence            35679999999999999 599999999999 999999998875321  1100111110        0     11133333


Q ss_pred             HHhC--CCCccEEEEeCCccccc
Q psy8911          75 KATG--IEYKDMVFFDDEERNSH   95 (280)
Q Consensus        75 ~~~g--~~p~~~l~v~D~~~~i~   95 (280)
                      +.+|  .+++++|+|||++....
T Consensus       121 ~~l~~~~~~~ntiiVDd~p~~~~  143 (195)
T TIGR02245       121 ALLPEFYSMKNTIMFDDLRRNFL  143 (195)
T ss_pred             hhcccCCCcccEEEEeCCHHHHh
Confidence            3454  38899999999987744

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=94.17  E-value=0.17  Score=52.08  Aligned_cols=41  Identities=10%  Similarity=-0.015  Sum_probs=38.2

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN   53 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~   53 (280)
                      +|.|++.+.++.|+++|+++.++|..+. ..+..+.+.+|+.
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~-~ta~~ia~~~gi~  608 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHP-ITAKAIAKGVGII  608 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCC
Confidence            6789999999999999999999999999 8999999999884

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=93.94  E-value=0.064  Score=45.42  Aligned_cols=55  Identities=20%  Similarity=0.091  Sum_probs=31.1

Q ss_pred             EEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHHHHHhh
Q psy8911         130 SKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       130 ~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      .+|+||||.+....                 .....+.+++.++|+.|.+.. ..++|+|+. .....+.....
T Consensus         1 ~lDyDGTL~p~~~~-----------------p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR-~~~~~~~~~~~   56 (235)
T PF02358_consen    1 FLDYDGTLAPIVDD-----------------PDAAVPPPELRELLRALAADPNNTVAIVSGR-SLDDLERFGGI   56 (235)
T ss_dssp             EEE-TTTSS---S------------------GGG----HHHHHHHHHHHHHSE--EEEE-SS--HHHHHHH-S-
T ss_pred             CcccCCccCCCCCC-----------------ccccCCCHHHHHHHHHHhccCCCEEEEEEeC-CHHHhHHhcCC
Confidence            47999999864322                 234567899999999998773 469999999 66665555433

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=93.92  E-value=0.19  Score=47.62  Aligned_cols=82  Identities=10%  Similarity=0.128  Sum_probs=60.5

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      ++.|++.+.++.|++.|+++.++|..+. ..+..+-+.+|+   |-  . ....+...+-..+++.|   ..+.|+||..
T Consensus       347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~-~~a~~ia~~lgi---~~--~-~~p~~K~~~v~~l~~~g---~~v~~vGDg~  416 (499)
T TIGR01494       347 PLRDDAKETISELREAGIRVIMLTGDNV-LTAKAIAKELGI---FA--R-VTPEEKAALVEALQKKG---RVVAMTGDGV  416 (499)
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCc---ee--c-cCHHHHHHHHHHHHHCC---CEEEEECCCh
Confidence            6789999999999999999999999999 889999888886   21  1 11111112223333333   7799999999


Q ss_pred             ccccccccCCCe
Q psy8911          92 RNSHDVSPLGVT  103 (280)
Q Consensus        92 ~~i~aa~~~G~~  103 (280)
                      +|..+-+.+..-
T Consensus       417 nD~~al~~Advg  428 (499)
T TIGR01494       417 NDAPALKKADVG  428 (499)
T ss_pred             hhHHHHHhCCCc
Confidence            998777776643

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=93.91  E-value=0.036  Score=45.64  Aligned_cols=36  Identities=14%  Similarity=0.211  Sum_probs=33.4

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      .+.++++++++++++++|||+.+|+.+++.+|+..+
T Consensus       168 ~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       168 LQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence            899999999999999999999999999999988653

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=93.66  E-value=0.3  Score=42.11  Aligned_cols=99  Identities=9%  Similarity=0.076  Sum_probs=61.7

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHH---HHHHHhhcCccccccccceec-CCC-----hhHHHHHHHH--hC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG---AQQLLDLFNWNQYFDHKQIFP-GQK-----TTHFANLKKA--TG   78 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~---~~~~l~~~~l~~~fd~~~i~~-~~~-----~~~~~~~~~~--~g   78 (280)
                      ..++.|+++++.+.|+++|+++.++|+-+. ..   ...-|++.|+..+ +. .+.- ..+     ...|+.-.++  ..
T Consensus       143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e-~~r~aT~~NL~kaGy~~~-~~-LiLR~~~D~~~~~av~yKs~~R~~li~  219 (275)
T TIGR01680       143 EAPALPETLKNYNKLVSLGFKIIFLSGRLK-DKQAVTEANLKKAGYHTW-EK-LILKDPQDNSAENAVEYKTAARAKLIQ  219 (275)
T ss_pred             cCCCChHHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHHHHHcCCCCc-ce-eeecCCCCCccchhHHHHHHHHHHHHH
Confidence            567899999999999999999999999987 33   3334555566433 42 2222 111     1124433221  11


Q ss_pred             CCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ---.=...|||..+|+.+....+-++.-+|++.
T Consensus       220 eGYrIv~~iGDq~sDl~G~~~g~~RtFKLPNP~  252 (275)
T TIGR01680       220 EGYNIVGIIGDQWNDLKGEHRGAIRSFKLPNPC  252 (275)
T ss_pred             cCceEEEEECCCHHhccCCCccCcceecCCCcc
Confidence            112225778999999976663346777777663

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=93.48  E-value=0.18  Score=43.20  Aligned_cols=76  Identities=16%  Similarity=0.091  Sum_probs=52.2

Q ss_pred             HHHHHHHHhhCCcEEEEE-cCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcc
Q psy8911         170 VPEILRYLKENKCLVAAA-SRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSH  248 (280)
Q Consensus       170 ~~~~L~~L~~~g~~~~i~-T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~  248 (280)
                      +.++-+.|+.+|..+-++ |++                .++|.+ -....|...++.+++++++++++++++|||.+|+.
T Consensus       133 ~~~i~~~l~~~~l~~~~i~s~~----------------~~ldil-P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~  195 (247)
T PF05116_consen  133 LEEIRARLRQRGLRVNVIYSNG----------------RDLDIL-PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLE  195 (247)
T ss_dssp             HHHHHHHHHCCTCEEEEEECTC----------------CEEEEE-ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHH
T ss_pred             HHHHHHHHHHcCCCeeEEEccc----------------eeEEEc-cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHH
Confidence            344446678888887655 443                134421 11236778899999999999999999999999976


Q ss_pred             cccccCceEEEECCC
Q psy8911         249 DVSPLGVTCIHVKKG  263 (280)
Q Consensus       249 ~a~~aG~~~i~v~~g  263 (280)
                      .- ..+...|.|.+.
T Consensus       196 mL-~~~~~~vvV~Na  209 (247)
T PF05116_consen  196 ML-EGGDHGVVVGNA  209 (247)
T ss_dssp             HH-CCSSEEEE-TTS
T ss_pred             HH-cCcCCEEEEcCC
Confidence            65 777888888764

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=93.41  E-value=0.06  Score=45.39  Aligned_cols=41  Identities=10%  Similarity=-0.027  Sum_probs=36.3

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ   54 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~   54 (280)
                      ..|.+.+.|++|+++|+++.++|+.+. ..+..+++.+++.+
T Consensus        16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~-~~~~~~~~~lg~~~   56 (225)
T TIGR02461        16 EPGPAREALEELKDLGFPIVFVSSKTR-AEQEYYREELGVEP   56 (225)
T ss_pred             CchHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCCC
Confidence            456799999999999999999999999 77888889999754

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK05752 uroporphyrinogen-III synthase; Validated

Probab=93.41  E-value=0.61  Score=39.98  Aligned_cols=98  Identities=8%  Similarity=-0.009  Sum_probs=59.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEec------CCCchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHhCCCCc--
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAAS------RTSEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKATGIEYK--   82 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~S------n~~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~g~~p~--   82 (280)
                      ++-+...++.+.|++.|+....+-      .... ...+..+..+   +-||. .|+.| .-+..|...++..+.++.  
T Consensus        10 Rp~~~~~~l~~~l~~~G~~~~~~P~i~i~p~~~~-~~~~~~l~~l---~~~d~-iifTS~naV~~~~~~l~~~~~~~~~~   84 (255)
T PRK05752         10 RPAEECAALAASLAEAGIFSSSLPLLAIEPLPET-PEQRALLLEL---DRYCA-VIVVSKPAARLGLELLDRYWPQPPQQ   84 (255)
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEcCcEEEeeCCCC-HHHHHHHhcC---CCCCE-EEEECHHHHHHHHHHHHhhCCCCcCC
Confidence            567788999999999999887752      1111 1233444432   34673 33344 345667777766665443  


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCCchhhh
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGMTNAIT  116 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~  116 (280)
                      .+..||+....  +.++.|+.+.+++...+.+.+
T Consensus        85 ~~~aVG~~Ta~--al~~~G~~~~~~p~~~~se~L  116 (255)
T PRK05752         85 PWFSVGAATAA--ILQDYGLDVSYPEQGDDSEAL  116 (255)
T ss_pred             EEEEECHHHHH--HHHHcCCCcccCCCCCCcHHH
Confidence            67788886654  334568877666555544444

>PRK08811 uroporphyrinogen-III synthase; Validated

Probab=93.30  E-value=0.64  Score=40.26  Aligned_cols=223  Identities=10%  Similarity=-0.030  Sum_probs=116.1

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCC----CchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHhCCCCccEEE
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRT----SEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKATGIEYKDMVF   86 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~----~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~g~~p~~~l~   86 (280)
                      ++.+...++.+.|++.|.....+.--    .........++.+.   -||. .|+.| .-+..|....+......-.+..
T Consensus        25 Rp~~q~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~l~~l~---~~d~-iiftS~NAV~~~~~~~~~~~~~~~~~~A  100 (266)
T PRK08811         25 RPSGEHAPLRRAVARHGGRLLALSPWRLQRLDTAQARDALRQAL---AAPI-VVFTSPAAVRAAHRLLPLQRPARAHWLS  100 (266)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEcCceeecCCCchhHHHHHhhcc---cCCE-EEEECHHHHHHHHHHhcccCccCCeEEE
Confidence            55667789999999999888777542    11011222333322   4663 33344 3444444333222233345677


Q ss_pred             EeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceecc
Q psy8911          87 FDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKY  166 (280)
Q Consensus        87 v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (280)
                      ||+....  ++++.|+..++++...+.+.+.... ....       -.+++                   .     -++-
T Consensus       101 VG~~TA~--aL~~~G~~~~~~P~~~~se~Ll~l~-~~~~-------~g~~v-------------------L-----i~rg  146 (266)
T PRK08811        101 VGEGTAR--ALQACGIDEVVRPTRMDSEGLLALP-LAQA-------PLQAV-------------------G-----LITA  146 (266)
T ss_pred             ECHHHHH--HHHHcCCCceeCCCCCCcHHHHhCh-hhhC-------CCCEE-------------------E-----EEeC
Confidence            8886653  4456888888887655554443320 0000       00110                   0     0111


Q ss_pred             CCCHHHHHHHHhhCCcEEEEEcCC------CcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHc---CCCCCcE
Q psy8911         167 YRGVPEILRYLKENKCLVAAASRT------SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKAT---GIEYKDM  237 (280)
Q Consensus       167 ~~g~~~~L~~L~~~g~~~~i~T~~------~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~---~~~~~~~  237 (280)
                      -.|-..+-+.|+++|+++--+.--      .........+..    ...+.+...++.-...|...+...   .+..-.+
T Consensus       147 ~~gr~~L~~~L~~~G~~V~~~~vY~~~~~~~~~~~~~~l~~~----~~~d~i~ftS~sav~~f~~~l~~~~~~~l~~~~~  222 (266)
T PRK08811        147 PGGRGLLAPTLQQRGARILRADVYQRVPLRLRASTLAALSRA----APRSVLALSSAEALTLILQQLPDALRRALQQRPV  222 (266)
T ss_pred             CCcHHHHHHHHHHCCCEEeEEEEEeeeCCCCCHHHHHHHHHh----CCCCEEEEChHHHHHHHHHHhhhhHHHHHhCCCE
Confidence            122334446677777655333211      011111111122    122322222222234454443221   1344457


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCCCHHHHHHHHHHHHh
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWAS  278 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~  278 (280)
                      +.||....+  .++++|+..+.|..+.+.+.|-.++.++++
T Consensus       223 v~is~rtA~--~a~~~G~~~v~vA~~~~~~~l~~a~~~~~~  261 (266)
T PRK08811        223 VASSDRLLD--AAHAAGFIHVMRAAGPLPAQLAAAAAAIMT  261 (266)
T ss_pred             EEeCHHHHH--HHHHcCCCceeeCCCCCHHHHHHHHHhhcC
Confidence            888887776  889999999999999999999999998764

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=93.24  E-value=0.36  Score=45.10  Aligned_cols=82  Identities=11%  Similarity=0.112  Sum_probs=64.5

Q ss_pred             cCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcC
Q psy8911         166 YYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEER  245 (280)
Q Consensus       166 ~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~  245 (280)
                      ..||++|-..+|++.|++...+|+- .+-.+..+.++-|+++|.-.      .+|+-=..+.++.+-.-.=+-|.||..+
T Consensus       448 vK~Gi~ERf~elR~MgIkTvM~TGD-N~~TAa~IA~EAGVDdfiAe------atPEdK~~~I~~eQ~~grlVAMtGDGTN  520 (681)
T COG2216         448 VKPGIKERFAELRKMGIKTVMITGD-NPLTAAAIAAEAGVDDFIAE------ATPEDKLALIRQEQAEGRLVAMTGDGTN  520 (681)
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCC-CHHHHHHHHHHhCchhhhhc------CChHHHHHHHHHHHhcCcEEEEcCCCCC
Confidence            5699999999999999999999999 88899999999999998763      4454434444555556566779999999


Q ss_pred             CcccccccC
Q psy8911         246 NSHDVSPLG  254 (280)
Q Consensus       246 di~~a~~aG  254 (280)
                      |--+-.+|.
T Consensus       521 DAPALAqAd  529 (681)
T COG2216         521 DAPALAQAD  529 (681)
T ss_pred             cchhhhhcc
Confidence            955554443

>PLN02887 hydrolase family protein

Probab=93.13  E-value=0.069  Score=51.32  Aligned_cols=45  Identities=13%  Similarity=0.237  Sum_probs=39.9

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      .|...+..+++.+|+++++++.|||+.||++.-+.+|.. +++.++
T Consensus       507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~g-VAMgNA  551 (580)
T PLN02887        507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLG-VALSNG  551 (580)
T ss_pred             CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCE-EEeCCC
Confidence            677889999999999999999999999999999999975 555544

>KOG3107|consensus

Probab=93.01  E-value=0.21  Score=44.67  Aligned_cols=93  Identities=18%  Similarity=0.265  Sum_probs=68.2

Q ss_pred             CcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceE
Q psy8911         181 KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC  257 (280)
Q Consensus       181 g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~  257 (280)
                      +..=+++|+. ..-.+-..+=-.||...|-.-.+++.   .|..-|+.|.+|+|- .-.-+.|||....-++||+..|++
T Consensus       370 ncvnVlvTtt-qLipalaKvLL~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~Pf  447 (468)
T KOG3107|consen  370 NCVNVLVTTT-QLIPALAKVLLYGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPF  447 (468)
T ss_pred             ceeEEEEecc-chhHHHHHHHHHhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCce
Confidence            3445677777 54433333334677777764445554   344559999999998 566778999998889999999999


Q ss_pred             EEECCCCCHHHHHHHHHH
Q psy8911         258 IHVKKGMSHAVLQKGLKQ  275 (280)
Q Consensus       258 i~v~~g~~~~~~~~~~~~  275 (280)
                      .-+....+...+..+|+.
T Consensus       448 wrI~~h~Dl~~l~~aL~~  465 (468)
T KOG3107|consen  448 WRISSHSDLDALYSALEL  465 (468)
T ss_pred             EeeccCccHHHHhhhccc
Confidence            999988888888877754

>KOG2469|consensus

Probab=92.93  E-value=0.29  Score=44.26  Aligned_cols=96  Identities=14%  Similarity=0.219  Sum_probs=71.2

Q ss_pred             cCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc---CccccccccceecCCCh-----------------------
Q psy8911          14 YPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF---NWNQYFDHKQIFPGQKT-----------------------   67 (280)
Q Consensus        14 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~---~l~~~fd~~~i~~~~~~-----------------------   67 (280)
                      .+-...+|..+++.|.++.++||+.. .........+   ++..|||.+.+.+ .++                       
T Consensus       200 d~~~v~~l~~~r~sGKk~fl~Tns~~-~ytd~~mt~~~~~dW~~yfd~v~~~a-~Kp~ff~e~~vlreV~t~~g~l~~g~  277 (424)
T KOG2469|consen  200 DGTIVPLLSMLRDSGKKTFLHTNSDW-DYTDIFMAFHYGFDWETYFDLVETRA-AKPGFFHEGTVLREVEPQEGLLKNGD  277 (424)
T ss_pred             cCccccchHHHHhhccceEEeecccc-chhhHHHHHHhCCCcceeEEEEEEec-cCCccccccceeeeeccccccccccc
Confidence            33344599999999999999999998 7777766654   6888998432221 110                       


Q ss_pred             -------------hHHHHHHHHhCCCCccEEEEeCCccc--ccccccCCCeEEEEcCCC
Q psy8911          68 -------------THFANLKKATGIEYKDMVFFDDEERN--SHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        68 -------------~~~~~~~~~~g~~p~~~l~v~D~~~~--i~aa~~~G~~~i~v~~~~  111 (280)
                                   +.-+.+++.++..-.+++++||+.++  +..-+.-|+.+++|.+..
T Consensus       278 ~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL  336 (424)
T KOG2469|consen  278 NTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPEL  336 (424)
T ss_pred             cCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhh
Confidence                         11677888899988999999999774  556677999999986544

>TIGR00685 T6PP trehalose-phosphatase

Probab=92.75  E-value=0.12  Score=44.15  Aligned_cols=40  Identities=10%  Similarity=0.034  Sum_probs=35.5

Q ss_pred             HHHHHHHHhCCCCccEEEEeCCcccccccccC-------CCeEEEEc
Q psy8911          69 HFANLKKATGIEYKDMVFFDDEERNSHDVSPL-------GVTCILVE  108 (280)
Q Consensus        69 ~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~-------G~~~i~v~  108 (280)
                      ..+.++++++.++.+++||||+.+|+.+++.+       |..++.+.
T Consensus       171 a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~  217 (244)
T TIGR00685       171 IVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG  217 (244)
T ss_pred             HHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence            49999999999999999999999999999888       66777774

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=92.72  E-value=0.37  Score=49.16  Aligned_cols=96  Identities=9%  Similarity=0.052  Sum_probs=68.9

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChh----------------------
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTT----------------------   68 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~----------------------   68 (280)
                      =+|.+++.+.++.|+++|+++.++|.-+. ..+..+-+..|+..--+...++.+....                      
T Consensus       546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~-~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP  624 (917)
T COG0474         546 DPPREDVKEAIEELREAGIKVWMITGDHV-ETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP  624 (917)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEECCCCH-HHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence            37899999999999999999999999999 9999999999965332100133332111                      


Q ss_pred             -H---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          69 -H---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        69 -~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                       +   .-+++++.   =.-+.|.||..+|+-|-++|-+-......|
T Consensus       625 ~qK~~IV~~lq~~---g~vVamtGDGvNDapALk~ADVGIamg~~G  667 (917)
T COG0474         625 EQKARIVEALQKS---GHVVAMTGDGVNDAPALKAADVGIAMGGEG  667 (917)
T ss_pred             HHHHHHHHHHHhC---CCEEEEeCCCchhHHHHHhcCccEEecccH
Confidence             1   22333333   467899999999999999988776544333

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=92.58  E-value=0.25  Score=49.52  Aligned_cols=63  Identities=19%  Similarity=0.017  Sum_probs=46.0

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      .++.+|+||||.+.....              .......+-|++.++|+.|.+. +..++|+|+. ..+.++..+...+
T Consensus       508 rll~LDyDGTL~~~~~~~--------------~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR-~~~~L~~~~~~~~  571 (797)
T PLN03063        508 RLLILGFYGTLTEPRNSQ--------------IKEMDLGLHPELKETLKALCSDPKTTVVVLSRS-GKDILDKNFGEYN  571 (797)
T ss_pred             eEEEEecCccccCCCCCc--------------cccccCCCCHHHHHHHHHHHcCCCCEEEEEeCC-CHHHHHHHhCCCC
Confidence            367899999998532110              0112355778999999999765 6789999999 8888888887644

>KOG3107|consensus

Probab=92.45  E-value=0.36  Score=43.23  Aligned_cols=86  Identities=14%  Similarity=0.125  Sum_probs=64.4

Q ss_pred             EEecCC-CchHHHHHHHhhcCccccccccceecCCChhH---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEE
Q psy8911          32 AAASRT-SEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        32 ~i~Sn~-~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v  107 (280)
                      .++|+. -.|..++.+|  +||...|.+.-|++..|+++   |+++.+++|- .-..++|||....-.+|++..|..+-+
T Consensus       374 VlvTttqLipalaKvLL--~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI  450 (468)
T KOG3107|consen  374 VLVTTTQLIPALAKVLL--YGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRI  450 (468)
T ss_pred             EEEeccchhHHHHHHHH--HhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEee
Confidence            445544 4433344444  46667787668999988887   9999999998 566788999988899999999999999


Q ss_pred             cCCCchhhhhccc
Q psy8911         108 EDGMTNAITLYGR  120 (280)
Q Consensus       108 ~~~~~~~~~~~~~  120 (280)
                      ..+.+...+.+++
T Consensus       451 ~~h~Dl~~l~~aL  463 (468)
T KOG3107|consen  451 SSHSDLDALYSAL  463 (468)
T ss_pred             ccCccHHHHhhhc
Confidence            7777666655443

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=92.41  E-value=0.68  Score=39.10  Aligned_cols=89  Identities=16%  Similarity=0.181  Sum_probs=62.3

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHH----HHHHHhhcCccccccccceecCC---ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG----AQQLLDLFNWNQYFDHKQIFPGQ---KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~----~~~~l~~~~l~~~fd~~~i~~~~---~~~~~~~~~~~~g~~p~   82 (280)
                      ..++.||+.|+++..-++|..|.-+||... +.    ...-|..+|+...-+.+.++-..   +...++.+.+    ..+
T Consensus       120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~-~~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~~~  194 (274)
T COG2503         120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQ-ENEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----DYK  194 (274)
T ss_pred             ccccCccHHHHHHHHHhcCcEEEEEeccch-hcccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----ccc
Confidence            467899999999999999999999999887 43    23345666776655533333322   2333666666    556


Q ss_pred             cEEEEeCCcccccccccCCCe
Q psy8911          83 DMVFFDDEERNSHDVSPLGVT  103 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~  103 (280)
                      =+++|||...|.......+..
T Consensus       195 iVm~vGDNl~DF~d~~~k~~~  215 (274)
T COG2503         195 IVMLVGDNLDDFGDNAYKKAE  215 (274)
T ss_pred             eeeEecCchhhhcchhhhhhh
Confidence            689999999887665554443

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=92.35  E-value=0.63  Score=39.77  Aligned_cols=44  Identities=16%  Similarity=0.172  Sum_probs=34.8

Q ss_pred             ChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          66 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        66 ~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      |-...+.+++++++++++++++|||.+|+..- ..+.++|.|.+.
T Consensus       166 K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na  209 (247)
T PF05116_consen  166 KGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNA  209 (247)
T ss_dssp             HHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred             HHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence            44459999999999999999999999998776 778889988553

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PLN02382 probable sucrose-phosphatase

Probab=92.22  E-value=0.46  Score=43.88  Aligned_cols=45  Identities=20%  Similarity=0.182  Sum_probs=38.3

Q ss_pred             ChhHHHHHHHHh---CCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          66 KTTHFANLKKAT---GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        66 ~~~~~~~~~~~~---g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      |-...+.+++.+   |+++++++.|||+.+|++.-+.+|...|.+.+.
T Consensus       176 Kg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA  223 (413)
T PLN02382        176 KGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA  223 (413)
T ss_pred             HHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence            333488899998   999999999999999999999999877777554

>smart00775 LNS2 LNS2 domain

Probab=92.13  E-value=0.81  Score=36.23  Aligned_cols=37  Identities=14%  Similarity=0.122  Sum_probs=31.5

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHH---HHHhh
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQ---QLLDL   49 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~---~~l~~   49 (280)
                      ...|++.++++.|+++|+++.++|..+. ..+.   .+++.
T Consensus        27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~-~~~~~t~~~l~~   66 (157)
T smart00775       27 WTHPGVAKLYRDIQNNGYKILYLTARPI-GQADRTRSYLSQ   66 (157)
T ss_pred             cCCHHHHHHHHHHHHcCCeEEEEcCCcH-HHHHHHHHHHHH
Confidence            4579999999999999999999999998 6553   56666

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=91.98  E-value=0.79  Score=38.37  Aligned_cols=40  Identities=13%  Similarity=0.103  Sum_probs=33.2

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNW   52 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l   52 (280)
                      .++-||+.+.++.|.++ ++-.|+|.+.. .++++.....|+
T Consensus        82 a~lvPgA~etm~~l~~~-~tp~v~STSY~-qy~~r~a~~ig~  121 (315)
T COG4030          82 AKLVPGAEETMATLQER-WTPVVISTSYT-QYLRRTASMIGV  121 (315)
T ss_pred             cccCCChHHHHHHHhcc-CCceEEeccHH-HHHHHHHHhcCC
Confidence            67899999999999987 67778888888 778887777765

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=91.96  E-value=1.4  Score=38.77  Aligned_cols=112  Identities=13%  Similarity=0.053  Sum_probs=66.1

Q ss_pred             eEEEecCCCCCCccccccc-CcccccCCeeEccCCceeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHH---HHHhh
Q psy8911         128 HLSKKLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAK---QILNL  202 (280)
Q Consensus       128 ~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~---~~l~~  202 (280)
                      .++-|+|.|+.-++..+.. .-     .+..-.+...-.++||+..+.+.|.+.| .++.-+||+ +-..-.   +.+..
T Consensus       163 giISDiDDTV~~T~V~~~~r~~-----~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnS-Pw~~f~~L~efi~~  236 (373)
T COG4850         163 GIISDIDDTVKVTGVTEGPRKA-----GRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNS-PWQLFPTLQEFITN  236 (373)
T ss_pred             eeeeccccceEecccccchHHH-----HHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCC-hhHhHHHHHHHHhc
Confidence            4688999999765544321 00     0011123334578999999999999998 899999998 443322   22222


Q ss_pred             CCCc----------cccccceEec-CCCHHHHHHHHHHcCCCCCcEEEEeCCcC-Cc
Q psy8911         203 INLN----------QYFSNKEIYP-GPKTTHFESLKKATGIEYKDMVFFDDEER-NS  247 (280)
Q Consensus       203 ~gl~----------~~f~~~~~~~-~~k~~~~~~~~~~~~~~~~~~l~igD~~~-di  247 (280)
                      -++.          ..|+.+...+ ..|...++.++.++  +-...+.|||+=. |.
T Consensus       237 ~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~--p~~kfvLVGDsGE~Dp  291 (373)
T COG4850         237 RNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRY--PDRKFVLVGDSGEHDP  291 (373)
T ss_pred             CCCCCCchhHhhcCCcccccccchhhhcccHHHHHHHhC--CCceEEEecCCCCcCH
Confidence            2221          1233322112 24556677677774  4568889988744 53

>KOG2469|consensus

Probab=91.87  E-value=0.56  Score=42.42  Aligned_cols=98  Identities=11%  Similarity=0.150  Sum_probs=71.1

Q ss_pred             CCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---CCccccccceEec-CC------------------------
Q psy8911         167 YRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNKEIYP-GP------------------------  218 (280)
Q Consensus       167 ~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---gl~~~f~~~~~~~-~~------------------------  218 (280)
                      .+.....|..+++.|.++.++||+ .-.++...+.++   +...||+.+++.. +|                        
T Consensus       200 d~~~v~~l~~~r~sGKk~fl~Tns-~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~  278 (424)
T KOG2469|consen  200 DGTIVPLLSMLRDSGKKTFLHTNS-DWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDN  278 (424)
T ss_pred             cCccccchHHHHhhccceEEeecc-ccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeecccccccccccc
Confidence            344444889999999999999999 777777666653   5678888765442 11                        


Q ss_pred             ----------CHHHHHHHHHHcCCCCCcEEEEeCCcC-Cccccc-ccCceEEEECCCCC
Q psy8911         219 ----------KTTHFESLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVKKGMS  265 (280)
Q Consensus       219 ----------k~~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~-~aG~~~i~v~~g~~  265 (280)
                                .......+++.++..-.++++|||... ||.-.+ .-|+.+++|-....
T Consensus       279 ~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL~  337 (424)
T KOG2469|consen  279 TGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPELE  337 (424)
T ss_pred             CCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhhh
Confidence                      113367778888888899999999998 454444 47999999865443

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=91.80  E-value=0.75  Score=47.77  Aligned_cols=41  Identities=22%  Similarity=0.220  Sum_probs=36.7

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      ++.+|+.++++.|++.|+++.++|+- ..+.+..+.+..|+-
T Consensus       631 ~lq~~v~etI~~L~~AGIkv~mlTGD-~~~TA~~IA~~~~ii  671 (1057)
T TIGR01652       631 KLQEGVPETIELLRQAGIKIWVLTGD-KVETAINIGYSCRLL  671 (1057)
T ss_pred             hhhhccHHHHHHHHHCCCeEEEEcCC-cHHHHHHHHHHhCCC
Confidence            67899999999999999999999998 888888887777764

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=91.71  E-value=0.38  Score=48.73  Aligned_cols=70  Identities=16%  Similarity=0.088  Sum_probs=47.1

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      .++.+|+||||.+....-...     ...+   ....+.+.|++.++|+.|.+. +..++|+|+. ..+.++..+...++
T Consensus       592 RLlfLDyDGTLap~~~~P~~~-----~~~~---~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR-~~~~Le~~fg~~~L  662 (934)
T PLN03064        592 RLLILGFNATLTEPVDTPGRR-----GDQI---KEMELRLHPELKEPLRALCSDPKTTIVVLSGS-DRSVLDENFGEFDM  662 (934)
T ss_pred             eEEEEecCceeccCCCCcccc-----cccc---cccccCCCHHHHHHHHHHHhCCCCeEEEEeCC-CHHHHHHHhCCCCc
Confidence            477899999998743221000     0000   001345668899999999764 6789999999 88888888877544

>KOG0202|consensus

Probab=91.63  E-value=0.81  Score=45.22  Aligned_cols=91  Identities=9%  Similarity=0.031  Sum_probs=67.9

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc-------------------------eEecCCC
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK-------------------------EIYPGPK  219 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~-------------------------~~~~~~k  219 (280)
                      +|.|++++.++.++..|+++.++|+- ..+.+..+.+.+|+...=+.+                         .++....
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD-~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~  662 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGD-NKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE  662 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence            67899999999999999999999999 999999999999986433210                         1122233


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         220 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                      |.+=.++.+.++-.-+=+-|-||..+|--+-|.|.+-
T Consensus       663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG  699 (972)
T KOG0202|consen  663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG  699 (972)
T ss_pred             chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc
Confidence            4444555555555556777999999998777776543

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=91.53  E-value=0.19  Score=42.08  Aligned_cols=36  Identities=22%  Similarity=0.317  Sum_probs=33.0

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      .+.+++.+|+++++++.|||+.+|+..-+.+|...+
T Consensus       191 i~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~a  226 (254)
T PF08282_consen  191 IKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVA  226 (254)
T ss_dssp             HHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEE
T ss_pred             HHHHhhhcccccceeEEeecccccHhHHhhcCeEEE
Confidence            888899999999999999999999999999987644

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=91.03  E-value=0.53  Score=41.16  Aligned_cols=33  Identities=12%  Similarity=0.189  Sum_probs=30.3

Q ss_pred             CCCcceecCCHHHHHHHHHHCC-ceEEEecCCCc
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNN-CLVAAASRTSE   39 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g-~~~~i~Sn~~~   39 (280)
                      ...+..+||.+.++++.+|+.| ++++++||+..
T Consensus        87 ~~GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl  120 (296)
T COG0731          87 LSGEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL  120 (296)
T ss_pred             CCCCcccccCHHHHHHHHHhcCCceEEEEeCCCh
Confidence            3456789999999999999999 79999999999

>KOG0202|consensus

Probab=90.51  E-value=1.5  Score=43.44  Aligned_cols=93  Identities=10%  Similarity=0.079  Sum_probs=68.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc--ceecC-----------------------CC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK--QIFPG-----------------------QK   66 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~--~i~~~-----------------------~~   66 (280)
                      +|.|++.+.++.+++.|+++.++|.-.. ..++.+-++.|+...=+.+  ..+++                       ..
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~~-~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~  662 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDNK-ETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE  662 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCCH-HHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence            7899999999999999999999999999 9999999999974332210  11122                       12


Q ss_pred             hhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          67 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        67 ~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      +.+=.++.+.++-.-+=+.|-||..+|.-|-+.|.+-..
T Consensus       663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIA  701 (972)
T KOG0202|consen  663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIA  701 (972)
T ss_pred             chhHHHHHHHHHhcCCEEEecCCCccchhhhhhccccee
Confidence            222345555566666778999999999888877766544

>KOG3189|consensus

Probab=90.16  E-value=0.94  Score=37.11  Aligned_cols=57  Identities=16%  Similarity=0.129  Sum_probs=41.1

Q ss_pred             eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC--C
Q psy8911         128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN--L  205 (280)
Q Consensus       128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g--l  205 (280)
                      ++.||.||||.+.                      .....|.+.+.|+.|++. +.++++-++ ..+   +..+++|  +
T Consensus        13 l~lfdvdgtLt~~----------------------r~~~~~e~~~~l~~lr~~-v~ig~Vggs-Dl~---k~~eqlG~~V   65 (252)
T KOG3189|consen   13 LCLFDVDGTLTPP----------------------RQKVTPEMLEFLQKLRKK-VTIGFVGGS-DLS---KQQEQLGDNV   65 (252)
T ss_pred             EEEEecCCccccc----------------------cccCCHHHHHHHHHHhhh-eEEEEeecH-HHH---HHHHHhchhH
Confidence            6789999999742                      234668999999999888 889999888 443   3444543  3


Q ss_pred             cccccc
Q psy8911         206 NQYFSN  211 (280)
Q Consensus       206 ~~~f~~  211 (280)
                      .+-||+
T Consensus        66 l~~fDY   71 (252)
T KOG3189|consen   66 LEEFDY   71 (252)
T ss_pred             Hhhhcc
Confidence            455664

>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed

Probab=88.72  E-value=1.1  Score=37.63  Aligned_cols=224  Identities=16%  Similarity=0.158  Sum_probs=111.3

Q ss_pred             cCCHHHHHHHHHHCCceEEEecCC---CchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHh---CCCCccEEE
Q psy8911          14 YPDVPGILKYLKQNNCLVAAASRT---SEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKAT---GIEYKDMVF   86 (280)
Q Consensus        14 ~~g~~~~l~~L~~~g~~~~i~Sn~---~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~---g~~p~~~l~   86 (280)
                      -+...++.+.|+++|..+..+.--   +.+.... ...... ..-+|. .++.| .-+..|...++..   ......++.
T Consensus        10 ~~~~~~l~~~l~~~G~~v~~~p~~~~~~~~~~~~-~~~~~~-~~~~d~-iiftS~~av~~~~~~~~~~~~~~~~~~~~~a   86 (249)
T PRK05928         10 SPKAEELVELLRELGFVALHFPLIEIEPGRQLPQ-LAAQLA-ALGADW-VIFTSKNAVEFLLSALKKKKLKWPKNKKYAA   86 (249)
T ss_pred             HHHHHHHHHHHHHcCCCEEEeccEEEecCCCcCh-HHHHhh-CCCCCE-EEEECHHHHHHHHHHHHhcCcCCCCCCEEEE
Confidence            345567888999999877654211   1100011 111122 233673 23333 3455565555521   234456777


Q ss_pred             EeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceecc
Q psy8911          87 FDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKY  166 (280)
Q Consensus        87 v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (280)
                      ||.....  ++++.|..+.+++...+.+++.......        .+.|                  ..+.     -...
T Consensus        87 vG~~Ta~--~l~~~G~~~~~~~~~~~~~~l~~~l~~~--------~~~~------------------~~il-----i~~~  133 (249)
T PRK05928         87 IGEKTAL--ALKKLGGKVVFVPEDGESSELLLELPEL--------LLKG------------------KRVL-----YLRG  133 (249)
T ss_pred             ECHHHHH--HHHHcCCCccccCCCCcChHHHHhChhh--------hcCC------------------CEEE-----EECC
Confidence            7776543  4456788877775443333332211110        0010                  0000     0112


Q ss_pred             CCCHHHHHHHHhhCCcEEEEEc---CCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcC----CCCCcEEE
Q psy8911         167 YRGVPEILRYLKENKCLVAAAS---RTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATG----IEYKDMVF  239 (280)
Q Consensus       167 ~~g~~~~L~~L~~~g~~~~i~T---~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~----~~~~~~l~  239 (280)
                      -.+...+.+.|++.|..+..+.   ...........++.+. ...+|.+...+..-.+.|...+...+    +..-.++.
T Consensus       134 ~~~~~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~-~~~~d~ivftS~~~v~~~~~~~~~~~~~~~~~~~~~~a  212 (249)
T PRK05928        134 NGGREVLGDTLEERGAEVDECEVYERVPPKLDGAELLARLQ-SGEVDAVIFTSPSTVRAFFSLAPELGRREWLLSCKAVV  212 (249)
T ss_pred             CCCHHHHHHHHHHCCCEEeEEEEEEeeCCCCChHHHHHHHH-hCCCCEEEECCHHHHHHHHHHhcccchhHHHhCCeEEE
Confidence            2345566677888775543321   1101101111111111 22445443333333455555554443    22445778


Q ss_pred             EeCCcCCcccccccCceEEEECCCCCHHHHHHHHHHH
Q psy8911         240 FDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQW  276 (280)
Q Consensus       240 igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~  276 (280)
                      ||....+  .+++.|...+.++...+...+.+++..|
T Consensus       213 iG~~Ta~--~l~~~G~~~~~~~~~~~~~~l~~~l~~~  247 (249)
T PRK05928        213 IGERTAE--ALRELGIKVIIVPDSADNEALLRALKEL  247 (249)
T ss_pred             eCHHHHH--HHHHcCCCcceecCCCChHHHHHHHHHh
Confidence            8888877  7788999988898877888887777765

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=88.72  E-value=0.7  Score=39.48  Aligned_cols=88  Identities=18%  Similarity=0.233  Sum_probs=60.6

Q ss_pred             CHHHHHHHHHHC------CceEEEecCCCchHHHHHHHhhc-CccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911          16 DVPGILKYLKQN------NCLVAAASRTSEIQGAQQLLDLF-NWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus        16 g~~~~l~~L~~~------g~~~~i~Sn~~~~~~~~~~l~~~-~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~   88 (280)
                      .....|.+|+++      -++++|+|..+.|.+ +++++.+ .|.=..|.....++-+.+.++.+.+.       =+|||
T Consensus       168 ~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah-~RvI~TLr~Wgv~vDEafFLgG~~K~~vL~~~~p-------hIFFD  239 (264)
T PF06189_consen  168 DFLKKLSKLQKKFPPENSPIRTALVTARSAPAH-ERVIRTLRSWGVRVDEAFFLGGLPKGPVLKAFRP-------HIFFD  239 (264)
T ss_pred             HHHHHHHHHHHhcCCCCCceEEEEEEcCCCchh-HHHHHHHHHcCCcHhHHHHhCCCchhHHHHhhCC-------CEeec
Confidence            455556666654      478999998877544 6666655 34445663334456566666665543       38999


Q ss_pred             CCcccccccccCCCeEEEEcCCCc
Q psy8911          89 DEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        89 D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      |...+++.|. .+..+.+|+++..
T Consensus       240 DQ~~H~~~a~-~~vps~hVP~gv~  262 (264)
T PF06189_consen  240 DQDGHLESAS-KVVPSGHVPYGVA  262 (264)
T ss_pred             CchhhhhHhh-cCCCEEeccCCcC
Confidence            9999999999 8999999988753

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=88.72  E-value=1.4  Score=45.68  Aligned_cols=41  Identities=15%  Similarity=0.105  Sum_probs=38.0

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN   53 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~   53 (280)
                      ++.|++.+.++.|+++|+++.++|..+. ..+..+-+..|+.
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD~~-~TA~~iA~~~gii  696 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGDNP-LTAVHVARECGIV  696 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCC
Confidence            5899999999999999999999999999 8899988888883

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=88.27  E-value=1.4  Score=38.54  Aligned_cols=38  Identities=11%  Similarity=0.184  Sum_probs=31.3

Q ss_pred             eeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         163 LIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      +-.+||...++++.+|+.| ++++|+||+ ..   ..+++.+.
T Consensus        90 EPTLy~~L~elI~~~k~~g~~~tflvTNg-sl---pdv~~~L~  128 (296)
T COG0731          90 EPTLYPNLGELIEEIKKRGKKTTFLVTNG-SL---PDVLEELK  128 (296)
T ss_pred             CcccccCHHHHHHHHHhcCCceEEEEeCC-Ch---HHHHHHhc
Confidence            4579999999999999999 799999999 66   34455554

>cd06578 HemD Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme

Probab=87.68  E-value=13  Score=30.81  Aligned_cols=215  Identities=9%  Similarity=0.031  Sum_probs=108.9

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCch----HHHHHHHhhcCccccccccceecCCChhHHHHHHHHhC---CCCccEE
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEI----QGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATG---IEYKDMV   85 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~----~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g---~~p~~~l   85 (280)
                      +-++..++.+.|+++|+.+..+.--...    ......+..+.   .+|.+.+.++.-+..|...+...+   .....++
T Consensus         6 ~~~~~~~l~~~L~~~G~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~iiftS~~av~~~~~~~~~~~~~~~~~~~~~   82 (239)
T cd06578           6 PRPQADELAALLEALGAEVLELPLIEIEPLDDAELDAALADLD---EYDWLIFTSPNAVEAFFEALEELGLRALAGLKIA   82 (239)
T ss_pred             chHHhHHHHHHHHHcCCcEEEeeeEEEecCChHHHHHHHHhcC---CCCEEEEECHHHHHHHHHHHHhhCCccccCCEEE
Confidence            3445678999999999887555322220    12233333332   577433334444555666666543   4455677


Q ss_pred             EEeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceec
Q psy8911          86 FFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIK  165 (280)
Q Consensus        86 ~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (280)
                      .||....+  ++++.|+..+.++...+.+.+.+.....        +..|.                  .+       +.
T Consensus        83 avG~~Ta~--~l~~~g~~~~~~~~~~~~~~L~~~i~~~--------~~~~~------------------~i-------l~  127 (239)
T cd06578          83 AVGPKTAE--ALREAGLTADFVPEEGDSEGLLELLELQ--------DGKGK------------------RI-------LR  127 (239)
T ss_pred             EECHHHHH--HHHHcCCCceeCCCccCHHHHHHHHHhc--------CCCCC------------------EE-------EE
Confidence            77776553  5667898888875555544443321110        11000                  00       01


Q ss_pred             cCC--CHHHHHHHHhhCCcEEEEE---cCCCcH--HHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHc---CCCCC
Q psy8911         166 YYR--GVPEILRYLKENKCLVAAA---SRTSEI--LHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKAT---GIEYK  235 (280)
Q Consensus       166 ~~~--g~~~~L~~L~~~g~~~~i~---T~~~~~--~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~---~~~~~  235 (280)
                      +-.  +-..+.+.|++.|..+.-+   +.....  ......++..    ..+.+.+.+......|...+.+.   .+..-
T Consensus       128 ~~g~~~~~~l~~~L~~~g~~v~~~~~Y~~~~~~~~~~~~~~l~~~----~~~~iiftS~~~v~~f~~~~~~~~~~~~~~~  203 (239)
T cd06578         128 PRGGRAREDLAEALRERGAEVDEVEVYRTVPPDLDAELLELLEEG----AIDAVLFTSPSTVRNLLELLGKEGRALLKNV  203 (239)
T ss_pred             EcCcchhHHHHHHHHHCCCEEEEEEEEEEECCCCcHHHHHHHHcC----CCcEEEEeCHHHHHHHHHHHhhhhhhhhcCC
Confidence            111  1245556677777443222   222011  1112223222    12222222223345555555442   35556


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCCHHHHHH
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQK  271 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~  271 (280)
                      .++.||....+  .+++.|++.+.+....+...+-.
T Consensus       204 ~~~aig~~t~~--~l~~~g~~~~~~~~~~~~~~l~~  237 (239)
T cd06578         204 KIAAIGPRTAE--ALRELGLKVVIVAESPTLEALLE  237 (239)
T ss_pred             eEEEECHHHHH--HHHHcCCCceeeecCCChHHHHh
Confidence            77888888776  66678988888877765555543

This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=87.08  E-value=2.8  Score=38.78  Aligned_cols=97  Identities=13%  Similarity=0.051  Sum_probs=70.0

Q ss_pred             eccCCCH--HHHHHHHhhCCcEEEEEcCCCcHH-HHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911         164 IKYYRGV--PEILRYLKENKCLVAAASRTSEIL-HAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       164 ~~~~~g~--~~~L~~L~~~g~~~~i~T~~~~~~-~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~  235 (280)
                      ..+||..  .++.+.+.+.|.++.++|.-.-+. ..+..|...|.+-+=-.+-.+     .+.....|..+++.-+++|.
T Consensus        96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~  175 (635)
T COG5610          96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPK  175 (635)
T ss_pred             eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChh
Confidence            3456644  567799999999999999873333 456777777765322211111     12334668999999999999


Q ss_pred             cEEEEeCCcC-CcccccccCceEEEE
Q psy8911         236 DMVFFDDEER-NSHDVSPLGVTCIHV  260 (280)
Q Consensus       236 ~~l~igD~~~-di~~a~~aG~~~i~v  260 (280)
                      ..+.+||..+ |...++++|+.|.+.
T Consensus       176 ~w~H~GDN~~aD~l~pk~LgI~Tlf~  201 (635)
T COG5610         176 KWIHCGDNWVADYLKPKNLGISTLFY  201 (635)
T ss_pred             heEEecCchhhhhcCccccchhHHHH
Confidence            9999999988 889999999987653

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=86.45  E-value=2.9  Score=43.56  Aligned_cols=41  Identities=15%  Similarity=0.077  Sum_probs=35.5

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN   53 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~   53 (280)
                      +|.||+.+.++.|+++|+++.++|.-.. +.+..+-+..++.
T Consensus       631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~-~TA~~IA~~~~ii  671 (1057)
T TIGR01652       631 KLQEGVPETIELLRQAGIKIWVLTGDKV-ETAINIGYSCRLL  671 (1057)
T ss_pred             hhhhccHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHhCCC
Confidence            6789999999999999999999999888 7888776666653

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>KOG0323|consensus

Probab=85.98  E-value=2.4  Score=41.00  Aligned_cols=80  Identities=20%  Similarity=0.140  Sum_probs=56.5

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc-cccccceEecCCCHHHHHHHHHHcCCC---CCcE
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN-QYFSNKEIYPGPKTTHFESLKKATGIE---YKDM  237 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~k~~~~~~~~~~~~~~---~~~~  237 (280)
                      ..+++.|++.++|+++.+. +.|.|.|-+ .+.++..+++-+.=. .||...++..+..+  +.+...-..+.   +..+
T Consensus       198 ~~vKlRP~~~efL~~~skl-femhVyTmg-~R~YA~~i~~liDP~~~lF~dRIisrde~~--~~kt~dL~~~~p~g~smv  273 (635)
T KOG0323|consen  198 YLVKLRPFVHEFLKEANKL-FEMHVYTMG-TRDYALEIAKLIDPEGKYFGDRIISRDESP--FFKTLDLVLLFPCGDSMV  273 (635)
T ss_pred             EEEEeCccHHHHHHHHHhh-ceeEEEecc-chHHHHHHHHHhCCCCccccceEEEecCCC--cccccccccCCCCCCccE
Confidence            4578999999999999988 999999999 999999999988654 67875444333322  22222222333   3337


Q ss_pred             EEEeCCcC
Q psy8911         238 VFFDDEER  245 (280)
Q Consensus       238 l~igD~~~  245 (280)
                      +.|+|+..
T Consensus       274 vIIDDr~d  281 (635)
T KOG0323|consen  274 VIIDDRSD  281 (635)
T ss_pred             EEEeCccc
Confidence            77777765

>KOG0323|consensus

Probab=85.14  E-value=1.9  Score=41.68  Aligned_cols=87  Identities=17%  Similarity=0.138  Sum_probs=62.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCc-cccccccceecCCChhHHHHHHHHhCCCC---ccE
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNW-NQYFDHKQIFPGQKTTHFANLKKATGIEY---KDM   84 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l-~~~fd~~~i~~~~~~~~~~~~~~~~g~~p---~~~   84 (280)
                      ..+++.|++.++|+.+.+. |.+.|.|=+.+ ..+..+.+.+.- ..||.+ .|++-++ ..+.....-....|   +.+
T Consensus       198 ~~vKlRP~~~efL~~~skl-femhVyTmg~R-~YA~~i~~liDP~~~lF~d-RIisrde-~~~~kt~dL~~~~p~g~smv  273 (635)
T KOG0323|consen  198 YLVKLRPFVHEFLKEANKL-FEMHVYTMGTR-DYALEIAKLIDPEGKYFGD-RIISRDE-SPFFKTLDLVLLFPCGDSMV  273 (635)
T ss_pred             EEEEeCccHHHHHHHHHhh-ceeEEEeccch-HHHHHHHHHhCCCCccccc-eEEEecC-CCcccccccccCCCCCCccE
Confidence            4579999999999999977 99999999999 999999998854 467873 5555444 33333333333444   448


Q ss_pred             EEEeCCccccccccc
Q psy8911          85 VFFDDEERNSHDVSP   99 (280)
Q Consensus        85 l~v~D~~~~i~aa~~   99 (280)
                      ++|||+..-..-+..
T Consensus       274 vIIDDr~dVW~~~~~  288 (635)
T KOG0323|consen  274 VIIDDRSDVWPDHKR  288 (635)
T ss_pred             EEEeCccccccCCCc
Confidence            999998655555554

>PLN02423 phosphomannomutase

Probab=84.93  E-value=1.2  Score=38.04  Aligned_cols=41  Identities=17%  Similarity=0.240  Sum_probs=33.5

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeC----CcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD----~~~di~~a~~aG~~~i~v~~g  263 (280)
                      .|...+..++     ++++++.|||    ..||++.-+.-|+.++.|+..
T Consensus       189 nKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~  233 (245)
T PLN02423        189 DKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP  233 (245)
T ss_pred             CHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence            4445555555     9999999999    799999999899999999743

>KOG3128|consensus

Probab=84.82  E-value=2.3  Score=36.26  Aligned_cols=90  Identities=12%  Similarity=0.115  Sum_probs=57.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC-CCcc-------ccccc--e--E-ecCC------CH-HH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-NLNQ-------YFSNK--E--I-YPGP------KT-TH  222 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~-gl~~-------~f~~~--~--~-~~~~------k~-~~  222 (280)
                      .+.+..|+.++...|+++++|+.|.|.+ -...++..+++- ++..       |.++-  .  + +.+|      |. ..
T Consensus       136 ~i~lReg~~~ff~~L~~~~IP~~iFSAG-igdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v  214 (298)
T KOG3128|consen  136 NIALREGYEEFFEALQAHEIPLLIFSAG-IGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSV  214 (298)
T ss_pred             hHHHHHHHHHHHHHHHhCCCceEEEecc-hHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHH
Confidence            3567789999999999999999999999 777666665543 3332       11110  0  1 1111      11 11


Q ss_pred             HHHHHHHcC--CCCCcEEEEeCCcCCccccccc
Q psy8911         223 FESLKKATG--IEYKDMVFFDDEERNSHDVSPL  253 (280)
Q Consensus       223 ~~~~~~~~~--~~~~~~l~igD~~~di~~a~~a  253 (280)
                      ++...+.+.  -...++++.||+..|+..|..+
T Consensus       215 ~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv  247 (298)
T KOG3128|consen  215 LQNESEYFHQLAGRVNVILLGDSIGDLHMADGV  247 (298)
T ss_pred             HHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence            333344443  3567888999999998877763

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=83.77  E-value=4.8  Score=35.61  Aligned_cols=96  Identities=18%  Similarity=0.195  Sum_probs=60.0

Q ss_pred             CcceecCCHHHHHHHHHHCC-ceEEEecCCCchHHHHHHHhhcC-----c--------cccccccceecCC---ChhHHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNN-CLVAAASRTSEIQGAQQLLDLFN-----W--------NQYFDHKQIFPGQ---KTTHFA   71 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g-~~~~i~Sn~~~~~~~~~~l~~~~-----l--------~~~fd~~~i~~~~---~~~~~~   71 (280)
                      ..-+++|||-.+.+.|.+.| .++.-+||++- .....+-+.+.     .        ...||  .++.+.   |....+
T Consensus       193 ~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw-~~f~~L~efi~~~~~P~GPl~L~~~g~~~~--~i~~sga~rK~~~l~  269 (373)
T COG4850         193 LTRQVIPGVSAWYRALTNLGDAPVFYVSNSPW-QLFPTLQEFITNRNFPYGPLLLRRWGGVLD--NIIESGAARKGQSLR  269 (373)
T ss_pred             cccCCCCCHHHHHHHHHhcCCCCeEEecCChh-HhHHHHHHHHhcCCCCCCchhHhhcCCccc--ccccchhhhcccHHH
Confidence            34578999999999999999 99999999998 55544333322     1        12344  333332   222255


Q ss_pred             HHHHHhCCCCccEEEEeCC-cccccc----ccc--CCCeEEEEcC
Q psy8911          72 NLKKATGIEYKDMVFFDDE-ERNSHD----VSP--LGVTCILVED  109 (280)
Q Consensus        72 ~~~~~~g~~p~~~l~v~D~-~~~i~a----a~~--~G~~~i~v~~  109 (280)
                      .+++++  +-...+.|||+ +.|.+.    ++.  -.+-.|++++
T Consensus       270 nil~~~--p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRd  312 (373)
T COG4850         270 NILRRY--PDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRD  312 (373)
T ss_pred             HHHHhC--CCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeee
Confidence            566654  45679999998 667332    222  3445566544

>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional

Probab=83.25  E-value=31  Score=30.17  Aligned_cols=97  Identities=11%  Similarity=-0.005  Sum_probs=55.7

Q ss_pred             CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         168 RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      ....++++.|+++.-.+ .+.|.......++--....|..-.|.+.+.++   ++...+.+++++.+.   ++.+|+ +.
T Consensus       170 ~~~~~iv~~l~~~~~~~-~v~~TIC~aT~~RQ~a~~~La~~vD~miVVGg~~SsNT~rL~eia~~~~~---~t~~Ie-~~  244 (281)
T PRK12360        170 ELWEDILNVIKLKSKEL-VFFNTICSATKKRQESAKELSKEVDVMIVIGGKHSSNTQKLVKICEKNCP---NTFHIE-TA  244 (281)
T ss_pred             HHHHHHHHHHHHhCccc-ccCCCcchhhhhHHHHHHHHHHhCCEEEEecCCCCccHHHHHHHHHHHCC---CEEEEC-Ch
Confidence            45566677777664333 33444333333322223334555665433333   456778888888763   466664 45


Q ss_pred             CCcccccccCceEEEECCCCCHHHH
Q psy8911         245 RNSHDVSPLGVTCIHVKKGMSHAVL  269 (280)
Q Consensus       245 ~di~~a~~aG~~~i~v~~g~~~~~~  269 (280)
                      .|+..-.-.|..+|+++.|.+-+.|
T Consensus       245 ~el~~~~~~~~~~VGitaGASTP~~  269 (281)
T PRK12360        245 DELDLEMLKDYKIIGITAGASTPDW  269 (281)
T ss_pred             HHCCHHHhCCCCEEEEEccCCCCHH
Confidence            6666555578899999988865443

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=82.38  E-value=4.4  Score=30.80  Aligned_cols=29  Identities=14%  Similarity=-0.001  Sum_probs=26.3

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSE   39 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~   39 (280)
                      .++.+++.+.|+.|+++|+.+.++|..+.
T Consensus        23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~   51 (126)
T TIGR01689        23 VAPILAVIEKLRHYKALGFEIVISSSRNM   51 (126)
T ss_pred             cccCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence            45778999999999999999999998887

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]

Probab=82.36  E-value=33  Score=29.93  Aligned_cols=91  Identities=16%  Similarity=0.166  Sum_probs=58.5

Q ss_pred             CCCHHHHHHHHhhCCcE---------EEEEcCCCcHHHHHHHHhhCCCccccccceEec--CCCHHHHHHHHHHcCCCCC
Q psy8911         167 YRGVPEILRYLKENKCL---------VAAASRTSEILHAKQILNLINLNQYFSNKEIYP--GPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       167 ~~g~~~~L~~L~~~g~~---------~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~--~~k~~~~~~~~~~~~~~~~  235 (280)
                      .....++++.|+++ ++         ++-+|.. +.+.++.+.+.   .+++-  ++++  +++...+.+++++.|.   
T Consensus       170 ~ddt~~Iv~~l~~r-~p~~~~~~~~~ICyAT~n-RQ~Avk~la~~---~Dl~i--VVG~~nSSNs~rL~eiA~~~g~---  239 (294)
T COG0761         170 VDDTAEIVAALKER-FPKIEVPPFNDICYATQN-RQDAVKELAPE---VDLVI--VVGSKNSSNSNRLAEIAKRHGK---  239 (294)
T ss_pred             HHHHHHHHHHHHHh-CccccCCcccccchhhhh-HHHHHHHHhhc---CCEEE--EECCCCCccHHHHHHHHHHhCC---
Confidence            46788888888887 66         5555555 33333333322   23332  2332  2445678999999988   


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCCHHH
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAV  268 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~  268 (280)
                      .+..| |++.+|....-.|..+|+|+.|.+-++
T Consensus       240 ~aylI-d~~~ei~~~w~~~~~~VGvTAGAStPd  271 (294)
T COG0761         240 PAYLI-DDAEEIDPEWLKGVKTVGVTAGASTPD  271 (294)
T ss_pred             CeEEe-CChHhCCHHHhcCccEEEEecCCCCCH
Confidence            34444 567778877778899999999986444

>PLN03190 aminophospholipid translocase; Provisional

Probab=81.91  E-value=4.5  Score=42.54  Aligned_cols=36  Identities=25%  Similarity=0.194  Sum_probs=30.9

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN  201 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~  201 (280)
                      ++.+|+.++++.|+++|+++.++|+- ....+..+.+
T Consensus       726 ~lr~~v~~~I~~l~~agi~v~mlTGD-~~~tAi~IA~  761 (1178)
T PLN03190        726 KLQQGVPEAIESLRTAGIKVWVLTGD-KQETAISIGY  761 (1178)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHH
Confidence            57899999999999999999999998 7776665544

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=81.47  E-value=3.3  Score=33.06  Aligned_cols=92  Identities=16%  Similarity=0.215  Sum_probs=60.3

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc-ccccccceecCCChhHHHHHHHHhCCCCccEEEEeCC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN-QYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDE   90 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~-~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~   90 (280)
                      .+-.++...|..|+++ -+++-+|+... +..+.--..+... -.||+..+++....   -.+.+...++    +|++|+
T Consensus        72 l~~q~v~~~L~~~~e~-~~L~~itar~~-dl~~iT~~~l~~q~ih~~~l~i~g~h~K---V~~vrth~id----lf~ed~  142 (194)
T COG5663          72 LLAQLVKQVLPSLKEE-HRLIYITARKA-DLTRITYAWLFIQNIHYDHLEIVGLHHK---VEAVRTHNID----LFFEDS  142 (194)
T ss_pred             HHHHHHHHHhHHHHhh-ceeeeeehhhH-HHHHHHHHHHHHhccchhhhhhhccccc---chhhHhhccC----cccccc
Confidence            3455788888888887 57777777766 5555444443322 34665555544322   2445555554    789999


Q ss_pred             ccc-ccccccCCCeEEEEcCCCc
Q psy8911          91 ERN-SHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        91 ~~~-i~aa~~~G~~~i~v~~~~~  112 (280)
                      ..+ ++.|+++|++++++.++..
T Consensus       143 ~~na~~iAk~~~~~vilins~yn  165 (194)
T COG5663         143 HDNAGQIAKNAGIPVILINSPYN  165 (194)
T ss_pred             CchHHHHHHhcCCcEEEecCccc
Confidence            766 8889999999999976543

>KOG3128|consensus

Probab=81.15  E-value=3.3  Score=35.34  Aligned_cols=89  Identities=9%  Similarity=-0.023  Sum_probs=58.6

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccc----------ccceecCCChh--H--------
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFD----------HKQIFPGQKTT--H--------   69 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd----------~~~i~~~~~~~--~--------   69 (280)
                      .+.+..|..++...|+++++|+.|.|.+-. +..+.+++......-+.          .....++....  +        
T Consensus       136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGig-diiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v  214 (298)
T KOG3128|consen  136 NIALREGYEEFFEALQAHEIPLLIFSAGIG-DIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSV  214 (298)
T ss_pred             hHHHHHHHHHHHHHHHhCCCceEEEecchH-HHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHH
Confidence            467788999999999999999999999999 88888877654332222          01121211111  1        


Q ss_pred             HHHHHHHhC--CCCccEEEEeCCccccccccc
Q psy8911          70 FANLKKATG--IEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        70 ~~~~~~~~g--~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      .+...+.+.  -.-.++++.|||.-|+..|--
T Consensus       215 ~~~~s~yf~~~~~~~nVillGdsigdl~ma~g  246 (298)
T KOG3128|consen  215 LQNESEYFHQLAGRVNVILLGDSIGDLHMADG  246 (298)
T ss_pred             HHhhhHHHhhccCCceEEEeccccccchhhcC
Confidence            222233332  356789999999988766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	280
2wm8_A	187	Crystal Structure Of Human Magnesium-Dependent Phos		1e-34
1u7o_A	164	Magnesium Dependent Phosphatase 1 (Mdp-1) Length =		2e-34

>pdb|2WM8|A Chain A, Crystal Structure Of Human Magnesium-Dependent Phosphatase 1 Of The Haloacid Dehalogenase Superfamily (Mgc5987) Length = 187

Iteration: 1
 Score =  143 bits (360), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/147 (51%), Positives = 96/147 (65%), Gaps = 2/147 (1%)
Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V  PF K     V D +G  ++ Y  VPE+L+ L+      AAASRT
Sbjct: 34  LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRT 93
Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
           SEI  A Q+L L +L +YF ++EIYPG K THFE L++ TGI +  M+FFDDE RN  DV
Sbjct: 94  SEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDV 153
Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
           S LGVTCIH++ GM+   L +GL+ +A
Sbjct: 154 SKLGVTCIHIQNGMNLQTLSQGLETFA 180

>pdb|1U7O|A Chain A, Magnesium Dependent Phosphatase 1 (Mdp-1) Length = 164

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/147 (52%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V  PF K     V D +G  I+ Y  VPE+L  L+     VAAASRT
Sbjct: 12  LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRT 71
Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
           SEI  A Q+L L +L +YF  +EIYPG K THFE L   TG+ +  MVFFDDE RN  DV
Sbjct: 72  SEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDV 131
Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWA 277
             LGVTCIH++ GMS   L +GL+ +A
Sbjct: 132 GRLGVTCIHIRDGMSLQTLTQGLETFA 158

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	280
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	4e-45
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	1e-36
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	7e-07
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	9e-05

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187

 Score =  149 bits (378), Expect = 4e-45
 Identities = 75/149 (50%), Positives = 96/149 (64%), Gaps = 2/149 (1%)

Query: 133 LDYTLWPLHVHDLV-APFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   V  PF K     V D +G  ++ Y  VPE+L+ L+      AAASRT
Sbjct: 34  LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRT 93

Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
           SEI  A Q+L L +L +YF ++EIYPG K THFE L++ TGI +  M+FFDDE RN  DV
Sbjct: 94  SEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDV 153

Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWASK 279
           S LGVTCIH++ GM+   L +GL+ +A  
Sbjct: 154 SKLGVTCIHIQNGMNLQTLSQGLETFAKA 182

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187

 Score =  128 bits (322), Expect = 1e-36
 Identities = 60/111 (54%), Positives = 79/111 (71%)

Query: 2   KVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQI 61
            V D RG  ++ YP+VP +LK L+      AAASRTSEI+GA QLL+LF+  +YF H++I
Sbjct: 58  TVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREI 117

Query: 62  FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112
           +PG K THF  L++ TGI +  M+FFDDE RN  DVS LGVTCI +++GM 
Sbjct: 118 YPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMN 168

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	280
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.95
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.88
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.88
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.87
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.85
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.84
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.84
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.84
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.84
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.83
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.82
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.81
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.8
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.8
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.8
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.8
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.8
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.8
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.79
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.79
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.79
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.79
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.79
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.78
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.78
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.78
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.77
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.77
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.77
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.77
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.77
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.77
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.77
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.77
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.77
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.77
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.76
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.76
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.76
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.75
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.75
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.75
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.75
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.75
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.74
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.74
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.74
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.74
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.74
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.73
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.73
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.73
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.73
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.73
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.73
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.73
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.72
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.72
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.72
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.71
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.71
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.71
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.7
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.7
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.7
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.7
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.69
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.69
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.69
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.69
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.69
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.69
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.68
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.68
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.68
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.68
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.68
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.67
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.67
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.67
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.67
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.67
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.66
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.66
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.66
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.66
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.66
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.66
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.66
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.66
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.65
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.65
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.65
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.65
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.64
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.64
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.64
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.64
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.64
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.64
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.64
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.64
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.64
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.64
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.64
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.64
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.64
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.64
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.63
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.63
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.63
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.63
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.62
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.62
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.62
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.62
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.62
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.62
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.62
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.62
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.62
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.62
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.61
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.61
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.61
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.6
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.6
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.6
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.6
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.6
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.6
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.59
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.59
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.59
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.59
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.59
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.59
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.58
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.58
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.58
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.57
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.57
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.57
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.57
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.57
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.57
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.56
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.56
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.56
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.56
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.56
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.55
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.54
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	99.53
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.53
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.53
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.52
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.52
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.51
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.51
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.51
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.5
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.5
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.5
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.5
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.5
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.49
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.49
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.49
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.48
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.48
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.48
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.47
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.47
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.46
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.46
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.46
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.46
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.46
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.45
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.45
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.45
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.45
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.45
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.44
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.41
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.4
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.4
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.37
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.36
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.36
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.36
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.36
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.36
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.35
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.34
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.34
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.34
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.33
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.32
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.32
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.31
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.3
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.29
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.29
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.29
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.28
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.28
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.28
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	99.27
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.92
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.92
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.26
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.26
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.24
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.24
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.23
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	99.23
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.22
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.2
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.19
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.18
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.17
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.16
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.15
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.15
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.15
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.14
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.12
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.1
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.08
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.05
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.04
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.02
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.0
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	99.0
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	98.99
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.96
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	98.96
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.92
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	98.88
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	98.85
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	98.78
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.77
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	98.73
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	98.66
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.66
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	98.65
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	98.63
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.62
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.61
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.48
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.41
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	98.31
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.26
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	98.24
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.22
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.22
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	98.15
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	98.15
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.07
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.06
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.05
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	98.04
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.03
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.02
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.99
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	97.94
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.92
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	97.87
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	97.79
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	97.79
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	97.78
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	97.77
4gxt_A	385	A conserved functionally unknown protein; structur	97.75
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.74
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.74
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	97.7
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.69
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	97.66
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.62
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	97.61
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	97.6
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.58
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	97.54
4gxt_A	385	A conserved functionally unknown protein; structur	97.52
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	97.5
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	97.46
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	97.45
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	97.42
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	97.38
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	97.23
3dao_A	283	Putative phosphatse; structural genomics, joint ce	97.22
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.2
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.17
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	97.15
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	97.07
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	97.05
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	97.04
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	96.93
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	96.82
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	96.76
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	96.74
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.73
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.71
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	96.63
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	96.61
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	96.53
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	96.5
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	96.47
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	96.39
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	96.28
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	96.26
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	96.11
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	96.09
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	95.94
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	95.78
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	95.74
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	95.56
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	95.42
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	95.07
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	94.81
3luf_A	259	Two-component system response regulator/ggdef doma	93.25
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	91.02
2q5c_A	196	NTRC family transcriptional regulator; structural	89.01
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	88.82
2q5c_A	196	NTRC family transcriptional regulator; structural	88.76
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	86.84
3d8t_A	286	Uroporphyrinogen-III synthase; heme biosynthesis,	85.0
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	84.4
4es6_A	254	Uroporphyrinogen-III synthase; heme-biosynthesis,	84.28
2pju_A	225	Propionate catabolism operon regulatory protein; s	80.69
2pju_A	225	Propionate catabolism operon regulatory protein; s	80.36

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.95  E-value=4.1e-27  Score=192.02  Aligned_cols=154  Identities=47%  Similarity=0.792  Sum_probs=136.5

Q ss_pred             cceeEEEecCCCCCCccccccc-CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc-HHHHHHHHh
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE-ILHAKQILN  201 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~-~~~~~~~l~  201 (280)
                      ++++++||+|||||+.+..... +++.... ..+.+.+.....++||+.++|+.|+++|++++|+||+ . ...++..++
T Consensus        26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~-~~~~~~~~~l~  104 (187)
T 2wm8_A           26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRT-SEIEGANQLLE  104 (187)
T ss_dssp             SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECC-SCHHHHHHHHH
T ss_pred             ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCC-CChHHHHHHHH
Confidence            4689999999999988776655 5544332 4556666778899999999999999999999999999 7 688999999


Q ss_pred             hCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHHHHHHHHHHhc
Q psy8911         202 LINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWASK  279 (280)
Q Consensus       202 ~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~  279 (280)
                      .+|+.++|+.+.+.+++|++.|..+++++|++|++|+||||+.+|+++|+++|+.+++|.+|+....+.+.+..|.++
T Consensus       105 ~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~l~~~~~~  182 (187)
T 2wm8_A          105 LFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAKA  182 (187)
T ss_dssp             HTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSCCHHHHHHHHHHHHHT
T ss_pred             HcCcHhhcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence            999999999866667889999999999999999999999999999999999999999999999999999999999865

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.88  E-value=2.4e-22  Score=164.04  Aligned_cols=130  Identities=17%  Similarity=0.118  Sum_probs=106.9

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH---HHHHHHHhh
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI---LHAKQILNL  202 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~---~~~~~~l~~  202 (280)
                      .+.++||+||||++.....+.        .........+.++||+.++|+.|+++|++++|+||+ ..   ..+...++.
T Consensus         3 ik~vifD~DgtL~~~~~~~y~--------~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~-~~~~~~~~~~~l~~   73 (189)
T 3ib6_A            3 LTHVIWDMGETLNTVPNTRYD--------HHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNT-ATSDTEVIKRVLTN   73 (189)
T ss_dssp             CCEEEECTBTTTBCCCTTSSC--------SSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECC-SSCCHHHHHHHHHH
T ss_pred             ceEEEEcCCCceeeccchhhh--------hHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECC-CccchHHHHHHHHh
Confidence            468999999999873322111        000112235789999999999999999999999999 65   788999999


Q ss_pred             CCCccccccceEec---------CCCHHHHHHHHHHcCCCCCcEEEEeCC-cCCcccccccCceEEEECCCC
Q psy8911         203 INLNQYFSNKEIYP---------GPKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       203 ~gl~~~f~~~~~~~---------~~k~~~~~~~~~~~~~~~~~~l~igD~-~~di~~a~~aG~~~i~v~~g~  264 (280)
                      +|+.+||+.+....         +|++..|..+++++|++|++|+||||+ ..|+.+|+++||.+++|.++.
T Consensus        74 ~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~  145 (189)
T 3ib6_A           74 FGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPE  145 (189)
T ss_dssp             TTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTT
T ss_pred             cCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCcc
Confidence            99999999765432         467789999999999999999999999 799999999999999998654

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.88  E-value=3e-23  Score=171.90  Aligned_cols=102  Identities=22%  Similarity=0.314  Sum_probs=92.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....+...++.+|+.+||+.+..+.     +|+|+.|+.+++++|++|++|
T Consensus        82 ~~~~~pg~~~~l~~L~~~g~~~~i~tn~-~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~  160 (216)
T 3kbb_A           82 LLKENPGVREALEFVKSKRIKLALATST-PQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKV  160 (216)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGE
T ss_pred             hcccCccHHHHHHHHHHcCCCcccccCC-cHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccce
Confidence            3578999999999999999999999999 8889999999999999999754432     477899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEE-ECCCCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIH-VKKGMS  265 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~-v~~g~~  265 (280)
                      +||||+++|+++|+++||++|+ |++|..
T Consensus       161 l~VgDs~~Di~aA~~aG~~~i~~v~~g~~  189 (216)
T 3kbb_A          161 VVFEDSKSGVEAAKSAGIERIYGVVHSLN  189 (216)
T ss_dssp             EEEECSHHHHHHHHHTTCCCEEEECCSSS
T ss_pred             EEEecCHHHHHHHHHcCCcEEEEecCCCC
Confidence            9999999999999999999985 787764

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.87  E-value=2.3e-22  Score=162.27  Aligned_cols=128  Identities=10%  Similarity=0.065  Sum_probs=104.3

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-------------
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI-------------  193 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~-------------  193 (280)
                      +++.||+||||++... .+            ......++++||+.++|+.|+++|++++|+||+ ..             
T Consensus         2 k~v~~D~DGtL~~~~~-~~------------~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~-~~~~~~~~~~~~~~~   67 (179)
T 3l8h_A            2 KLIILDRDGVVNQDSD-AF------------VKSPDEWIALPGSLQAIARLTQADWTVVLATNQ-SGLARGLFDTATLNA   67 (179)
T ss_dssp             CEEEECSBTTTBCCCT-TC------------CCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEEC-TTTTTTSSCHHHHHH
T ss_pred             CEEEEcCCCccccCCC-cc------------CCCHHHceECcCHHHHHHHHHHCCCEEEEEECC-CccccCcCCHHHHHH
Confidence            5789999999986321 11            122345789999999999999999999999999 54             


Q ss_pred             --HHHHHHHhhCC--Cccccccce------EecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         194 --LHAKQILNLIN--LNQYFSNKE------IYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       194 --~~~~~~l~~~g--l~~~f~~~~------~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                        ..+...++++|  ++.+|....      ...+|+++.|+.+++++|++|++|+||||+.+|+++|+++||++++|.+|
T Consensus        68 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g  147 (179)
T 3l8h_A           68 IHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG  147 (179)
T ss_dssp             HHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred             HHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC
Confidence              56788899999  776663211      12358889999999999999999999999999999999999999999998


Q ss_pred             CCHHH
Q psy8911         264 MSHAV  268 (280)
Q Consensus       264 ~~~~~  268 (280)
                      .....
T Consensus       148 ~~~~~  152 (179)
T 3l8h_A          148 NGRKT  152 (179)
T ss_dssp             THHHH
T ss_pred             Ccchh
Confidence            75444

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.85  E-value=4.3e-22  Score=168.72  Aligned_cols=99  Identities=17%  Similarity=0.258  Sum_probs=88.6

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcEE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      ..++||+.++|+.|+++|++++++||+ ..  +...++++|+.+||+.+..+     .+|+|+.|+.+++++|++|++|+
T Consensus        94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~-~~--~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l  170 (243)
T 4g9b_A           94 NAVLPGIRSLLADLRAQQISVGLASVS-LN--APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACI  170 (243)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC-TT--HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred             ccccccHHHHHHhhhcccccceecccc-cc--hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEE
Confidence            468999999999999999999999998 53  46679999999999975433     24778999999999999999999


Q ss_pred             EEeCCcCCcccccccCceEEEECCCCC
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      ||||+++|+++|+++||++|+|++|++
T Consensus       171 ~VgDs~~di~aA~~aG~~~I~V~~g~~  197 (243)
T 4g9b_A          171 GIEDAQAGIDAINASGMRSVGIGAGLT  197 (243)
T ss_dssp             EEESSHHHHHHHHHHTCEEEEESTTCC
T ss_pred             EEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence            999999999999999999999998764

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.84  E-value=3.7e-21  Score=158.05  Aligned_cols=125  Identities=11%  Similarity=-0.009  Sum_probs=97.0

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      .++++||+||||.|.........+         .....+.++||+.++|+.|+++|++++|+||+ ....+...++    
T Consensus         6 ~kav~fDlDGTL~d~~~~~~~~~~---------~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~-~~~~~~~~~~----   71 (196)
T 2oda_A            6 FPALLFGLSGCLVDFGAQAATSDT---------PDDEHAQLTPGAQNALKALRDQGMPCAWIDEL-PEALSTPLAA----   71 (196)
T ss_dssp             CSCEEEETBTTTBCTTSTTTSCSS---------CCGGGGSBCTTHHHHHHHHHHHTCCEEEECCS-CHHHHHHHHT----
T ss_pred             CCEEEEcCCCceEeccccccchhh---------cccccCCcCcCHHHHHHHHHHCCCEEEEEcCC-hHHHHHHhcC----
Confidence            478999999999873211100000         02234679999999999999999999999999 7766644433    


Q ss_pred             ccccccceEec-----CCCHHHHHHHHHHcCCCC-CcEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         206 NQYFSNKEIYP-----GPKTTHFESLKKATGIEY-KDMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       206 ~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~-~~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                       .+|+.+.+..     +|+|+.|..+++++|+.| ++|+||||+.+|+++|+++||.+|+|.+|..
T Consensus        72 -~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~  136 (196)
T 2oda_A           72 -PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGP  136 (196)
T ss_dssp             -TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSST
T ss_pred             -ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCc
Confidence             4667654432     477899999999999975 8999999999999999999999999998763

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.84  E-value=2.1e-21  Score=161.26  Aligned_cols=124  Identities=13%  Similarity=0.073  Sum_probs=103.1

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc------------
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE------------  192 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~------------  192 (280)
                      ..+++.||+||||++...  +            ......+.++||+.++|+.|+++|++++|+||+ .            
T Consensus        24 ~~k~v~~D~DGTL~~~~~--~------------~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~-~~~~~~~~~~~~~   88 (211)
T 2gmw_A           24 SVPAIFLDRDGTINVDHG--Y------------VHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQ-SGIARGKFTEAQF   88 (211)
T ss_dssp             CBCEEEECSBTTTBCCCS--S------------CCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEEC-THHHHTSSCHHHH
T ss_pred             cCCEEEEcCCCCeECCCC--c------------ccCcccCcCCcCHHHHHHHHHHCCCeEEEEECc-CCcCCCccCHHHH
Confidence            357899999999986421  1            112345789999999999999999999999999 6            


Q ss_pred             ---HHHHHHHHhhCCCccccccceEe-----------------cCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccc
Q psy8911         193 ---ILHAKQILNLINLNQYFSNKEIY-----------------PGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSP  252 (280)
Q Consensus       193 ---~~~~~~~l~~~gl~~~f~~~~~~-----------------~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~  252 (280)
                         ...++..++.+|+.  |+.+...                 .+|++..|..+++++|++|++|+||||+.+|+++|++
T Consensus        89 ~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~  166 (211)
T 2gmw_A           89 ETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVA  166 (211)
T ss_dssp             HHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH
Confidence               46788899999987  5543221                 3477899999999999999999999999999999999


Q ss_pred             cCceE-EEECCCCC
Q psy8911         253 LGVTC-IHVKKGMS  265 (280)
Q Consensus       253 aG~~~-i~v~~g~~  265 (280)
                      +|+.+ ++|.+|..
T Consensus       167 aG~~~~i~v~~g~~  180 (211)
T 2gmw_A          167 ANVGTKVLVRTGKP  180 (211)
T ss_dssp             TTCSEEEEESSSSC
T ss_pred             CCCceEEEEecCCC
Confidence            99999 99998764

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.84  E-value=1.8e-21  Score=165.44  Aligned_cols=97  Identities=14%  Similarity=0.178  Sum_probs=86.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++++|++ ..  +...|+++|+.+||+.+.+++     +|+|+.|..+++++|++|++|
T Consensus       114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~-~~--~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~  190 (250)
T 4gib_A          114 SNDILPGIESLLIDVKSNNIKIGLSSAS-KN--AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNC  190 (250)
T ss_dssp             GGGSCTTHHHHHHHHHHTTCEEEECCSC-TT--HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             ccccchhHHHHHHHHHhccccccccccc-ch--hhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHe
Confidence            4568999999999999999999998887 43  456899999999999764432     477899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +||||++.|+++|++|||.+|+|++
T Consensus       191 l~VGDs~~Di~aA~~aG~~~i~v~~  215 (250)
T 4gib_A          191 IGIEDASAGIDAINSANMFSVGVGN  215 (250)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEEESC
T ss_pred             EEECCCHHHHHHHHHcCCEEEEECC
Confidence            9999999999999999999999964

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.84  E-value=7.4e-22  Score=151.69  Aligned_cols=114  Identities=15%  Similarity=0.055  Sum_probs=101.6

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      +++.||+||||++                       ...++||+.++|+.|+++|++++|+||+ ....++..++.+|+.
T Consensus         3 k~i~~D~DgtL~~-----------------------~~~~~~~~~~~l~~L~~~G~~~~i~S~~-~~~~~~~~l~~~~l~   58 (137)
T 2pr7_A            3 RGLIVDYAGVLDG-----------------------TDEDQRRWRNLLAAAKKNGVGTVILSND-PGGLGAAPIRELETN   58 (137)
T ss_dssp             CEEEECSTTTTSS-----------------------CHHHHHHHHHHHHHHHHTTCEEEEEECS-CCGGGGHHHHHHHHT
T ss_pred             cEEEEeccceecC-----------------------CCccCccHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHCChH
Confidence            6789999999964                       2568899999999999999999999999 777788889999999


Q ss_pred             cccccceEe-----cCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         207 QYFSNKEIY-----PGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       207 ~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      ++|+.+...     .+|+++.|..++++++++|++++||||+..|+++|+++|+.++++.++.
T Consensus        59 ~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~  121 (137)
T 2pr7_A           59 GVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFD  121 (137)
T ss_dssp             TSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCHH
T ss_pred             hhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCChH
Confidence            999976543     3577889999999999999999999999999999999999999998754

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.83  E-value=4.9e-21  Score=154.63  Aligned_cols=134  Identities=13%  Similarity=0.115  Sum_probs=103.1

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCC--------------
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTS--------------  191 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~--------------  191 (280)
                      .+++.||+||||+......           ........+.++||+.++|+.|+++|++++|+||+.              
T Consensus        14 ~k~~~~D~Dgtl~~~~~~~-----------~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~   82 (176)
T 2fpr_A           14 QKYLFIDRDGTLISEPPSD-----------FQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDG   82 (176)
T ss_dssp             CEEEEECSBTTTBCCC--C-----------CCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHH
T ss_pred             CcEEEEeCCCCeEcCCCCC-----------cCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhh
Confidence            4789999999998642111           111233457899999999999999999999999982              


Q ss_pred             cHHHHHHHHhhCCCccccccceEe----------cCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         192 EILHAKQILNLINLNQYFSNKEIY----------PGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       192 ~~~~~~~~l~~~gl~~~f~~~~~~----------~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ....++..++.+|+.  |+.+...          .+|+++.|+.++++++++|++|+||||+..|+++|+++||.+++|.
T Consensus        83 ~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~  160 (176)
T 2fpr_A           83 PHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD  160 (176)
T ss_dssp             HHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred             hHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence            356778899999997  7765332          2477789999999999999999999999999999999999999998


Q ss_pred             CCC-CHHHHHHH
Q psy8911         262 KGM-SHAVLQKG  272 (280)
Q Consensus       262 ~g~-~~~~~~~~  272 (280)
                      .+. .|+.+...
T Consensus       161 ~~~~~~~~~~~~  172 (176)
T 2fpr_A          161 RETLNWPMIGEQ  172 (176)
T ss_dssp             TTTBCHHHHHHH
T ss_pred             CCcccHHHHHHH
Confidence            764 57665443

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.82  E-value=9.8e-21  Score=157.22  Aligned_cols=102  Identities=21%  Similarity=0.312  Sum_probs=94.9

Q ss_pred             ceeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911         162 TLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFF  240 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~i  240 (280)
                      ..+.++||+.++|+.|+++| ++++++||+ ....+...++.+|+.++|+.+...++||+..|..+++++|++|++|++|
T Consensus       102 ~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~-~~~~~~~~l~~~~~~~~f~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~i  180 (234)
T 3ddh_A          102 MPIELLPGVKETLKTLKETGKYKLVVATKG-DLLDQENKLERSGLSPYFDHIEVMSDKTEKEYLRLLSILQIAPSELLMV  180 (234)
T ss_dssp             CCCCBCTTHHHHHHHHHHHCCCEEEEEEES-CHHHHHHHHHHHTCGGGCSEEEEESCCSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             ccCCcCccHHHHHHHHHhCCCeEEEEEeCC-chHHHHHHHHHhCcHhhhheeeecCCCCHHHHHHHHHHhCCCcceEEEE
Confidence            45688999999999999999 999999999 8888899999999999999887778899999999999999999999999


Q ss_pred             eCCc-CCcccccccCceEEEECCCC
Q psy8911         241 DDEE-RNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       241 gD~~-~di~~a~~aG~~~i~v~~g~  264 (280)
                      ||+. +|+.+|+++|+.+++|++|.
T Consensus       181 GD~~~~Di~~a~~aG~~~v~v~~~~  205 (234)
T 3ddh_A          181 GNSFKSDIQPVLSLGGYGVHIPFEV  205 (234)
T ss_dssp             ESCCCCCCHHHHHHTCEEEECCCCT
T ss_pred             CCCcHHHhHHHHHCCCeEEEecCCc
Confidence            9997 99999999999999996554

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.81  E-value=1.4e-20  Score=156.22  Aligned_cols=106  Identities=23%  Similarity=0.258  Sum_probs=95.3

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+....     +|++..|..+++++|++|++|
T Consensus        84 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  162 (226)
T 3mc1_A           84 ENKVYDGIEALLSSLKDYGFHLVVATSK-PTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDA  162 (226)
T ss_dssp             SCCBCTTHHHHHHHHHHHTCEEEEEEEE-EHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence            4579999999999999999999999999 8899999999999999999765443     377899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCC-CHHHH
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGM-SHAVL  269 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~-~~~~~  269 (280)
                      ++|||+.+|+.+|+++|+.+++|.+|. ....+
T Consensus       163 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~  195 (226)
T 3mc1_A          163 IMIGDREYDVIGALKNNLPSIGVTYGFGSYEEL  195 (226)
T ss_dssp             EEEESSHHHHHHHHTTTCCEEEESSSSSCHHHH
T ss_pred             EEECCCHHHHHHHHHCCCCEEEEccCCCCHHHH
Confidence            999999999999999999999999876 44444

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.80  E-value=4.6e-20  Score=153.75  Aligned_cols=102  Identities=22%  Similarity=0.200  Sum_probs=92.8

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+...     .+|++..|..+++++|++|++
T Consensus        80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  158 (222)
T 2nyv_A           80 VYTKPYPEIPYTLEALKSKGFKLAVVSNK-LEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEK  158 (222)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGG
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchh
Confidence            45789999999999999999999999999 888899999999999999975432     247889999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      |+||||+.+|+.+|+++|+.+++|.+|.
T Consensus       159 ~~~vGD~~~Di~~a~~aG~~~i~v~~g~  186 (222)
T 2nyv_A          159 ALIVGDTDADIEAGKRAGTKTALALWGY  186 (222)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEEETTSS
T ss_pred             EEEECCCHHHHHHHHHCCCeEEEEcCCC
Confidence            9999999999999999999999998764

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.80  E-value=1.5e-19  Score=150.73  Aligned_cols=103  Identities=19%  Similarity=0.170  Sum_probs=92.5

Q ss_pred             CceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCC
Q psy8911         161 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       161 ~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~  235 (280)
                      .....++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+....     +|+++.|..+++++|++|+
T Consensus        99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~-~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~  177 (231)
T 3kzx_A           99 SDNFMLNDGAIELLDTLKENNITMAIVSNK-NGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPS  177 (231)
T ss_dssp             CCCCEECTTHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCS
T ss_pred             cccceECcCHHHHHHHHHHCCCeEEEEECC-CHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcc
Confidence            346789999999999999999999999999 8899999999999999999765543     3778999999999999999


Q ss_pred             -cEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         236 -DMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       236 -~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                       ++++|||+.+|+++|+++|+.++++.++.
T Consensus       178 ~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~  207 (231)
T 3kzx_A          178 KEVFFIGDSISDIQSAIEAGCLPIKYGSTN  207 (231)
T ss_dssp             TTEEEEESSHHHHHHHHHTTCEEEEECC--
T ss_pred             cCEEEEcCCHHHHHHHHHCCCeEEEECCCC
Confidence             99999999999999999999999997653

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.80  E-value=5.5e-20  Score=150.59  Aligned_cols=99  Identities=13%  Similarity=0.122  Sum_probs=91.4

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcEE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      ..++||+.++|+.|+++|++++++||+ ....++..++++|+.++|+.+....     +|++..|..+++++|++|++|+
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  166 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQGLEIGLASSS-VKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL  166 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CCcCchHHHHHHHHHHCCCCEEEEeCC-cHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeE
Confidence            478999999999999999999999999 8889999999999999999764432     4778999999999999999999


Q ss_pred             EEeCCcCCcccccccCceEEEECCC
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +|||+.+|+.+|+++|+.++++.++
T Consensus       167 ~iGD~~~Di~~a~~aG~~~~~~~~~  191 (214)
T 3e58_A          167 IIEDSEKGIAAGVAADVEVWAIRDN  191 (214)
T ss_dssp             EEECSHHHHHHHHHTTCEEEEECCS
T ss_pred             EEeccHhhHHHHHHCCCEEEEECCC
Confidence            9999999999999999999999865

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.80  E-value=3e-20  Score=152.58  Aligned_cols=102  Identities=19%  Similarity=0.129  Sum_probs=91.8

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc--ccceEe----cCCCHHHHHHHHHHcCCCCC
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF--SNKEIY----PGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f--~~~~~~----~~~k~~~~~~~~~~~~~~~~  235 (280)
                      ....++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|  +.+...    .+|++..|..+++++|++|+
T Consensus        67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~  145 (205)
T 3m9l_A           67 QGSRPAPGAVELVRELAGRGYRLGILTRN-ARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPS  145 (205)
T ss_dssp             EEEEECTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGG
T ss_pred             hcCCCCccHHHHHHHHHhcCCeEEEEeCC-chHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence            45689999999999999999999999999 888999999999999999  544322    24778899999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      +|++|||+.+|+++|+++|+.+|++.++.
T Consensus       146 ~~i~iGD~~~Di~~a~~aG~~~i~v~~~~  174 (205)
T 3m9l_A          146 RMVMVGDYRFDLDCGRAAGTRTVLVNLPD  174 (205)
T ss_dssp             GEEEEESSHHHHHHHHHHTCEEEECSSSS
T ss_pred             HEEEECCCHHHHHHHHHcCCEEEEEeCCC
Confidence            99999999999999999999999998764

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.80  E-value=6e-20  Score=153.65  Aligned_cols=108  Identities=21%  Similarity=0.157  Sum_probs=95.7

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.+...     .+|++..|..+++++|++|++
T Consensus       101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~  179 (237)
T 4ex6_A          101 GPRLLYPGVLEGLDRLSAAGFRLAMATSK-VEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPER  179 (237)
T ss_dssp             GGGGBCTTHHHHHHHHHHTTEEEEEECSS-CHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred             cCCccCCCHHHHHHHHHhCCCcEEEEcCC-ChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            44669999999999999999999999999 888899999999999999975433     247889999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCC-CHHHHH
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGM-SHAVLQ  270 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~-~~~~~~  270 (280)
                      |++|||+.+|+.+|+++|+.+++|.+|. ....++
T Consensus       180 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~  214 (237)
T 4ex6_A          180 CVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELM  214 (237)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHH
T ss_pred             eEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHH
Confidence            9999999999999999999999999875 334443

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.80  E-value=4.7e-20  Score=155.00  Aligned_cols=100  Identities=14%  Similarity=0.195  Sum_probs=91.5

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcEE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      +.++||+.++|+.|+++|++++|+||+ ....++..++.+|+..+|+.+....     +|++..|..+++++|++|++|+
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  182 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNG-NDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC  182 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            578899999999999999999999999 8888999999999999999754432     4778899999999999999999


Q ss_pred             EEeCCcCCcccccccCceEEEECCCC
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      ||||+.+|+++|+++|+.+++|.+|.
T Consensus       183 ~iGD~~~Di~~a~~aG~~~~~v~~~~  208 (240)
T 2no4_A          183 FVSSNAWDLGGAGKFGFNTVRINRQG  208 (240)
T ss_dssp             EEESCHHHHHHHHHHTCEEEEECTTC
T ss_pred             EEeCCHHHHHHHHHCCCEEEEECCCC
Confidence            99999999999999999999998764

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.79  E-value=5.2e-20  Score=153.69  Aligned_cols=100  Identities=16%  Similarity=0.246  Sum_probs=91.2

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+....     +|++..|..+++++|++|++|
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~  171 (232)
T 1zrn_A           93 RLAPFSEVPDSLRELKRRGLKLAILSNG-SPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI  171 (232)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred             cCCCCccHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence            4578999999999999999999999999 8888999999999999999764432     477889999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +||||+.+|+.+|+++|+.++++.++
T Consensus       172 ~~iGD~~~Di~~a~~aG~~~~~~~~~  197 (232)
T 1zrn_A          172 LFVASNAWDATGARYFGFPTCWINRT  197 (232)
T ss_dssp             EEEESCHHHHHHHHHHTCCEEEECTT
T ss_pred             EEEeCCHHHHHHHHHcCCEEEEEcCC
Confidence            99999999999999999999999865

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.79  E-value=7.7e-20  Score=152.04  Aligned_cols=102  Identities=13%  Similarity=0.177  Sum_probs=92.6

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+....     +|++..|..+++++|++|++
T Consensus        93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  171 (230)
T 3um9_A           93 LSLTPFADVPQALQQLRAAGLKTAILSNG-SRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESE  171 (230)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             hcCCCCCCHHHHHHHHHhCCCeEEEEeCC-CHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCccc
Confidence            35678999999999999999999999999 8888999999999999999764432     47789999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      |++|||+.+|+.+|+++|+.++++.++.
T Consensus       172 ~~~iGD~~~Di~~a~~aG~~~~~~~~~~  199 (230)
T 3um9_A          172 ILFVSCNSWDATGAKYFGYPVCWINRSN  199 (230)
T ss_dssp             EEEEESCHHHHHHHHHHTCCEEEECTTS
T ss_pred             EEEEeCCHHHHHHHHHCCCEEEEEeCCC
Confidence            9999999999999999999999998653

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.79  E-value=8.3e-20  Score=151.97  Aligned_cols=108  Identities=18%  Similarity=0.132  Sum_probs=95.8

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+...     .+|++..|..+++++|++|++|
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~  167 (233)
T 3s6j_A           89 QIIALPGAVELLETLDKENLKWCIATSG-GIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDEC  167 (233)
T ss_dssp             GCEECTTHHHHHHHHHHTTCCEEEECSS-CHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGE
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCC-chhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHE
Confidence            4688999999999999999999999999 888899999999999999975433     2477899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCC-CCHHHHHH
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKG-MSHAVLQK  271 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g-~~~~~~~~  271 (280)
                      ++|||+.+|+.+|+++|+.+++|.+| .....++.
T Consensus       168 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~  202 (233)
T 3s6j_A          168 LVIGDAIWDMLAARRCKATGVGLLSGGYDIGELER  202 (233)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHH
T ss_pred             EEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHh
Confidence            99999999999999999999999876 44555443

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.79  E-value=1.5e-19  Score=150.62  Aligned_cols=125  Identities=9%  Similarity=-0.047  Sum_probs=101.2

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-----------
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEI-----------  193 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~-----------  193 (280)
                      +.+.+.||+|||||+....              ........++||+.++|+.|+++|++++|+||+ ..           
T Consensus        30 ~~k~i~~D~DGtl~~~~~y--------------~~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~-~~~~~~~~~~~~~   94 (218)
T 2o2x_A           30 HLPALFLDRDGTINVDTDY--------------PSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQ-SGIARGYFGWSAF   94 (218)
T ss_dssp             SCCCEEECSBTTTBCCCSC--------------TTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEEC-HHHHTTSCCHHHH
T ss_pred             cCCEEEEeCCCCcCCCCcc--------------cCCcccCeECcCHHHHHHHHHHCCCEEEEEcCc-CCCCcccccHHHH
Confidence            4578999999999863111              112335678999999999999999999999999 76           


Q ss_pred             ----HHHHHHHhhCCCc--cccccc-------------eEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccC
Q psy8911         194 ----LHAKQILNLINLN--QYFSNK-------------EIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLG  254 (280)
Q Consensus       194 ----~~~~~~l~~~gl~--~~f~~~-------------~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG  254 (280)
                          ..+...++++|+.  .+|...             ....+|++..|..+++++|++|++|+||||+.+|+.+|+++|
T Consensus        95 ~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG  174 (218)
T 2o2x_A           95 AAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAG  174 (218)
T ss_dssp             HHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCC
Confidence                6788899999975  222211             011247789999999999999999999999999999999999


Q ss_pred             ceE-EEECCCC
Q psy8911         255 VTC-IHVKKGM  264 (280)
Q Consensus       255 ~~~-i~v~~g~  264 (280)
                      +.+ ++|.+|.
T Consensus       175 ~~~~i~v~~g~  185 (218)
T 2o2x_A          175 LAQGWLVDGEA  185 (218)
T ss_dssp             CSEEEEETCCC
T ss_pred             CCEeEEEecCC
Confidence            999 9998875

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.78  E-value=5.6e-20  Score=153.33  Aligned_cols=100  Identities=11%  Similarity=0.129  Sum_probs=91.5

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+....     +|++..|..+++++|++|++|
T Consensus        97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  175 (233)
T 3umb_A           97 CLSAFPENVPVLRQLREMGLPLGILSNG-NPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQI  175 (233)
T ss_dssp             SCEECTTHHHHHHHHHTTTCCEEEEESS-CHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGE
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCC-CHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccE
Confidence            4678999999999999999999999999 8888999999999999999764432     477889999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +||||+.+|+.+|+++|+.+++|.++
T Consensus       176 ~~vGD~~~Di~~a~~~G~~~~~v~~~  201 (233)
T 3umb_A          176 LFVSSNGWDACGATWHGFTTFWINRL  201 (233)
T ss_dssp             EEEESCHHHHHHHHHHTCEEEEECTT
T ss_pred             EEEeCCHHHHHHHHHcCCEEEEEcCC
Confidence            99999999999999999999999764

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.78  E-value=2.5e-19  Score=148.00  Aligned_cols=104  Identities=10%  Similarity=0.178  Sum_probs=94.3

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec---CCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP---GPKTTHFESLKKATGIEYKDMVFF  240 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~---~~k~~~~~~~~~~~~~~~~~~l~i  240 (280)
                      +.++||+.++|+.|++ |++++|+||+ ....++..++++|+.+||+.+.+.+   +|+|+.|+.+++++|++|++|+||
T Consensus        83 ~~~~~g~~~~l~~L~~-~~~l~i~T~~-~~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v  160 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSS-SYPLYITTTK-DTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIII  160 (210)
T ss_dssp             CEECTTHHHHHHHHHT-TSCEEEEEEE-EHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCCCCCHHHHHHHHHc-CCeEEEEeCC-CHHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence            5789999999999999 9999999999 8888999999999999999765543   578899999999999999999999


Q ss_pred             eCCcCCcccccccCceEEEECCCCC-HHHH
Q psy8911         241 DDEERNSHDVSPLGVTCIHVKKGMS-HAVL  269 (280)
Q Consensus       241 gD~~~di~~a~~aG~~~i~v~~g~~-~~~~  269 (280)
                      ||+.+|+++|+++|+++++|.+|.. ..++
T Consensus       161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l  190 (210)
T 2ah5_A          161 GDTKFDMLGARETGIQKLAITWGFGEQADL  190 (210)
T ss_dssp             ESSHHHHHHHHHHTCEEEEESSSSSCHHHH
T ss_pred             CCCHHHHHHHHHCCCcEEEEcCCCCCHHHH
Confidence            9999999999999999999998765 4444

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.78  E-value=1.2e-19  Score=152.37  Aligned_cols=106  Identities=18%  Similarity=0.272  Sum_probs=95.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCC-CCc
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIE-YKD  236 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~-~~~  236 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+....     +|++..|..+++++|++ |++
T Consensus       108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~  186 (240)
T 3sd7_A          108 ENKIYENMKEILEMLYKNGKILLVATSK-PTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDK  186 (240)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred             ccccCccHHHHHHHHHHCCCeEEEEeCC-cHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence            3679999999999999999999999999 8999999999999999999765443     37788899999999999 999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCC-HHHH
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS-HAVL  269 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~-~~~~  269 (280)
                      |++|||+.+|+++|+++|+.+++|.+|.. ...+
T Consensus       187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~  220 (240)
T 3sd7_A          187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEI  220 (240)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHH
T ss_pred             EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHH
Confidence            99999999999999999999999997763 4444

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.77  E-value=4.2e-19  Score=144.37  Aligned_cols=115  Identities=50%  Similarity=0.841  Sum_probs=100.2

Q ss_pred             ccCCCcceecCCHHHHHHHHHHCCceEEEecCCC-chHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCcc
Q psy8911           5 DARGAHIKYYPDVPGILKYLKQNNCLVAAASRTS-EIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKD   83 (280)
Q Consensus         5 ~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~-~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~   83 (280)
                      +.+...++++||+.++|+.|+++|++++|+||++ . ..++..++.+++..+|+.+.+.+++++..|+.+++++|++|++
T Consensus        61 ~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~-~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~  139 (187)
T 2wm8_A           61 DRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEI-EGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQ  139 (187)
T ss_dssp             CTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCH-HHHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGGG
T ss_pred             hccCcccCcchhHHHHHHHHHHCCceEEEEeCCCCh-HHHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCChHH
Confidence            3446678899999999999999999999999998 6 7889999999999999943345566677799999999999999


Q ss_pred             EEEEeCCcccccccccCCCeEEEEcCCCchhhhhccc
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGR  120 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~  120 (280)
                      |+||||+..|+++|+++|+.++++.++.....+....
T Consensus       140 ~~~igD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~l  176 (187)
T 2wm8_A          140 MIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGL  176 (187)
T ss_dssp             EEEEESCHHHHHHHHTTTCEEEECSSSCCHHHHHHHH
T ss_pred             EEEEeCCccChHHHHHcCCEEEEECCCCChHHHHHHH
Confidence            9999999999999999999999999887665554443

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.77  E-value=6.3e-19  Score=146.84  Aligned_cols=100  Identities=21%  Similarity=0.325  Sum_probs=91.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++ ++++|+||+ ....++..++.+|+.++|+.+...     .+|++..|..+++++|++|++|
T Consensus        98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~-~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  175 (234)
T 3u26_A           98 YGELYPEVVEVLKSLKGK-YHVGMITDS-DTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA  175 (234)
T ss_dssp             HCCBCTTHHHHHHHHTTT-SEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred             hCCcCcCHHHHHHHHHhC-CcEEEEECC-CHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence            467899999999999999 999999999 888899999999999999976443     2477888999999999999999


Q ss_pred             EEEeCCc-CCcccccccCceEEEECCCC
Q psy8911         238 VFFDDEE-RNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       238 l~igD~~-~di~~a~~aG~~~i~v~~g~  264 (280)
                      ++|||+. +|+++|+++|+.+++|..|.
T Consensus       176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~~  203 (234)
T 3u26_A          176 VYVGDNPVKDCGGSKNLGMTSILLDRKG  203 (234)
T ss_dssp             EEEESCTTTTHHHHHTTTCEEEEECSSS
T ss_pred             EEEcCCcHHHHHHHHHcCCEEEEECCCC
Confidence            9999998 99999999999999998764

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.77  E-value=1.9e-19  Score=151.32  Aligned_cols=101  Identities=15%  Similarity=0.131  Sum_probs=88.2

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc--ccceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF--SNKEIY-----PGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f--~~~~~~-----~~~k~~~~~~~~~~~~~~~~  235 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....+...++. |+.++|  +.+...     .+|++..|..+++++|++|+
T Consensus       106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~  183 (247)
T 3dv9_A          106 KAERMPGALEVLTKIKSEGLTPMVVTGS-GQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPN  183 (247)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEECSC-C---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGG
T ss_pred             cCCCCCCHHHHHHHHHHcCCcEEEEcCC-chHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChh
Confidence            4678999999999999999999999999 77878888999 999999  765432     24788999999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|++|||+.+|+.+|+++|+.+++|.+|..
T Consensus       184 ~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~  213 (247)
T 3dv9_A          184 EALVIENAPLGVQAGVAAGIFTIAVNTGPL  213 (247)
T ss_dssp             GEEEEECSHHHHHHHHHTTSEEEEECCSSS
T ss_pred             heEEEeCCHHHHHHHHHCCCeEEEEcCCCC
Confidence            999999999999999999999999998753

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.77  E-value=1.9e-19  Score=151.57  Aligned_cols=101  Identities=16%  Similarity=0.142  Sum_probs=90.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc--ccceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF--SNKEIY-----PGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f--~~~~~~-----~~~k~~~~~~~~~~~~~~~~  235 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....+...++. ++.++|  +.+...     .+|++..|..+++++|++|+
T Consensus       107 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~  184 (243)
T 3qxg_A          107 EAERMPGAWELLQKVKSEGLTPMVVTGS-GQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKAD  184 (243)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEECCC-CCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGG
T ss_pred             cCCCCCCHHHHHHHHHHcCCcEEEEeCC-cHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHH
Confidence            4678999999999999999999999999 77778888888 999999  765332     24788999999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|++|||+.+|+.+|+++|+.+++|.+|..
T Consensus       185 ~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~  214 (243)
T 3qxg_A          185 EAVVIENAPLGVEAGHKAGIFTIAVNTGPL  214 (243)
T ss_dssp             GEEEEECSHHHHHHHHHTTCEEEEECCSSS
T ss_pred             HeEEEeCCHHHHHHHHHCCCEEEEEeCCCC
Confidence            999999999999999999999999998753

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.77  E-value=4.1e-19  Score=140.91  Aligned_cols=119  Identities=12%  Similarity=0.075  Sum_probs=96.9

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      +.+++.||+||||++......            ........+.|++.++|+.|+++|++++|+||+ ....++..++++|
T Consensus         8 ~~k~v~~DlDGTL~~~~~~~~------------~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~-~~~~~~~~l~~~g   74 (162)
T 2p9j_A            8 KLKLLIMDIDGVLTDGKLYYT------------EHGETIKVFNVLDGIGIKLLQKMGITLAVISGR-DSAPLITRLKELG   74 (162)
T ss_dssp             HCCEEEECCTTTTSCSEEEEE------------TTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESC-CCHHHHHHHHHTT
T ss_pred             ceeEEEEecCcceECCceeec------------CCCceeeeecccHHHHHHHHHHCCCEEEEEeCC-CcHHHHHHHHHcC
Confidence            468999999999997432110            000011234577899999999999999999999 8888999999999


Q ss_pred             CccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911         205 LNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       205 l~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      +..+|+.    ..|++..|..++++++++|++++||||+.+|+.+|+++|+.++..
T Consensus        75 l~~~~~~----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~  126 (162)
T 2p9j_A           75 VEEIYTG----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR  126 (162)
T ss_dssp             CCEEEEC----C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred             CHhhccC----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec
Confidence            9999875    468999999999999999999999999999999999999996643

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.77  E-value=4.3e-19  Score=150.55  Aligned_cols=97  Identities=12%  Similarity=0.151  Sum_probs=88.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+  |++++|+||+ ....++..++++|+..+|+.+...     .+|++..|..+++++|++|++|
T Consensus        91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~-~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~  167 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELA--PLKRAILSNG-APDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEV  167 (253)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred             cCCCCccHHHHHHHHc--CCCEEEEeCc-CHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence            3578999999999999  8999999999 888899999999999999976443     2477889999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +||||+.+|+++|+++|+.++++++
T Consensus       168 ~~vGD~~~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          168 LFVSSNGFDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             EEEESCHHHHHHHHHHTCEEEEECC
T ss_pred             EEEeCChhhHHHHHHCCCEEEEECC
Confidence            9999999999999999999999986

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.77  E-value=1.1e-19  Score=149.55  Aligned_cols=102  Identities=16%  Similarity=0.186  Sum_probs=91.2

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh------CCCccccccceEe-----cCCCHHHHHHHHHHcC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL------INLNQYFSNKEIY-----PGPKTTHFESLKKATG  231 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~------~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~  231 (280)
                      ...++||+.++|+.|++ |++++|+||+ ....++..++.      +|+..+|+.+...     .+|+++.|..+++++|
T Consensus        87 ~~~~~~~~~~~l~~l~~-g~~~~i~t~~-~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~  164 (211)
T 2i6x_A           87 LEEISAEKFDYIDSLRP-DYRLFLLSNT-NPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSG  164 (211)
T ss_dssp             EEEECHHHHHHHHHHTT-TSEEEEEECC-CHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHC
T ss_pred             hcccChHHHHHHHHHHc-CCeEEEEeCC-CHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhC
Confidence            35789999999999999 9999999999 88888889998      8999999976442     2477889999999999


Q ss_pred             CCCCcEEEEeCCcCCcccccccCceEEEECCCCCH
Q psy8911         232 IEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       232 ~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      ++|++|+||||+.+|+.+|+++|+.+++++++...
T Consensus       165 ~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~  199 (211)
T 2i6x_A          165 MKPEETLFIDDGPANVATAERLGFHTYCPDNGENW  199 (211)
T ss_dssp             CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCC
T ss_pred             CChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHH
Confidence            99999999999999999999999999999877543

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.77  E-value=5.7e-19  Score=147.39  Aligned_cols=101  Identities=15%  Similarity=0.138  Sum_probs=91.5

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++||+.++|+.|+ +|++++|+||+ ....++..++.+|+.++|+.+....     +|++..|..+++++|++|++
T Consensus       104 ~~~~~~~~~~~~l~~l~-~g~~~~i~sn~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~  181 (240)
T 3qnm_A          104 TKSGLMPHAKEVLEYLA-PQYNLYILSNG-FRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRE  181 (240)
T ss_dssp             GCCCBSTTHHHHHHHHT-TTSEEEEEECS-CHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGG
T ss_pred             hcCCcCccHHHHHHHHH-cCCeEEEEeCC-chHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCccc
Confidence            34678999999999999 99999999999 8888899999999999999765432     47889999999999999999


Q ss_pred             EEEEeCCc-CCcccccccCceEEEECCCC
Q psy8911         237 MVFFDDEE-RNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       237 ~l~igD~~-~di~~a~~aG~~~i~v~~g~  264 (280)
                      |++|||++ +|+++|+++|+.++++..+.
T Consensus       182 ~~~iGD~~~~Di~~a~~aG~~~~~~~~~~  210 (240)
T 3qnm_A          182 SLMIGDSWEADITGAHGVGMHQAFYNVTE  210 (240)
T ss_dssp             EEEEESCTTTTHHHHHHTTCEEEEECCSC
T ss_pred             EEEECCCchHhHHHHHHcCCeEEEEcCCC
Confidence            99999996 99999999999999998765

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.77  E-value=2.1e-19  Score=150.64  Aligned_cols=99  Identities=14%  Similarity=0.138  Sum_probs=87.5

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFD  241 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~ig  241 (280)
                      ....++||+.++|+.|+++| +++|+||+ ....++..++++|+.+||+.......+|+..+..+++  +++|++|+|||
T Consensus        93 ~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~-~~~~~~~~l~~~gl~~~f~~~~~~~~~K~~~~~~~~~--~~~~~~~~~vg  168 (231)
T 2p11_A           93 FASRVYPGALNALRHLGARG-PTVILSDG-DVVFQPRKIARSGLWDEVEGRVLIYIHKELMLDQVME--CYPARHYVMVD  168 (231)
T ss_dssp             GGGGBCTTHHHHHHHHHTTS-CEEEEEEC-CSSHHHHHHHHTTHHHHTTTCEEEESSGGGCHHHHHH--HSCCSEEEEEC
T ss_pred             HhCCcCccHHHHHHHHHhCC-CEEEEeCC-CHHHHHHHHHHcCcHHhcCeeEEecCChHHHHHHHHh--cCCCceEEEEc
Confidence            45689999999999999999 99999999 8888999999999999998765544567666776666  79999999999


Q ss_pred             CCcC---CcccccccCceEEEECCCC
Q psy8911         242 DEER---NSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       242 D~~~---di~~a~~aG~~~i~v~~g~  264 (280)
                      |+.+   |+.+|+++||++++|.+|.
T Consensus       169 Ds~~d~~di~~A~~aG~~~i~v~~g~  194 (231)
T 2p11_A          169 DKLRILAAMKKAWGARLTTVFPRQGH  194 (231)
T ss_dssp             SCHHHHHHHHHHHGGGEEEEEECCSS
T ss_pred             CccchhhhhHHHHHcCCeEEEeCCCC
Confidence            9999   9999999999999999874

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.77  E-value=4.6e-19  Score=146.29  Aligned_cols=96  Identities=19%  Similarity=0.228  Sum_probs=86.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceE---------------ecCCCHHHHHHHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---------------YPGPKTTHFESLK  227 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~---------------~~~~k~~~~~~~~  227 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+..               ...||+..|+.++
T Consensus        73 ~~~~~~~~~~~l~~l~~~g~~~~i~S~~-~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~  151 (217)
T 3m1y_A           73 SLPLFEGALELVSALKEKNYKVVCFSGG-FDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ  151 (217)
T ss_dssp             TCCBCBTHHHHHHHHHTTTEEEEEEEEE-EHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred             cCcCCCCHHHHHHHHHHCCCEEEEEcCC-chhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence            3679999999999999999999999999 89999999999999999986431               1246778899999


Q ss_pred             HHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         228 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       228 ~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      +++|++|++|+||||+.+|+.+|+++|+.++.
T Consensus       152 ~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~  183 (217)
T 3m1y_A          152 RLLNISKTNTLVVGDGANDLSMFKHAHIKIAF  183 (217)
T ss_dssp             HHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred             HHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence            99999999999999999999999999999876

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.76  E-value=6.1e-19  Score=145.80  Aligned_cols=100  Identities=20%  Similarity=0.338  Sum_probs=89.5

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~   82 (280)
                      ..+++||+.++|+.|+++|++++++||++. ..++..++.+++.+|||  .+++++       ++..|+.+++++|++|+
T Consensus        82 ~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~-~~~~~~l~~~~l~~~fd--~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~  158 (216)
T 3kbb_A           82 LLKENPGVREALEFVKSKRIKLALATSTPQ-REALERLRRLDLEKYFD--VMVFGDQVKNGKPDPEIYLLVLERLNVVPE  158 (216)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCS--EEECGGGSSSCTTSTHHHHHHHHHHTCCGG
T ss_pred             hcccCccHHHHHHHHHHcCCCcccccCCcH-HHHHHHHHhcCCCcccc--ccccccccCCCcccHHHHHHHHHhhCCCcc
Confidence            457899999999999999999999999999 89999999999999999  666543       33459999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEE-EcCCCc
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCIL-VEDGMT  112 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~-v~~~~~  112 (280)
                      +|+||||+..|+++|+++||++|+ ++++..
T Consensus       159 e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~  189 (216)
T 3kbb_A          159 KVVVFEDSKSGVEAAKSAGIERIYGVVHSLN  189 (216)
T ss_dssp             GEEEEECSHHHHHHHHHTTCCCEEEECCSSS
T ss_pred             ceEEEecCHHHHHHHHHcCCcEEEEecCCCC
Confidence            999999999999999999999986 666643

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.76  E-value=1.3e-18  Score=145.10  Aligned_cols=99  Identities=9%  Similarity=0.068  Sum_probs=90.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcC-CCCCc
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATG-IEYKD  236 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~-~~~~~  236 (280)
                      ...++||+.++|+.|+++ ++++|+||+ ....++..++.+|+.++|+.+....     +|++..|..+++++| ++|++
T Consensus       101 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~  178 (238)
T 3ed5_A          101 GHQLIDGAFDLISNLQQQ-FDLYIVTNG-VSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEH  178 (238)
T ss_dssp             CCCBCTTHHHHHHHHHTT-SEEEEEECS-CHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGG
T ss_pred             cCCCCccHHHHHHHHHhc-CeEEEEeCC-CHHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhH
Confidence            467899999999999999 999999999 8888899999999999999764432     478899999999999 99999


Q ss_pred             EEEEeCCc-CCcccccccCceEEEECCC
Q psy8911         237 MVFFDDEE-RNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       237 ~l~igD~~-~di~~a~~aG~~~i~v~~g  263 (280)
                      |++|||+. +|+++|+++|+.++++.+|
T Consensus       179 ~i~vGD~~~~Di~~a~~aG~~~i~~~~~  206 (238)
T 3ed5_A          179 TLIIGDSLTADIKGGQLAGLDTCWMNPD  206 (238)
T ss_dssp             EEEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred             eEEECCCcHHHHHHHHHCCCEEEEECCC
Confidence            99999998 9999999999999999876

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.76  E-value=5.5e-19  Score=150.95  Aligned_cols=101  Identities=11%  Similarity=-0.016  Sum_probs=91.5

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccc-cccceEe-----cCCCHHHHHHHHHHcCCCC-Cc
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-FSNKEIY-----PGPKTTHFESLKKATGIEY-KD  236 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~-f~~~~~~-----~~~k~~~~~~~~~~~~~~~-~~  236 (280)
                      ..++||+.++|+.|+++|++++|+||+ ....++..++.+++.++ |+.+...     .+|++..|..+++++|++| ++
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  188 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGY-GPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNG  188 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGG
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCC-chHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCcc
Confidence            578999999999999999999999999 88888999999999988 7764332     2478899999999999999 99


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |+||||+.+|+++|+++|+.+++|.+|..
T Consensus       189 ~i~vGD~~~Di~~a~~aG~~~v~v~~g~~  217 (277)
T 3iru_A          189 CIKVDDTLPGIEEGLRAGMWTVGVSCSGN  217 (277)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEEECSSST
T ss_pred             EEEEcCCHHHHHHHHHCCCeEEEEecCCc
Confidence            99999999999999999999999998854

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.75  E-value=2.1e-19  Score=151.96  Aligned_cols=102  Identities=14%  Similarity=0.133  Sum_probs=89.2

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh-CCCccccccceEec-------CCCHHHHHHHHHHcCCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNKEIYP-------GPKTTHFESLKKATGIEY  234 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~-~gl~~~f~~~~~~~-------~~k~~~~~~~~~~~~~~~  234 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....+...+.. +|+.++|+.+....       +|+++.|..+++++|++|
T Consensus       110 ~~~~~~~~~~~l~~l~~~g~~~~i~sn~-~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~  188 (250)
T 3l5k_A          110 TAALMPGAEKLIIHLRKHGIPFALATSS-RSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPP  188 (250)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCCEEEECSC-CHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCC
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCC-CHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCC
Confidence            4679999999999999999999999999 77777766654 68999998754333       377789999999999998


Q ss_pred             --CcEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         235 --KDMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       235 --~~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                        ++|++|||+.+|+++|+++|+.+++|.+|..
T Consensus       189 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~  221 (250)
T 3l5k_A          189 AMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNL  221 (250)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEECCCTTS
T ss_pred             CcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCC
Confidence              9999999999999999999999999988764

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.75  E-value=2.8e-19  Score=151.98  Aligned_cols=101  Identities=18%  Similarity=0.106  Sum_probs=92.0

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc-ceE------ecCCCHHHHHHHHHHcCCCC
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-KEI------YPGPKTTHFESLKKATGIEY  234 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~-~~~------~~~~k~~~~~~~~~~~~~~~  234 (280)
                      ....++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+. +..      ..+|++..|..+++++|++|
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~  185 (259)
T 4eek_A          107 TGVTAIEGAAETLRALRAAGVPFAIGSNS-ERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILP  185 (259)
T ss_dssp             TTCEECTTHHHHHHHHHHHTCCEEEECSS-CHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCG
T ss_pred             ccCCcCccHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCH
Confidence            45678999999999999999999999999 88889999999999999987 432      23477899999999999999


Q ss_pred             CcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         235 KDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       235 ~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      ++|++|||+.+|+++|+++|+.+++|.+|
T Consensus       186 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~g  214 (259)
T 4eek_A          186 ERCVVIEDSVTGGAAGLAAGATLWGLLVP  214 (259)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEECCT
T ss_pred             HHEEEEcCCHHHHHHHHHCCCEEEEEccC
Confidence            99999999999999999999999999876

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.75  E-value=4e-19  Score=148.27  Aligned_cols=96  Identities=19%  Similarity=0.231  Sum_probs=82.8

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcEEE
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDMVF  239 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~l~  239 (280)
                      .++||+.++|+.|+++|++++|+||+ ..  +...++.+|+.++|+.+...     .+|++..|..+++++|++|++|++
T Consensus        92 ~~~~~~~~~l~~l~~~g~~~~i~t~~-~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~  168 (233)
T 3nas_A           92 DLLPGIGRLLCQLKNENIKIGLASSS-RN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAA  168 (233)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECCSC-TT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEE
T ss_pred             CcCcCHHHHHHHHHHCCCcEEEEcCc-hh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEE
Confidence            47999999999999999999999998 54  77889999999999975332     247778999999999999999999


Q ss_pred             EeCCcCCcccccccCceEEEECCC
Q psy8911         240 FDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       240 igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      |||+.+|+.+|+++|+.+++++..
T Consensus       169 vGDs~~Di~~a~~aG~~~~~~~~~  192 (233)
T 3nas_A          169 IEDAEAGISAIKSAGMFAVGVGQG  192 (233)
T ss_dssp             EECSHHHHHHHHHTTCEEEECC--
T ss_pred             EeCCHHHHHHHHHcCCEEEEECCc
Confidence            999999999999999999999653

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.75  E-value=1.8e-18  Score=142.81  Aligned_cols=99  Identities=11%  Similarity=0.243  Sum_probs=89.1

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC---C--hhHHHHHHHHhCCCCccE
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ---K--TTHFANLKKATGIEYKDM   84 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~---~--~~~~~~~~~~~g~~p~~~   84 (280)
                      .+.++||+.++|+.|++ |++++|+||++. ..++..++.+|+.+||+  .+++++   +  +..|+.+++++|++|++|
T Consensus        82 ~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~-~~~~~~l~~~gl~~~f~--~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~  157 (210)
T 2ah5_A           82 EAQLFPQIIDLLEELSS-SYPLYITTTKDT-STAQDMAKNLEIHHFFD--GIYGSSPEAPHKADVIHQALQTHQLAPEQA  157 (210)
T ss_dssp             SCEECTTHHHHHHHHHT-TSCEEEEEEEEH-HHHHHHHHHTTCGGGCS--EEEEECSSCCSHHHHHHHHHHHTTCCGGGE
T ss_pred             CCCCCCCHHHHHHHHHc-CCeEEEEeCCCH-HHHHHHHHhcCchhhee--eeecCCCCCCCChHHHHHHHHHcCCCcccE
Confidence            46899999999999999 999999999999 88999999999999999  666543   2  334999999999999999


Q ss_pred             EEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          85 VFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        85 l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|||+.+|+++|+++|++++++.++..
T Consensus       158 ~~vgDs~~Di~~a~~aG~~~i~v~~~~~  185 (210)
T 2ah5_A          158 IIIGDTKFDMLGARETGIQKLAITWGFG  185 (210)
T ss_dssp             EEEESSHHHHHHHHHHTCEEEEESSSSS
T ss_pred             EEECCCHHHHHHHHHCCCcEEEEcCCCC
Confidence            9999999999999999999999987654

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.74  E-value=4.8e-18  Score=141.36  Aligned_cols=98  Identities=17%  Similarity=0.191  Sum_probs=84.5

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc--cccccce--------Eec---------CCCHHHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNKE--------IYP---------GPKTTHF  223 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~--~~f~~~~--------~~~---------~~k~~~~  223 (280)
                      ..+++||+.++|+.|+++|++++|+||+ ....++..++++|+.  ++|+.+.        .+.         .+||..|
T Consensus        84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~-~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~  162 (225)
T 1nnl_A           84 PPHLTPGIRELVSRLQERNVQVFLISGG-FRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI  162 (225)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred             cCCCCccHHHHHHHHHHCCCcEEEEeCC-hHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence            3679999999999999999999999999 899999999999998  4776532        111         2577889


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         224 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       224 ~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      ..+++++|+  ++|+||||+.+|+.+|+++|+ ++++..+.
T Consensus       163 ~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~  200 (225)
T 1nnl_A          163 KLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNV  200 (225)
T ss_dssp             HHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSC
T ss_pred             HHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCcc
Confidence            999999998  799999999999999999999 88886543

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.74  E-value=4.1e-19  Score=156.35  Aligned_cols=97  Identities=15%  Similarity=0.128  Sum_probs=87.1

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceE---------------ecCCCHHHHHHH
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---------------YPGPKTTHFESL  226 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~---------------~~~~k~~~~~~~  226 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....++..++.+|+..+|+....               ..+||++.|..+
T Consensus       176 ~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~-~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~  254 (317)
T 4eze_A          176 DRMTLSPGLLTILPVIKAKGFKTAIISGG-LDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDL  254 (317)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred             hCCEECcCHHHHHHHHHhCCCEEEEEeCc-cHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHH
Confidence            34679999999999999999999999999 99999999999999999985422               113677889999


Q ss_pred             HHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         227 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       227 ~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      ++++|++|++|+||||+.+|+.+|+++|+.+++
T Consensus       255 ~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          255 AARLNIATENIIACGDGANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999999997776

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.74  E-value=3.4e-18  Score=135.82  Aligned_cols=117  Identities=10%  Similarity=0.103  Sum_probs=93.9

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceec-cCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      +.++++||+||||++......             .....+. ....-..+|+.|+++|++++|+||+ ....++..++++
T Consensus         3 ~ik~vifD~DGTL~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~-~~~~~~~~~~~~   68 (164)
T 3e8m_A            3 EIKLILTDIDGVWTDGGMFYD-------------QTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGE-KTEIVRRRAEKL   68 (164)
T ss_dssp             CCCEEEECSTTTTSSSEEEEC-------------SSSCEEEEEEGGGHHHHHHHHHTTCCEEEECSS-CCHHHHHHHHHT
T ss_pred             cceEEEEcCCCceEcCcEEEc-------------CCCcEEEEecCChHHHHHHHHHCCCEEEEEeCC-ChHHHHHHHHHc
Confidence            357899999999998532211             0011110 1111123799999999999999999 888999999999


Q ss_pred             CCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         204 NLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       204 gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      |+..+|+..    +||+..+..++++++++|++|+||||+.+|+.+|+++|+.++.
T Consensus        69 gl~~~~~~~----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~  120 (164)
T 3e8m_A           69 KVDYLFQGV----VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP  120 (164)
T ss_dssp             TCSEEECSC----SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC
T ss_pred             CCCEeeccc----CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc
Confidence            999999863    7899999999999999999999999999999999999998765

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.74  E-value=8e-19  Score=144.24  Aligned_cols=102  Identities=10%  Similarity=0.111  Sum_probs=91.4

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++||+.++|+.|+++ ++++|+||+ ....++..++.+|+.++|+.+....     +|++..|..+++++|++|++
T Consensus        80 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~  157 (209)
T 2hdo_A           80 DQIELYPGITSLFEQLPSE-LRLGIVTSQ-RRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQN  157 (209)
T ss_dssp             GGCEECTTHHHHHHHSCTT-SEEEEECSS-CHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGG
T ss_pred             ccCCcCCCHHHHHHHHHhc-CcEEEEeCC-CHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCccc
Confidence            4567899999999999999 999999999 8888999999999999998754332     35689999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |++|||+.+|+.+|+++|+.++.+++|..
T Consensus       158 ~i~vGD~~~Di~~a~~aG~~~~~~~~~~~  186 (209)
T 2hdo_A          158 ALFIGDSVSDEQTAQAANVDFGLAVWGMD  186 (209)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEEEGGGCC
T ss_pred             EEEECCChhhHHHHHHcCCeEEEEcCCCC
Confidence            99999999999999999999999986653

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.74  E-value=1.6e-18  Score=149.46  Aligned_cols=102  Identities=23%  Similarity=0.323  Sum_probs=91.3

Q ss_pred             eeccCCCHHHHHHHHhhCCc--EEEEEcCCCcHHHHHHHHhhCCCccccccceEe---------cCCCHHHHHHHHHHcC
Q psy8911         163 LIKYYRGVPEILRYLKENKC--LVAAASRTSEILHAKQILNLINLNQYFSNKEIY---------PGPKTTHFESLKKATG  231 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~--~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~---------~~~k~~~~~~~~~~~~  231 (280)
                      .+.++||+.++|+.|+++|+  +++|+||+ ....++..++.+|+.++|+.+...         .+|++..|..+++++|
T Consensus       140 ~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~-~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lg  218 (282)
T 3nuq_A          140 ILKPDIPLRNMLLRLRQSGKIDKLWLFTNA-YKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESG  218 (282)
T ss_dssp             TCCCCHHHHHHHHHHHHSSSCSEEEEECSS-CHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHT
T ss_pred             ccCcChhHHHHHHHHHhCCCCceEEEEECC-ChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcC
Confidence            46789999999999999999  99999999 888899999999999999975422         2578899999999999


Q ss_pred             CCC-CcEEEEeCCcCCcccccccCc-eEEEECCCCC
Q psy8911         232 IEY-KDMVFFDDEERNSHDVSPLGV-TCIHVKKGMS  265 (280)
Q Consensus       232 ~~~-~~~l~igD~~~di~~a~~aG~-~~i~v~~g~~  265 (280)
                      ++| ++|+||||+.+|+.+|+++|+ .++++..+..
T Consensus       219 i~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~  254 (282)
T 3nuq_A          219 LARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEV  254 (282)
T ss_dssp             CCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC
T ss_pred             CCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCcc
Confidence            999 999999999999999999999 7888876643

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.73  E-value=3.5e-18  Score=144.56  Aligned_cols=98  Identities=15%  Similarity=0.239  Sum_probs=87.3

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~   82 (280)
                      ...++||+.++|+.|+++|++++++||+..   .+..++.+++.++||  .+++++       ++..|+.+++++|++|+
T Consensus        93 ~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~---~~~~l~~~gl~~~fd--~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~  167 (243)
T 4g9b_A           93 VNAVLPGIRSLLADLRAQQISVGLASVSLN---APTILAALELREFFT--FCADASQLKNSKPDPEIFLAACAGLGVPPQ  167 (243)
T ss_dssp             GGGBCTTHHHHHHHHHHTTCEEEECCCCTT---HHHHHHHTTCGGGCS--EECCGGGCSSCTTSTHHHHHHHHHHTSCGG
T ss_pred             cccccccHHHHHHhhhcccccceecccccc---hhhhhhhhhhccccc--cccccccccCCCCcHHHHHHHHHHcCCChH
Confidence            456899999999999999999999999876   577899999999999  666543       23449999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|+||||+..|+++|+++||++|+|+++..
T Consensus       168 e~l~VgDs~~di~aA~~aG~~~I~V~~g~~  197 (243)
T 4g9b_A          168 ACIGIEDAQAGIDAINASGMRSVGIGAGLT  197 (243)
T ss_dssp             GEEEEESSHHHHHHHHHHTCEEEEESTTCC
T ss_pred             HEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence            999999999999999999999999987754

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.73  E-value=3.9e-19  Score=148.50  Aligned_cols=100  Identities=24%  Similarity=0.355  Sum_probs=87.9

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHH------hhCCCccccccceEe-----cCCCHHHHHHHHHHcCCC
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL------NLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIE  233 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l------~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~  233 (280)
                      .++||+.++|+.|+++ ++++|+||+ ....++..+      +.+|+.++|+.+...     .+|++..|+.+++++|++
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~-~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~  189 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNT-NDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGID  189 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECC-CHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECC-ChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCC
Confidence            4679999999999999 999999999 788777444      888999999976443     247789999999999999


Q ss_pred             CCcEEEEeCCcCCcccccccCceEEEECCCCCH
Q psy8911         234 YKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       234 ~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      |++|+||||+.+|+++|+++|+.+++++.+...
T Consensus       190 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~  222 (229)
T 4dcc_A          190 PKETFFIDDSEINCKVAQELGISTYTPKAGEDW  222 (229)
T ss_dssp             GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCG
T ss_pred             HHHeEEECCCHHHHHHHHHcCCEEEEECCHHHH
Confidence            999999999999999999999999999877554

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.73  E-value=6.5e-19  Score=144.12  Aligned_cols=95  Identities=21%  Similarity=0.226  Sum_probs=86.6

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcEE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      ..++||+.+ |+.|+++ ++++|+||+ ....++..++++|+.++|+.+...     .+|+++.|..+++++|  |++|+
T Consensus        73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~  147 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEI-AEVYALSNG-SINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF  147 (201)
T ss_dssp             CEECGGGGG-HHHHHHH-SEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred             cccCCChHH-HHHHHhC-CeEEEEeCc-CHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence            578999999 9999999 999999999 888889999999999999975443     2477899999999999  99999


Q ss_pred             EEeCCcCCcccccccCceEEEECCC
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      ||||+.+|+++|+++|+.++++.++
T Consensus       148 ~vGD~~~Di~~a~~aG~~~~~~~~~  172 (201)
T 2w43_A          148 LVSSNAFDVIGAKNAGMRSIFVNRK  172 (201)
T ss_dssp             EEESCHHHHHHHHHTTCEEEEECSS
T ss_pred             EEeCCHHHhHHHHHCCCEEEEECCC
Confidence            9999999999999999999999864

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.73  E-value=2.4e-18  Score=142.74  Aligned_cols=118  Identities=10%  Similarity=0.061  Sum_probs=94.7

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      ..++++||+||||+|+......      .....    ....+.++.  +|+.|+++|++++|+||+ ....++..++++|
T Consensus        48 ~ik~viFDlDGTL~Ds~~~~~~------~~~~~----~~~~~~d~~--~L~~L~~~G~~l~I~T~~-~~~~~~~~l~~lg  114 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLIYMGN------QGEEL----KAFNVRDGY--GIRCLITSDIDVAIITGR-RAKLLEDRANTLG  114 (211)
T ss_dssp             TCSEEEECCTTTTSSSEEEEET------TSCEE----EEEEHHHHH--HHHHHHHTTCEEEEECSS-CCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCEECCHHHHhh------hhHHH----HHhccchHH--HHHHHHHCCCEEEEEeCC-CHHHHHHHHHHcC
Confidence            4579999999999997422110      00000    011111222  899999999999999999 8889999999999


Q ss_pred             CccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         205 LNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       205 l~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      +..+|+..    .||++.++.+++++|++|++|+||||+.+|+.+++++|+.++.
T Consensus       115 i~~~f~~~----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~  165 (211)
T 3ij5_A          115 ITHLYQGQ----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAV  165 (211)
T ss_dssp             CCEEECSC----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred             Cchhhccc----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEe
Confidence            99999864    7889999999999999999999999999999999999998664

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.73  E-value=2.3e-18  Score=140.42  Aligned_cols=118  Identities=10%  Similarity=0.105  Sum_probs=93.9

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      ..++++||+||||+|+......      ......    ...+.++.  +|+.|+++|++++|+||+ ....++..++++|
T Consensus        18 ~ik~vifD~DGTL~d~~~~~~~------~~~~~~----~~~~~~~~--~l~~L~~~g~~~~i~T~~-~~~~~~~~~~~lg   84 (189)
T 3mn1_A           18 AIKLAVFDVDGVLTDGRLYFME------DGSEIK----TFNTLDGQ--GIKMLIASGVTTAIISGR-KTAIVERRAKSLG   84 (189)
T ss_dssp             TCCEEEECSTTTTSCSEEEEET------TSCEEE----EEEHHHHH--HHHHHHHTTCEEEEECSS-CCHHHHHHHHHHT
T ss_pred             hCCEEEEcCCCCcCCccEeecc------CCcEee----eeccccHH--HHHHHHHCCCEEEEEECc-ChHHHHHHHHHcC
Confidence            4589999999999986332110      000000    01111112  899999999999999999 8889999999999


Q ss_pred             CccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         205 LNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       205 l~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      +.++|+..    .+|++.+..+++++|++|++|+||||+.+|+.+++++|+.++.
T Consensus        85 l~~~f~~~----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~  135 (189)
T 3mn1_A           85 IEHLFQGR----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAV  135 (189)
T ss_dssp             CSEEECSC----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             CHHHhcCc----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEe
Confidence            99999864    6888999999999999999999999999999999999997653

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.73  E-value=4.9e-18  Score=141.16  Aligned_cols=95  Identities=13%  Similarity=0.182  Sum_probs=84.6

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+++ ++++|+||+ ...     ++.+|+.++|+.+....     +|++..|..+++++|++|++|
T Consensus       103 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~-~~~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  175 (230)
T 3vay_A          103 QVQIFPEVQPTLEILAKT-FTLGVITNG-NAD-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAA  175 (230)
T ss_dssp             CCCBCTTHHHHHHHHHTT-SEEEEEESS-CCC-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred             cCccCcCHHHHHHHHHhC-CeEEEEECC-chh-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchhe
Confidence            457999999999999999 999999999 433     88999999999764432     588899999999999999999


Q ss_pred             EEEeCCc-CCcccccccCceEEEECCCC
Q psy8911         238 VFFDDEE-RNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       238 l~igD~~-~di~~a~~aG~~~i~v~~g~  264 (280)
                      +||||+. +|+.+|+++|+.+++|.+|.
T Consensus       176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~~  203 (230)
T 3vay_A          176 VHVGDHPSDDIAGAQQAGMRAIWYNPQG  203 (230)
T ss_dssp             EEEESCTTTTHHHHHHTTCEEEEECTTC
T ss_pred             EEEeCChHHHHHHHHHCCCEEEEEcCCC
Confidence            9999998 99999999999999998654

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.73  E-value=3.6e-19  Score=145.71  Aligned_cols=102  Identities=25%  Similarity=0.306  Sum_probs=88.9

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh-CCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL-INLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~-~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ..++||+.++|+.|+++|++++|+||+ ....++..+++ +|+.++|+.+...     .+|+++.|..+++++|++|++|
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~  168 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNT-NRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT  168 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECC-CCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECC-ChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence            678999999999999999999999999 66666666666 7888999875443     2477789999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCCCH
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      +||||+.+|+.+|+++|+.++++.++...
T Consensus       169 ~~vgD~~~Di~~a~~aG~~~~~~~~~~~~  197 (206)
T 2b0c_A          169 VFFDDNADNIEGANQLGITSILVKDKTTI  197 (206)
T ss_dssp             EEEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred             EEeCCCHHHHHHHHHcCCeEEEecCCchH
Confidence            99999999999999999999999887543

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.72  E-value=8.1e-18  Score=136.05  Aligned_cols=119  Identities=15%  Similarity=0.136  Sum_probs=98.2

Q ss_pred             ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCce-eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911         124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTL-IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      .+.+++.||+||||++.....             ...+.. -.+.+...++|+.|+++|++++|+||+ ....+...+++
T Consensus         6 ~~ik~i~~DlDGTL~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~-~~~~~~~~~~~   71 (180)
T 1k1e_A            6 ENIKFVITDVDGVLTDGQLHY-------------DANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGR-DSPILRRRIAD   71 (180)
T ss_dssp             GGCCEEEEECTTTTSCSEEEE-------------ETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESC-CCHHHHHHHHH
T ss_pred             hCCeEEEEeCCCCcCCCCeee-------------ccCcceeeeeccchHHHHHHHHHCCCeEEEEeCC-CcHHHHHHHHH
Confidence            346899999999999743211             011111 124467789999999999999999999 88889999999


Q ss_pred             CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911         203 INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       203 ~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      +|+..+|+.    ..||+..+..++++++++|++++||||+.+|+.+++++|+.++..
T Consensus        72 lgl~~~~~~----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~  125 (180)
T 1k1e_A           72 LGIKLFFLG----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA  125 (180)
T ss_dssp             HTCCEEEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred             cCCceeecC----CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC
Confidence            999998864    468899999999999999999999999999999999999997753

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.72  E-value=1.4e-17  Score=140.17  Aligned_cols=101  Identities=14%  Similarity=0.152  Sum_probs=92.2

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....++..++++|+. +|+.+...+     +|+++.|..+++++|++|++
T Consensus       107 ~~~~~~~g~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~  184 (240)
T 2hi0_A          107 IKTGPFPGILDLMKNLRQKGVKLAVVSNK-PNEAVQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDK  184 (240)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGG
T ss_pred             hcCCcCCCHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            35678999999999999999999999999 888889999999999 999765442     37889999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      |++|||+.+|+++|+++|+.+++|.+|.
T Consensus       185 ~~~vGDs~~Di~~a~~aG~~~v~v~~~~  212 (240)
T 2hi0_A          185 CVYIGDSEIDIQTARNSEMDEIAVNWGF  212 (240)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEEESSSS
T ss_pred             eEEEcCCHHHHHHHHHCCCeEEEECCCC
Confidence            9999999999999999999999999876

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.72  E-value=2.4e-17  Score=134.19  Aligned_cols=101  Identities=20%  Similarity=0.251  Sum_probs=88.6

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCc--hHHHHHHHhhcCccccccccceecCCC-----------hhHHHHHHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSE--IQGAQQLLDLFNWNQYFDHKQIFPGQK-----------TTHFANLKK   75 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--~~~~~~~l~~~~l~~~fd~~~i~~~~~-----------~~~~~~~~~   75 (280)
                      ..++++||+.++|+.|+++|++++|+||++.  ...++..++.+|+..+|+  .++++++           ...|+.+++
T Consensus        31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~~~~~~~KP~p~~~~~~~~  108 (189)
T 3ib6_A           31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD--FIYASNSELQPGKMEKPDKTIFDFTLN  108 (189)
T ss_dssp             TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEE--EEEECCTTSSTTCCCTTSHHHHHHHHH
T ss_pred             CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheE--EEEEccccccccCCCCcCHHHHHHHHH
Confidence            3479999999999999999999999999874  146788999999999999  6666542           234999999


Q ss_pred             HhCCCCccEEEEeCC-cccccccccCCCeEEEEcCCC
Q psy8911          76 ATGIEYKDMVFFDDE-ERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        76 ~~g~~p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ++|++|++|+||||+ ..|+.+|+++||.++++.++.
T Consensus       109 ~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~  145 (189)
T 3ib6_A          109 ALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPE  145 (189)
T ss_dssp             HHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTT
T ss_pred             HcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCcc
Confidence            999999999999999 799999999999999997654

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.71  E-value=4.9e-17  Score=133.23  Aligned_cols=117  Identities=7%  Similarity=0.012  Sum_probs=95.4

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCcee-ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLI-KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      ..++++||+||||++......             .....+ .+.+.....|+.|+++|++++|+||+ ....++..++++
T Consensus        24 ~ik~vifD~DGtL~d~~~~~~-------------~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~-~~~~~~~~l~~l   89 (195)
T 3n07_A           24 QIKLLICDVDGVFSDGLIYMG-------------NQGEELKTFHTRDGYGVKALMNAGIEIAIITGR-RSQIVENRMKAL   89 (195)
T ss_dssp             TCCEEEECSTTTTSCSCCEEC-------------TTSCEECCCCTTHHHHHHHHHHTTCEEEEECSS-CCHHHHHHHHHT
T ss_pred             CCCEEEEcCCCCcCCCcEEEc-------------cCchhhheeecccHHHHHHHHHCCCEEEEEECc-CHHHHHHHHHHc
Confidence            457999999999998432211             111111 22244455699999999999999999 888999999999


Q ss_pred             CCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         204 NLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       204 gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      |+.++|+..    +||+..+..++++++++|++|+||||+.+|+.+++++|+.++.
T Consensus        90 gi~~~~~~~----k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~  141 (195)
T 3n07_A           90 GISLIYQGQ----DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV  141 (195)
T ss_dssp             TCCEEECSC----SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC
T ss_pred             CCcEEeeCC----CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE
Confidence            999999853    7889999999999999999999999999999999999988653

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.71  E-value=1.3e-17  Score=139.02  Aligned_cols=97  Identities=18%  Similarity=0.191  Sum_probs=84.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHH---HHHcCCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESL---KKATGIEY  234 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~---~~~~~~~~  234 (280)
                      .+.++||+.++|+.|++ |++++|+||+ ....+...++.  +..+|+.+.+..     +|++..|..+   ++++|++|
T Consensus        97 ~~~~~~~~~~~l~~l~~-~~~~~i~tn~-~~~~~~~~l~~--l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~  172 (240)
T 3smv_A           97 NWPAFPDTVEALQYLKK-HYKLVILSNI-DRNEFKLSNAK--LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEK  172 (240)
T ss_dssp             GCCBCTTHHHHHHHHHH-HSEEEEEESS-CHHHHHHHHTT--TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCG
T ss_pred             cCCCCCcHHHHHHHHHh-CCeEEEEeCC-ChhHHHHHHHh--cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCc
Confidence            45789999999999999 8999999999 88888888887  568898765432     4778888888   89999999


Q ss_pred             CcEEEEeCCc-CCcccccccCceEEEECCC
Q psy8911         235 KDMVFFDDEE-RNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       235 ~~~l~igD~~-~di~~a~~aG~~~i~v~~g  263 (280)
                      ++|++|||+. +|+++|+++|+.++++..+
T Consensus       173 ~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~  202 (240)
T 3smv_A          173 KDILHTAESLYHDHIPANDAGLVSAWIYRR  202 (240)
T ss_dssp             GGEEEEESCTTTTHHHHHHHTCEEEEECTT
T ss_pred             hhEEEECCCchhhhHHHHHcCCeEEEEcCC
Confidence            9999999996 9999999999999998744

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.71  E-value=1.4e-17  Score=137.42  Aligned_cols=101  Identities=18%  Similarity=0.190  Sum_probs=91.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++|++.++|+.|++.|++++++||+ ....++..++.+++..+|+.+....     +|++..+..+++++|++|+++
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~  170 (226)
T 1te2_A           92 TRPLLPGVREAVALCKEQGLLVGLASAS-PLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTC  170 (226)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGE
T ss_pred             cCCcCccHHHHHHHHHHCCCcEEEEeCC-cHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHe
Confidence            3578999999999999999999999999 8888889999999999998754432     366889999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      ++|||+.+|+++++++|+.++++.++.
T Consensus       171 i~iGD~~nDi~~a~~aG~~~~~~~~~~  197 (226)
T 1te2_A          171 VALEDSVNGMIASKAARMRSIVVPAPE  197 (226)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEECCCTT
T ss_pred             EEEeCCHHHHHHHHHcCCEEEEEcCCC
Confidence            999999999999999999999998765

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.70  E-value=2.9e-17  Score=140.61  Aligned_cols=100  Identities=12%  Similarity=0.163  Sum_probs=88.9

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---CCccccccceE---ecCCCHHHHHHHHHHcCCCCC
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---NLNQYFSNKEI---YPGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---gl~~~f~~~~~---~~~~k~~~~~~~~~~~~~~~~  235 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....++..++++   ||.+||+.+..   ..+|+|+.|+.+++++|++|+
T Consensus       127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~-~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~  205 (261)
T 1yns_A          127 MKAEFFADVVPAVRKWREAGMKVYIYSSG-SVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN  205 (261)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred             cccccCcCHHHHHHHHHhCCCeEEEEeCC-CHHHHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcc
Confidence            34789999999999999999999999999 888888888855   59999996432   245777999999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +|+||||+..|+.+|+++||.+|+|.+
T Consensus       206 ~~l~VgDs~~di~aA~~aG~~~i~v~~  232 (261)
T 1yns_A          206 NILFLTDVTREASAAEEADVHVAVVVR  232 (261)
T ss_dssp             GEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             cEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence            999999999999999999999999975

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.70  E-value=1.7e-17  Score=139.63  Aligned_cols=100  Identities=18%  Similarity=0.233  Sum_probs=89.9

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIE   80 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~   80 (280)
                      ...+.++||+.++|+.|+++|++++|+||++. ..++..++.+++. +|+  .+++++       ++..|+.+++++|++
T Consensus       106 ~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~-~f~--~~~~~~~~~~~Kp~p~~~~~~~~~l~~~  181 (240)
T 2hi0_A          106 QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPN-EAVQVLVEELFPG-SFD--FALGEKSGIRRKPAPDMTSECVKVLGVP  181 (240)
T ss_dssp             SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHSTT-TCS--EEEEECTTSCCTTSSHHHHHHHHHHTCC
T ss_pred             hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCc-cee--EEEecCCCCCCCCCHHHHHHHHHHcCCC
Confidence            45678999999999999999999999999999 8889999999998 999  666543       234499999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|++|||+.+|+++|+++|+.+|++.++.
T Consensus       182 ~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~  212 (240)
T 2hi0_A          182 RDKCVYIGDSEIDIQTARNSEMDEIAVNWGF  212 (240)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEEESSSS
T ss_pred             HHHeEEEcCCHHHHHHHHHCCCeEEEECCCC
Confidence            9999999999999999999999999998765

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.70  E-value=6e-18  Score=146.22  Aligned_cols=209  Identities=12%  Similarity=0.142  Sum_probs=141.5

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecC---CCchHHHHHHHhhcCcc-ccccccceecCCChhHHHHHHHHhCCCCccEE-E
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASR---TSEIQGAQQLLDLFNWN-QYFDHKQIFPGQKTTHFANLKKATGIEYKDMV-F   86 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn---~~~~~~~~~~l~~~~l~-~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l-~   86 (280)
                      .++|++.+.|+.|+++|++++++||   .+. ......++.+++. ..++  .++++....  ...+++ +. |.++. +
T Consensus        30 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~-~~~~~~l~~lg~~~~~~~--~ii~~~~~~--~~~l~~-~~-~~~v~~~  102 (284)
T 2hx1_A           30 GLLPGIENTFDYLKAQGQDYYIVTNDASRSP-EQLADSYHKLGLFSITAD--KIISSGMIT--KEYIDL-KV-DGGIVAY  102 (284)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEECCCSSCH-HHHHHHHHHTTCTTCCGG--GEEEHHHHH--HHHHHH-HC-CSEEEEE
T ss_pred             eeChhHHHHHHHHHHCCCEEEEEeCCCCcCH-HHHHHHHHHCCcCCCCHh--hEEcHHHHH--HHHHHh-hc-CCcEEEE
Confidence            4689999999999999999999998   344 5566778888987 7777  676654332  222222 12 33676 7


Q ss_pred             EeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceecc
Q psy8911          87 FDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKY  166 (280)
Q Consensus        87 v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (280)
                      +|.. ......++.|+....-.. ....       ...-...+....|                           ..+..
T Consensus       103 lg~~-~l~~~l~~~G~~~~~~~~-~~~~-------~~~~~~avv~~~~---------------------------~~~~~  146 (284)
T 2hx1_A          103 LGTA-NSANYLVSDGIKMLPVSA-IDDS-------NIGEVNALVLLDD---------------------------EGFNW  146 (284)
T ss_dssp             ESCH-HHHHTTCBTTEEEEEGGG-CCTT-------TGGGEEEEEECCS---------------------------SSSCH
T ss_pred             ecCH-HHHHHHHHCCCeeccCCC-CCcc-------cCCCCCEEEEeCC---------------------------CCcCc
Confidence            8874 445666778876542110 0000       0000112122111                           11122


Q ss_pred             CCCHHHHHHHHhhCCcEEEEEcCCCcHHHH--H--HHHhhCCCccccccce-----EecCCCHHHHHHHHHHc----CCC
Q psy8911         167 YRGVPEILRYLKENKCLVAAASRTSEILHA--K--QILNLINLNQYFSNKE-----IYPGPKTTHFESLKKAT----GIE  233 (280)
Q Consensus       167 ~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~--~--~~l~~~gl~~~f~~~~-----~~~~~k~~~~~~~~~~~----~~~  233 (280)
                      .+....+++.|+++|++ +|+||+ .....  .  ..++..++.++|+.+.     ...+|++..|..+++++    |++
T Consensus       147 ~~~~~~l~~~L~~~g~~-~i~tn~-~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  224 (284)
T 2hx1_A          147 FHDLNKTVNLLRKRTIP-AIVANT-DNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEIS  224 (284)
T ss_dssp             HHHHHHHHHHHHHCCCC-EEEECC-CSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCC
T ss_pred             cccHHHHHHHHhcCCCe-EEEECC-CccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCC
Confidence            24566667789999999 999999 55433  2  2235668888888542     23468889999999999    999


Q ss_pred             CCcEEEEeCCc-CCcccccccCceEEEECCCCC
Q psy8911         234 YKDMVFFDDEE-RNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       234 ~~~~l~igD~~-~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |++|+||||++ +|+.+|+++||.+++|.+|..
T Consensus       225 ~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~  257 (284)
T 2hx1_A          225 KREILMVGDTLHTDILGGNKFGLDTALVLTGNT  257 (284)
T ss_dssp             GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSS
T ss_pred             cceEEEECCCcHHHHHHHHHcCCeEEEECCCCC
Confidence            99999999996 999999999999999998864

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.70  E-value=1.2e-17  Score=137.02  Aligned_cols=95  Identities=15%  Similarity=0.110  Sum_probs=84.6

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccc-cceEec--------CCCHHHHHHHHHHcCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS-NKEIYP--------GPKTTHFESLKKATGIE  233 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~-~~~~~~--------~~k~~~~~~~~~~~~~~  233 (280)
                      .+.++||+.++|+.|+++ ++++|+||+ ....++..++++|+..+|+ .+.+..        .|+|..+..++++++++
T Consensus        67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~-~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~  144 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRER-FQVVILSDT-FYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL  144 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTT-SEEEEEEEE-EHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred             hcCCCccHHHHHHHHHhc-CcEEEEECC-hHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhc
Confidence            567899999999999999 999999999 8899999999999999994 433311        27888999999999999


Q ss_pred             CCcEEEEeCCcCCcccccccCceEEE
Q psy8911         234 YKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       234 ~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      |++|+||||+.+|+.+|+++|+.++.
T Consensus       145 ~~~~~~iGD~~~Di~~a~~aG~~~~~  170 (206)
T 1rku_A          145 YYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             TCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             CCEEEEEeCChhhHHHHHhcCccEEE
Confidence            99999999999999999999998764

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.69  E-value=4.5e-17  Score=131.27  Aligned_cols=117  Identities=9%  Similarity=-0.013  Sum_probs=90.8

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      ..++++||+||||+|.......  .    .....    ...+.++.  +|+.|+++|++++|+||+ ....++..++++|
T Consensus        11 ~~k~vifD~DGTL~d~~~~~~~--~----~~~~~----~~~~~~~~--~l~~L~~~g~~~~i~T~~-~~~~~~~~~~~lg   77 (176)
T 3mmz_A           11 DIDAVVLDFDGTQTDDRVLIDS--D----GREFV----SVHRGDGL--GIAALRKSGLTMLILSTE-QNPVVAARARKLK   77 (176)
T ss_dssp             GCSEEEECCTTTTSCSCCEECT--T----CCEEE----EEEHHHHH--HHHHHHHTTCEEEEEESS-CCHHHHHHHHHHT
T ss_pred             cCCEEEEeCCCCcCcCCEeecC--C----ccHhH----hcccccHH--HHHHHHHCCCeEEEEECc-ChHHHHHHHHHcC
Confidence            4579999999999983221100  0    00000    01111222  799999999999999999 8889999999999


Q ss_pred             CccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         205 LNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       205 l~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      +. +|..    ..||+..++.++++++++|++++||||+.+|+.+++++|+.++.
T Consensus        78 i~-~~~~----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~  127 (176)
T 3mmz_A           78 IP-VLHG----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV  127 (176)
T ss_dssp             CC-EEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred             Ce-eEeC----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC
Confidence            99 6654    37899999999999999999999999999999999999987543

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.69  E-value=4.6e-17  Score=139.36  Aligned_cols=98  Identities=14%  Similarity=0.246  Sum_probs=86.6

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc---CccccccccceecC---C--ChhHHHHHHHHhCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF---NWNQYFDHKQIFPG---Q--KTTHFANLKKATGIE   80 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~---~l~~~fd~~~i~~~---~--~~~~~~~~~~~~g~~   80 (280)
                      ..+.+|||+.++|+.|+++|++++|+||++. ..++..++.+   ++.+|||  .++++   .  ++..|+.+++++|++
T Consensus       127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~l~~~~~~~l~~~fd--~i~~~~~~~KP~p~~~~~~~~~lg~~  203 (261)
T 1yns_A          127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSV-EAQKLLFGHSTEGDILELVD--GHFDTKIGHKVESESYRKIADSIGCS  203 (261)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHTBTTBCCGGGCS--EEECGGGCCTTCHHHHHHHHHHHTSC
T ss_pred             cccccCcCHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHhhcccChHhhcc--EEEecCCCCCCCHHHHHHHHHHhCcC
Confidence            4578999999999999999999999999999 8888888854   6999999  55443   2  234599999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      |++|+||||+..|+.+|+++||++|++.+
T Consensus       204 p~~~l~VgDs~~di~aA~~aG~~~i~v~~  232 (261)
T 1yns_A          204 TNNILFLTDVTREASAAEEADVHVAVVVR  232 (261)
T ss_dssp             GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             cccEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence            99999999999999999999999999965

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.69  E-value=2.2e-17  Score=134.88  Aligned_cols=118  Identities=17%  Similarity=0.250  Sum_probs=94.5

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCce---eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTL---IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN  201 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~  201 (280)
                      ..++++||+||||++.....             ......   ..+.++.  .|+.|+++|++++|+||+ ....++..++
T Consensus        18 ~ik~vifD~DGtL~~~~~~~-------------~~~~~~~~~~~~~d~~--~l~~L~~~g~~~~ivTn~-~~~~~~~~l~   81 (191)
T 3n1u_A           18 KIKCLICDVDGVLSDGLLHI-------------DNHGNELKSFHVQDGM--GLKLLMAAGIQVAIITTA-QNAVVDHRME   81 (191)
T ss_dssp             TCSEEEECSTTTTBCSCCEE-------------CTTCCEECCBCHHHHH--HHHHHHHTTCEEEEECSC-CSHHHHHHHH
T ss_pred             cCCEEEEeCCCCCCCCceee-------------cCCchhhhhccccChH--HHHHHHHCCCeEEEEeCc-ChHHHHHHHH
Confidence            35799999999999742211             011111   1112222  589999999999999999 8889999999


Q ss_pred             hCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         202 LINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       202 ~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      .+|+..+|+..    +||+..+..++++++++|++++||||+.+|+.+++++|+.++ +.++
T Consensus        82 ~lgl~~~~~~~----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~-~~~~  138 (191)
T 3n1u_A           82 QLGITHYYKGQ----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVA-VSNA  138 (191)
T ss_dssp             HHTCCEEECSC----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTC
T ss_pred             HcCCccceeCC----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEE-eCCc
Confidence            99999999864    799999999999999999999999999999999999999874 4433

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.69  E-value=5.3e-17  Score=130.60  Aligned_cols=107  Identities=13%  Similarity=0.142  Sum_probs=86.2

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCch--------------HHHHHHHhhcC--cccccccc-----c-eecCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI--------------QGAQQLLDLFN--WNQYFDHK-----Q-IFPGQK   66 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--------------~~~~~~l~~~~--l~~~fd~~-----~-i~~~~~   66 (280)
                      ..++++||+.++|+.|+++|++++|+||++..              ..++..++.++  +..+|...     . ....++
T Consensus        24 ~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~  103 (179)
T 3l8h_A           24 DEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPL  103 (179)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTS
T ss_pred             HHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCC
Confidence            35789999999999999999999999999841              35677888888  55555310     0 111234


Q ss_pred             hhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCchhh
Q psy8911          67 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAI  115 (280)
Q Consensus        67 ~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~  115 (280)
                      ...|+.+++++|++|++|+||||+.+|+++|+++||+++++.++.....
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~  152 (179)
T 3l8h_A          104 PGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKT  152 (179)
T ss_dssp             SHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHH
T ss_pred             HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchh
Confidence            4569999999999999999999999999999999999999988765444

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.69  E-value=1.2e-18  Score=144.74  Aligned_cols=134  Identities=8%  Similarity=0.044  Sum_probs=93.5

Q ss_pred             cceeEEEecCCCCCCcccccc-----c-Cccccc--C----CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDL-----V-APFKKI--G----QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE  192 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~-----~-~~~~~~--~----~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~  192 (280)
                      +.+.++||+||||+|+.....     . +.....  .    ..+.........++|++.++|+.|+++|++++|+||+ .
T Consensus        36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~-~  114 (211)
T 2b82_A           36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGR-S  114 (211)
T ss_dssp             CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECS-C
T ss_pred             CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCC-c
Confidence            368999999999998643111     0 000000  0    0000000111235789999999999999999999999 6


Q ss_pred             HHHHHHHHhhCCCccccccc-------eE-ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         193 ILHAKQILNLINLNQYFSNK-------EI-YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       193 ~~~~~~~l~~~gl~~~f~~~-------~~-~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      ...++..++.  +.+||+.+       .. ..+|+++.|..+++++|+    |+||||+..|+++|+++||++++|.+|.
T Consensus       115 ~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~g~  188 (211)
T 2b82_A          115 PTKTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRAS  188 (211)
T ss_dssp             CCSSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred             HHHHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence            5555555555  55566543       11 134777889999999998    9999999999999999999999999875


Q ss_pred             C
Q psy8911         265 S  265 (280)
Q Consensus       265 ~  265 (280)
                      .
T Consensus       189 ~  189 (211)
T 2b82_A          189 N  189 (211)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.69  E-value=9.4e-18  Score=135.50  Aligned_cols=96  Identities=14%  Similarity=0.167  Sum_probs=85.2

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcEEE
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDMVF  239 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~l~  239 (280)
                      .++|++.++|+.|+++|++++++||+ .. .++..++.+++.++|+.+...     .+|++..|..+++++|++  +|++
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~t~~-~~-~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~  157 (190)
T 2fi1_A           82 ILFEGVSDLLEDISNQGGRHFLVSHR-ND-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV  157 (190)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSS-CT-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEECC-cH-HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence            38999999999999999999999998 54 577889999999999865332     247889999999999999  9999


Q ss_pred             EeCCcCCcccccccCceEEEECCCC
Q psy8911         240 FDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       240 igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      |||+.+|+++|+++|+.++++.++.
T Consensus       158 iGD~~~Di~~a~~aG~~~~~~~~~~  182 (190)
T 2fi1_A          158 IGDRPIDIEAGQAAGLDTHLFTSIV  182 (190)
T ss_dssp             EESSHHHHHHHHHTTCEEEECSCHH
T ss_pred             EcCCHHHHHHHHHcCCeEEEECCCC
Confidence            9999999999999999999998753

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.68  E-value=4.2e-17  Score=138.39  Aligned_cols=97  Identities=15%  Similarity=0.200  Sum_probs=85.3

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ...+++||+.++++.|+++|++++++|++..   +...++.+|+.+|||  .+++++       ++..|+.+++++|++|
T Consensus       113 ~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~---~~~~L~~~gl~~~Fd--~i~~~~~~~~~KP~p~~~~~a~~~lg~~p  187 (250)
T 4gib_A          113 TSNDILPGIESLLIDVKSNNIKIGLSSASKN---AINVLNHLGISDKFD--FIADAGKCKNNKPHPEIFLMSAKGLNVNP  187 (250)
T ss_dssp             CGGGSCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHHTCGGGCS--EECCGGGCCSCTTSSHHHHHHHHHHTCCG
T ss_pred             cccccchhHHHHHHHHHhcccccccccccch---hhhHhhhcccccccc--eeecccccCCCCCcHHHHHHHHHHhCCCh
Confidence            3467899999999999999999999888765   567899999999999  676653       2345999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++|+||||++.|+++|+++||++|+|++.
T Consensus       188 ~e~l~VGDs~~Di~aA~~aG~~~i~v~~~  216 (250)
T 4gib_A          188 QNCIGIEDASAGIDAINSANMFSVGVGNY  216 (250)
T ss_dssp             GGEEEEESSHHHHHHHHHTTCEEEEESCT
T ss_pred             HHeEEECCCHHHHHHHHHcCCEEEEECCh
Confidence            99999999999999999999999999654

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.68  E-value=8e-18  Score=153.43  Aligned_cols=97  Identities=13%  Similarity=0.114  Sum_probs=86.3

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce-------Ee--------cCCCHHHHHHH
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE-------IY--------PGPKTTHFESL  226 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~-------~~--------~~~k~~~~~~~  226 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....++..++.+|+..+|....       .+        .+||+..|..+
T Consensus       253 ~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~-~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~  331 (415)
T 3p96_A          253 GQLELMPGARTTLRTLRRLGYACGVVSGG-FRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREF  331 (415)
T ss_dssp             HHCCBCTTHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred             HhCccCccHHHHHHHHHHCCCEEEEEcCC-cHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHH
Confidence            35689999999999999999999999999 8999999999999998886421       11        23677889999


Q ss_pred             HHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         227 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       227 ~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      ++++|++|++|+||||+.+|+.+|+++|+.+++
T Consensus       332 ~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~  364 (415)
T 3p96_A          332 AQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF  364 (415)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence            999999999999999999999999999998776

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.68  E-value=1.6e-17  Score=139.72  Aligned_cols=95  Identities=6%  Similarity=0.071  Sum_probs=85.5

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+++ ++++++||+ ....++..++.+|+.  |+.+...     .+|++..|..+++++|++|++|
T Consensus       114 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~-~~~~~~~~l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  189 (254)
T 3umg_A          114 VLTPWPDSVPGLTAIKAE-YIIGPLSNG-NTSLLLDMAKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEV  189 (254)
T ss_dssp             SCCBCTTHHHHHHHHHHH-SEEEECSSS-CHHHHHHHHHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGE
T ss_pred             hCcCCcCHHHHHHHHHhC-CeEEEEeCC-CHHHHHHHHHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHE
Confidence            457899999999999997 999999999 888899999999986  7754322     2488899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEEC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ++|||+.+|+++|+++|+.+++++
T Consensus       190 ~~iGD~~~Di~~a~~aG~~~~~~~  213 (254)
T 3umg_A          190 MLAAAHNGDLEAAHATGLATAFIL  213 (254)
T ss_dssp             EEEESCHHHHHHHHHTTCEEEEEC
T ss_pred             EEEeCChHhHHHHHHCCCEEEEEe
Confidence            999999999999999999999998

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.68  E-value=2.5e-17  Score=135.80  Aligned_cols=101  Identities=13%  Similarity=0.085  Sum_probs=90.5

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++|++.++|+.|+++|++++++||+ ....++..++.+++..+|+.+...     .+|++..+..+++++|++|+++
T Consensus        87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~  165 (225)
T 3d6j_A           87 NTILFPDTLPTLTHLKKQGIRIGIISTK-YRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEV  165 (225)
T ss_dssp             GCEECTTHHHHHHHHHHHTCEEEEECSS-CHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGE
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEECC-CHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHe
Confidence            4567999999999999999999999999 888889999999999999864332     2467789999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      ++|||+.+|+.+++.+|+.++.+.++.
T Consensus       166 i~iGD~~nDi~~~~~aG~~~~~~~~~~  192 (225)
T 3d6j_A          166 LYIGDSTVDAGTAAAAGVSFTGVTSGM  192 (225)
T ss_dssp             EEEESSHHHHHHHHHHTCEEEEETTSS
T ss_pred             EEEcCCHHHHHHHHHCCCeEEEECCCC
Confidence            999999999999999999999998764

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.68  E-value=1.2e-16  Score=129.98  Aligned_cols=118  Identities=12%  Similarity=0.079  Sum_probs=93.8

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC-CCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY-RGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      ..+++.||+||||++.....             .........+ ..-..+|+.|+++|++++|+||+ ....++..++++
T Consensus        25 ~ik~vifD~DGTL~~~~~~~-------------~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~-~~~~~~~~l~~l   90 (188)
T 2r8e_A           25 NIRLLILDVDGVLSDGLIYM-------------GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGR-KAKLVEDRCATL   90 (188)
T ss_dssp             TCSEEEECCCCCCBCSEEEE-------------ETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSS-CCHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCcCCCCEEe-------------cCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCC-ChHHHHHHHHHc
Confidence            45899999999999743211             0111111111 11123799999999999999999 888899999999


Q ss_pred             CCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911         204 NLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       204 gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      |+..+|+.    ..||+..+..+++++|++|++++||||+.+|+.+++++|+.++..
T Consensus        91 gl~~~~~~----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~  143 (188)
T 2r8e_A           91 GITHLYQG----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA  143 (188)
T ss_dssp             TCCEEECS----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred             CCceeecC----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec
Confidence            99988874    379999999999999999999999999999999999999988653

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.67  E-value=3.1e-17  Score=147.38  Aligned_cols=102  Identities=15%  Similarity=0.170  Sum_probs=92.8

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccc--cceEe----------------cCCCHHHHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS--NKEIY----------------PGPKTTHFE  224 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~--~~~~~----------------~~~k~~~~~  224 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....++..++++|+.+||+  .+.+.                .+|+|+.|.
T Consensus       213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~-~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~  291 (384)
T 1qyi_A          213 ILRPVDEVKVLLNDLKGAGFELGIATGR-PYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI  291 (384)
T ss_dssp             BSSCHHHHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred             CCCcCcCHHHHHHHHHhCCCEEEEEeCC-cHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence            5689999999999999999999999999 8889999999999999998  44331                457789999


Q ss_pred             HHHHHcC--------------CCCCcEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         225 SLKKATG--------------IEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       225 ~~~~~~~--------------~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      .+++++|              ++|++|+||||+..|+++|+++||.+|+|++|..
T Consensus       292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~  346 (384)
T 1qyi_A          292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK  346 (384)
T ss_dssp             HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred             HHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCcc
Confidence            9999999              9999999999999999999999999999998864

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.67  E-value=1.9e-16  Score=132.99  Aligned_cols=101  Identities=15%  Similarity=0.231  Sum_probs=92.1

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcEE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      ..++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+.+..     +|++..|..+++++|++|++|+
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i  171 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDG-NPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEAL  171 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECS-CHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECC-CchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            468999999999999999999999999 8888899999999999999765432     4778999999999999999999


Q ss_pred             EEeCCc-CCcccccccCceEEEECCCCC
Q psy8911         239 FFDDEE-RNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       239 ~igD~~-~di~~a~~aG~~~i~v~~g~~  265 (280)
                      ||||+. +|+.+|+++|+.+++|++|..
T Consensus       172 ~iGD~~~~Di~~a~~aG~~~~~v~~g~~  199 (241)
T 2hoq_A          172 MVGDRLYSDIYGAKRVGMKTVWFRYGKH  199 (241)
T ss_dssp             EEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred             EECCCchHhHHHHHHCCCEEEEECCCCC
Confidence            999998 999999999999999988764

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.67  E-value=3.1e-17  Score=141.09  Aligned_cols=106  Identities=13%  Similarity=0.098  Sum_probs=92.3

Q ss_pred             ceeccCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCC---
Q psy8911         162 TLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGI---  232 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~---  232 (280)
                      ....++||+.++|+.|+++ |++++|+||+ ....++..++.+++. +|+.+.+.+     +|+++.|..+++++|+   
T Consensus       111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~-~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~  188 (275)
T 2qlt_A          111 EHSIEVPGAVKLCNALNALPKEKWAVATSG-TRDMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPIN  188 (275)
T ss_dssp             TTCEECTTHHHHHHHHHTSCGGGEEEECSS-CHHHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCC
T ss_pred             cCCCcCcCHHHHHHHHHhccCCeEEEEeCC-CHHHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCcc
Confidence            3467899999999999999 9999999999 888889999999987 466543322     3778999999999999   


Q ss_pred             ----CCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHH
Q psy8911         233 ----EYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVL  269 (280)
Q Consensus       233 ----~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~  269 (280)
                          +|++|++|||+.+|+++|+++|+.++.|.++....++
T Consensus       189 ~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~  229 (275)
T 2qlt_A          189 EQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFL  229 (275)
T ss_dssp             SSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHH
T ss_pred             ccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHH
Confidence                9999999999999999999999999999988775554

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.67  E-value=1.4e-16  Score=133.07  Aligned_cols=101  Identities=20%  Similarity=0.210  Sum_probs=91.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p   81 (280)
                      ....++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|+  .+++++.       ...|+.+++++|++|
T Consensus       101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~lg~~~  177 (237)
T 4ex6_A          101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVE-KAARAIAELTGLDTRLT--VIAGDDSVERGKPHPDMALHVARGLGIPP  177 (237)
T ss_dssp             GGGGBCTTHHHHHHHHHHTTEEEEEECSSCH-HHHHHHHHHHTGGGTCS--EEECTTTSSSCTTSSHHHHHHHHHHTCCG
T ss_pred             cCCccCCCHHHHHHHHHhCCCcEEEEcCCCh-HHHHHHHHHcCchhhee--eEEeCCCCCCCCCCHHHHHHHHHHcCCCH
Confidence            4567999999999999999999999999999 88999999999999999  6766543       334999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|++|||+.+|+.+|+++|+.+++|..+..
T Consensus       178 ~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~  208 (237)
T 4ex6_A          178 ERCVVIGDGVPDAEMGRAAGMTVIGVSYGVS  208 (237)
T ss_dssp             GGEEEEESSHHHHHHHHHTTCEEEEESSSSS
T ss_pred             HHeEEEcCCHHHHHHHHHCCCeEEEEecCCC
Confidence            9999999999999999999999999987643

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.67  E-value=1.9e-17  Score=126.87  Aligned_cols=101  Identities=14%  Similarity=0.100  Sum_probs=89.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p   81 (280)
                      ....++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|+  .++++       ++...|+.+++++|++|
T Consensus        15 ~~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~-~~~~~~l~~~~l~~~f~--~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~   91 (137)
T 2pr7_A           15 GTDEDQRRWRNLLAAAKKNGVGTVILSNDPG-GLGAAPIRELETNGVVD--KVLLSGELGVEKPEEAAFQAAADAIDLPM   91 (137)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTCEEEEEECSCC-GGGGHHHHHHHHTTSSS--EEEEHHHHSCCTTSHHHHHHHHHHTTCCG
T ss_pred             CCCccCccHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHCChHhhcc--EEEEeccCCCCCCCHHHHHHHHHHcCCCc
Confidence            3567899999999999999999999999999 78889999999999999  66543       23445999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|+||||+..|+++|+++|+.++++.++..
T Consensus        92 ~~~~~vgD~~~di~~a~~~G~~~i~~~~~~~  122 (137)
T 2pr7_A           92 RDCVLVDDSILNVRGAVEAGLVGVYYQQFDR  122 (137)
T ss_dssp             GGEEEEESCHHHHHHHHHHTCEEEECSCHHH
T ss_pred             ccEEEEcCCHHHHHHHHHCCCEEEEeCChHH
Confidence            9999999999999999999999999976543

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.66  E-value=3e-17  Score=138.45  Aligned_cols=95  Identities=9%  Similarity=0.097  Sum_probs=85.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceE-----ecCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI-----YPGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++|++.++|+.|++. ++++++||+ ....+...++.+|+.  |+.+..     ..+|++..|..+++++|++|++|
T Consensus       118 ~~~~~~~~~~~l~~l~~~-~~~~i~s~~-~~~~~~~~l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  193 (254)
T 3umc_A          118 RLRPWPDTLAGMHALKAD-YWLAALSNG-NTALMLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEV  193 (254)
T ss_dssp             SCEECTTHHHHHHHHTTT-SEEEECCSS-CHHHHHHHHHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred             cCCCCccHHHHHHHHHhc-CeEEEEeCC-CHHHHHHHHHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHE
Confidence            457899999999999986 999999999 888889999999986  775422     23488899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEEC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ++|||+.+|+++|+++|+.++++.
T Consensus       194 ~~iGD~~~Di~~a~~aG~~~~~~~  217 (254)
T 3umc_A          194 MLCAAHNYDLKAARALGLKTAFIA  217 (254)
T ss_dssp             EEEESCHHHHHHHHHTTCEEEEEC
T ss_pred             EEEcCchHhHHHHHHCCCeEEEEe
Confidence            999999999999999999999998

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.66  E-value=2.5e-16  Score=133.07  Aligned_cols=103  Identities=13%  Similarity=0.207  Sum_probs=93.5

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEe
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFD  241 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~ig  241 (280)
                      ....++||+.++|+.|+ +|++++|+||+ ....+...++.+|+.++|+.+.+.++|++..|..+++++|++|++|++||
T Consensus       109 ~~~~~~~~~~~~l~~l~-~~~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iG  186 (251)
T 2pke_A          109 HPVEVIAGVREAVAAIA-ADYAVVLITKG-DLFHQEQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPAERFVMIG  186 (251)
T ss_dssp             CCCCBCTTHHHHHHHHH-TTSEEEEEEES-CHHHHHHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCGGGEEEEE
T ss_pred             ccCCcCccHHHHHHHHH-CCCEEEEEeCC-CHHHHHHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCchhEEEEC
Confidence            34678999999999999 99999999999 88888999999999999998777778999999999999999999999999


Q ss_pred             CCc-CCcccccccCceEEEECCCCCH
Q psy8911         242 DEE-RNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       242 D~~-~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      |+. +|+.+|+++|+.+++|++|..+
T Consensus       187 D~~~~Di~~a~~aG~~~~~v~~~~~~  212 (251)
T 2pke_A          187 NSLRSDVEPVLAIGGWGIYTPYAVTW  212 (251)
T ss_dssp             SCCCCCCHHHHHTTCEEEECCCC---
T ss_pred             CCchhhHHHHHHCCCEEEEECCCCcc
Confidence            999 9999999999999999887653

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.66  E-value=2e-17  Score=138.11  Aligned_cols=96  Identities=9%  Similarity=0.078  Sum_probs=82.3

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceE----------e-c----CCCHHHHHHHHHH
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI----------Y-P----GPKTTHFESLKKA  229 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~----------~-~----~~k~~~~~~~~~~  229 (280)
                      .++||+.++|+.|+++|++++|+||+ ....++.+++++|+.++|.....          . +    .+|+..+..++++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~  170 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTAT-NSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG  170 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence            57999999999999999999999999 89999999999999877764211          0 1    1345668999999


Q ss_pred             cC---CCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         230 TG---IEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       230 ~~---~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      +|   ++|++|++|||+.+|+.+++++|+.++..+
T Consensus       171 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~  205 (232)
T 3fvv_A          171 MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANP  205 (232)
T ss_dssp             TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESC
T ss_pred             cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECc
Confidence            99   999999999999999999999999887643

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.66  E-value=2.1e-16  Score=131.45  Aligned_cols=101  Identities=25%  Similarity=0.329  Sum_probs=91.3

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIE   80 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~   80 (280)
                      ...++++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|+  .+++++       +...|+.+++++|++
T Consensus        79 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~gl~~~f~--~i~~~~~~~~~Kp~~~~~~~~~~~~~~~  155 (222)
T 2nyv_A           79 VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLE-ELSKKILDILNLSGYFD--LIVGGDTFGEKKPSPTPVLKTLEILGEE  155 (222)
T ss_dssp             CSSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCS--EEECTTSSCTTCCTTHHHHHHHHHHTCC
T ss_pred             cccCccCCCHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCCHHHhe--EEEecCcCCCCCCChHHHHHHHHHhCCC
Confidence            45689999999999999999999999999999 88999999999999999  666543       334599999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|++|||+.+|+.+|+++|+.++++.++.
T Consensus       156 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~  186 (222)
T 2nyv_A          156 PEKALIVGDTDADIEAGKRAGTKTALALWGY  186 (222)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEETTSS
T ss_pred             chhEEEECCCHHHHHHHHHCCCeEEEEcCCC
Confidence            9999999999999999999999999997654

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.66  E-value=2.5e-18  Score=140.43  Aligned_cols=89  Identities=7%  Similarity=-0.070  Sum_probs=78.5

Q ss_pred             ceeccCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911         162 TLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFF  240 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~i  240 (280)
                      ....++||+.++|+.|+++ |++++|+||+ ....++..++++|+   |+.+...         .+++++|++|++|+||
T Consensus        70 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~-~~~~~~~~l~~~gl---f~~i~~~---------~~~~~~~~~~~~~~~v  136 (193)
T 2i7d_A           70 LDLEPIPGALDAVREMNDLPDTQVFICTSP-LLKYHHCVGEKYRW---VEQHLGP---------QFVERIILTRDKTVVL  136 (193)
T ss_dssp             TTCCBCTTHHHHHHHHHTSTTEEEEEEECC-CSSCTTTHHHHHHH---HHHHHCH---------HHHTTEEECSCGGGBC
T ss_pred             ccCccCcCHHHHHHHHHhCCCCeEEEEeCC-ChhhHHHHHHHhCc---hhhhcCH---------HHHHHcCCCcccEEEE
Confidence            3578999999999999999 9999999999 77778888999988   7754321         3789999999999999


Q ss_pred             eCCcCC----ccccc-ccCceEEEECCC
Q psy8911         241 DDEERN----SHDVS-PLGVTCIHVKKG  263 (280)
Q Consensus       241 gD~~~d----i~~a~-~aG~~~i~v~~g  263 (280)
                      ||+..|    +.+|+ ++||++|+++++
T Consensus       137 gDs~~dD~~~i~~A~~~aG~~~i~~~~~  164 (193)
T 2i7d_A          137 GDLLIDDKDTVRGQEETPSWEHILFTCC  164 (193)
T ss_dssp             CSEEEESSSCCCSSCSSCSSEEEEECCG
T ss_pred             CCchhhCcHHHhhcccccccceEEEEec
Confidence            999999    99999 999999999764

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.66  E-value=6.3e-18  Score=138.51  Aligned_cols=88  Identities=8%  Similarity=-0.017  Sum_probs=80.3

Q ss_pred             eeccCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhhCCCcc-ccccceEecCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911         163 LIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQ-YFSNKEIYPGPKTTHFESLKKATGIEYKDMVFF  240 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~i  240 (280)
                      .+.++||+.++|+.|+++ |++++|+||+ ....++..++++|+.+ ||+             ..++++++++|++|+||
T Consensus        73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~-~~~~~~~~l~~~~l~~~~f~-------------~~~~~~l~~~~~~~~~v  138 (197)
T 1q92_A           73 ELEPLPGAVEAVKEMASLQNTDVFICTSP-IKMFKYCPYEKYAWVEKYFG-------------PDFLEQIVLTRDKTVVS  138 (197)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECC-CSCCSSHHHHHHHHHHHHHC-------------GGGGGGEEECSCSTTSC
T ss_pred             cCCcCcCHHHHHHHHHhcCCCeEEEEeCC-ccchHHHHHHHhchHHHhch-------------HHHHHHhccCCccEEEE
Confidence            578999999999999999 9999999999 7777788899999998 996             56788899999999999


Q ss_pred             eCCcCC----ccccc-ccCceEEEECCCC
Q psy8911         241 DDEERN----SHDVS-PLGVTCIHVKKGM  264 (280)
Q Consensus       241 gD~~~d----i~~a~-~aG~~~i~v~~g~  264 (280)
                      ||+..|    +++|+ ++||++|+++++.
T Consensus       139 gDs~~dD~~~~~~a~~~aG~~~i~~~~~~  167 (197)
T 1q92_A          139 ADLLIDDRPDITGAEPTPSWEHVLFTACH  167 (197)
T ss_dssp             CSEEEESCSCCCCSCSSCSSEEEEECCTT
T ss_pred             CcccccCCchhhhcccCCCceEEEecCcc
Confidence            999999    99999 9999999998654

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.66  E-value=5.3e-17  Score=132.81  Aligned_cols=94  Identities=23%  Similarity=0.281  Sum_probs=80.9

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe---------------cCCCHHHHHHHHH
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY---------------PGPKTTHFESLKK  228 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~---------------~~~k~~~~~~~~~  228 (280)
                      ..++|++.++|+.|+++|++++|+|++ ....++..++.+++..+|......               +.+|+..+..+++
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~  153 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGG-FDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK  153 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEE-EHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCC-cHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence            567899999999999999999999999 788888889999998887642211               1245688999999


Q ss_pred             HcCCCCCcEEEEeCCcCCcccccccCceEE
Q psy8911         229 ATGIEYKDMVFFDDEERNSHDVSPLGVTCI  258 (280)
Q Consensus       229 ~~~~~~~~~l~igD~~~di~~a~~aG~~~i  258 (280)
                      ++|++|++|++|||+.+|+.++++||+.++
T Consensus       154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~  183 (211)
T 1l7m_A          154 IEGINLEDTVAVGDGANDISMFKKAGLKIA  183 (211)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred             HcCCCHHHEEEEecChhHHHHHHHCCCEEE
Confidence            999999999999999999999999999754

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.65  E-value=1.3e-16  Score=145.43  Aligned_cols=123  Identities=15%  Similarity=0.154  Sum_probs=95.2

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc------------
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE------------  192 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~------------  192 (280)
                      ..+++.||+||||++......          +.........++||+.++|+.|+++|++++|+||+ .            
T Consensus        57 ~~k~v~fD~DGTL~~~~~~~~----------~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~-~gi~~g~~~~~~~  125 (416)
T 3zvl_A           57 QGKVAAFDLDGTLITTRSGKV----------FPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQ-MGIGRGKLPAEVF  125 (416)
T ss_dssp             CSSEEEECSBTTTEECSSCSS----------SCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEEC-HHHHTTSSCHHHH
T ss_pred             CCeEEEEeCCCCccccCCCcc----------CCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCC-ccccCCCCCHHHH
Confidence            457999999999985422110          00111112248999999999999999999999997 4            


Q ss_pred             HHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcC----CCCCcEEEEeCCc-----------------CC
Q psy8911         193 ILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATG----IEYKDMVFFDDEE-----------------RN  246 (280)
Q Consensus       193 ~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~----~~~~~~l~igD~~-----------------~d  246 (280)
                      ...++..++++|+.  |+.+.+..     +|++++|..+++++|    ++|++|+||||+.                 .|
T Consensus       126 ~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~D  203 (416)
T 3zvl_A          126 KGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCAD  203 (416)
T ss_dssp             HHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHH
T ss_pred             HHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhh
Confidence            22377889999984  77654432     377799999999998    9999999999997                 79


Q ss_pred             cccccccCceEEEE
Q psy8911         247 SHDVSPLGVTCIHV  260 (280)
Q Consensus       247 i~~a~~aG~~~i~v  260 (280)
                      +.+|+++|++++..
T Consensus       204 i~~A~~aGi~f~~p  217 (416)
T 3zvl_A          204 RLFALNVGLPFATP  217 (416)
T ss_dssp             HHHHHHHTCCEECH
T ss_pred             HHHHHHcCCcccCc
Confidence            99999999998753

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.65  E-value=8.3e-18  Score=156.41  Aligned_cols=101  Identities=19%  Similarity=0.171  Sum_probs=83.5

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCC--CcHHHHHHHHhhC--CCccccccceEe-----cCCCHHHHHHHHHHcCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRT--SEILHAKQILNLI--NLNQYFSNKEIY-----PGPKTTHFESLKKATGIE  233 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~--~~~~~~~~~l~~~--gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~  233 (280)
                      ...++||+.++|+.|+++|++++|+||+  ... .....++..  |+.+||+.+.+.     .+|+++.|+.+++++|++
T Consensus        98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~-~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~  176 (555)
T 3i28_A           98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDR-AERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS  176 (555)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCS-TTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred             hcCcChhHHHHHHHHHHCCCEEEEEeCCCcccc-chhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCC
Confidence            4579999999999999999999999996  111 112223333  788999986554     358889999999999999


Q ss_pred             CCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         234 YKDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       234 ~~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      |++|+||||+.+|+++|+++||.++++.++.
T Consensus       177 p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~  207 (555)
T 3i28_A          177 PSEVVFLDDIGANLKPARDLGMVTILVQDTD  207 (555)
T ss_dssp             GGGEEEEESCHHHHHHHHHHTCEEEECSSHH
T ss_pred             hhHEEEECCcHHHHHHHHHcCCEEEEECCCc
Confidence            9999999999999999999999999998654

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.65  E-value=1.5e-16  Score=142.93  Aligned_cols=102  Identities=14%  Similarity=0.148  Sum_probs=89.4

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceec------------------CCChhHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFP------------------GQKTTHF   70 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~------------------~~~~~~~   70 (280)
                      ..++++||+.++|+.|+++|++++|+||++. ..++..++.+|+.++|+...+++                  .+++..|
T Consensus       212 ~~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~-~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~  290 (384)
T 1qyi_A          212 IILRPVDEVKVLLNDLKGAGFELGIATGRPY-TETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSY  290 (384)
T ss_dssp             CBSSCHHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH
T ss_pred             cCCCcCcCHHHHHHHHHhCCCEEEEEeCCcH-HHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHH
Confidence            3568999999999999999999999999999 89999999999999998212332                  2334459


Q ss_pred             HHHHHHhC--------------CCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          71 ANLKKATG--------------IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        71 ~~~~~~~g--------------~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ..+++++|              ++|++|+||||+..|+.+|+++||.+|+++++.
T Consensus       291 ~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~  345 (384)
T 1qyi_A          291 IAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL  345 (384)
T ss_dssp             HHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBT
T ss_pred             HHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCc
Confidence            99999999              999999999999999999999999999998765

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.65  E-value=2.6e-16  Score=130.38  Aligned_cols=99  Identities=13%  Similarity=0.166  Sum_probs=85.2

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCC---------------chHHHHHHHhhcCcccccccccee-----------
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTS---------------EIQGAQQLLDLFNWNQYFDHKQIF-----------   62 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~---------------~~~~~~~~l~~~~l~~~fd~~~i~-----------   62 (280)
                      ..++++||+.++|+.|+++|++++|+||++               . ..++..++.+++.  |+  .++           
T Consensus        47 ~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gl~--f~--~~~~~~~~~~~~~~  121 (211)
T 2gmw_A           47 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLT-EWMDWSLADRDVD--LD--GIYYCPHHPQGSVE  121 (211)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHH-HHHHHHHHHTTCC--CS--EEEEECCBTTCSSG
T ss_pred             ccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHH-HHHHHHHHHcCCc--eE--EEEECCcCCCCccc
Confidence            346899999999999999999999999999               4 6788899999986  76  332           


Q ss_pred             --------cCCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeE-EEEcCCCc
Q psy8911          63 --------PGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC-ILVEDGMT  112 (280)
Q Consensus        63 --------~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~-i~v~~~~~  112 (280)
                              ..++...|+.+++++|++|++|+||||+.+|+.+|+++|+.+ +++.++..
T Consensus       122 ~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~  180 (211)
T 2gmw_A          122 EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKP  180 (211)
T ss_dssp             GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSC
T ss_pred             ccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCC
Confidence                    112344599999999999999999999999999999999999 99987654

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.64  E-value=1.1e-16  Score=136.47  Aligned_cols=95  Identities=13%  Similarity=0.233  Sum_probs=82.0

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC--C-------------CccccccceEecCCCHHHHHHHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI--N-------------LNQYFSNKEIYPGPKTTHFESLK  227 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~--g-------------l~~~f~~~~~~~~~k~~~~~~~~  227 (280)
                      ...++||+.++|+.    |++++|+||+ ....++..++++  |             +..+|+....+.+|.|+.|+.++
T Consensus       123 ~~~~~pgv~e~L~~----g~~l~i~Tn~-~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~  197 (253)
T 2g80_A          123 KAPVYADAIDFIKR----KKRVFIYSSG-SVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANIL  197 (253)
T ss_dssp             CBCCCHHHHHHHHH----CSCEEEECSS-CHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCCCHHHHHHc----CCEEEEEeCC-CHHHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHH
Confidence            46789999999887    8999999999 888888889887  5             44555542214578889999999


Q ss_pred             HHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         228 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       228 ~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +++|++|++|+||||++.|+++|+++||++++|.+
T Consensus       198 ~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~  232 (253)
T 2g80_A          198 RDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR  232 (253)
T ss_dssp             HHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred             HHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence            99999999999999999999999999999999975

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.64  E-value=5.7e-16  Score=128.25  Aligned_cols=103  Identities=17%  Similarity=0.203  Sum_probs=91.8

Q ss_pred             CCCcceecCCHHHHHHHHHHCC-ceEEEecCCCchHHHHHHHhhcCccccccccceecC--CChhHHHHHHHHhCCCCcc
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNN-CLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG--QKTTHFANLKKATGIEYKD   83 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g-~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~--~~~~~~~~~~~~~g~~p~~   83 (280)
                      +...+.++||+.++|+.|+++| ++++++||++. ...+..++.+++.++|+  .++++  ++...|+.+++++|++|++
T Consensus       100 ~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~-~~~~~~l~~~~~~~~f~--~~~~~~kpk~~~~~~~~~~lgi~~~~  176 (234)
T 3ddh_A          100 LKMPIELLPGVKETLKTLKETGKYKLVVATKGDL-LDQENKLERSGLSPYFD--HIEVMSDKTEKEYLRLLSILQIAPSE  176 (234)
T ss_dssp             TTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCH-HHHHHHHHHHTCGGGCS--EEEEESCCSHHHHHHHHHHHTCCGGG
T ss_pred             hhccCCcCccHHHHHHHHHhCCCeEEEEEeCCch-HHHHHHHHHhCcHhhhh--eeeecCCCCHHHHHHHHHHhCCCcce
Confidence            3456789999999999999999 99999999999 88899999999999999  55544  4555699999999999999


Q ss_pred             EEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911          84 MVFFDDEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        84 ~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      |++|||+. +|+++|+++|+.+++++++..
T Consensus       177 ~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~  206 (234)
T 3ddh_A          177 LLMVGNSFKSDIQPVLSLGGYGVHIPFEVM  206 (234)
T ss_dssp             EEEEESCCCCCCHHHHHHTCEEEECCCCTT
T ss_pred             EEEECCCcHHHhHHHHHCCCeEEEecCCcc
Confidence            99999996 999999999999999976543

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.64  E-value=1.7e-16  Score=132.09  Aligned_cols=99  Identities=13%  Similarity=0.194  Sum_probs=89.4

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~   82 (280)
                      .+.++||+.++|+.|+++|++++++||++. ...+..++.+++.++|+  .+++++       +...|+.+++++|++|+
T Consensus        97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  173 (233)
T 3umb_A           97 CLSAFPENVPVLRQLREMGLPLGILSNGNP-QMLEIAVKSAGMSGLFD--HVLSVDAVRLYKTAPAAYALAPRAFGVPAA  173 (233)
T ss_dssp             SCEECTTHHHHHHHHHTTTCCEEEEESSCH-HHHHHHHHTTTCTTTCS--EEEEGGGTTCCTTSHHHHTHHHHHHTSCGG
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCH-HHHHHHHHHCCcHhhcC--EEEEecccCCCCcCHHHHHHHHHHhCCCcc
Confidence            478999999999999999999999999999 88999999999999999  665542       23349999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +|++|||+.+|+.+|+++|+.++++.++.
T Consensus       174 ~~~~vGD~~~Di~~a~~~G~~~~~v~~~~  202 (233)
T 3umb_A          174 QILFVSSNGWDACGATWHGFTTFWINRLG  202 (233)
T ss_dssp             GEEEEESCHHHHHHHHHHTCEEEEECTTC
T ss_pred             cEEEEeCCHHHHHHHHHcCCEEEEEcCCC
Confidence            99999999999999999999999997653

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.64  E-value=2.1e-16  Score=130.83  Aligned_cols=101  Identities=20%  Similarity=0.243  Sum_probs=90.7

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p   81 (280)
                      ..+.++||+.++|+.|+++|++++++||++. ..++..++.+++.++|+  .+++++.       ...|+.+++++|++|
T Consensus        83 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~lgi~~  159 (226)
T 3mc1_A           83 FENKVYDGIEALLSSLKDYGFHLVVATSKPT-VFSKQILEHFKLAFYFD--AIVGSSLDGKLSTKEDVIRYAMESLNIKS  159 (226)
T ss_dssp             GSCCBCTTHHHHHHHHHHHTCEEEEEEEEEH-HHHHHHHHHTTCGGGCS--EEEEECTTSSSCSHHHHHHHHHHHHTCCG
T ss_pred             ccCccCcCHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhCCHhhee--eeeccCCCCCCCCCHHHHHHHHHHhCcCc
Confidence            3468999999999999999999999999999 88999999999999999  6665532       233999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|++|||+.+|+++|+++|+.++++..+..
T Consensus       160 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~  190 (226)
T 3mc1_A          160 DDAIMIGDREYDVIGALKNNLPSIGVTYGFG  190 (226)
T ss_dssp             GGEEEEESSHHHHHHHHTTTCCEEEESSSSS
T ss_pred             ccEEEECCCHHHHHHHHHCCCCEEEEccCCC
Confidence            9999999999999999999999999987653

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.64  E-value=3.2e-16  Score=130.11  Aligned_cols=99  Identities=15%  Similarity=0.106  Sum_probs=90.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ....++||+.++|+.|+++|++++|+||++. ...+..++.+++.++|+  .+++++       +...|+.+++++|++|
T Consensus        88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~l~~~~  164 (233)
T 3s6j_A           88 HQIIALPGAVELLETLDKENLKWCIATSGGI-DTATINLKALKLDINKI--NIVTRDDVSYGKPDPDLFLAAAKKIGAPI  164 (233)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHTTTCCTTSS--CEECGGGSSCCTTSTHHHHHHHHHTTCCG
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCCch-hhHHHHHHhcchhhhhh--eeeccccCCCCCCChHHHHHHHHHhCCCH
Confidence            4578999999999999999999999999999 88999999999999999  666542       2345999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++|++|||+.+|+.+|+++|+.++++..+
T Consensus       165 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~g  193 (233)
T 3s6j_A          165 DECLVIGDAIWDMLAARRCKATGVGLLSG  193 (233)
T ss_dssp             GGEEEEESSHHHHHHHHHTTCEEEEEGGG
T ss_pred             HHEEEEeCCHHhHHHHHHCCCEEEEEeCC
Confidence            99999999999999999999999999775

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.64  E-value=2.9e-16  Score=134.14  Aligned_cols=99  Identities=15%  Similarity=0.199  Sum_probs=88.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|++ +++++|+||+ ....++..++.+|+.+||+.+.+..     +|+++.|..+++++|++|++|
T Consensus       119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~-~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~  196 (260)
T 2gfh_A          119 HMILADDVKAMLTELRK-EVRLLLLTNG-DRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC  196 (260)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECS-CHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             cCCCCcCHHHHHHHHHc-CCcEEEEECc-ChHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhE
Confidence            35789999999999998 5999999999 8888899999999999999765432     477889999999999999999


Q ss_pred             EEEeCC-cCCcccccccCc-eEEEECCC
Q psy8911         238 VFFDDE-ERNSHDVSPLGV-TCIHVKKG  263 (280)
Q Consensus       238 l~igD~-~~di~~a~~aG~-~~i~v~~g  263 (280)
                      +||||+ .+|+++|+++|| .++++.++
T Consensus       197 ~~vGDs~~~Di~~A~~aG~~~~i~v~~~  224 (260)
T 2gfh_A          197 VMVGDTLETDIQGGLNAGLKATVWINKS  224 (260)
T ss_dssp             EEEESCTTTHHHHHHHTTCSEEEEECTT
T ss_pred             EEECCCchhhHHHHHHCCCceEEEEcCC
Confidence            999995 999999999999 89999754

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.64  E-value=4.9e-16  Score=130.46  Aligned_cols=100  Identities=11%  Similarity=0.190  Sum_probs=89.1

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~   82 (280)
                      .+.++||+.++|+.|+++|++++|+||++. ...+..++.+++..+|+  .+++++       +...|+.+++++|++|+
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~  168 (241)
T 2hoq_A           92 YLREVPGARKVLIRLKELGYELGIITDGNP-VKQWEKILRLELDDFFE--HVIISDFEGVKKPHPKIFKKALKAFNVKPE  168 (241)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCEEEEEECSCH-HHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEECCCc-hhHHHHHHHcCcHhhcc--EEEEeCCCCCCCCCHHHHHHHHHHcCCCcc
Confidence            356899999999999999999999999999 88899999999999999  665542       23459999999999999


Q ss_pred             cEEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911          83 DMVFFDDEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        83 ~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|++|||+. +|+.+|+++|+.+++++++..
T Consensus       169 ~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~  199 (241)
T 2hoq_A          169 EALMVGDRLYSDIYGAKRVGMKTVWFRYGKH  199 (241)
T ss_dssp             GEEEEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred             cEEEECCCchHhHHHHHHCCCEEEEECCCCC
Confidence            999999998 899999999999999976643

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.64  E-value=2.7e-16  Score=130.98  Aligned_cols=99  Identities=15%  Similarity=0.264  Sum_probs=89.0

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~   82 (280)
                      .+.++||+.++|+.|+++|++++|+||++. ..++..++.+++..+|+  .+++++       +...|+.+++++|++|+
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~  169 (232)
T 1zrn_A           93 RLAPFSEVPDSLRELKRRGLKLAILSNGSP-QSIDAVVSHAGLRDGFD--HLLSVDPVQVYKPDNRVYELAEQALGLDRS  169 (232)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCS--EEEESGGGTCCTTSHHHHHHHHHHHTSCGG
T ss_pred             cCCCCccHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHhcChHhhhh--eEEEecccCCCCCCHHHHHHHHHHcCCCcc
Confidence            468999999999999999999999999999 88999999999999999  666543       23349999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +|++|||+.+|+.+|+++|+.++++.++.
T Consensus       170 ~~~~iGD~~~Di~~a~~aG~~~~~~~~~~  198 (232)
T 1zrn_A          170 AILFVASNAWDATGARYFGFPTCWINRTG  198 (232)
T ss_dssp             GEEEEESCHHHHHHHHHHTCCEEEECTTC
T ss_pred             cEEEEeCCHHHHHHHHHcCCEEEEEcCCC
Confidence            99999999999999999999999997653

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.64  E-value=2.6e-16  Score=130.53  Aligned_cols=100  Identities=13%  Similarity=0.203  Sum_probs=90.3

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ....++||+.++|+.|+++|++++++||++. ...+..++.+++.++|+  .+++++       +...|+.+++++|++|
T Consensus        93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~  169 (230)
T 3um9_A           93 LSLTPFADVPQALQQLRAAGLKTAILSNGSR-HSIRQVVGNSGLTNSFD--HLISVDEVRLFKPHQKVYELAMDTLHLGE  169 (230)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHTCGGGCS--EEEEGGGTTCCTTCHHHHHHHHHHHTCCG
T ss_pred             hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHHCCChhhcc--eeEehhhcccCCCChHHHHHHHHHhCCCc
Confidence            4578999999999999999999999999999 88999999999999999  665542       2344999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ++|++|||+.+|+++|+++|+.++++.++.
T Consensus       170 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~  199 (230)
T 3um9_A          170 SEILFVSCNSWDATGAKYFGYPVCWINRSN  199 (230)
T ss_dssp             GGEEEEESCHHHHHHHHHHTCCEEEECTTS
T ss_pred             ccEEEEeCCHHHHHHHHHCCCEEEEEeCCC
Confidence            999999999999999999999999997653

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.64  E-value=1.3e-16  Score=132.31  Aligned_cols=99  Identities=19%  Similarity=0.208  Sum_probs=87.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc-ccceEe-----c--CCCHHHHHHHHHHcCCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNKEIY-----P--GPKTTHFESLKKATGIEY  234 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f-~~~~~~-----~--~~k~~~~~~~~~~~~~~~  234 (280)
                      ...++||+.++|+.|+.   +++|+||+ ....++..++.+++..+| +.+.+.     .  +||+..|..+++++|++|
T Consensus        85 ~~~~~~~~~~~l~~l~~---~~~i~s~~-~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~  160 (229)
T 2fdr_A           85 DVKIIDGVKFALSRLTT---PRCICSNS-SSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP  160 (229)
T ss_dssp             HCCBCTTHHHHHHHCCS---CEEEEESS-CHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCG
T ss_pred             CCccCcCHHHHHHHhCC---CEEEEECC-ChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCCh
Confidence            45789999999998875   89999999 888889999999999999 764332     3  577789999999999999


Q ss_pred             CcEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         235 KDMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       235 ~~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +++++|||+.+|+++|+++|+.++++.++..
T Consensus       161 ~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~  191 (229)
T 2fdr_A          161 DRVVVVEDSVHGIHGARAAGMRVIGFTGASH  191 (229)
T ss_dssp             GGEEEEESSHHHHHHHHHTTCEEEEECCSTT
T ss_pred             hHeEEEcCCHHHHHHHHHCCCEEEEEecCCc
Confidence            9999999999999999999999999987654

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.64  E-value=6.6e-16  Score=130.27  Aligned_cols=101  Identities=21%  Similarity=0.368  Sum_probs=90.8

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIE   80 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~   80 (280)
                      ...++++||+.++|+.|+++|++++|+||++. ..++.+++.+++.++|+  .+++++.       ...|+.+++++|++
T Consensus       110 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~gl~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~  186 (243)
T 2hsz_A          110 CNISRLYPNVKETLEALKAQGYILAVVTNKPT-KHVQPILTAFGIDHLFS--EMLGGQSLPEIKPHPAPFYYLCGKFGLY  186 (243)
T ss_dssp             TSSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCS--EEECTTTSSSCTTSSHHHHHHHHHHTCC
T ss_pred             cccCccCCCHHHHHHHHHHCCCEEEEEECCcH-HHHHHHHHHcCchheEE--EEEecccCCCCCcCHHHHHHHHHHhCcC
Confidence            45578999999999999999999999999999 88999999999999999  6665432       23499999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|++|||+.+|+.+|+++|+.++++.++.
T Consensus       187 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~  217 (243)
T 2hsz_A          187 PKQILFVGDSQNDIFAAHSAGCAVVGLTYGY  217 (243)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESSSC
T ss_pred             hhhEEEEcCCHHHHHHHHHCCCeEEEEcCCC
Confidence            9999999999999999999999999997764

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.64  E-value=2.2e-16  Score=129.41  Aligned_cols=94  Identities=15%  Similarity=0.082  Sum_probs=79.0

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC-
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY-   81 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p-   81 (280)
                      .++++||+.++|+.|+++|++++|+||++. ..+..++   +  .+|+  .++++++       +..|..+++++|+.| 
T Consensus        34 ~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~-~~~~~~~---~--~~~d--~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~  105 (196)
T 2oda_A           34 HAQLTPGAQNALKALRDQGMPCAWIDELPE-ALSTPLA---A--PVND--WMIAAPRPTAGWPQPDACWMALMALNVSQL  105 (196)
T ss_dssp             GGSBCTTHHHHHHHHHHHTCCEEEECCSCH-HHHHHHH---T--TTTT--TCEECCCCSSCTTSTHHHHHHHHHTTCSCS
T ss_pred             cCCcCcCHHHHHHHHHHCCCEEEEEcCChH-HHHHHhc---C--ccCC--EEEECCcCCCCCCChHHHHHHHHHcCCCCC
Confidence            468899999999999999999999999998 5553333   3  4678  5665432       344999999999975 


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ++|+||||+..|+++|+++||.+|+|.++.
T Consensus       106 ~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~  135 (196)
T 2oda_A          106 EGCVLISGDPRLLQSGLNAGLWTIGLASCG  135 (196)
T ss_dssp             TTCEEEESCHHHHHHHHHHTCEEEEESSSS
T ss_pred             ccEEEEeCCHHHHHHHHHCCCEEEEEccCC
Confidence            899999999999999999999999998764

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.64  E-value=2.2e-16  Score=134.89  Aligned_cols=97  Identities=19%  Similarity=0.300  Sum_probs=86.0

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~   82 (280)
                      .++++||+.++|+.|++ +++++|+||++. ..++..++.+|+.++|+  .+++++       ++..|+.+++++|++|+
T Consensus       119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~-~~~~~~l~~~gl~~~f~--~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~  194 (260)
T 2gfh_A          119 HMILADDVKAMLTELRK-EVRLLLLTNGDR-QTQREKIEACACQSYFD--AIVIGGEQKEEKPAPSIFYHCCDLLGVQPG  194 (260)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECSCH-HHHHHHHHHHTCGGGCS--EEEEGGGSSSCTTCHHHHHHHHHHHTCCGG
T ss_pred             cCCCCcCHHHHHHHHHc-CCcEEEEECcCh-HHHHHHHHhcCHHhhhh--eEEecCCCCCCCCCHHHHHHHHHHcCCChh
Confidence            46899999999999998 599999999999 88899999999999999  655442       23459999999999999


Q ss_pred             cEEEEeCC-cccccccccCCC-eEEEEcCC
Q psy8911          83 DMVFFDDE-ERNSHDVSPLGV-TCILVEDG  110 (280)
Q Consensus        83 ~~l~v~D~-~~~i~aa~~~G~-~~i~v~~~  110 (280)
                      +|+||||+ .+|+++|+++|+ .++++.++
T Consensus       195 ~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~  224 (260)
T 2gfh_A          195 DCVMVGDTLETDIQGGLNAGLKATVWINKS  224 (260)
T ss_dssp             GEEEEESCTTTHHHHHHHTTCSEEEEECTT
T ss_pred             hEEEECCCchhhHHHHHHCCCceEEEEcCC
Confidence            99999995 899999999999 89999654

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.64  E-value=8.8e-17  Score=135.15  Aligned_cols=92  Identities=10%  Similarity=0.062  Sum_probs=77.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-------------cCCCHHH-HH----
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-------------PGPKTTH-FE----  224 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-------------~~~k~~~-~~----  224 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ....++..++  ||.++ +.+...             ++|.+.. +.    
T Consensus        75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~-~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~  150 (236)
T 2fea_A           75 DAKIREGFREFVAFINEHEIPFYVISGG-MDFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC  150 (236)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEE-EHHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred             CCCCCccHHHHHHHHHhCCCeEEEEeCC-cHHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCC
Confidence            4689999999999999999999999999 8888888888  77665 543221             2244443 44    


Q ss_pred             ---HHHHHcCCCCCcEEEEeCCcCCcccccccCceEE
Q psy8911         225 ---SLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  258 (280)
Q Consensus       225 ---~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i  258 (280)
                         .++++++++|++|+||||+.+|+.+|+++|+.++
T Consensus       151 ~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~  187 (236)
T 2fea_A          151 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA  187 (236)
T ss_dssp             CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred             cHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeee
Confidence               8899999999999999999999999999999986

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.63  E-value=4.2e-16  Score=131.52  Aligned_cols=103  Identities=20%  Similarity=0.314  Sum_probs=92.4

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.+...     .+|++..|..+++++|++|++
T Consensus       111 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  189 (243)
T 2hsz_A          111 NISRLYPNVKETLEALKAQGYILAVVTNK-PTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQ  189 (243)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred             ccCccCCCHHHHHHHHHHCCCEEEEEECC-cHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhh
Confidence            34678999999999999999999999999 888899999999999999865332     237778999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |+||||+.+|+.+|+++|+.+++|.+|..
T Consensus       190 ~~~vGD~~~Di~~a~~aG~~~i~v~~g~~  218 (243)
T 2hsz_A          190 ILFVGDSQNDIFAAHSAGCAVVGLTYGYN  218 (243)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEEESSSCS
T ss_pred             EEEEcCCHHHHHHHHHCCCeEEEEcCCCC
Confidence            99999999999999999999999988753

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.63  E-value=4.6e-16  Score=130.46  Aligned_cols=99  Identities=15%  Similarity=0.255  Sum_probs=89.1

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~   82 (280)
                      .+.++||+.++|+.|+++|++++|+||++. ..++..++.+|+..+|+  .+++++       +...|+.+++++|++|+
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~  179 (240)
T 2no4_A          103 ELSAYPDAAETLEKLKSAGYIVAILSNGND-EMLQAALKASKLDRVLD--SCLSADDLKIYKPDPRIYQFACDRLGVNPN  179 (240)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCS--EEEEGGGTTCCTTSHHHHHHHHHHHTCCGG
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHhcCcHHHcC--EEEEccccCCCCCCHHHHHHHHHHcCCCcc
Confidence            367899999999999999999999999999 88999999999999999  665542       33349999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +|++|||+.+|+++|+++|+.++++.++.
T Consensus       180 ~~~~iGD~~~Di~~a~~aG~~~~~v~~~~  208 (240)
T 2no4_A          180 EVCFVSSNAWDLGGAGKFGFNTVRINRQG  208 (240)
T ss_dssp             GEEEEESCHHHHHHHHHHTCEEEEECTTC
T ss_pred             cEEEEeCCHHHHHHHHHCCCEEEEECCCC
Confidence            99999999999999999999999997654

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.63  E-value=4.8e-16  Score=126.94  Aligned_cols=98  Identities=16%  Similarity=0.261  Sum_probs=88.9

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~   82 (280)
                      .+.++||+.++|+.|+++|++++++||++. ..++..++.+++.++|+  .+++++       +...|+.+++++|++|+
T Consensus        87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  163 (214)
T 3e58_A           87 KELIFPDVLKVLNEVKSQGLEIGLASSSVK-ADIFRALEENRLQGFFD--IVLSGEEFKESKPNPEIYLTALKQLNVQAS  163 (214)
T ss_dssp             HHHBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCS--EEEEGGGCSSCTTSSHHHHHHHHHHTCCGG
T ss_pred             CCCcCchHHHHHHHHHHCCCCEEEEeCCcH-HHHHHHHHHcCcHhhee--eEeecccccCCCCChHHHHHHHHHcCCChH
Confidence            357899999999999999999999999999 89999999999999999  665542       23459999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      +|++|||+.+|+.+|+++|+.++++.++
T Consensus       164 ~~~~iGD~~~Di~~a~~aG~~~~~~~~~  191 (214)
T 3e58_A          164 RALIIEDSEKGIAAGVAADVEVWAIRDN  191 (214)
T ss_dssp             GEEEEECSHHHHHHHHHTTCEEEEECCS
T ss_pred             HeEEEeccHhhHHHHHHCCCEEEEECCC
Confidence            9999999999999999999999999764

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.63  E-value=6.3e-17  Score=130.41  Aligned_cols=99  Identities=10%  Similarity=0.138  Sum_probs=81.6

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCC---------------CchHHHHHHHhhcCcccccccccee-c-----C--
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRT---------------SEIQGAQQLLDLFNWNQYFDHKQIF-P-----G--   64 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~---------------~~~~~~~~~l~~~~l~~~fd~~~i~-~-----~--   64 (280)
                      ...++++||+.++|+.|+++|++++|+||+               +. ..++..++.+++.  |+  .++ +     .  
T Consensus        38 ~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gl~--fd--~v~~s~~~~~~~~  112 (176)
T 2fpr_A           38 FDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPH-NLMMQIFTSQGVQ--FD--EVLICPHLPADEC  112 (176)
T ss_dssp             GGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHH-HHHHHHHHHTTCC--EE--EEEEECCCGGGCC
T ss_pred             HHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhH-HHHHHHHHHcCCC--ee--EEEEcCCCCcccc
Confidence            345789999999999999999999999999               45 6788899999986  88  553 2     1  


Q ss_pred             ----CChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          65 ----QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        65 ----~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                          +++..|+.+++++|++|++|+||||+..|+++|+++|+.++++.++.
T Consensus       113 ~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~  163 (176)
T 2fpr_A          113 DCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  163 (176)
T ss_dssp             SSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             cccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence                23345999999999999999999999999999999999999997764

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.62  E-value=9.6e-17  Score=137.25  Aligned_cols=206  Identities=12%  Similarity=0.120  Sum_probs=137.5

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHH---HhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQL---LDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~---l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~   88 (280)
                      .++|++.+.|+.|+++|++++++||.+. ...+.+   ++.+|+....+  .++++..  .....+++. .+...+.++|
T Consensus        17 ~~~~~~~~~l~~l~~~g~~~~~~T~r~~-~~~~~~~~~l~~lg~~~~~~--~i~~~~~--~~~~~l~~~-~~~~~v~viG   90 (263)
T 1zjj_A           17 RAIPGVRELIEFLKERGIPFAFLTNNST-KTPEMYREKLLKMGIDVSSS--IIITSGL--ATRLYMSKH-LDPGKIFVIG   90 (263)
T ss_dssp             EECTTHHHHHHHHHHHTCCEEEEESCCS-SCHHHHHHHHHTTTCCCCGG--GEEEHHH--HHHHHHHHH-SCCCCEEEES
T ss_pred             EeCccHHHHHHHHHHCCCeEEEEeCCCC-CCHHHHHHHHHHCCCCCChh--hEEecHH--HHHHHHHHh-CCCCEEEEEc
Confidence            3569999999999999999999999875 444443   44567755555  5555432  233333433 2346788888


Q ss_pred             CCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCC
Q psy8911          89 DEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYR  168 (280)
Q Consensus        89 D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (280)
                      .. ...+.+++.|+..+..    ..+. .   ..+.-+..+..                           .. ....+||
T Consensus        91 ~~-~l~~~l~~~G~~~~~~----~~~~-~---~~~~~~~~v~~---------------------------g~-~~~~~~~  133 (263)
T 1zjj_A           91 GE-GLVKEMQALGWGIVTL----DEAR-Q---GSWKEVKHVVV---------------------------GL-DPDLTYE  133 (263)
T ss_dssp             CH-HHHHHHHHHTSCBCCH----HHHH-T---TGGGGCCEEEE---------------------------CC-CTTCBHH
T ss_pred             CH-HHHHHHHHcCCeeccC----Cccc-c---cccCCCCEEEE---------------------------ec-CCCCCHH
Confidence            74 3355566677754311    0000 0   00000111111                           11 2345889


Q ss_pred             CHHHHHHHHhhCCcEEEEEcCCCcHHHH--HHHHhh-CCCccccccce-----EecCCCHHHHHHHHHHcCCCCCcEEEE
Q psy8911         169 GVPEILRYLKENKCLVAAASRTSEILHA--KQILNL-INLNQYFSNKE-----IYPGPKTTHFESLKKATGIEYKDMVFF  240 (280)
Q Consensus       169 g~~~~L~~L~~~g~~~~i~T~~~~~~~~--~~~l~~-~gl~~~f~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~l~i  240 (280)
                      ++.++|+.|+ +|+++ |+||+ .....  ...+.. .++..+|+.+.     ...+|++..|+.++++  ++|++++||
T Consensus       134 ~~~~~l~~L~-~g~~~-i~tn~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~~~V  208 (263)
T 1zjj_A          134 KLKYATLAIR-NGATF-IGTNP-DATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEELWMV  208 (263)
T ss_dssp             HHHHHHHHHH-TTCEE-EESCC-CSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEEEEE
T ss_pred             HHHHHHHHHH-CCCEE-EEECC-CccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccEEEE
Confidence            9999999999 89999 99999 54332  223444 55667777532     2346888999999999  999999999


Q ss_pred             eCCc-CCcccccccCceEEEECCCCC
Q psy8911         241 DDEE-RNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       241 gD~~-~di~~a~~aG~~~i~v~~g~~  265 (280)
                      ||++ +|+.+|+++|+.+++|.+|..
T Consensus       209 GD~~~~Di~~A~~aG~~~i~v~~g~~  234 (263)
T 1zjj_A          209 GDRLDTDIAFAKKFGMKAIMVLTGVS  234 (263)
T ss_dssp             ESCTTTHHHHHHHTTCEEEEESSSSC
T ss_pred             CCChHHHHHHHHHcCCeEEEECCCCC
Confidence            9996 999999999999999998865

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.62  E-value=7e-16  Score=128.37  Aligned_cols=101  Identities=18%  Similarity=0.203  Sum_probs=90.3

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCC
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGI   79 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~   79 (280)
                      ......++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|+  .+++++       +...|+.+++++|+
T Consensus        98 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~--~i~~~~~~~~~Kp~~~~~~~~~~~lgi  174 (231)
T 3kzx_A           98 KSDNFMLNDGAIELLDTLKENNITMAIVSNKNG-ERLRSEIHHKNLTHYFD--SIIGSGDTGTIKPSPEPVLAALTNINI  174 (231)
T ss_dssp             SCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCGGGCS--EEEEETSSSCCTTSSHHHHHHHHHHTC
T ss_pred             ccccceECcCHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHHHCCchhhee--eEEcccccCCCCCChHHHHHHHHHcCC
Confidence            456789999999999999999999999999999 88999999999999999  666543       23459999999999


Q ss_pred             CCc-cEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          80 EYK-DMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        80 ~p~-~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      +|+ +|++|||+.+|+++|+++|+.++++.++
T Consensus       175 ~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~  206 (231)
T 3kzx_A          175 EPSKEVFFIGDSISDIQSAIEAGCLPIKYGST  206 (231)
T ss_dssp             CCSTTEEEEESSHHHHHHHHHTTCEEEEECC-
T ss_pred             CcccCEEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence            999 9999999999999999999999999554

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.62  E-value=7.9e-17  Score=142.69  Aligned_cols=97  Identities=18%  Similarity=0.148  Sum_probs=85.9

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce-E--------------ecCCCHHHHHHH
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE-I--------------YPGPKTTHFESL  226 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~-~--------------~~~~k~~~~~~~  226 (280)
                      ..+.++||+.++|+.|+++|++++|+||+ ....++..++++|+..+|+... +              ..+||++.|..+
T Consensus       175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~-~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~  253 (335)
T 3n28_A          175 ETLPLMPELPELVATLHAFGWKVAIASGG-FTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL  253 (335)
T ss_dssp             TTCCCCTTHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred             HhCCcCcCHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence            34679999999999999999999999999 8999999999999998887421 1              113778899999


Q ss_pred             HHHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         227 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       227 ~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      ++++|++|++|+||||+.+|+.+++++|+.++.
T Consensus       254 ~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~  286 (335)
T 3n28_A          254 AQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY  286 (335)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999999998776

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.62  E-value=2.5e-16  Score=128.33  Aligned_cols=100  Identities=10%  Similarity=0.085  Sum_probs=90.6

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcEE
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      ..++||+.++|+.|+++| +++|+||+ ....++..++.+|+.++|+.+...     .+|+++.|..+++++|++|++|+
T Consensus        85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~-~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  162 (200)
T 3cnh_A           85 SQPRPEVLALARDLGQRY-RMYSLNNE-GRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV  162 (200)
T ss_dssp             CCBCHHHHHHHHHHTTTS-EEEEEECC-CHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CccCccHHHHHHHHHHcC-CEEEEeCC-cHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            458999999999999999 99999999 888899999999999999975443     24778899999999999999999


Q ss_pred             EEeCCcCCcccccccCceEEEECCCCC
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      ||||+.+|+++|+++|+.+++|.++..
T Consensus       163 ~vgD~~~Di~~a~~aG~~~~~~~~~~~  189 (200)
T 3cnh_A          163 MVDDRLQNVQAARAVGMHAVQCVDAAQ  189 (200)
T ss_dssp             EEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred             EeCCCHHHHHHHHHCCCEEEEECCchh
Confidence            999999999999999999999987643

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.62  E-value=6.2e-16  Score=131.96  Aligned_cols=100  Identities=16%  Similarity=0.139  Sum_probs=90.2

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+++|++++|+||+ ... +...++.+|+.++|+.+...     .+|++..|..+++++|++|++|
T Consensus       104 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~-~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~  181 (263)
T 3k1z_A          104 TWQVLDGAEDTLRECRTRGLRLAVISNF-DRR-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVA  181 (263)
T ss_dssp             GEEECTTHHHHHHHHHHTTCEEEEEESC-CTT-HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGE
T ss_pred             cceECcCHHHHHHHHHhCCCcEEEEeCC-cHH-HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence            4679999999999999999999999998 554 68899999999999976543     3478899999999999999999


Q ss_pred             EEEeCCc-CCcccccccCceEEEECCCC
Q psy8911         238 VFFDDEE-RNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       238 l~igD~~-~di~~a~~aG~~~i~v~~g~  264 (280)
                      +||||+. +|+++|+++|+.++++.++.
T Consensus       182 ~~vGD~~~~Di~~a~~aG~~~i~~~~~~  209 (263)
T 3k1z_A          182 AHVGDNYLCDYQGPRAVGMHSFLVVGPQ  209 (263)
T ss_dssp             EEEESCHHHHTHHHHTTTCEEEEECCSS
T ss_pred             EEECCCcHHHHHHHHHCCCEEEEEcCCC
Confidence            9999997 99999999999999998765

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.62  E-value=8.9e-16  Score=122.68  Aligned_cols=116  Identities=17%  Similarity=0.190  Sum_probs=88.2

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHH--HHHHHHhhCCcEEEEEcCCCcHHHHHHHHh-
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVP--EILRYLKENKCLVAAASRTSEILHAKQILN-  201 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~-  201 (280)
                      ..++++||+||||++.....             ...+..+..| .++  ..|+.|+++|++++|+||+   ..++..++ 
T Consensus         8 ~ikliv~D~DGtL~d~~~~~-------------~~~g~~~~~f-~~~D~~~L~~Lk~~Gi~~~I~Tg~---~~~~~~l~~   70 (168)
T 3ewi_A            8 EIKLLVCNIDGCLTNGHIYV-------------SGDQKEIISY-DVKDAIGISLLKKSGIEVRLISER---ACSKQTLSA   70 (168)
T ss_dssp             CCCEEEEECCCCCSCSCCBC-------------CSSCCCEEEE-EHHHHHHHHHHHHTTCEEEEECSS---CCCHHHHHT
T ss_pred             cCcEEEEeCccceECCcEEE-------------cCCCCEEEEE-ecCcHHHHHHHHHCCCEEEEEeCc---HHHHHHHHH
Confidence            46899999999999843221             1112222222 111  2689999999999999998   35677888 


Q ss_pred             -hCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         202 -LINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       202 -~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                       .+++. +|..    ..+|+..+..+++++|++|++++||||+.+|+.+++++|+.++ +.++
T Consensus        71 l~lgi~-~~~g----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a-~~na  127 (168)
T 3ewi_A           71 LKLDCK-TEVS----VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAV-PADA  127 (168)
T ss_dssp             TCCCCC-EECS----CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEE-CTTC
T ss_pred             hCCCcE-EEEC----CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEE-eCCh
Confidence             77887 6542    3688899999999999999999999999999999999999854 5444

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.62  E-value=1.5e-15  Score=124.43  Aligned_cols=100  Identities=14%  Similarity=0.143  Sum_probs=90.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc--cccceecCC------ChhHHHHHHHHhCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF--DHKQIFPGQ------KTTHFANLKKATGIE   80 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f--d~~~i~~~~------~~~~~~~~~~~~g~~   80 (280)
                      ....++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|  +  .+++++      +...|+.+++++|++
T Consensus        67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~~~--~i~~~~~~~~kp~~~~~~~~~~~~g~~  143 (205)
T 3m9l_A           67 QGSRPAPGAVELVRELAGRGYRLGILTRNAR-ELAHVTLEAIGLADCFAEA--DVLGRDEAPPKPHPGGLLKLAEAWDVS  143 (205)
T ss_dssp             EEEEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGSCGG--GEECTTTSCCTTSSHHHHHHHHHTTCC
T ss_pred             hcCCCCccHHHHHHHHHhcCCeEEEEeCCch-HHHHHHHHHcCchhhcCcc--eEEeCCCCCCCCCHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999 8999999999999999  6  565542      234599999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|++|||+.+|+++|+++|+.+|++.++.
T Consensus       144 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~  174 (205)
T 3m9l_A          144 PSRMVMVGDYRFDLDCGRAAGTRTVLVNLPD  174 (205)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEECSSSS
T ss_pred             HHHEEEECCCHHHHHHHHHcCCEEEEEeCCC
Confidence            9999999999999999999999999997764

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.62  E-value=5.9e-16  Score=129.78  Aligned_cols=100  Identities=12%  Similarity=0.184  Sum_probs=86.3

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc--cccceecCC-------ChhHHHHHHHHhCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF--DHKQIFPGQ-------KTTHFANLKKATGI   79 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f--d~~~i~~~~-------~~~~~~~~~~~~g~   79 (280)
                      ....++||+.++|+.|+++|++++++||++. ...+..++. ++.++|  +  .+++++       +...|+.+++++|+
T Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~-~l~~~f~~~--~~~~~~~~~~~kp~~~~~~~~~~~lg~  180 (247)
T 3dv9_A          105 PKAERMPGALEVLTKIKSEGLTPMVVTGSGQ-TSLLDRLNH-NFPGIFQAN--LMVTAFDVKYGKPNPEPYLMALKKGGF  180 (247)
T ss_dssp             CCCCBCTTHHHHHHHHHHTTCEEEEECSCC----CHHHHHH-HSTTTCCGG--GEECGGGCSSCTTSSHHHHHHHHHHTC
T ss_pred             ccCCCCCCHHHHHHHHHHcCCcEEEEcCCch-HHHHHHHHh-hHHHhcCCC--eEEecccCCCCCCCCHHHHHHHHHcCC
Confidence            3478999999999999999999999999998 778888888 999999  7  565543       33449999999999


Q ss_pred             CCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|++|++|||+.+|+++|+++|+.++++.++..
T Consensus       181 ~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~  213 (247)
T 3dv9_A          181 KPNEALVIENAPLGVQAGVAAGIFTIAVNTGPL  213 (247)
T ss_dssp             CGGGEEEEECSHHHHHHHHHTTSEEEEECCSSS
T ss_pred             ChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCC
Confidence            999999999999999999999999999987654

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.62  E-value=3.9e-16  Score=133.01  Aligned_cols=94  Identities=20%  Similarity=0.304  Sum_probs=79.4

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc--C---------c----cccccccceecC--CChhHHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF--N---------W----NQYFDHKQIFPG--QKTTHFA   71 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~--~---------l----~~~fd~~~i~~~--~~~~~~~   71 (280)
                      ..+++|||+.++|+.    |++++|+||++. ..++..++.+  +         +    ..+|+  .++++  +++..|+
T Consensus       122 ~~~~~~pgv~e~L~~----g~~l~i~Tn~~~-~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~--~~~~g~KP~p~~~~  194 (253)
T 2g80_A          122 IKAPVYADAIDFIKR----KKRVFIYSSGSV-KAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFD--INTSGKKTETQSYA  194 (253)
T ss_dssp             CCBCCCHHHHHHHHH----CSCEEEECSSCH-HHHHHHHHSBCCTTCTTSCCBCCGGGCCEEEC--HHHHCCTTCHHHHH
T ss_pred             ccCCCCCCHHHHHHc----CCEEEEEeCCCH-HHHHHHHHhhcccccccccccchHhhcceEEe--eeccCCCCCHHHHH
Confidence            357899999999988    999999999999 8888888877  5         4    44555  33323  3445599


Q ss_pred             HHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          72 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        72 ~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      .+++++|++|++|+||||+..|+++|+++||+++++.+
T Consensus       195 ~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~  232 (253)
T 2g80_A          195 NILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR  232 (253)
T ss_dssp             HHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred             HHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence            99999999999999999999999999999999999965

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.62  E-value=7.7e-16  Score=129.33  Aligned_cols=100  Identities=13%  Similarity=0.187  Sum_probs=89.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc--cccceecCCC-------hhHHHHHHHHhCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF--DHKQIFPGQK-------TTHFANLKKATGI   79 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f--d~~~i~~~~~-------~~~~~~~~~~~g~   79 (280)
                      ....++||+.++|+.|+++|++++++||++. ...+..++. ++.++|  +  .+++++.       ...|+.+++++|+
T Consensus       106 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~-~l~~~f~~d--~i~~~~~~~~~kp~~~~~~~~~~~lg~  181 (243)
T 3qxg_A          106 PEAERMPGAWELLQKVKSEGLTPMVVTGSGQ-LSLLERLEH-NFPGMFHKE--LMVTAFDVKYGKPNPEPYLMALKKGGL  181 (243)
T ss_dssp             SCCCBCTTHHHHHHHHHHTTCEEEEECCCCC-HHHHTTHHH-HSTTTCCGG--GEECTTTCSSCTTSSHHHHHHHHHTTC
T ss_pred             ccCCCCCCHHHHHHHHHHcCCcEEEEeCCcH-HHHHHHHHH-hHHHhcCcc--eEEeHHhCCCCCCChHHHHHHHHHcCC
Confidence            3468999999999999999999999999998 788888888 999999  7  6666533       3349999999999


Q ss_pred             CCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|++|++|||+.+|+++|+++|+.++++.++..
T Consensus       182 ~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~  214 (243)
T 3qxg_A          182 KADEAVVIENAPLGVEAGHKAGIFTIAVNTGPL  214 (243)
T ss_dssp             CGGGEEEEECSHHHHHHHHHTTCEEEEECCSSS
T ss_pred             CHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCC
Confidence            999999999999999999999999999987654

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.61  E-value=7.7e-16  Score=129.00  Aligned_cols=101  Identities=18%  Similarity=0.268  Sum_probs=90.7

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCC-
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIE-   80 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~-   80 (280)
                      ....++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|+  .+++++.       ...|+.+++++|++ 
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~g~~~  183 (240)
T 3sd7_A          107 FENKIYENMKEILEMLYKNGKILLVATSKPT-VFAETILRYFDIDRYFK--YIAGSNLDGTRVNKNEVIQYVLDLCNVKD  183 (240)
T ss_dssp             GCCEECTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCGGGCS--EEEEECTTSCCCCHHHHHHHHHHHHTCCC
T ss_pred             cccccCccHHHHHHHHHHCCCeEEEEeCCcH-HHHHHHHHHcCcHhhEE--EEEeccccCCCCCCHHHHHHHHHHcCCCC
Confidence            3478999999999999999999999999999 89999999999999999  6665532       23399999999999 


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      |++|++|||+.+|+++|+++|+.++++..+..
T Consensus       184 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~  215 (240)
T 3sd7_A          184 KDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYG  215 (240)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESSSSC
T ss_pred             CCcEEEECCCHHHHHHHHHCCCCEEEEeCCCC
Confidence            99999999999999999999999999986643

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.61  E-value=2.2e-15  Score=125.02  Aligned_cols=98  Identities=13%  Similarity=0.222  Sum_probs=89.6

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCc---HHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSE---ILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~---~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      .++|++.++|+.|+++|++++++||+ .   ...++..++.+|+.++|+.+...     .+|++..|..+++++|++|++
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~  177 (235)
T 2om6_A           99 LVLEGTKEALQFVKERGLKTAVIGNV-MFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEE  177 (235)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEEEECC-CSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGG
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCC-cccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccc
Confidence            46999999999999999999999999 7   78888999999999999976443     247889999999999999999


Q ss_pred             EEEEeCCc-CCcccccccCceEEEECCC
Q psy8911         237 MVFFDDEE-RNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       237 ~l~igD~~-~di~~a~~aG~~~i~v~~g  263 (280)
                      |++|||+. +|+++|+++|+.+++++++
T Consensus       178 ~~~iGD~~~nDi~~a~~aG~~~~~~~~~  205 (235)
T 2om6_A          178 SLHIGDTYAEDYQGARKVGMWAVWINQE  205 (235)
T ss_dssp             EEEEESCTTTTHHHHHHTTSEEEEECTT
T ss_pred             eEEECCChHHHHHHHHHCCCEEEEECCC
Confidence            99999999 9999999999999999876

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.61  E-value=1.1e-15  Score=127.24  Aligned_cols=95  Identities=19%  Similarity=0.235  Sum_probs=82.9

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCCcc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEYKD   83 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p~~   83 (280)
                      ..++||+.++|+.|+++|++++|+||++.   .+..++.+++.++|+  .+++++.+       ..|+.+++++|++|++
T Consensus        91 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~l~~~gl~~~f~--~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~  165 (233)
T 3nas_A           91 EDLLPGIGRLLCQLKNENIKIGLASSSRN---APKILRRLAIIDDFH--AIVDPTTLAKGKPDPDIFLTAAAMLDVSPAD  165 (233)
T ss_dssp             GGSCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCTTTCS--EECCC---------CCHHHHHHHHHTSCGGG
T ss_pred             CCcCcCHHHHHHHHHHCCCcEEEEcCchh---HHHHHHHcCcHhhcC--EEeeHhhCCCCCCChHHHHHHHHHcCCCHHH
Confidence            45899999999999999999999999865   788999999999999  77765433       2399999999999999


Q ss_pred             EEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      |++|||+.+|+++|+++|+.++++...
T Consensus       166 ~i~vGDs~~Di~~a~~aG~~~~~~~~~  192 (233)
T 3nas_A          166 CAAIEDAEAGISAIKSAGMFAVGVGQG  192 (233)
T ss_dssp             EEEEECSHHHHHHHHHTTCEEEECC--
T ss_pred             EEEEeCCHHHHHHHHHcCCEEEEECCc
Confidence            999999999999999999999999543

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.60  E-value=9.1e-16  Score=130.95  Aligned_cols=98  Identities=12%  Similarity=0.134  Sum_probs=87.5

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p~   82 (280)
                      .+.++||+.++|+.|+++|++++|+||++. . ++..++.+|+.++|+  .++++       ++...|+.+++++|++|+
T Consensus       104 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~-~~~~l~~~gl~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~  179 (263)
T 3k1z_A          104 TWQVLDGAEDTLRECRTRGLRLAVISNFDR-R-LEGILGGLGLREHFD--FVLTSEAAGWPKPDPRIFQEALRLAHMEPV  179 (263)
T ss_dssp             GEEECTTHHHHHHHHHHTTCEEEEEESCCT-T-HHHHHHHTTCGGGCS--CEEEHHHHSSCTTSHHHHHHHHHHHTCCGG
T ss_pred             cceECcCHHHHHHHHHhCCCcEEEEeCCcH-H-HHHHHHhCCcHHhhh--EEEeecccCCCCCCHHHHHHHHHHcCCCHH
Confidence            468999999999999999999999999887 4 689999999999999  66554       233459999999999999


Q ss_pred             cEEEEeCCc-ccccccccCCCeEEEEcCCC
Q psy8911          83 DMVFFDDEE-RNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        83 ~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +|+||||+. +|+++|+++|+.++++.++.
T Consensus       180 ~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~  209 (263)
T 3k1z_A          180 VAAHVGDNYLCDYQGPRAVGMHSFLVVGPQ  209 (263)
T ss_dssp             GEEEEESCHHHHTHHHHTTTCEEEEECCSS
T ss_pred             HEEEECCCcHHHHHHHHHCCCEEEEEcCCC
Confidence            999999997 99999999999999997764

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.60  E-value=1.1e-15  Score=127.18  Aligned_cols=103  Identities=20%  Similarity=0.262  Sum_probs=89.8

Q ss_pred             ceeccCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC------CCHHHHHHHHHHcC--C
Q psy8911         162 TLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG------PKTTHFESLKKATG--I  232 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~------~k~~~~~~~~~~~~--~  232 (280)
                      ....++||+.++|+.|+++ |++++|+||+ ....++..++.+|+.++|+.+..+..      |++..|..+++++|  +
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~  168 (234)
T 2hcf_A           90 EDITLLEGVRELLDALSSRSDVLLGLLTGN-FEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANY  168 (234)
T ss_dssp             GGEEECTTHHHHHHHHHTCTTEEEEEECSS-CHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred             CCCCcCCCHHHHHHHHHhCCCceEEEEcCC-cHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCC
Confidence            3467899999999999999 9999999999 88889999999999999986433221      22356899999999  9


Q ss_pred             CCCcEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         233 EYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       233 ~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|++|++|||+.+|+++|+++|+.+++|.+|..
T Consensus       169 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~  201 (234)
T 2hcf_A          169 SPSQIVIIGDTEHDIRCARELDARSIAVATGNF  201 (234)
T ss_dssp             CGGGEEEEESSHHHHHHHHTTTCEEEEECCSSS
T ss_pred             CcccEEEECCCHHHHHHHHHCCCcEEEEcCCCC
Confidence            999999999999999999999999999998754

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.60  E-value=1.2e-15  Score=127.12  Aligned_cols=100  Identities=14%  Similarity=0.170  Sum_probs=89.0

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ....++||+.++|+.|+ +|++++|+||++. ...+..++.+++.++|+  .+++++       +...|+.+++++|++|
T Consensus       104 ~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~lgi~~  179 (240)
T 3qnm_A          104 TKSGLMPHAKEVLEYLA-PQYNLYILSNGFR-ELQSRKMRSAGVDRYFK--KIILSEDLGVLKPRPEIFHFALSATQSEL  179 (240)
T ss_dssp             GCCCBSTTHHHHHHHHT-TTSEEEEEECSCH-HHHHHHHHHHTCGGGCS--EEEEGGGTTCCTTSHHHHHHHHHHTTCCG
T ss_pred             hcCCcCccHHHHHHHHH-cCCeEEEEeCCch-HHHHHHHHHcChHhhce--eEEEeccCCCCCCCHHHHHHHHHHcCCCc
Confidence            45789999999999999 9999999999999 88999999999999999  666542       2334999999999999


Q ss_pred             ccEEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911          82 KDMVFFDDEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        82 ~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|++|||+. +|+++|+++|+.++++..+..
T Consensus       180 ~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~  211 (240)
T 3qnm_A          180 RESLMIGDSWEADITGAHGVGMHQAFYNVTER  211 (240)
T ss_dssp             GGEEEEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred             ccEEEECCCchHhHHHHHHcCCeEEEEcCCCC
Confidence            9999999995 999999999999999977653

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.60  E-value=2.3e-15  Score=125.06  Aligned_cols=101  Identities=19%  Similarity=0.240  Sum_probs=89.0

Q ss_pred             CcceecCCHHHHHHHHHHC-CceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh--------hHHHHHHHHhC-
Q psy8911           9 AHIKYYPDVPGILKYLKQN-NCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT--------THFANLKKATG-   78 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~-g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~--------~~~~~~~~~~g-   78 (280)
                      ....++||+.++|+.|+++ |++++|+||++. ...+..++.+++.++|+  .++.+.+.        ..|+.+++++| 
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~~k~~~~~~~~~~~~lg~  166 (234)
T 2hcf_A           90 EDITLLEGVRELLDALSSRSDVLLGLLTGNFE-ASGRHKLKLPGIDHYFP--FGAFADDALDRNELPHIALERARRMTGA  166 (234)
T ss_dssp             GGEEECTTHHHHHHHHHTCTTEEEEEECSSCH-HHHHHHHHTTTCSTTCS--CEECTTTCSSGGGHHHHHHHHHHHHHCC
T ss_pred             CCCCcCCCHHHHHHHHHhCCCceEEEEcCCcH-HHHHHHHHHCCchhhcC--cceecCCCcCccchHHHHHHHHHHHhCC
Confidence            4578999999999999999 999999999999 88999999999999999  54443221        12899999999 


Q ss_pred             -CCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          79 -IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        79 -~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                       ++|++|++|||+.+|+++|+++|+.++++.++..
T Consensus       167 ~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~  201 (234)
T 2hcf_A          167 NYSPSQIVIIGDTEHDIRCARELDARSIAVATGNF  201 (234)
T ss_dssp             CCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSS
T ss_pred             CCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCC
Confidence             9999999999999999999999999999987643

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.60  E-value=8.9e-16  Score=130.87  Aligned_cols=99  Identities=9%  Similarity=-0.047  Sum_probs=89.3

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc-ccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY-FDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~-fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ...++||+.++|+.|+++|++++|+||++. ...+..++.+++.++ |+  .+++++       +...|+.+++++|++|
T Consensus       109 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~kp~~~~~~~~~~~lgi~~  185 (277)
T 3iru_A          109 RSQLIPGWKEVFDKLIAQGIKVGGNTGYGP-GMMAPALIAAKEQGYTPA--STVFATDVVRGRPFPDMALKVALELEVGH  185 (277)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHHHTTCCCS--EEECGGGSSSCTTSSHHHHHHHHHHTCSC
T ss_pred             cCccCcCHHHHHHHHHHcCCeEEEEeCCch-HHHHHHHHhcCcccCCCc--eEecHHhcCCCCCCHHHHHHHHHHcCCCC
Confidence            368899999999999999999999999999 889999999999998 88  665542       3345999999999999


Q ss_pred             -ccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          82 -KDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        82 -~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                       ++|++|||+.+|+++|+++|+.+++|.++.
T Consensus       186 ~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~  216 (277)
T 3iru_A          186 VNGCIKVDDTLPGIEEGLRAGMWTVGVSCSG  216 (277)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEEECSSS
T ss_pred             CccEEEEcCCHHHHHHHHHCCCeEEEEecCC
Confidence             999999999999999999999999998774

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.60  E-value=1e-15  Score=129.79  Aligned_cols=99  Identities=12%  Similarity=0.068  Sum_probs=89.7

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc-eecCCC--------hhHHHHHHHHhCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ-IFPGQK--------TTHFANLKKATGI   79 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~-i~~~~~--------~~~~~~~~~~~g~   79 (280)
                      ....++||+.++|+.|+++|++++|+||++. ..++..++.+++.++|+  . +++++.        ...|+.+++++|+
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~l~~~~l~~~f~--~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi  183 (259)
T 4eek_A          107 TGVTAIEGAAETLRALRAAGVPFAIGSNSER-GRLHLKLRVAGLTELAG--EHIYDPSWVGGRGKPHPDLYTFAAQQLGI  183 (259)
T ss_dssp             TTCEECTTHHHHHHHHHHHTCCEEEECSSCH-HHHHHHHHHTTCHHHHC--SCEECGGGGTTCCTTSSHHHHHHHHHTTC
T ss_pred             ccCCcCccHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHhcChHhhcc--ceEEeHhhcCcCCCCChHHHHHHHHHcCC
Confidence            5678999999999999999999999999999 89999999999999999  5 554432        3349999999999


Q ss_pred             CCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      +|++|++|||+.+|+++|+++|+.++++.++
T Consensus       184 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g  214 (259)
T 4eek_A          184 LPERCVVIEDSVTGGAAGLAAGATLWGLLVP  214 (259)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEECCT
T ss_pred             CHHHEEEEcCCHHHHHHHHHCCCEEEEEccC
Confidence            9999999999999999999999999999765

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.59  E-value=2.1e-15  Score=125.11  Aligned_cols=96  Identities=21%  Similarity=0.181  Sum_probs=82.8

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+++|++++|+||+ .. .++..++++|+.++|+.+...     .+|+++.|..+++++|++|   
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~-~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---  167 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNA-SP-RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA---  167 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSC-HH-HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCC-cH-HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence            5689999999999999999999999999 66 478899999999999975433     2466788999999999999   


Q ss_pred             EEEeCCcC-CcccccccCceEEEECCC
Q psy8911         238 VFFDDEER-NSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       238 l~igD~~~-di~~a~~aG~~~i~v~~g  263 (280)
                      +||||+.. |+.+|+++|+.+++|.++
T Consensus       168 ~~vgD~~~~Di~~a~~aG~~~i~v~~~  194 (220)
T 2zg6_A          168 VHVGDIYELDYIGAKRSYVDPILLDRY  194 (220)
T ss_dssp             EEEESSCCCCCCCSSSCSEEEEEBCTT
T ss_pred             EEEcCCchHhHHHHHHCCCeEEEECCC
Confidence            99999999 999999999999999753

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.59  E-value=3.6e-16  Score=127.35  Aligned_cols=99  Identities=12%  Similarity=0.194  Sum_probs=88.3

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p~   82 (280)
                      ...++||+.++|+.|+++| +++|+||++. ...+..++.+++.++|+  .++++       ++...|+.+++++|++|+
T Consensus        84 ~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~-~~~~~~l~~~~~~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~  159 (200)
T 3cnh_A           84 QSQPRPEVLALARDLGQRY-RMYSLNNEGR-DLNEYRIRTFGLGEFLL--AFFTSSALGVMKPNPAMYRLGLTLAQVRPE  159 (200)
T ss_dssp             TCCBCHHHHHHHHHHTTTS-EEEEEECCCH-HHHHHHHHHHTGGGTCS--CEEEHHHHSCCTTCHHHHHHHHHHHTCCGG
T ss_pred             cCccCccHHHHHHHHHHcC-CEEEEeCCcH-HHHHHHHHhCCHHHhcc--eEEeecccCCCCCCHHHHHHHHHHcCCCHH
Confidence            3568999999999999999 9999999999 88999999999999999  55543       234459999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|+||||+.+|+++|+++|+.++++.++..
T Consensus       160 ~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~  189 (200)
T 3cnh_A          160 EAVMVDDRLQNVQAARAVGMHAVQCVDAAQ  189 (200)
T ss_dssp             GEEEEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred             HeEEeCCCHHHHHHHHHCCCEEEEECCchh
Confidence            999999999999999999999999977654

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.59  E-value=4.8e-15  Score=125.15  Aligned_cols=101  Identities=11%  Similarity=0.109  Sum_probs=89.4

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC--CChhHHHHHHHHhCCCCccEE
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG--QKTTHFANLKKATGIEYKDMV   85 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~--~~~~~~~~~~~~~g~~p~~~l   85 (280)
                      ...+.++||+.++|+.|+ +|++++|+||++. ...+..++.+++.++|+  .++++  ++...|+.+++++|++|++|+
T Consensus       108 ~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~-~~~~~~l~~~~l~~~f~--~i~~~~kp~~~~~~~~~~~l~~~~~~~i  183 (251)
T 2pke_A          108 QHPVEVIAGVREAVAAIA-ADYAVVLITKGDL-FHQEQKIEQSGLSDLFP--RIEVVSEKDPQTYARVLSEFDLPAERFV  183 (251)
T ss_dssp             TCCCCBCTTHHHHHHHHH-TTSEEEEEEESCH-HHHHHHHHHHSGGGTCC--CEEEESCCSHHHHHHHHHHHTCCGGGEE
T ss_pred             hccCCcCccHHHHHHHHH-CCCEEEEEeCCCH-HHHHHHHHHcCcHHhCc--eeeeeCCCCHHHHHHHHHHhCcCchhEE
Confidence            455789999999999999 9999999999999 88899999999999999  55544  345569999999999999999


Q ss_pred             EEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911          86 FFDDEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        86 ~v~D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|||+. +|+.+|+++|+.+++++++..
T Consensus       184 ~iGD~~~~Di~~a~~aG~~~~~v~~~~~  211 (251)
T 2pke_A          184 MIGNSLRSDVEPVLAIGGWGIYTPYAVT  211 (251)
T ss_dssp             EEESCCCCCCHHHHHTTCEEEECCCC--
T ss_pred             EECCCchhhHHHHHHCCCEEEEECCCCc
Confidence            999999 999999999999999977643

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.59  E-value=2.9e-15  Score=124.30  Aligned_cols=94  Identities=23%  Similarity=0.242  Sum_probs=81.6

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p~   82 (280)
                      .+.++||+.++|+.|+++|++++|+||++. . ++..++.+|+.++|+  .+++++++       ..|+.+++++|++| 
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~-~~~~l~~~gl~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-  167 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-R-VKTLLEKFDLKKYFD--ALALSYEIKAVKPNPKIFGFALAKVGYPA-  167 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHH-H-HHHHHHHHTCGGGCS--EEC-----------CCHHHHHHHHHCSSE-
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcH-H-HHHHHHhcCcHhHee--EEEeccccCCCCCCHHHHHHHHHHcCCCe-
Confidence            578999999999999999999999999977 4 788999999999999  77765433       23999999999999 


Q ss_pred             cEEEEeCCcc-cccccccCCCeEEEEcCC
Q psy8911          83 DMVFFDDEER-NSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        83 ~~l~v~D~~~-~i~aa~~~G~~~i~v~~~  110 (280)
                        +||||+.. |+.+|+++|+.++++.++
T Consensus       168 --~~vgD~~~~Di~~a~~aG~~~i~v~~~  194 (220)
T 2zg6_A          168 --VHVGDIYELDYIGAKRSYVDPILLDRY  194 (220)
T ss_dssp             --EEEESSCCCCCCCSSSCSEEEEEBCTT
T ss_pred             --EEEcCCchHhHHHHHHCCCeEEEECCC
Confidence              99999998 999999999999999654

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.59  E-value=1.1e-16  Score=130.91  Aligned_cols=142  Identities=13%  Similarity=0.046  Sum_probs=105.6

Q ss_pred             cceeEEEecCCCCCCccccccc-CcccccCCeeEc--cCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIGQKVMD--AKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN  201 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~  201 (280)
                      ..+++++|+|+||+.+...... +.+.  .....+  .+...+.++||+.++|+.|++. ++++|+|++ .+.+++.+++
T Consensus        27 ~k~~LVLDLD~TLvhs~~~~~~~~d~~--~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss-~~~~a~~vl~  102 (195)
T 2hhl_A           27 GKKCVVIDLDETLVHSSFKPISNADFI--VPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTAS-LAKYADPVAD  102 (195)
T ss_dssp             TCCEEEECCBTTTEEEESSCCTTCSEE--EEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSS-CHHHHHHHHH
T ss_pred             CCeEEEEccccceEcccccCCCCccce--eeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCC-CHHHHHHHHH
Confidence            4568999999999976422111 0000  000000  1122467899999999999998 999999999 9999999999


Q ss_pred             hCCCccccccceEecC--CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHHH
Q psy8911         202 LINLNQYFSNKEIYPG--PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQ  270 (280)
Q Consensus       202 ~~gl~~~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~  270 (280)
                      .+++..+|+.+...+.  ..++.|.+.++++|.++++||+|||++.++.++.++|+.+..+....+..++.
T Consensus       103 ~ld~~~~f~~~l~rd~~~~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~~~~~D~eL~  173 (195)
T 2hhl_A          103 LLDRWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELL  173 (195)
T ss_dssp             HHCCSSCEEEEECGGGCEEETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCSSCTTCCHHH
T ss_pred             HhCCcccEEEEEEcccceecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeecCCCChHHHH
Confidence            9999999987543322  12266888899999999999999999999999999999987776544434443

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.59  E-value=3.6e-16  Score=128.31  Aligned_cols=98  Identities=13%  Similarity=0.126  Sum_probs=77.9

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc--cccccceE-----------ecCCCHHH-HHHHHHH
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN--QYFSNKEI-----------YPGPKTTH-FESLKKA  229 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~--~~f~~~~~-----------~~~~k~~~-~~~~~~~  229 (280)
                      ..++||+.++|+.|+++|++++|+||+ ....++..++++|+.  .+|.....           ..+|.+.. +..+++.
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  159 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGG-LSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA  159 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCC-cHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence            358999999999999999999999999 899999999999994  45642111           12233433 4555566


Q ss_pred             cCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         230 TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       230 ~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +|++|++|++|||+.+|++++ ++|+.++++..+
T Consensus       160 ~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~  192 (219)
T 3kd3_A          160 KGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYM  192 (219)
T ss_dssp             GGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEEC
T ss_pred             hCCCCCCEEEEECCHhHHHHH-hCCCCcEEEecc
Confidence            799999999999999999998 689987777644

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.58  E-value=7.7e-16  Score=134.18  Aligned_cols=124  Identities=15%  Similarity=0.059  Sum_probs=94.3

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH---HHHHHhh-
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---AKQILNL-  202 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~---~~~~l~~-  202 (280)
                      +.+.+|.|||+.+.....   ++      -. .......+|||+.++|+.|+++|++++|+||+ ....   +...|++ 
T Consensus       160 ~~i~iD~dgtl~~~~~~~---~~------~~-~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k-~~~~~~~~~~~l~~~  228 (301)
T 1ltq_A          160 KAVIFDVDGTLAKMNGRG---PY------DL-EKCDTDVINPMVVELSKMYALMGYQIVVVSGR-ESGTKEDPTKYYRMT  228 (301)
T ss_dssp             EEEEEETBTTTBCCSSCC---TT------CG-GGGGGCCBCHHHHHHHHHHHHTTCEEEEEECS-CCCCSSSTTHHHHHH
T ss_pred             ceEEEeCCCCcccccCCC---ch------hh-hhccccCCChHHHHHHHHHHHCCCeEEEEeCC-CcccchhHHHHHHhc
Confidence            567799999986532111   00      00 12234678999999999999999999999999 5432   3556777 


Q ss_pred             -------CCCccccccceEec----CCCHHHHHHHHHHcCCCCCc-EEEEeCCcCCcccccccCceEEEECCC
Q psy8911         203 -------INLNQYFSNKEIYP----GPKTTHFESLKKATGIEYKD-MVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       203 -------~gl~~~f~~~~~~~----~~k~~~~~~~~~~~~~~~~~-~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                             +|+  +|+.+...+    +|+|+.+..++++++.++.+ |+||||+..|+++|+++||.++.|+||
T Consensus       229 ~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          229 RKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             ccccccccCC--CchheeeccCCCCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence                   899  477654322    35678899999999888755 799999999999999999999999998

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.58  E-value=1.2e-15  Score=125.00  Aligned_cols=99  Identities=11%  Similarity=0.204  Sum_probs=89.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-----C--hhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-----K--TTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-----~--~~~~~~~~~~~g~~p   81 (280)
                      ..+.++||+.++|+.|+++ ++++|+||++. ..++..++.+++.++|+  .+++++     |  ...|+.+++++|++|
T Consensus        80 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~KP~~~~~~~~~~~~~~~~  155 (209)
T 2hdo_A           80 DQIELYPGITSLFEQLPSE-LRLGIVTSQRR-NELESGMRSYPFMMRMA--VTISADDTPKRKPDPLPLLTALEKVNVAP  155 (209)
T ss_dssp             GGCEECTTHHHHHHHSCTT-SEEEEECSSCH-HHHHHHHTTSGGGGGEE--EEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred             ccCCcCCCHHHHHHHHHhc-CcEEEEeCCCH-HHHHHHHHHcChHhhcc--EEEecCcCCCCCCCcHHHHHHHHHcCCCc
Confidence            5678999999999999999 99999999999 88999999999999999  665542     3  445999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ++|++|||+.+|+.+|+++|+.++++.++.
T Consensus       156 ~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~  185 (209)
T 2hdo_A          156 QNALFIGDSVSDEQTAQAANVDFGLAVWGM  185 (209)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEEGGGC
T ss_pred             ccEEEECCChhhHHHHHHcCCeEEEEcCCC
Confidence            999999999999999999999999997554

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.58  E-value=7.5e-16  Score=134.61  Aligned_cols=209  Identities=13%  Similarity=0.121  Sum_probs=129.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCc--hHHHHHHHhhcCcc-ccccccceecCCChhHHHHHHHHhCCC-----Ccc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSE--IQGAQQLLDLFNWN-QYFDHKQIFPGQKTTHFANLKKATGIE-----YKD   83 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--~~~~~~~l~~~~l~-~~fd~~~i~~~~~~~~~~~~~~~~g~~-----p~~   83 (280)
                      .++|++.+.|+.|+++|++++++||++.  .......++.+++. -..+  .++++.... ...+.+  +++     ...
T Consensus        37 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~--~i~~~~~~~-~~~l~~--~~~~~~~~~~~  111 (306)
T 2oyc_A           37 RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAE--QLFSSALCA-ARLLRQ--RLPGPPDAPGA  111 (306)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGG--GEEEHHHHH-HHHHHH--HCCSCSSSCCE
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChh--hEEcHHHHH-HHHHHh--hCCccccCCCe
Confidence            6789999999999999999999998432  14455567777775 3344  454433221 112222  222     223


Q ss_pred             EEEEeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCC-CcccccccCcccccCCeeEccCCc
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLW-PLHVHDLVAPFKKIGQKVMDAKGT  162 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~-d~~~~~~~~~~~~~~~~~~~~~~~  162 (280)
                      +.++|... -.......|+..+....                        | .+. +...           ..+. ....
T Consensus       112 v~~~g~~~-l~~~l~~~g~~~~~~~~------------------------~-~~~~~~~~-----------~~v~-~~~~  153 (306)
T 2oyc_A          112 VFVLGGEG-LRAELRAAGLRLAGDPS------------------------A-GDGAAPRV-----------RAVL-VGYD  153 (306)
T ss_dssp             EEEESCHH-HHHHHHHTTCEETTSCC------------------------C-C---CCCE-----------EEEE-ECCC
T ss_pred             EEEECCHH-HHHHHHHCCCEeecccc------------------------c-ccccCCCC-----------CEEE-EeCC
Confidence            33333211 11122223322110000                        0 000 0000           0011 1112


Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHH--H-HHHhhCC-Cccccccc-----eEecCCCHHHHHHHHHHcCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHA--K-QILNLIN-LNQYFSNK-----EIYPGPKTTHFESLKKATGIE  233 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~--~-~~l~~~g-l~~~f~~~-----~~~~~~k~~~~~~~~~~~~~~  233 (280)
                      ...+||++.++|+.|+++|+ ++|+||+ .....  . ..++.+| +..+|+.+     ....+|++..|..+++++|++
T Consensus       154 ~~~~~~~~~~~l~~l~~~g~-~~i~tn~-~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~  231 (306)
T 2oyc_A          154 EHFSFAKLREACAHLRDPEC-LLVATDR-DPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSID  231 (306)
T ss_dssp             TTCCHHHHHHHHHHHTSTTS-EEEESCC-CCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCC
T ss_pred             CCCCHHHHHHHHHHHHcCCC-EEEEEcC-CccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCC
Confidence            34578999999999999999 9999999 44322  1 2344455 66677643     223468889999999999999


Q ss_pred             CCcEEEEeCCc-CCcccccccCceEEEECCCCC
Q psy8911         234 YKDMVFFDDEE-RNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       234 ~~~~l~igD~~-~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |++|+||||+. +|+++|+++|+.+++|.+|..
T Consensus       232 ~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~  264 (306)
T 2oyc_A          232 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVS  264 (306)
T ss_dssp             GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSC
T ss_pred             hHHEEEECCCchHHHHHHHHCCCeEEEECCCCC
Confidence            99999999996 999999999999999998875

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.57  E-value=2.1e-15  Score=127.17  Aligned_cols=102  Identities=15%  Similarity=0.213  Sum_probs=88.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh-cCccccccccceecCC--C-------hhHHHHHHHHhC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL-FNWNQYFDHKQIFPGQ--K-------TTHFANLKKATG   78 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~-~~l~~~fd~~~i~~~~--~-------~~~~~~~~~~~g   78 (280)
                      ....++||+.++|+.|+++|++++|+||++. ...+..+.. +++.++|+  .+++++  .       ...|+.+++++|
T Consensus       109 ~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~-~~~~~~l~~~~~l~~~f~--~~~~~~~~~~~~~Kp~~~~~~~~~~~lg  185 (250)
T 3l5k_A          109 PTAALMPGAEKLIIHLRKHGIPFALATSSRS-ASFDMKTSRHKEFFSLFS--HIVLGDDPEVQHGKPDPDIFLACAKRFS  185 (250)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCCEEEECSCCH-HHHHHHTTTCHHHHTTSS--CEECTTCTTCCSCTTSTHHHHHHHHTSS
T ss_pred             ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCH-HHHHHHHHhccCHHhhee--eEEecchhhccCCCCChHHHHHHHHHcC
Confidence            3578999999999999999999999999998 667776655 68999999  666555  2       234999999999


Q ss_pred             CCC--ccEEEEeCCcccccccccCCCeEEEEcCCCch
Q psy8911          79 IEY--KDMVFFDDEERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        79 ~~p--~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      ++|  ++|++|||+.+|+++|+++|+.++++..+...
T Consensus       186 i~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~  222 (250)
T 3l5k_A          186 PPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLS  222 (250)
T ss_dssp             SCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSC
T ss_pred             CCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCc
Confidence            998  99999999999999999999999999876543

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.57  E-value=4.7e-15  Score=123.20  Aligned_cols=100  Identities=24%  Similarity=0.371  Sum_probs=89.3

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p~   82 (280)
                      ...++||+.++|+.|+++ ++++++||++. ...+..++.+++.++|+  .++++       ++...|+.+++++|++|+
T Consensus        98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~~~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  173 (234)
T 3u26_A           98 YGELYPEVVEVLKSLKGK-YHVGMITDSDT-EQAMAFLDALGIKDLFD--SITTSEEAGFFKPHPRIFELALKKAGVKGE  173 (234)
T ss_dssp             HCCBCTTHHHHHHHHTTT-SEEEEEESSCH-HHHHHHHHHTTCGGGCS--EEEEHHHHTBCTTSHHHHHHHHHHHTCCGG
T ss_pred             hCCcCcCHHHHHHHHHhC-CcEEEEECCCH-HHHHHHHHHcCcHHHcc--eeEeccccCCCCcCHHHHHHHHHHcCCCch
Confidence            567999999999999999 99999999999 88999999999999999  66543       233449999999999999


Q ss_pred             cEEEEeCCc-ccccccccCCCeEEEEcCCCch
Q psy8911          83 DMVFFDDEE-RNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        83 ~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      +|++|||+. +|+++|+++|+.++++..+...
T Consensus       174 ~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~  205 (234)
T 3u26_A          174 EAVYVGDNPVKDCGGSKNLGMTSILLDRKGEK  205 (234)
T ss_dssp             GEEEEESCTTTTHHHHHTTTCEEEEECSSSTT
T ss_pred             hEEEEcCCcHHHHHHHHHcCCEEEEECCCCCc
Confidence            999999997 9999999999999999776443

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.57  E-value=3.7e-15  Score=124.01  Aligned_cols=98  Identities=9%  Similarity=0.078  Sum_probs=88.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhC-CC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATG-IE   80 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g-~~   80 (280)
                      ....++||+.++|+.|+++ ++++++||++. ...+..++.+++.++|+  .+++++       +...|+.+++++| ++
T Consensus       100 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~g~~~  175 (238)
T 3ed5_A          100 EGHQLIDGAFDLISNLQQQ-FDLYIVTNGVS-HTQYKRLRDSGLFPFFK--DIFVSEDTGFQKPMKEYFNYVFERIPQFS  175 (238)
T ss_dssp             TCCCBCTTHHHHHHHHHTT-SEEEEEECSCH-HHHHHHHHHTTCGGGCS--EEEEGGGTTSCTTCHHHHHHHHHTSTTCC
T ss_pred             hcCCCCccHHHHHHHHHhc-CeEEEEeCCCH-HHHHHHHHHcChHhhhh--eEEEecccCCCCCChHHHHHHHHHcCCCC
Confidence            4578999999999999999 99999999999 88999999999999999  665432       3344999999999 99


Q ss_pred             CccEEEEeCCc-ccccccccCCCeEEEEcCC
Q psy8911          81 YKDMVFFDDEE-RNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        81 p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~  110 (280)
                      |++|++|||+. +|+++|+++|+.++++.++
T Consensus       176 ~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~  206 (238)
T 3ed5_A          176 AEHTLIIGDSLTADIKGGQLAGLDTCWMNPD  206 (238)
T ss_dssp             GGGEEEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred             hhHeEEECCCcHHHHHHHHHCCCEEEEECCC
Confidence            99999999998 9999999999999999765

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.57  E-value=9.4e-16  Score=125.83  Aligned_cols=99  Identities=14%  Similarity=0.237  Sum_probs=88.0

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh------cCccccccccceecC-------CChhHHHHHHHHh
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL------FNWNQYFDHKQIFPG-------QKTTHFANLKKAT   77 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~------~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~   77 (280)
                      ..++||+.++|+.|++ |++++|+||++. ...+..++.      +++..+|+  .++++       ++...|+.+++++
T Consensus        88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~-~~~~~~~~~l~~~~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~  163 (211)
T 2i6x_A           88 EEISAEKFDYIDSLRP-DYRLFLLSNTNP-YVLDLAMSPRFLPSGRTLDSFFD--KVYASCQMGKYKPNEDIFLEMIADS  163 (211)
T ss_dssp             EEECHHHHHHHHHHTT-TSEEEEEECCCH-HHHHHHTSTTSSTTCCCGGGGSS--EEEEHHHHTCCTTSHHHHHHHHHHH
T ss_pred             cccChHHHHHHHHHHc-CCeEEEEeCCCH-HHHHHHHhhhccccccCHHHHcC--eEEeecccCCCCCCHHHHHHHHHHh
Confidence            5789999999999999 999999999999 888889998      89999999  66543       2344599999999


Q ss_pred             CCCCccEEEEeCCcccccccccCCCeEEEEcCCCch
Q psy8911          78 GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        78 g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      |++|++|++|||+.+|+.+|+++|+.++++.++...
T Consensus       164 ~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~  199 (211)
T 2i6x_A          164 GMKPEETLFIDDGPANVATAERLGFHTYCPDNGENW  199 (211)
T ss_dssp             CCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCC
T ss_pred             CCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHH
Confidence            999999999999999999999999999999776543

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.57  E-value=3.2e-15  Score=127.54  Aligned_cols=134  Identities=13%  Similarity=0.076  Sum_probs=92.3

Q ss_pred             cceeEEEecCCCCCCcccccc--c---CcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc---HHHH
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDL--V---APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE---ILHA  196 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~---~~~~  196 (280)
                      .+++++||+||||++......  .   .++.........  .....++||+.++|+.|+++|++++|+||+ .   ...+
T Consensus        58 ~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr-~~~~~~~~  134 (258)
T 2i33_A           58 KKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWIN--KAEAEALPGSIDFLKYTESKGVDIYYISNR-KTNQLDAT  134 (258)
T ss_dssp             SEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHH--HCCCEECTTHHHHHHHHHHTTCEEEEEEEE-EGGGHHHH
T ss_pred             CCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHH--cCCCCcCccHHHHHHHHHHCCCEEEEEcCC-chhHHHHH
Confidence            357899999999998642110  0   111000000000  113578999999999999999999999999 6   5567


Q ss_pred             HHHHhhCCCc--cccccceEecC-CCHHHHHHHHHHcCCCCCcEEEEeCCcCCccccc-------c---------cCceE
Q psy8911         197 KQILNLINLN--QYFSNKEIYPG-PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVS-------P---------LGVTC  257 (280)
Q Consensus       197 ~~~l~~~gl~--~~f~~~~~~~~-~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~-------~---------aG~~~  257 (280)
                      ...|+.+|+.  .+|+.+...+. .|+.....+. ..+  ...|+||||+.+|+.+|+       +         +|+++
T Consensus       135 ~~~L~~~Gl~~v~~~~vi~~~~~~~K~~~~~~~~-~~~--~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~  211 (258)
T 2i33_A          135 IKNLERVGAPQATKEHILLQDPKEKGKEKRRELV-SQT--HDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKF  211 (258)
T ss_dssp             HHHHHHHTCSSCSTTTEEEECTTCCSSHHHHHHH-HHH--EEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTE
T ss_pred             HHHHHHcCCCcCCCceEEECCCCCCCcHHHHHHH-HhC--CCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCce
Confidence            7888999998  77775443332 3455444433 333  345999999999999994       3         89999


Q ss_pred             EEECCCC
Q psy8911         258 IHVKKGM  264 (280)
Q Consensus       258 i~v~~g~  264 (280)
                      +.++++.
T Consensus       212 i~lpn~~  218 (258)
T 2i33_A          212 IIFPNPM  218 (258)
T ss_dssp             EECCCCS
T ss_pred             EECCCCC
Confidence            9999874

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.57  E-value=5.1e-15  Score=122.83  Aligned_cols=96  Identities=11%  Similarity=0.232  Sum_probs=86.6

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCC---chHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTS---EIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEY   81 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~---~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p   81 (280)
                      .++|++.++|+.|+++|++++++||++   . ...+..++.+++.++|+  .++++       ++...|+.+++++|++|
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~lgi~~  175 (235)
T 2om6_A           99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPG-SYTRLLLERFGLMEFID--KTFFADEVLSYKPRKEMFEKVLNSFEVKP  175 (235)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEEEECCCSSCH-HHHHHHHHHTTCGGGCS--EEEEHHHHTCCTTCHHHHHHHHHHTTCCG
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCcccch-hHHHHHHHhCCcHHHhh--hheeccccCCCCCCHHHHHHHHHHcCCCc
Confidence            469999999999999999999999999   8 78889999999999999  55543       33445999999999999


Q ss_pred             ccEEEEeCCc-ccccccccCCCeEEEEcCC
Q psy8911          82 KDMVFFDDEE-RNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        82 ~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++|++|||+. +|+++|+++|+.++++.++
T Consensus       176 ~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~  205 (235)
T 2om6_A          176 EESLHIGDTYAEDYQGARKVGMWAVWINQE  205 (235)
T ss_dssp             GGEEEEESCTTTTHHHHHHTTSEEEEECTT
T ss_pred             cceEEECCChHHHHHHHHHCCCEEEEECCC
Confidence            9999999999 9999999999999999766

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.56  E-value=9.9e-16  Score=127.70  Aligned_cols=100  Identities=20%  Similarity=0.288  Sum_probs=86.5

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHH------hhcCccccccccceecC-------CChhHHHHHHHHhC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLL------DLFNWNQYFDHKQIFPG-------QKTTHFANLKKATG   78 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l------~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g   78 (280)
                      .++||+.++|+.|+++ ++++|+||++. ...+.++      +.+++.++|+  .++++       +++..|+.+++++|
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~-~~~~~~~~~l~~~~~~~l~~~fd--~i~~~~~~~~~KP~~~~~~~~~~~~g  187 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNTND-IHWKWVCKNAFPYRTFKVEDYFE--KTYLSYEMKMAKPEPEIFKAVTEDAG  187 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECCCH-HHHHHHHHHTSCBTTBCHHHHCS--EEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECCCh-HHHHHHHhhhhhhccCCHHHhCC--EEEeecccCCCCCCHHHHHHHHHHcC
Confidence            4689999999999999 99999999999 7777554      7889999999  66543       23355999999999


Q ss_pred             CCCccEEEEeCCcccccccccCCCeEEEEcCCCchhh
Q psy8911          79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAI  115 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~  115 (280)
                      ++|++|+||||+.+|+++|+++|+.++++.++....+
T Consensus       188 ~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~  224 (229)
T 4dcc_A          188 IDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSH  224 (229)
T ss_dssp             CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGG
T ss_pred             CCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence            9999999999999999999999999999987765444

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.56  E-value=2.7e-15  Score=127.05  Aligned_cols=95  Identities=17%  Similarity=0.232  Sum_probs=85.9

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~   82 (280)
                      .+.++||+.++|+.|+  |++++|+||++. ..++..++.+++..+|+  .+++++       +...|+.+++++|++|+
T Consensus        91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~-~~~~~~l~~~gl~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~  165 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELA--PLKRAILSNGAP-DMLQALVANAGLTDSFD--AVISVDAKRVFKPHPDSYALVEEVLGVTPA  165 (253)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCH-HHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTSHHHHHHHHHHHCCCGG
T ss_pred             cCCCCccHHHHHHHHc--CCCEEEEeCcCH-HHHHHHHHHCCchhhcc--EEEEccccCCCCCCHHHHHHHHHHcCCCHH
Confidence            4688999999999999  999999999999 88999999999999999  565542       23349999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      +|++|||+.+|+++|+++|+.++++..
T Consensus       166 ~~~~vGD~~~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          166 EVLFVSSNGFDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             GEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred             HEEEEeCChhhHHHHHHCCCEEEEECC
Confidence            999999999999999999999999976

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.56  E-value=2.1e-15  Score=123.10  Aligned_cols=94  Identities=21%  Similarity=0.262  Sum_probs=84.6

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCCcc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEYKD   83 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p~~   83 (280)
                      +.++||+.+ |+.|+++ ++++|+||++. ..++..++.+++.++|+  .+++++       +...|+.+++++|  |++
T Consensus        73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~  145 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEI-AEVYALSNGSI-NEVKQHLERNGLLRYFK--GIFSAESVKEYKPSPKVYKYFLDSIG--AKE  145 (201)
T ss_dssp             CEECGGGGG-HHHHHHH-SEEEEEESSCH-HHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTCHHHHHHHHHHHT--CSC
T ss_pred             cccCCChHH-HHHHHhC-CeEEEEeCcCH-HHHHHHHHHCCcHHhCc--EEEehhhcCCCCCCHHHHHHHHHhcC--CCc
Confidence            689999999 9999999 99999999999 88999999999999999  666542       2344999999999  999


Q ss_pred             EEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|||+.+|+++|+++|+.++++.++.
T Consensus       146 ~~~vGD~~~Di~~a~~aG~~~~~~~~~~  173 (201)
T 2w43_A          146 AFLVSSNAFDVIGAKNAGMRSIFVNRKN  173 (201)
T ss_dssp             CEEEESCHHHHHHHHHTTCEEEEECSSS
T ss_pred             EEEEeCCHHHhHHHHHCCCEEEEECCCC
Confidence            9999999999999999999999997753

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.56  E-value=4.1e-16  Score=127.40  Aligned_cols=102  Identities=25%  Similarity=0.348  Sum_probs=88.1

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh-cCccccccccceecC-------CChhHHHHHHHHhCCCCc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL-FNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEYK   82 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~-~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p~   82 (280)
                      ..++||+.++|+.|+++|++++|+||++. ...+..++. +++.++|+  .++++       ++...|..+++++|++|+
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~  166 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEIRDAAD--HIYLSQDLGMRKPEARIYQHVLQAEGFSPS  166 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCC-CTTSCCGGGCHHHHHHCS--EEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCCh-HHHHHHHHhccChhhhee--eEEEecccCCCCCCHHHHHHHHHHcCCCHH
Confidence            68899999999999999999999999998 666666776 78899999  66553       233459999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCCchhh
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGMTNAI  115 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~  115 (280)
                      +|+||||+.+|+.+|+++|+.++++.++.....
T Consensus       167 ~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~  199 (206)
T 2b0c_A          167 DTVFFDDNADNIEGANQLGITSILVKDKTTIPD  199 (206)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECCSTTHHHH
T ss_pred             HeEEeCCCHHHHHHHHHcCCeEEEecCCchHHH
Confidence            999999999999999999999999987765433

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.56  E-value=1.7e-15  Score=126.75  Aligned_cols=100  Identities=12%  Similarity=0.072  Sum_probs=84.7

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEE
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFF   87 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v   87 (280)
                      ...+.++||+.++|+.|+++| +++|+||++. ..++..++.+|+.++|+........+...++.+++  |++|++|+||
T Consensus        92 ~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~-~~~~~~l~~~gl~~~f~~~~~~~~~K~~~~~~~~~--~~~~~~~~~v  167 (231)
T 2p11_A           92 PFASRVYPGALNALRHLGARG-PTVILSDGDV-VFQPRKIARSGLWDEVEGRVLIYIHKELMLDQVME--CYPARHYVMV  167 (231)
T ss_dssp             CGGGGBCTTHHHHHHHHHTTS-CEEEEEECCS-SHHHHHHHHTTHHHHTTTCEEEESSGGGCHHHHHH--HSCCSEEEEE
T ss_pred             HHhCCcCccHHHHHHHHHhCC-CEEEEeCCCH-HHHHHHHHHcCcHHhcCeeEEecCChHHHHHHHHh--cCCCceEEEE
Confidence            345789999999999999999 9999999999 88999999999999999432223344444666665  7999999999


Q ss_pred             eCCcc---cccccccCCCeEEEEcCCC
Q psy8911          88 DDEER---NSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        88 ~D~~~---~i~aa~~~G~~~i~v~~~~  111 (280)
                      ||+..   |+++|+++|++++++.++.
T Consensus       168 gDs~~d~~di~~A~~aG~~~i~v~~g~  194 (231)
T 2p11_A          168 DDKLRILAAMKKAWGARLTTVFPRQGH  194 (231)
T ss_dssp             CSCHHHHHHHHHHHGGGEEEEEECCSS
T ss_pred             cCccchhhhhHHHHHcCCeEEEeCCCC
Confidence            99998   9999999999999998763

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.55  E-value=1.5e-14  Score=119.18  Aligned_cols=99  Identities=17%  Similarity=0.234  Sum_probs=88.8

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~   82 (280)
                      ...++|++.++|+.|+++|++++++||++. ...+..++.+++..+|+  .+++++.       ...|+.+++++|++|+
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~~~~~~~--~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~  168 (226)
T 1te2_A           92 TRPLLPGVREAVALCKEQGLLVGLASASPL-HMLEKVLTMFDLRDSFD--ALASAEKLPYSKPHPQVYLDCAAKLGVDPL  168 (226)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCS--EEEECTTSSCCTTSTHHHHHHHHHHTSCGG
T ss_pred             cCCcCccHHHHHHHHHHCCCcEEEEeCCcH-HHHHHHHHhcCcHhhCc--EEEeccccCCCCCChHHHHHHHHHcCCCHH
Confidence            467899999999999999999999999999 88899999999999999  5655432       3449999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +|++|||+.+|+++|+++|+.++++.++.
T Consensus       169 ~~i~iGD~~nDi~~a~~aG~~~~~~~~~~  197 (226)
T 1te2_A          169 TCVALEDSVNGMIASKAARMRSIVVPAPE  197 (226)
T ss_dssp             GEEEEESSHHHHHHHHHTTCEEEECCCTT
T ss_pred             HeEEEeCCHHHHHHHHHcCCEEEEEcCCC
Confidence            99999999999999999999999997764

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.54  E-value=7e-15  Score=121.00  Aligned_cols=95  Identities=13%  Similarity=0.177  Sum_probs=84.3

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccccee-----------------cCCChhHHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIF-----------------PGQKTTHFA   71 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~-----------------~~~~~~~~~   71 (280)
                      ..++++||+.++|+.|+++|++++++||++. ..++..++.+++..+|+  .++                 ..++...|+
T Consensus        72 ~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~-~~~~~~l~~~gl~~~f~--~~~~~~~~~~~~~~~~~~~~~k~k~~~~~  148 (217)
T 3m1y_A           72 ESLPLFEGALELVSALKEKNYKVVCFSGGFD-LATNHYRDLLHLDAAFS--NTLIVENDALNGLVTGHMMFSHSKGEMLL  148 (217)
T ss_dssp             TTCCBCBTHHHHHHHHHTTTEEEEEEEEEEH-HHHHHHHHHHTCSEEEE--EEEEEETTEEEEEEEESCCSTTHHHHHHH
T ss_pred             hcCcCCCCHHHHHHHHHHCCCEEEEEcCCch-hHHHHHHHHcCcchhcc--ceeEEeCCEEEeeeccCCCCCCChHHHHH
Confidence            3478999999999999999999999999999 89999999999999999  443                 112333499


Q ss_pred             HHHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          72 NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        72 ~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      .+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus       149 ~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~  183 (217)
T 3m1y_A          149 VLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF  183 (217)
T ss_dssp             HHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred             HHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence            99999999999999999999999999999998876

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=99.53  E-value=6.9e-16  Score=124.84  Aligned_cols=132  Identities=14%  Similarity=0.049  Sum_probs=99.8

Q ss_pred             cceeEEEecCCCCCCccccccc-CcccccCCee-Ec--cCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHH
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIGQKV-MD--AKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL  200 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l  200 (280)
                      ..+++++|+|+||+.+...... +.+.   -.+ .+  .+...+.++||+.++|+.|++. ++++|+|++ .+.+++.++
T Consensus        14 ~k~~LVLDLD~TLvhs~~~~~~~~d~~---~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~-~~~~a~~vl   88 (181)
T 2ght_A           14 DKICVVINLDETLVHSSFKPVNNADFI---IPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTAS-LAKYADPVA   88 (181)
T ss_dssp             TSCEEEECCBTTTEEEESSCCSSCSEE---EEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSS-CHHHHHHHH
T ss_pred             CCeEEEECCCCCeECCcccCCCCccce---eeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCC-CHHHHHHHH
Confidence            3468999999999875432111 0000   000 00  1123468899999999999998 999999999 999999999


Q ss_pred             hhCCCccccccceEecC--CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         201 NLINLNQYFSNKEIYPG--PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       201 ~~~gl~~~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      +.++...+|+.+...+.  ..++.|.+.++++|.++++|++|||++.++.++.++|+.+....
T Consensus        89 ~~ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~~~~  151 (181)
T 2ght_A           89 DLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWF  151 (181)
T ss_dssp             HHHCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCCCCS
T ss_pred             HHHCCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEecccc
Confidence            99999999987543322  12356788889999999999999999999999999999964443

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.53  E-value=9.5e-16  Score=128.32  Aligned_cols=101  Identities=14%  Similarity=0.117  Sum_probs=82.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEE---------------------------------EEcCCCcHHHHHHHHhhCC-Cccc
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVA---------------------------------AASRTSEILHAKQILNLIN-LNQY  208 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~---------------------------------i~T~~~~~~~~~~~l~~~g-l~~~  208 (280)
                      ...+++|+.++|+.|++.|++++                                 ++||. . ......++.++ +..+
T Consensus        85 ~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~-~-~~~~~~~~~~~~~~~~  162 (250)
T 2c4n_A           85 KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNP-D-THGRGFYPACGALCAG  162 (250)
T ss_dssp             CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCC-C-SBSSTTCBCHHHHHHH
T ss_pred             CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECC-C-CCCCCeeecchHHHHH
Confidence            45678999999999999999999                                 99998 4 33344455555 5555


Q ss_pred             cccc-----eEecCCCHHHHHHHHHHcCCCCCcEEEEeCC-cCCcccccccCceEEEECCCCC
Q psy8911         209 FSNK-----EIYPGPKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       209 f~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~-~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |+..     .....||+..|..+++++|++|++|++|||+ .+|+++++++|+.+++|.+|..
T Consensus       163 ~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~  225 (250)
T 2c4n_A          163 IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVS  225 (250)
T ss_dssp             HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSC
T ss_pred             HHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCC
Confidence            6542     2234689999999999999999999999999 6999999999999999998764

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.53  E-value=8.7e-15  Score=118.60  Aligned_cols=101  Identities=13%  Similarity=0.155  Sum_probs=89.7

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++|++.++|+.|+++|++++++||+ ...... .++.+++.++|+.+....     +|++..+..+++++|++|++
T Consensus        82 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~  159 (207)
T 2go7_A           82 AQVVLMPGAREVLAWADESGIQQFIYTHK-GNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDN  159 (207)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEECSS-CTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGG
T ss_pred             ccceeCcCHHHHHHHHHHCCCeEEEEeCC-chHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCccc
Confidence            45678999999999999999999999999 777788 899999999998653322     36678999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      +++|||+.+|+.+|+++|+.++++.++.
T Consensus       160 ~~~iGD~~nDi~~~~~aG~~~i~~~~~~  187 (207)
T 2go7_A          160 TYYIGDRTLDVEFAQNSGIQSINFLEST  187 (207)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred             EEEECCCHHHHHHHHHCCCeEEEEecCC
Confidence            9999999999999999999999998764

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.52  E-value=3.9e-15  Score=126.89  Aligned_cols=199  Identities=11%  Similarity=0.106  Sum_probs=125.1

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh----cCccccccccceecCCChhHHHHHHHHhCCCCccEEEE
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL----FNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFF   87 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~----~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v   87 (280)
                      ..++++.+.|+.|+++|+++.++||.+. .......+.    +|+....+  .++.+.  +.....++..  .+...+++
T Consensus        21 ~~~~~~~~~l~~l~~~g~~~~~~t~~~~-~~~~~~~~~l~~~~g~~~~~~--~~~~~~--~~~~~~~~~~--~~~~~~~~   93 (264)
T 1yv9_A           21 EPIPAGKRFVERLQEKDLPFLFVTNNTT-KSPETVAQRLANEFDIHVPAS--LVYTAT--LATIDYMKEA--NRGKKVFV   93 (264)
T ss_dssp             EECHHHHHHHHHHHHTTCCEEEEECCCS-SCHHHHHHHHHHHSCCCCCGG--GEEEHH--HHHHHHHHHH--CCCSEEEE
T ss_pred             EECcCHHHHHHHHHHCCCeEEEEeCCCC-CCHHHHHHHHHHhcCCCCChh--hEEcHH--HHHHHHHHhh--CCCCEEEE
Confidence            3567899999999999999999999877 444444433    67643333  343321  1111112222  22333333


Q ss_pred             eCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccC
Q psy8911          88 DDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYY  167 (280)
Q Consensus        88 ~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (280)
                      -....=.+..++.|+....   .           .   ...+..                           .. ....+|
T Consensus        94 ~g~~~l~~~l~~~g~~~~~---~-----------~---~~~v~~---------------------------~~-~~~~~~  128 (264)
T 1yv9_A           94 IGEAGLIDLILEAGFEWDE---T-----------N---PDYVVV---------------------------GL-DTELSY  128 (264)
T ss_dssp             ESCHHHHHHHHHTTCEECS---S-----------S---CSEEEE---------------------------CC-CTTCCH
T ss_pred             EeCHHHHHHHHHcCCcccC---C-----------C---CCEEEE---------------------------EC-CCCcCH
Confidence            2222223334444443220   0           0   000000                           11 124578


Q ss_pred             CCHHHHHHHHhhCCcEEEEEcCCCcHHH--HHH-HHhhCCCccccccce-----EecCCCHHHHHHHHHHcCCCCCcEEE
Q psy8911         168 RGVPEILRYLKENKCLVAAASRTSEILH--AKQ-ILNLINLNQYFSNKE-----IYPGPKTTHFESLKKATGIEYKDMVF  239 (280)
Q Consensus       168 ~g~~~~L~~L~~~g~~~~i~T~~~~~~~--~~~-~l~~~gl~~~f~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~l~  239 (280)
                      |++.++|+.|+ +|+++ |+||+ ....  ... .++..++..+|+.+.     ...+|++..|..+++++|++|++|+|
T Consensus       129 ~~~~~~l~~l~-~g~~~-i~tn~-~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~  205 (264)
T 1yv9_A          129 EKVVLATLAIQ-KGALF-IGTNP-DKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIM  205 (264)
T ss_dssp             HHHHHHHHHHH-TTCEE-EESCC-CSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEE
T ss_pred             HHHHHHHHHHh-CCCEE-EEECC-CCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            99999999997 89998 99998 4421  111 233334667777532     23467888999999999999999999


Q ss_pred             EeCC-cCCcccccccCceEEEECCCCC
Q psy8911         240 FDDE-ERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       240 igD~-~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |||+ .+|+.+|+++|+.+++|.+|..
T Consensus       206 vGD~~~~Di~~a~~aG~~~i~v~~g~~  232 (264)
T 1yv9_A          206 VGDNYETDIQSGIQNGIDSLLVTSGFT  232 (264)
T ss_dssp             EESCTTTHHHHHHHHTCEEEEETTSSS
T ss_pred             ECCCcHHHHHHHHHcCCcEEEECCCCC
Confidence            9999 5999999999999999998764

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.52  E-value=1.7e-15  Score=122.79  Aligned_cols=97  Identities=9%  Similarity=-0.033  Sum_probs=77.7

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec------CCCHHHHHHHHHHcCCCCC
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP------GPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~------~~k~~~~~~~~~~~~~~~~  235 (280)
                      ....++||+.++|+.|+++|++++|+||+ ....++.. +.+|+.++|+.+.+..      .|.+.....+++++  +|+
T Consensus        76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~  151 (201)
T 4ap9_A           76 EKVNVSPEARELVETLREKGFKVVLISGS-FEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDG  151 (201)
T ss_dssp             GGCCCCHHHHHHHHHHHHTTCEEEEEEEE-ETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTS
T ss_pred             HhCCCChhHHHHHHHHHHCCCeEEEEeCC-cHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcC
Confidence            45688999999999999999999999999 78778888 9999998865433222      23333356666776  999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +|++|||+.+|+.+|+++|+. +++.++
T Consensus       152 ~~i~iGD~~~Di~~~~~ag~~-v~~~~~  178 (201)
T 4ap9_A          152 FILAMGDGYADAKMFERADMG-IAVGRE  178 (201)
T ss_dssp             CEEEEECTTCCHHHHHHCSEE-EEESSC
T ss_pred             cEEEEeCCHHHHHHHHhCCce-EEECCC
Confidence            999999999999999999997 555443

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.51  E-value=2.4e-14  Score=123.05  Aligned_cols=100  Identities=21%  Similarity=0.267  Sum_probs=88.4

Q ss_pred             CcceecCCHHHHHHHHHHCCc--eEEEecCCCchHHHHHHHhhcCccccccccceecC-----------CChhHHHHHHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNNC--LVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-----------QKTTHFANLKK   75 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~--~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-----------~~~~~~~~~~~   75 (280)
                      ..+.++||+.++|+.|+++|+  +++|+||++. ..++..++.+++.++|+  .++++           ++...|+.+++
T Consensus       139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~-~~~~~~l~~~gl~~~fd--~v~~~~~~~~~~~~~Kp~~~~~~~~~~  215 (282)
T 3nuq_A          139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYK-NHAIRCLRLLGIADLFD--GLTYCDYSRTDTLVCKPHVKAFEKAMK  215 (282)
T ss_dssp             GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCH-HHHHHHHHHHTCTTSCS--EEECCCCSSCSSCCCTTSHHHHHHHHH
T ss_pred             hccCcChhHHHHHHHHHhCCCCceEEEEECCCh-HHHHHHHHhCCcccccc--eEEEeccCCCcccCCCcCHHHHHHHHH
Confidence            447899999999999999999  9999999999 88999999999999999  55533           23344999999


Q ss_pred             HhCCCC-ccEEEEeCCcccccccccCCC-eEEEEcCCC
Q psy8911          76 ATGIEY-KDMVFFDDEERNSHDVSPLGV-TCILVEDGM  111 (280)
Q Consensus        76 ~~g~~p-~~~l~v~D~~~~i~aa~~~G~-~~i~v~~~~  111 (280)
                      ++|++| ++|++|||+.+|+.+|+++|+ .++++..+.
T Consensus       216 ~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~  253 (282)
T 3nuq_A          216 ESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENE  253 (282)
T ss_dssp             HHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCC
T ss_pred             HcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCc
Confidence            999999 999999999999999999999 777776654

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.51  E-value=1.5e-14  Score=119.96  Aligned_cols=95  Identities=12%  Similarity=0.231  Sum_probs=83.4

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p   81 (280)
                      ..+.++||+.++|+.|+++ ++++++||++. .     ++.+++.++|+  .++++       ++...|+.+++++|++|
T Consensus       102 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~-----l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~  172 (230)
T 3vay_A          102 HQVQIFPEVQPTLEILAKT-FTLGVITNGNA-D-----VRRLGLADYFA--FALCAEDLGIGKPDPAPFLEALRRAKVDA  172 (230)
T ss_dssp             TCCCBCTTHHHHHHHHHTT-SEEEEEESSCC-C-----GGGSTTGGGCS--EEEEHHHHTCCTTSHHHHHHHHHHHTCCG
T ss_pred             ccCccCcCHHHHHHHHHhC-CeEEEEECCch-h-----hhhcCcHHHee--eeEEccccCCCCcCHHHHHHHHHHhCCCc
Confidence            4577999999999999998 99999999998 4     78899999999  66543       33445999999999999


Q ss_pred             ccEEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911          82 KDMVFFDDEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        82 ~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|++|||+. +|+++|+++|+.++++.++..
T Consensus       173 ~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~  204 (230)
T 3vay_A          173 SAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGK  204 (230)
T ss_dssp             GGEEEEESCTTTTHHHHHHTTCEEEEECTTCC
T ss_pred             hheEEEeCChHHHHHHHHHCCCEEEEEcCCCC
Confidence            9999999997 999999999999999976543

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.51  E-value=2.5e-14  Score=121.62  Aligned_cols=102  Identities=15%  Similarity=0.074  Sum_probs=90.4

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc-ccceEe-----cCCCHHHHHHHHHHcCCCC-C
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNKEIY-----PGPKTTHFESLKKATGIEY-K  235 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f-~~~~~~-----~~~k~~~~~~~~~~~~~~~-~  235 (280)
                      ...++||+.++|+.|+++|++++++||+ ....+...++.+|+..+| +.+.+.     ..|++..+..+++++|++| +
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~  179 (267)
T 1swv_A          101 YASPINGVKEVIASLRERGIKIGSTTGY-TREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMN  179 (267)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSS-CHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGG
T ss_pred             ccccCccHHHHHHHHHHcCCeEEEEcCC-CHHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCc
Confidence            4568999999999999999999999999 888888899999988886 654332     2488899999999999999 9


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|++|||+.+|+++|+++|+.+++|.+|..
T Consensus       180 ~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~  209 (267)
T 1swv_A          180 HMIKVGDTVSDMKEGRNAGMWTVGVILGSS  209 (267)
T ss_dssp             GEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred             CEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence            999999999999999999999999998764

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.50  E-value=2.1e-14  Score=116.30  Aligned_cols=99  Identities=12%  Similarity=0.200  Sum_probs=88.2

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ....++|++.++|+.|+++|++++++||++. ...+ .++.+++.++|+  .+++++       +...|..+++++|++|
T Consensus        82 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~-~~~~~~~~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~  157 (207)
T 2go7_A           82 AQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFT-ILKDLGVESYFT--EILTSQSGFVRKPSPEAATYLLDKYQLNS  157 (207)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHH-HHHHHTCGGGEE--EEECGGGCCCCTTSSHHHHHHHHHHTCCG
T ss_pred             ccceeCcCHHHHHHHHHHCCCeEEEEeCCch-HHHH-HHHHcCchhhee--eEEecCcCCCCCCCcHHHHHHHHHhCCCc
Confidence            5578999999999999999999999999999 7888 999999999999  555432       2445999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ++|++|||+.+|+++|+++|+.++++.++.
T Consensus       158 ~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~  187 (207)
T 2go7_A          158 DNTYYIGDRTLDVEFAQNSGIQSINFLEST  187 (207)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred             ccEEEECCCHHHHHHHHHCCCeEEEEecCC
Confidence            999999999999999999999999997664

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.50  E-value=9.4e-15  Score=121.40  Aligned_cols=101  Identities=13%  Similarity=0.100  Sum_probs=82.9

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCch--------------HHHHHHHhhcCcccccccc--ce------------
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEI--------------QGAQQLLDLFNWNQYFDHK--QI------------   61 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--------------~~~~~~l~~~~l~~~fd~~--~i------------   61 (280)
                      ..+++||+.++|+.|+++|++++|+||++..              ..++..++.+|+.  |+..  ..            
T Consensus        54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~  131 (218)
T 2o2x_A           54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIP  131 (218)
T ss_dssp             GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCS
T ss_pred             cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeeccc
Confidence            4789999999999999999999999999862              2567788998874  4411  11            


Q ss_pred             ---ecCCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeE-EEEcCCCc
Q psy8911          62 ---FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC-ILVEDGMT  112 (280)
Q Consensus        62 ---~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~-i~v~~~~~  112 (280)
                         ...++...|+.+++++|++|++|+||||+..|+.+|+++|+.+ +++.++..
T Consensus       132 ~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~  186 (218)
T 2o2x_A          132 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAA  186 (218)
T ss_dssp             SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCE
T ss_pred             CCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCC
Confidence               1122344599999999999999999999999999999999999 99987754

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.50  E-value=2.7e-14  Score=122.58  Aligned_cols=114  Identities=12%  Similarity=0.139  Sum_probs=94.2

Q ss_pred             CCcceecCCHHHHHHHHHHC-CceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQN-NCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGI   79 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~-g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~   79 (280)
                      .....++||+.++|+.|+++ |++++++||++. ..++..++.+++. +|+  .+++++       +...|+.+++++|+
T Consensus       110 ~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~-~~~~~~l~~~~l~-~f~--~i~~~~~~~~~kp~~~~~~~~~~~lgi  185 (275)
T 2qlt_A          110 GEHSIEVPGAVKLCNALNALPKEKWAVATSGTR-DMAKKWFDILKIK-RPE--YFITANDVKQGKPHPEPYLKGRNGLGF  185 (275)
T ss_dssp             CTTCEECTTHHHHHHHHHTSCGGGEEEECSSCH-HHHHHHHHHHTCC-CCS--SEECGGGCSSCTTSSHHHHHHHHHTTC
T ss_pred             hcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCH-HHHHHHHHHcCCC-ccC--EEEEcccCCCCCCChHHHHHHHHHcCC
Confidence            35678999999999999999 999999999999 8899999999986 587  555442       33449999999999


Q ss_pred             -------CCccEEEEeCCcccccccccCCCeEEEEcCCCchhhhhcccccccc
Q psy8911          80 -------EYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFII  125 (280)
Q Consensus        80 -------~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~  125 (280)
                             +|++|++|||+.+|+++|+++|+.+++|.++..........++++.
T Consensus       186 ~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~  238 (275)
T 2qlt_A          186 PINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIV  238 (275)
T ss_dssp             CCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEE
T ss_pred             CccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE
Confidence                   9999999999999999999999999999887654444333344433

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.50  E-value=2.8e-14  Score=120.80  Aligned_cols=97  Identities=14%  Similarity=0.174  Sum_probs=82.9

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc---c-----eEecCCCHHHHHHHHHHcCCCCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN---K-----EIYPGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~---~-----~~~~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      .++|++.++|+.|+ +|+++ ++||+ ........+..+++.++|+.   +     ....+|++..|..+++++|++|++
T Consensus       122 ~~~~~~~~~l~~l~-~~~~~-i~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~  198 (259)
T 2ho4_A          122 FHYQLLNQAFRLLL-DGAPL-IAIHK-ARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEE  198 (259)
T ss_dssp             CBHHHHHHHHHHHH-TTCCE-EESCC-CSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGG
T ss_pred             CCHHHHHHHHHHHH-CCCEE-EEECC-CCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHH
Confidence            47899999999999 89999 99998 55555556778888888862   1     123468899999999999999999


Q ss_pred             EEEEeCCc-CCcccccccCceEEEECCCC
Q psy8911         237 MVFFDDEE-RNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       237 ~l~igD~~-~di~~a~~aG~~~i~v~~g~  264 (280)
                      |++|||+. +|+.+|+++|+.+++|.+|.
T Consensus       199 ~~~iGD~~~~Di~~a~~aG~~~i~v~~g~  227 (259)
T 2ho4_A          199 AVMIGDDCRDDVDGAQNIGMLGILVKTGK  227 (259)
T ss_dssp             EEEEESCTTTTHHHHHHTTCEEEEESSTT
T ss_pred             EEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence            99999999 99999999999999999873

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.50  E-value=2.1e-14  Score=119.38  Aligned_cols=96  Identities=19%  Similarity=0.266  Sum_probs=82.6

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHH---HHHhC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANL---KKATG   78 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~---~~~~g   78 (280)
                      ..+.++||+.++|+.|++ |++++++||++. ...+..++.  +..+|+  .+++++       +...|..+   ++++|
T Consensus        96 ~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~-~~~~~~l~~--l~~~fd--~i~~~~~~~~~KP~~~~~~~~l~~~~~lg  169 (240)
T 3smv_A           96 KNWPAFPDTVEALQYLKK-HYKLVILSNIDR-NEFKLSNAK--LGVEFD--HIITAQDVGSYKPNPNNFTYMIDALAKAG  169 (240)
T ss_dssp             GGCCBCTTHHHHHHHHHH-HSEEEEEESSCH-HHHHHHHTT--TCSCCS--EEEEHHHHTSCTTSHHHHHHHHHHHHHTT
T ss_pred             hcCCCCCcHHHHHHHHHh-CCeEEEEeCCCh-hHHHHHHHh--cCCccC--EEEEccccCCCCCCHHHHHHHHHHHHhcC
Confidence            346899999999999999 899999999999 788888877  568999  666542       33448888   89999


Q ss_pred             CCCccEEEEeCCc-ccccccccCCCeEEEEcCC
Q psy8911          79 IEYKDMVFFDDEE-RNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        79 ~~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++|++|++|||+. +|+++|+++|+.++++..+
T Consensus       170 i~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~  202 (240)
T 3smv_A          170 IEKKDILHTAESLYHDHIPANDAGLVSAWIYRR  202 (240)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHHHTCEEEEECTT
T ss_pred             CCchhEEEECCCchhhhHHHHHcCCeEEEEcCC
Confidence            9999999999996 9999999999999999654

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.49  E-value=1.5e-14  Score=123.58  Aligned_cols=202  Identities=13%  Similarity=0.069  Sum_probs=125.7

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCc--hHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSE--IQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~   88 (280)
                      -++.|++.+.|+.|+++|+++.++||.+.  .......++.+|+...-+  .++++.... ...+.+..   +...+++.
T Consensus        32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~--~ii~~~~~~-~~~~~~~~---~~~~~~~~  105 (271)
T 1vjr_A           32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDD--AVVTSGEIT-AEHMLKRF---GRCRIFLL  105 (271)
T ss_dssp             TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGG--GEEEHHHHH-HHHHHHHH---CSCEEEEE
T ss_pred             CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChh--hEEcHHHHH-HHHHHHhC---CCCeEEEE
Confidence            35689999999999999999999997643  134445566666542222  333322111 11111211   33344444


Q ss_pred             CCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCC
Q psy8911          89 DEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYR  168 (280)
Q Consensus        89 D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (280)
                      ....-++..++.|+....    .          .   ...+..                           . .....+++
T Consensus       106 ~~~~~~~~l~~~g~~~~~----~----------~---~~~~~~---------------------------~-~~~~~~~~  140 (271)
T 1vjr_A          106 GTPQLKKVFEAYGHVIDE----E----------N---PDFVVL---------------------------G-FDKTLTYE  140 (271)
T ss_dssp             SCHHHHHHHHHTTCEECS----S----------S---CSEEEE---------------------------C-CCTTCCHH
T ss_pred             cCHHHHHHHHHcCCccCC----C----------C---CCEEEE---------------------------e-CCCCcCHH
Confidence            333323344444443210    0          0   000000                           0 11234678


Q ss_pred             CHHHHHHHHhhCCcEEEEEcCCCcHHHHHH---HHhhCCCccccccc------eEecCCCHHHHHHHHHHcCCCCCcEEE
Q psy8911         169 GVPEILRYLKENKCLVAAASRTSEILHAKQ---ILNLINLNQYFSNK------EIYPGPKTTHFESLKKATGIEYKDMVF  239 (280)
Q Consensus       169 g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~---~l~~~gl~~~f~~~------~~~~~~k~~~~~~~~~~~~~~~~~~l~  239 (280)
                      ++.++++.| ..|+++ ++||+ .......   .++..++..+|+.+      ....+||+..|..+++++|++|++|++
T Consensus       141 ~~~~~l~~l-~~~~~~-i~tn~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e~i~  217 (271)
T 1vjr_A          141 RLKKACILL-RKGKFY-IATHP-DINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAM  217 (271)
T ss_dssp             HHHHHHHHH-TTTCEE-EESCC-CSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEE
T ss_pred             HHHHHHHHH-HCCCeE-EEECC-CccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCceEEE
Confidence            999999999 789998 99998 4321111   23334455666532      223468999999999999999999999


Q ss_pred             EeCCc-CCcccccccCceEEEECCCCCH
Q psy8911         240 FDDEE-RNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       240 igD~~-~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      |||++ +|+++|+++|+.+++|.+|...
T Consensus       218 iGD~~~nDi~~a~~aG~~~i~v~~g~~~  245 (271)
T 1vjr_A          218 VGDRLYTDVKLGKNAGIVSILVLTGETT  245 (271)
T ss_dssp             EESCHHHHHHHHHHHTCEEEEESSSSCC
T ss_pred             ECCCcHHHHHHHHHcCCeEEEECCCCCC
Confidence            99995 9999999999999999988653

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.49  E-value=5.6e-14  Score=115.49  Aligned_cols=94  Identities=24%  Similarity=0.342  Sum_probs=83.0

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~   82 (280)
                      ...++||+.++|+.|+++|++++++||+ .  ..+..++.+++.++|+  .+++++.       ...|+.+++++|++|+
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~--~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~  163 (221)
T 2wf7_A           89 PADVYPGILQLLKDLRSNKIKIALASAS-K--NGPFLLERMNLTGYFD--AIADPAEVAASKPAPDIFIAAAHAVGVAPS  163 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTTCEEEECCCC-T--THHHHHHHTTCGGGCS--EECCTTTSSSCTTSSHHHHHHHHHTTCCGG
T ss_pred             CCCCCCCHHHHHHHHHHCCCeEEEEcCc-H--HHHHHHHHcChHHHcc--eEeccccCCCCCCChHHHHHHHHHcCCChh
Confidence            4678999999999999999999999999 3  3577889999999999  6665432       2359999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEc
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~  108 (280)
                      +|++|||+.+|+++|+++|+.++++.
T Consensus       164 ~~i~iGD~~nDi~~a~~aG~~~~~~~  189 (221)
T 2wf7_A          164 ESIGLEDSQAGIQAIKDSGALPIGVG  189 (221)
T ss_dssp             GEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             HeEEEeCCHHHHHHHHHCCCEEEEEC
Confidence            99999999999999999999999984

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.49  E-value=2.9e-14  Score=117.26  Aligned_cols=96  Identities=23%  Similarity=0.333  Sum_probs=84.2

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++++||+ .  .++..++.+++.++|+.+...     .+|++..|..+++++|++|++|
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~--~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  165 (221)
T 2wf7_A           89 PADVYPGILQLLKDLRSNKIKIALASAS-K--NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSES  165 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTTCEEEECCCC-T--THHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CCCCCCCHHHHHHHHHHCCCeEEEEcCc-H--HHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHe
Confidence            3568999999999999999999999998 3  356788899999999865332     2366789999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEEC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ++|||+.+|+++|+++|+.++.++
T Consensus       166 i~iGD~~nDi~~a~~aG~~~~~~~  189 (221)
T 2wf7_A          166 IGLEDSQAGIQAIKDSGALPIGVG  189 (221)
T ss_dssp             EEEESSHHHHHHHHHHTCEEEEES
T ss_pred             EEEeCCHHHHHHHHHCCCEEEEEC
Confidence            999999999999999999999985

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.48  E-value=5.8e-14  Score=115.47  Aligned_cols=100  Identities=18%  Similarity=0.216  Sum_probs=89.0

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p   81 (280)
                      ....++|++.++|+.|+++|++++++||++. ...+..++.+++..+|+  .++++       ++...|..+++++|++|
T Consensus        86 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~~~~~~~~~~~~~~~~~  162 (225)
T 3d6j_A           86 ANTILFPDTLPTLTHLKKQGIRIGIISTKYR-FRILSFLRNHMPDDWFD--IIIGGEDVTHHKPDPEGLLLAIDRLKACP  162 (225)
T ss_dssp             GGCEECTTHHHHHHHHHHHTCEEEEECSSCH-HHHHHHHHTSSCTTCCS--EEECGGGCSSCTTSTHHHHHHHHHTTCCG
T ss_pred             ccCccCcCHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHHHcCchhhee--eeeehhhcCCCCCChHHHHHHHHHhCCCh
Confidence            4568899999999999999999999999998 88899999999999999  55543       22345999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ++|++|||+.+|+++|+++|+.++++.++.
T Consensus       163 ~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~  192 (225)
T 3d6j_A          163 EEVLYIGDSTVDAGTAAAAGVSFTGVTSGM  192 (225)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEETTSS
T ss_pred             HHeEEEcCCHHHHHHHHHCCCeEEEECCCC
Confidence            999999999999999999999999997754

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.48  E-value=4.6e-14  Score=120.00  Aligned_cols=101  Identities=10%  Similarity=0.035  Sum_probs=88.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-cccceecC-------CChhHHHHHHHHhCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-DHKQIFPG-------QKTTHFANLKKATGIE   80 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d~~~i~~~-------~~~~~~~~~~~~~g~~   80 (280)
                      ....++||+.++|+.|+++|++++++||++. ...+..++.+++.++| +  .++++       ++...|+.+++++|++
T Consensus       100 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~kp~~~~~~~~~~~lgi~  176 (267)
T 1swv_A          100 RYASPINGVKEVIASLRERGIKIGSTTGYTR-EMMDIVAKEAALQGYKPD--FLVTPDDVPAGRPYPWMCYKNAMELGVY  176 (267)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCH-HHHHHHHHHHHHTTCCCS--CCBCGGGSSCCTTSSHHHHHHHHHHTCC
T ss_pred             cccccCccHHHHHHHHHHcCCeEEEEcCCCH-HHHHHHHHHcCCcccChH--heecCCccCCCCCCHHHHHHHHHHhCCC
Confidence            4467899999999999999999999999998 8888999999988886 7  44443       2344599999999999


Q ss_pred             C-ccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          81 Y-KDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        81 p-~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      | ++|++|||+.+|+++|+++|+.++++..+..
T Consensus       177 ~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~  209 (267)
T 1swv_A          177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSS  209 (267)
T ss_dssp             SGGGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred             CCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence            9 9999999999999999999999999987643

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.48  E-value=6.6e-15  Score=136.77  Aligned_cols=99  Identities=19%  Similarity=0.224  Sum_probs=82.4

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCC--CchHHHHHHHhhc--CccccccccceecC-------CChhHHHHHHHHhC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRT--SEIQGAQQLLDLF--NWNQYFDHKQIFPG-------QKTTHFANLKKATG   78 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~--~~~~~~~~~l~~~--~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g   78 (280)
                      ...++||+.++|+.|+++|++++|+||+  .. ...+..+...  ++.++||  .++++       +++..|+.+++++|
T Consensus        98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~-~~~~~~~~~~~~~l~~~fd--~i~~~~~~~~~KP~p~~~~~~~~~lg  174 (555)
T 3i28_A           98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDD-RAERDGLAQLMCELKMHFD--FLIESCQVGMVKPEPQIYKFLLDTLK  174 (555)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCCC-STTHHHHHHHHHHHHTTSS--EEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred             hcCcChhHHHHHHHHHHCCCEEEEEeCCCccc-cchhhHHHHHhhhhhhhee--EEEeccccCCCCCCHHHHHHHHHHcC
Confidence            4689999999999999999999999998  22 2223344444  7889999  66654       23345999999999


Q ss_pred             CCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ++|++|+||||+..|+++|+++||+++++.++.
T Consensus       175 ~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~  207 (555)
T 3i28_A          175 ASPSEVVFLDDIGANLKPARDLGMVTILVQDTD  207 (555)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHTCEEEECSSHH
T ss_pred             CChhHEEEECCcHHHHHHHHHcCCEEEEECCCc
Confidence            999999999999999999999999999997754

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.47  E-value=3e-14  Score=125.18  Aligned_cols=97  Identities=14%  Similarity=0.161  Sum_probs=84.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccccee---------c------CCChhHHHHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIF---------P------GQKTTHFANL   73 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~---------~------~~~~~~~~~~   73 (280)
                      ..++++||+.++|+.|+++|++++|+||++. ..++.+++.+|+..+|+....+         +      .++...|+.+
T Consensus       176 ~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~-~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~  254 (317)
T 4eze_A          176 DRMTLSPGLLTILPVIKAKGFKTAIISGGLD-IFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDL  254 (317)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred             hCCEECcCHHHHHHHHHhCCCEEEEEeCccH-HHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHH
Confidence            4578999999999999999999999999999 9999999999999999932111         1      1223339999


Q ss_pred             HHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          74 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        74 ~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      ++++|++|++|+||||+.+|+.+|+++|+.+++
T Consensus       255 ~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          255 AARLNIATENIIACGDGANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999999997776

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.47  E-value=2.7e-14  Score=119.86  Aligned_cols=95  Identities=9%  Similarity=0.147  Sum_probs=84.2

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p   81 (280)
                      ..+.++||+.++|+.|+++ ++++++||++. ...+..++.+++.  |+  .++++       ++...|+.+++++|++|
T Consensus       113 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~~~~--f~--~~~~~~~~~~~kp~~~~~~~~~~~lgi~~  186 (254)
T 3umg_A          113 HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNT-SLLLDMAKNAGIP--WD--VIIGSDINRKYKPDPQAYLRTAQVLGLHP  186 (254)
T ss_dssp             GSCCBCTTHHHHHHHHHHH-SEEEECSSSCH-HHHHHHHHHHTCC--CS--CCCCHHHHTCCTTSHHHHHHHHHHTTCCG
T ss_pred             hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCH-HHHHHHHHhCCCC--ee--EEEEcCcCCCCCCCHHHHHHHHHHcCCCh
Confidence            4568899999999999997 99999999999 8899999999985  88  55443       23345999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      ++|++|||+.+|+++|+++|+.++++..
T Consensus       187 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~  214 (254)
T 3umg_A          187 GEVMLAAAHNGDLEAAHATGLATAFILR  214 (254)
T ss_dssp             GGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             HHEEEEeCChHhHHHHHHCCCEEEEEec
Confidence            9999999999999999999999999974

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.46  E-value=1.7e-13  Score=116.90  Aligned_cols=49  Identities=16%  Similarity=0.321  Sum_probs=45.2

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEeCC-cCCcccccccCceEEEECCCCC
Q psy8911         217 GPKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       217 ~~k~~~~~~~~~~~~~~~~~~l~igD~-~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|++..|..+++++|++|+++++|||+ .+|+..|+++|+.+++|.+|..
T Consensus       187 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~  236 (268)
T 3qgm_A          187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVT  236 (268)
T ss_dssp             TTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSC
T ss_pred             CCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCC
Confidence            367788999999999999999999999 5999999999999999998764

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.46  E-value=3.8e-14  Score=119.27  Aligned_cols=95  Identities=11%  Similarity=0.177  Sum_probs=84.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p   81 (280)
                      ..+.++||+.++|+.|++. ++++++||++. ...+..++.+++.  |+  .++++       ++...|+.+++++|++|
T Consensus       117 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~g~~--f~--~~~~~~~~~~~kp~~~~~~~~~~~lgi~~  190 (254)
T 3umc_A          117 HRLRPWPDTLAGMHALKAD-YWLAALSNGNT-ALMLDVARHAGLP--WD--MLLCADLFGHYKPDPQVYLGACRLLDLPP  190 (254)
T ss_dssp             GSCEECTTHHHHHHHHTTT-SEEEECCSSCH-HHHHHHHHHHTCC--CS--EECCHHHHTCCTTSHHHHHHHHHHHTCCG
T ss_pred             hcCCCCccHHHHHHHHHhc-CeEEEEeCCCH-HHHHHHHHHcCCC--cc--eEEeecccccCCCCHHHHHHHHHHcCCCh
Confidence            4568899999999999986 99999999999 8899999999985  88  55543       23445999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      ++|++|||+.+|+++|+++|+.++++..
T Consensus       191 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~  218 (254)
T 3umc_A          191 QEVMLCAAHNYDLKAARALGLKTAFIAR  218 (254)
T ss_dssp             GGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             HHEEEEcCchHhHHHHHHCCCeEEEEec
Confidence            9999999999999999999999999973

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.46  E-value=6.8e-14  Score=112.62  Aligned_cols=94  Identities=12%  Similarity=0.181  Sum_probs=83.0

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCCccE
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEYKDM   84 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p~~~   84 (280)
                      .++||+.++|+.|+++|++++++||++.  ..+..++.+++.++|+  .++++       ++...|+.+++++|++  +|
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~~l~~~~~~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~  155 (190)
T 2fi1_A           82 ILFEGVSDLLEDISNQGGRHFLVSHRND--QVLEILEKTSIAAYFT--EVVTSSSGFKRKPNPESMLYLREKYQIS--SG  155 (190)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCT--HHHHHHHHTTCGGGEE--EEECGGGCCCCTTSCHHHHHHHHHTTCS--SE
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEECCcH--HHHHHHHHcCCHhhee--eeeeccccCCCCCCHHHHHHHHHHcCCC--eE
Confidence            3899999999999999999999999876  5788999999999999  55544       2344599999999999  99


Q ss_pred             EEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          85 VFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        85 l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      ++|||+.+|+++|+++|+.++++.++.
T Consensus       156 ~~iGD~~~Di~~a~~aG~~~~~~~~~~  182 (190)
T 2fi1_A          156 LVIGDRPIDIEAGQAAGLDTHLFTSIV  182 (190)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred             EEEcCCHHHHHHHHHcCCeEEEECCCC
Confidence            999999999999999999999997654

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.46  E-value=1.3e-13  Score=117.78  Aligned_cols=48  Identities=13%  Similarity=0.156  Sum_probs=44.7

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCC-cCCcccccccCceEEEECCCCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~-~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |++..|..+++++|++|++++||||+ .+|+..|+++|+.+++|.+|..
T Consensus       183 p~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~  231 (264)
T 3epr_A          183 PNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFT  231 (264)
T ss_dssp             TSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSS
T ss_pred             CCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCC
Confidence            66677999999999999999999999 6999999999999999998864

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.46  E-value=1.5e-13  Score=117.20  Aligned_cols=49  Identities=14%  Similarity=0.309  Sum_probs=43.6

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCC-cCCcccccccCceEEEECCCCCH
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~-~~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      |++..|..+++++|++|+++++|||+ .+|+..|+++|+.+++|.+|...
T Consensus       184 p~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~  233 (266)
T 3pdw_A          184 PESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTK  233 (266)
T ss_dssp             TSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC---
T ss_pred             CCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCC
Confidence            66688999999999999999999999 79999999999999999988643

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.45  E-value=9.3e-14  Score=115.25  Aligned_cols=97  Identities=14%  Similarity=0.131  Sum_probs=81.2

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc--ccccccc-------eecC----------CChhHH
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN--QYFDHKQ-------IFPG----------QKTTHF   70 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~--~~fd~~~-------i~~~----------~~~~~~   70 (280)
                      .++++||+.++|+.|+++|++++|+||++. ..++..++.+|+.  ++|+...       +.+.          .|+..|
T Consensus        84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~  162 (225)
T 1nnl_A           84 PPHLTPGIRELVSRLQERNVQVFLISGGFR-SIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI  162 (225)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred             cCCCCccHHHHHHHHHHCCCcEEEEeCChH-HHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence            467999999999999999999999999999 8999999999997  4887321       1121          123349


Q ss_pred             HHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          71 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      +.+++++|+  ++|+||||+.+|+.+|+++|+ ++++...
T Consensus       163 ~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~  199 (225)
T 1nnl_A          163 KLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGN  199 (225)
T ss_dssp             HHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSS
T ss_pred             HHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCc
Confidence            999999998  899999999999999999999 8888543

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.45  E-value=3.5e-15  Score=121.62  Aligned_cols=90  Identities=9%  Similarity=0.049  Sum_probs=80.9

Q ss_pred             CCcceecCCHHHHHHHHHHC-CceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEE
Q psy8911           8 GAHIKYYPDVPGILKYLKQN-NCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVF   86 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~-g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~   86 (280)
                      ...++++||+.++|+.|+++ |++++|+||++. ..++..++.+|+   |+  .++++       .+++++|++|++|+|
T Consensus        69 ~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~-~~~~~~l~~~gl---f~--~i~~~-------~~~~~~~~~~~~~~~  135 (193)
T 2i7d_A           69 FLDLEPIPGALDAVREMNDLPDTQVFICTSPLL-KYHHCVGEKYRW---VE--QHLGP-------QFVERIILTRDKTVV  135 (193)
T ss_dssp             TTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCS-SCTTTHHHHHHH---HH--HHHCH-------HHHTTEEECSCGGGB
T ss_pred             cccCccCcCHHHHHHHHHhCCCCeEEEEeCCCh-hhHHHHHHHhCc---hh--hhcCH-------HHHHHcCCCcccEEE
Confidence            34678999999999999999 999999999999 788999999998   88  66654       278899999999999


Q ss_pred             EeCCccc----ccccc-cCCCeEEEEcCC
Q psy8911          87 FDDEERN----SHDVS-PLGVTCILVEDG  110 (280)
Q Consensus        87 v~D~~~~----i~aa~-~~G~~~i~v~~~  110 (280)
                      |||+..|    +.+|+ ++||++|+++++
T Consensus       136 vgDs~~dD~~~i~~A~~~aG~~~i~~~~~  164 (193)
T 2i7d_A          136 LGDLLIDDKDTVRGQEETPSWEHILFTCC  164 (193)
T ss_dssp             CCSEEEESSSCCCSSCSSCSSEEEEECCG
T ss_pred             ECCchhhCcHHHhhcccccccceEEEEec
Confidence            9999999    99999 999999999764

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.45  E-value=9.8e-14  Score=109.65  Aligned_cols=90  Identities=11%  Similarity=0.113  Sum_probs=80.2

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcc
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEER   92 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~   92 (280)
                      +.|++.++|+.|+++|++++|+||++. ..++..++.+++..+|+  .  ..++...|+.+++++|++|++|+||||+.+
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~~~--~--~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~  111 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRDS-APLITRLKELGVEEIYT--G--SYKKLEIYEKIKEKYSLKDEEIGFIGDDVV  111 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCCC-HHHHHHHHHTTCCEEEE--C--C--CHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCCc-HHHHHHHHHcCCHhhcc--C--CCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            457789999999999999999999999 89999999999999998  3  345666799999999999999999999999


Q ss_pred             cccccccCCCeEEEE
Q psy8911          93 NSHDVSPLGVTCILV  107 (280)
Q Consensus        93 ~i~aa~~~G~~~i~v  107 (280)
                      |+.+|+++|+.+++.
T Consensus       112 Di~~a~~ag~~~~~~  126 (162)
T 2p9j_A          112 DIEVMKKVGFPVAVR  126 (162)
T ss_dssp             GHHHHHHSSEEEECT
T ss_pred             HHHHHHHCCCeEEec
Confidence            999999999987643

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.45  E-value=4.9e-15  Score=121.19  Aligned_cols=89  Identities=11%  Similarity=0.089  Sum_probs=81.4

Q ss_pred             CcceecCCHHHHHHHHHHC-CceEEEecCCCchHHHHHHHhhcCccc-cccccceecCCChhHHHHHHHHhCCCCccEEE
Q psy8911           9 AHIKYYPDVPGILKYLKQN-NCLVAAASRTSEIQGAQQLLDLFNWNQ-YFDHKQIFPGQKTTHFANLKKATGIEYKDMVF   86 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~-g~~~~i~Sn~~~~~~~~~~l~~~~l~~-~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~   86 (280)
                      ..++++||+.++|+.|+++ |++++|+||++. ..++..++.+++.+ ||+             ..+++++|++|++|+|
T Consensus        72 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~-~~~~~~l~~~~l~~~~f~-------------~~~~~~l~~~~~~~~~  137 (197)
T 1q92_A           72 FELEPLPGAVEAVKEMASLQNTDVFICTSPIK-MFKYCPYEKYAWVEKYFG-------------PDFLEQIVLTRDKTVV  137 (197)
T ss_dssp             TTCCBCTTHHHHHHHHHHSTTEEEEEEECCCS-CCSSHHHHHHHHHHHHHC-------------GGGGGGEEECSCSTTS
T ss_pred             hcCCcCcCHHHHHHHHHhcCCCeEEEEeCCcc-chHHHHHHHhchHHHhch-------------HHHHHHhccCCccEEE
Confidence            4578999999999999999 999999999999 78888999999998 997             4577889999999999


Q ss_pred             EeCCccc----ccccc-cCCCeEEEEcCCC
Q psy8911          87 FDDEERN----SHDVS-PLGVTCILVEDGM  111 (280)
Q Consensus        87 v~D~~~~----i~aa~-~~G~~~i~v~~~~  111 (280)
                      |||+..|    +.+|+ ++||++|+++++.
T Consensus       138 vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~  167 (197)
T 1q92_A          138 SADLLIDDRPDITGAEPTPSWEHVLFTACH  167 (197)
T ss_dssp             CCSEEEESCSCCCCSCSSCSSEEEEECCTT
T ss_pred             ECcccccCCchhhhcccCCCceEEEecCcc
Confidence            9999999    99999 9999999997654

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.45  E-value=1.5e-13  Score=117.47  Aligned_cols=86  Identities=14%  Similarity=0.159  Sum_probs=72.8

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      .++||+.++|+.|+++|++++|+||+ ....++..++++|+.++|+.+.  +..|........+.+     +|+||||+.
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~-~~~~~~~~~~~~gl~~~f~~~~--~~~k~~~~k~~~~~~-----~~~~vGD~~  215 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGD-NRFVAKWVAEELGLDDYFAEVL--PHEKAEKVKEVQQKY-----VTAMVGDGV  215 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHTCSEEECSCC--GGGHHHHHHHHHTTS-----CEEEEECTT
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHcCChhHhHhcC--HHHHHHHHHHHHhcC-----CEEEEeCCc
Confidence            68999999999999999999999999 8999999999999999998643  334555555555543     899999999


Q ss_pred             CCcccccccCceEE
Q psy8911         245 RNSHDVSPLGVTCI  258 (280)
Q Consensus       245 ~di~~a~~aG~~~i  258 (280)
                      +|++++++||+.++
T Consensus       216 nDi~~~~~Ag~~va  229 (280)
T 3skx_A          216 NDAPALAQADVGIA  229 (280)
T ss_dssp             TTHHHHHHSSEEEE
T ss_pred             hhHHHHHhCCceEE
Confidence            99999999997433

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.44  E-value=1.2e-13  Score=113.10  Aligned_cols=95  Identities=14%  Similarity=0.102  Sum_probs=82.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC----------CChhHHHHHHHHhC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG----------QKTTHFANLKKATG   78 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~----------~~~~~~~~~~~~~g   78 (280)
                      ..++++||+.++|+.|+++ ++++|+||++. ..++.+++.+|+..+|+. .+.++          +++..|..+++++|
T Consensus        66 ~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~-~~~~~~l~~~gl~~~f~~-~~~~~~~~~~~~~~~p~p~~~~~~l~~l~  142 (206)
T 1rku_A           66 ATLKPLEGAVEFVDWLRER-FQVVILSDTFY-EFSQPLMRQLGFPTLLCH-KLEIDDSDRVVGYQLRQKDPKRQSVIAFK  142 (206)
T ss_dssp             TTCCCCTTHHHHHHHHHTT-SEEEEEEEEEH-HHHHHHHHHTTCCCEEEE-EEEECTTSCEEEEECCSSSHHHHHHHHHH
T ss_pred             HhcCCCccHHHHHHHHHhc-CcEEEEECChH-HHHHHHHHHcCCcceecc-eeEEcCCceEEeeecCCCchHHHHHHHHH
Confidence            4678999999999999999 99999999999 899999999999999941 23221          33345999999999


Q ss_pred             CCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          79 IEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      ++|++|+||||+.+|+.+|+++|+.+++
T Consensus       143 ~~~~~~~~iGD~~~Di~~a~~aG~~~~~  170 (206)
T 1rku_A          143 SLYYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             HTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             hcCCEEEEEeCChhhHHHHHhcCccEEE
Confidence            9999999999999999999999998663

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.41  E-value=1.1e-13  Score=120.53  Aligned_cols=96  Identities=13%  Similarity=0.036  Sum_probs=79.2

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHH---HHHHHhh--------cCccccccccceecCC----C--hhHHHH
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG---AQQLLDL--------FNWNQYFDHKQIFPGQ----K--TTHFAN   72 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~---~~~~l~~--------~~l~~~fd~~~i~~~~----~--~~~~~~   72 (280)
                      ...+|||+.++|+.|+++|++++|+||++. ..   ....|+.        +++  +|+  .+++++    +  +..+..
T Consensus       186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~-~~~~~~~~~l~~~~~~~~~~~~~--~~~--~~~~~~~~~~kp~p~~~~~  260 (301)
T 1ltq_A          186 TDVINPMVVELSKMYALMGYQIVVVSGRES-GTKEDPTKYYRMTRKWVEDIAGV--PLV--MQCQREQGDTRKDDVVKEE  260 (301)
T ss_dssp             GCCBCHHHHHHHHHHHHTTCEEEEEECSCC-CCSSSTTHHHHHHHHHHHHTTCC--CCS--EEEECCTTCCSCHHHHHHH
T ss_pred             ccCCChHHHHHHHHHHHCCCeEEEEeCCCc-ccchhHHHHHHhcccccccccCC--Cch--heeeccCCCCcHHHHHHHH
Confidence            356899999999999999999999999986 33   3567777        888  588  555432    1  223889


Q ss_pred             HHHHhCCCCcc-EEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          73 LKKATGIEYKD-MVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        73 ~~~~~g~~p~~-~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++++++.+|.+ |+||||+..|+++|+++|+.++.|++|
T Consensus       261 ~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          261 IFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence            99999888755 799999999999999999999999877

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.40  E-value=4.8e-13  Score=115.76  Aligned_cols=91  Identities=14%  Similarity=0.082  Sum_probs=79.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDD  242 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD  242 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+.+.  +.+    ...++++++.+ ++|+||||
T Consensus       161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~-~~~~~~~~l~~~gl~~~f~~i~--~~~----K~~~~~~l~~~-~~~~~vGD  232 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMGIKVGMITGD-NWRSAEAISRELNLDLVIAEVL--PHQ----KSEEVKKLQAK-EVVAFVGD  232 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHTCSEEECSCC--TTC----HHHHHHHHTTT-CCEEEEEC
T ss_pred             ccccchhHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHhCCceeeeecC--hHH----HHHHHHHHhcC-CeEEEEEC
Confidence            4579999999999999999999999999 8888999999999999998642  222    37788999999 99999999


Q ss_pred             CcCCcccccccCceEEEECC
Q psy8911         243 EERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       243 ~~~di~~a~~aG~~~i~v~~  262 (280)
                      +.+|+.+|+++|+. +.+.+
T Consensus       233 s~~Di~~a~~ag~~-v~~~~  251 (287)
T 3a1c_A          233 GINDAPALAQADLG-IAVGS  251 (287)
T ss_dssp             TTTCHHHHHHSSEE-EEECC
T ss_pred             CHHHHHHHHHCCee-EEeCC
Confidence            99999999999998 55543

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.37  E-value=2.2e-13  Score=114.25  Aligned_cols=90  Identities=8%  Similarity=0.074  Sum_probs=76.5

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------------Ch--hH-HH--
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------------KT--TH-FA--   71 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------------~~--~~-~~--   71 (280)
                      .++++||+.++|+.|+++|++++|+||++. ..++.+++  ++.++ +  .+++++             ++  .. |+  
T Consensus        75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~-~~~~~~l~--~l~~~-~--~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~  148 (236)
T 2fea_A           75 DAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPLLE--GIVEK-D--RIYCNHASFDNDYIHIDWPHSCKGTCSNQC  148 (236)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHT--TTSCG-G--GEEEEEEECSSSBCEEECTTCCCTTCCSCC
T ss_pred             CCCCCccHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHh--cCCCC-C--eEEeeeeEEcCCceEEecCCCCcccccccc
Confidence            468999999999999999999999999999 88888888  77665 6  454432             22  21 43  


Q ss_pred             -----HHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          72 -----NLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        72 -----~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                           .+++++|++|++|+||||+.+|+.+|+++|+.++
T Consensus       149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~  187 (236)
T 2fea_A          149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA  187 (236)
T ss_dssp             SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred             CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeee
Confidence                 8899999999999999999999999999999986

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.36  E-value=4.1e-13  Score=111.73  Aligned_cols=96  Identities=9%  Similarity=0.109  Sum_probs=80.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccce-----ec----CC------ChhHHHHHHHH
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQI-----FP----GQ------KTTHFANLKKA   76 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i-----~~----~~------~~~~~~~~~~~   76 (280)
                      .++||+.++|+.|+++|++++|+||++. ..++.+++.+|+.++|.....     +.    +.      +...++.++++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~  170 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNS-FVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG  170 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence            5799999999999999999999999999 899999999999877762111     11    01      12238899999


Q ss_pred             hC---CCCccEEEEeCCcccccccccCCCeEEEEc
Q psy8911          77 TG---IEYKDMVFFDDEERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        77 ~g---~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~  108 (280)
                      +|   ++|++|++||||.+|+.+++++|+.++..+
T Consensus       171 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~  205 (232)
T 3fvv_A          171 MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANP  205 (232)
T ss_dssp             TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESC
T ss_pred             cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECc
Confidence            99   999999999999999999999999887643

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.36  E-value=1e-12  Score=103.87  Aligned_cols=83  Identities=10%  Similarity=0.184  Sum_probs=75.5

Q ss_pred             HHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911          20 ILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        20 ~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      +|+.|+++|++++|+||++. ..++..++.+++..+|+  .+  .++...|+.+++++|++|++|+||||+.+|+.+|++
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~-~~~~~~~~~~gl~~~~~--~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~  113 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKT-EIVRRRAEKLKVDYLFQ--GV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKR  113 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCC-HHHHHHHHHTTCSEEEC--SC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTT
T ss_pred             HHHHHHHCCCEEEEEeCCCh-HHHHHHHHHcCCCEeec--cc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence            69999999999999999999 89999999999999999  43  455666999999999999999999999999999999


Q ss_pred             CCCeEEEE
Q psy8911         100 LGVTCILV  107 (280)
Q Consensus       100 ~G~~~i~v  107 (280)
                      +|+.++..
T Consensus       114 ag~~~~~~  121 (164)
T 3e8m_A          114 VGIAGVPA  121 (164)
T ss_dssp             SSEEECCT
T ss_pred             CCCeEEcC
Confidence            99976643

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.36  E-value=4.3e-13  Score=122.08  Aligned_cols=98  Identities=11%  Similarity=0.168  Sum_probs=83.9

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc-----eec----------CCChhHHHH
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ-----IFP----------GQKTTHFAN   72 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~-----i~~----------~~~~~~~~~   72 (280)
                      ...++++||+.++|+.|+++|++++|+||++. ..++.+++.+|+..+|+...     +++          .++...|+.
T Consensus       252 ~~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~-~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~  330 (415)
T 3p96_A          252 AGQLELMPGARTTLRTLRRLGYACGVVSGGFR-RIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALRE  330 (415)
T ss_dssp             HHHCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHH
T ss_pred             HHhCccCccHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHH
Confidence            34578999999999999999999999999999 89999999999998887321     111          122233999


Q ss_pred             HHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          73 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        73 ~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      +++++|++|++|+||||+.+|+.+|+++|+.+++
T Consensus       331 ~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~  364 (415)
T 3p96_A          331 FAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF  364 (415)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence            9999999999999999999999999999998776

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.36  E-value=1.5e-12  Score=107.60  Aligned_cols=97  Identities=19%  Similarity=0.237  Sum_probs=84.3

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-cccceecC---------CChhHHHHHHHHhCC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-DHKQIFPG---------QKTTHFANLKKATGI   79 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d~~~i~~~---------~~~~~~~~~~~~~g~   79 (280)
                      .+.++||+.++|+.|+.   +++++||++. ...+..++.+++..+| +  .++++         ++...|+.+++++|+
T Consensus        85 ~~~~~~~~~~~l~~l~~---~~~i~s~~~~-~~~~~~l~~~~l~~~~~~--~~~~~~~~~~~~~kpk~~~~~~~~~~l~~  158 (229)
T 2fdr_A           85 DVKIIDGVKFALSRLTT---PRCICSNSSS-HRLDMMLTKVGLKPYFAP--HIYSAKDLGADRVKPKPDIFLHGAAQFGV  158 (229)
T ss_dssp             HCCBCTTHHHHHHHCCS---CEEEEESSCH-HHHHHHHHHTTCGGGTTT--CEEEHHHHCTTCCTTSSHHHHHHHHHHTC
T ss_pred             CCccCcCHHHHHHHhCC---CEEEEECCCh-hHHHHHHHhCChHHhccc--eEEeccccccCCCCcCHHHHHHHHHHcCC
Confidence            46789999999999874   9999999999 8899999999999999 7  44432         233459999999999


Q ss_pred             CCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|++|++|||+.+|+++|+++|+.++++.++..
T Consensus       159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~  191 (229)
T 2fdr_A          159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASH  191 (229)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTT
T ss_pred             ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCc
Confidence            999999999999999999999999999976543

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.36  E-value=1.2e-12  Score=113.17  Aligned_cols=89  Identities=12%  Similarity=0.122  Sum_probs=79.7

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDD   89 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D   89 (280)
                      ..+++||+.++|+.|+++|++++|+||++. ..++..++.+|+..+|+  .++..    ....++++++.. ++|+||||
T Consensus       161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~gl~~~f~--~i~~~----~K~~~~~~l~~~-~~~~~vGD  232 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNLDLVIA--EVLPH----QKSEEVKKLQAK-EVVAFVGD  232 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEEC--SCCTT----CHHHHHHHHTTT-CCEEEEEC
T ss_pred             ccccchhHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhCCceeee--ecChH----HHHHHHHHHhcC-CeEEEEEC
Confidence            457899999999999999999999999999 88999999999999999  56533    237889999999 99999999


Q ss_pred             CcccccccccCCCeEEEE
Q psy8911          90 EERNSHDVSPLGVTCILV  107 (280)
Q Consensus        90 ~~~~i~aa~~~G~~~i~v  107 (280)
                      +.+|+.+|+++|+. +.+
T Consensus       233 s~~Di~~a~~ag~~-v~~  249 (287)
T 3a1c_A          233 GINDAPALAQADLG-IAV  249 (287)
T ss_dssp             TTTCHHHHHHSSEE-EEE
T ss_pred             CHHHHHHHHHCCee-EEe
Confidence            99999999999997 444

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.35  E-value=1.3e-13  Score=112.66  Aligned_cols=98  Identities=14%  Similarity=0.076  Sum_probs=86.5

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh----hHHHHHHHHhCCCCccEE
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT----THFANLKKATGIEYKDMV   85 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~----~~~~~~~~~~g~~p~~~l   85 (280)
                      .+.++||+.++|++|++. |+++|+||++. ..++.+++.+++.++|+  .+++.+++    +.|.+.++.+|.+|++||
T Consensus        66 ~v~~RPgv~efL~~l~~~-~~i~I~Tss~~-~~a~~vl~~ld~~~~f~--~~l~rd~~~~~k~~~lK~L~~Lg~~~~~~v  141 (195)
T 2hhl_A           66 YVLKRPHVDEFLQRMGQL-FECVLFTASLA-KYADPVADLLDRWGVFR--ARLFRESCVFHRGNYVKDLSRLGRELSKVI  141 (195)
T ss_dssp             EEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHHHHHHHHCCSSCEE--EEECGGGCEEETTEEECCGGGSSSCGGGEE
T ss_pred             EEEeCcCHHHHHHHHHcC-CeEEEEcCCCH-HHHHHHHHHhCCcccEE--EEEEcccceecCCceeeeHhHhCCChhHEE
Confidence            368899999999999998 99999999999 99999999999999999  66655432    348889999999999999


Q ss_pred             EEeCCcccccccccCCCeEEEEcCCC
Q psy8911          86 FFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        86 ~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +|||++.++.++.++|+.+..+.+..
T Consensus       142 ivDDs~~~~~~~~~ngi~i~~~~~~~  167 (195)
T 2hhl_A          142 IVDNSPASYIFHPENAVPVQSWFDDM  167 (195)
T ss_dssp             EEESCGGGGTTCGGGEEECCCCSSCT
T ss_pred             EEECCHHHhhhCccCccEEeeecCCC
Confidence            99999999999999999987665543

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.34  E-value=1.6e-13  Score=113.60  Aligned_cols=93  Identities=12%  Similarity=0.154  Sum_probs=75.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc------eecCCC--hhHHHHHHHHhCCCCcc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ------IFPGQK--TTHFANLKKATGIEYKD   83 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~------i~~~~~--~~~~~~~~~~~g~~p~~   83 (280)
                      .++|++.++|+.|+++|++++|+||++. ...+..++.  +.++|+.+.      .+...+  +..|+.+++++|+    
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~-~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----  160 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSP-TKTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----  160 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCC-CSSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----
Confidence            4678999999999999999999999987 656666666  667787321      111222  3349999999998    


Q ss_pred             EEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |+||||+..|+.+|+++||++|++.++.
T Consensus       161 ~l~VGDs~~Di~aA~~aG~~~i~v~~g~  188 (211)
T 2b82_A          161 RIFYGDSDNDITAARDVGARGIRILRAS  188 (211)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred             EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence            9999999999999999999999997764

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.34  E-value=1.8e-12  Score=105.28  Aligned_cols=81  Identities=12%  Similarity=0.156  Sum_probs=75.1

Q ss_pred             HHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911          20 ILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        20 ~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      +|+.|+++|++++|+||++. ..++.+++.+|+.++|+  .+  .+|...++.+++++|++|++|+||||+.+|+.++++
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~lgl~~~f~--~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~  128 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKT-AIVERRAKSLGIEHLFQ--GR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRR  128 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCC-HHHHHHHHHHTCSEEEC--SC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred             HHHHHHHCCCEEEEEECcCh-HHHHHHHHHcCCHHHhc--Cc--CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHH
Confidence            89999999999999999999 89999999999999999  44  555667999999999999999999999999999999


Q ss_pred             CCCeEE
Q psy8911         100 LGVTCI  105 (280)
Q Consensus       100 ~G~~~i  105 (280)
                      +|+.++
T Consensus       129 ag~~~~  134 (189)
T 3mn1_A          129 VGLGMA  134 (189)
T ss_dssp             SSEEEE
T ss_pred             CCCeEE
Confidence            998754

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.34  E-value=5.1e-13  Score=118.11  Aligned_cols=98  Identities=14%  Similarity=0.144  Sum_probs=83.9

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccc-----eec----------CCChhHHHH
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ-----IFP----------GQKTTHFAN   72 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~-----i~~----------~~~~~~~~~   72 (280)
                      ...++++||+.++|+.|+++|++++|+||++. ..++.+++.+|+..+|+...     .+.          .++...|+.
T Consensus       174 ~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~-~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~  252 (335)
T 3n28_A          174 RETLPLMPELPELVATLHAFGWKVAIASGGFT-YFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLT  252 (335)
T ss_dssp             HTTCCCCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHH
T ss_pred             HHhCCcCcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHH
Confidence            44578999999999999999999999999999 89999999999998887321     111          123334999


Q ss_pred             HHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          73 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        73 ~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      +++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus       253 ~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~  286 (335)
T 3n28_A          253 LAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY  286 (335)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence            9999999999999999999999999999997776

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.33  E-value=2.4e-12  Score=106.47  Aligned_cols=82  Identities=9%  Similarity=0.137  Sum_probs=75.5

Q ss_pred             HHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911          20 ILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        20 ~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      +|+.|+++|++++|+||++. ..++.+++.+|+..+|+  .+  .++...++.+++++|++|++|++|||+.+|+.++++
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~-~~~~~~l~~lgi~~~f~--~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~  158 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRA-KLLEDRANTLGITHLYQ--GQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQ  158 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCC-HHHHHHHHHHTCCEEEC--SC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTT
T ss_pred             HHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCchhhc--cc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHH
Confidence            89999999999999999999 89999999999999999  44  556666999999999999999999999999999999


Q ss_pred             CCCeEEE
Q psy8911         100 LGVTCIL  106 (280)
Q Consensus       100 ~G~~~i~  106 (280)
                      +|+.++.
T Consensus       159 ag~~~a~  165 (211)
T 3ij5_A          159 VGLSVAV  165 (211)
T ss_dssp             SSEEEEC
T ss_pred             CCCEEEe
Confidence            9987653

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.32  E-value=4.1e-12  Score=107.66  Aligned_cols=96  Identities=19%  Similarity=0.303  Sum_probs=74.8

Q ss_pred             cCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhhCCCcccccc--------ceEecCCCHHHHHHHHHHcCCCCCc
Q psy8911         166 YYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQYFSN--------KEIYPGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       166 ~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~--------~~~~~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      .++++.+.++.|+++ |+++ ++||. ........+...++..+|+.        .....+||+..|..+++++|++|++
T Consensus       132 ~~~~~~~~l~~l~~~~~~~~-i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~  209 (271)
T 2x4d_A          132 SYQNMNNAFQVLMELEKPVL-ISLGK-GRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQ  209 (271)
T ss_dssp             CHHHHHHHHHHHHHCSSCCE-EEECC-CSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGG
T ss_pred             CHHHHHHHHHHHHhcCCCeE-EEEcC-CcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcce
Confidence            467788899999988 9998 77776 33322223344455555542        1233469999999999999999999


Q ss_pred             EEEEeCCc-CCcccccccCceEEEECCC
Q psy8911         237 MVFFDDEE-RNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       237 ~l~igD~~-~di~~a~~aG~~~i~v~~g  263 (280)
                      |++|||+. +|+.+|+++|+.+++|.+|
T Consensus       210 ~i~iGD~~~nDi~~a~~aG~~~~~v~~g  237 (271)
T 2x4d_A          210 AVMIGDDIVGDVGGAQRCGMRALQVRTG  237 (271)
T ss_dssp             EEEEESCTTTTHHHHHHTTCEEEEESST
T ss_pred             EEEECCCcHHHHHHHHHCCCcEEEEcCC
Confidence            99999998 9999999999999999887

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.32  E-value=2.1e-12  Score=103.81  Aligned_cols=82  Identities=13%  Similarity=0.023  Sum_probs=59.9

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcH-----HHHHHHHhh-CCCccccccceEecCCCHHHHHHHHHHcCCCCCc
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEI-----LHAKQILNL-INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~-----~~~~~~l~~-~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      .+.++||+.++|+.|+++ ++++|+||+ ..     ......++. +++..+|+.+.+  +.+.        ++    ++
T Consensus        67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~-~~~~~~~~~~~~~l~~~f~~~~~~~~i~~--~~~~--------~l----~~  130 (180)
T 3bwv_A           67 NLDVMPHAQEVVKQLNEH-YDIYIATAA-MDVPTSFHDKYEWLLEYFPFLDPQHFVFC--GRKN--------II----LA  130 (180)
T ss_dssp             SCCBCTTHHHHHHHHTTT-SEEEEEECC---CCSHHHHHHHHHHHHCTTSCGGGEEEC--SCGG--------GB----CC
T ss_pred             cCCCCcCHHHHHHHHHhc-CCEEEEeCC-CCcchHHHHHHHHHHHHcCCCCcccEEEe--CCcC--------ee----cc
Confidence            578999999999999985 999999998 31     122333444 677777775433  2221        11    78


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      |+|||||+.|+.  +++| ++++++++
T Consensus       131 ~l~ieDs~~~i~--~aaG-~~i~~~~~  154 (180)
T 3bwv_A          131 DYLIDDNPKQLE--IFEG-KSIMFTAS  154 (180)
T ss_dssp             SEEEESCHHHHH--HCSS-EEEEECCG
T ss_pred             cEEecCCcchHH--HhCC-CeEEeCCC
Confidence            999999999985  5689 99999865

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.31  E-value=2.3e-12  Score=104.94  Aligned_cols=95  Identities=18%  Similarity=0.224  Sum_probs=78.8

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceec---------------CCChhHHHHHH
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFP---------------GQKTTHFANLK   74 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~---------------~~~~~~~~~~~   74 (280)
                      ...++|++.++|+.|+++|++++++|+++. ..++..++.+++..+|+......               .++...++.++
T Consensus        74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~  152 (211)
T 1l7m_A           74 RITPTEGAEETIKELKNRGYVVAVVSGGFD-IAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA  152 (211)
T ss_dssp             TCCBCTTHHHHHHHHHHTTEEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEcCCcH-HHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHH
Confidence            356789999999999999999999999988 77888899999888876321110               11233499999


Q ss_pred             HHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          75 KATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        75 ~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      +++|++|++|++|||+.+|+.+|+++|+.++
T Consensus       153 ~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~  183 (211)
T 1l7m_A          153 KIEGINLEDTVAVGDGANDISMFKKAGLKIA  183 (211)
T ss_dssp             HHHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred             HHcCCCHHHEEEEecChhHHHHHHHCCCEEE
Confidence            9999999999999999999999999999744

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.30  E-value=3.3e-12  Score=102.84  Aligned_cols=90  Identities=14%  Similarity=0.140  Sum_probs=80.1

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcc
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEER   92 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~   92 (280)
                      +.+...++|+.|+++|++++++||.+. ..++..++.+++..+|+  .  ..++...|+.+++++|++|++|+||||+.+
T Consensus        36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~-~~~~~~~~~lgl~~~~~--~--~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~  110 (180)
T 1k1e_A           36 FHVRDGLGIKMLMDADIQVAVLSGRDS-PILRRRIADLGIKLFFL--G--KLEKETACFDLMKQAGVTAEQTAYIGDDSV  110 (180)
T ss_dssp             EEHHHHHHHHHHHHTTCEEEEEESCCC-HHHHHHHHHHTCCEEEE--S--CSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             eccchHHHHHHHHHCCCeEEEEeCCCc-HHHHHHHHHcCCceeec--C--CCCcHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            456788999999999999999999999 89999999999998887  3  244555699999999999999999999999


Q ss_pred             cccccccCCCeEEEE
Q psy8911          93 NSHDVSPLGVTCILV  107 (280)
Q Consensus        93 ~i~aa~~~G~~~i~v  107 (280)
                      |+.+++++|+.++..
T Consensus       111 Di~~~~~ag~~~~~~  125 (180)
T 1k1e_A          111 DLPAFAACGTSFAVA  125 (180)
T ss_dssp             GHHHHHHSSEEEECT
T ss_pred             HHHHHHHcCCeEEeC
Confidence            999999999987743

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.29  E-value=6.3e-12  Score=101.96  Aligned_cols=84  Identities=10%  Similarity=0.140  Sum_probs=76.0

Q ss_pred             HHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcccccccc
Q psy8911          19 GILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVS   98 (280)
Q Consensus        19 ~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~   98 (280)
                      .+|+.|+++|++++|+||++. ..++..++.+|+..+|+  .  ..++...|+.+++++|++|++|+||||+.+|+.+|+
T Consensus        60 ~~l~~L~~~g~~v~ivT~~~~-~~~~~~l~~lgl~~~~~--~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~  134 (188)
T 2r8e_A           60 YGIRCALTSDIEVAIITGRKA-KLVEDRCATLGITHLYQ--G--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVME  134 (188)
T ss_dssp             HHHHHHHTTTCEEEEECSSCC-HHHHHHHHHHTCCEEEC--S--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHT
T ss_pred             HHHHHHHHCCCeEEEEeCCCh-HHHHHHHHHcCCceeec--C--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence            479999999999999999999 89999999999998888  3  255667799999999999999999999999999999


Q ss_pred             cCCCeEEEE
Q psy8911          99 PLGVTCILV  107 (280)
Q Consensus        99 ~~G~~~i~v  107 (280)
                      ++|+.+++.
T Consensus       135 ~ag~~~~~~  143 (188)
T 2r8e_A          135 KVGLSVAVA  143 (188)
T ss_dssp             TSSEEEECT
T ss_pred             HCCCEEEec
Confidence            999988643

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.29  E-value=2.7e-12  Score=116.80  Aligned_cols=91  Identities=16%  Similarity=0.283  Sum_probs=77.0

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCC---------c--hHHHHHHHhhcCccccccccceecCCC-------hhHHHHH
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTS---------E--IQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANL   73 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~---------~--~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~   73 (280)
                      .++||+.++|+.|+++|++++|+||++         .  ...++..++.+|+.  |+  .++++++       ++.|+.+
T Consensus        87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd--~i~~~~~~~~~KP~p~~~~~a  162 (416)
T 3zvl_A           87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQ--VLVATHAGLNRKPVSGMWDHL  162 (416)
T ss_dssp             ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CE--EEEECSSSTTSTTSSHHHHHH
T ss_pred             hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EE--EEEECCCCCCCCCCHHHHHHH
Confidence            489999999999999999999999976         1  02367889999983  88  6666543       3459999


Q ss_pred             HHHhC----CCCccEEEEeCCc-----------------ccccccccCCCeEEE
Q psy8911          74 KKATG----IEYKDMVFFDDEE-----------------RNSHDVSPLGVTCIL  106 (280)
Q Consensus        74 ~~~~g----~~p~~~l~v~D~~-----------------~~i~aa~~~G~~~i~  106 (280)
                      ++++|    ++|++|+||||+.                 .|+.+|+++|+..+.
T Consensus       163 ~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~  216 (416)
T 3zvl_A          163 QEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFAT  216 (416)
T ss_dssp             HHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred             HHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccC
Confidence            99997    9999999999997                 799999999999774

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.29  E-value=1e-11  Score=101.42  Aligned_cols=86  Identities=8%  Similarity=0.047  Sum_probs=76.3

Q ss_pred             CCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcccc
Q psy8911          15 PDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNS   94 (280)
Q Consensus        15 ~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i   94 (280)
                      +.-...|+.|+++|++++|+||++. ..++.+++.+|+..+|+  .+  .++...++.+++++|++|++|++|||+.+|+
T Consensus        55 ~~d~~~l~~L~~~G~~~~ivT~~~~-~~~~~~l~~lgi~~~~~--~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi  129 (195)
T 3n07_A           55 TRDGYGVKALMNAGIEIAIITGRRS-QIVENRMKALGISLIYQ--GQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDW  129 (195)
T ss_dssp             TTHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHHTTCCEEEC--SC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGH
T ss_pred             cccHHHHHHHHHCCCEEEEEECcCH-HHHHHHHHHcCCcEEee--CC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence            3344459999999999999999999 89999999999999998  43  4555669999999999999999999999999


Q ss_pred             cccccCCCeEE
Q psy8911          95 HDVSPLGVTCI  105 (280)
Q Consensus        95 ~aa~~~G~~~i  105 (280)
                      .+++++|+.++
T Consensus       130 ~~~~~ag~~va  140 (195)
T 3n07_A          130 PVMEKVALRVC  140 (195)
T ss_dssp             HHHTTSSEEEE
T ss_pred             HHHHHCCCEEE
Confidence            99999998755

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.28  E-value=1e-11  Score=103.85  Aligned_cols=45  Identities=20%  Similarity=0.298  Sum_probs=40.7

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +|+..+..+++++|++|+++++|||+.+|+..++.+|+. +.+.++
T Consensus       153 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~  197 (231)
T 1wr8_A          153 NKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQA  197 (231)
T ss_dssp             CHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecCC
Confidence            677889999999999999999999999999999999998 566654

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.28  E-value=8.3e-12  Score=101.60  Aligned_cols=80  Identities=16%  Similarity=0.307  Sum_probs=74.6

Q ss_pred             HHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCcccccccccC
Q psy8911          21 LKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPL  100 (280)
Q Consensus        21 l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~  100 (280)
                      |+.|+++|++++|+||++. ..++..++.+|+..+|+  .+  .++...++.+++++|++|++|+||||+.+|+.+++++
T Consensus        55 l~~L~~~g~~~~ivTn~~~-~~~~~~l~~lgl~~~~~--~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~a  129 (191)
T 3n1u_A           55 LKLLMAAGIQVAIITTAQN-AVVDHRMEQLGITHYYK--GQ--VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQV  129 (191)
T ss_dssp             HHHHHHTTCEEEEECSCCS-HHHHHHHHHHTCCEEEC--SC--SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             HHHHHHCCCeEEEEeCcCh-HHHHHHHHHcCCcccee--CC--CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHC
Confidence            9999999999999999999 89999999999999999  44  5667779999999999999999999999999999999


Q ss_pred             CCeEE
Q psy8911         101 GVTCI  105 (280)
Q Consensus       101 G~~~i  105 (280)
                      |+.++
T Consensus       130 g~~~~  134 (191)
T 3n1u_A          130 GLGVA  134 (191)
T ss_dssp             SEEEE
T ss_pred             CCEEE
Confidence            99874

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.28  E-value=2.8e-12  Score=110.71  Aligned_cols=97  Identities=13%  Similarity=0.206  Sum_probs=77.0

Q ss_pred             ccCCCHHHHHHHHhhC-CcEEEEEcCCC--------------------cHHHHHHHHhhCCCccccccc-----------
Q psy8911         165 KYYRGVPEILRYLKEN-KCLVAAASRTS--------------------EILHAKQILNLINLNQYFSNK-----------  212 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~-g~~~~i~T~~~--------------------~~~~~~~~l~~~gl~~~f~~~-----------  212 (280)
                      ..++++.++|+.|+++ |+++++.|+..                    ....+...++.+|+..+|...           
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence            3567899999999988 99999999751                    234567788888998777532           


Q ss_pred             --eEec--CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         213 --EIYP--GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       213 --~~~~--~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                        .+.+  .+|+..+..+++++|++|++|++|||+.+|+.+++++|+. +.+.+
T Consensus       202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~-~~~~~  254 (289)
T 3gyg_A          202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNG-YLLKN  254 (289)
T ss_dssp             EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEE-EECTT
T ss_pred             EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcE-EEECC
Confidence              1222  3778899999999999999999999999999999999966 44444

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=99.27  E-value=8.2e-13  Score=106.69  Aligned_cols=95  Identities=11%  Similarity=0.042  Sum_probs=83.7

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh----hHHHHHHHHhCCCCccEE
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT----THFANLKKATGIEYKDMV   85 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~----~~~~~~~~~~g~~p~~~l   85 (280)
                      .+.++||+.++|+.|++. |+++|+||++. ..++.+++.++..++|+  .+++.+++    +.|.+.++.+|.+|++|+
T Consensus        53 ~v~~rPg~~efL~~l~~~-~~i~I~T~~~~-~~a~~vl~~ld~~~~f~--~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~v  128 (181)
T 2ght_A           53 YVLKRPHVDEFLQRMGEL-FECVLFTASLA-KYADPVADLLDKWGAFR--ARLFRESCVFHRGNYVKDLSRLGRDLRRVL  128 (181)
T ss_dssp             EEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHHHHHHHHCTTCCEE--EEECGGGSEEETTEEECCGGGTCSCGGGEE
T ss_pred             EEEeCCCHHHHHHHHHhC-CCEEEEcCCCH-HHHHHHHHHHCCCCcEE--EEEeccCceecCCcEeccHHHhCCCcceEE
Confidence            468899999999999998 99999999999 99999999999999999  55554432    348888999999999999


Q ss_pred             EEeCCcccccccccCCCeEEEEc
Q psy8911          86 FFDDEERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        86 ~v~D~~~~i~aa~~~G~~~i~v~  108 (280)
                      +|||++.++.++.++|+.+.-+.
T Consensus       129 ivdDs~~~~~~~~~ngi~i~~~~  151 (181)
T 2ght_A          129 ILDNSPASYVFHPDNAVPVASWF  151 (181)
T ss_dssp             EECSCGGGGTTCTTSBCCCCCCS
T ss_pred             EEeCCHHHhccCcCCEeEecccc
Confidence            99999999999999999865443

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.92  E-value=4.4e-13  Score=114.65  Aligned_cols=91  Identities=12%  Similarity=0.170  Sum_probs=81.0

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEe
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~   88 (280)
                      ...+++||+.++|+.|+++|++++++||.+. ..++.+++.+|+.++|+  .+.    +..+..++++++.+|++|+|||
T Consensus       133 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~~gl~~~f~--~~~----p~~k~~~~~~l~~~~~~~~~VG  205 (263)
T 2yj3_A          133 ISDVPRPNLKDYLEKLKNEGLKIIILSGDKE-DKVKELSKELNIQEYYS--NLS----PEDKVRIIEKLKQNGNKVLMIG  205 (263)
Confidence            3457999999999999999999999999999 89999999999999999  555    2346789999999999999999


Q ss_pred             CCcccccccccCCCeEEE
Q psy8911          89 DEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        89 D~~~~i~aa~~~G~~~i~  106 (280)
                      |+.+|+.+|+++|+.+.+
T Consensus       206 D~~~D~~aa~~Agv~va~  223 (263)
T 2yj3_A          206 DGVNDAAALALADVSVAM  223 (263)
Confidence            999999999999975443

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.92  E-value=4.6e-13  Score=114.55  Aligned_cols=89  Identities=12%  Similarity=0.116  Sum_probs=79.5

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDD  242 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD  242 (280)
                      ...++||+.++|+.|+++|++++++||+ ....++..++++|+.++|+.+.      |+.+..++++++.+|++|+||||
T Consensus       134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~-~~~~~~~~~~~~gl~~~f~~~~------p~~k~~~~~~l~~~~~~~~~VGD  206 (263)
T 2yj3_A          134 SDVPRPNLKDYLEKLKNEGLKIIILSGD-KEDKVKELSKELNIQEYYSNLS------PEDKVRIIEKLKQNGNKVLMIGD  206 (263)
Confidence            4568999999999999999999999999 8889999999999999998643      34567888999999999999999


Q ss_pred             CcCCcccccccCceEE
Q psy8911         243 EERNSHDVSPLGVTCI  258 (280)
Q Consensus       243 ~~~di~~a~~aG~~~i  258 (280)
                      +.+|+.+++++|+.+.
T Consensus       207 ~~~D~~aa~~Agv~va  222 (263)
T 2yj3_A          207 GVNDAAALALADVSVA  222 (263)
Confidence            9999999999997533

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.26  E-value=2.5e-13  Score=117.04  Aligned_cols=94  Identities=14%  Similarity=0.170  Sum_probs=76.4

Q ss_pred             CCHHHHHHHHHHCCceEEEecCCCchHHH--H--HHHhhcCccccccccceecC-------CChhHHHHHHHHh----CC
Q psy8911          15 PDVPGILKYLKQNNCLVAAASRTSEIQGA--Q--QLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKAT----GI   79 (280)
Q Consensus        15 ~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~--~--~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~----g~   79 (280)
                      +...++++.|+++|++ +|+||++. ...  +  .+++..++.++|+  .++++       ++...|+.+++++    |+
T Consensus       148 ~~~~~l~~~L~~~g~~-~i~tn~~~-~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~  223 (284)
T 2hx1_A          148 HDLNKTVNLLRKRTIP-AIVANTDN-TYPLTKTDVAIAIGGVATMIE--SILGRRFIRFGKPDSQMFMFAYDMLRQKMEI  223 (284)
T ss_dssp             HHHHHHHHHHHHCCCC-EEEECCCS-EEECSSSCEEECHHHHHHHHH--HHHCSCEEEESTTSSHHHHHHHHHHHTTSCC
T ss_pred             ccHHHHHHHHhcCCCe-EEEECCCc-cccCcCCCccccCChHHHHHH--HHhCCceeEecCCCHHHHHHHHHHHhhccCC
Confidence            3566677799999999 99999988 544  3  2246678889998  45443       3344599999999    99


Q ss_pred             CCccEEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911          80 EYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        80 ~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|++|+||||++ .|+.+|+++||+++++.++..
T Consensus       224 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~  257 (284)
T 2hx1_A          224 SKREILMVGDTLHTDILGGNKFGLDTALVLTGNT  257 (284)
T ss_dssp             CGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSS
T ss_pred             CcceEEEECCCcHHHHHHHHHcCCeEEEECCCCC
Confidence            999999999995 999999999999999987754

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.26  E-value=2.8e-13  Score=115.33  Aligned_cols=99  Identities=14%  Similarity=0.161  Sum_probs=78.2

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHH--HHH-HHhhcCccccccccceecC-------CChhHHHHHHHHhC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQG--AQQ-LLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATG   78 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~--~~~-~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g   78 (280)
                      ....+|||+.++|+.|+ +|+++ |+||++. ..  .+. +++..++..+|+  .++++       +++..|+.+++++|
T Consensus       123 ~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~-~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~KP~p~~~~~~~~~~~  197 (264)
T 1yv9_A          123 DTELSYEKVVLATLAIQ-KGALF-IGTNPDK-NIPTERGLLPGAGSVVTFVE--TATQTKPVYIGKPKAIIMERAIAHLG  197 (264)
T ss_dssp             CTTCCHHHHHHHHHHHH-TTCEE-EESCCCS-EEEETTEEEECHHHHHHHHH--HHHTCCCEECSTTSHHHHHHHHHHHC
T ss_pred             CCCcCHHHHHHHHHHHh-CCCEE-EEECCCC-cccCCCCcccCCcHHHHHHH--HHhCCCccccCCCCHHHHHHHHHHcC
Confidence            34568999999999997 89998 9999887 32  122 233445777888  44433       23345999999999


Q ss_pred             CCCccEEEEeCC-cccccccccCCCeEEEEcCCCc
Q psy8911          79 IEYKDMVFFDDE-ERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        79 ~~p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|++|+||||+ .+|+.+|+++|+.+++|.++..
T Consensus       198 ~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~  232 (264)
T 1yv9_A          198 VEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFT  232 (264)
T ss_dssp             SCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSS
T ss_pred             CCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCC
Confidence            999999999999 5999999999999999987654

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.24  E-value=1.3e-11  Score=103.09  Aligned_cols=115  Identities=13%  Similarity=0.059  Sum_probs=90.7

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      |.+++.+|+||||++.                    .  -.+-|.+.+.|++|+++|++++++|+. ....+...++.++
T Consensus         4 m~kli~~DlDGTLl~~--------------------~--~~i~~~~~~~l~~l~~~g~~~~i~TGr-~~~~~~~~~~~l~   60 (227)
T 1l6r_A            4 MIRLAAIDVDGNLTDR--------------------D--RLISTKAIESIRSAEKKGLTVSLLSGN-VIPVVYALKIFLG   60 (227)
T ss_dssp             CCCEEEEEHHHHSBCT--------------------T--SCBCHHHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHT
T ss_pred             ceEEEEEECCCCCcCC--------------------C--CcCCHHHHHHHHHHHHCCCEEEEECCC-CcHHHHHHHHHhC
Confidence            4689999999999862                    1  124477899999999999999999999 8888888888888


Q ss_pred             Cccc---------cc--cceE-----------------------------------------------------------
Q psy8911         205 LNQY---------FS--NKEI-----------------------------------------------------------  214 (280)
Q Consensus       205 l~~~---------f~--~~~~-----------------------------------------------------------  214 (280)
                      +..+         ++  ...+                                                           
T Consensus        61 ~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (227)
T 1l6r_A           61 INGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFY  140 (227)
T ss_dssp             CCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEE
T ss_pred             CCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEe
Confidence            7642         11  1111                                                           


Q ss_pred             -------ec--CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         215 -------YP--GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       215 -------~~--~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                             .+  .+|...+..++++++++++++++|||+.+|+..++.+|+. +.+.++
T Consensus       141 ~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n~  197 (227)
T 1l6r_A          141 SGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANA  197 (227)
T ss_dssp             ETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTS
T ss_pred             cCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCce-EEecCc
Confidence                   11  2556778999999999999999999999999999999986 556554

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.24  E-value=6.4e-12  Score=102.64  Aligned_cols=98  Identities=13%  Similarity=0.146  Sum_probs=77.5

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc--ccccccceecC---------CCh---hHHHHHHHH
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN--QYFDHKQIFPG---------QKT---THFANLKKA   76 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~--~~fd~~~i~~~---------~~~---~~~~~~~~~   76 (280)
                      ..++||+.++|+.|+++|++++|+||++. ..++..++.+++.  .+|....++++         .++   .....+++.
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  159 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGLS-ESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA  159 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence            45899999999999999999999999999 8999999999984  46652122211         111   125555566


Q ss_pred             hCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          77 TGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        77 ~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      +|++|++|++|||+.+|+.++ ++|+.++++..+
T Consensus       160 ~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~  192 (219)
T 3kd3_A          160 KGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYM  192 (219)
T ss_dssp             GGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEEC
T ss_pred             hCCCCCCEEEEECCHhHHHHH-hCCCCcEEEecc
Confidence            799999999999999999998 689998877554

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.23  E-value=1.5e-11  Score=98.67  Aligned_cols=80  Identities=9%  Similarity=0.092  Sum_probs=72.3

Q ss_pred             HHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911          20 ILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        20 ~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      +|+.|+++|++++|+||++. ..++.+++.+++. +|+  ..  .++...++.+++++|++|++|+||||+.+|+.++++
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~-~~~~~~~~~lgi~-~~~--~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~  120 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQN-PVVAARARKLKIP-VLH--GI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFAL  120 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCC-HHHHHHHHHHTCC-EEE--SC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred             HHHHHHHCCCeEEEEECcCh-HHHHHHHHHcCCe-eEe--CC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH
Confidence            69999999999999999999 8999999999998 777  33  455666999999999999999999999999999999


Q ss_pred             CCCeEE
Q psy8911         100 LGVTCI  105 (280)
Q Consensus       100 ~G~~~i  105 (280)
                      +|+.++
T Consensus       121 ag~~v~  126 (176)
T 3mmz_A          121 VGWPVA  126 (176)
T ss_dssp             SSEEEE
T ss_pred             CCCeEE
Confidence            997654

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=99.23  E-value=9.9e-12  Score=110.45  Aligned_cols=86  Identities=10%  Similarity=0.071  Sum_probs=61.2

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCc---hHHHHHHHhhcCccccccccceecCCChhH-HHHHHHHhCCCCccEEEE
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSE---IQGAQQLLDLFNWNQYFDHKQIFPGQKTTH-FANLKKATGIEYKDMVFF   87 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~---~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~-~~~~~~~~g~~p~~~l~v   87 (280)
                      .++||+.++|+.|+++|+++.++||++.   ...++.+.+.+|+.--.+  .|+.+..... |.   +    ....++++
T Consensus        29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~--~i~ts~~~~~~~~---~----~~~~v~vi   99 (352)
T 3kc2_A           29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPL--QIIQSHTPYKSLV---N----KYSRILAV   99 (352)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGG--GEECTTGGGGGGT---T----TCSEEEEE
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChh--hEeehHHHHHHHH---h----cCCEEEEE
Confidence            6789999999999999999999999862   134444444688865556  7887765432 32   1    23567777


Q ss_pred             eCCcccccccccCCCeEEEE
Q psy8911          88 DDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        88 ~D~~~~i~aa~~~G~~~i~v  107 (280)
                      |-. .-.+.++++|++.+..
T Consensus       100 G~~-~l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A          100 GTP-SVRGVAEGYGFQDVVH  118 (352)
T ss_dssp             SST-THHHHHHHHTCSEEEE
T ss_pred             CCH-HHHHHHHhCCCeEecc
Confidence            754 4467778899998864

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.22  E-value=1.9e-12  Score=109.38  Aligned_cols=97  Identities=12%  Similarity=0.105  Sum_probs=80.6

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc-cee-------cCCChhHHHHHHHHhCCCCcc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK-QIF-------PGQKTTHFANLKKATGIEYKD   83 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~-~i~-------~~~~~~~~~~~~~~~g~~p~~   83 (280)
                      .++|++.++++.|+ +|+++ ++||.+. ......+..+++.++|+.. .+.       ..++...|+.+++++|++|++
T Consensus       122 ~~~~~~~~~l~~l~-~~~~~-i~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~  198 (259)
T 2ho4_A          122 FHYQLLNQAFRLLL-DGAPL-IAIHKAR-YYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEE  198 (259)
T ss_dssp             CBHHHHHHHHHHHH-TTCCE-EESCCCS-EEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGG
T ss_pred             CCHHHHHHHHHHHH-CCCEE-EEECCCC-cCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHH
Confidence            47899999999999 89999 9999987 5556667778888888621 111       233445599999999999999


Q ss_pred             EEEEeCCc-ccccccccCCCeEEEEcCCC
Q psy8911          84 MVFFDDEE-RNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        84 ~l~v~D~~-~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|||+. +|+.+|+++|++++++.++.
T Consensus       199 ~~~iGD~~~~Di~~a~~aG~~~i~v~~g~  227 (259)
T 2ho4_A          199 AVMIGDDCRDDVDGAQNIGMLGILVKTGK  227 (259)
T ss_dssp             EEEEESCTTTTHHHHHHTTCEEEEESSTT
T ss_pred             EEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence            99999998 99999999999999998763

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.20  E-value=1.1e-10  Score=100.48  Aligned_cols=41  Identities=12%  Similarity=0.186  Sum_probs=36.8

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEE
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  258 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i  258 (280)
                      +|...+..+++++|++|+++++|||+.+|++.++.+|+.++
T Consensus       202 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va  242 (290)
T 3dnp_A          202 SKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVA  242 (290)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             CHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEE
Confidence            46677899999999999999999999999999999998543

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.19  E-value=7.8e-11  Score=100.88  Aligned_cols=39  Identities=13%  Similarity=0.201  Sum_probs=36.3

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                      +|+..++.+++++|++|+++++|||+.+|++.++.+|+.
T Consensus       197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~  235 (279)
T 4dw8_A          197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMG  235 (279)
T ss_dssp             CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcE
Confidence            567889999999999999999999999999999999964

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.18  E-value=3.2e-12  Score=108.39  Aligned_cols=132  Identities=14%  Similarity=0.177  Sum_probs=88.7

Q ss_pred             ceeEEEecCCCCCCccccc--cc---CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc---HHHH
Q psy8911         126 SNHLSKKLDYTLWPLHVHD--LV---APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE---ILHA  196 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~--~~---~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~---~~~~  196 (280)
                      +.+++||+||||++.....  ..   .+|.... .....  .....++||+.++|+.|+++|++++|+||++.   +..+
T Consensus        58 ~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~--~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T  135 (262)
T 3ocu_A           58 KKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVD--ARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGT  135 (262)
T ss_dssp             EEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHH--HTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHH
T ss_pred             CeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHH--cCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHH
Confidence            4689999999999864321  10   1121000 00001  13578999999999999999999999999832   2578


Q ss_pred             HHHHhhCCCccccc-cceEec--CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccccc--------c---------cCce
Q psy8911         197 KQILNLINLNQYFS-NKEIYP--GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVS--------P---------LGVT  256 (280)
Q Consensus       197 ~~~l~~~gl~~~f~-~~~~~~--~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~--------~---------aG~~  256 (280)
                      ...|+.+||..+++ .+...+  ..|...+..+.+. |.  .-+++|||+..|+.++.        +         .|-+
T Consensus       136 ~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~-Gy--~iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~  212 (262)
T 3ocu_A          136 IDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQ-GY--EIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKT  212 (262)
T ss_dssp             HHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHT-TE--EEEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTTT
T ss_pred             HHHHHHcCcCcccccceeccCCCCChHHHHHHHHhc-CC--CEEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCCC
Confidence            88999999998774 232322  2455555555554 43  34999999999999833        2         5777


Q ss_pred             EEEECC
Q psy8911         257 CIHVKK  262 (280)
Q Consensus       257 ~i~v~~  262 (280)
                      .|..|+
T Consensus       213 ~ivlPN  218 (262)
T 3ocu_A          213 FIMLPN  218 (262)
T ss_dssp             EEECCC
T ss_pred             EEEeCC
Confidence            777764

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.17  E-value=3.8e-12  Score=107.77  Aligned_cols=131  Identities=15%  Similarity=0.135  Sum_probs=87.5

Q ss_pred             eeEEEecCCCCCCccccc--cc---CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc---HHHHH
Q psy8911         127 NHLSKKLDYTLWPLHVHD--LV---APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE---ILHAK  197 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~--~~---~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~---~~~~~  197 (280)
                      .+++||+||||++.....  ..   .+|.... ....  .....+++||+.++|+.|+++|++++|+||++.   ++.+.
T Consensus        59 ~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv--~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~  136 (260)
T 3pct_A           59 KAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWV--DARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTV  136 (260)
T ss_dssp             EEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHH--HTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHH
T ss_pred             CEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHH--HcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHH
Confidence            489999999999864321  10   1121100 0011  123478999999999999999999999999932   25788


Q ss_pred             HHHhhCCCccccc-cceEec-C-CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccc--------cc---------cCceE
Q psy8911         198 QILNLINLNQYFS-NKEIYP-G-PKTTHFESLKKATGIEYKDMVFFDDEERNSHDV--------SP---------LGVTC  257 (280)
Q Consensus       198 ~~l~~~gl~~~f~-~~~~~~-~-~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a--------~~---------aG~~~  257 (280)
                      ..|+.+||..+++ .+...+ . .|...+..+ ++.|.  .-+++|||+..|+.++        ++         .|-+.
T Consensus       137 ~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L-~~~gy--~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~  213 (260)
T 3pct_A          137 DDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQV-EDMGY--DIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKF  213 (260)
T ss_dssp             HHHHHHTCCCCSTTTEEEESSCSSSHHHHHHH-HTTTC--EEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTE
T ss_pred             HHHHHcCcCccccceeEecCCCCChHHHHHHH-HhcCC--CEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCE
Confidence            8999999998875 332332 3 343444444 44343  4499999999999982        22         57777


Q ss_pred             EEECC
Q psy8911         258 IHVKK  262 (280)
Q Consensus       258 i~v~~  262 (280)
                      |..|+
T Consensus       214 ivlPN  218 (260)
T 3pct_A          214 IVLPN  218 (260)
T ss_dssp             EECCC
T ss_pred             EEeCC
Confidence            77764

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.16  E-value=2.8e-12  Score=109.36  Aligned_cols=97  Identities=7%  Similarity=0.046  Sum_probs=77.6

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHH--HHHHhh-cCccccccccceecC-------CChhHHHHHHHHhCC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGA--QQLLDL-FNWNQYFDHKQIFPG-------QKTTHFANLKKATGI   79 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~--~~~l~~-~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~   79 (280)
                      ...+||++.++++.|+ +|+++ |+||+.. ...  ...+.. .++..+|+  .++++       ++...|+.++++  +
T Consensus       128 ~~~~~~~~~~~l~~L~-~g~~~-i~tn~~~-~~~~~~~~l~~~~~l~~~~~--~~~~~~~~~~~KP~~~~~~~~~~~--~  200 (263)
T 1zjj_A          128 PDLTYEKLKYATLAIR-NGATF-IGTNPDA-TLPGEEGIYPGAGSIIAALK--VATNVEPIIIGKPNEPMYEVVREM--F  200 (263)
T ss_dssp             TTCBHHHHHHHHHHHH-TTCEE-EESCCCS-EEEETTEEEECHHHHHHHHH--HHHCCCCEECSTTSHHHHHHHHHH--S
T ss_pred             CCCCHHHHHHHHHHHH-CCCEE-EEECCCc-cccCCCCCcCCcHHHHHHHH--HHhCCCccEecCCCHHHHHHHHHh--C
Confidence            4578999999999999 89999 9999987 444  233444 56777888  44432       334459999998  9


Q ss_pred             CCccEEEEeCCc-ccccccccCCCeEEEEcCCCch
Q psy8911          80 EYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        80 ~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      +|++|+||||+. .|+.+|+++|+.+++|.++...
T Consensus       201 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~  235 (263)
T 1zjj_A          201 PGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSS  235 (263)
T ss_dssp             TTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCC
T ss_pred             CcccEEEECCChHHHHHHHHHcCCeEEEECCCCCC
Confidence            999999999995 9999999999999999877543

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.15  E-value=5e-12  Score=105.48  Aligned_cols=102  Identities=11%  Similarity=0.094  Sum_probs=81.3

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEE---------------------------------EecCCCchHHHHHHHhhcC-cc
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVA---------------------------------AASRTSEIQGAQQLLDLFN-WN   53 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~---------------------------------i~Sn~~~~~~~~~~l~~~~-l~   53 (280)
                      .....++||+.++++.|+++|++++                                 ++||.+.  ..+..++.++ +.
T Consensus        83 ~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~~--~~~~~~~~~~~~~  160 (250)
T 2c4n_A           83 EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDT--HGRGFYPACGALC  160 (250)
T ss_dssp             SCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCCS--BSSTTCBCHHHHH
T ss_pred             CCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCCC--CCCCeeecchHHH
Confidence            4557889999999999999999999                                 9998762  2344455555 55


Q ss_pred             cccccccee-------cCCChhHHHHHHHHhCCCCccEEEEeCC-cccccccccCCCeEEEEcCCCch
Q psy8911          54 QYFDHKQIF-------PGQKTTHFANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        54 ~~fd~~~i~-------~~~~~~~~~~~~~~~g~~p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      .+|+  .+.       ..++...|+.+++++|++|++|++|||+ .+|+++|+++|+.+++|.++...
T Consensus       161 ~~~~--~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~  226 (250)
T 2c4n_A          161 AGIE--KISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSS  226 (250)
T ss_dssp             HHHH--HHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCC
T ss_pred             HHHH--HHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCC
Confidence            6666  222       2345556999999999999999999999 69999999999999999877543

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.15  E-value=4.9e-11  Score=101.63  Aligned_cols=44  Identities=20%  Similarity=0.299  Sum_probs=38.4

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +|...+..+++++|++|+++++|||+.+|++.++.+|+.+ .+.+
T Consensus       200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~v-am~n  243 (274)
T 3fzq_A          200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTI-AMKN  243 (274)
T ss_dssp             SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEE-EETT
T ss_pred             CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceE-EecC
Confidence            5678899999999999999999999999999999999643 3443

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.15  E-value=4.2e-11  Score=102.15  Aligned_cols=83  Identities=12%  Similarity=0.216  Sum_probs=74.7

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      +++||+.++|+.|+++|++++|+||++. ..++..++.+|+.++|+  .+.++++....+...+.+     +|++|||+.
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~-~~~~~~~~~~gl~~~f~--~~~~~~k~~~~k~~~~~~-----~~~~vGD~~  215 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNR-FVAKWVAEELGLDDYFA--EVLPHEKAEKVKEVQQKY-----VTAMVGDGV  215 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEEC--SCCGGGHHHHHHHHHTTS-----CEEEEECTT
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCChhHhH--hcCHHHHHHHHHHHHhcC-----CEEEEeCCc
Confidence            7899999999999999999999999999 89999999999999999  788777666555555544     899999999


Q ss_pred             ccccccccCCC
Q psy8911          92 RNSHDVSPLGV  102 (280)
Q Consensus        92 ~~i~aa~~~G~  102 (280)
                      +|+.+++++|+
T Consensus       216 nDi~~~~~Ag~  226 (280)
T 3skx_A          216 NDAPALAQADV  226 (280)
T ss_dssp             TTHHHHHHSSE
T ss_pred             hhHHHHHhCCc
Confidence            99999999996

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.14  E-value=2.6e-12  Score=112.03  Aligned_cols=101  Identities=10%  Similarity=0.074  Sum_probs=80.8

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHH--H-HHHhhcC-ccccccccceec-------CCChhHHHHHHHHh
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGA--Q-QLLDLFN-WNQYFDHKQIFP-------GQKTTHFANLKKAT   77 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~--~-~~l~~~~-l~~~fd~~~i~~-------~~~~~~~~~~~~~~   77 (280)
                      ....+||++.++++.|+++|+ ++++||.+. ...  . ..+..+| +..+|+  .+++       .++...|+.+++++
T Consensus       153 ~~~~~~~~~~~~l~~l~~~g~-~~i~tn~~~-~~~~~~~~~~~~~g~l~~~~~--~~~~~~~~~~~KP~~~~~~~~~~~l  228 (306)
T 2oyc_A          153 DEHFSFAKLREACAHLRDPEC-LLVATDRDP-WHPLSDGSRTPGTGSLAAAVE--TASGRQALVVGKPSPYMFECITENF  228 (306)
T ss_dssp             CTTCCHHHHHHHHHHHTSTTS-EEEESCCCC-EEECTTSCEEECHHHHHHHHH--HHHTCCCEECSTTSTHHHHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHHHcCCC-EEEEEcCCc-cccCCCCCcCCCCcHHHHHHH--HHhCCCceeeCCCCHHHHHHHHHHc
Confidence            345678999999999999999 999999987 433  2 3444555 667777  3332       23445699999999


Q ss_pred             CCCCccEEEEeCCc-ccccccccCCCeEEEEcCCCch
Q psy8911          78 GIEYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        78 g~~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      |++|++|++|||+. +|+++|+++|+.+++|.++...
T Consensus       229 gi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~  265 (306)
T 2oyc_A          229 SIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSR  265 (306)
T ss_dssp             CCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCC
T ss_pred             CCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCC
Confidence            99999999999996 9999999999999999887543

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.12  E-value=7.2e-11  Score=101.10  Aligned_cols=39  Identities=15%  Similarity=0.250  Sum_probs=34.0

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                      +|+..++.+++++|++|+++++|||+.+|++.++.+|+.
T Consensus       197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~  235 (279)
T 3mpo_A          197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLG  235 (279)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEE
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCce
Confidence            366779999999999999999999999999999999965

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.10  E-value=1.2e-11  Score=99.99  Aligned_cols=97  Identities=9%  Similarity=0.043  Sum_probs=76.7

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC--------hhHHHHHHHHhC
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK--------TTHFANLKKATG   78 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~--------~~~~~~~~~~~g   78 (280)
                      ....+.++||+.++|+.|+++|++++|+||++. ..++.. +.+++..+|+  .+...+.        ......+++++ 
T Consensus        74 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~l~~l-  148 (201)
T 4ap9_A           74 TREKVNVSPEARELVETLREKGFKVVLISGSFE-EVLEPF-KELGDEFMAN--RAIFEDGKFQGIRLRFRDKGEFLKRF-  148 (201)
T ss_dssp             GGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEET-TTSGGG-TTTSSEEEEE--EEEEETTEEEEEECCSSCHHHHHGGG-
T ss_pred             HHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcH-HHHHHH-HHcCchhhee--eEEeeCCceECCcCCccCHHHHHHhc-
Confidence            335568999999999999999999999999998 778888 9999988866  3332211        11245666666 


Q ss_pred             CCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                       +|++|++|||+.+|+++|+++|+. +.+.++
T Consensus       149 -~~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~  178 (201)
T 4ap9_A          149 -RDGFILAMGDGYADAKMFERADMG-IAVGRE  178 (201)
T ss_dssp             -TTSCEEEEECTTCCHHHHHHCSEE-EEESSC
T ss_pred             -CcCcEEEEeCCHHHHHHHHhCCce-EEECCC
Confidence             999999999999999999999997 555443

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.08  E-value=1.4e-10  Score=98.85  Aligned_cols=96  Identities=15%  Similarity=0.152  Sum_probs=74.4

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCch--HHHHHHHhhcCcc--ccccccceecCCC---hhHHHHHHHHhCCCCcc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEI--QGAQQLLDLFNWN--QYFDHKQIFPGQK---TTHFANLKKATGIEYKD   83 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--~~~~~~l~~~~l~--~~fd~~~i~~~~~---~~~~~~~~~~~g~~p~~   83 (280)
                      .+++||+.++|+.|+++|++++|+||++..  ......|+.+|+.  .+|+  .+++++.   ......+. ..+  ...
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~--vi~~~~~~~K~~~~~~~~-~~~--~~~  174 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEH--ILLQDPKEKGKEKRRELV-SQT--HDI  174 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTT--EEEECTTCCSSHHHHHHH-HHH--EEE
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCce--EEECCCCCCCcHHHHHHH-HhC--CCc
Confidence            689999999999999999999999999830  4566778888998  7788  6666542   23333333 333  344


Q ss_pred             EEEEeCCcccccccc-------c---------CCCeEEEEcCCC
Q psy8911          84 MVFFDDEERNSHDVS-------P---------LGVTCILVEDGM  111 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~-------~---------~G~~~i~v~~~~  111 (280)
                      |+||||+..|+.+|+       +         +|++++.++++.
T Consensus       175 ~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~  218 (258)
T 2i33_A          175 VLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM  218 (258)
T ss_dssp             EEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred             eEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence            999999999999994       3         899999998764

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.05  E-value=3.2e-10  Score=98.59  Aligned_cols=44  Identities=11%  Similarity=0.082  Sum_probs=38.4

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +|...+..+++++|++|+++++|||+.+|++.++.+|+. +.+.+
T Consensus       228 ~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~-vam~n  271 (304)
T 3l7y_A          228 HKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYS-YAMAN  271 (304)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEE-EECTT
T ss_pred             CHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCe-EEcCC
Confidence            566789999999999999999999999999999999965 44443

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.04  E-value=2.3e-10  Score=91.15  Aligned_cols=78  Identities=15%  Similarity=0.256  Sum_probs=66.3

Q ss_pred             HHHHHHHCCceEEEecCCCchHHHHHHHh--hcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccccc
Q psy8911          20 ILKYLKQNNCLVAAASRTSEIQGAQQLLD--LFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDV   97 (280)
Q Consensus        20 ~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~--~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa   97 (280)
                      .|+.|+++|++++|+||. .  .++.+++  .+++. +|.  .  +.++...++.+++++|++|++|+||||+.+|+.++
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~-~--~~~~~l~~l~lgi~-~~~--g--~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~  115 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER-A--CSKQTLSALKLDCK-TEV--S--VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECL  115 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS-C--CCHHHHHTTCCCCC-EEC--S--CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHH
T ss_pred             HHHHHHHCCCEEEEEeCc-H--HHHHHHHHhCCCcE-EEE--C--CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHH
Confidence            699999999999999999 5  4677888  66775 554  2  23455569999999999999999999999999999


Q ss_pred             ccCCCeEE
Q psy8911          98 SPLGVTCI  105 (280)
Q Consensus        98 ~~~G~~~i  105 (280)
                      +++|+.++
T Consensus       116 ~~ag~~~a  123 (168)
T 3ewi_A          116 KRVGLSAV  123 (168)
T ss_dssp             HHSSEEEE
T ss_pred             HHCCCEEE
Confidence            99998854

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.02  E-value=1.5e-11  Score=104.88  Aligned_cols=99  Identities=13%  Similarity=0.091  Sum_probs=76.5

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHH---HHhhcCccccccccceec--------CCChhHHHHHHHHhC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQ---LLDLFNWNQYFDHKQIFP--------GQKTTHFANLKKATG   78 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~---~l~~~~l~~~fd~~~i~~--------~~~~~~~~~~~~~~g   78 (280)
                      ...++|++.++++.| ++|+++ ++||.+. .....   .++..++..+|+  .+++        .++...|+.+++++|
T Consensus       135 ~~~~~~~~~~~l~~l-~~~~~~-i~tn~~~-~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~kpk~~~~~~~~~~lg  209 (271)
T 1vjr_A          135 KTLTYERLKKACILL-RKGKFY-IATHPDI-NCPSKEGPVPDAGSIMAAIE--ASTGRKPDLIAGKPNPLVVDVISEKFG  209 (271)
T ss_dssp             TTCCHHHHHHHHHHH-TTTCEE-EESCCCS-EECCTTSCEECHHHHHHHHH--HHHSCCCSEECSTTSTHHHHHHHHHHT
T ss_pred             CCcCHHHHHHHHHHH-HCCCeE-EEECCCc-cccCCCCccccccHHHHHHH--HHhCCCCcccCCCCCHHHHHHHHHHhC
Confidence            346789999999999 789998 9999876 32221   233445666776  3322        234455999999999


Q ss_pred             CCCccEEEEeCC-cccccccccCCCeEEEEcCCCch
Q psy8911          79 IEYKDMVFFDDE-ERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        79 ~~p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      ++|++|++|||+ .+|+++|+++|+.++++.++...
T Consensus       210 i~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~  245 (271)
T 1vjr_A          210 VPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETT  245 (271)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCC
T ss_pred             CCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCC
Confidence            999999999999 59999999999999999887543

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.00  E-value=6.1e-10  Score=95.87  Aligned_cols=44  Identities=20%  Similarity=0.260  Sum_probs=37.3

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +|...++.+++++|++++++++|||+.+|++.++.+|+. +.+.+
T Consensus       209 ~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~-vAm~N  252 (285)
T 3pgv_A          209 SKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKG-CIMAN  252 (285)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTT
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCE-EEccC
Confidence            355668999999999999999999999999999999954 44443

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=99.00  E-value=1.3e-10  Score=95.07  Aligned_cols=123  Identities=11%  Similarity=0.016  Sum_probs=92.7

Q ss_pred             cccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911         123 FIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       123 ~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      ...+.++++|+|+||+.+....              .++..+...||+.++|+.++ ++|.++|.|++ ...+++.+++.
T Consensus        31 ~~~~~tLVLDLDeTLvh~~~~~--------------~~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas-~~~ya~~vl~~   94 (204)
T 3qle_A           31 YQRPLTLVITLEDFLVHSEWSQ--------------KHGWRTAKRPGADYFLGYLS-QYYEIVLFSSN-YMMYSDKIAEK   94 (204)
T ss_dssp             -CCSEEEEEECBTTTEEEEEET--------------TTEEEEEECTTHHHHHHHHT-TTEEEEEECSS-CHHHHHHHHHH
T ss_pred             cCCCeEEEEeccccEEeeeccc--------------cCceeEEeCCCHHHHHHHHH-hCCEEEEEcCC-cHHHHHHHHHH
Confidence            3456799999999998643221              12234778899999999998 67999999999 99999999999


Q ss_pred             CCCc-cccccceEecC--CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         203 INLN-QYFSNKEIYPG--PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       203 ~gl~-~~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ++.. .+|+.......  .....|.+-++.+|.++++||+|+|++.........|+.+.-..
T Consensus        95 LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~~  156 (204)
T 3qle_A           95 LDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWN  156 (204)
T ss_dssp             TSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCCCC
T ss_pred             hCCCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeeeEC
Confidence            9987 48875322211  11233667778889999999999999998766666676665554

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.99  E-value=7.3e-10  Score=94.22  Aligned_cols=44  Identities=9%  Similarity=0.172  Sum_probs=38.2

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +|...+..+++++|++++++++|||+.+|++.++.+|+. +.+.+
T Consensus       194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~-vam~n  237 (268)
T 3r4c_A          194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIG-VAMGN  237 (268)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTT
T ss_pred             CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCe-EEeCC
Confidence            556778999999999999999999999999999999976 44443

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.96  E-value=1.7e-09  Score=93.09  Aligned_cols=45  Identities=16%  Similarity=0.188  Sum_probs=39.2

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +|...++.+++++|++++++++|||+.+|++.++.+|+. +.+.++
T Consensus       211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~-vam~na  255 (283)
T 3dao_A          211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGIS-YAVSNA  255 (283)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EEETTS
T ss_pred             cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCE-EEcCCC
Confidence            466789999999999999999999999999999999964 555554

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=98.96  E-value=9.3e-10  Score=88.12  Aligned_cols=84  Identities=15%  Similarity=0.199  Sum_probs=64.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCC---Cch-HHHHHHHhh-cCccccccccceecCCChhHHHHHHHHhCCCCcc
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRT---SEI-QGAQQLLDL-FNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKD   83 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~---~~~-~~~~~~l~~-~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~   83 (280)
                      ..++++||+.++|+.|+++ ++++|+||+   +.. ......+.. ++...+|+  .++++++.        .+    ++
T Consensus        66 ~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~--~i~~~~~~--------~l----~~  130 (180)
T 3bwv_A           66 RNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQH--FVFCGRKN--------II----LA  130 (180)
T ss_dssp             GSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGG--EEECSCGG--------GB----CC
T ss_pred             ccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCccc--EEEeCCcC--------ee----cc
Confidence            3578999999999999985 999999999   430 122344545 57778888  78777763        11    88


Q ss_pred             EEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          84 MVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        84 ~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      |+|||||+.|+.  .++| ++++++++
T Consensus       131 ~l~ieDs~~~i~--~aaG-~~i~~~~~  154 (180)
T 3bwv_A          131 DYLIDDNPKQLE--IFEG-KSIMFTAS  154 (180)
T ss_dssp             SEEEESCHHHHH--HCSS-EEEEECCG
T ss_pred             cEEecCCcchHH--HhCC-CeEEeCCC
Confidence            999999999985  4589 99999754

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.92  E-value=1.8e-09  Score=91.33  Aligned_cols=44  Identities=20%  Similarity=0.263  Sum_probs=38.2

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +|...+..+++++|++++++++|||+.+|+..++.+|+.++ +.+
T Consensus       183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~va-m~n  226 (258)
T 2pq0_A          183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVA-MGN  226 (258)
T ss_dssp             CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEE-ETT
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEE-eCC
Confidence            44566899999999999999999999999999999999655 544

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=98.88  E-value=1.1e-08  Score=86.73  Aligned_cols=42  Identities=10%  Similarity=-0.054  Sum_probs=37.9

Q ss_pred             CCCHHHHHHHHHHcCCCC--CcEEEEeCCcCCcccccccCceEE
Q psy8911         217 GPKTTHFESLKKATGIEY--KDMVFFDDEERNSHDVSPLGVTCI  258 (280)
Q Consensus       217 ~~k~~~~~~~~~~~~~~~--~~~l~igD~~~di~~a~~aG~~~i  258 (280)
                      .+|...+..+++++|+++  +++++|||+.+|+..++.+|+.++
T Consensus       175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va  218 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVY  218 (259)
T ss_dssp             CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEE
T ss_pred             CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEE
Confidence            356788999999999999  999999999999999999998744

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=98.85  E-value=5e-10  Score=94.62  Aligned_cols=97  Identities=13%  Similarity=0.196  Sum_probs=72.1

Q ss_pred             ecCCHHHHHHHHHHC-CceEEEecCCCchHHHHHHHhhcCcccccccc--------ceecCCChhHHHHHHHHhCCCCcc
Q psy8911          13 YYPDVPGILKYLKQN-NCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK--------QIFPGQKTTHFANLKKATGIEYKD   83 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~-g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~--------~i~~~~~~~~~~~~~~~~g~~p~~   83 (280)
                      .++++.++++.|+++ |+++ ++||... ......+...++..+|+..        .....++...|+.+++++|++|++
T Consensus       132 ~~~~~~~~l~~l~~~~~~~~-i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~  209 (271)
T 2x4d_A          132 SYQNMNNAFQVLMELEKPVL-ISLGKGR-YYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQ  209 (271)
T ss_dssp             CHHHHHHHHHHHHHCSSCCE-EEECCCS-EEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGG
T ss_pred             CHHHHHHHHHHHHhcCCCeE-EEEcCCc-ccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcce
Confidence            466788889999988 8988 7777665 3333333444544454410        111234556699999999999999


Q ss_pred             EEEEeCCc-ccccccccCCCeEEEEcCCC
Q psy8911          84 MVFFDDEE-RNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        84 ~l~v~D~~-~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|||+. +|+.+|+++|+.+++|.++.
T Consensus       210 ~i~iGD~~~nDi~~a~~aG~~~~~v~~g~  238 (271)
T 2x4d_A          210 AVMIGDDIVGDVGGAQRCGMRALQVRTGK  238 (271)
T ss_dssp             EEEEESCTTTTHHHHHHTTCEEEEESSTT
T ss_pred             EEEECCCcHHHHHHHHHCCCcEEEEcCCC
Confidence            99999998 99999999999999998763

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=98.78  E-value=3e-08  Score=85.32  Aligned_cols=45  Identities=13%  Similarity=0.186  Sum_probs=39.5

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +|...+..+++++|++++++++|||+.+|+..++.+|+ .+.+.++
T Consensus       216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~  260 (288)
T 1nrw_A          216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNA  260 (288)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTC
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCC
Confidence            34566899999999999999999999999999999999 6777654

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.77  E-value=1.6e-08  Score=93.22  Aligned_cols=97  Identities=18%  Similarity=0.298  Sum_probs=80.5

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc-C-------------ccccccccc-eecCCChhH------
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF-N-------------WNQYFDHKQ-IFPGQKTTH------   69 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~-~-------------l~~~fd~~~-i~~~~~~~~------   69 (280)
                      +..-|.+.++|+.||+.| ++.++||++. +.++.+++.+ |             |.+|||  . |+.+.|+..      
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~-~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD--~vI~~A~KP~FF~~~~p  320 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNSDY-KYTDKIMTYLFDFPHGPKPGSSHRPWQSYFD--LILVDARKPLFFGEGTV  320 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSSCH-HHHHHHHHHHTCSSSSSSTTSCCCCGGGGCS--EEEESCCTTGGGTTCCC
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCCCh-HHHHHHHHHhcCCCccccccccccchhhhCC--EEEEeCCCCCcccCCCc
Confidence            445678999999999999 9999999999 8888888876 5             778999  5 333333321      


Q ss_pred             ------------------------------HHHHHHHhCCCCccEEEEeCCc-ccccccc-cCCCeEEEEcCCC
Q psy8911          70 ------------------------------FANLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCILVEDGM  111 (280)
Q Consensus        70 ------------------------------~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~-~~G~~~i~v~~~~  111 (280)
                                                    +..+++.+|+.+++++||||.. .||-.++ .+||++++|.+..
T Consensus       321 fr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPEL  394 (555)
T 2jc9_A          321 LRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPEL  394 (555)
T ss_dssp             EEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTTH
T ss_pred             ceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEech
Confidence                                          5889999999999999999996 5899997 8999999997754

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=98.73  E-value=2.6e-08  Score=85.53  Aligned_cols=45  Identities=24%  Similarity=0.339  Sum_probs=39.1

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +|...+..+++++|++++++++|||+.+|+..++.+|+ .+.+.++
T Consensus       198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~  242 (282)
T 1rkq_A          198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNA  242 (282)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTS
T ss_pred             CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCC
Confidence            45677899999999999999999999999999999998 4666554

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=98.66  E-value=7.6e-08  Score=81.65  Aligned_cols=44  Identities=16%  Similarity=0.173  Sum_probs=41.0

Q ss_pred             HHHHHHHhCCCCccEEEEeCC-cccccccccCCCeEEEEcCCCch
Q psy8911          70 FANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      |+.+++++|++|++|++|||+ .+|+.+|+++|+.+++|.+|...
T Consensus       188 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~  232 (264)
T 3epr_A          188 MNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTT  232 (264)
T ss_dssp             HHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSC
T ss_pred             HHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCC
Confidence            999999999999999999999 69999999999999999887543

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.66  E-value=3.9e-08  Score=90.62  Aligned_cols=97  Identities=16%  Similarity=0.192  Sum_probs=80.1

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC-C-------------CccccccceEecCCCHH--------
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-N-------------LNQYFSNKEIYPGPKTT--------  221 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~-g-------------l~~~f~~~~~~~~~k~~--------  221 (280)
                      +..-|.+..+|+.|++.| ++.++||+ ...+++..++.+ |             +.+|||.+++. ..||.        
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS-~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~-A~KP~FF~~~~pf  321 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNS-DYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVD-ARKPLFFGEGTVL  321 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSS-CHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEES-CCTTGGGTTCCCE
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCC-ChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEe-CCCCCcccCCCcc
Confidence            455678999999999999 99999999 889999998887 6             45789975432 22221        


Q ss_pred             ----------------------------HHHHHHHHcCCCCCcEEEEeCCcC-Cccccc-ccCceEEEECCC
Q psy8911         222 ----------------------------HFESLKKATGIEYKDMVFFDDEER-NSHDVS-PLGVTCIHVKKG  263 (280)
Q Consensus       222 ----------------------------~~~~~~~~~~~~~~~~l~igD~~~-di~~a~-~aG~~~i~v~~g  263 (280)
                                                  .+..+++.+|+++++++||||... ||..++ .+|+.+++|..-
T Consensus       322 r~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          322 RQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             EEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             eEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence                                        158899999999999999999998 899997 799999999764

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.65  E-value=5.7e-08  Score=82.33  Aligned_cols=44  Identities=16%  Similarity=0.315  Sum_probs=39.5

Q ss_pred             HHHHHHHhCCCCccEEEEeCC-cccccccccCCCeEEEEcCCCch
Q psy8911          70 FANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      |+.+++.+|++|++|++|||+ .+|+++|+++|+.++++.++...
T Consensus       189 ~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~  233 (266)
T 3pdw_A          189 MEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTK  233 (266)
T ss_dssp             HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC---
T ss_pred             HHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCC
Confidence            889999999999999999999 79999999999999999877543

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=98.63  E-value=2.8e-08  Score=88.46  Aligned_cols=120  Identities=13%  Similarity=0.115  Sum_probs=83.6

Q ss_pred             cceeEEEecCCCCCCcccccc--------c-CcccccC---CeeE------ccCCceeccCCCHHHHHHHHhhCCcEEEE
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDL--------V-APFKKIG---QKVM------DAKGTLIKYYRGVPEILRYLKENKCLVAA  186 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~--------~-~~~~~~~---~~~~------~~~~~~~~~~~g~~~~L~~L~~~g~~~~i  186 (280)
                      ..+.++|||||||+++.....        . ++.....   ....      ..+...+.+.||+.++|+.++ ++|.++|
T Consensus        17 ~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~-~~yeivI   95 (372)
T 3ef0_A           17 KRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYELHI   95 (372)
T ss_dssp             TCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH-TTEEEEE
T ss_pred             CCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh-cCcEEEE
Confidence            346899999999998743211        1 1211110   0001      023346788999999999999 6799999


Q ss_pred             EcCCCcHHHHHHHHhhCCCcc-ccccceEecCCCHHHHHHHHHHc-CCCCCcEEEEeCCcCC
Q psy8911         187 ASRTSEILHAKQILNLINLNQ-YFSNKEIYPGPKTTHFESLKKAT-GIEYKDMVFFDDEERN  246 (280)
Q Consensus       187 ~T~~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~k~~~~~~~~~~~-~~~~~~~l~igD~~~d  246 (280)
                      .|++ .+.+++.+++.++... ||....+........|.+-++++ |.+++++|+|+|++.-
T Consensus        96 ~Tas-~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~~~~KdL~~L~~~dl~~viiiDd~~~~  156 (372)
T 3ef0_A           96 YTMG-TKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDTSMVVVIDDRGDV  156 (372)
T ss_dssp             ECSS-CHHHHHHHHHHHCTTSCSSSSCEECTTTSSCSSCCCGGGTCSSCCTTEEEEESCSGG
T ss_pred             EeCC-cHHHHHHHHHHhccCCceeeeEEEEecCCCCcceecHHHhcCCCCceEEEEeCCHHH
Confidence            9999 9999999999999987 88753332221122344556665 9999999999999964

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.62  E-value=2e-08  Score=86.40  Aligned_cols=92  Identities=12%  Similarity=0.172  Sum_probs=74.3

Q ss_pred             eecCCHHHHHHHHHHC-CceEEEecCC---------------------CchHHHHHHHhhcCcccccccc----------
Q psy8911          12 KYYPDVPGILKYLKQN-NCLVAAASRT---------------------SEIQGAQQLLDLFNWNQYFDHK----------   59 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~-g~~~~i~Sn~---------------------~~~~~~~~~l~~~~l~~~fd~~----------   59 (280)
                      .+++++.++++.|+++ |+++++.|+.                     .. ..++..++.+++..+|+..          
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~~~~~  200 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNL-LAIEKICEEYGVSVNINRCNPLAGDPEDS  200 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHH-HHHHHHHHHHTEEEEEEECCGGGTCCTTE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHH-HHHHHHHHHcCCCEEEEEccccccCCCCc
Confidence            4678999999999998 9999999987                     55 5677788888988777621          


Q ss_pred             ---ceecC--CChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeE
Q psy8911          60 ---QIFPG--QKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC  104 (280)
Q Consensus        60 ---~i~~~--~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~  104 (280)
                         .+...  ++...++.+++++|++|++|++|||+.+|+.+++++|+.+
T Consensus       201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~  250 (289)
T 3gyg_A          201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGY  250 (289)
T ss_dssp             EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEE
T ss_pred             eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEE
Confidence               11121  2334499999999999999999999999999999999553

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.61  E-value=1.4e-07  Score=79.95  Aligned_cols=43  Identities=21%  Similarity=0.377  Sum_probs=40.4

Q ss_pred             HHHHHHHhCCCCccEEEEeCC-cccccccccCCCeEEEEcCCCc
Q psy8911          70 FANLKKATGIEYKDMVFFDDE-ERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~-~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      |+.+++++|++|++|++|||+ .+|+.+|+++|+++++|.++..
T Consensus       193 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~  236 (268)
T 3qgm_A          193 MREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVT  236 (268)
T ss_dssp             HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSC
T ss_pred             HHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCC
Confidence            999999999999999999999 5999999999999999987654

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.48  E-value=5e-07  Score=76.37  Aligned_cols=86  Identities=14%  Similarity=0.227  Sum_probs=64.2

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCch---HHHHHHHhhcCccccccccceec---CCChhHHHHHHHHhCCCCc
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI---QGAQQLLDLFNWNQYFDHKQIFP---GQKTTHFANLKKATGIEYK   82 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~---~~~~~~l~~~~l~~~fd~~~i~~---~~~~~~~~~~~~~~g~~p~   82 (280)
                      ...+++||+.++|+.|+++|++++++||.+..   +.+...|+.+|+..+++...+..   +.+...+..+.+ .|.  .
T Consensus        98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~-~gy--~  174 (260)
T 3pct_A           98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVED-MGY--D  174 (260)
T ss_dssp             TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHT-TTC--E
T ss_pred             CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHh-cCC--C
Confidence            45789999999999999999999999998751   47888899999987774223333   223333555444 343  4


Q ss_pred             cEEEEeCCccccccc
Q psy8911          83 DMVFFDDEERNSHDV   97 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa   97 (280)
                      -+++|||+..|+.++
T Consensus       175 iv~~iGD~~~Dl~~~  189 (260)
T 3pct_A          175 IVLFVGDNLNDFGDA  189 (260)
T ss_dssp             EEEEEESSGGGGCGG
T ss_pred             EEEEECCChHHcCcc
Confidence            499999999999883

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.41  E-value=7.5e-07  Score=75.37  Aligned_cols=87  Identities=14%  Similarity=0.228  Sum_probs=65.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCch---HHHHHHHhhcCccccccccceec---CCChhHHHHHHHHhCCCCc
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI---QGAQQLLDLFNWNQYFDHKQIFP---GQKTTHFANLKKATGIEYK   82 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~---~~~~~~l~~~~l~~~fd~~~i~~---~~~~~~~~~~~~~~g~~p~   82 (280)
                      ...+++||+.++|+.|+++|++++|+||.+..   +.+...|+.+|+..+++...+..   +.+...+..+.+. |.  .
T Consensus        98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~-Gy--~  174 (262)
T 3ocu_A           98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQ-GY--E  174 (262)
T ss_dssp             TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHT-TE--E
T ss_pred             CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhc-CC--C
Confidence            35789999999999999999999999998651   47788899999987773213333   2344445555544 43  3


Q ss_pred             cEEEEeCCcccccccc
Q psy8911          83 DMVFFDDEERNSHDVS   98 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~   98 (280)
                      -+++|||...|+.++.
T Consensus       175 iv~~vGD~~~Dl~~~~  190 (262)
T 3ocu_A          175 IVLYVGDNLDDFGNTV  190 (262)
T ss_dssp             EEEEEESSGGGGCSTT
T ss_pred             EEEEECCChHHhcccc
Confidence            4999999999999844

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=98.31  E-value=1.6e-07  Score=76.68  Aligned_cols=94  Identities=7%  Similarity=0.001  Sum_probs=75.9

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc-ccccccceecCC----ChhHHHHHHHHhCCCCccE
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN-QYFDHKQIFPGQ----KTTHFANLKKATGIEYKDM   84 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~-~~fd~~~i~~~~----~~~~~~~~~~~~g~~p~~~   84 (280)
                      .+...||+.++|+.|. ++|.++|.|++.. ..++.+++.++.. .+|+  ..+..+    ..+.|.+.++.+|.++++|
T Consensus        57 ~v~~RPgl~eFL~~l~-~~yeivI~Tas~~-~ya~~vl~~LDp~~~~f~--~rl~R~~c~~~~g~y~KdL~~Lgrdl~~v  132 (204)
T 3qle_A           57 RTAKRPGADYFLGYLS-QYYEIVLFSSNYM-MYSDKIAEKLDPIHAFVS--YNLFKEHCVYKDGVHIKDLSKLNRDLSKV  132 (204)
T ss_dssp             EEEECTTHHHHHHHHT-TTEEEEEECSSCH-HHHHHHHHHTSTTCSSEE--EEECGGGSEEETTEEECCGGGSCSCGGGE
T ss_pred             eEEeCCCHHHHHHHHH-hCCEEEEEcCCcH-HHHHHHHHHhCCCCCeEE--EEEEecceeEECCeeeecHHHhCCChHHE
Confidence            4788999999999999 6799999999999 9999999999987 4888  333221    1233777788899999999


Q ss_pred             EEEeCCcccccccccCCCeEEEE
Q psy8911          85 VFFDDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        85 l~v~D~~~~i~aa~~~G~~~i~v  107 (280)
                      |+|||++..+......|+...-+
T Consensus       133 IiIDDsp~~~~~~p~N~I~I~~~  155 (204)
T 3qle_A          133 IIIDTDPNSYKLQPENAIPMEPW  155 (204)
T ss_dssp             EEEESCTTTTTTCGGGEEECCCC
T ss_pred             EEEECCHHHHhhCccCceEeeeE
Confidence            99999999887666666555444

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.26  E-value=1.2e-06  Score=83.81  Aligned_cols=85  Identities=14%  Similarity=0.171  Sum_probs=70.3

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      ++.|++.+.|+.|+++|+++.++|+. ....++.+.+++|++.+|...  .+..|....+.+.+    . ++++||||+.
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd-~~~~a~~ia~~lgi~~~~~~~--~P~~K~~~v~~l~~----~-~~v~~vGDg~  528 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGD-NWRSAEAISRELNLDLVIAEV--LPHQKSEEVKKLQA----K-EVVAFVGDGI  528 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHTCSEEECSC--CTTCHHHHHHHHTT----T-CCEEEEECSS
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHcCCCEEEEeC--CHHhHHHHHHHHhh----C-CeEEEEeCCH
Confidence            57899999999999999999999999 899999999999999887642  23445444444433    3 8999999999


Q ss_pred             CCcccccccCceE
Q psy8911         245 RNSHDVSPLGVTC  257 (280)
Q Consensus       245 ~di~~a~~aG~~~  257 (280)
                      +|+.+.++||+-.
T Consensus       529 ND~~al~~A~vgi  541 (645)
T 3j08_A          529 NDAPALAQADLGI  541 (645)
T ss_dssp             SCHHHHHHSSEEE
T ss_pred             hHHHHHHhCCEEE
Confidence            9999999998653

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=98.24  E-value=5.9e-07  Score=78.40  Aligned_cols=117  Identities=15%  Similarity=0.059  Sum_probs=84.4

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      +++++|+|+||+.+...               .....+...||+.++|+.+.+. |.++|.|++ ...+++.+++.++..
T Consensus       141 ~tLVLDLDeTLvh~~~~---------------~~~~~~~~RP~l~eFL~~l~~~-yeivIfTas-~~~ya~~vld~Ld~~  203 (320)
T 3shq_A          141 KLLVLDIDYTLFDHRSP---------------AETGTELMRPYLHEFLTSAYED-YDIVIWSAT-SMRWIEEKMRLLGVA  203 (320)
T ss_dssp             EEEEECCBTTTBCSSSC---------------CSSHHHHBCTTHHHHHHHHHHH-EEEEEECSS-CHHHHHHHHHHTTCT
T ss_pred             cEEEEeccccEEccccc---------------CCCcceEeCCCHHHHHHHHHhC-CEEEEEcCC-cHHHHHHHHHHhCCC
Confidence            68999999999874321               1223456789999999999955 999999999 999999999999877


Q ss_pred             ccccc--ceEec---------CCCHHHHHHHHHHc-----CCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911         207 QYFSN--KEIYP---------GPKTTHFESLKKAT-----GIEYKDMVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       207 ~~f~~--~~~~~---------~~k~~~~~~~~~~~-----~~~~~~~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      ..++.  ..+..         ......|.+-++.+     |.+++++|+|+|++.........|+...-+
T Consensus       204 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~I~~~  273 (320)
T 3shq_A          204 SNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPF  273 (320)
T ss_dssp             TCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEECCCC
T ss_pred             CCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEEeCeE
Confidence            55321  11111         11122344555565     899999999999999877666666665544

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.22  E-value=3.3e-06  Score=64.82  Aligned_cols=96  Identities=17%  Similarity=0.087  Sum_probs=61.5

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc---HHHHHHHHhh
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE---ILHAKQILNL  202 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~---~~~~~~~l~~  202 (280)
                      .+++.||+||||++..                  +..-..+.|++.+.|+.|+++|++++|+|+. .   ...+...++.
T Consensus         3 ~k~i~~DlDGTL~~~~------------------~~~i~~~~~~~~~al~~l~~~G~~iii~TgR-~~~~~~~~~~~l~~   63 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHR------------------YPRIGEEIPFAVETLKLLQQEKHRLILWSVR-EGELLDEAIEWCRA   63 (142)
T ss_dssp             CCEEEECCBTTTBCSC------------------TTSCCCBCTTHHHHHHHHHHTTCEEEECCSC-CHHHHHHHHHHHHT
T ss_pred             CeEEEEECcCCCCCCC------------------CccccccCHHHHHHHHHHHHCCCEEEEEeCC-CcccHHHHHHHHHH
Confidence            3688999999998621                  1111235689999999999999999999998 5   3445566777


Q ss_pred             CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCC
Q psy8911         203 INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERN  246 (280)
Q Consensus       203 ~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~d  246 (280)
                      +|+..++-   ....|....   ......=++..-+||+|...+
T Consensus        64 ~gi~~~~I---~~n~P~~~~---~~~~~~rK~~~~~fIDDR~~~  101 (142)
T 2obb_A           64 RGLEFYAA---NKDYPEEER---DHQGFSRKLKADLFIDDRNVG  101 (142)
T ss_dssp             TTCCCSEE---SSSSTTC------CCSCCSSCCCSEEECTTSTT
T ss_pred             cCCCeEEE---EcCCchhhh---cchhhcCCcCCCEEeeccccC
Confidence            78753322   112233211   111112236677889998765

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.22  E-value=4.3e-06  Score=76.10  Aligned_cols=99  Identities=13%  Similarity=0.175  Sum_probs=78.6

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc---------CccccccccceecC-CChhH-----------
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF---------NWNQYFDHKQIFPG-QKTTH-----------   69 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~---------~l~~~fd~~~i~~~-~~~~~-----------   69 (280)
                      +..-|.+..+|+.||++|.++.++||++. ..+...++.+         .|.+|||  .|+.+ .|++.           
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~-~y~~~~M~y~~~~~~~~g~dWrdlFD--vVIv~A~KP~FF~~~~~~~~v~  261 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNSEY-SYSKLLLDYALSPFLDKGEHWQGLFE--FVITLANKPRFFYDNLRFLSVN  261 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCH-HHHHHHHHHHTGGGSCTTCCGGGGCS--EEEESCCTTHHHHSCCCEEEEC
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCCCc-hHHHHHHHhhcccCCCCCCChhhhcC--EEEECCCCCCcccCCCcceEEE
Confidence            34457899999999999999999999999 8887776653         5899999  55543 23221           


Q ss_pred             ----------------------HHHHHHHhCCCCccEEEEeCCc-ccccccc-cCCCeEEEEcCCCc
Q psy8911          70 ----------------------FANLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCILVEDGMT  112 (280)
Q Consensus        70 ----------------------~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~-~~G~~~i~v~~~~~  112 (280)
                                            ...+.+.+|..-.+++||||+. .||-.++ ..||+|++|-....
T Consensus       262 ~~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL~  328 (470)
T 4g63_A          262 PENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELG  328 (470)
T ss_dssp             TTTCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTHH
T ss_pred             CCCCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHHH
Confidence                                  7788888999999999999996 5766655 58999999977654

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=98.15  E-value=8.8e-07  Score=75.39  Aligned_cols=83  Identities=8%  Similarity=0.089  Sum_probs=59.4

Q ss_pred             HhhCCcEEEEEcCCCcHHHHHHHHhhCC--Cccccccc-------eEec--CCCHHHHHHHHHHcCCCCCcEEEEeCCcC
Q psy8911         177 LKENKCLVAAASRTSEILHAKQILNLIN--LNQYFSNK-------EIYP--GPKTTHFESLKKATGIEYKDMVFFDDEER  245 (280)
Q Consensus       177 L~~~g~~~~i~T~~~~~~~~~~~l~~~g--l~~~f~~~-------~~~~--~~k~~~~~~~~~~~~~~~~~~l~igD~~~  245 (280)
                      +++.+++++++|+. ..  ....+++++  +.++|+.+       .+.+  .+|+..++.+++++|++++++++|||+.+
T Consensus       142 ~~~~~~ki~i~~~~-~~--~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~n  218 (271)
T 1rlm_A          142 IDDVLFKFSLNLPD-EQ--IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN  218 (271)
T ss_dssp             CCSCEEEEEEECCG-GG--HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             CCCceEEEEEEcCH-HH--HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHH
Confidence            45567899999887 33  333344333  33444321       2222  37778899999999999999999999999


Q ss_pred             CcccccccCceEEEECCC
Q psy8911         246 NSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       246 di~~a~~aG~~~i~v~~g  263 (280)
                      |+..++.+|+. +.+.++
T Consensus       219 D~~m~~~ag~~-va~~na  235 (271)
T 1rlm_A          219 DAEMLKMARYS-FAMGNA  235 (271)
T ss_dssp             GHHHHHHCSEE-EECTTC
T ss_pred             HHHHHHHcCCe-EEeCCc
Confidence            99999999995 446544

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=98.15  E-value=5.5e-06  Score=68.71  Aligned_cols=96  Identities=14%  Similarity=0.086  Sum_probs=73.6

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc---------c--cccce-e-----------------
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY---------F--DHKQI-F-----------------   62 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~---------f--d~~~i-~-----------------   62 (280)
                      .+-|.+.+.|++|+++|++++++|+.+. ..++.+++.+++..+         +  +...+ .                 
T Consensus        22 ~i~~~~~~~l~~l~~~g~~~~i~TGr~~-~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~  100 (227)
T 1l6r_A           22 LISTKAIESIRSAEKKGLTVSLLSGNVI-PVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT  100 (227)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEECCCCc-HHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHh
Confidence            3556799999999999999999999999 788888888887541         1  11111 0                 


Q ss_pred             ------------------------------------------------c--CCChhHHHHHHHHhCCCCccEEEEeCCcc
Q psy8911          63 ------------------------------------------------P--GQKTTHFANLKKATGIEYKDMVFFDDEER   92 (280)
Q Consensus        63 ------------------------------------------------~--~~~~~~~~~~~~~~g~~p~~~l~v~D~~~   92 (280)
                                                                      .  .+|....+.+++.+|++|+++++|||+.+
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~n  180 (227)
T 1l6r_A          101 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN  180 (227)
T ss_dssp             SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred             cCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHH
Confidence                                                            0  01122388889999999999999999999


Q ss_pred             cccccccCCCeEEEEcC
Q psy8911          93 NSHDVSPLGVTCILVED  109 (280)
Q Consensus        93 ~i~aa~~~G~~~i~v~~  109 (280)
                      |+.+++.+|+. +.+.+
T Consensus       181 D~~m~~~ag~~-va~~n  196 (227)
T 1l6r_A          181 DMPMFQLPVRK-ACPAN  196 (227)
T ss_dssp             GHHHHTSSSEE-EECTT
T ss_pred             hHHHHHHcCce-EEecC
Confidence            99999999985 44533

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.07  E-value=2.3e-06  Score=72.24  Aligned_cols=44  Identities=11%  Similarity=0.236  Sum_probs=39.2

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +|+..+..+++++|++|+++++|||+.+|+.+++.+|+.+ .+.+
T Consensus       187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v-~~~n  230 (261)
T 2rbk_A          187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGV-AMGQ  230 (261)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTT
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceE-EecC
Confidence            7778899999999999999999999999999999999954 4443

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.06  E-value=7.5e-06  Score=78.30  Aligned_cols=84  Identities=13%  Similarity=0.150  Sum_probs=69.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      +++|++.+.|+.|+++|++++++|+.+. ..++.+.+.+|+..+|.  .+...+|..    +.+.++-. ++++||||+.
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~-~~a~~ia~~lgi~~~~~--~~~P~~K~~----~v~~l~~~-~~v~~vGDg~  528 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNLDLVIA--EVLPHQKSE----EVKKLQAK-EVVAFVGDGI  528 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEEC--SCCTTCHHH----HHHHHTTT-CCEEEEECSS
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHcCCCEEEE--eCCHHhHHH----HHHHHhhC-CeEEEEeCCH
Confidence            5789999999999999999999999999 89999999999988877  454443332    33334334 8999999999


Q ss_pred             ccccccccCCCe
Q psy8911          92 RNSHDVSPLGVT  103 (280)
Q Consensus        92 ~~i~aa~~~G~~  103 (280)
                      +|+.+.+.+|+-
T Consensus       529 ND~~al~~A~vg  540 (645)
T 3j08_A          529 NDAPALAQADLG  540 (645)
T ss_dssp             SCHHHHHHSSEE
T ss_pred             hHHHHHHhCCEE
Confidence            999999999943

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.05  E-value=8.1e-06  Score=67.68  Aligned_cols=92  Identities=11%  Similarity=0.142  Sum_probs=67.8

Q ss_pred             CCHHHHHHHHH-HC-CceE-----------EEec-CCCchHHHHHHHhhcCcccccccc------ceecC--CChhHHHH
Q psy8911          15 PDVPGILKYLK-QN-NCLV-----------AAAS-RTSEIQGAQQLLDLFNWNQYFDHK------QIFPG--QKTTHFAN   72 (280)
Q Consensus        15 ~g~~~~l~~L~-~~-g~~~-----------~i~S-n~~~~~~~~~~l~~~~l~~~fd~~------~i~~~--~~~~~~~~   72 (280)
                      +.+.++++.++ +. |+.+           ++++ +.+. +..+.+++.++  ++|+..      .+...  ++...++.
T Consensus        84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~ei~~~~~~K~~~~~~  160 (231)
T 1wr8_A           84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINV-ETVREIINELN--LNLVAVDSGFAIHVKKPWINKGSGIEK  160 (231)
T ss_dssp             SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCH-HHHHHHHHHTT--CSCEEEECSSCEEEECTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCH-HHHHHHHHhcC--CcEEEEecCcEEEEecCCCChHHHHHH
Confidence            77889999998 65 7654           6777 5566 67788888765  455511      11211  23334999


Q ss_pred             HHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          73 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        73 ~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      +++++|++|++|++|||+.+|+.+++.+|+. +.+.++
T Consensus       161 ~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~  197 (231)
T 1wr8_A          161 ASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQA  197 (231)
T ss_dssp             HHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred             HHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecCC
Confidence            9999999999999999999999999999997 555443

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=98.04  E-value=1.9e-06  Score=74.41  Aligned_cols=91  Identities=8%  Similarity=-0.002  Sum_probs=64.9

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc----eE---------ecC------CCHHHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK----EI---------YPG------PKTTHF  223 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~----~~---------~~~------~k~~~~  223 (280)
                      .+++.||+.++++.|+++|+++.++|++ ....++.+++++|+......+    ..         ...      .+....
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg-~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~  217 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAG-IGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA  217 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEE-EHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCC-cHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence            4688999999999999999999999999 899999999999986432110    00         111      112222


Q ss_pred             HHHH--HHcCCCCCcEEEEeCCcCCcccccccC
Q psy8911         224 ESLK--KATGIEYKDMVFFDDEERNSHDVSPLG  254 (280)
Q Consensus       224 ~~~~--~~~~~~~~~~l~igD~~~di~~a~~aG  254 (280)
                      .+..  ..+.-..++++|+||+.+|+.+++.+.
T Consensus       218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~  250 (297)
T 4fe3_A          218 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA  250 (297)
T ss_dssp             HTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCS
T ss_pred             HHHHHHHHhhccCCEEEEEeCcHHHHHHHhCcc
Confidence            2222  233446678999999999999877543

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.03  E-value=1.3e-05  Score=72.93  Aligned_cols=99  Identities=11%  Similarity=0.094  Sum_probs=78.6

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---------CCccccccceEecCCCH--------------
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---------NLNQYFSNKEIYPGPKT--------------  220 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---------gl~~~f~~~~~~~~~k~--------------  220 (280)
                      +..-|....+|+.|+++|.++.++||+ .-.+++..+..+         .+.+|||.+++.. .||              
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS-~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A-~KP~FF~~~~~~~~v~~  262 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNS-EYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLA-NKPRFFYDNLRFLSVNP  262 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSS-CHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESC-CTTHHHHSCCCEEEECT
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCC-CchHHHHHHHhhcccCCCCCCChhhhcCEEEECC-CCCCcccCCCcceEEEC
Confidence            334578899999999999999999999 889988877763         4678999764432 111              


Q ss_pred             -------------------HHHHHHHHHcCCCCCcEEEEeCCcC-Ccccccc-cCceEEEECCCC
Q psy8911         221 -------------------THFESLKKATGIEYKDMVFFDDEER-NSHDVSP-LGVTCIHVKKGM  264 (280)
Q Consensus       221 -------------------~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~~-aG~~~i~v~~g~  264 (280)
                                         .....+.+.+|..-.+++||||... ||..+++ .|++|++|-...
T Consensus       263 ~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL  327 (470)
T 4g63_A          263 ENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL  327 (470)
T ss_dssp             TTCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTH
T ss_pred             CCCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHH
Confidence                               2267777888999999999999999 7777776 799999997654

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.02  E-value=6.4e-06  Score=79.77  Aligned_cols=84  Identities=14%  Similarity=0.177  Sum_probs=69.1

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      ++.|++.+.++.|+++|+++.++|+. ....++.+.+.+|++.+|...  .+..|....+.+.+    . ++++||||+.
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd-~~~~a~~ia~~lgi~~~~~~~--~P~~K~~~v~~l~~----~-~~v~~vGDg~  606 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGD-NWRSAEAISRELNLDLVIAEV--LPHQKSEEVKKLQA----K-EVVAFVGDGI  606 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHTCSEEECSC--CTTCHHHHHHHHTT----T-CCEEEEECSS
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHcCCcEEEccC--CHHHHHHHHHHHhc----C-CeEEEEECCh
Confidence            57799999999999999999999999 899999999999999777642  23444444444433    3 8999999999


Q ss_pred             CCcccccccCce
Q psy8911         245 RNSHDVSPLGVT  256 (280)
Q Consensus       245 ~di~~a~~aG~~  256 (280)
                      +|+.+.+.||+-
T Consensus       607 ND~~al~~A~vg  618 (723)
T 3j09_A          607 NDAPALAQADLG  618 (723)
T ss_dssp             TTHHHHHHSSEE
T ss_pred             hhHHHHhhCCEE
Confidence            999999998854

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.99  E-value=5e-06  Score=73.62  Aligned_cols=105  Identities=11%  Similarity=0.051  Sum_probs=67.9

Q ss_pred             ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc---HHHHHHHH
Q psy8911         124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE---ILHAKQIL  200 (280)
Q Consensus       124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~---~~~~~~~l  200 (280)
                      .+.+.+.||+|||||+.                       -.++||+.+.|+.|+++|+++.++||+..   .+.++.+.
T Consensus        11 ~~~~~~l~D~DGvl~~g-----------------------~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~   67 (352)
T 3kc2_A           11 SKKIAFAFDIDGVLFRG-----------------------KKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFIS   67 (352)
T ss_dssp             -CCEEEEECCBTTTEET-----------------------TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHH
T ss_pred             ccCCEEEEECCCeeEcC-----------------------CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHH
Confidence            35688999999999851                       24779999999999999999999999721   33444444


Q ss_pred             hhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEE
Q psy8911         201 NLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHV  260 (280)
Q Consensus       201 ~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v  260 (280)
                      +.+|+.--.+.+..+..+-.. +.   +    ....+++||-. .-.+.++++|++.+..
T Consensus        68 ~~lgi~~~~~~i~ts~~~~~~-~~---~----~~~~v~viG~~-~l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A           68 SKLDVDVSPLQIIQSHTPYKS-LV---N----KYSRILAVGTP-SVRGVAEGYGFQDVVH  118 (352)
T ss_dssp             HHHTSCCCGGGEECTTGGGGG-GT---T----TCSEEEEESST-THHHHHHHHTCSEEEE
T ss_pred             HhcCCCCChhhEeehHHHHHH-HH---h----cCCEEEEECCH-HHHHHHHhCCCeEecc
Confidence            468986444433221111111 21   1    23566777754 3345667789888753

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=97.94  E-value=1.6e-05  Score=67.43  Aligned_cols=36  Identities=11%  Similarity=0.202  Sum_probs=33.3

Q ss_pred             hhHHHHHHHHhCCCCccEEEEeCCcccccccccCCC
Q psy8911          67 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGV  102 (280)
Q Consensus        67 ~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~  102 (280)
                      ...++.+++++|++|++|++|||+.+|+++++.+|+
T Consensus       199 ~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~  234 (279)
T 4dw8_A          199 ALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGM  234 (279)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred             HHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCc
Confidence            334999999999999999999999999999999995

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.92  E-value=1.9e-05  Score=67.29  Aligned_cols=58  Identities=17%  Similarity=0.094  Sum_probs=47.4

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      ++++.+|+||||++.                    ..  ...+...+.|++|+++|++++++|++ ....+...++.+++
T Consensus         9 ~~li~~DlDGTLl~~--------------------~~--~~~~~~~~~l~~l~~~G~~~~iaTGR-~~~~~~~~~~~l~~   65 (275)
T 1xvi_A            9 PLLVFSDLDGTLLDS--------------------HS--YDWQPAAPWLTRLREANVPVILCSSK-TSAEMLYLQKTLGL   65 (275)
T ss_dssp             CEEEEEECTTTTSCS--------------------SC--CSCCTTHHHHHHHHHTTCCEEEECSS-CHHHHHHHHHHTTC
T ss_pred             ceEEEEeCCCCCCCC--------------------CC--cCCHHHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcCC
Confidence            578999999999862                    11  13367899999999999999999999 78888888888776


Q ss_pred             c
Q psy8911         206 N  206 (280)
Q Consensus       206 ~  206 (280)
                      .
T Consensus        66 ~   66 (275)
T 1xvi_A           66 Q   66 (275)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=97.87  E-value=1e-05  Score=72.02  Aligned_cols=94  Identities=12%  Similarity=0.100  Sum_probs=73.2

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc-cccccceecCCChhH-HHHHHHHh-CCCCccEE
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ-YFDHKQIFPGQKTTH-FANLKKAT-GIEYKDMV   85 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~-~fd~~~i~~~~~~~~-~~~~~~~~-g~~p~~~l   85 (280)
                      ..+.+.||+.++|+.+. ++|.++|.|++.. ..++.+++.++..+ ||++ .+++.++.+. |.+-++++ |.++++||
T Consensus        72 ~~v~~RPg~~eFL~~l~-~~yeivI~Tas~~-~yA~~vl~~LDp~~~~f~~-ri~sr~~~g~~~~KdL~~L~~~dl~~vi  148 (372)
T 3ef0_A           72 YYIKFRPGLAQFLQKIS-ELYELHIYTMGTK-AYAKEVAKIIDPTGKLFQD-RVLSRDDSGSLAQKSLRRLFPCDTSMVV  148 (372)
T ss_dssp             EEEEECTTHHHHHHHHH-TTEEEEEECSSCH-HHHHHHHHHHCTTSCSSSS-CEECTTTSSCSSCCCGGGTCSSCCTTEE
T ss_pred             EEEEECcCHHHHHHHHh-cCcEEEEEeCCcH-HHHHHHHHHhccCCceeee-EEEEecCCCCcceecHHHhcCCCCceEE
Confidence            35788999999999999 7899999999999 99999999999887 8874 3554433333 55566666 99999999


Q ss_pred             EEeCCcccccccccCCCeEEEEcC
Q psy8911          86 FFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        86 ~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      +|||++.....-   . ++|.+.+
T Consensus       149 iiDd~~~~~~~~---p-N~I~i~~  168 (372)
T 3ef0_A          149 VIDDRGDVWDWN---P-NLIKVVP  168 (372)
T ss_dssp             EEESCSGGGTTC---T-TEEECCC
T ss_pred             EEeCCHHHcCCC---C-cEeeeCC
Confidence            999998654322   2 6666643

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=97.79  E-value=3.2e-05  Score=74.83  Aligned_cols=92  Identities=12%  Similarity=0.144  Sum_probs=70.8

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEE  244 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~  244 (280)
                      ++.|++++.|+.|+++|+++.++|+. ....++.+.+.+|++++|..+  .+..|.+..+.+.    -..+.++||||+.
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd-~~~~a~~ia~~lgi~~v~a~~--~P~~K~~~v~~l~----~~g~~V~~vGDG~  626 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGD-SKRTAEAVAGTLGIKKVVAEI--MPEDKSRIVSELK----DKGLIVAMAGDGV  626 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSS-CHHHHHHHHHHHTCCCEECSC--CHHHHHHHHHHHH----HHSCCEEEEECSS
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCCEEEEec--CHHHHHHHHHHHH----hcCCEEEEEECCh
Confidence            46699999999999999999999999 899999999999999876532  1223333333333    3467899999999


Q ss_pred             CCcccccccCceEEEECCCC
Q psy8911         245 RNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       245 ~di~~a~~aG~~~i~v~~g~  264 (280)
                      +|+.+.+.|++- |.+.+|.
T Consensus       627 ND~paL~~AdvG-IAmg~g~  645 (736)
T 3rfu_A          627 NDAPALAKADIG-IAMGTGT  645 (736)
T ss_dssp             TTHHHHHHSSEE-EEESSSC
T ss_pred             HhHHHHHhCCEE-EEeCCcc
Confidence            999999998865 3444443

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=97.79  E-value=2.5e-05  Score=66.66  Aligned_cols=92  Identities=11%  Similarity=0.147  Sum_probs=63.7

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc-Cccccccc-------cceecC--CChhHHHHHHHHhCCC
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF-NWNQYFDH-------KQIFPG--QKTTHFANLKKATGIE   80 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~-~l~~~fd~-------~~i~~~--~~~~~~~~~~~~~g~~   80 (280)
                      ..+++++.+++..+....+++.+. ..+.  ..+.+++.+ ...+.|..       ..+...  +|....+.+++.+|++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~ki~~~-~~~~--~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~  217 (290)
T 3dnp_A          141 VQFVESLSDLLMDEPVSAPVIEVY-TEHD--IQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLS  217 (290)
T ss_dssp             EEECSCHHHHHHHSCCCCSEEEEE-CCGG--GHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCC
T ss_pred             ccccCCHHHHHhcCCCCceEEEEe-CCHH--HHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCC
Confidence            567889999999998889999654 3333  345555543 11122220       011111  2333499999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEE
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      |++|++|||+.+|+++++.+|+.++
T Consensus       218 ~~~~i~~GD~~NDi~m~~~ag~~va  242 (290)
T 3dnp_A          218 MDDVVAIGHQYDDLPMIELAGLGVA  242 (290)
T ss_dssp             GGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             HHHEEEECCchhhHHHHHhcCCEEE
Confidence            9999999999999999999997433

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=97.78  E-value=9.7e-06  Score=68.84  Aligned_cols=81  Identities=9%  Similarity=0.126  Sum_probs=56.7

Q ss_pred             HHHHCCceEEEecCCCchHHHHHHHhhcC--ccccccccceecC-----------CChhHHHHHHHHhCCCCccEEEEeC
Q psy8911          23 YLKQNNCLVAAASRTSEIQGAQQLLDLFN--WNQYFDHKQIFPG-----------QKTTHFANLKKATGIEYKDMVFFDD   89 (280)
Q Consensus        23 ~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~--l~~~fd~~~i~~~-----------~~~~~~~~~~~~~g~~p~~~l~v~D   89 (280)
                      .+++.+++++++|+...   .+.+++.++  +.++|+  .+.++           ++...++.+++.+|++|++|++|||
T Consensus       141 ~~~~~~~ki~i~~~~~~---~~~~~~~l~~~~~~~~~--~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD  215 (271)
T 1rlm_A          141 EIDDVLFKFSLNLPDEQ---IPLVIDKLHVALDGIMK--PVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGD  215 (271)
T ss_dssp             GCCSCEEEEEEECCGGG---HHHHHHHHHHHTTTSSE--EEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred             hCCCceEEEEEEcCHHH---HHHHHHHHHHHcCCcEE--EEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECC
Confidence            34567889999887643   444444443  334455  22222           2233499999999999999999999


Q ss_pred             CcccccccccCCCeEEEEcC
Q psy8911          90 EERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        90 ~~~~i~aa~~~G~~~i~v~~  109 (280)
                      +.+|+.+++.+|+. +.+.+
T Consensus       216 ~~nD~~m~~~ag~~-va~~n  234 (271)
T 1rlm_A          216 SGNDAEMLKMARYS-FAMGN  234 (271)
T ss_dssp             SGGGHHHHHHCSEE-EECTT
T ss_pred             cHHHHHHHHHcCCe-EEeCC
Confidence            99999999999985 44533

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.77  E-value=2.6e-05  Score=75.58  Aligned_cols=83  Identities=13%  Similarity=0.160  Sum_probs=68.2

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      ++.|++.+.|+.|+++|++++++|+.+. ..++.+.+.+|+..+|.  .+...+|.    .+.+.++-. ++++||||+.
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~-~~a~~ia~~lgi~~~~~--~~~P~~K~----~~v~~l~~~-~~v~~vGDg~  606 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNLDLVIA--EVLPHQKS----EEVKKLQAK-EVVAFVGDGI  606 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEEC--SCCTTCHH----HHHHHHTTT-CCEEEEECSS
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHcCCcEEEc--cCCHHHHH----HHHHHHhcC-CeEEEEECCh
Confidence            5789999999999999999999999999 89999999999987776  45443333    223333333 8999999999


Q ss_pred             ccccccccCCC
Q psy8911          92 RNSHDVSPLGV  102 (280)
Q Consensus        92 ~~i~aa~~~G~  102 (280)
                      +|+.+.+.+|+
T Consensus       607 ND~~al~~A~v  617 (723)
T 3j09_A          607 NDAPALAQADL  617 (723)
T ss_dssp             TTHHHHHHSSE
T ss_pred             hhHHHHhhCCE
Confidence            99999999994

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=97.75  E-value=8.2e-06  Score=73.15  Aligned_cols=93  Identities=16%  Similarity=0.045  Sum_probs=66.7

Q ss_pred             ccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccc------c--------ccceEe--cC----
Q psy8911         158 DAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY------F--------SNKEIY--PG----  217 (280)
Q Consensus       158 ~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~------f--------~~~~~~--~~----  217 (280)
                      ..+...+++|||++++++.|+++|++++|+|++ ....++.+.+.+|+..-      +        +....+  ..    
T Consensus       214 ~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg-~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~  292 (385)
T 4gxt_A          214 IKYFVGIRTLDEMVDLYRSLEENGIDCYIVSAS-FIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPI  292 (385)
T ss_dssp             EEEEECCEECHHHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCC
T ss_pred             EeeccCceeCHHHHHHHHHHHHCCCeEEEEcCC-cHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccce
Confidence            344556789999999999999999999999999 99999999999886421      1        111111  01    


Q ss_pred             ----CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccc
Q psy8911         218 ----PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSP  252 (280)
Q Consensus       218 ----~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~  252 (280)
                          .|+..++.+++. ......++++|||..|+...++
T Consensus       293 ~~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~  330 (385)
T 4gxt_A          293 SIREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLKE  330 (385)
T ss_dssp             CSTHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHHHH
T ss_pred             eCCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHhc
Confidence                133444444332 3455679999999999888876

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.74  E-value=3.6e-05  Score=64.57  Aligned_cols=57  Identities=12%  Similarity=0.037  Sum_probs=45.9

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      |.+++.||+||||+ .  . .                   .+ +.+.+.|++|+++|++++|+|+. ....+...++.++
T Consensus         1 Mikli~~DlDGTLl-~--~-~-------------------~~-~~~~~~l~~l~~~g~~~~i~Tgr-~~~~~~~~~~~~~   55 (249)
T 2zos_A            1 MIRLIFLDIDKTLI-P--G-Y-------------------EP-DPAKPIIEELKDMGFEIIFNSSK-TRAEQEYYRKELE   55 (249)
T ss_dssp             CEEEEEECCSTTTC-T--T-S-------------------CS-GGGHHHHHHHHHTTEEEEEBCSS-CHHHHHHHHHHHT
T ss_pred             CccEEEEeCCCCcc-C--C-C-------------------Cc-HHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHcC
Confidence            35789999999997 2  1 0                   11 34889999999999999999999 7888888888887


Q ss_pred             Cc
Q psy8911         205 LN  206 (280)
Q Consensus       205 l~  206 (280)
                      +.
T Consensus        56 ~~   57 (249)
T 2zos_A           56 VE   57 (249)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.74  E-value=3.5e-05  Score=65.26  Aligned_cols=58  Identities=16%  Similarity=0.049  Sum_probs=45.9

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      |.+++.||+||||++..                    .  .+-+...+.|++ +++|++++++|+. ....+...++.++
T Consensus         1 mikli~~DlDGTLl~~~--------------------~--~i~~~~~~al~~-~~~Gi~v~iaTGR-~~~~~~~~~~~l~   56 (268)
T 1nf2_A            1 MYRVFVFDLDGTLLNDN--------------------L--EISEKDRRNIEK-LSRKCYVVFASGR-MLVSTLNVEKKYF   56 (268)
T ss_dssp             CBCEEEEECCCCCSCTT--------------------S--CCCHHHHHHHHH-HTTTSEEEEECSS-CHHHHHHHHHHHS
T ss_pred             CccEEEEeCCCcCCCCC--------------------C--ccCHHHHHHHHH-HhCCCEEEEECCC-ChHHHHHHHHHhC
Confidence            35789999999998621                    1  133568889999 9999999999999 7777777888777


Q ss_pred             Cc
Q psy8911         205 LN  206 (280)
Q Consensus       205 l~  206 (280)
                      +.
T Consensus        57 ~~   58 (268)
T 1nf2_A           57 KR   58 (268)
T ss_dssp             SS
T ss_pred             CC
Confidence            64

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=97.70  E-value=2.8e-05  Score=65.45  Aligned_cols=36  Identities=11%  Similarity=0.230  Sum_probs=33.8

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      ++.+++++|++|++|++|||+.+|+.+++.+|+.++
T Consensus       192 ~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~  227 (261)
T 2rbk_A          192 IDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVA  227 (261)
T ss_dssp             HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEE
Confidence            899999999999999999999999999999998543

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.69  E-value=3.4e-05  Score=57.89  Aligned_cols=48  Identities=21%  Similarity=0.075  Sum_probs=37.6

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCC
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT  190 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~  190 (280)
                      +++.||+||||++.....               + ....+.+++.+.|+.|+++|++++++|+.
T Consensus         2 k~i~~DlDGTL~~~~~~~---------------~-~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR   49 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANTSD---------------Y-RNVLPRLDVIEQLREYHQLGFEIVISTAR   49 (126)
T ss_dssp             CEEEECSTTTTBCCCCSC---------------G-GGCCBCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred             CEEEEecCCCCCCCCCCc---------------c-ccCCCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence            678999999998632110               0 11356789999999999999999999999

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=97.66  E-value=0.0001  Score=73.84  Aligned_cols=97  Identities=8%  Similarity=-0.016  Sum_probs=69.7

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc----c---------------------eEecCCC
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN----K---------------------EIYPGPK  219 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~----~---------------------~~~~~~k  219 (280)
                      ++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+......    +                     .++..-.
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD-~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~  681 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGD-NKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE  681 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCC-CHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence            57799999999999999999999999 89999999999999754321    0                     1222211


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         220 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      |+.-..+.+.++-..+.++|+||+.+|+.+.++|++-.. +.+|
T Consensus       682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgia-mg~g  724 (995)
T 3ar4_A          682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIA-MGSG  724 (995)
T ss_dssp             SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEE-ETTS
T ss_pred             HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEE-eCCC
Confidence            222222223332235889999999999999999998644 3344

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.62  E-value=3.1e-05  Score=66.98  Aligned_cols=58  Identities=12%  Similarity=0.025  Sum_probs=45.3

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHH--hh
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL--NL  202 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l--~~  202 (280)
                      +.+++.||+||||++..                   ..  .+-+...+.|++|+++|++++++|+. ....+...+  +.
T Consensus        26 ~ikli~~DlDGTLl~~~-------------------~~--~is~~~~~al~~l~~~Gi~v~iaTGR-~~~~~~~~~~~~~   83 (301)
T 2b30_A           26 DIKLLLIDFDGTLFVDK-------------------DI--KVPSENIDAIKEAIEKGYMVSICTGR-SKVGILSAFGEEN   83 (301)
T ss_dssp             CCCEEEEETBTTTBCCT-------------------TT--CSCHHHHHHHHHHHHHTCEEEEECSS-CHHHHHHHHCHHH
T ss_pred             cccEEEEECCCCCcCCC-------------------CC--ccCHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHhhHHh
Confidence            36899999999998620                   11  23467899999999999999999999 777777677  65


Q ss_pred             CC
Q psy8911         203 IN  204 (280)
Q Consensus       203 ~g  204 (280)
                      ++
T Consensus        84 l~   85 (301)
T 2b30_A           84 LK   85 (301)
T ss_dssp             HH
T ss_pred             hc
Confidence            55

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=97.61  E-value=4e-05  Score=64.97  Aligned_cols=36  Identities=14%  Similarity=0.263  Sum_probs=31.3

Q ss_pred             hHHHHHHHHhCCCCccEEEEeCCcccccccccCCCe
Q psy8911          68 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  103 (280)
Q Consensus        68 ~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~  103 (280)
                      ..++.+++.+|++|++|++|||+.+|+++++.+|+.
T Consensus       200 ~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~  235 (279)
T 3mpo_A          200 GTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLG  235 (279)
T ss_dssp             HHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEE
T ss_pred             HHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCce
Confidence            349999999999999999999999999999999954

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=97.60  E-value=0.00013  Score=61.48  Aligned_cols=37  Identities=19%  Similarity=0.284  Sum_probs=33.5

Q ss_pred             HHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          69 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        69 ~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      .++.+++++|++|++|++|||+.+|+++++.+|+.+.
T Consensus       204 ~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va  240 (274)
T 3fzq_A          204 AIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIA  240 (274)
T ss_dssp             HHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEE
T ss_pred             HHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEE
Confidence            3999999999999999999999999999999995333

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.58  E-value=5.4e-05  Score=63.54  Aligned_cols=52  Identities=13%  Similarity=0.070  Sum_probs=40.5

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHH
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL  200 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l  200 (280)
                      .+++.||+||||++.                    ..  .+-+...+.|++|+++|++++++|++ ........+
T Consensus         4 ~kli~~DlDGTLl~~--------------------~~--~i~~~~~~~l~~l~~~g~~~~iaTGR-~~~~~~~~l   55 (246)
T 3f9r_A            4 RVLLLFDVDGTLTPP--------------------RL--CQTDEMRALIKRARGAGFCVGTVGGS-DFAKQVEQL   55 (246)
T ss_dssp             SEEEEECSBTTTBST--------------------TS--CCCHHHHHHHHHHHHTTCEEEEECSS-CHHHHHHHH
T ss_pred             ceEEEEeCcCCcCCC--------------------CC--ccCHHHHHHHHHHHHCCCEEEEECCC-CHHHHHHHh
Confidence            589999999999862                    11  23467899999999999999999999 665443333

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=97.54  E-value=0.00017  Score=60.37  Aligned_cols=36  Identities=22%  Similarity=0.267  Sum_probs=34.0

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      ++.+++.+|++|++|++|||+.+|+++++.+|+.++
T Consensus       188 l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~va  223 (258)
T 2pq0_A          188 IRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVA  223 (258)
T ss_dssp             HHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEE
T ss_pred             HHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEE
Confidence            899999999999999999999999999999999655

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=97.52  E-value=7.4e-05  Score=66.91  Aligned_cols=92  Identities=10%  Similarity=0.058  Sum_probs=63.0

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceec------------C---------C
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFP------------G---------Q   65 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~------------~---------~   65 (280)
                      +...+++|||++++++.|+++|++++|+|.+.. ..++.+.+.+|+..-+....|++            +         .
T Consensus       216 ~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~-~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~  294 (385)
T 4gxt_A          216 YFVGIRTLDEMVDLYRSLEENGIDCYIVSASFI-DIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISI  294 (385)
T ss_dssp             EEECCEECHHHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCS
T ss_pred             eccCceeCHHHHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeC
Confidence            344567999999999999999999999999999 99999999987633221101111            0         1


Q ss_pred             ChhHHHHHHHHh--CCCCccEEEEeCCccccccccc
Q psy8911          66 KTTHFANLKKAT--GIEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        66 ~~~~~~~~~~~~--g~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      ..++-..+.+-.  ......++++|||..|+..-++
T Consensus       295 ~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~  330 (385)
T 4gxt_A          295 REGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKE  330 (385)
T ss_dssp             THHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHH
T ss_pred             CCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhc
Confidence            112222222211  2345569999999999887765

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=97.50  E-value=8.9e-05  Score=67.02  Aligned_cols=120  Identities=13%  Similarity=0.119  Sum_probs=79.4

Q ss_pred             cceeEEEecCCCCCCcccccc--------c-CcccccC---CeeEc------cCCceeccCCCHHHHHHHHhhCCcEEEE
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDL--------V-APFKKIG---QKVMD------AKGTLIKYYRGVPEILRYLKENKCLVAA  186 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~--------~-~~~~~~~---~~~~~------~~~~~~~~~~g~~~~L~~L~~~g~~~~i  186 (280)
                      ....+++|||.||+.+.....        . +......   .....      .+...+.+.||+.++|+.++ +.|.++|
T Consensus        25 ~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls-~~yEivI  103 (442)
T 3ef1_A           25 KRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYELHI  103 (442)
T ss_dssp             TCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHT-TTEEEEE
T ss_pred             CCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHh-CCcEEEE
Confidence            345789999999987643321        0 1111000   00110      12335778899999999999 5699999


Q ss_pred             EcCCCcHHHHHHHHhhCCCcc-ccccceEecCCCHHHHHHHHHH-cCCCCCcEEEEeCCcCC
Q psy8911         187 ASRTSEILHAKQILNLINLNQ-YFSNKEIYPGPKTTHFESLKKA-TGIEYKDMVFFDDEERN  246 (280)
Q Consensus       187 ~T~~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~k~~~~~~~~~~-~~~~~~~~l~igD~~~d  246 (280)
                      .|.+ .+.++..+++.++-.. ||.....+...-...+.+=+.+ +|.+.+.+|+|+|++.-
T Consensus       104 fTas-~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~~~KdL~~ll~rdl~~vvIIDd~p~~  164 (442)
T 3ef1_A          104 YTMG-TKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDTSMVVVIDDRGDV  164 (442)
T ss_dssp             ECSS-CHHHHHHHHHHHCTTSTTTTTCEECTTTSSCSSCCCGGGTCSSCCTTEEEEESCSGG
T ss_pred             EcCC-CHHHHHHHHHHhccCCccccceEEEecCCCCceeeehHHhcCCCcceEEEEECCHHH
Confidence            9999 9999999999999886 7876433221111112233444 48899999999999863

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=97.46  E-value=4.3e-05  Score=66.94  Aligned_cols=93  Identities=13%  Similarity=0.096  Sum_probs=63.9

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-c---------------------CCC--
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-P---------------------GPK--  219 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-~---------------------~~k--  219 (280)
                      ..+++++.++|+.|++ |++++++|+. ...++....+.+++.+++...... .                     .+.  
T Consensus       102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~  179 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQE-RWTPVVISTS-YTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE  179 (332)
T ss_dssp             CCBCTTHHHHHHHHHT-TCEEEEEEEE-EHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred             CCCHHHHHHHHHHHHc-CCcEEEEECC-ceEEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHH
Confidence            4678999999999999 9999999998 766777677777764333110000 0                     010  


Q ss_pred             -------------HHHHH----------HHHHHcCCCCCc----EEEEeCCcCCccccccc----CceEE
Q psy8911         220 -------------TTHFE----------SLKKATGIEYKD----MVFFDDEERNSHDVSPL----GVTCI  258 (280)
Q Consensus       220 -------------~~~~~----------~~~~~~~~~~~~----~l~igD~~~di~~a~~a----G~~~i  258 (280)
                                   +..+.          +.....++++++    +++|||+.+|+.+++.|    |+.++
T Consensus       180 ~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~va  249 (332)
T 1y8a_A          180 LFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIA  249 (332)
T ss_dssp             HHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEE
Confidence                         11122          111112778899    99999999999999999    99754

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=97.45  E-value=0.00017  Score=69.81  Aligned_cols=85  Identities=11%  Similarity=0.130  Sum_probs=67.3

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      ++.|++.+.|+.|+++|+++.++|..+. ..++.+.+.+|+.++|.  .+...+|.    .+.+.++-..+.++||||+.
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~-~~a~~ia~~lgi~~v~a--~~~P~~K~----~~v~~l~~~g~~V~~vGDG~  626 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSK-RTAEAVAGTLGIKKVVA--EIMPEDKS----RIVSELKDKGLIVAMAGDGV  626 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCH-HHHHHHHHHHTCCCEEC--SCCHHHHH----HHHHHHHHHSCCEEEEECSS
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCCEEEE--ecCHHHHH----HHHHHHHhcCCEEEEEECCh
Confidence            4679999999999999999999999999 89999999999877665  33222222    22233333467899999999


Q ss_pred             ccccccccCCCe
Q psy8911          92 RNSHDVSPLGVT  103 (280)
Q Consensus        92 ~~i~aa~~~G~~  103 (280)
                      +|+.+-+.+++-
T Consensus       627 ND~paL~~AdvG  638 (736)
T 3rfu_A          627 NDAPALAKADIG  638 (736)
T ss_dssp             TTHHHHHHSSEE
T ss_pred             HhHHHHHhCCEE
Confidence            999999999954

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=97.42  E-value=0.00043  Score=69.42  Aligned_cols=93  Identities=8%  Similarity=-0.005  Sum_probs=68.8

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccc-------------------------cceecCCC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDH-------------------------KQIFPGQK   66 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~-------------------------~~i~~~~~   66 (280)
                      ++.|++.+.|+.|+++|+++.++|.... ..++.+.+.+|+....+.                         ..+++.-.
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~-~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~  681 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNK-GTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE  681 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCH-HHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence            5789999999999999999999999999 899999999999654321                         01222211


Q ss_pred             hhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          67 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        67 ~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      +..-..+.+.++-..+.++|+||+.+|+.+.++|++-..
T Consensus       682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgia  720 (995)
T 3ar4_A          682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIA  720 (995)
T ss_dssp             SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEE
T ss_pred             HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEE
Confidence            222223333333335889999999999999999998544

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=97.38  E-value=0.00017  Score=62.03  Aligned_cols=89  Identities=7%  Similarity=0.018  Sum_probs=63.9

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceec---------------CCC------h
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFP---------------GQK------T   67 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~---------------~~~------~   67 (280)
                      ..+++.||+.++++.|+++|+++.++|.+.. ..++.+.+.+|+...-.  .+++               ..-      .
T Consensus       138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~-~~i~~i~~~~g~~~~~~--~i~~n~l~~~~~~~~~~~~~~~i~~~~k~  214 (297)
T 4fe3_A          138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIG-DVLEEVIRQAGVYHSNV--KVVSNFMDFDENGVLKGFKGELIHVFNKH  214 (297)
T ss_dssp             SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEH-HHHHHHHHHTTCCCTTE--EEEEECEEECTTSBEEEECSSCCCTTCHH
T ss_pred             cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcH-HHHHHHHHHcCCCcccc--eEEeeeEEEcccceeEeccccccchhhcc
Confidence            3578999999999999999999999999999 89999999998753221  1111               110      1


Q ss_pred             hHHHHHH--HHhCCCCccEEEEeCCcccccccccC
Q psy8911          68 THFANLK--KATGIEYKDMVFFDDEERNSHDVSPL  100 (280)
Q Consensus        68 ~~~~~~~--~~~g~~p~~~l~v~D~~~~i~aa~~~  100 (280)
                      ..-.+..  ..+.-...+++|+||+.+|+.+++.+
T Consensus       215 ~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l  249 (297)
T 4fe3_A          215 DGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGV  249 (297)
T ss_dssp             HHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred             cHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence            1111211  23334567899999999999997744

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=97.23  E-value=0.0001  Score=64.54  Aligned_cols=93  Identities=14%  Similarity=0.110  Sum_probs=62.6

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-ccc-c--------------------eecCCC--
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-DHK-Q--------------------IFPGQK--   66 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d~~-~--------------------i~~~~~--   66 (280)
                      ..++|++.++|+.|++ |++++++|+... ..+....+.+++.+++ ... .                    ......  
T Consensus       102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~  179 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQE-RWTPVVISTSYT-QYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE  179 (332)
T ss_dssp             CCBCTTHHHHHHHHHT-TCEEEEEEEEEH-HHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred             CCCHHHHHHHHHHHHc-CCcEEEEECCce-EEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHH
Confidence            4679999999999999 999999999886 5666666666653322 100 0                    000000  


Q ss_pred             -------------hhHHH----------HHHHHhCCCCcc----EEEEeCCcccccccccC----CCeEE
Q psy8911          67 -------------TTHFA----------NLKKATGIEYKD----MVFFDDEERNSHDVSPL----GVTCI  105 (280)
Q Consensus        67 -------------~~~~~----------~~~~~~g~~p~~----~l~v~D~~~~i~aa~~~----G~~~i  105 (280)
                                   ...|.          +.....|+++++    |++|||+.+|+.+++.+    |+.++
T Consensus       180 ~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~va  249 (332)
T 1y8a_A          180 LFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIA  249 (332)
T ss_dssp             HHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEE
Confidence                         01122          111112778999    99999999999999999    99644

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=97.22  E-value=0.0001  Score=62.83  Aligned_cols=41  Identities=15%  Similarity=0.221  Sum_probs=35.3

Q ss_pred             hHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          68 THFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        68 ~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      ...+.+++.+|++|+++++|||+.+|+++++.+|+. +.+.+
T Consensus       214 ~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~-vam~n  254 (283)
T 3dao_A          214 TALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGIS-YAVSN  254 (283)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EEETT
T ss_pred             HHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCE-EEcCC
Confidence            349999999999999999999999999999999954 44433

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.20  E-value=0.00035  Score=59.00  Aligned_cols=44  Identities=16%  Similarity=0.311  Sum_probs=39.2

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +|+..+..+++++|++|+++++|||+.+|+..++.+|+. +.+.+
T Consensus       190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~-v~~~n  233 (268)
T 1nf2_A          190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAMEN  233 (268)
T ss_dssp             CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EECTT
T ss_pred             ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCE-EEecC
Confidence            677889999999999999999999999999999999994 44443

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.17  E-value=0.00029  Score=59.97  Aligned_cols=79  Identities=16%  Similarity=0.237  Sum_probs=50.5

Q ss_pred             HHHCCceEEEecCCCchHHHHHHHhhcC--cccccc-------ccceecC--CChhHHHHHHHHhCCCCccEEEEeCCcc
Q psy8911          24 LKQNNCLVAAASRTSEIQGAQQLLDLFN--WNQYFD-------HKQIFPG--QKTTHFANLKKATGIEYKDMVFFDDEER   92 (280)
Q Consensus        24 L~~~g~~~~i~Sn~~~~~~~~~~l~~~~--l~~~fd-------~~~i~~~--~~~~~~~~~~~~~g~~p~~~l~v~D~~~   92 (280)
                      +...++...++++.+. +..+.+.+.+.  +.+.+.       ...+...  +|....+.+++.+|++|++|++|||+.+
T Consensus       158 ~~~~~i~ki~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~N  236 (285)
T 3pgv_A          158 LDPQGISKVFFTCEDH-EHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMN  236 (285)
T ss_dssp             SCCSSEEEEEEECSCH-HHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred             cCCCCceEEEEeCCCH-HHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHh
Confidence            3445666667776555 44444433331  112222       0012221  2333499999999999999999999999


Q ss_pred             cccccccCCCe
Q psy8911          93 NSHDVSPLGVT  103 (280)
Q Consensus        93 ~i~aa~~~G~~  103 (280)
                      |++.++.+|+.
T Consensus       237 Di~ml~~ag~~  247 (285)
T 3pgv_A          237 DAEMLSMAGKG  247 (285)
T ss_dssp             GHHHHHHSSEE
T ss_pred             hHHHHHhcCCE
Confidence            99999999943

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=97.15  E-value=0.00033  Score=58.24  Aligned_cols=58  Identities=17%  Similarity=0.056  Sum_probs=44.1

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      +++.+|+||||++....                 .....+-+...+.|++|+++| +++++|+. ....+...++.+
T Consensus         2 kli~~DlDGTLl~~~~~-----------------~~~~~i~~~~~~al~~l~~~g-~v~iaTGR-~~~~~~~~~~~l   59 (239)
T 1u02_A            2 SLIFLDYDGTLVPIIMN-----------------PEESYADAGLLSLISDLKERF-DTYIVTGR-SPEEISRFLPLD   59 (239)
T ss_dssp             CEEEEECBTTTBCCCSC-----------------GGGCCCCHHHHHHHHHHHHHS-EEEEECSS-CHHHHHHHSCSS
T ss_pred             eEEEEecCCCCcCCCCC-----------------cccCCCCHHHHHHHHHHhcCC-CEEEEeCC-CHHHHHHHhccc
Confidence            57899999999863110                 011234578999999999999 99999999 777777777765

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=97.07  E-value=0.0013  Score=66.17  Aligned_cols=90  Identities=10%  Similarity=0.046  Sum_probs=67.4

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc------------------------ccc--------
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF------------------------SNK--------  212 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f------------------------~~~--------  212 (280)
                      ++.|++.+.|+.|+++|+++.++|+. ....+..+.+.+||...-                        ..+        
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD-~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~  677 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGD-HPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD  677 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCC-CHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence            57799999999999999999999999 899999999999987310                        000        


Q ss_pred             ---------------eEecCCCHHH---HHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEE
Q psy8911         213 ---------------EIYPGPKTTH---FESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  258 (280)
Q Consensus       213 ---------------~~~~~~k~~~---~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i  258 (280)
                                     .++....|+.   +.+.+++.|   +.++|+||+.+|+.+-++|++-..
T Consensus       678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g---~~V~~iGDG~ND~paLk~AdvGIA  738 (1028)
T 2zxe_A          678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQG---AIVAVTGDGVNDSPALKKADIGVA  738 (1028)
T ss_dssp             CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHHSSEEEE
T ss_pred             CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCC---CEEEEEcCCcchHHHHHhCCceEE
Confidence                           1233333322   333444443   679999999999999999988754

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=97.05  E-value=0.00033  Score=60.98  Aligned_cols=96  Identities=13%  Similarity=0.004  Sum_probs=71.8

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccc--cceecC--------CChh-HHHHHHHHh-
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDH--KQIFPG--------QKTT-HFANLKKAT-   77 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~--~~i~~~--------~~~~-~~~~~~~~~-   77 (280)
                      .+...||+.++|+.+.+ .|.++|.|++.. ..++.+++.++....+++  ..+..+        .+.+ .|.+-++.+ 
T Consensus       162 ~~~~RP~l~eFL~~l~~-~yeivIfTas~~-~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw  239 (320)
T 3shq_A          162 TELMRPYLHEFLTSAYE-DYDIVIWSATSM-RWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIW  239 (320)
T ss_dssp             HHHBCTTHHHHHHHHHH-HEEEEEECSSCH-HHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHH
T ss_pred             ceEeCCCHHHHHHHHHh-CCEEEEEcCCcH-HHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhh
Confidence            46789999999999995 699999999999 999999999987766431  111111        1112 355666666 


Q ss_pred             ----CCCCccEEEEeCCcccccccccCCCeEEEE
Q psy8911          78 ----GIEYKDMVFFDDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        78 ----g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v  107 (280)
                          |.+++++|+|||++.........|+...-+
T Consensus       240 ~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~I~~~  273 (320)
T 3shq_A          240 ALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPF  273 (320)
T ss_dssp             HHCTTCCGGGEEEEESCGGGGTTSGGGEEECCCC
T ss_pred             cccCCCChhHEEEEeCChHHhccCcCceEEeCeE
Confidence                899999999999999877776666554433

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=97.04  E-value=0.00063  Score=58.50  Aligned_cols=35  Identities=11%  Similarity=0.108  Sum_probs=33.0

Q ss_pred             HHHHHHHHhCCCCccEEEEeCCcccccccccCCCe
Q psy8911          69 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  103 (280)
Q Consensus        69 ~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~  103 (280)
                      ..+.+++++|++|++|++|||+.+|+++++.+|+.
T Consensus       232 al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~  266 (304)
T 3l7y_A          232 ALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYS  266 (304)
T ss_dssp             HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEE
T ss_pred             HHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCe
Confidence            49999999999999999999999999999999954

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=96.93  E-value=0.00058  Score=61.69  Aligned_cols=93  Identities=12%  Similarity=0.106  Sum_probs=69.6

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc-cccccceecCCChhH-HHHHHHH-hCCCCccEEE
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ-YFDHKQIFPGQKTTH-FANLKKA-TGIEYKDMVF   86 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~-~fd~~~i~~~~~~~~-~~~~~~~-~g~~p~~~l~   86 (280)
                      .+...||+.++|+.+. +.|.++|.|++.. ..+..+++.++..+ ||.+ .+++.+..+. |.+-+.+ +|.+.+.+|+
T Consensus        81 ~V~~RPgl~eFL~~ls-~~yEivIfTas~~-~YA~~Vl~~LDp~~~~f~~-Rl~sRd~cg~~~~KdL~~ll~rdl~~vvI  157 (442)
T 3ef1_A           81 YIKFRPGLAQFLQKIS-ELYELHIYTMGTK-AYAKEVAKIIDPTGKLFQD-RVLSRDDSGSLAQKSLRRLFPCDTSMVVV  157 (442)
T ss_dssp             EEEECTTHHHHHHHHT-TTEEEEEECSSCH-HHHHHHHHHHCTTSTTTTT-CEECTTTSSCSSCCCGGGTCSSCCTTEEE
T ss_pred             EEEeCCCHHHHHHHHh-CCcEEEEEcCCCH-HHHHHHHHHhccCCccccc-eEEEecCCCCceeeehHHhcCCCcceEEE
Confidence            4788999999999999 5799999999999 99999999998877 7883 2443333332 3333443 4899999999


Q ss_pred             EeCCcccccccccCCCeEEEEcC
Q psy8911          87 FDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        87 v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      |||++.-...-   . ++|.|.+
T Consensus       158 IDd~p~~~~~~---p-N~I~I~~  176 (442)
T 3ef1_A          158 IDDRGDVWDWN---P-NLIKVVP  176 (442)
T ss_dssp             EESCSGGGTTC---T-TEEECCC
T ss_pred             EECCHHHhCCC---C-CEEEcCC
Confidence            99998543221   3 6777644

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=96.82  E-value=0.00074  Score=56.24  Aligned_cols=45  Identities=11%  Similarity=0.090  Sum_probs=40.0

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +|...+..+++++|++++++++|||+.+|+..++.+|+. +.+.++
T Consensus       162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~na  206 (244)
T 1s2o_A          162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRNA  206 (244)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTTC
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEEcCC
Confidence            788899999999999999999999999999999999984 666443

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=96.76  E-value=0.001  Score=57.30  Aligned_cols=45  Identities=20%  Similarity=0.198  Sum_probs=40.6

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +|...+..+++++|++++++++|||+.+|+..++.+|+. +.+.++
T Consensus       224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na  268 (301)
T 2b30_A          224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANA  268 (301)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTC
T ss_pred             CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCC
Confidence            778889999999999999999999999999999999995 556654

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=96.74  E-value=0.00054  Score=57.44  Aligned_cols=38  Identities=13%  Similarity=0.013  Sum_probs=34.3

Q ss_pred             HHHHHHHHhCCCC--ccEEEEeCCcccccccccCCCeEEEE
Q psy8911          69 HFANLKKATGIEY--KDMVFFDDEERNSHDVSPLGVTCILV  107 (280)
Q Consensus        69 ~~~~~~~~~g~~p--~~~l~v~D~~~~i~aa~~~G~~~i~v  107 (280)
                      ..+.+++.+|+++  ++|++|||+.+|+.+++.+|+. +.+
T Consensus       180 ~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~-va~  219 (259)
T 3zx4_A          180 AVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLA-VYV  219 (259)
T ss_dssp             HHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEE-EEC
T ss_pred             HHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCe-EEe
Confidence            3899999999999  9999999999999999999975 444

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.73  E-value=0.0016  Score=54.76  Aligned_cols=53  Identities=17%  Similarity=0.115  Sum_probs=40.0

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHh
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILN  201 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~  201 (280)
                      ..+++.+|+||||++.                    ..  .+-+...+.|++|+++ ++++|+|+. ....+...+.
T Consensus        12 ~~kli~~DlDGTLl~~--------------------~~--~is~~~~~al~~l~~~-i~v~iaTGR-~~~~~~~~l~   64 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPA--------------------RQ--KIDPEVAAFLQKLRSR-VQIGVVGGS-DYCKIAEQLG   64 (262)
T ss_dssp             -CEEEEEESBTTTBST--------------------TS--CCCHHHHHHHHHHTTT-SEEEEECSS-CHHHHHHHHS
T ss_pred             CeEEEEEeCccCCCCC--------------------CC--cCCHHHHHHHHHHHhC-CEEEEEcCC-CHHHHHHHHh
Confidence            3589999999999862                    11  1336789999999999 999999999 6665554443

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.71  E-value=0.0017  Score=53.99  Aligned_cols=47  Identities=13%  Similarity=0.123  Sum_probs=36.8

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHH
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHA  196 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~  196 (280)
                      .+++.+|+||||++.                    ..  .+-+...+.|++|+++ ++++++|+. ....+
T Consensus         6 ~kli~~DlDGTLl~~--------------------~~--~i~~~~~~al~~l~~~-i~v~iaTGR-~~~~~   52 (246)
T 2amy_A            6 PALCLFDVDGTLTAP--------------------RQ--KITKEMDDFLQKLRQK-IKIGVVGGS-DFEKV   52 (246)
T ss_dssp             SEEEEEESBTTTBCT--------------------TS--CCCHHHHHHHHHHTTT-SEEEEECSS-CHHHH
T ss_pred             ceEEEEECCCCcCCC--------------------Cc--ccCHHHHHHHHHHHhC-CeEEEEcCC-CHHHH
Confidence            478999999999862                    11  1336789999999999 999999999 55443

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=96.63  E-value=0.0017  Score=64.36  Aligned_cols=94  Identities=7%  Similarity=0.042  Sum_probs=68.2

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc-cc----------------------ceEecC--CC
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SN----------------------KEIYPG--PK  219 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f-~~----------------------~~~~~~--~k  219 (280)
                      ++.|++.+.++.|++.|+++.++|+- .+..+..+.+.+||.... +.                      ..++..  |.
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD-~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~  613 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGD-AVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ  613 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESS-CHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCC-CHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence            57799999999999999999999999 899999999999996321 10                      011222  32


Q ss_pred             -HHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         220 -TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       220 -~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                       +..+.+.+++.|   +.+.|+||+.||..+-++|++-.. +..|
T Consensus       614 ~K~~iV~~Lq~~g---~~Vam~GDGvNDapaLk~AdvGIA-mg~g  654 (920)
T 1mhs_A          614 HKYNVVEILQQRG---YLVAMTGDGVNDAPSLKKADTGIA-VEGS  654 (920)
T ss_dssp             HHHHHHHHHHTTT---CCCEECCCCGGGHHHHHHSSEEEE-ETTS
T ss_pred             HHHHHHHHHHhCC---CeEEEEcCCcccHHHHHhCCcCcc-cccc
Confidence             222333444444   789999999999999998887644 3444

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=96.61  E-value=0.007  Score=49.98  Aligned_cols=98  Identities=14%  Similarity=0.158  Sum_probs=71.8

Q ss_pred             HHHHHHHHHC-CceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhH---HHHHHHHhCCCCccEEEEeCCccc
Q psy8911          18 PGILKYLKQN-NCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTH---FANLKKATGIEYKDMVFFDDEERN   93 (280)
Q Consensus        18 ~~~l~~L~~~-g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~---~~~~~~~~g~~p~~~l~v~D~~~~   93 (280)
                      ...|....++ +.-=.++|++.- ..+-..+=.+++..+|+..-|+++.++++   |+++.+++| +.-.-++|||+...
T Consensus       165 ~k~L~~i~sr~~~vNVLVTs~qL-VPaLaK~LLygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eE  242 (274)
T 3geb_A          165 LKALNLINSRPNCVNVLVTTTQL-IPALAKVLLYGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEE  242 (274)
T ss_dssp             HHHHHHHHHSTTEEEEEEESSCH-HHHHHHHHHTTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHH
T ss_pred             HHHHHhhccCCceeEEEEecCch-HHHHHHHHHhhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHH
Confidence            4444445444 333466676665 33334444568889999888999988876   999999998 55778899999999


Q ss_pred             ccccccCCCeEEEEcCCCchhhhh
Q psy8911          94 SHDVSPLGVTCILVEDGMTNAITL  117 (280)
Q Consensus        94 i~aa~~~G~~~i~v~~~~~~~~~~  117 (280)
                      -+||+..+|+-+-+....+...+.
T Consensus       243 e~AAk~~n~PFwrI~~h~Dl~~l~  266 (274)
T 3geb_A          243 EQGAKKHNMPFWRISCHADLEALR  266 (274)
T ss_dssp             HHHHHHTTCCEEECCSHHHHHHHH
T ss_pred             HHHHHHcCCCeEEeecCccHHHHH
Confidence            999999999999886655544443

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=96.53  E-value=0.0052  Score=61.84  Aligned_cols=41  Identities=15%  Similarity=0.097  Sum_probs=38.2

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      ++.|++.+.|+.|+++|+++.++|+. ....+..+.+.+|+.
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd-~~~tA~~ia~~lgi~  644 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGD-HPITAKAIAASVGII  644 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHcCCC
Confidence            57799999999999999999999999 899999999999984

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=96.50  E-value=0.0008  Score=66.42  Aligned_cols=88  Identities=7%  Similarity=0.025  Sum_probs=63.7

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccc-c-------------------cc----ceEecCCCH
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQY-F-------------------SN----KEIYPGPKT  220 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~-f-------------------~~----~~~~~~~k~  220 (280)
                      ++.|++.+.++.|++.|+++.++|+- .+..+..+.+.+|+..- +                   +.    ..++..-.|
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD-~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P  566 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP  566 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESS-CHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCC-ChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence            46799999999999999999999999 89999999999999531 0                   00    011222222


Q ss_pred             ---HHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         221 ---THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       221 ---~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                         ..+.+.+++.|   +.+.|+||+.+|..+-++|++-
T Consensus       567 ~~K~~iV~~lq~~g---~~Vam~GDGvNDapaLk~AdvG  602 (885)
T 3b8c_A          567 EHKYEIVKKLQERK---HIVGMTGDGVNDAPALKKADIG  602 (885)
T ss_dssp             HHHHHHHHHHHHTT---CCCCBCCCSSTTHHHHHHSSSC
T ss_pred             HHHHHHHHHHHHCC---CeEEEEcCCchhHHHHHhCCEe
Confidence               22333334434   7899999999999988887654

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=96.47  E-value=0.0015  Score=55.55  Aligned_cols=40  Identities=13%  Similarity=0.196  Sum_probs=36.3

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++.+++.+|++|++|++|||+.+|+.+++.+|+ ++.+.++
T Consensus       221 ~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~  260 (288)
T 1nrw_A          221 LKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNA  260 (288)
T ss_dssp             HHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTC
T ss_pred             HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCC
Confidence            899999999999999999999999999999999 6666543

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=96.39  E-value=0.0017  Score=54.46  Aligned_cols=37  Identities=5%  Similarity=0.104  Sum_probs=33.7

Q ss_pred             HHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          69 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        69 ~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      ..+.+++.+|++|++|++|||+.+|+++++.+|+.++
T Consensus       198 ~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~va  234 (268)
T 3r4c_A          198 GLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVA  234 (268)
T ss_dssp             HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             HHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEE
Confidence            3899999999999999999999999999999996533

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=96.28  E-value=0.012  Score=59.11  Aligned_cols=91  Identities=9%  Similarity=0.019  Sum_probs=67.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc------------------------c----------
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF------------------------D----------   57 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f------------------------d----------   57 (280)
                      ++.|++.+.|+.|+++|+++.++|..+. ..+..+.+.+|+...-                        .          
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~-~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~  677 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHP-ITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD  677 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCH-HHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence            5789999999999999999999999999 8999999999886210                        0          


Q ss_pred             -----------cc--ceecCCChhH---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          58 -----------HK--QIFPGQKTTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        58 -----------~~--~i~~~~~~~~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                                 ..  .+++...+..   ....+++.|   +.++++||+.+|+.+-++|++-...
T Consensus       678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g---~~V~~iGDG~ND~paLk~AdvGIAm  739 (1028)
T 2zxe_A          678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQG---AIVAVTGDGVNDSPALKKADIGVAM  739 (1028)
T ss_dssp             CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCC---CEEEEEcCCcchHHHHHhCCceEEe
Confidence                       00  1333222222   444444444   6799999999999999999876653

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=96.26  E-value=0.014  Score=48.21  Aligned_cols=101  Identities=17%  Similarity=0.271  Sum_probs=74.4

Q ss_pred             HHHHHHhh-CCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecC---CCHHHHHHHHHHcCCCCCcEEEEeCCcCCc
Q psy8911         172 EILRYLKE-NKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPG---PKTTHFESLKKATGIEYKDMVFFDDEERNS  247 (280)
Q Consensus       172 ~~L~~L~~-~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~l~igD~~~di  247 (280)
                      ..|..... .+..=+++|++ ....+-..+=-+||..+|..-.+++.   .|..-|+.+.+|+| +.-.-++|||....-
T Consensus       166 k~L~~i~sr~~~vNVLVTs~-qLVPaLaK~LLygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eEe  243 (274)
T 3geb_A          166 KALNLINSRPNCVNVLVTTT-QLIPALAKVLLYGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEEE  243 (274)
T ss_dssp             HHHHHHHHSTTEEEEEEESS-CHHHHHHHHHHTTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHHH
T ss_pred             HHHHhhccCCceeEEEEecC-chHHHHHHHHHhhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHHH
Confidence            33433333 34566778888 65555555555799999986555554   45567999999998 557888999999999


Q ss_pred             ccccccCceEEEECCCCCHHHHHHHHH
Q psy8911         248 HDVSPLGVTCIHVKKGMSHAVLQKGLK  274 (280)
Q Consensus       248 ~~a~~aG~~~i~v~~g~~~~~~~~~~~  274 (280)
                      ++|++.+++++-|....+...+..+++
T Consensus       244 ~AAk~~n~PFwrI~~h~Dl~~l~~al~  270 (274)
T 3geb_A          244 QGAKKHNMPFWRISCHADLEALRHALE  270 (274)
T ss_dssp             HHHHHTTCCEEECCSHHHHHHHHHHHH
T ss_pred             HHHHHcCCCeEEeecCccHHHHHHhhc
Confidence            999999999999987666666666654

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=96.11  E-value=0.0047  Score=61.16  Aligned_cols=91  Identities=7%  Similarity=-0.022  Sum_probs=67.5

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-cc----------------------cceecCC---
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-DH----------------------KQIFPGQ---   65 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d~----------------------~~i~~~~---   65 (280)
                      ++.|++.+.++.|+++|+++.++|.-+. ..++.+-+.+|+.... +.                      ..++..-   
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~-~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~  613 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAV-GIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ  613 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCH-HHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCH-HHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence            6789999999999999999999999999 8999999999985321 10                      0122221   


Q ss_pred             ChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          66 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        66 ~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      +.....+.+++.|   +.+.|+||+.+|+.+-++|++-...
T Consensus       614 ~K~~iV~~Lq~~g---~~Vam~GDGvNDapaLk~AdvGIAm  651 (920)
T 1mhs_A          614 HKYNVVEILQQRG---YLVAMTGDGVNDAPSLKKADTGIAV  651 (920)
T ss_dssp             HHHHHHHHHHTTT---CCCEECCCCGGGHHHHHHSSEEEEE
T ss_pred             HHHHHHHHHHhCC---CeEEEEcCCcccHHHHHhCCcCccc
Confidence            1122444445444   7899999999999999988875543

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=96.09  E-value=0.003  Score=52.65  Aligned_cols=47  Identities=9%  Similarity=-0.151  Sum_probs=41.0

Q ss_pred             CCCHHHHHHHHHHcCC-CCCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         217 GPKTTHFESLKKATGI-EYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       217 ~~k~~~~~~~~~~~~~-~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      -.|...+..+++++++ +++++++|||+.+|+...+.+|+. +.+.++.
T Consensus       178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna~  225 (249)
T 2zos_A          178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLK  225 (249)
T ss_dssp             CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCC
T ss_pred             CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCCC
Confidence            3677889999999998 999999999999999999999985 6676554

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=95.94  E-value=0.0042  Score=52.71  Aligned_cols=40  Identities=20%  Similarity=0.349  Sum_probs=35.4

Q ss_pred             HHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          69 HFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        69 ~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      ..+.+++.+|++|++|++|||+.+|+.+++.+|+ ++.+.+
T Consensus       202 ~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n  241 (282)
T 1rkq_A          202 GVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDN  241 (282)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTT
T ss_pred             HHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecC
Confidence            3899999999999999999999999999999998 455543

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=95.78  E-value=0.0049  Score=60.87  Aligned_cols=90  Identities=6%  Similarity=-0.039  Sum_probs=65.3

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc-ccc-----------------------cceecCCCh
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY-FDH-----------------------KQIFPGQKT   67 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~-fd~-----------------------~~i~~~~~~   67 (280)
                      ++.|++.+.++.|+++|+++.++|.... ..++.+-+.+|+..- ++.                       ..++..-.+
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~-~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P  566 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP  566 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCH-HHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCCh-HHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence            5689999999999999999999999999 899999999998431 110                       012222111


Q ss_pred             -hH--HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          68 -TH--FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        68 -~~--~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                       .+  .-+.+++.|   +.+.|+||+.+|..+-++|++-..
T Consensus       567 ~~K~~iV~~lq~~g---~~Vam~GDGvNDapaLk~AdvGIA  604 (885)
T 3b8c_A          567 EHKYEIVKKLQERK---HIVGMTGDGVNDAPALKKADIGIA  604 (885)
T ss_dssp             HHHHHHHHHHHHTT---CCCCBCCCSSTTHHHHHHSSSCCC
T ss_pred             HHHHHHHHHHHHCC---CeEEEEcCCchhHHHHHhCCEeEE
Confidence             12  444444544   789999999999988888876543

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=95.74  E-value=0.0033  Score=53.23  Aligned_cols=46  Identities=11%  Similarity=-0.009  Sum_probs=41.7

Q ss_pred             CCHHHHHHHHHHcC-CCCCc--EEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         218 PKTTHFESLKKATG-IEYKD--MVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       218 ~k~~~~~~~~~~~~-~~~~~--~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      +|...+..+++++| +++++  +++|||+.+|+...+.+|+. +.+.++.
T Consensus       189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~  237 (275)
T 1xvi_A          189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLN  237 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC
T ss_pred             CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCC
Confidence            77788999999999 99999  99999999999999999985 8887765

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=95.56  E-value=0.026  Score=56.81  Aligned_cols=41  Identities=10%  Similarity=-0.011  Sum_probs=38.0

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN   53 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~   53 (280)
                      ++.|++.+.|+.|+++|+++.++|..+. ..+..+.+.+|+.
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~-~tA~~ia~~lgi~  644 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGDHP-ITAKAIAASVGII  644 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHcCCC
Confidence            5789999999999999999999999999 8899999999874

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=95.42  E-value=0.01  Score=49.21  Aligned_cols=42  Identities=12%  Similarity=0.104  Sum_probs=35.9

Q ss_pred             ChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEc
Q psy8911          66 KTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        66 ~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~  108 (280)
                      |....+.+++.+|++++++++|||+.+|+.+++.+|+. +.+.
T Consensus       163 K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~  204 (244)
T 1s2o_A          163 KGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVR  204 (244)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECT
T ss_pred             hHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEEc
Confidence            33449999999999999999999999999999999874 5553

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=95.07  E-value=0.038  Score=41.95  Aligned_cols=76  Identities=16%  Similarity=0.097  Sum_probs=47.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCc--hHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHhCCCCccEEEEe
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSE--IQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKATGIEYKDMVFFD   88 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~g~~p~~~l~v~   88 (280)
                      ++.|++.+.|+.|+++|+.++|+|+.+.  ...+...++.+++.  ++  .+... ++...   ......-.|..-+|||
T Consensus        24 ~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~--~~--~I~~n~P~~~~---~~~~~~rK~~~~~fID   96 (142)
T 2obb_A           24 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FY--AANKDYPEEER---DHQGFSRKLKADLFID   96 (142)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CS--EESSSSTTC------CCSCCSSCCCSEEEC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC--eE--EEEcCCchhhh---cchhhcCCcCCCEEee
Confidence            5678999999999999999999999873  13445556666663  23  23222 11111   1111123467788899


Q ss_pred             CCcccc
Q psy8911          89 DEERNS   94 (280)
Q Consensus        89 D~~~~i   94 (280)
                      |+..+.
T Consensus        97 DR~~~~  102 (142)
T 2obb_A           97 DRNVGG  102 (142)
T ss_dssp             TTSTTC
T ss_pred             ccccCC
Confidence            976543

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=94.81  E-value=0.045  Score=47.59  Aligned_cols=39  Identities=13%  Similarity=0.037  Sum_probs=35.7

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF   50 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~   50 (280)
                      ..+||+++++++.|+++|+.++|+|.++. ..++.+-+..
T Consensus       142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~-~~v~~~a~~~  180 (327)
T 4as2_A          142 PRVFSGQRELYNKLMENGIEVYVISAAHE-ELVRMVAADP  180 (327)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHTCG
T ss_pred             cccCHHHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhhc
Confidence            47899999999999999999999999999 8888887764

>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*

Probab=93.25  E-value=0.27  Score=40.84  Aligned_cols=152  Identities=9%  Similarity=0.013  Sum_probs=83.6

Q ss_pred             HHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHH----HHHHHHhCCCCccEEEEeCCccc
Q psy8911          18 PGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHF----ANLKKATGIEYKDMVFFDDEERN   93 (280)
Q Consensus        18 ~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~----~~~~~~~g~~p~~~l~v~D~~~~   93 (280)
                      .++++.+++++.++.++|.... .......-..|..+|+.      .+.....    ..+.+...-.+-++++|||.+..
T Consensus        64 ~~~~~~lr~~~~pvi~lt~~~~-~~~~~~a~~~Ga~dyl~------Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD~~~~  136 (259)
T 3luf_A           64 GEAVKVLLERGLPVVILTADIS-EDKREAWLEAGVLDYVM------KDSRHSLQYAVGLVHRLYLNQQIEVLVVDDSRTS  136 (259)
T ss_dssp             SHHHHHHHHTTCCEEEEECC-C-HHHHHHHHHTTCCEEEE------CSSHHHHHHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             HHHHHHHHhCCCCEEEEEccCC-HHHHHHHHHCCCcEEEe------CCchhHHHHHHHhhhhHhhcCCCcEEEEeCCHHH
Confidence            5789999999999999999877 33333334557666655      2222221    12222222356789999998764


Q ss_pred             ccc----cccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCC
Q psy8911          94 SHD----VSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRG  169 (280)
Q Consensus        94 i~a----a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  169 (280)
                      ...    -...|..+..+.++...-......   ..+.++..|+.                             ++- -.
T Consensus       137 ~~~l~~~L~~~~~~v~~a~~~~eal~~l~~~---~~~dlvllD~~-----------------------------mP~-~d  183 (259)
T 3luf_A          137 RHRTMAQLRKQLLQVHEASHAREALATLEQH---PAIRLVLVDYY-----------------------------MPE-ID  183 (259)
T ss_dssp             HHHHHHHHHTTTCEEEEESSHHHHHHHHHHC---TTEEEEEECSC-----------------------------CSS-SC
T ss_pred             HHHHHHHHHHcCcEEEEeCCHHHHHHHHhcC---CCCCEEEEcCC-----------------------------CCC-CC
Confidence            332    234677776665553322221111   11345556542                             111 12


Q ss_pred             HHHHHHHHhhC----CcEEEEEcCCCcHHHHHHHHhhCCCccccc
Q psy8911         170 VPEILRYLKEN----KCLVAAASRTSEILHAKQILNLINLNQYFS  210 (280)
Q Consensus       170 ~~~~L~~L~~~----g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~  210 (280)
                      -.++++.+++.    .+++.++|.......... .-..|..+|+.
T Consensus       184 G~~l~~~lr~~~~~~~~~ii~~s~~~~~~~~~~-a~~~Ga~~yl~  227 (259)
T 3luf_A          184 GISLVRMLRERYSKQQLAIIGISVSDKRGLSAR-YLKQGANDFLN  227 (259)
T ss_dssp             HHHHHHHHHHHCCTTTSEEEEEECSSSSSHHHH-HHHTTCSEEEE
T ss_pred             HHHHHHHHHhccCCCCCeEEEEEccCCHHHHHH-HHhcChhheEc
Confidence            35677777753    478888888733333333 34457777654

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=91.02  E-value=0.4  Score=39.80  Aligned_cols=48  Identities=15%  Similarity=0.161  Sum_probs=38.4

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeC----CcCCcccccccCceEEEECCCCCHHHHH
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVKKGMSHAVLQ  270 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD----~~~di~~a~~aG~~~i~v~~g~~~~~~~  270 (280)
                      .|...+..+   +|+++++++.|||    +.+|+..-+.+|...+.|.+  ..+.++
T Consensus       197 sKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~N--A~~~~k  248 (262)
T 2fue_A          197 DKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS--PQDTVQ  248 (262)
T ss_dssp             STTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS--HHHHHH
T ss_pred             CHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecC--CCHHHH
Confidence            566667666   8999999999999    99999999999987788843  344444

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=89.01  E-value=0.41  Score=38.21  Aligned_cols=102  Identities=11%  Similarity=0.106  Sum_probs=63.7

Q ss_pred             CHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcc
Q psy8911         169 GVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSH  248 (280)
Q Consensus       169 g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~  248 (280)
                      ++...|..+++.+-++++++-......+..+-+.++++  +....+.+....+....-+++-|++    ++|||... ..
T Consensus        82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~--i~~~~~~~~~e~~~~i~~l~~~G~~----vvVG~~~~-~~  154 (196)
T 2q5c_A           82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVK--IKEFLFSSEDEITTLISKVKTENIK----IVVSGKTV-TD  154 (196)
T ss_dssp             HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCE--EEEEEECSGGGHHHHHHHHHHTTCC----EEEECHHH-HH
T ss_pred             HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCc--eEEEEeCCHHHHHHHHHHHHHCCCe----EEECCHHH-HH
Confidence            35556667777778999999874444455555556654  1111121122333444444555664    58999887 58


Q ss_pred             cccccCceEEEECCCC--CHHHHHHHHHHHH
Q psy8911         249 DVSPLGVTCIHVKKGM--SHAVLQKGLKQWA  277 (280)
Q Consensus       249 ~a~~aG~~~i~v~~g~--~~~~~~~~~~~~~  277 (280)
                      .|+++|++++.+..|.  -...+++|+.-.+
T Consensus       155 ~A~~~Gl~~vli~sg~eSI~~Ai~eA~~l~~  185 (196)
T 2q5c_A          155 EAIKQGLYGETINSGEESLRRAIEEALNLIE  185 (196)
T ss_dssp             HHHHTTCEEEECCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCcEEEEecCHHHHHHHHHHHHHHHH
Confidence            9999999999998764  2555666655544

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=88.82  E-value=0.25  Score=42.87  Aligned_cols=38  Identities=18%  Similarity=0.114  Sum_probs=35.3

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      .+||++.++++.|+++|+++.|+|.+ ..+.++.+.+.+
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas-~~~~v~~~a~~~  180 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAA-HEELVRMVAADP  180 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHTCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHhhc
Confidence            68999999999999999999999999 899999888874

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=88.76  E-value=0.39  Score=38.34  Aligned_cols=89  Identities=10%  Similarity=0.052  Sum_probs=60.0

Q ss_pred             CHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccc
Q psy8911          16 DVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH   95 (280)
Q Consensus        16 g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~   95 (280)
                      ++...|..+++.+-++++++.......++.+-+.+++.=.+-  .+.+.++......-+++-|++    ++|||... .+
T Consensus        82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~--~~~~~~e~~~~i~~l~~~G~~----vvVG~~~~-~~  154 (196)
T 2q5c_A           82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEF--LFSSEDEITTLISKVKTENIK----IVVSGKTV-TD  154 (196)
T ss_dssp             HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEE--EECSGGGHHHHHHHHHHTTCC----EEEECHHH-HH
T ss_pred             HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEE--EeCCHHHHHHHHHHHHHCCCe----EEECCHHH-HH
Confidence            556666677777789999987766455666777777642111  233344554444555556654    48999766 68


Q ss_pred             ccccCCCeEEEEcCCC
Q psy8911          96 DVSPLGVTCILVEDGM  111 (280)
Q Consensus        96 aa~~~G~~~i~v~~~~  111 (280)
                      .|++.|++++++.++.
T Consensus       155 ~A~~~Gl~~vli~sg~  170 (196)
T 2q5c_A          155 EAIKQGLYGETINSGE  170 (196)
T ss_dssp             HHHHTTCEEEECCCCH
T ss_pred             HHHHcCCcEEEEecCH
Confidence            9999999999998764

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=86.84  E-value=0.23  Score=40.75  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=33.3

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeC----CcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD----~~~di~~a~~aG~~~i~v~~  262 (280)
                      .|...++.+   +|+++++++.|||    +.+|+..-+.+|...+.|.+
T Consensus       188 ~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N  233 (246)
T 2amy_A          188 DKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  233 (246)
T ss_dssp             SGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             chHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence            555556666   8999999999999    99999999999987777754

>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A

Probab=85.00  E-value=0.66  Score=39.16  Aligned_cols=219  Identities=10%  Similarity=-0.041  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHCCceEEEecCC-----CchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHhCCC------CccE
Q psy8911          17 VPGILKYLKQNNCLVAAASRT-----SEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKATGIE------YKDM   84 (280)
Q Consensus        17 ~~~~l~~L~~~g~~~~i~Sn~-----~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~g~~------p~~~   84 (280)
                      ..++.+.|++.|..+..+---     .. ...+..++.+  .+-||. .|+.| .-+..|...+...|.+      .-.+
T Consensus        44 ~~~l~~~L~~~G~~v~~~P~i~i~~~~~-~~l~~~l~~l--~~~~d~-lifTS~naV~~~~~~l~~~~~~~~~~l~~~~i  119 (286)
T 3d8t_A           44 KEEFKALAEKLGFTPLLFPVQATEKVPV-PEYRDQVREL--AQGVDL-FLATTGVGVRDLLEAGKALGLDLEGPLAKAFR  119 (286)
T ss_dssp             HHHHHHHHHHHTCEEEECCCEEEEEEEC-TTHHHHHHHH--TTCCSE-EEECCHHHHHHHHHHHHHTTCCCHHHHHHSEE
T ss_pred             hHHHHHHHHHCCCeEEEeeeEEEecCCH-HHHHHHHHhh--ccCCCE-EEEECHHHHHHHHHHHHHcCchHHHHhcCCeE
Confidence            677888888888765432100     11 1233444432  234662 23333 3455577777777765      2357


Q ss_pred             EEEeCCcccccccccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCeeEccCCcee
Q psy8911          85 VFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLI  164 (280)
Q Consensus        85 l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~  164 (280)
                      ..||.....  +.++.|+....++ ..+.+.+......            |.-                 .+.-     .
T Consensus       120 ~aVG~~Ta~--aL~~~G~~~~~~p-~~~~e~L~~~l~~------------g~~-----------------~vLi-----~  162 (286)
T 3d8t_A          120 LARGAKAAR--ALKEAGLPPHAVG-DGTSKSLLPLLPQ------------GRG-----------------VAAL-----Q  162 (286)
T ss_dssp             EESSHHHHH--HHHHTTCCCSEEC-SSSGGGGGGGCCC------------CCS-----------------EEEE-----E
T ss_pred             EEECHHHHH--HHHHcCCCccccc-cccHHHHHHHHHc------------CCc-----------------eEEE-----E
Confidence            777775543  5567888877776 4444444332111            100                 0000     0


Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCC---CcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcC-----CC-CC
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRT---SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATG-----IE-YK  235 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~-----~~-~~  235 (280)
                      +.-.+...+.+.|+++|..+..+.--   ..........+.+. ..-+|.+...+..-...|...+...+     +. .-
T Consensus       163 r~~~~~~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~-~~~~d~v~FtS~~~v~~~~~~~~~~~~~~~~l~~~~  241 (286)
T 3d8t_A          163 LYGKPLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEAVL-RGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRV  241 (286)
T ss_dssp             CSSSCCHHHHHHHHHTTCEEEEECSEEEEECHHHHHHHHHHHH-TTCCSEEEESSHHHHHHHHHHCSCHHHHHHHHTTTS
T ss_pred             ccCcccHHHHHHHHHCCCEEEEEEEEEEecCcccHHHHHHHHH-cCCCCEEEEECHHHHHHHHHHHHhccchhhHhhcCC
Confidence            11123344556677777555433321   01111111111111 01233322222222233333221100     12 33


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCCHHHHHHHHHHHHhc
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWASK  279 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~  279 (280)
                      .++.||.....  +++++|+..+.++...+.+.+-+++..+-++
T Consensus       242 ~i~aIG~~TA~--al~~~G~~~~~~a~~~~~~~L~~~l~~~~~~  283 (286)
T 3d8t_A          242 KALAVGRVTAD--ALREWGVKPFYVDETERLGSLLQGFKRALQK  283 (286)
T ss_dssp             EEEEESHHHHH--HHHHTTCCCSEEECSSCHHHHHHHHHHHHHH
T ss_pred             EEEEECHHHHH--HHHHcCCCceEEeCCCCHHHHHHHHHHHHhh
Confidence            58889988875  7788999888887777888888877766543

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=84.40  E-value=0.59  Score=34.24  Aligned_cols=28  Identities=14%  Similarity=-0.025  Sum_probs=25.9

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSE   39 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~   39 (280)
                      .+.|++.+.|+.|+++|++++++|+.+.
T Consensus        24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~   51 (126)
T 1xpj_A           24 LPRLDVIEQLREYHQLGFEIVISTARNM   51 (126)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence            5678899999999999999999999887

>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}

Probab=84.28  E-value=2.7  Score=34.58  Aligned_cols=98  Identities=6%  Similarity=-0.033  Sum_probs=57.0

Q ss_pred             cCCHHHHHHHHHHCCceEEEec------CCCchHHHHHHHhhcCccccccccceecC-CChhHHHHHHHHhCCCC--ccE
Q psy8911          14 YPDVPGILKYLKQNNCLVAAAS------RTSEIQGAQQLLDLFNWNQYFDHKQIFPG-QKTTHFANLKKATGIEY--KDM   84 (280)
Q Consensus        14 ~~g~~~~l~~L~~~g~~~~i~S------n~~~~~~~~~~l~~~~l~~~fd~~~i~~~-~~~~~~~~~~~~~g~~p--~~~   84 (280)
                      -+...++.+.|+++|+.+..+-      .... ...+..+..+   +-||. .++.| .-+..|...++..+.+.  -.+
T Consensus        15 ~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~-~~l~~~l~~l---~~~d~-vifTS~~aV~~~~~~l~~~~~~~~~~~i   89 (254)
T 4es6_A           15 DEECAALAASLGEAGVHSSSLPLLAIDPLEET-PEQRTLMLDL---DRYCA-VVVVSKPAARLGLERLDRYWPQPPQQTW   89 (254)
T ss_dssp             HHHHHHHHHHHHHTTCEEEECCSCEEEECCCC-HHHHHHHHTG---GGCSE-EEECSHHHHHHHHHHHHHHCSSCCSCEE
T ss_pred             hHHhHHHHHHHHHCCCcEEEeCCEEEeeCcCh-HHHHHHHHhc---cCCCE-EEEECHHHHHHHHHHHHHhCCCcccCEE
Confidence            3467889999999998765542      1111 2233444433   44673 33333 34555777777766543  456


Q ss_pred             EEEeCCcccccccccCCCeEEEEcCCCchhhhhc
Q psy8911          85 VFFDDEERNSHDVSPLGVTCILVEDGMTNAITLY  118 (280)
Q Consensus        85 l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~  118 (280)
                      ..||....  ++.++.|+.+.+++...+.+.+..
T Consensus        90 ~aVG~~Ta--~~L~~~G~~~~~~~~~~~~e~L~~  121 (254)
T 4es6_A           90 CSVGAATA--AILEAYGLDVTYPEQGDDSEALLA  121 (254)
T ss_dssp             EESSHHHH--HHHHHHTCCEECCSSCCSHHHHHT
T ss_pred             EEECHHHH--HHHHHcCCCcccCCCCCCHHHHHH
Confidence            66776544  345567988887766555555443

>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1

Probab=80.69  E-value=1.7  Score=35.44  Aligned_cols=86  Identities=14%  Similarity=0.088  Sum_probs=53.3

Q ss_pred             HHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccc
Q psy8911         170 VPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHD  249 (280)
Q Consensus       170 ~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~  249 (280)
                      +...|..+++.+-++++++-......+..+-+.++++  +....+.+....+....-+++-|++    ++|||... ...
T Consensus        95 il~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~--i~~~~~~~~ee~~~~i~~l~~~G~~----vVVG~~~~-~~~  167 (225)
T 2pju_A           95 VLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLR--LDQRSYITEEDARGQINELKANGTE----AVVGAGLI-TDL  167 (225)
T ss_dssp             HHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCC--EEEEEESSHHHHHHHHHHHHHTTCC----EEEESHHH-HHH
T ss_pred             HHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCc--eEEEEeCCHHHHHHHHHHHHHCCCC----EEECCHHH-HHH
Confidence            4445556666677899999885555566666666665  1111111111223333334445654    58999887 589


Q ss_pred             ccccCceEEEECC
Q psy8911         250 VSPLGVTCIHVKK  262 (280)
Q Consensus       250 a~~aG~~~i~v~~  262 (280)
                      |+++|++++.+..
T Consensus       168 A~~~Gl~~vlI~s  180 (225)
T 2pju_A          168 AEEAGMTGIFIYS  180 (225)
T ss_dssp             HHHTTSEEEESSC
T ss_pred             HHHcCCcEEEECC
Confidence            9999999999983

>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1

Probab=80.36  E-value=0.93  Score=37.01  Aligned_cols=87  Identities=17%  Similarity=0.178  Sum_probs=54.1

Q ss_pred             CHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccc
Q psy8911          16 DVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH   95 (280)
Q Consensus        16 g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~   95 (280)
                      ++...|..+++.+-++++++-......++.+-+.+++.  +....+.+.++......-+++-|++    ++|||... .+
T Consensus        94 Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~--i~~~~~~~~ee~~~~i~~l~~~G~~----vVVG~~~~-~~  166 (225)
T 2pju_A           94 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLR--LDQRSYITEEDARGQINELKANGTE----AVVGAGLI-TD  166 (225)
T ss_dssp             HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCC--EEEEEESSHHHHHHHHHHHHHTTCC----EEEESHHH-HH
T ss_pred             HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCc--eEEEEeCCHHHHHHHHHHHHHCCCC----EEECCHHH-HH
Confidence            34445555555567899998776645566666667753  2200222223333344444555654    48999766 68


Q ss_pred             ccccCCCeEEEEcC
Q psy8911          96 DVSPLGVTCILVED  109 (280)
Q Consensus        96 aa~~~G~~~i~v~~  109 (280)
                      .|++.|++++++.+
T Consensus       167 ~A~~~Gl~~vlI~s  180 (225)
T 2pju_A          167 LAEEAGMTGIFIYS  180 (225)
T ss_dssp             HHHHTTSEEEESSC
T ss_pred             HHHHcCCcEEEECC
Confidence            99999999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	280
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	4e-20
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	9e-14
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	0.003

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 83.0 bits (204), Expect = 4e-20
 Identities = 76/149 (51%), Positives = 92/149 (61%), Gaps = 2/149 (1%)

Query: 133 LDYTLWPLHV-HDLVAPFKKIGQ-KVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT 190
           LDYTLWP  V   +  PF K     V D +G  I+ Y  VPE+L  L+     VAAASRT
Sbjct: 12  LDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRT 71

Query: 191 SEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDV 250
           SEI  A Q+L L +L +YF  +EIYPG K THFE L   TG+ +  MVFFDDE RN  DV
Sbjct: 72  SEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDV 131

Query: 251 SPLGVTCIHVKKGMSHAVLQKGLKQWASK 279
             LGVTCIH++ GMS   L +GL+ +A  
Sbjct: 132 GRLGVTCIHIRDGMSLQTLTQGLETFAKA 160

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.6 bits (159), Expect = 9e-14
 Identities = 61/112 (54%), Positives = 76/112 (67%)

Query: 1   DKVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQ 60
             V D RG +I+ YP+VP +L  L+     VAAASRTSEIQGA QLL+LF+  +YF  ++
Sbjct: 35  GTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQRE 94

Query: 61  IFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT 112
           I+PG K THF  L   TG+ +  MVFFDDE RN  DV  LGVTCI + DGM+
Sbjct: 95  IYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMS 146

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (81), Expect = 0.003
 Identities = 16/108 (14%), Positives = 30/108 (27%), Gaps = 8/108 (7%)

Query: 164 IKYYRGVPEILRYLKENKCLVAAAS---RTSEILHAKQILNLINLNQYFSNK-----EIY 215
               R + +    LK+        +                +  L+Q+F           
Sbjct: 96  RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGM 155

Query: 216 PGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG 263
             P+   +  L      +  ++VF DD   N      +G+  I V   
Sbjct: 156 IKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNT 203

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	280
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	100.0
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.87
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.87
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.87
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.86
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.85
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.84
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.83
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.82
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.82
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.82
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.82
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.81
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.81
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.79
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.79
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.77
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.77
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.76
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.76
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.75
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.74
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.74
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.74
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.72
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.72
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.71
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.7
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.69
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.69
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.68
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.68
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.68
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.66
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.66
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.65
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.64
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.61
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.61
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.6
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.6
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.59
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.58
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.57
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.57
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.57
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.53
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.52
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.52
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.51
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.51
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.5
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.45
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.39
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.35
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.25
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.2
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.11
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.08
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	99.07
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.06
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.02
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	99.01
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.96
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	98.96
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	98.93
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.93
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	98.92
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	98.82
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	98.75
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.73
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.73
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.71
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	98.69
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.58
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	98.55
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	98.54
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	98.53
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.52
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	98.39
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.25
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	98.25
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	98.17
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.17
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.11
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	97.99
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.96
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	97.95
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	97.95
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.93
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	97.92
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	97.8
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.64
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.62
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.51
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	97.51
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	97.49
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.42
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	97.36
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.33
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	97.22
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	97.17
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	97.09
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	96.85
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	96.81
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	96.19
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	94.65
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	94.31
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	94.15
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	93.3
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	93.29
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	93.01
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	92.59
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	92.16
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	91.47
d1i3ca_	144	Response regulator for cyanobacterial phytochrome	91.42
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	89.01
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	85.98
d2pjua1	186	Propionate catabolism operon regulatory protein Pr	83.95
d1k66a_	149	Response regulator for cyanobacterial phytochrome	83.7
d2pjua1	186	Propionate catabolism operon regulatory protein Pr	81.87
d1zgza1	120	TorCAD operon transcriptional regulator TorD, N-te	80.54

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-33  Score=224.27  Aligned_cols=156  Identities=49%  Similarity=0.807  Sum_probs=142.7

Q ss_pred             cceeEEEecCCCCCCccccccc-CcccccC-CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLV-APFKKIG-QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      .||+++||+||||||.+.+.+. +++.... ..+.+.+...+++|||+.++|+.|+++|++++|+||++.....+..+++
T Consensus         4 ~pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~   83 (164)
T d1u7pa_           4 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLEL   83 (164)
T ss_dssp             CCSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHH
T ss_pred             CCCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhc
Confidence            5799999999999999988887 7776555 6677888889999999999999999999999999987456677888999


Q ss_pred             CCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCHHHHHHHHHHHHhcC
Q psy8911         203 INLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSHAVLQKGLKQWASKN  280 (280)
Q Consensus       203 ~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~  280 (280)
                      +++.++|..+.....|++++|..+++++|++|++|+||||+.+|+++|+++||.+|+|++|+++.+++++++.|++++
T Consensus        84 ~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~~~~~~~~~l~~f~~~~  161 (164)
T d1u7pa_          84 FDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAKAQ  161 (164)
T ss_dssp             TTCGGGCSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCCCHHHHHHHHHHHHHHT
T ss_pred             ccccccceeeecccCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhh
Confidence            999999998777777999999999999999999999999999999999999999999999999999999999999764

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=5.3e-23  Score=168.87  Aligned_cols=102  Identities=18%  Similarity=0.192  Sum_probs=92.9

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++|+||+ .+..++..++++|+.+||+.+.+++     +|+++.|..+++++|++|++|
T Consensus        86 ~~~~~pg~~~~l~~L~~~g~~~~i~T~~-~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  164 (218)
T d1te2a_          86 TRPLLPGVREAVALCKEQGLLVGLASAS-PLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTC  164 (218)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGE
T ss_pred             cccccchHHHHHHHhhhccccccccccc-cccccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCchhc
Confidence            3468999999999999999999999999 8999999999999999999865543     366788999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      +||||++.|+.+|+++|+++|+|+++..
T Consensus       165 l~igD~~~di~aA~~~G~~~i~v~~~~~  192 (218)
T d1te2a_         165 VALEDSVNGMIASKAARMRSIVVPAPEA  192 (218)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEECCCTTT
T ss_pred             EEEeeCHHHHHHHHHcCCEEEEECCCCC
Confidence            9999999999999999999999987654

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.87  E-value=1.9e-23  Score=170.55  Aligned_cols=105  Identities=10%  Similarity=0.095  Sum_probs=93.8

Q ss_pred             CCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCC
Q psy8911         160 KGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEY  234 (280)
Q Consensus       160 ~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~  234 (280)
                      +..+++++||+.++|+.|++ +++++|+||+ ....++..++++|+.++|+.+....     +|++..|..+++++|++|
T Consensus        77 ~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~  154 (207)
T d2hdoa1          77 HYDQIELYPGITSLFEQLPS-ELRLGIVTSQ-RRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP  154 (207)
T ss_dssp             CGGGCEECTTHHHHHHHSCT-TSEEEEECSS-CHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred             cccccccccchhhhhhhhcc-cccccccccc-cccccccccccccccccccccccccccccchhhhhhhcccccceeeec
Confidence            34567899999999999986 6999999999 8999999999999999999754332     477899999999999999


Q ss_pred             CcEEEEeCCcCCcccccccCceEEEECCCCCH
Q psy8911         235 KDMVFFDDEERNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       235 ~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      ++|+||||+.+|+++|+++||.+++|.+|...
T Consensus       155 ~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~  186 (207)
T d2hdoa1         155 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDP  186 (207)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCT
T ss_pred             cceeEecCCHHHHHHHHHcCCeEEEEecCCCC
Confidence            99999999999999999999999999987653

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.87  E-value=1.8e-23  Score=170.26  Aligned_cols=102  Identities=14%  Similarity=0.173  Sum_probs=90.5

Q ss_pred             CceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911         161 GTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       161 ~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~  235 (280)
                      ...+.++||+.++|+.|+++|++++|+||+ .. .+...++++|+.+||+.+.++     .+|+++.|+.+++++|++|+
T Consensus        78 ~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~-~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~  155 (204)
T d2go7a1          78 NAQVVLMPGAREVLAWADESGIQQFIYTHK-GN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSD  155 (204)
T ss_dssp             GGGCEECTTHHHHHHHHHHTTCEEEEECSS-CT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG
T ss_pred             cccCcccchHHhhhhcccccccchhhhccc-ch-hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCc
Confidence            446789999999999999999999999998 55 456689999999999976432     24788999999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      +|+||||+.+|+++|+++||++|+|.++.
T Consensus       156 ~~l~VgD~~~Di~~A~~~G~~~i~v~~~~  184 (204)
T d2go7a1         156 NTYYIGDRTLDVEFAQNSGIQSINFLEST  184 (204)
T ss_dssp             GEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred             eEEEEeCCHHHHHHHHHcCCeEEEEcCCC
Confidence            99999999999999999999999998763

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.86  E-value=1.5e-22  Score=166.32  Aligned_cols=103  Identities=20%  Similarity=0.322  Sum_probs=94.2

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++||+.++|+.|+++|++++|+||+ ....++..++++||.++|+.+....     +|+|+.|..++++++++|++
T Consensus        92 ~~~~l~~~~~~~L~~L~~~g~~~~i~tn~-~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~  170 (224)
T d2hsza1          92 NISRLYPNVKETLEALKAQGYILAVVTNK-PTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQ  170 (224)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred             cccchHHHHHHHHHHHhccCCcccccccc-cHHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhhc
Confidence            45679999999999999999999999999 8899999999999999999754322     37889999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |+||||+..|+.+|+++|+.+|+|.+|+.
T Consensus       171 ~~~igD~~~Di~~A~~aG~~~i~v~~g~~  199 (224)
T d2hsza1         171 ILFVGDSQNDIFAAHSAGCAVVGLTYGYN  199 (224)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEEESSSCS
T ss_pred             cchhcCcHHHHHHHHHcCCeEEEEeCCCC
Confidence            99999999999999999999999998764

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=1.1e-21  Score=154.62  Aligned_cols=121  Identities=50%  Similarity=0.744  Sum_probs=105.3

Q ss_pred             cccccCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC--ChhHHHHHHHHhCC
Q psy8911           2 KVVDARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ--KTTHFANLKKATGI   79 (280)
Q Consensus         2 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~--~~~~~~~~~~~~g~   79 (280)
                      .+.+++...+++|||+.++|+.|+++|++++|+||++.+...+..++.+++..+|+  .+....  +...|..+++++|+
T Consensus        36 ~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--~~~~~~kp~~~~~~~~~~~~~~  113 (164)
T d1u7pa_          36 TVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--QREIYPGSKVTHFERLHHKTGV  113 (164)
T ss_dssp             CEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--EEEESSSCHHHHHHHHHHHHCC
T ss_pred             hHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--eeecccCCChHHHHHHHHHhCC
Confidence            35667888899999999999999999999999999887466778899999999999  555544  44459999999999


Q ss_pred             CCccEEEEeCCcccccccccCCCeEEEEcCCCchhhhhccccccc
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAITLYGRSVFI  124 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~~~~~~~~~~  124 (280)
                      +|++|+||||+..|+++|+++|+.+|+|++|.+.+++.++...|.
T Consensus       114 ~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~~~~~~~~~l~~f~  158 (164)
T d1u7pa_         114 PFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFA  158 (164)
T ss_dssp             CGGGEEEEESCHHHHHHHHTTTCEEEECSSCCCHHHHHHHHHHHH
T ss_pred             ChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence            999999999999999999999999999999988888777666553

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.84  E-value=8.2e-22  Score=165.90  Aligned_cols=101  Identities=14%  Similarity=0.080  Sum_probs=90.3

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccc-ccceEec-----CCCHHHHHHHHHHcCCC-CC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYF-SNKEIYP-----GPKTTHFESLKKATGIE-YK  235 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f-~~~~~~~-----~~k~~~~~~~~~~~~~~-~~  235 (280)
                      ...++||+.++|+.|+++|++++|+||+ ....++..++.+|+.+|| +.+.++.     +|.|..|..+++++|+. ++
T Consensus        97 ~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~-~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~  175 (257)
T d1swva_          97 YASPINGVKEVIASLRERGIKIGSTTGY-TREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMN  175 (257)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSS-CHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGG
T ss_pred             cCccCCcHHHHHHHHHhcccceeecCCC-chhhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcc
Confidence            4579999999999999999999999999 899999999999999987 5543322     36778999999999995 59


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      +|+||||+..|+.+|+++||.+|+|.+|.
T Consensus       176 ~~v~VgDs~~Di~aA~~aG~~ti~v~~G~  204 (257)
T d1swva_         176 HMIKVGDTVSDMKEGRNAGMWTVGVILGS  204 (257)
T ss_dssp             GEEEEESSHHHHHHHHHTTSEEEEECTTC
T ss_pred             eEEEEeCChhhHHHHHHCCCEEEEEccCC
Confidence            99999999999999999999999999875

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.83  E-value=9.9e-22  Score=160.24  Aligned_cols=102  Identities=8%  Similarity=0.153  Sum_probs=92.4

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec---CCCHHHHHHHHHHcCCCCCcEE
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP---GPKTTHFESLKKATGIEYKDMV  238 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~---~~k~~~~~~~~~~~~~~~~~~l  238 (280)
                      ....++||+.++|+.|+.+ ++++|+||+ ....++..++++|+..||+.+....   .|+|+++..+++++|++|++++
T Consensus        81 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~-~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v  158 (210)
T d2ah5a1          81 YEAQLFPQIIDLLEELSSS-YPLYITTTK-DTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAI  158 (210)
T ss_dssp             GSCEECTTHHHHHHHHHTT-SCEEEEEEE-EHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEE
T ss_pred             hcccchhHHHHHHhhhhcc-cchhhcccc-cchhhhHHHHhhcccccccccccccccccccccccchhhhhhhcccccce
Confidence            4567899999999999977 589999999 9999999999999999999764433   3778899999999999999999


Q ss_pred             EEeCCcCCcccccccCceEEEECCCCC
Q psy8911         239 FFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       239 ~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      ||||+.+|+.+|+++|+++++|.+|+.
T Consensus       159 ~VGDs~~Di~aa~~aGi~~i~v~~g~~  185 (210)
T d2ah5a1         159 IIGDTKFDMLGARETGIQKLAITWGFG  185 (210)
T ss_dssp             EEESSHHHHHHHHHHTCEEEEESSSSS
T ss_pred             eecCCHHHHHHHHHcCCeEEEEcCCCC
Confidence            999999999999999999999998874

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.82  E-value=2.2e-21  Score=160.32  Aligned_cols=107  Identities=18%  Similarity=0.193  Sum_probs=89.9

Q ss_pred             ceeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHc---CC
Q psy8911         162 TLIKYYRGVPEILRYLKENK-CLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKAT---GI  232 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~---~~  232 (280)
                      ....++||+.++|+.|+++| ++++|+||+ ....+...++.+||.+||+.+...+     +|+|+.+...++++   ++
T Consensus        88 ~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~-~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~  166 (228)
T d2hcfa1          88 EDITLLEGVRELLDALSSRSDVLLGLLTGN-FEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANY  166 (228)
T ss_dssp             GGEEECTTHHHHHHHHHTCTTEEEEEECSS-CHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred             cCceecCchHHHHhhhhccccccccccCCC-cchhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccCC
Confidence            45689999999999999987 899999999 8899999999999999999765433     24445565555554   89


Q ss_pred             CCCcEEEEeCCcCCcccccccCceEEEECCCC-CHHHH
Q psy8911         233 EYKDMVFFDDEERNSHDVSPLGVTCIHVKKGM-SHAVL  269 (280)
Q Consensus       233 ~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~-~~~~~  269 (280)
                      +|++|+||||+++|+.+|+++||++|+|.+|. +.+++
T Consensus       167 ~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l  204 (228)
T d2hcfa1         167 SPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEEL  204 (228)
T ss_dssp             CGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHH
T ss_pred             ChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHH
Confidence            99999999999999999999999999999876 44444

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.82  E-value=2.2e-21  Score=159.43  Aligned_cols=98  Identities=22%  Similarity=0.316  Sum_probs=87.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+++|++++++||+ ..  ....++.+|+.++|+.+.+.     .+|+++.|+.+++++|++|++|
T Consensus        89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~-~~--~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~  165 (221)
T d1o08a_          89 PADVYPGILQLLKDLRSNKIKIALASAS-KN--GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSES  165 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTTCEEEECCSC-TT--HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGE
T ss_pred             cccccCCceeccccccccccceEEEeec-ch--hhHHHHhhccccccccccccccccccccChHHHHHHHHHcCCCCceE
Confidence            4679999999999999999999999998 54  46789999999999975433     2477899999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECCC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      |||||+..|+++|+++||++|+|.++
T Consensus       166 l~VgD~~~di~~A~~aG~~~i~v~~~  191 (221)
T d1o08a_         166 IGLEDSQAGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             EEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred             EEEecCHHHHHHHHHcCCEEEEECCh
Confidence            99999999999999999999999764

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=3.9e-21  Score=150.91  Aligned_cols=133  Identities=12%  Similarity=0.099  Sum_probs=95.5

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc--------------
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE--------------  192 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~--------------  192 (280)
                      |.+.||.||||+......+           .-....++.++||+.++|+.|+++|++++|+||. +              
T Consensus         3 K~i~~D~DGtL~~~~~~~~-----------~~~~~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq-~~ia~~~~~~~~~~~   70 (161)
T d2fpwa1           3 KYLFIDRDGTLISEPPSDF-----------QVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQ-DGLGTQSFPQADFDG   70 (161)
T ss_dssp             EEEEECCBTTTBCCC--CC-----------CCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEEC-TTTTSTTSCHHHHHH
T ss_pred             cEEEEeCCCCeEeeCCCCC-----------ccCCHHHceECccHHHHHHHHHHcCCceeeeccc-ccchhHHHHHHHhhh
Confidence            6889999999986322211           0112245789999999999999999999999997 3              


Q ss_pred             -HHHHHHHHhhCCCcc---ccccceE-----ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC-
Q psy8911         193 -ILHAKQILNLINLNQ---YFSNKEI-----YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK-  262 (280)
Q Consensus       193 -~~~~~~~l~~~gl~~---~f~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~-  262 (280)
                       .......++..|+..   ||.....     ..+|.|.++..+++++|++|++|+||||+..|+++|++|||+++++.. 
T Consensus        71 ~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~  150 (161)
T d2fpwa1          71 PHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE  150 (161)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             hhhhhhhhccccccccceeeeccccccccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence             123345566666642   3432111     125788999999999999999999999999999999999999999975 


Q ss_pred             CCCHHHHHH
Q psy8911         263 GMSHAVLQK  271 (280)
Q Consensus       263 g~~~~~~~~  271 (280)
                      ..+|+...+
T Consensus       151 ~~~~~~i~~  159 (161)
T d2fpwa1         151 TLNWPMIGE  159 (161)
T ss_dssp             TBCHHHHHH
T ss_pred             CCCHHHHHh
Confidence            446776543

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.82  E-value=2.4e-21  Score=155.71  Aligned_cols=100  Identities=13%  Similarity=0.139  Sum_probs=85.9

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++||+.++|+.|+++|++++|+||+ ..... ..++++++.++|+.+.++.     +|+|+.|..+++++++  ++
T Consensus        76 ~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~-~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~  151 (187)
T d2fi1a1          76 EHPILFEGVSDLLEDISNQGGRHFLVSHR-NDQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SS  151 (187)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEECSS-CTHHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SS
T ss_pred             hcCcccchhHHHHHHHHhhhccccccccC-ccchh-hhhhhhccccccccccccccccccCCCHHHHHHHHHHcCC--CC
Confidence            45689999999999999999999999998 66555 4799999999999764432     3667899999999886  46


Q ss_pred             EEEEeCCcCCcccccccCceEEEECCCCC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~~g~~  265 (280)
                      |+||||+..|+++|+++|+++++|+.+..
T Consensus       152 ~l~vgDs~~Di~aA~~aG~~~i~v~~~~~  180 (187)
T d2fi1a1         152 GLVIGDRPIDIEAGQAAGLDTHLFTSIVN  180 (187)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEECSCHHH
T ss_pred             eEEEeCCHHHHHHHHHcCCEEEEECCCCC
Confidence            99999999999999999999999986543

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.81  E-value=5.1e-21  Score=156.85  Aligned_cols=99  Identities=16%  Similarity=0.239  Sum_probs=90.9

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ....++|++.++|+.|+++|++++++||+ .....+..++.+++..+|+.+..+.     +|.++.|..+++++|++|++
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~-~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e  168 (220)
T d1zrna_          90 LRLAPFSEVPDSLRELKRRGLKLAILSNG-SPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA  168 (220)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred             ccccccchhHHHHHHHHhcCCeEEeecch-HHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCce
Confidence            34678999999999999999999999999 8899999999999999999865543     36678999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEEC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      |+||||++.|+++|+++||++|+|.
T Consensus       169 ~l~VgD~~~Di~~A~~aG~~~v~v~  193 (220)
T d1zrna_         169 ILFVASNAWDATGARYFGFPTCWIN  193 (220)
T ss_dssp             EEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred             EEEEecChHhHHHHHHcCCEEEEEc
Confidence            9999999999999999999999996

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.81  E-value=1.1e-20  Score=156.27  Aligned_cols=100  Identities=21%  Similarity=0.314  Sum_probs=89.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++||+.++|+.|+ +|++++|+||+ ....++..++++|+.++|+.+.++.     +|+++.|..+++++|++|++|
T Consensus        98 ~~~~~p~~~~~L~~l~-~~~~i~i~Sn~-~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~  175 (230)
T d1x42a1          98 YGELYPEVVEVLKSLK-GKYHVGMITDS-DTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA  175 (230)
T ss_dssp             HCCBCTTHHHHHHHHB-TTBEEEEEESS-CHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred             hCcccccHHHHHHHhh-ccCceeeeecc-ccccchhhhcccccccccccccccccccccchhhHHHHHHHhhhccccccc
Confidence            3578999999999997 47999999999 8899999999999999999865432     477899999999999999999


Q ss_pred             EEEeCCc-CCcccccccCceEEEECCCC
Q psy8911         238 VFFDDEE-RNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       238 l~igD~~-~di~~a~~aG~~~i~v~~g~  264 (280)
                      +||||+. +|+++|+++|+.++++..+.
T Consensus       176 l~vgD~~~~Di~~A~~~G~~~v~v~~~~  203 (230)
T d1x42a1         176 VYVGDNPVKDCGGSKNLGMTSILLDRKG  203 (230)
T ss_dssp             EEEESCTTTTHHHHHTTTCEEEEECTTS
T ss_pred             ceeecCcHhHHHHHHHcCCEEEEECCCC
Confidence            9999985 69999999999999997543

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=1.7e-20  Score=153.72  Aligned_cols=108  Identities=18%  Similarity=0.117  Sum_probs=90.9

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCC---cHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCC
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTS---EILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~---~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~  235 (280)
                      ..++|++.++|..|+++|++++++||+.   ........+.+.++.+||+.+..+.     +|+++.|..++++++++|+
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~  175 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPN  175 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTT
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcc
Confidence            5789999999999999999999999851   2234566678889999999865432     4888999999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCC-HHHHHH
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMS-HAVLQK  271 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~-~~~~~~  271 (280)
                      +|+||||+..|+.+|+++||++|+|.++.. ..++++
T Consensus       176 ~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~~  212 (222)
T d1cr6a1         176 EVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEK  212 (222)
T ss_dssp             SEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHHH
T ss_pred             eEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHHH
Confidence            999999999999999999999999987654 444443

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=9.7e-20  Score=149.07  Aligned_cols=103  Identities=17%  Similarity=0.212  Sum_probs=92.1

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~g~~p~   82 (280)
                      ..+++||+.++|+.|+++|++++|+||++. ..++..++.+|+.+||+  .+++++++       ..|+.+++++|++|+
T Consensus        86 ~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~-~~~~~~l~~~~l~~~F~--~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~  162 (218)
T d1te2a_          86 TRPLLPGVREAVALCKEQGLLVGLASASPL-HMLEKVLTMFDLRDSFD--ALASAEKLPYSKPHPQVYLDCAAKLGVDPL  162 (218)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCS--EEEECTTSSCCTTSTHHHHHHHHHHTSCGG
T ss_pred             cccccchHHHHHHHhhhccccccccccccc-ccccccccccccccccc--ccccccccccchhhHHHHHHHHHHcCCCch
Confidence            456899999999999999999999999999 89999999999999999  77776432       349999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCCCchhh
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDGMTNAI  115 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~  115 (280)
                      +|+||||+..|+.+|+++|+++|+|+++.....
T Consensus       163 ~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~  195 (218)
T d1te2a_         163 TCVALEDSVNGMIASKAARMRSIVVPAPEAQND  195 (218)
T ss_dssp             GEEEEESSHHHHHHHHHTTCEEEECCCTTTTTC
T ss_pred             hcEEEeeCHHHHHHHHHcCCEEEEECCCCCccc
Confidence            999999999999999999999999977654433

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.77  E-value=8.3e-20  Score=151.80  Aligned_cols=97  Identities=12%  Similarity=0.161  Sum_probs=87.3

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      ...++|++.++|++|+  +++++++||+ ....+...++++++.++|+.+.+++     +|.|++|..+++++|++|++|
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~-~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~  167 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNG-APDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEV  167 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESS-CHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred             ccccchhhhHHHHHHh--hhceeEEecc-chHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhE
Confidence            4578999999999885  6789999999 8888899999999999999865543     477789999999999999999


Q ss_pred             EEEeCCcCCcccccccCceEEEECC
Q psy8911         238 VFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       238 l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      +||||+..||.+|+++||++|+|..
T Consensus       168 l~VgD~~~di~~A~~aG~~tv~v~r  192 (245)
T d1qq5a_         168 LFVSSNGFDVGGAKNFGFSVARVAR  192 (245)
T ss_dssp             EEEESCHHHHHHHHHHTCEEEEECC
T ss_pred             EEEeCCHHHHHHHHHcCCeEEEEcC
Confidence            9999999999999999999999964

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.77  E-value=7.7e-20  Score=149.47  Aligned_cols=123  Identities=9%  Similarity=-0.014  Sum_probs=91.3

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc--------------
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE--------------  192 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~--------------  192 (280)
                      +++.||.||||.....  +            -....++++|||+.++|+.|+++|++++|+||. +              
T Consensus        24 ~Aif~DrDGtl~~~~~--y------------~~~~~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ-~gi~~g~~~~~~~~~   88 (209)
T d2o2xa1          24 PALFLDRDGTINVDTD--Y------------PSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQ-SGIARGYFGWSAFAA   88 (209)
T ss_dssp             CCEEECSBTTTBCCCS--C------------TTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEEC-HHHHTTSCCHHHHHH
T ss_pred             CEEEEeCCCCeECCCC--C------------CCCHHHeEecccHHHHHHHHHhhCCeEEEeccc-ccchhhhhhhhhhhh
Confidence            5788999999974211  0            012235789999999999999999999999995 3              


Q ss_pred             -HHHHHHHHhhCCC--ccccccce-------------EecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         193 -ILHAKQILNLINL--NQYFSNKE-------------IYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       193 -~~~~~~~l~~~gl--~~~f~~~~-------------~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                       .......++..|+  ..+|....             ...+|++.++.+++++++++|++|+||||+..|+++|++|||.
T Consensus        89 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~  168 (209)
T d2o2xa1          89 VNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLA  168 (209)
T ss_dssp             HHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCS
T ss_pred             hhhHHHHHhhhcccccceEEEecccccccccccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCc
Confidence             1122334445553  22222100             0125778999999999999999999999999999999999999


Q ss_pred             EEEECCCC
Q psy8911         257 CIHVKKGM  264 (280)
Q Consensus       257 ~i~v~~g~  264 (280)
                      +++|.+|.
T Consensus       169 ~i~v~~g~  176 (209)
T d2o2xa1         169 QGWLVDGE  176 (209)
T ss_dssp             EEEEETCC
T ss_pred             EEEEeCCC
Confidence            99997664

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=1.3e-20  Score=150.36  Aligned_cols=104  Identities=24%  Similarity=0.312  Sum_probs=89.7

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC-CCccccccceEe-----cCCCHHHHHHHHHHcCCCCC
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI-NLNQYFSNKEIY-----PGPKTTHFESLKKATGIEYK  235 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~-gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~  235 (280)
                      ....+++++.+++..++.+|++++++||+ ........+..+ ++.++|+.+.++     .+|+++.|+.+++++|++|+
T Consensus        81 ~~~~~~~~~~~l~~~l~~~~~~~~i~t~~-~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~  159 (197)
T d2b0ca1          81 VFVALRPEVIAIMHKLREQGHRVVVLSNT-NRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPS  159 (197)
T ss_dssp             CEEEECHHHHHHHHHHHHTTCEEEEEECC-CCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             hccccCchhHHHHHHHHhcCCeEEEEeCc-cHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCC
Confidence            34578999999999999999999999999 666666566665 899999986543     24888999999999999999


Q ss_pred             cEEEEeCCcCCcccccccCceEEEECCCCCH
Q psy8911         236 DMVFFDDEERNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       236 ~~l~igD~~~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      +|+||||+.+|+++|+++||++|+|+...+.
T Consensus       160 ~~l~vgDs~~di~~A~~aG~~ti~v~~~~~~  190 (197)
T d2b0ca1         160 DTVFFDDNADNIEGANQLGITSILVKDKTTI  190 (197)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred             eEEEEeCCHHHHHHHHHcCCEEEEECCCCCC
Confidence            9999999999999999999999999866443

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.76  E-value=2.6e-19  Score=145.21  Aligned_cols=101  Identities=13%  Similarity=0.212  Sum_probs=89.5

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCC
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGI   79 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~   79 (280)
                      ....+.++||+.++|+.|+++|++++|+||++. . +...++.+|+.+||+  .+++++       ++..|+.+++++|+
T Consensus        77 ~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~-~~~~l~~~gl~~~f~--~i~~s~~~~~~Kp~~~~~~~~~~~~~~  152 (204)
T d2go7a1          77 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGN-N-AFTILKDLGVESYFT--EILTSQSGFVRKPSPEAATYLLDKYQL  152 (204)
T ss_dssp             CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-H-HHHHHHHHTCGGGEE--EEECGGGCCCCTTSSHHHHHHHHHHTC
T ss_pred             hcccCcccchHHhhhhcccccccchhhhcccch-h-hhhhhhhcccccccc--cccccccccccchhHHHHHHHHHHhCC
Confidence            455689999999999999999999999999877 4 567899999999999  666543       34559999999999


Q ss_pred             CCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      +|++|+||||+.+|+++|+++||++|++.++.
T Consensus       153 ~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~  184 (204)
T d2go7a1         153 NSDNTYYIGDRTLDVEFAQNSGIQSINFLEST  184 (204)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred             CCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC
Confidence            99999999999999999999999999997663

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=4.3e-19  Score=147.94  Aligned_cols=96  Identities=14%  Similarity=0.132  Sum_probs=85.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEec-----CCCHHHHHHHHHHcCCCCCcE
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYP-----GPKTTHFESLKKATGIEYKDM  237 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~  237 (280)
                      .+.++||+.++|+.|+ +|++++|+||+ ....++..++++|+.+||+.+.++.     +|.+..|..+++++|++|++|
T Consensus       107 ~~~~~~~~~~~L~~L~-~~~~l~i~Tn~-~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~  184 (247)
T d2gfha1         107 HMILADDVKAMLTELR-KEVRLLLLTNG-DRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC  184 (247)
T ss_dssp             TCCCCHHHHHHHHHHH-TTSEEEEEECS-CHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             cCccCccHHHHHHHhh-cccceEEeecc-cchhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhc
Confidence            3578999999999998 57999999999 8888999999999999999765432     477899999999999999999


Q ss_pred             EEEeCCc-CCcccccccCceEEEE
Q psy8911         238 VFFDDEE-RNSHDVSPLGVTCIHV  260 (280)
Q Consensus       238 l~igD~~-~di~~a~~aG~~~i~v  260 (280)
                      +||||+. +|+.+|+++||.++.+
T Consensus       185 l~iGD~~~~Di~~A~~~G~~~~~~  208 (247)
T d2gfha1         185 VMVGDTLETDIQGGLNAGLKATVW  208 (247)
T ss_dssp             EEEESCTTTHHHHHHHTTCSEEEE
T ss_pred             ceeccChHhHHHHHHHcCCeEEEE
Confidence            9999997 6999999999986654

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.74  E-value=2.4e-19  Score=147.05  Aligned_cols=98  Identities=19%  Similarity=0.221  Sum_probs=86.8

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe--------cCCCHHHHHHHHHHcCCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY--------PGPKTTHFESLKKATGIEY  234 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~--------~~~k~~~~~~~~~~~~~~~  234 (280)
                      ...++||+.++|+.|+.+   .+|+||+ ....+...++++++.+||+...+.        .+|+++.|..+++++|++|
T Consensus        83 ~~~~~~g~~~~L~~l~~~---~~i~t~~-~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p  158 (222)
T d2fdra1          83 DVKIIDGVKFALSRLTTP---RCICSNS-SSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP  158 (222)
T ss_dssp             HCCBCTTHHHHHHHCCSC---EEEEESS-CHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCG
T ss_pred             ccchhhhHHHHhhhcccc---ceeeeec-chhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhhCCCC
Confidence            467899999999988754   6799999 889999999999999999975442        1366789999999999999


Q ss_pred             CcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         235 KDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       235 ~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      ++|+||||+..|+++|+++||.+|+|+++.
T Consensus       159 ~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~  188 (222)
T d2fdra1         159 DRVVVVEDSVHGIHGARAAGMRVIGFTGAS  188 (222)
T ss_dssp             GGEEEEESSHHHHHHHHHTTCEEEEECCST
T ss_pred             ceEEEEcCCHHHHHHHHHcCCEEEEEccCC
Confidence            999999999999999999999999999875

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=5.9e-20  Score=149.91  Aligned_cols=101  Identities=18%  Similarity=0.119  Sum_probs=86.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH----HHHHHHhhCCCccccccceEe-----cCCCHHHHHHHHHHcCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEIL----HAKQILNLINLNQYFSNKEIY-----PGPKTTHFESLKKATGIE  233 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~----~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~  233 (280)
                      ...++||+.++|..|+++|++++++||. ...    ..+......++.+||+.+..+     .+|+++.|..+++++|++
T Consensus        97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~-~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~  175 (225)
T d1zd3a1          97 ARKINRPMLQAALMLRKKGFTTAILTNT-WLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS  175 (225)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECC-CCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred             cCCCCccHHHHHHHHHhccCcccccccc-chhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccC
Confidence            4578999999999999999999999997 433    334455566788999976543     248889999999999999


Q ss_pred             CCcEEEEeCCcCCcccccccCceEEEECCCC
Q psy8911         234 YKDMVFFDDEERNSHDVSPLGVTCIHVKKGM  264 (280)
Q Consensus       234 ~~~~l~igD~~~di~~a~~aG~~~i~v~~g~  264 (280)
                      |++|+||||+..|+++|+++||++|+|+.+.
T Consensus       176 p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~  206 (225)
T d1zd3a1         176 PSEVVFLDDIGANLKPARDLGMVTILVQDTD  206 (225)
T ss_dssp             GGGEEEEESCHHHHHHHHHTTCEEEECSSHH
T ss_pred             ccceeEEecCHHHHHHHHHcCCEEEEECCcc
Confidence            9999999999999999999999999998653

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=8.9e-19  Score=140.15  Aligned_cols=127  Identities=13%  Similarity=0.076  Sum_probs=91.8

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHH------------
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEIL------------  194 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~------------  194 (280)
                      +++.||+||||......              ......++++||+.++|+.|+++|++++|+||. +..            
T Consensus         3 ~Av~~DrDGtl~~~~~y--------------~~~~~~~~~~~gv~e~l~~L~~~g~~~~ivTNq-~~i~~~~~~~~~~~~   67 (182)
T d2gmwa1           3 PAIFLDRDGTINVDHGY--------------VHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQ-SGIARGKFTEAQFET   67 (182)
T ss_dssp             CEEEECSBTTTBCCCSS--------------CCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEEC-THHHHTSSCHHHHHH
T ss_pred             CEEEEeCCCCccCCCCC--------------CCCHHHeeECCCHHHHHHHHhhcCchhhhhhcc-chhhhhhhHHHhhhh
Confidence            58899999999642110              112345789999999999999999999999998 421            


Q ss_pred             ---HHHHHHhhCCCc--c-cccc------------ceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         195 ---HAKQILNLINLN--Q-YFSN------------KEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       195 ---~~~~~l~~~gl~--~-~f~~------------~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                         .....+...++.  . +|..            .....+|+|.++..++++++++|++++||||+.+|+++|++||+.
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~  147 (182)
T d2gmwa1          68 LTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVG  147 (182)
T ss_dssp             HHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCS
T ss_pred             hhhhhhhhhhhhcccccceeecccccccccccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCC
Confidence               122223333332  1 1100            000125888999999999999999999999999999999999995


Q ss_pred             -EEEECCCCCHHH
Q psy8911         257 -CIHVKKGMSHAV  268 (280)
Q Consensus       257 -~i~v~~g~~~~~  268 (280)
                       +++|.+|.....
T Consensus       148 ~~~lv~~g~~~~~  160 (182)
T d2gmwa1         148 TKVLVRTGKPITP  160 (182)
T ss_dssp             EEEEESSSSCCCH
T ss_pred             cEEEECCCCCCCc
Confidence             578888775433

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.72  E-value=6.6e-18  Score=138.09  Aligned_cols=103  Identities=20%  Similarity=0.355  Sum_probs=93.2

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCC
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGI   79 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~   79 (280)
                      ......+|||+.++|..|+++|++++|+||++. ..++..++.+|+.++|+  .++++.+       +..|..+++++|+
T Consensus        90 ~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~-~~~~~~l~~~gl~~~f~--~~~~~~~~~~~kp~p~~~~~~~~~~~~  166 (224)
T d2hsza1          90 LCNISRLYPNVKETLEALKAQGYILAVVTNKPT-KHVQPILTAFGIDHLFS--EMLGGQSLPEIKPHPAPFYYLCGKFGL  166 (224)
T ss_dssp             TTSSCEECTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTCGGGCS--EEECTTTSSSCTTSSHHHHHHHHHHTC
T ss_pred             hccccchHHHHHHHHHHHhccCCcccccccccH-HHHHHHHHhcCchhhcc--ccccccccccccccchhhHHHHHHhhh
Confidence            455678999999999999999999999999999 89999999999999999  6666533       3459999999999


Q ss_pred             CCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|++|+||||+..|+++|+++|+.+|++.++..
T Consensus       167 ~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~  199 (224)
T d2hsza1         167 YPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYN  199 (224)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEESSSCS
T ss_pred             hhhccchhcCcHHHHHHHHHcCCeEEEEeCCCC
Confidence            999999999999999999999999999987653

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.72  E-value=1.8e-18  Score=140.55  Aligned_cols=106  Identities=9%  Similarity=0.169  Sum_probs=92.6

Q ss_pred             cCCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhC
Q psy8911           6 ARGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATG   78 (280)
Q Consensus         6 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g   78 (280)
                      .....++++||+.++|+.|++ +++++|+||++. ..++..++.+++.++|+  .+++++       ++..|+.+++++|
T Consensus        76 ~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~-~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~p~~~~~~~~~~~  151 (207)
T d2hdoa1          76 SHYDQIELYPGITSLFEQLPS-ELRLGIVTSQRR-NELESGMRSYPFMMRMA--VTISADDTPKRKPDPLPLLTALEKVN  151 (207)
T ss_dssp             TCGGGCEECTTHHHHHHHSCT-TSEEEEECSSCH-HHHHHHHTTSGGGGGEE--EEECGGGSSCCTTSSHHHHHHHHHTT
T ss_pred             ccccccccccchhhhhhhhcc-cccccccccccc-ccccccccccccccccc--ccccccccccchhhhhhhccccccee
Confidence            345578999999999999985 699999999999 99999999999999999  665542       3445999999999


Q ss_pred             CCCccEEEEeCCcccccccccCCCeEEEEcCCCchhh
Q psy8911          79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTNAI  115 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~~  115 (280)
                      ++|++|+||||+..|+++|+++||.+|++.+|.....
T Consensus       152 ~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~  188 (207)
T d2hdoa1         152 VAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNA  188 (207)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTG
T ss_pred             eeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChh
Confidence            9999999999999999999999999999987654433

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.71  E-value=3e-18  Score=143.72  Aligned_cols=101  Identities=10%  Similarity=0.038  Sum_probs=88.9

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccc-cccceecCC-------ChhHHHHHHHHhCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYF-DHKQIFPGQ-------KTTHFANLKKATGI   79 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~f-d~~~i~~~~-------~~~~~~~~~~~~g~   79 (280)
                      .....++||+.++|+.|+++|++++|+||++. ..++..++.+++.++| |  .+++++       ++..|..+++++|+
T Consensus        95 ~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~-~~~~~~l~~~~l~~~f~d--~~~~~d~~~~~KP~p~~~~~~~~~l~~  171 (257)
T d1swva_          95 PRYASPINGVKEVIASLRERGIKIGSTTGYTR-EMMDIVAKEAALQGYKPD--FLVTPDDVPAGRPYPWMCYKNAMELGV  171 (257)
T ss_dssp             GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCH-HHHHHHHHHHHHTTCCCS--CCBCGGGSSCCTTSSHHHHHHHHHHTC
T ss_pred             hccCccCCcHHHHHHHHHhcccceeecCCCch-hhHHHHHHHHhhcccccc--cccccccccccccChHHHHHHHHHhCC
Confidence            34568999999999999999999999999999 8999999999999998 6  455442       23459999999999


Q ss_pred             C-CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          80 E-YKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        80 ~-p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      . +++|+||||+..|+.+|+++||.+|+|.+|.
T Consensus       172 ~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~  204 (257)
T d1swva_         172 YPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGS  204 (257)
T ss_dssp             CSGGGEEEEESSHHHHHHHHHTTSEEEEECTTC
T ss_pred             CCcceEEEEeCChhhHHHHHHCCCEEEEEccCC
Confidence            5 5999999999999999999999999998764

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.7e-17  Score=137.22  Aligned_cols=98  Identities=12%  Similarity=0.153  Sum_probs=89.1

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe------cCCCHHHHHHHHHHcCCCCCc
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY------PGPKTTHFESLKKATGIEYKD  236 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~------~~~k~~~~~~~~~~~~~~~~~  236 (280)
                      ...+|||+.++|.+|+++|++++|+||+ ....++..++.+|+.++|+.....      .+|++..|..+++++|++|++
T Consensus       125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~  203 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAGMKVYIYSSG-SVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNN  203 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGG
T ss_pred             ccccCCCHHHHHHHHhhccCceeecCCC-cHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCc
Confidence            4578999999999999999999999999 888899999999999998854221      258889999999999999999


Q ss_pred             EEEEeCCcCCcccccccCceEEEEC
Q psy8911         237 MVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       237 ~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      |+||||+.+|+.+|+++||++|+|.
T Consensus       204 ~l~vgD~~~dv~aA~~aG~~ti~v~  228 (253)
T d1zs9a1         204 ILFLTDVTREASAAEEADVHVAVVV  228 (253)
T ss_dssp             EEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHcCCEEEEEe
Confidence            9999999999999999999999996

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.69  E-value=1.3e-17  Score=136.23  Aligned_cols=98  Identities=16%  Similarity=0.288  Sum_probs=89.1

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-----C--hhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-----K--TTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-----~--~~~~~~~~~~~g~~p   81 (280)
                      ....++|++.++++.|+++|++++++||++. ...+..++..++..+||  .++++.     |  +..|+.+++++|++|
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~-~~~~~~~~~~~~~~~fd--~~~~s~~~~~~KP~p~~~~~~~~~~g~~p  166 (220)
T d1zrna_          90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSP-QSIDAVVSHAGLRDGFD--HLLSVDPVQVYKPDNRVYELAEQALGLDR  166 (220)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTTCGGGCS--EEEESGGGTCCTTSHHHHHHHHHHHTSCG
T ss_pred             ccccccchhHHHHHHHHhcCCeEEeecchHH-HHHHHHHhhcccccccc--ceeeeeeeeccccHHHHHHHHHHHhCCCC
Confidence            4568999999999999999999999999999 89999999999999999  666553     2  334999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      ++|+||||+..|+.+|+++||+++++..
T Consensus       167 ~e~l~VgD~~~Di~~A~~aG~~~v~v~r  194 (220)
T d1zrna_         167 SAILFVASNAWDATGARYFGFPTCWINR  194 (220)
T ss_dssp             GGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred             ceEEEEecChHhHHHHHHcCCEEEEEcC
Confidence            9999999999999999999999999964

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.69  E-value=3.2e-17  Score=134.89  Aligned_cols=102  Identities=17%  Similarity=0.167  Sum_probs=86.9

Q ss_pred             CCcceecCCHHHHHHHHHHCC-ceEEEecCCCchHHHHHHHhhcCccccccccceecCCCh-------hHHHHHHHHh--
Q psy8911           8 GAHIKYYPDVPGILKYLKQNN-CLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKT-------THFANLKKAT--   77 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g-~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~-------~~~~~~~~~~--   77 (280)
                      ...++++||+.++|+.|+++| ++++|+||++. ..++..++.+|+.+|||  .++++++.       ..+...++.+  
T Consensus        87 ~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~-~~~~~~l~~~gl~~~fd--~i~~~~~~~~~k~~p~~~~~~~~~~~~  163 (228)
T d2hcfa1          87 REDITLLEGVRELLDALSSRSDVLLGLLTGNFE-ASGRHKLKLPGIDHYFP--FGAFADDALDRNELPHIALERARRMTG  163 (228)
T ss_dssp             GGGEEECTTHHHHHHHHHTCTTEEEEEECSSCH-HHHHHHHHTTTCSTTCS--CEECTTTCSSGGGHHHHHHHHHHHHHC
T ss_pred             ccCceecCchHHHHhhhhccccccccccCCCcc-hhhhhhhhhhccccccc--ccccccccccccchhHHHHHHhhhhcc
Confidence            345789999999999999997 99999999999 89999999999999999  66665422       2255555544  


Q ss_pred             -CCCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          78 -GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        78 -g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                       +++|++|+||||++.|+.+|+++||++|+|.+|..
T Consensus       164 ~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~  199 (228)
T d2hcfa1         164 ANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNF  199 (228)
T ss_dssp             CCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSS
T ss_pred             cCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCC
Confidence             79999999999999999999999999999987644

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.68  E-value=2.7e-17  Score=135.66  Aligned_cols=99  Identities=23%  Similarity=0.341  Sum_probs=86.8

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecC-------CChhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p~   82 (280)
                      .+.++||+.++|+.|+ +|++++++||++. ...+..++.+|+.++||  .++++       ++...|+.+++++|++|+
T Consensus        98 ~~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~-~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~  173 (230)
T d1x42a1          98 YGELYPEVVEVLKSLK-GKYHVGMITDSDT-EYLMAHLDALGIKDLFD--SITTSEEAGFFKPHPRIFELALKKAGVKGE  173 (230)
T ss_dssp             HCCBCTTHHHHHHHHB-TTBEEEEEESSCH-HHHHHHHHHHTCGGGCS--EEEEHHHHTBCTTSHHHHHHHHHHHTCCGG
T ss_pred             hCcccccHHHHHHHhh-ccCceeeeecccc-ccchhhhcccccccccc--cccccccccccchhhHHHHHHHhhhccccc
Confidence            3678999999999997 5799999999999 89999999999999999  66654       233459999999999999


Q ss_pred             cEEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911          83 DMVFFDDEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        83 ~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +|+||||+. +|+++|+++|+.++++..+..
T Consensus       174 ~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~  204 (230)
T d1x42a1         174 EAVYVGDNPVKDCGGSKNLGMTSILLDRKGE  204 (230)
T ss_dssp             GEEEEESCTTTTHHHHHTTTCEEEEECTTSC
T ss_pred             ccceeecCcHhHHHHHHHcCCEEEEECCCCC
Confidence            999999985 689999999999999965443

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.68  E-value=2.3e-17  Score=134.92  Aligned_cols=97  Identities=24%  Similarity=0.327  Sum_probs=86.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p   81 (280)
                      ...+++||+.++|+.|+++|++++++||+..   .+..++.+++.++|+  .++++++       +..|+.+++++|++|
T Consensus        88 ~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~---~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~~~~~~~~l~~~~i~~  162 (221)
T d1o08a_          88 SPADVYPGILQLLKDLRSNKIKIALASASKN---GPFLLERMNLTGYFD--AIADPAEVAASKPAPDIFIAAAHAVGVAP  162 (221)
T ss_dssp             CGGGBCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCGGGCS--EECCTTTSSSCTTSTHHHHHHHHHTTCCG
T ss_pred             ccccccCCceeccccccccccceEEEeecch---hhHHHHhhccccccc--cccccccccccccChHHHHHHHHHcCCCC
Confidence            3578999999999999999999999999765   578999999999999  6665533       334999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++||||||+..|+++|+++||++|+|.++
T Consensus       163 ~~~l~VgD~~~di~~A~~aG~~~i~v~~~  191 (221)
T d1o08a_         163 SESIGLEDSQAGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred             ceEEEEecCHHHHHHHHHcCCEEEEECCh
Confidence            99999999999999999999999999664

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=6.3e-17  Score=133.77  Aligned_cols=101  Identities=12%  Similarity=0.181  Sum_probs=87.7

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccccee------cCCChhHHHHHHHHhCCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIF------PGQKTTHFANLKKATGIEY   81 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~------~~~~~~~~~~~~~~~g~~p   81 (280)
                      .....+|||+.++|.+|+++|++++|+||++. ...+..++..++.++|+.....      ..++...|+.+++++|++|
T Consensus       123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p  201 (253)
T d1zs9a1         123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSV-EAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCST  201 (253)
T ss_dssp             SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCG
T ss_pred             hcccccCCCHHHHHHHHhhccCceeecCCCcH-HHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCc
Confidence            34568899999999999999999999999999 8889999999999888843222      1233445999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      ++|+||||+..|+.+|+++||++|+|..
T Consensus       202 ~~~l~vgD~~~dv~aA~~aG~~ti~v~r  229 (253)
T d1zs9a1         202 NNILFLTDVTREASAAEEADVHVAVVVR  229 (253)
T ss_dssp             GGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             CcEEEEeCCHHHHHHHHHcCCEEEEEeC
Confidence            9999999999999999999999999954

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=9.4e-18  Score=137.09  Aligned_cols=103  Identities=16%  Similarity=0.132  Sum_probs=87.5

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCch---HHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI---QGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATG   78 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~---~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g   78 (280)
                      ....++||+.++|..|+++|++++++||+...   ...+..+..+++.+|||  .+++++       ++..|+.+++++|
T Consensus        94 ~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd--~i~~s~~~~~~KP~p~~~~~~~~~~~  171 (222)
T d1cr6a1          94 AARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFD--FLIESCQVGMIKPEPQIYNFLLDTLK  171 (222)
T ss_dssp             HTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCS--EEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred             hcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhc--eeeehhhccCCCCChHHHHHHHHHhC
Confidence            34689999999999999999999999985331   45566778889999999  666542       3445999999999


Q ss_pred             CCCccEEEEeCCcccccccccCCCeEEEEcCCCch
Q psy8911          79 IEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        79 ~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      ++|++|+||||+..|+++|+++||++|+|.++...
T Consensus       172 v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~  206 (222)
T d1cr6a1         172 AKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASA  206 (222)
T ss_dssp             SCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHH
T ss_pred             CCcceEEEEECCHHHHHHHHHcCCEEEEECCcchH
Confidence            99999999999999999999999999999876553

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.66  E-value=3.9e-17  Score=130.65  Aligned_cols=100  Identities=13%  Similarity=0.160  Sum_probs=85.2

Q ss_pred             CCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIE   80 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~   80 (280)
                      .....++||+.++|+.|+++|++++|+||++. ... ..++++++..+||  .++++++       +..|+.++++++++
T Consensus        75 ~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~-~~~-~~l~~~~l~~~fd--~i~~~~~~~~~KP~p~~~~~~~~~~~~~  150 (187)
T d2fi1a1          75 LEHPILFEGVSDLLEDISNQGGRHFLVSHRND-QVL-EILEKTSIAAYFT--EVVTSSSGFKRKPNPESMLYLREKYQIS  150 (187)
T ss_dssp             TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHH-HHHHHTTCGGGEE--EEECGGGCCCCTTSCHHHHHHHHHTTCS
T ss_pred             hhcCcccchhHHHHHHHHhhhccccccccCcc-chh-hhhhhhccccccc--cccccccccccCCCHHHHHHHHHHcCCC
Confidence            34678999999999999999999999999987 555 5789999999999  6766532       34599999999864


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCCch
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                        +|+||||+..|+++|+++|+++++++++...
T Consensus       151 --~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~  181 (187)
T d2fi1a1         151 --SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNL  181 (187)
T ss_dssp             --SEEEEESSHHHHHHHHHTTCEEEECSCHHHH
T ss_pred             --CeEEEeCCHHHHHHHHHcCCEEEEECCCCCh
Confidence              5999999999999999999999999765443

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.65  E-value=5.3e-17  Score=131.70  Aligned_cols=102  Identities=11%  Similarity=0.211  Sum_probs=90.2

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-----hhHHHHHHHHhCCCC
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-----TTHFANLKKATGIEY   81 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-----~~~~~~~~~~~g~~p   81 (280)
                      .....+++||+.++|+.|+.+ ++++|+||++. ..++..++.+|+..+||  .++++.+     +..|..+++++|++|
T Consensus        79 ~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~-~~~~~~l~~~gl~~~fd--~v~~~~~~~~~~p~~~~~~~~~~~~~~  154 (210)
T d2ah5a1          79 GIYEAQLFPQIIDLLEELSSS-YPLYITTTKDT-STAQDMAKNLEIHHFFD--GIYGSSPEAPHKADVIHQALQTHQLAP  154 (210)
T ss_dssp             GGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEH-HHHHHHHHHTTCGGGCS--EEEEECSSCCSHHHHHHHHHHHTTCCG
T ss_pred             hhhcccchhHHHHHHhhhhcc-cchhhcccccc-hhhhHHHHhhccccccc--ccccccccccccccccchhhhhhhccc
Confidence            344678999999999999976 59999999999 99999999999999999  6665432     334999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++|+||||+.+|+.+|+++|+++|+|.+|..
T Consensus       155 ~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~  185 (210)
T d2ah5a1         155 EQAIIIGDTKFDMLGARETGIQKLAITWGFG  185 (210)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEESSSSS
T ss_pred             ccceeecCCHHHHHHHHHcCCeEEEEcCCCC
Confidence            9999999999999999999999999987654

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.64  E-value=1.5e-17  Score=136.61  Aligned_cols=95  Identities=11%  Similarity=0.054  Sum_probs=81.5

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccc---------eE-e--------cCCCHHHH
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNK---------EI-Y--------PGPKTTHF  223 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~---------~~-~--------~~~k~~~~  223 (280)
                      ..++++||+.++|+.|+++|++++|+||+ ....++.+++++++.++|...         .. +        ..+++...
T Consensus        72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~-~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  150 (226)
T d2feaa1          72 EDAKIREGFREFVAFINEHEIPFYVISGG-MDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  150 (226)
T ss_dssp             HHCCBCTTHHHHHHHHHHHTCCEEEEEEE-EHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             hccchhHHHHHHHHHHHhcccccccCCcc-hhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHH
Confidence            35679999999999999999999999999 999999999999999887421         00 1        12455668


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcCCcccccccCceE
Q psy8911         224 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTC  257 (280)
Q Consensus       224 ~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~  257 (280)
                      ..+++++++++++++||||+.+|+.+|++||+.+
T Consensus       151 ~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~  184 (226)
T d2feaa1         151 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF  184 (226)
T ss_dssp             HHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred             HHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence            9999999999999999999999999999999744

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=2.8e-16  Score=130.51  Aligned_cols=95  Identities=18%  Similarity=0.253  Sum_probs=83.0

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC-------ChhHHHHHHHHhCCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ-------KTTHFANLKKATGIEY   81 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~-------~~~~~~~~~~~~g~~p   81 (280)
                      ..+.++||+.++|+.|+ +|++++|+||++. ...+..++.+|+.+|||  .+++++       ++..|..+++++|++|
T Consensus       106 ~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~-~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~p~~~~~~~~~~~~~~  181 (247)
T d2gfha1         106 QHMILADDVKAMLTELR-KEVRLLLLTNGDR-QTQREKIEACACQSYFD--AIVIGGEQKEEKPAPSIFYHCCDLLGVQP  181 (247)
T ss_dssp             HTCCCCHHHHHHHHHHH-TTSEEEEEECSCH-HHHHHHHHHHTCGGGCS--EEEEGGGSSSCTTCHHHHHHHHHHHTCCG
T ss_pred             ccCccCccHHHHHHHhh-cccceEEeecccc-hhhhhhhhhcccccccc--ccccccccccchhhhhhHHHHHHHhhcCH
Confidence            34678999999999998 5899999999999 88999999999999999  555542       2334999999999999


Q ss_pred             ccEEEEeCCc-ccccccccCCCeEEEE
Q psy8911          82 KDMVFFDDEE-RNSHDVSPLGVTCILV  107 (280)
Q Consensus        82 ~~~l~v~D~~-~~i~aa~~~G~~~i~v  107 (280)
                      ++|+||||+. .|+.+|+++||+++++
T Consensus       182 ~~~l~iGD~~~~Di~~A~~~G~~~~~~  208 (247)
T d2gfha1         182 GDCVMVGDTLETDIQGGLNAGLKATVW  208 (247)
T ss_dssp             GGEEEEESCTTTHHHHHHHTTCSEEEE
T ss_pred             HhcceeccChHhHHHHHHHcCCeEEEE
Confidence            9999999996 6999999999986655

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=1.4e-15  Score=127.12  Aligned_cols=49  Identities=18%  Similarity=0.169  Sum_probs=45.0

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEeCCcC-CcccccccCceEEEECCCCC
Q psy8911         217 GPKTTHFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       217 ~~k~~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|++..|..+++++|++|++|+||||++. ||.+|+++||++|+|.+|..
T Consensus       176 KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~  225 (250)
T d2c4na1         176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVS  225 (250)
T ss_dssp             TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSC
T ss_pred             cchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCC
Confidence            46678899999999999999999999975 99999999999999998864

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=8.4e-17  Score=130.81  Aligned_cols=101  Identities=19%  Similarity=0.161  Sum_probs=84.8

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchH----HHHHHHhhcCccccccccceecC-------CChhHHHHHHHHh
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQ----GAQQLLDLFNWNQYFDHKQIFPG-------QKTTHFANLKKAT   77 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~----~~~~~l~~~~l~~~fd~~~i~~~-------~~~~~~~~~~~~~   77 (280)
                      ....++||+.++|..|+++|++++++||++. .    ..+......++.++||  .++++       ++...|+.+++++
T Consensus        96 ~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~-~~~~~~~~~~~~~~~~~~~fd--~i~~s~~~~~~KP~~~~~~~~~~~~  172 (225)
T d1zd3a1          96 SARKINRPMLQAALMLRKKGFTTAILTNTWL-DDRAERDGLAQLMCELKMHFD--FLIESCQVGMVKPEPQIYKFLLDTL  172 (225)
T ss_dssp             HHCEECHHHHHHHHHHHHTTCEEEEEECCCC-CCSTTHHHHHHHHHHHHTTSS--EEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred             hcCCCCccHHHHHHHHHhccCccccccccch-hhHHHHHHHHhhhcChHhhcc--EEEeccccccchhHHHHHHHHhhhc
Confidence            4568999999999999999999999999865 3    3344455668889999  66654       2334599999999


Q ss_pred             CCCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          78 GIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        78 g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      |++|++|+||||+..|+++|+++||++|+|.++..
T Consensus       173 ~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~  207 (225)
T d1zd3a1         173 KASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT  207 (225)
T ss_dssp             TCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred             ccCccceeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence            99999999999999999999999999999976543

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.60  E-value=5.6e-16  Score=128.23  Aligned_cols=96  Identities=17%  Similarity=0.211  Sum_probs=86.0

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC-------hhHHHHHHHHhCCCCc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK-------TTHFANLKKATGIEYK   82 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~-------~~~~~~~~~~~g~~p~   82 (280)
                      ...++|++.++|+.|+  ++.++++||++. ..++..++.+++.++||  .++++++       +..|+.+++++|++|+
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~-~~~~~~~~~~~~~~~fd--~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~  165 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAP-DMLQALVANAGLTDSFD--AVISVDAKRVFKPHPDSYALVEEVLGVTPA  165 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCH-HHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTSHHHHHHHHHHHCCCGG
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccch-HHHHHHHhhcccccccc--cccccccccccCccHHHHHHHHHHhCCChh
Confidence            4688999999999986  689999999999 89999999999999999  6766532       3349999999999999


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      +|+||||+..||.+|+++||++|+|...
T Consensus       166 e~l~VgD~~~di~~A~~aG~~tv~v~r~  193 (245)
T d1qq5a_         166 EVLFVSSNGFDVGGAKNFGFSVARVARL  193 (245)
T ss_dssp             GEEEEESCHHHHHHHHHHTCEEEEECCS
T ss_pred             hEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence            9999999999999999999999999644

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=2e-16  Score=125.65  Aligned_cols=102  Identities=25%  Similarity=0.389  Sum_probs=88.4

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhc-CccccccccceecC-------CChhHHHHHHHHhCCCC
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLF-NWNQYFDHKQIFPG-------QKTTHFANLKKATGIEY   81 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~-~l~~~fd~~~i~~~-------~~~~~~~~~~~~~g~~p   81 (280)
                      ...+++++.+++..++++|++++++||++. ...+..+..+ ++.++|+  .++++       +++..|+.+++++|++|
T Consensus        82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~-~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~  158 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQGHRVVVLSNTNR-LHTTFWPEEYPEIRDAAD--HIYLSQDLGMRKPEARIYQHVLQAEGFSP  158 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCC-CTTSCCGGGCHHHHHHCS--EEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred             ccccCchhHHHHHHHHhcCCeEEEEeCccH-HHHHHHHHHcccchhhcc--ceeecccccccccchHHHHHHHHhcCCCC
Confidence            467899999999999999999999999988 6666677775 8999999  66654       34455999999999999


Q ss_pred             ccEEEEeCCcccccccccCCCeEEEEcCCCchh
Q psy8911          82 KDMVFFDDEERNSHDVSPLGVTCILVEDGMTNA  114 (280)
Q Consensus        82 ~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~~~  114 (280)
                      ++|+||||+..|+++|+++|+++|++.++.+..
T Consensus       159 ~~~l~vgDs~~di~~A~~aG~~ti~v~~~~~~~  191 (197)
T d2b0ca1         159 SDTVFFDDNADNIEGANQLGITSILVKDKTTIP  191 (197)
T ss_dssp             GGEEEEESCHHHHHHHHTTTCEEEECCSTTHHH
T ss_pred             CeEEEEeCCHHHHHHHHHcCCEEEEECCCCCCH
Confidence            999999999999999999999999998765543

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.58  E-value=3.1e-16  Score=122.54  Aligned_cols=102  Identities=8%  Similarity=0.068  Sum_probs=74.3

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCch--------------HHHHHHHhhcCccc---cccccce-----ecCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI--------------QGAQQLLDLFNWNQ---YFDHKQI-----FPGQK   66 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--------------~~~~~~l~~~~l~~---~fd~~~i-----~~~~~   66 (280)
                      +.+.++||+.++|+.|+++|++++++||++.-              ......+...++..   +|..+..     ...+.
T Consensus        27 ~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~  106 (161)
T d2fpwa1          27 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPK  106 (161)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTS
T ss_pred             HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccc
Confidence            45789999999999999999999999998620              22344555555432   3331110     01234


Q ss_pred             hhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          67 TTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        67 ~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ++.|+.+++++|++|++|+||||+..|+++|+++||+++++.++
T Consensus       107 p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~  150 (161)
T d2fpwa1         107 VKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE  150 (161)
T ss_dssp             SGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             cHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence            55699999999999999999999999999999999999999654

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.57  E-value=5.2e-16  Score=126.37  Aligned_cols=103  Identities=12%  Similarity=0.076  Sum_probs=76.9

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCc--------------hHHHHHHHhhcCc--cccccc--c-ce--------
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSE--------------IQGAQQLLDLFNW--NQYFDH--K-QI--------   61 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~--------------~~~~~~~l~~~~l--~~~fd~--~-~i--------   61 (280)
                      +++++|||+.++|+.|+++||+++|+||++.              .+.+...++..|+  ...|..  . ..        
T Consensus        45 ~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~  124 (209)
T d2o2xa1          45 AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPD  124 (209)
T ss_dssp             GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSS
T ss_pred             HHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccccccccccccc
Confidence            3578999999999999999999999999752              0123333444442  111110  0 00        


Q ss_pred             --ecCCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          62 --FPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        62 --~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                        +..+++++|..++++++++|++|+||||+..|+++|++|||.++++.++.
T Consensus       125 ~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~  176 (209)
T d2o2xa1         125 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGE  176 (209)
T ss_dssp             CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCC
T ss_pred             cccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCC
Confidence              01334566999999999999999999999999999999999999997664

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.57  E-value=3.8e-15  Score=125.00  Aligned_cols=53  Identities=17%  Similarity=0.226  Sum_probs=46.7

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEeCCc-CCcccccccCceEEEECCCCC-HHHH
Q psy8911         217 GPKTTHFESLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCIHVKKGMS-HAVL  269 (280)
Q Consensus       217 ~~k~~~~~~~~~~~~~~~~~~l~igD~~-~di~~a~~aG~~~i~v~~g~~-~~~~  269 (280)
                      +|++..|..+++++|++|++|+||||++ +||..|+++||++|+|.+|.. ...+
T Consensus       185 KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~  239 (261)
T d1vjra_         185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDL  239 (261)
T ss_dssp             TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHH
T ss_pred             CCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHH
Confidence            4677889999999999999999999996 599999999999999998864 4433

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.57  E-value=2.8e-16  Score=120.87  Aligned_cols=129  Identities=14%  Similarity=0.033  Sum_probs=85.3

Q ss_pred             ccceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH---HHHHH
Q psy8911         124 IISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---AKQIL  200 (280)
Q Consensus       124 ~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~---~~~~l  200 (280)
                      ..+++++||+||||.+........         . .......++||+.++|+.|+++|++++++||. +...   ....|
T Consensus         5 ~kpk~vifDiDgTL~~~~~~~~~~---------~-~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R-~~~~~~~t~~~l   73 (149)
T d1ltqa1           5 GKPKAVIFDVDGTLAKMNGRGPYD---------L-EKCDTDVINPMVVELSKMYALMGYQIVVVSGR-ESGTKEDPTKYY   73 (149)
T ss_dssp             TSCEEEEEETBTTTBCCSSCCTTC---------G-GGGGGCCBCHHHHHHHHHHHHTTCEEEEEECS-CCCCSSSTTHHH
T ss_pred             CCCcEEEEEcCCCcEeCCCCCcCC---------c-cccccCccCHHHHHHHHHHHhccCeEEEEecC-cHHHHHHHHHHH
Confidence            457899999999998754332210         0 00123568999999999999999999999998 4221   11222


Q ss_pred             hhCC-----C-ccccccceEec-C---CCHHHHHHHHHHcCCCCCcE-EEEeCCcCCcccccccCceEEEECCC
Q psy8911         201 NLIN-----L-NQYFSNKEIYP-G---PKTTHFESLKKATGIEYKDM-VFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       201 ~~~g-----l-~~~f~~~~~~~-~---~k~~~~~~~~~~~~~~~~~~-l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      +..+     + ..+++...... +   ++.......+.++..++.++ ++|||++.|+++|+++|++|+.|.+|
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1          74 RMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             HHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence            2211     0 11122111111 1   33355677777777766665 57899999999999999999999987

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.53  E-value=8.2e-15  Score=122.56  Aligned_cols=49  Identities=10%  Similarity=0.205  Sum_probs=45.0

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEeCCcC-CcccccccCceEEEECCCCC
Q psy8911         217 GPKTTHFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       217 ~~k~~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|.|.+|..+++++|++|++|+||||++. ||.+|+++||++|+|.+|..
T Consensus       180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~  229 (253)
T d1wvia_         180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFT  229 (253)
T ss_dssp             TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSS
T ss_pred             cCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCC
Confidence            46678899999999999999999999976 99999999999999998863

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=1.1e-15  Score=124.55  Aligned_cols=93  Identities=14%  Similarity=0.210  Sum_probs=72.5

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHH-----------HHhhCCCccccccceEe----cCCCHHHHHHHHH
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQ-----------ILNLINLNQYFSNKEIY----PGPKTTHFESLKK  228 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~-----------~l~~~gl~~~f~~~~~~----~~~k~~~~~~~~~  228 (280)
                      ..+++++.+++.    .+.++++.|+. .......           .++.+||.+||+.+.+.    .+|.+++|..+++
T Consensus        96 ~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~  170 (225)
T d2g80a1          96 APVYADAIDFIK----RKKRVFIYSSG-SVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILR  170 (225)
T ss_dssp             BCCCHHHHHHHH----HCSCEEEECSS-CHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHH
T ss_pred             ccchhhHHHHHh----hHHhhhhhhhc-cchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCCCCChhHhHHHHH
Confidence            345555555544    44667888887 5443332           35667999999975432    3577899999999


Q ss_pred             HcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         229 ATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       229 ~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ++|++|++|+||||+..|+.+|+++||++|+|.
T Consensus       171 ~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~  203 (225)
T d2g80a1         171 DIGAKASEVLFLSDNPLELDAAAGVGIATGLAS  203 (225)
T ss_dssp             HHTCCGGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred             hcccCchhceeecCCHHHHHHHHHcCCEEEEEe
Confidence            999999999999999999999999999999996

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.52  E-value=1.2e-14  Score=115.76  Aligned_cols=115  Identities=12%  Similarity=0.098  Sum_probs=80.4

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCch--------------HHHHHHHhhcCccc---ccc-c-----------c
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI--------------QGAQQLLDLFNWNQ---YFD-H-----------K   59 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--------------~~~~~~l~~~~l~~---~fd-~-----------~   59 (280)
                      +.++++||+.++|+.|+++||+++++||++..              ......+...+..-   +|. +           .
T Consensus        24 ~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~  103 (182)
T d2gmwa1          24 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQV  103 (182)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSC
T ss_pred             HHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeeccccccccccccccc
Confidence            46789999999999999999999999999741              11122222223210   000 0           0


Q ss_pred             ceecCCChhHHHHHHHHhCCCCccEEEEeCCcccccccccCCCe-EEEEcCCCchhhhhcccccc
Q psy8911          60 QIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSPLGVT-CILVEDGMTNAITLYGRSVF  123 (280)
Q Consensus        60 ~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~-~i~v~~~~~~~~~~~~~~~~  123 (280)
                      .....+.+++++.++++++++|++|+||||+..|+++|++||+. ++++.++.......+..+++
T Consensus       104 ~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~  168 (182)
T d2gmwa1         104 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADW  168 (182)
T ss_dssp             CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSE
T ss_pred             ccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCE
Confidence            11123456679999999999999999999999999999999996 57787776544433333444

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.51  E-value=1.2e-14  Score=121.40  Aligned_cols=49  Identities=18%  Similarity=0.325  Sum_probs=44.8

Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEeCCcC-CcccccccCceEEEECCCCC
Q psy8911         217 GPKTTHFESLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCIHVKKGMS  265 (280)
Q Consensus       217 ~~k~~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~~aG~~~i~v~~g~~  265 (280)
                      +|++.+|..+++++|++|++|+||||++. ||+.|+++||++++|.+|..
T Consensus       180 KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~  229 (253)
T d1yv9a1         180 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFT  229 (253)
T ss_dssp             TTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSS
T ss_pred             ccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCC
Confidence            46778899999999999999999999975 99999999999999998864

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.1e-14  Score=117.43  Aligned_cols=95  Identities=14%  Similarity=0.126  Sum_probs=72.7

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccc----------cceEe-cCC--------CHHHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFS----------NKEIY-PGP--------KTTHF  223 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~----------~~~~~-~~~--------k~~~~  223 (280)
                      ...++||+.++++.|+++|++++|+|++ ....++.+++.+|++.++.          ....+ ..+        |....
T Consensus        80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~-~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v  158 (217)
T d1nnla_          80 PPHLTPGIRELVSRLQERNVQVFLISGG-FRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI  158 (217)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred             ccccCHHHHHHHHHHHhCCCEEEEECCC-chHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHH
Confidence            4678999999999999999999999999 8999999999999985421          11111 111        12334


Q ss_pred             HHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         224 ESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       224 ~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                      ..+.+  +.++++|++|||+.+|+.+++.+|..+ .+.
T Consensus       159 ~~~~~--~~~~~~~~~vGDs~~Di~~~~~ag~~v-a~~  193 (217)
T d1nnla_         159 KLLKE--KFHFKKIIMIGDGATDMEACPPADAFI-GFG  193 (217)
T ss_dssp             HHHHH--HHCCSCEEEEESSHHHHTTTTTSSEEE-EEC
T ss_pred             HHHHh--ccCccccEEEEeCHhhHHHHHhCCceE-EEC
Confidence            54444  456799999999999999999999864 443

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.50  E-value=1.3e-14  Score=118.34  Aligned_cols=99  Identities=17%  Similarity=0.173  Sum_probs=84.0

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceec--------CCChhHHHHHHHHhCCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFP--------GQKTTHFANLKKATGIE   80 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~--------~~~~~~~~~~~~~~g~~   80 (280)
                      ..+.++||+.++|+.|+.   +.+|+||+.. ..++..++.+++.++|+...+.+        .+++..|+.+++++|++
T Consensus        82 ~~~~~~~g~~~~L~~l~~---~~~i~t~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~  157 (222)
T d2fdra1          82 RDVKIIDGVKFALSRLTT---PRCICSNSSS-HRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVS  157 (222)
T ss_dssp             HHCCBCTTHHHHHHHCCS---CEEEEESSCH-HHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCC
T ss_pred             hccchhhhHHHHhhhccc---cceeeeecch-hhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhhCCC
Confidence            346889999999998865   5589999999 89999999999999999422211        12334599999999999


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      |++|+||||+..|+.+|+++||++|++.++.
T Consensus       158 p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~  188 (222)
T d2fdra1         158 PDRVVVVEDSVHGIHGARAAGMRVIGFTGAS  188 (222)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEEECCST
T ss_pred             CceEEEEcCCHHHHHHHHHcCCEEEEEccCC
Confidence            9999999999999999999999999998764

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.45  E-value=2.4e-14  Score=126.75  Aligned_cols=103  Identities=16%  Similarity=0.168  Sum_probs=87.6

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEe------------------cCCCHHHHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIY------------------PGPKTTHFE  224 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~------------------~~~k~~~~~  224 (280)
                      .+++++|+.++|+.|+++|++++++||+ .+..++.+++++||.+||+...+.                  .+|.|..|.
T Consensus       213 ~i~p~~~v~~~l~~lk~aGi~v~i~Tg~-~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~  291 (380)
T d1qyia_         213 ILRPVDEVKVLLNDLKGAGFELGIATGR-PYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI  291 (380)
T ss_dssp             BSSCHHHHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred             cccchhhHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHH
Confidence            3456779999999999999999999999 999999999999999999753211                  136677787


Q ss_pred             HHHHH--------------cCCCCCcEEEEeCCcCCcccccccCceEEEECCCCCH
Q psy8911         225 SLKKA--------------TGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKGMSH  266 (280)
Q Consensus       225 ~~~~~--------------~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g~~~  266 (280)
                      .++..              ++.+|++|+||||+.+|+.+|++||+++|+|.+|..-
T Consensus       292 ~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g  347 (380)
T d1qyia_         292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKG  347 (380)
T ss_dssp             HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTB
T ss_pred             HHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCC
Confidence            77654              4677899999999999999999999999999988753

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.39  E-value=9.1e-14  Score=123.00  Aligned_cols=101  Identities=14%  Similarity=0.148  Sum_probs=84.4

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCC------------------ChhHHHH
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQ------------------KTTHFAN   72 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~------------------~~~~~~~   72 (280)
                      +.|+||+.++|+.|+++|++++++||.+. ..++..++.+|+.+||+...+++++                  .+..|..
T Consensus       214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~-~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~  292 (380)
T d1qyia_         214 LRPVDEVKVLLNDLKGAGFELGIATGRPY-TETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA  292 (380)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCH-HHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHH
Confidence            45778999999999999999999999999 9999999999999999854444322                  2233666


Q ss_pred             HHH--------------HhCCCCccEEEEeCCcccccccccCCCeEEEEcCCCc
Q psy8911          73 LKK--------------ATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        73 ~~~--------------~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      ++.              .++..|++|+||||+.+|+.+|+++|+.+|+|.+|..
T Consensus       293 ~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~  346 (380)
T d1qyia_         293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK  346 (380)
T ss_dssp             HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred             HHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCC
Confidence            554              3567899999999999999999999999999987643

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.35  E-value=2.1e-13  Score=109.34  Aligned_cols=96  Identities=23%  Similarity=0.267  Sum_probs=80.3

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceE---------ec------CCCHHHHHHHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEI---------YP------GPKTTHFESLK  227 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~---------~~------~~k~~~~~~~~  227 (280)
                      ...+++|+.+.++.++.+|+.++++|++ ....+....+..++..+|.....         ..      .++......++
T Consensus        73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (210)
T d1j97a_          73 RITPTEGAEETIKELKNRGYVVAVVSGG-FDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA  151 (210)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEEEE-EHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHcCCEEEeeccc-ccccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhHH
Confidence            4578999999999999999999999999 88888889999998877763211         01      12346689999


Q ss_pred             HHcCCCCCcEEEEeCCcCCcccccccCceEEE
Q psy8911         228 KATGIEYKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       228 ~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      ++++++|+++++|||+.+|+..++.||+.++.
T Consensus       152 ~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~  183 (210)
T d1j97a_         152 KIEGINLEDTVAVGDGANDISMFKKAGLKIAF  183 (210)
T ss_dssp             HHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE
T ss_pred             HHhcccccceEEecCCcChHHHHHHCCCCEEE
Confidence            99999999999999999999999999987543

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.25  E-value=3.3e-12  Score=104.06  Aligned_cols=93  Identities=8%  Similarity=0.004  Sum_probs=77.7

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccc-ceec-----------------CCChhHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHK-QIFP-----------------GQKTTHF   70 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~-~i~~-----------------~~~~~~~   70 (280)
                      ..++++||+.++|+.|+++|++++|+||++. ..++.+++.+++.++|... ..+.                 ..+....
T Consensus        72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~-~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  150 (226)
T d2feaa1          72 EDAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  150 (226)
T ss_dssp             HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             hccchhHHHHHHHHHHHhcccccccCCcchh-hhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHH
Confidence            3467999999999999999999999999999 9999999999988877311 0100                 1112227


Q ss_pred             HHHHHHhCCCCccEEEEeCCcccccccccCCC
Q psy8911          71 ANLKKATGIEYKDMVFFDDEERNSHDVSPLGV  102 (280)
Q Consensus        71 ~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~  102 (280)
                      ..++++++++|++|+|||||.+|+.+|++||+
T Consensus       151 ~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~  182 (226)
T d2feaa1         151 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDL  182 (226)
T ss_dssp             HHHHHHHCCTTCEEEEEECCGGGHHHHHTCSE
T ss_pred             HHHHHHhcCCCceEEEEeCchhhHHHHHHCCE
Confidence            89999999999999999999999999999996

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.20  E-value=9.1e-12  Score=100.63  Aligned_cols=93  Identities=20%  Similarity=0.301  Sum_probs=72.1

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHH-----------HHhhcCccccccccceecC------CChhHHHH
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQ-----------LLDLFNWNQYFDHKQIFPG------QKTTHFAN   72 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~-----------~l~~~~l~~~fd~~~i~~~------~~~~~~~~   72 (280)
                      ...+++++.+++.    .+..+++.|+... .....           .++.+++.+||+  .++++      ++...|+.
T Consensus        95 ~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~Fd--~v~~~~~~~~KP~p~~f~~  167 (225)
T d2g80a1          95 KAPVYADAIDFIK----RKKRVFIYSSGSV-KAQKLLFGYVQDPNAPAHDSLDLNSYID--GYFDINTSGKKTETQSYAN  167 (225)
T ss_dssp             CBCCCHHHHHHHH----HCSCEEEECSSCH-HHHHHHHHSBCCTTCTTSCCBCCGGGCC--EEECHHHHCCTTCHHHHHH
T ss_pred             cccchhhHHHHHh----hHHhhhhhhhccc-hhhhhhhhhhhhhHHHHHHhcCCccccc--eeeeccccCCCCChhHhHH
Confidence            3455666666554    4567788888877 44333           346678999999  66654      33445999


Q ss_pred             HHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          73 LKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        73 ~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                      +++++|++|++|+||||+..|+.+|+++||++|+|..
T Consensus       168 ~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r  204 (225)
T d2g80a1         168 ILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR  204 (225)
T ss_dssp             HHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred             HHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeC
Confidence            9999999999999999999999999999999999954

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.11  E-value=1.1e-10  Score=96.64  Aligned_cols=46  Identities=17%  Similarity=0.161  Sum_probs=41.9

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcc-cccccccCCCeEEEEcCCCchhh
Q psy8911          70 FANLKKATGIEYKDMVFFDDEER-NSHDVSPLGVTCILVEDGMTNAI  115 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~-~i~aa~~~G~~~i~v~~~~~~~~  115 (280)
                      |..+++++|++|++|+||||++. ||.+|+++||++|+|.+|.....
T Consensus       182 ~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~  228 (250)
T d2c4na1         182 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLD  228 (250)
T ss_dssp             HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGG
T ss_pred             HhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHH
Confidence            99999999999999999999975 99999999999999988765444

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.08  E-value=1.2e-10  Score=94.26  Aligned_cols=114  Identities=15%  Similarity=0.085  Sum_probs=84.6

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      .|++.||+||||++.                      .-.+.+.+.+.|++|+++|++++++|++ ....++..+..+++
T Consensus         2 iK~i~~D~DGTL~~~----------------------~~~i~~~~~~~l~~l~~~gi~v~~~TGR-~~~~~~~~~~~~~~   58 (230)
T d1wr8a_           2 IKAISIDIDGTITYP----------------------NRMIHEKALEAIRRAESLGIPIMLVTGN-TVQFAEAASILIGT   58 (230)
T ss_dssp             CCEEEEESTTTTBCT----------------------TSCBCHHHHHHHHHHHHTTCCEEEECSS-CHHHHHHHHHHHTC
T ss_pred             ceEEEEecCCCCcCC----------------------CCccCHHHHHHHHHHHhCCCeEEEEeCC-cHHHHHHHHHhcCC
Confidence            478999999999752                      1124577899999999999999999999 77777777666555


Q ss_pred             cccccc--------------------------------------------------------------------------
Q psy8911         206 NQYFSN--------------------------------------------------------------------------  211 (280)
Q Consensus       206 ~~~f~~--------------------------------------------------------------------------  211 (280)
                      ...+..                                                                          
T Consensus        59 ~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (230)
T d1wr8a_          59 SGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAV  138 (230)
T ss_dssp             CSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEE
T ss_pred             CcccccccceeeeccccccccccccHHHHHHHHHHHhcccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEe
Confidence            321100                                                                          


Q ss_pred             -----ceEec--CCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         212 -----KEIYP--GPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       212 -----~~~~~--~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                           +.+.+  .+|+..++.+++++|++|+++++|||+.+|+...+.+|.. +.|.++
T Consensus       139 ~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~-vav~na  196 (230)
T d1wr8a_         139 DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQA  196 (230)
T ss_dssp             ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred             eCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeE-EEECCC
Confidence                 00000  1445668999999999999999999999999999999975 555443

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=6e-11  Score=94.37  Aligned_cols=121  Identities=15%  Similarity=0.174  Sum_probs=83.8

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceec-cCCCHHHHHHHHhhCCcEEEEEcCCCc--------HH--
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIK-YYRGVPEILRYLKENKCLVAAASRTSE--------IL--  194 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~L~~L~~~g~~~~i~T~~~~--------~~--  194 (280)
                      .+...||.||||+......           .+-....... ++|++.+.|+.|+++||.++|+||- .        .+  
T Consensus        21 ~Kia~fDrDGtLik~~~~~-----------~~~~~~~d~~~l~~~v~~~i~~L~~~gy~iiIvTNQ-~gI~rg~~s~~~~   88 (195)
T d1yj5a1          21 GKVAAFDLDGTLITTRSGK-----------VFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQ-MGIGRGKLPAEVF   88 (195)
T ss_dssp             SCEEEECSBTTTEECSSSC-----------SSCSSTTCCEESCTTHHHHHHHHHHHTCEEEEEEEC-HHHHHTSSCHHHH
T ss_pred             CcEEEEECCCceEeeCCCC-----------cCCCChhhceeccCCHHHHHHHHHhCCcEEEEecCc-chhccCCcCHHHH
Confidence            4688999999996421110           0001122233 4799999999999999999999995 2        11  


Q ss_pred             --HHHHHHhhCCCccccc-cc--eEecCCCHHHHHHHHHHcC----CCCCcEEEEeCC-----------------cCCcc
Q psy8911         195 --HAKQILNLINLNQYFS-NK--EIYPGPKTTHFESLKKATG----IEYKDMVFFDDE-----------------ERNSH  248 (280)
Q Consensus       195 --~~~~~l~~~gl~~~f~-~~--~~~~~~k~~~~~~~~~~~~----~~~~~~l~igD~-----------------~~di~  248 (280)
                        ..+.+++.+++...+- ..  ....+|++.++..++++++    ++.++++||||.                 ..|++
T Consensus        89 ~~~~~~i~~~l~~~~~i~~~~~~~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~  168 (195)
T d1yj5a1          89 KGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRL  168 (195)
T ss_dssp             HHHHHHHHHHHTSCCEEEEECSSSSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHH
T ss_pred             HHHHHHHHHHcCCCccEEEecCccccCCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHH
Confidence              2355666666542111 10  0012488899999999975    889999999994                 48999


Q ss_pred             cccccCceEE
Q psy8911         249 DVSPLGVTCI  258 (280)
Q Consensus       249 ~a~~aG~~~i  258 (280)
                      .|+++|++..
T Consensus       169 fA~N~gikF~  178 (195)
T d1yj5a1         169 FALNVGLPFA  178 (195)
T ss_dssp             HHHHHTCCEE
T ss_pred             HHHHCCCccc
Confidence            9999999964

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.06  E-value=1.2e-10  Score=94.78  Aligned_cols=115  Identities=13%  Similarity=0.075  Sum_probs=85.7

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      |.+++.||+||||++..                      -.+.+++.+.|+.|+++|++++++|++ ....+....+.++
T Consensus         2 miKli~~D~DGTL~~~~----------------------~~i~~~~~~al~~l~~~g~~v~~~TGr-~~~~~~~~~~~~~   58 (225)
T d1l6ra_           2 MIRLAAIDVDGNLTDRD----------------------RLISTKAIESIRSAEKKGLTVSLLSGN-VIPVVYALKIFLG   58 (225)
T ss_dssp             CCCEEEEEHHHHSBCTT----------------------SCBCHHHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHT
T ss_pred             CeEEEEEecCCCCcCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEEcCC-chhhhHHHHHHcC
Confidence            67899999999997521                      224478999999999999999999999 7776777777666


Q ss_pred             Ccccccc----------------------------------------------c--------------------------
Q psy8911         205 LNQYFSN----------------------------------------------K--------------------------  212 (280)
Q Consensus       205 l~~~f~~----------------------------------------------~--------------------------  212 (280)
                      +..++-.                                              .                          
T Consensus        59 ~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  138 (225)
T d1l6ra_          59 INGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFY  138 (225)
T ss_dssp             CCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEE
T ss_pred             CCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEE
Confidence            6431100                                              0                          


Q ss_pred             -----eEec-C-CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         213 -----EIYP-G-PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       213 -----~~~~-~-~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                           .+.+ + .|...++.+++++|++++++++|||+.+|+...+.+|.. |.|.++
T Consensus       139 ~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~-vav~na  195 (225)
T d1l6ra_         139 SGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANA  195 (225)
T ss_dssp             ETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTS
T ss_pred             CCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeE-EEECCC
Confidence                 0000 1 233457889999999999999999999999999999975 455443

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.02  E-value=1.4e-10  Score=96.23  Aligned_cols=43  Identities=19%  Similarity=0.339  Sum_probs=40.2

Q ss_pred             HHHHHHHhCCCCccEEEEeCCc-ccccccccCCCeEEEEcCCCc
Q psy8911          70 FANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~  112 (280)
                      |+.+++++|++|++|+||||+. .||++|+++||++++|.+|..
T Consensus       186 ~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~  229 (253)
T d1yv9a1         186 MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFT  229 (253)
T ss_dssp             HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSS
T ss_pred             HHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCC
Confidence            8999999999999999999996 599999999999999988754

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=99.01  E-value=4.1e-10  Score=88.37  Aligned_cols=114  Identities=18%  Similarity=0.245  Sum_probs=87.3

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHH--HHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPE--ILRYLKENKCLVAAASRTSEILHAKQILNLI  203 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~  203 (280)
                      .++++||+||+|.|....             +...+..++-|. +.+  -++.|++.|+.++++|.. ....+....+.+
T Consensus         5 ik~~i~DvDGVlTDG~v~-------------~~~dG~e~k~F~-~~Dg~gi~~l~~~gi~~~iis~~-~~~~v~~~~~~l   69 (177)
T d1k1ea_           5 IKFVITDVDGVLTDGQLH-------------YDANGEAIKSFH-VRDGLGIKMLMDADIQVAVLSGR-DSPILRRRIADL   69 (177)
T ss_dssp             CCEEEEECTTTTSCSEEE-------------EETTEEEEEEEE-HHHHHHHHHHHHTTCEEEEEESC-CCHHHHHHHHHH
T ss_pred             CeEEEEccCCcccCCeEE-------------EeCCCCEEEEEE-CcchHHHHHHhhhcEEEEEecCC-chhHHHHHHhhh
Confidence            478999999999873221             122222232221 222  368899999999999999 778888889999


Q ss_pred             CCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEE
Q psy8911         204 NLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  258 (280)
Q Consensus       204 gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i  258 (280)
                      ++...+..    ..+|...+..+++++++++++++||||..+|+..-+.+|..++
T Consensus        70 ~~~~~~~~----~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~sia  120 (177)
T d1k1ea_          70 GIKLFFLG----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFA  120 (177)
T ss_dssp             TCCEEEES----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             cccccccc----cccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEE
Confidence            88766543    3467788899999999999999999999999999999997644

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.96  E-value=7.2e-11  Score=89.85  Aligned_cols=98  Identities=12%  Similarity=0.025  Sum_probs=67.3

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHH---HHHHhhcC-----c-cccccccceecCC------ChhHHHHHH
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGA---QQLLDLFN-----W-NQYFDHKQIFPGQ------KTTHFANLK   74 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~---~~~l~~~~-----l-~~~fd~~~i~~~~------~~~~~~~~~   74 (280)
                      ...++||+.++|+.|+++|++++++||.+. ...   ...++..+     + ...++  ......      +...-...+
T Consensus        34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~-~~~~~t~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~k~~~l  110 (149)
T d1ltqa1          34 TDVINPMVVELSKMYALMGYQIVVVSGRES-GTKEDPTKYYRMTRKWVEDIAGVPLV--MQCQREQGDTRKDDVVKEEIF  110 (149)
T ss_dssp             GCCBCHHHHHHHHHHHHTTCEEEEEECSCC-CCSSSTTHHHHHHHHHHHHTTCCCCS--EEEECCTTCCSCHHHHHHHHH
T ss_pred             cCccCHHHHHHHHHHHhccCeEEEEecCcH-HHHHHHHHHHHHHhhhhhhcCCCcEE--EeecccccccCCchHHHHHHH
Confidence            357899999999999999999999999975 222   22222221     1 12222  222211      112255666


Q ss_pred             HHhCCCCcc-EEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          75 KATGIEYKD-MVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        75 ~~~g~~p~~-~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      +++..++.+ +++|||++.||++|+++|++++.|.+|
T Consensus       111 ~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1         111 WKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             HHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence            676666655 567899999999999999999999776

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.96  E-value=1.5e-09  Score=90.88  Aligned_cols=58  Identities=14%  Similarity=0.103  Sum_probs=47.7

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      |++.||+||||++.                    ...  +-+.+.+.|++|+++|++++++|++ +...+...++.+++.
T Consensus         2 Kli~~DlDGTLl~~--------------------~~~--i~~~~~~~l~~l~~~Gi~~~i~TGR-~~~~~~~~~~~l~~~   58 (285)
T d1nrwa_           2 KLIAIDLDGTLLNS--------------------KHQ--VSLENENALRQAQRDGIEVVVSTGR-AHFDVMSIFEPLGIK   58 (285)
T ss_dssp             CEEEEECCCCCSCT--------------------TSC--CCHHHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHGGGTCC
T ss_pred             eEEEEECCccccCC--------------------CCc--cCHHHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHhCCC
Confidence            68999999999852                    112  3478899999999999999999999 778888888888765


Q ss_pred             c
Q psy8911         207 Q  207 (280)
Q Consensus       207 ~  207 (280)
                      .
T Consensus        59 ~   59 (285)
T d1nrwa_          59 T   59 (285)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=98.93  E-value=1.3e-10  Score=96.37  Aligned_cols=94  Identities=12%  Similarity=0.044  Sum_probs=61.9

Q ss_pred             HHHHHHHHHCCceEEEecCCCchHHHHHHHhhcC---ccccccc-----cceecCCChhHHHHHHHHhCCCCccEEEEeC
Q psy8911          18 PGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFN---WNQYFDH-----KQIFPGQKTTHFANLKKATGIEYKDMVFFDD   89 (280)
Q Consensus        18 ~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~---l~~~fd~-----~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D   89 (280)
                      ..++..+..++....|+||... ..........+   +..++..     ...++.+.+..|..+++++|++|++|+||||
T Consensus       127 ~~~~~~~~~~~~~~~i~tn~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGD  205 (253)
T d1wvia_         127 KLTLATLAIQKGAVFIGTNPDL-NIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGD  205 (253)
T ss_dssp             HHHHHHHHHHTTCEEEESCCCS-EEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEES
T ss_pred             HHHHHhhhhhhccccccCCCCc-eeEcCCcccccCCcchhcccccccceeEEeccCCcccceehhhhccccccceEEEcC
Confidence            3444555566677789999754 22111000111   1111110     0122244556699999999999999999999


Q ss_pred             Ccc-cccccccCCCeEEEEcCCCc
Q psy8911          90 EER-NSHDVSPLGVTCILVEDGMT  112 (280)
Q Consensus        90 ~~~-~i~aa~~~G~~~i~v~~~~~  112 (280)
                      +.. ||.+|+++||++|+|.+|..
T Consensus       206 s~~~DI~gA~~aG~~si~V~~G~~  229 (253)
T d1wvia_         206 NYLTDITAGIKNDIATLLVTTGFT  229 (253)
T ss_dssp             CTTTTHHHHHHTTCEEEEESSSSS
T ss_pred             ChHHHHHHHHHCCCCEEEECCCCC
Confidence            965 99999999999999988754

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=8.7e-10  Score=89.34  Aligned_cols=96  Identities=15%  Similarity=0.203  Sum_probs=71.2

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc--ccc-c-----ceecC--------CChhH---
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY--FDH-K-----QIFPG--------QKTTH---   69 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~--fd~-~-----~i~~~--------~~~~~---   69 (280)
                      ..+.++||+.++++.|+++|++++|+|++.. ..++.+++.+|+..+  |.. .     ..+.+        ....+   
T Consensus        79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~-~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~  157 (217)
T d1nnla_          79 QPPHLTPGIRELVSRLQERNVQVFLISGGFR-SIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKV  157 (217)
T ss_dssp             SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHH
T ss_pred             hccccCHHHHHHHHHHHhCCCEEEEECCCch-HHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHH
Confidence            3467899999999999999999999999999 899999999998643  210 0     11111        01111   


Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEc
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~  108 (280)
                      .+.+.+  +.++++|++|||+.+|+.+++.+|.. +.+.
T Consensus       158 v~~~~~--~~~~~~~~~vGDs~~Di~~~~~ag~~-va~~  193 (217)
T d1nnla_         158 IKLLKE--KFHFKKIIMIGDGATDMEACPPADAF-IGFG  193 (217)
T ss_dssp             HHHHHH--HHCCSCEEEEESSHHHHTTTTTSSEE-EEEC
T ss_pred             HHHHHh--ccCccccEEEEeCHhhHHHHHhCCce-EEEC
Confidence            333333  46789999999999999999999975 4443

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=98.92  E-value=2.5e-09  Score=88.73  Aligned_cols=44  Identities=20%  Similarity=0.259  Sum_probs=40.8

Q ss_pred             HHHHHHHhCCCCccEEEEeCCc-ccccccccCCCeEEEEcCCCch
Q psy8911          70 FANLKKATGIEYKDMVFFDDEE-RNSHDVSPLGVTCILVEDGMTN  113 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~~~G~~~i~v~~~~~~  113 (280)
                      |..+++++|++|++|+||||+. .||.+|+++||++|+|.+|...
T Consensus       191 ~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~  235 (261)
T d1vjra_         191 VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETT  235 (261)
T ss_dssp             HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCC
T ss_pred             HHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCC
Confidence            9999999999999999999996 5999999999999999887543

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.82  E-value=3.6e-09  Score=83.68  Aligned_cols=95  Identities=14%  Similarity=0.115  Sum_probs=76.9

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccce---------EecCCCHHHHHHHHHHcCCC
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKE---------IYPGPKTTHFESLKKATGIE  233 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~---------~~~~~k~~~~~~~~~~~~~~  233 (280)
                      ....+++....+..++ .+++.+++|.+ ...........+++..++....         ....++.......+++++++
T Consensus        67 ~~~~~~~~~~~~~~~~-~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  144 (206)
T d1rkua_          67 TLKPLEGAVEFVDWLR-ERFQVVILSDT-FYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL  144 (206)
T ss_dssp             TCCCCTTHHHHHHHHH-TTSEEEEEEEE-EHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred             hccccchHHHHHHHhh-cCceEEEeccC-chHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhccc
Confidence            4567889988887765 67999999999 8888888999998887654321         11235566678888999999


Q ss_pred             CCcEEEEeCCcCCcccccccCceEEE
Q psy8911         234 YKDMVFFDDEERNSHDVSPLGVTCIH  259 (280)
Q Consensus       234 ~~~~l~igD~~~di~~a~~aG~~~i~  259 (280)
                      ++++++|||+.+|+...+.||+.+..
T Consensus       145 ~~eviaiGDg~NDi~Ml~~Ag~gIAm  170 (206)
T d1rkua_         145 YYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             TCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             ccceEEecCCccCHHHHHhCCccEEE
Confidence            99999999999999999999997554

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=98.75  E-value=2.5e-08  Score=80.18  Aligned_cols=58  Identities=17%  Similarity=0.099  Sum_probs=47.4

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      |-++.+|+||||++.                   ..   .+.+.+.+.|++|+++|++++++|++ +...+...++.+++
T Consensus         4 ~~li~~DlDGTLl~~-------------------~~---~i~~~~~~al~~l~~~Gi~~~i~TGR-~~~~~~~~~~~~~~   60 (232)
T d1xvia_           4 PLLVFSDLDGTLLDS-------------------HS---YDWQPAAPWLTRLREANVPVILCSSK-TSAEMLYLQKTLGL   60 (232)
T ss_dssp             CEEEEEECTTTTSCS-------------------SC---CSCCTTHHHHHHHHHTTCCEEEECSS-CHHHHHHHHHHTTC
T ss_pred             CEEEEEECCCCccCC-------------------cC---cCCHHHHHHHHHHHHCCCEEEEEeCC-ChhhchhHHHHhcc
Confidence            346778999999852                   11   24578899999999999999999999 88888888888877


Q ss_pred             c
Q psy8911         206 N  206 (280)
Q Consensus       206 ~  206 (280)
                      .
T Consensus        61 ~   61 (232)
T d1xvia_          61 Q   61 (232)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.73  E-value=7.5e-09  Score=85.83  Aligned_cols=42  Identities=10%  Similarity=0.094  Sum_probs=36.0

Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         221 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      ..+..+++++|++++++++|||+.+|+...+.+|..++ |.++
T Consensus       193 ~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~va-m~Na  234 (269)
T d1rlma_         193 NGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA-MGNA  234 (269)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-CTTC
T ss_pred             HHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEE-eCCC
Confidence            45889999999999999999999999999998887754 5444

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.73  E-value=6.5e-10  Score=88.62  Aligned_cols=132  Identities=9%  Similarity=0.030  Sum_probs=81.9

Q ss_pred             ceeEEEecCCCCCCcccccc------cCccc-ccC-----CeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCc-
Q psy8911         126 SNHLSKKLDYTLWPLHVHDL------VAPFK-KIG-----QKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSE-  192 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~------~~~~~-~~~-----~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~-  192 (280)
                      |-.++||+|.|+++......      .+.-. ...     ............+.||+.++++.++++|+++..+||... 
T Consensus        35 P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~  114 (209)
T d2b82a1          35 PMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPT  114 (209)
T ss_dssp             CCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred             CceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeCCchh
Confidence            45899999999998633211      01000 000     011111122345788999999999999999999999822 


Q ss_pred             -HHHHHHHH-hhCCCcccccc-ceE-ecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEEC
Q psy8911         193 -ILHAKQIL-NLINLNQYFSN-KEI-YPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVK  261 (280)
Q Consensus       193 -~~~~~~~l-~~~gl~~~f~~-~~~-~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~  261 (280)
                       .+.+...| +.+|+..--.. +.. .+.+.+..-+..++++++    .+++||...|+.+|+++|+++|.|.
T Consensus       115 ~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~iRi~  183 (209)
T d2b82a1         115 KTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRIL  183 (209)
T ss_dssp             SSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred             hHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHHcCe----EEEecCCHHHHhHHHHcCCCceEee
Confidence             22334445 55887532221 111 122222223333466666    7899999999999999999999984

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.71  E-value=1.3e-08  Score=84.34  Aligned_cols=58  Identities=10%  Similarity=0.068  Sum_probs=46.1

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      .|++.||+||||++.                    ..  .+.+.+.+.|++|+++|++++++|++ ....+...++.+++
T Consensus         4 iKli~~DlDGTL~~~--------------------~~--~i~~~~~~al~~L~~~gi~v~i~TGR-~~~~~~~~~~~l~l   60 (271)
T d1rkqa_           4 IKLIAIDMDGTLLLP--------------------DH--TISPAVKNAIAAARARGVNVVLTTGR-PYAGVHNYLKELHM   60 (271)
T ss_dssp             CCEEEECCCCCCSCT--------------------TS--CCCHHHHHHHHHHHHTTCEEEEECSS-CGGGTHHHHHHTTC
T ss_pred             eeEEEEeCCccccCC--------------------CC--ccCHHHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHhcC
Confidence            478999999999852                    11  23477899999999999999999999 77777777777665


Q ss_pred             c
Q psy8911         206 N  206 (280)
Q Consensus       206 ~  206 (280)
                      .
T Consensus        61 ~   61 (271)
T d1rkqa_          61 E   61 (271)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.69  E-value=4.1e-08  Score=79.59  Aligned_cols=57  Identities=14%  Similarity=0.053  Sum_probs=47.1

Q ss_pred             cceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCC
Q psy8911         125 ISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLIN  204 (280)
Q Consensus       125 ~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~g  204 (280)
                      |.|++.+|+||||++.                   ..     .+...+.|++|+++|++++++|++ +...+...++.++
T Consensus         1 miKli~~DlDGTLl~~-------------------~~-----~~~~~~ai~~l~~~G~~~~~aTGR-~~~~~~~~~~~~~   55 (243)
T d1wzca1           1 MIRLIFLDIDKTLIPG-------------------YE-----PDPAKPIIEELKDMGFEIIFNSSK-TRAEQEYYRKELE   55 (243)
T ss_dssp             CEEEEEECCBTTTBSS-------------------SC-----SGGGHHHHHHHHHTTEEEEEECSS-CHHHHHHHHHHHT
T ss_pred             CcEEEEEeCCCCCCCC-------------------CC-----CHHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHhc
Confidence            5789999999999852                   11     134678999999999999999999 8888888888887


Q ss_pred             Cc
Q psy8911         205 LN  206 (280)
Q Consensus       205 l~  206 (280)
                      +.
T Consensus        56 ~~   57 (243)
T d1wzca1          56 VE   57 (243)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.58  E-value=3e-08  Score=78.30  Aligned_cols=97  Identities=18%  Similarity=0.221  Sum_probs=78.6

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccccee-------------cCC--ChhHHHHH
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIF-------------PGQ--KTTHFANL   73 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~-------------~~~--~~~~~~~~   73 (280)
                      ....+++|+.+++..|+.+|+.++++|++.. .......+..+...+|......             ...  +......+
T Consensus        72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (210)
T d1j97a_          72 KRITPTEGAEETIKELKNRGYVVAVVSGGFD-IAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI  150 (210)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEH-HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHcCCEEEeeccccc-ccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhH
Confidence            3467899999999999999999999999999 8889999999888777621000             001  11228888


Q ss_pred             HHHhCCCCccEEEEeCCcccccccccCCCeEEE
Q psy8911          74 KKATGIEYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        74 ~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      ++.++++|+++++|||+.+|+.+++.+|+.++.
T Consensus       151 ~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~  183 (210)
T d1j97a_         151 AKIEGINLEDTVAVGDGANDISMFKKAGLKIAF  183 (210)
T ss_dssp             HHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE
T ss_pred             HHHhcccccceEEecCCcChHHHHHHCCCCEEE
Confidence            899999999999999999999999999986543

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=98.55  E-value=5.3e-08  Score=80.73  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=35.6

Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         221 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      ..+..+++.++++++++++|||+.+|+...+.+|.. +.+.++
T Consensus       210 ~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~-va~~na  251 (283)
T d2b30a1         210 TGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANA  251 (283)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTC
T ss_pred             HHHHHHhhhcccccceEEEecCChhhHHHHHhCCcE-EEeCCC
Confidence            347778899999999999999999999999999975 555554

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.54  E-value=3.4e-08  Score=81.50  Aligned_cols=43  Identities=9%  Similarity=0.244  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         220 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      ...++.+++++|++++++++|||+.+|+...+.+|.. +.|.++
T Consensus       188 ~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~s-vav~na  230 (260)
T d2rbka1         188 QKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIG-VAMGQA  230 (260)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred             HHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeE-EEeCCC
Confidence            3458899999999999999999999999999999985 677665

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.53  E-value=1.1e-07  Score=77.41  Aligned_cols=41  Identities=10%  Similarity=0.085  Sum_probs=35.2

Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECC
Q psy8911         221 THFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~  262 (280)
                      .....+++++|++++++++|||+.+|+..-+.+|.. +.|.+
T Consensus       165 ~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~-vav~n  205 (244)
T d1s2oa1         165 NATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRN  205 (244)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTT
T ss_pred             HHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcE-EEeCC
Confidence            458999999999999999999999999999999854 45543

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.52  E-value=7e-07  Score=66.25  Aligned_cols=107  Identities=14%  Similarity=0.050  Sum_probs=79.9

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      ..+.||.+||+.-.                   ...  .+.|++++.++.|++.|+++.++|+- ....+..+-+.+||+
T Consensus         4 ~~~~~d~~~~~~~g-------------------~~D--~lr~~a~~~I~~L~~~Gi~v~ilTGD-~~~~a~~ia~~lgI~   61 (135)
T d2b8ea1           4 TAVIFDKTGTLTKG-------------------KPD--TLKESAKPAVQELKRMGIKVGMITGD-NWRSAEAISRELNLD   61 (135)
T ss_dssp             CEEEEECCCCCBCS-------------------CCC--CBCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHTCS
T ss_pred             EEEEECCceEEEEe-------------------cCC--CCCccHHHHHHHHHHcCCEEEEEcCc-chhhhhHHHhhhhhh
Confidence            57789988887421                   111  36699999999999999999999988 899999999999998


Q ss_pred             cccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         207 QYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       207 ~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      .+|..      -.|+.-..+.++++-. ..+.|+||..+|..+-+++++.. .+..+
T Consensus        62 ~v~~~------~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgi-a~~~~  110 (135)
T d2b8ea1          62 LVIAE------VLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGI-AVGSG  110 (135)
T ss_dssp             EEECS------CCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEE-EECCC
T ss_pred             hhccc------cchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeee-ecCcc
Confidence            76643      3333333444444443 57889999999999999988764 34443

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=98.39  E-value=5e-07  Score=74.54  Aligned_cols=44  Identities=16%  Similarity=0.320  Sum_probs=37.6

Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         219 KTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       219 k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      |...++.++++++++++++++|||+.+|+...+.+|.. |.+.++
T Consensus       191 K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~s-va~~na  234 (267)
T d1nf2a_         191 KGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAMENA  234 (267)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EECTTS
T ss_pred             hhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcE-EEeCCC
Confidence            33558999999999999999999999999999999975 566554

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=3e-07  Score=72.51  Aligned_cols=93  Identities=16%  Similarity=0.244  Sum_probs=65.9

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCch-----------HHHHHHHhhcCcccc-cc--ccceecCCChhHHHHHHHHhC
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEI-----------QGAQQLLDLFNWNQY-FD--HKQIFPGQKTTHFANLKKATG   78 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-----------~~~~~~l~~~~l~~~-fd--~~~i~~~~~~~~~~~~~~~~g   78 (280)
                      ++|++.+.|+.|+++||.++|+||++.-           ...+.+++.++.... |-  +......+..+++..+++..+
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~RKP~~GM~~~~~~~~n  130 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQAN  130 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCCEEEEECSSSSSSTTSTHHHHHHHHTSS
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCccEEEecCccccCCCccHHHHHHHHHhc
Confidence            4799999999999999999999998530           112345555543211 00  001122345677999999864


Q ss_pred             ----CCCccEEEEeCCc-----------------ccccccccCCCeEE
Q psy8911          79 ----IEYKDMVFFDDEE-----------------RNSHDVSPLGVTCI  105 (280)
Q Consensus        79 ----~~p~~~l~v~D~~-----------------~~i~aa~~~G~~~i  105 (280)
                          ++.++++||||..                 .|++.|.++|++-.
T Consensus       131 ~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         131 EGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             SSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             ccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence                8999999999953                 78999999999854

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=6.2e-08  Score=75.93  Aligned_cols=128  Identities=13%  Similarity=0.010  Sum_probs=81.3

Q ss_pred             eeEEEecCCCCCCccccccc-CcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCC
Q psy8911         127 NHLSKKLDYTLWPLHVHDLV-APFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINL  205 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl  205 (280)
                      .++++|+|+||+.+...... +.+......-.......+...||+.++|+.+.+. +.++|-|.+ .+++++.+++.+.-
T Consensus        16 ~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~-yei~I~Ta~-~~~YA~~il~~ldp   93 (181)
T d1ta0a_          16 ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTAS-LAKYADPVADLLDK   93 (181)
T ss_dssp             CEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSS-CHHHHHHHHHHHCS
T ss_pred             eEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHhc-eEEEEEcCC-cHHHHHHHHHHhcc
Confidence            57899999999864322111 0000000000001122467889999999999988 999999999 99999999999987


Q ss_pred             ccccccceEecC--CCHHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCce
Q psy8911         206 NQYFSNKEIYPG--PKTTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVT  256 (280)
Q Consensus       206 ~~~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~  256 (280)
                      ...|......+.  .....+.+-++.+|-+.+++|+|+|++.....-..-|+.
T Consensus        94 ~~~~~~~~~r~~c~~~~~~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I~  146 (181)
T d1ta0a_          94 WGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVP  146 (181)
T ss_dssp             SCCEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBCC
T ss_pred             CCceeEEEEeeeeeecCCcccccHhhcCCCHHHeEEEcCChhhhhcCccCeeE
Confidence            766654321111  001112334566788999999999999875443333443

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=98.17  E-value=2.2e-06  Score=75.48  Aligned_cols=101  Identities=13%  Similarity=0.178  Sum_probs=79.6

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhh-c--------CccccccccceecCC-Chh----------
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDL-F--------NWNQYFDHKQIFPGQ-KTT----------   68 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~-~--------~l~~~fd~~~i~~~~-~~~----------   68 (280)
                      ..+..-|.+..+|+.||++|.++.++||++. ..++..++. +        .|.++||  .|+.+. |++          
T Consensus       182 kYv~k~~~l~~~L~~lr~~GKklFLiTNS~~-~y~~~~m~y~~~~~~~~g~dWr~lFD--vVIv~A~KP~FF~~~~~~~~  258 (458)
T d2bdea1         182 KYVIREKEVVEGLKHFIRYGKKIFILTNSEY-SYSKLLLDYALSPFLDKGEHWQGLFE--FVITLANKPRFFYDNLRFLS  258 (458)
T ss_dssp             TSEECCHHHHHHHHHHHTTTCEEEEECSSCH-HHHHHHHHHHHGGGSCTTCCGGGTEE--EEEESCCHHHHHHSCCCEEE
T ss_pred             HhhcCChhHHHHHHHHHHcCCeEEEEecCcH-HHHHHHhhhhcccCCCCCCChHHhce--EEEeCCCCCCccCCCCcceE
Confidence            3455567899999999999999999999999 887776655 2        6889999  555432 221          


Q ss_pred             -----------------------HHHHHHHHhCCCCccEEEEeCCc-ccccccc-cCCCeEEEEcCCCc
Q psy8911          69 -----------------------HFANLKKATGIEYKDMVFFDDEE-RNSHDVS-PLGVTCILVEDGMT  112 (280)
Q Consensus        69 -----------------------~~~~~~~~~g~~p~~~l~v~D~~-~~i~aa~-~~G~~~i~v~~~~~  112 (280)
                                             ....+.+-+|..-++++||||+. .||-.++ ..||+|++|-....
T Consensus       259 v~~~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ELe  327 (458)
T d2bdea1         259 VNPENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELG  327 (458)
T ss_dssp             ECTTTCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTHH
T ss_pred             EeCCCCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHHH
Confidence                                   17888899999999999999996 4766665 58999999976643

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=4e-07  Score=76.36  Aligned_cols=91  Identities=10%  Similarity=0.009  Sum_probs=66.0

Q ss_pred             eeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcc----cccc--------ceEe-cCC------CHHHH
Q psy8911         163 LIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQ----YFSN--------KEIY-PGP------KTTHF  223 (280)
Q Consensus       163 ~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~----~f~~--------~~~~-~~~------k~~~~  223 (280)
                      .+.+.||+.++++.|+++|++++|+|++ -...++.+++++|+..    .+..        .... .+|      |....
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG-~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~  211 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAG-IGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA  211 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEE-EHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCC-hHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence            4678999999999999999999999999 8999999999999863    2221        1111 111      11223


Q ss_pred             HHHHHH--cCCCCCcEEEEeCCcCCcccccccC
Q psy8911         224 ESLKKA--TGIEYKDMVFFDDEERNSHDVSPLG  254 (280)
Q Consensus       224 ~~~~~~--~~~~~~~~l~igD~~~di~~a~~aG  254 (280)
                      ......  ..-+.+++++|||+.+|+..|+.+.
T Consensus       212 ~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~  244 (291)
T d2bdua1         212 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA  244 (291)
T ss_dssp             HTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred             hhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence            333332  2336789999999999999988653

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=1.3e-06  Score=69.18  Aligned_cols=96  Identities=16%  Similarity=0.161  Sum_probs=67.2

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCch--HHHHHHH-hhcCccccccccceecCCCh---hHHHHHHHHhCCCCc
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI--QGAQQLL-DLFNWNQYFDHKQIFPGQKT---THFANLKKATGIEYK   82 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--~~~~~~l-~~~~l~~~fd~~~i~~~~~~---~~~~~~~~~~g~~p~   82 (280)
                      ....+.||++++++.++++|++++.+||....  +....-| +.+|+-.--+...++.+++.   ..-..+ +++++   
T Consensus        83 ~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~I-k~y~I---  158 (209)
T d2b82a1          83 EFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWL-QDKNI---  158 (209)
T ss_dssp             GGCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHH-HHTTE---
T ss_pred             cccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHH-HHcCe---
Confidence            34568899999999999999999999997641  2223333 44665221111144444332   224444 66776   


Q ss_pred             cEEEEeCCcccccccccCCCeEEEEcC
Q psy8911          83 DMVFFDDEERNSHDVSPLGVTCILVED  109 (280)
Q Consensus        83 ~~l~v~D~~~~i~aa~~~G~~~i~v~~  109 (280)
                       .+++||...|+.+|+++|+++|-+..
T Consensus       159 -~l~~GD~l~Df~aA~eagi~~iRi~r  184 (209)
T d2b82a1         159 -RIFYGDSDNDITAARDVGARGIRILR  184 (209)
T ss_dssp             -EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred             -EEEecCCHHHHhHHHHcCCCceEeec
Confidence             88999999999999999999999843

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=97.99  E-value=5.8e-06  Score=72.76  Aligned_cols=99  Identities=11%  Similarity=0.099  Sum_probs=78.8

Q ss_pred             eccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhC---------CCccccccceEecCCCH--------------
Q psy8911         164 IKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLI---------NLNQYFSNKEIYPGPKT--------------  220 (280)
Q Consensus       164 ~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~---------gl~~~f~~~~~~~~~k~--------------  220 (280)
                      +..-|.+..+|+.|+++|.++.++||+ .-.+++..++.+         .+.+|||.+++... ||              
T Consensus       184 v~k~~~l~~~L~~lr~~GKklFLiTNS-~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~-KP~FF~~~~~~~~v~~  261 (458)
T d2bdea1         184 VIREKEVVEGLKHFIRYGKKIFILTNS-EYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLAN-KPRFFYDNLRFLSVNP  261 (458)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSS-CHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCC-HHHHHHSCCCEEEECT
T ss_pred             hcCChhHHHHHHHHHHcCCeEEEEecC-cHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCC-CCCccCCCCcceEEeC
Confidence            444578899999999999999999999 889988777762         56689997644311 11              


Q ss_pred             -------------------HHHHHHHHHcCCCCCcEEEEeCCcC-Ccccccc-cCceEEEECCCC
Q psy8911         221 -------------------THFESLKKATGIEYKDMVFFDDEER-NSHDVSP-LGVTCIHVKKGM  264 (280)
Q Consensus       221 -------------------~~~~~~~~~~~~~~~~~l~igD~~~-di~~a~~-aG~~~i~v~~g~  264 (280)
                                         .....+.+.+|..-.++|||||... ||..+++ .|++|++|-...
T Consensus       262 ~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL  326 (458)
T d2bdea1         262 ENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL  326 (458)
T ss_dssp             TTCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTH
T ss_pred             CCCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHH
Confidence                               2267788888999999999999999 7777765 899999997654

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.96  E-value=2.4e-05  Score=59.94  Aligned_cols=97  Identities=8%  Similarity=-0.016  Sum_probs=69.1

Q ss_pred             ccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCcccccc-------------------------ceEecCCC
Q psy8911         165 KYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSN-------------------------KEIYPGPK  219 (280)
Q Consensus       165 ~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~-------------------------~~~~~~~k  219 (280)
                      ++.|++++.++.|++.|+++.++|+- ....+..+-+.+||...-..                         ..++..-.
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD-~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~   98 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGD-NKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE   98 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCC-CHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence            46799999999999999999999999 89999999999998532111                         12333334


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         220 TTHFESLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                      |+.=..+.+.++-.-..+.|+||..+|..+-+.|.+-. .+..|
T Consensus        99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGI-a~~~g  141 (168)
T d1wpga2          99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGI-AMGSG  141 (168)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEE-EETTS
T ss_pred             hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEE-Eeccc
Confidence            43323333333333467999999999999988887653 33444

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=97.95  E-value=9.6e-06  Score=62.79  Aligned_cols=81  Identities=16%  Similarity=0.181  Sum_probs=67.2

Q ss_pred             HHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccccccc
Q psy8911          20 ILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSHDVSP   99 (280)
Q Consensus        20 ~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~   99 (280)
                      -++.|++.|+.++++|.... ...+...+.+++...+.  .  ..++...+...++++|++|++|+||||..+|+..-+.
T Consensus        40 gi~~l~~~gi~~~iis~~~~-~~v~~~~~~l~~~~~~~--~--~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~  114 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRDS-PILRRRIADLGIKLFFL--G--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA  114 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCCC-HHHHHHHHHHTCCEEEE--S--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred             HHHHHhhhcEEEEEecCCch-hHHHHHHhhhccccccc--c--cccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhh
Confidence            58889999999999999998 78888888888755444  1  1234445888999999999999999999999999999


Q ss_pred             CCCeEE
Q psy8911         100 LGVTCI  105 (280)
Q Consensus       100 ~G~~~i  105 (280)
                      +|...+
T Consensus       115 ~g~sia  120 (177)
T d1k1ea_         115 CGTSFA  120 (177)
T ss_dssp             SSEEEE
T ss_pred             CCeEEE
Confidence            997544

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.95  E-value=3.7e-05  Score=56.59  Aligned_cols=85  Identities=9%  Similarity=0.046  Sum_probs=66.1

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                      ++.|++.+.++.|++.|++++++|.... ..++.+-+.+|+..+|-      ...+..-....++++-. ..++|+||..
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~-~~a~~ia~~lgI~~v~~------~~~p~~k~~~v~~~q~~-~~v~~vGDg~   92 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNW-RSAEAISRELNLDLVIA------EVLPHQKSEEVKKLQAK-EVVAFVGDGI   92 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCSEEEC------SCCHHHHHHHHHHHTTT-SCEEEEECSS
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcch-hhhhHHHhhhhhhhhcc------ccchhHHHHHHHHHHcC-CEEEEEeCCC
Confidence            5789999999999999999999998888 88999999999855443      43333333334444433 5789999999


Q ss_pred             ccccccccCCCeE
Q psy8911          92 RNSHDVSPLGVTC  104 (280)
Q Consensus        92 ~~i~aa~~~G~~~  104 (280)
                      +|+.+-+++++-.
T Consensus        93 nD~~aL~~Advgi  105 (135)
T d2b8ea1          93 NDAPALAQADLGI  105 (135)
T ss_dssp             SSHHHHHHSSEEE
T ss_pred             CcHHHHHhCCeee
Confidence            9999988887653

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=5.6e-05  Score=59.02  Aligned_cols=88  Identities=8%  Similarity=0.003  Sum_probs=57.4

Q ss_pred             ceeccCCCHHHHHHHHhhCC-cEEEEEcCCCcHH------HHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCC
Q psy8911         162 TLIKYYRGVPEILRYLKENK-CLVAAASRTSEIL------HAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEY  234 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g-~~~~i~T~~~~~~------~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~  234 (280)
                      ..+.++||+.++|+.|++.| +.+.++|.. ...      ....-|++.......+ ..++.+.|.          .+..
T Consensus        71 ~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~-~~~~~~~~~~k~~Wl~~~~~~~~~~-~~~~t~~K~----------~~~~  138 (195)
T d1q92a_          71 FELEPLPGAVEAVKEMASLQNTDVFICTSP-IKMFKYCPYEKYAWVEKYFGPDFLE-QIVLTRDKT----------VVSA  138 (195)
T ss_dssp             TTCCBCTTHHHHHHHHHHSTTEEEEEEECC-CSCCSSHHHHHHHHHHHHHCGGGGG-GEEECSCST----------TSCC
T ss_pred             hhCCcccCHHHHHHHHhhccCccceEEccc-cccCcchHHHHHHHHHHhcCCCCcc-EEEEccccc----------eecC
Confidence            46789999999999999865 567888886 321      1112233321111112 234444442          1222


Q ss_pred             CcEEEEeCCcCCcccccccCceEEEECCC
Q psy8911         235 KDMVFFDDEERNSHDVSPLGVTCIHVKKG  263 (280)
Q Consensus       235 ~~~l~igD~~~di~~a~~aG~~~i~v~~g  263 (280)
                        -++|+|++.++.+..++|+.+++....
T Consensus       139 --d~lIDD~p~n~~~~~~~g~~~il~~~~  165 (195)
T d1q92a_         139 --DLLIDDRPDITGAEPTPSWEHVLFTAC  165 (195)
T ss_dssp             --SEEEESCSCCCCSCSSCSSEEEEECCT
T ss_pred             --eEEecCcHHHHHHHhcCCCeEEEECCC
Confidence              289999999999999999999999643

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.2e-05  Score=63.93  Aligned_cols=32  Identities=13%  Similarity=0.129  Sum_probs=28.1

Q ss_pred             CCCCCcEEEEeCCc----CCcccccccCceEEEECC
Q psy8911         231 GIEYKDMVFFDDEE----RNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       231 ~~~~~~~l~igD~~----~di~~a~~aG~~~i~v~~  262 (280)
                      +.+++++++|||+.    +|++.-+.+|...+.|.+
T Consensus       195 ~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n  230 (244)
T d2fuea1         195 QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS  230 (244)
T ss_dssp             TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred             cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence            45999999999985    999999999988888864

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.80  E-value=6e-06  Score=69.00  Aligned_cols=91  Identities=8%  Similarity=0.062  Sum_probs=64.2

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccc----ccccc------ceec---CC------ChhHH
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQ----YFDHK------QIFP---GQ------KTTHF   70 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~----~fd~~------~i~~---~~------~~~~~   70 (280)
                      .+.+.||+.++++.|+++|++++|+|.+-. ...+.+++.+++..    .+...      .+..   ++      +....
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~-~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~  211 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIG-DVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA  211 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChH-HHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence            578999999999999999999999999999 89999999998742    12110      1100   11      00112


Q ss_pred             HHHHH--HhCCCCccEEEEeCCcccccccccCC
Q psy8911          71 ANLKK--ATGIEYKDMVFFDDEERNSHDVSPLG  101 (280)
Q Consensus        71 ~~~~~--~~g~~p~~~l~v~D~~~~i~aa~~~G  101 (280)
                      .....  ...-+..+++++||+..|+.+|..+.
T Consensus       212 ~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~  244 (291)
T d2bdua1         212 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA  244 (291)
T ss_dssp             HTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred             hhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence            22222  23346788999999999999987643

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.64  E-value=6.6e-05  Score=59.27  Aligned_cols=97  Identities=12%  Similarity=0.064  Sum_probs=70.9

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccc----------c----------------------
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDH----------K----------------------   59 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~----------~----------------------   59 (280)
                      .+.+.+.+.|++|+++|++++++|..+. ...+.+....++...+-.          .                      
T Consensus        19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~-~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (230)
T d1wr8a_          19 MIHEKALEAIRRAESLGIPIMLVTGNTV-QFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP   97 (230)
T ss_dssp             CBCHHHHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred             ccCHHHHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhcc
Confidence            3567789999999999999999999998 777877776665422110          0                      


Q ss_pred             -------------cee-cC-----------------------------------CChhHHHHHHHHhCCCCccEEEEeCC
Q psy8911          60 -------------QIF-PG-----------------------------------QKTTHFANLKKATGIEYKDMVFFDDE   90 (280)
Q Consensus        60 -------------~i~-~~-----------------------------------~~~~~~~~~~~~~g~~p~~~l~v~D~   90 (280)
                                   .+. ..                                   ++....+.+++++|++|+++++|||+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~  177 (230)
T d1wr8a_          98 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG  177 (230)
T ss_dssp             TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred             cccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence                         000 00                                   00111888899999999999999999


Q ss_pred             cccccccccCCCeEEEEcCC
Q psy8911          91 ERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        91 ~~~i~aa~~~G~~~i~v~~~  110 (280)
                      .+|+.+.+.+|. ++.+.+.
T Consensus       178 ~NDi~ml~~ag~-~vav~na  196 (230)
T d1wr8a_         178 ENDLDAFKVVGY-KVAVAQA  196 (230)
T ss_dssp             GGGHHHHHHSSE-EEECTTS
T ss_pred             ccHHHHHHHCCe-EEEECCC
Confidence            999999999996 4555333

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.62  E-value=5.4e-05  Score=54.64  Aligned_cols=60  Identities=17%  Similarity=-0.009  Sum_probs=44.3

Q ss_pred             eEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHH---HHHHHhhCC
Q psy8911         128 HLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILH---AKQILNLIN  204 (280)
Q Consensus       128 ~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~---~~~~l~~~g  204 (280)
                      .+.||+||||...                  .+.....|.|++.+.|+.|+++|+++.+.|.. ....   ....|++.|
T Consensus         2 ti~vDiDGTl~~~------------------~~~~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR-~~~~~~~t~~wL~~~~   62 (122)
T d2obba1           2 TIAVDFDGTIVEH------------------RYPRIGEEIPFAVETLKLLQQEKHRLILWSVR-EGELLDEAIEWCRARG   62 (122)
T ss_dssp             EEEECCBTTTBCS------------------CTTSCCCBCTTHHHHHHHHHHTTCEEEECCSC-CHHHHHHHHHHHHTTT
T ss_pred             EEEEEcCCCcCCC------------------CCCccccccHHHHHHHHHHHHCCCeEEEEecC-CCcchHHHHHHHHHcC
Confidence            3689999999642                  12223568999999999999999999999998 5443   334555555


Q ss_pred             Cc
Q psy8911         205 LN  206 (280)
Q Consensus       205 l~  206 (280)
                      +.
T Consensus        63 i~   64 (122)
T d2obba1          63 LE   64 (122)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.51  E-value=6.4e-05  Score=54.26  Aligned_cols=48  Identities=19%  Similarity=0.041  Sum_probs=38.4

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCC
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRT  190 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~  190 (280)
                      +.+.||+||||.....                .......|.+++.+.|..|++.|+++.+.|..
T Consensus         2 K~i~~DiDGTI~~~~~----------------~~y~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR   49 (124)
T d1xpja_           2 KKLIVDLDGTLTQANT----------------SDYRNVLPRLDVIEQLREYHQLGFEIVISTAR   49 (124)
T ss_dssp             CEEEECSTTTTBCCCC----------------SCGGGCCBCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred             CEEEEeCCCCeECCCC----------------CCcCccCcCHHHHHHHHHHHHCCCEEEEEecC
Confidence            4678999999974211                11234678999999999999999999999998

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.51  E-value=6.3e-05  Score=58.22  Aligned_cols=96  Identities=15%  Similarity=0.089  Sum_probs=74.9

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccccccccee---------cCCChhHHHHHHHHhCC
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIF---------PGQKTTHFANLKKATGI   79 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~---------~~~~~~~~~~~~~~~g~   79 (280)
                      ..+..+++....+..++ ++++.+++|.+.. .........++...++......         ...+.......++.+|+
T Consensus        66 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i  143 (206)
T d1rkua_          66 ATLKPLEGAVEFVDWLR-ERFQVVILSDTFY-EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS  143 (206)
T ss_dssp             TTCCCCTTHHHHHHHHH-TTSEEEEEEEEEH-HHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHH
T ss_pred             hhccccchHHHHHHHhh-cCceEEEeccCch-HHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcc
Confidence            44678899988888775 6899999999988 7888888888876665421111         11223346778889999


Q ss_pred             CCccEEEEeCCcccccccccCCCeEEE
Q psy8911          80 EYKDMVFFDDEERNSHDVSPLGVTCIL  106 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~~~G~~~i~  106 (280)
                      ++++|++|||+.+|+...+.||.....
T Consensus       144 ~~~eviaiGDg~NDi~Ml~~Ag~gIAm  170 (206)
T d1rkua_         144 LYYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             TTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             cccceEEecCCccCHHHHHhCCccEEE
Confidence            999999999999999999999997665

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.49  E-value=0.00019  Score=56.82  Aligned_cols=96  Identities=15%  Similarity=0.095  Sum_probs=69.9

Q ss_pred             ceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcccc---------cccc----------------------
Q psy8911          11 IKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQY---------FDHK----------------------   59 (280)
Q Consensus        11 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~---------fd~~----------------------   59 (280)
                      -.+.|++.+.|+.|+++|++++++|..+. ...+.+.+.+++..+         ++..                      
T Consensus        19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~-~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (225)
T d1l6ra_          19 RLISTKAIESIRSAEKKGLTVSLLSGNVI-PVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR   97 (225)
T ss_dssp             SCBCHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEcCCch-hhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence            34567899999999999999999999888 677777777765431         1000                      


Q ss_pred             ----c---------------------------------eecC-----------CChhHHHHHHHHhCCCCccEEEEeCCc
Q psy8911          60 ----Q---------------------------------IFPG-----------QKTTHFANLKKATGIEYKDMVFFDDEE   91 (280)
Q Consensus        60 ----~---------------------------------i~~~-----------~~~~~~~~~~~~~g~~p~~~l~v~D~~   91 (280)
                          .                                 +..+           ++....+.+++++|++|++|++|||+.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~  177 (225)
T d1l6ra_          98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN  177 (225)
T ss_dssp             SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred             cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence                0                                 0000           000117788999999999999999999


Q ss_pred             ccccccccCCCeEEEEc
Q psy8911          92 RNSHDVSPLGVTCILVE  108 (280)
Q Consensus        92 ~~i~aa~~~G~~~i~v~  108 (280)
                      +|+.+.+.+|. +|.+.
T Consensus       178 nD~~m~~~a~~-~vav~  193 (225)
T d1l6ra_         178 NDMPMFQLPVR-KACPA  193 (225)
T ss_dssp             GGHHHHTSSSE-EEECT
T ss_pred             chHHHHHHCCe-EEEEC
Confidence            99999999996 44453

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=0.00062  Score=52.74  Aligned_cols=90  Identities=10%  Similarity=0.009  Sum_probs=60.7

Q ss_pred             CCcceecCCHHHHHHHHHHCC-ceEEEecCCCchHH------HHHHHhhcCccccccccceecCCChhHHHHHHHHhCCC
Q psy8911           8 GAHIKYYPDVPGILKYLKQNN-CLVAAASRTSEIQG------AQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIE   80 (280)
Q Consensus         8 ~~~~~~~~g~~~~l~~L~~~g-~~~~i~Sn~~~~~~------~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~   80 (280)
                      -..++|+||+.++++.|++.| +.+.++|+.+. ..      ....|+++.. ..+....+++++|.          .+.
T Consensus        70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~-~~~~~~~~k~~Wl~~~~~-~~~~~~~~~t~~K~----------~~~  137 (195)
T d1q92a_          70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIK-MFKYCPYEKYAWVEKYFG-PDFLEQIVLTRDKT----------VVS  137 (195)
T ss_dssp             TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCS-CCSSHHHHHHHHHHHHHC-GGGGGGEEECSCST----------TSC
T ss_pred             HhhCCcccCHHHHHHHHhhccCccceEEccccc-cCcchHHHHHHHHHHhcC-CCCccEEEEccccc----------eec
Confidence            456899999999999999865 57888888764 21      1223444321 22211245555442          122


Q ss_pred             CccEEEEeCCcccccccccCCCeEEEEcCCC
Q psy8911          81 YKDMVFFDDEERNSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        81 p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~~  111 (280)
                      .  -++|||++.++.++.++|+.+|++..+.
T Consensus       138 ~--d~lIDD~p~n~~~~~~~g~~~il~~~~~  166 (195)
T d1q92a_         138 A--DLLIDDRPDITGAEPTPSWEHVLFTACH  166 (195)
T ss_dssp             C--SEEEESCSCCCCSCSSCSSEEEEECCTT
T ss_pred             C--eEEecCcHHHHHHHhcCCCeEEEECCCc
Confidence            2  2899999999999999999999995443

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=8.3e-05  Score=58.95  Aligned_cols=53  Identities=13%  Similarity=0.116  Sum_probs=39.5

Q ss_pred             ceeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhh
Q psy8911         126 SNHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNL  202 (280)
Q Consensus       126 ~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~  202 (280)
                      +++++||+||||++.                    ..  ++.+.+.+.|++|+++|+ ++++|++ +.......+..
T Consensus         3 ~kl~~fDlDGTLl~~--------------------~~--~i~~~~~~al~~l~~~g~-~~i~Tgr-~~~~~~~~~~~   55 (243)
T d2amya1           3 PALCLFDVDGTLTAP--------------------RQ--KITKEMDDFLQKLRQKIK-IGVVGGS-DFEKVQEQLGN   55 (243)
T ss_dssp             SEEEEEESBTTTBCT--------------------TS--CCCHHHHHHHHHHTTTSE-EEEECSS-CHHHHHHHHCT
T ss_pred             CEEEEEcCcCCeeCC--------------------CC--cCCHHHHHHHHHHHcCCC-EEEEcCC-ChHHhHHHHhh
Confidence            588999999999852                    11  245789999999999885 7899998 66555444444

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.33  E-value=0.00022  Score=54.33  Aligned_cols=94  Identities=9%  Similarity=0.063  Sum_probs=67.6

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccc-------------------------cceecCCC
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDH-------------------------KQIFPGQK   66 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~-------------------------~~i~~~~~   66 (280)
                      +|.|++.+.|+.|++.|+++.++|.-.. ..+..+-+.+|+...-..                         ..+++.-.
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~-~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~   98 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNK-GTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE   98 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCH-HHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence            5789999999999999999999999999 899999999998532210                         12232222


Q ss_pred             hhH---HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          67 TTH---FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        67 ~~~---~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      +..   +-..+++.|   ..+.|+||..+|..+-+.|.+-. .+..+
T Consensus        99 p~~K~~lv~~l~~~g---~~Va~vGDG~nD~~AL~~AdvGI-a~~~g  141 (168)
T d1wpga2          99 PSHKSKIVEYLQSYD---EITAMTGDGVNDAPALKKAEIGI-AMGSG  141 (168)
T ss_dssp             HHHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHHSSEEE-EETTS
T ss_pred             hhHHHHHHHHHHhcc---cceeEEecCCCCHHHHHhCCEEE-Eeccc
Confidence            222   334444444   67999999999999888887543 33333

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=97.22  E-value=0.00032  Score=55.07  Aligned_cols=41  Identities=15%  Similarity=0.099  Sum_probs=36.4

Q ss_pred             eecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911          12 KYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN   53 (280)
Q Consensus        12 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~   53 (280)
                      .+-+.+.++|++|+++|++++++|..+. ..+...++.+++.
T Consensus        21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~-~~~~~~~~~~~~~   61 (232)
T d1xvia_          21 YDWQPAAPWLTRLREANVPVILCSSKTS-AEMLYLQKTLGLQ   61 (232)
T ss_dssp             CSCCTTHHHHHHHHHTTCCEEEECSSCH-HHHHHHHHHTTCT
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCCh-hhchhHHHHhccC
Confidence            3457899999999999999999999999 7888899888875

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.17  E-value=0.00053  Score=55.87  Aligned_cols=40  Identities=5%  Similarity=0.083  Sum_probs=34.6

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN   53 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~   53 (280)
                      +-+.+.+.|++|+++|++++++|..+. ..++.+++.+++.
T Consensus        19 i~~~~~~~l~~l~~~Gi~~~i~TGR~~-~~~~~~~~~l~~~   58 (285)
T d1nrwa_          19 VSLENENALRQAQRDGIEVVVSTGRAH-FDVMSIFEPLGIK   58 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHGGGTCC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHhCCC
Confidence            346799999999999999999999988 7788888887764

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=8.9e-05  Score=57.34  Aligned_cols=89  Identities=11%  Similarity=0.081  Sum_probs=66.0

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCC----hhHHHHHHHHhCCCCccEE
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK----TTHFANLKKATGIEYKDMV   85 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~----~~~~~~~~~~~g~~p~~~l   85 (280)
                      .+...||+.++|+.+.+. |.++|.|++.. +.++.+++.+.-..+|.  .....+.    ...+.+-++.+|-+.++++
T Consensus        53 ~v~~RP~l~eFL~~l~~~-yei~I~Ta~~~-~YA~~il~~ldp~~~~~--~~~~r~~c~~~~~~~~KdL~~l~~~l~~vv  128 (181)
T d1ta0a_          53 YVLKRPHVDEFLQRMGEL-FECVLFTASLA-KYADPVADLLDKWGAFR--ARLFRESCVFHRGNYVKDLSRLGRDLRRVL  128 (181)
T ss_dssp             EEEECTTHHHHHHHHHHH-SEEEEECSSCH-HHHHHHHHHHCSSCCEE--EEECGGGSEEETTEEECCGGGSCSCGGGEE
T ss_pred             EEecCCCHHHHHHHHHhc-eEEEEEcCCcH-HHHHHHHHHhccCCcee--EEEEeeeeeecCCcccccHhhcCCCHHHeE
Confidence            356799999999999976 99999999999 99999999998777776  2222111    1113344566788999999


Q ss_pred             EEeCCcccccccccCCC
Q psy8911          86 FFDDEERNSHDVSPLGV  102 (280)
Q Consensus        86 ~v~D~~~~i~aa~~~G~  102 (280)
                      +|||++.....-...|+
T Consensus       129 ivDd~~~~~~~~~~N~I  145 (181)
T d1ta0a_         129 ILDNSPASYVFHPDNAV  145 (181)
T ss_dssp             EECSCGGGGTTCGGGBC
T ss_pred             EEcCChhhhhcCccCee
Confidence            99999876544333333

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=96.85  E-value=0.0007  Score=54.75  Aligned_cols=40  Identities=13%  Similarity=0.172  Sum_probs=33.9

Q ss_pred             ecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911          13 YYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN   53 (280)
Q Consensus        13 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~   53 (280)
                      +-|.+.++|++|+++|++++++|..+. ..+..+++.+++.
T Consensus        22 i~~~~~~al~~L~~~gi~v~i~TGR~~-~~~~~~~~~l~l~   61 (271)
T d1rkqa_          22 ISPAVKNAIAAARARGVNVVLTTGRPY-AGVHNYLKELHME   61 (271)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEECSSCG-GGTHHHHHHTTCC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHhcCc
Confidence            457789999999999999999999888 7777777776654

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.81  E-value=0.0005  Score=53.77  Aligned_cols=55  Identities=16%  Similarity=0.079  Sum_probs=38.5

Q ss_pred             eeEEEecCCCCCCcccccccCcccccCCeeEccCCceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHH
Q psy8911         127 NHLSKKLDYTLWPLHVHDLVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQIL  200 (280)
Q Consensus       127 ~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l  200 (280)
                      +++.||+||||++....                 .....+.+.+.+.|+.|++. .+++|+|++ +...++...
T Consensus         1 ~Li~~DlDGTL~~~~~~-----------------~~~~~i~~~~~~~l~~l~~~-~~v~i~TGR-~~~~l~~~~   55 (229)
T d1u02a_           1 SLIFLDYDGTLVPIIMN-----------------PEESYADAGLLSLISDLKER-FDTYIVTGR-SPEEISRFL   55 (229)
T ss_dssp             CEEEEECBTTTBCCCSC-----------------GGGCCCCHHHHHHHHHHHHH-SEEEEECSS-CHHHHHHHS
T ss_pred             CEEEEEecCCCCCCCCC-----------------hhhCCCCHHHHHHHHHHhhC-CCEEEEcCC-CHHHhhhhc
Confidence            36899999999863211                 11233557889999999875 679999999 666655433

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.19  E-value=0.014  Score=45.63  Aligned_cols=38  Identities=11%  Similarity=0.035  Sum_probs=34.0

Q ss_pred             CCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911          15 PDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN   53 (280)
Q Consensus        15 ~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~   53 (280)
                      +...+.|+.|+++|++++++|..+. ..+..+++.+++.
T Consensus        20 ~~~~~ai~~l~~~G~~~~~aTGR~~-~~~~~~~~~~~~~   57 (243)
T d1wzca1          20 DPAKPIIEELKDMGFEIIFNSSKTR-AEQEYYRKELEVE   57 (243)
T ss_dssp             GGGHHHHHHHHHTTEEEEEECSSCH-HHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHhccc
Confidence            4578999999999999999999999 8888889988775

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.65  E-value=0.0097  Score=47.14  Aligned_cols=43  Identities=12%  Similarity=0.118  Sum_probs=38.9

Q ss_pred             ceeccCCCHHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCc
Q psy8911         162 TLIKYYRGVPEILRYLKENKCLVAAASRTSEILHAKQILNLINLN  206 (280)
Q Consensus       162 ~~~~~~~g~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~  206 (280)
                      ..+++.||+.++|+.|.+. ++..|+|.+ -.+++++..+++|+.
T Consensus        78 ~~~~lvpgA~~~lk~l~~~-m~~yIvSTS-Y~qyi~al~~~~gfp  120 (308)
T d1y8aa1          78 LSAKFVPDAEKAMATLQER-WTPVVISTS-YTQYLRRTASMIGVR  120 (308)
T ss_dssp             HHCCBCTTHHHHHHHHHTT-CEEEEEEEE-EHHHHHHHHHHTTCC
T ss_pred             hceeecCCHHHHHHHHHhh-CCcEEEecc-HHHHHHHHHhhcCCC
Confidence            3578999999999999988 999999999 999999999999884

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.31  E-value=0.03  Score=44.30  Aligned_cols=42  Identities=14%  Similarity=0.172  Sum_probs=37.6

Q ss_pred             cceecCCHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCcc
Q psy8911          10 HIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWN   53 (280)
Q Consensus        10 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~   53 (280)
                      .+.+-||+.++|+.|.+. .+.+|+|.+.. ...+.+.+.+|+-
T Consensus        79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~-qyi~al~~~~gfp  120 (308)
T d1y8aa1          79 SAKFVPDAEKAMATLQER-WTPVVISTSYT-QYLRRTASMIGVR  120 (308)
T ss_dssp             HCCBCTTHHHHHHHHHTT-CEEEEEEEEEH-HHHHHHHHHTTCC
T ss_pred             ceeecCCHHHHHHHHHhh-CCcEEEeccHH-HHHHHHHhhcCCC
Confidence            468899999999999987 89999999999 8999999988873

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=94.15  E-value=0.013  Score=46.76  Aligned_cols=36  Identities=11%  Similarity=0.114  Sum_probs=32.9

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEE
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCI  105 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i  105 (280)
                      .+.+++.+|++++++++|||+.+|+...+.+|...+
T Consensus       195 l~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~va  230 (269)
T d1rlma_         195 ISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA  230 (269)
T ss_dssp             HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred             HHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEE
Confidence            888999999999999999999999999998877655

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=93.30  E-value=0.023  Score=45.15  Aligned_cols=40  Identities=10%  Similarity=0.240  Sum_probs=35.1

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      .+.+++++|++++++++|||+.+|+..-+.+|. ++.+.++
T Consensus       191 l~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~-svav~na  230 (260)
T d2rbka1         191 IDEIIRHFGIKLEETMSFGDGGNDISMLRHAAI-GVAMGQA  230 (260)
T ss_dssp             HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTS
T ss_pred             HHHHHHhccccHhheeEecCCcccHHHHHhCCe-EEEeCCC
Confidence            788999999999999999999999999999998 4556443

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.29  E-value=0.81  Score=38.19  Aligned_cols=90  Identities=19%  Similarity=0.172  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHC-CceE-EEecCCCchHHHHHHHhhcCccccccccceecCCC--hhH--------HHHHHHHhCCCCccE
Q psy8911          17 VPGILKYLKQN-NCLV-AAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQK--TTH--------FANLKKATGIEYKDM   84 (280)
Q Consensus        17 ~~~~l~~L~~~-g~~~-~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~--~~~--------~~~~~~~~g~~p~~~   84 (280)
                      +..+++.|++. ++.+ .|+|.++. +......+.+++..-++  .-+.++.  ...        +...+.+  ..|+=+
T Consensus        18 l~pli~~l~~~~~~~~~li~tG~H~-~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~--~kpD~v   92 (377)
T d1o6ca_          18 MAPLVLELKKYPEIDSYVTVTAQHR-QMLDQVLDAFHIKPDFD--LNIMKERQTLAEITSNALVRLDELFKD--IKPDIV   92 (377)
T ss_dssp             HHHHHHHGGGCTTEEEEEEECCSCG-GGTHHHHHHTTCCCSEE--CCCCCTTCCHHHHHHHHHHHHHHHHHH--HCCSEE
T ss_pred             HHHHHHHHHhCCCCCEEEEEeCCCH-HHHHHHHhhcCCCCcee--eecCCCCCCHHHHHHHHHHhhhhhhhh--ccccee
Confidence            46789999886 5555 56677776 77788888888865444  2222221  111        3444444  469999


Q ss_pred             EEEeCCcc---cccccccCCCeEEEEcCCC
Q psy8911          85 VFFDDEER---NSHDVSPLGVTCILVEDGM  111 (280)
Q Consensus        85 l~v~D~~~---~i~aa~~~G~~~i~v~~~~  111 (280)
                      +++||+..   ...+|...|+..+++..|.
T Consensus        93 ~v~GDr~e~la~a~aa~~~~Ipi~HiegG~  122 (377)
T d1o6ca_          93 LVHGDTTTTFAGSLAAFYHQIAVGHVEAGL  122 (377)
T ss_dssp             EEETTCHHHHHHHHHHHHTTCEEEEESCCC
T ss_pred             EeeecccccchhhhhhhhccceEEEEeccc
Confidence            99999865   4667777999999996653

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=93.01  E-value=0.045  Score=42.81  Aligned_cols=38  Identities=11%  Similarity=0.091  Sum_probs=33.8

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEc
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVE  108 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~  108 (280)
                      .+.+++.+|+++++|++|||+.+|+..-+.+|. .+.+.
T Consensus       167 ~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~-~vav~  204 (244)
T d1s2oa1         167 TQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVR  204 (244)
T ss_dssp             HHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECT
T ss_pred             HHHHHHhccCChhhEEEEcCCCCCHHHHhhCCc-EEEeC
Confidence            899999999999999999999999999999984 45553

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=92.59  E-value=0.11  Score=36.45  Aligned_cols=45  Identities=13%  Similarity=-0.088  Sum_probs=34.9

Q ss_pred             CCCcceecCCHHHHHHHHHHCCceEEEecCCCchHHHH---HHHhhcCc
Q psy8911           7 RGAHIKYYPDVPGILKYLKQNNCLVAAASRTSEIQGAQ---QLLDLFNW   52 (280)
Q Consensus         7 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~---~~l~~~~l   52 (280)
                      +....+|+|++.++|+.|+++|+.+.+.|..+. ...+   ..|+..++
T Consensus        16 ~~~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~-~~~~~t~~wL~~~~i   63 (122)
T d2obba1          16 YPRIGEEIPFAVETLKLLQQEKHRLILWSVREG-ELLDEAIEWCRARGL   63 (122)
T ss_dssp             TTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCH-HHHHHHHHHHHTTTC
T ss_pred             CCccccccHHHHHHHHHHHHCCCeEEEEecCCC-cchHHHHHHHHHcCC
Confidence            444567999999999999999999999999877 4433   34555554

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=92.16  E-value=0.064  Score=42.56  Aligned_cols=40  Identities=18%  Similarity=0.214  Sum_probs=34.8

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      ...+++.++++++++++|||+.+|+.....+|.. +.+.++
T Consensus       212 l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~-va~~na  251 (283)
T d2b30a1         212 INYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANA  251 (283)
T ss_dssp             HHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTC
T ss_pred             HHHHhhhcccccceEEEecCChhhHHHHHhCCcE-EEeCCC
Confidence            8899999999999999999999999999999954 445443

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=91.47  E-value=0.046  Score=43.49  Aligned_cols=40  Identities=18%  Similarity=0.358  Sum_probs=34.9

Q ss_pred             HHHHHHHhCCCCccEEEEeCCcccccccccCCCeEEEEcCC
Q psy8911          70 FANLKKATGIEYKDMVFFDDEERNSHDVSPLGVTCILVEDG  110 (280)
Q Consensus        70 ~~~~~~~~g~~p~~~l~v~D~~~~i~aa~~~G~~~i~v~~~  110 (280)
                      .+.+++.+|++++++++|||+.+|+...+.+|.. +.+.+.
T Consensus       195 i~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~s-va~~na  234 (267)
T d1nf2a_         195 LRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAMENA  234 (267)
T ss_dssp             HHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EECTTS
T ss_pred             HHHHHHhhccCcccEEEEcCCcchHHHHHhCCcE-EEeCCC
Confidence            8899999999999999999999999999999964 555433

>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator for cyanobacterial phytochrome
species: Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]

Probab=91.42  E-value=0.19  Score=36.06  Aligned_cols=100  Identities=16%  Similarity=0.189  Sum_probs=59.0

Q ss_pred             CCccEEEEeCCcccccccc----cCCC--eEEEEcCCCchhhhhcccc---ccccceeEEEecCCCCCCcccccccCccc
Q psy8911          80 EYKDMVFFDDEERNSHDVS----PLGV--TCILVEDGMTNAITLYGRS---VFIISNHLSKKLDYTLWPLHVHDLVAPFK  150 (280)
Q Consensus        80 ~p~~~l~v~D~~~~i~aa~----~~G~--~~i~v~~~~~~~~~~~~~~---~~~~~~~~~fd~DgTL~d~~~~~~~~~~~  150 (280)
                      +|..+++|||+....+..+    +.|+  .+..+.++...-...+...   .-..+++++.|+.                
T Consensus         2 ppk~ILiVdD~~~~~~~l~~~L~~~g~~~~v~~a~~g~~Al~~l~~~~~~~~~~~pdlIllD~~----------------   65 (144)
T d1i3ca_           2 PPKVILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLN----------------   65 (144)
T ss_dssp             CCEEEEEECCCHHHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSC----------------
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHhchhhhccCCCCEEEEECc----------------
Confidence            5788999999987644333    3565  4555666544333322211   1123556666642                


Q ss_pred             ccCCeeEccCCceeccCCCHHHHHHHHhh----CCcEEEEEcCCCcHHHHHHHHhhCCCccccc
Q psy8911         151 KIGQKVMDAKGTLIKYYRGVPEILRYLKE----NKCLVAAASRTSEILHAKQILNLINLNQYFS  210 (280)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~g~~~~L~~L~~----~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~  210 (280)
                                   +.- .+-.++++++|+    +++++.++|+....+. ......+|.++|+.
T Consensus        66 -------------mP~-~~G~el~~~ir~~~~~~~iPvi~lT~~~~~~~-~~~a~~~Ga~~yl~  114 (144)
T d1i3ca_          66 -------------LPK-KDGREVLAEIKQNPDLKRIPVVVLTTSHNEDD-VIASYELHVNCYLT  114 (144)
T ss_dssp             -------------CSS-SCHHHHHHHHHHCTTTTTSCEEEEESCCCHHH-HHHHHHTTCSEEEE
T ss_pred             -------------ccc-ccchHHHHHHHhCcccCCCeEEEEECCCCHHH-HHHHHHCCCCEEEE
Confidence                         111 235567888876    3578999998844444 44455679888875

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=89.01  E-value=0.2  Score=35.15  Aligned_cols=44  Identities=14%  Similarity=-0.004  Sum_probs=35.4

Q ss_pred             CcceecCCHHHHHHHHHHCCceEEEecCCCch--------------HHHHHHHhhcCc
Q psy8911           9 AHIKYYPDVPGILKYLKQNNCLVAAASRTSEI--------------QGAQQLLDLFNW   52 (280)
Q Consensus         9 ~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~--------------~~~~~~l~~~~l   52 (280)
                      ....|++++.+.|..|+++|+++.|.|.....              +.....|+..|+
T Consensus        21 ~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI   78 (124)
T d1xpja_          21 RNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQV   78 (124)
T ss_dssp             GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTC
T ss_pred             CccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999988520              335566777776

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.98  E-value=0.18  Score=38.50  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=32.1

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeC----CcCCcccccccCceEEEECC
Q psy8911         218 PKTTHFESLKKATGIEYKDMVFFDD----EERNSHDVSPLGVTCIHVKK  262 (280)
Q Consensus       218 ~k~~~~~~~~~~~~~~~~~~l~igD----~~~di~~a~~aG~~~i~v~~  262 (280)
                      .|...++.+   ++.++++++.|||    +.+|++.-+++|..++.|.+
T Consensus       185 sKg~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~  230 (243)
T d2amya1         185 DKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  230 (243)
T ss_dssp             SGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             CHHHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence            455555544   3679999999999    56999999999988888865

>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: PrpR receptor domain-like
family: PrpR receptor domain-like
domain: Propionate catabolism operon regulatory protein PrpR
species: Escherichia coli [TaxId: 562]

Probab=83.95  E-value=0.27  Score=37.10  Aligned_cols=88  Identities=16%  Similarity=0.111  Sum_probs=56.8

Q ss_pred             CHHHHHHHHHHCCceEEEecCCCchHHHHHHHhhcCccccccccceecCCChhHHHHHHHHhCCCCccEEEEeCCccccc
Q psy8911          16 DVPGILKYLKQNNCLVAAASRTSEIQGAQQLLDLFNWNQYFDHKQIFPGQKTTHFANLKKATGIEYKDMVFFDDEERNSH   95 (280)
Q Consensus        16 g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~~~l~~~~l~~~fd~~~i~~~~~~~~~~~~~~~~g~~p~~~l~v~D~~~~i~   95 (280)
                      ++...|..+++.+-++++++-.......+.+-+.+++.=.+-  .+.+.++...-..-+++.|++    ++|||... ..
T Consensus        82 Dil~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~i~~~--~~~~~~e~~~~v~~l~~~G~~----vVVG~~~~-~~  154 (186)
T d2pjua1          82 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQR--SYITEEDARGQINELKANGTE----AVVGAGLI-TD  154 (186)
T ss_dssp             HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEE--EESSHHHHHHHHHHHHHTTCC----EEEESHHH-HH
T ss_pred             HHHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCceEEE--EecCHHHHHHHHHHHHHCCCC----EEECChHH-HH
Confidence            455555556666889999987665456777777777642222  222233444444455556643    56999754 58


Q ss_pred             ccccCCCeEEEEcCC
Q psy8911          96 DVSPLGVTCILVEDG  110 (280)
Q Consensus        96 aa~~~G~~~i~v~~~  110 (280)
                      .|+++|++.+++.++
T Consensus       155 ~A~~~Gl~~vli~S~  169 (186)
T d2pjua1         155 LAEEAGMTGIFIYSA  169 (186)
T ss_dssp             HHHHTTSEEEESSCH
T ss_pred             HHHHcCCCEEEEeCH
Confidence            899999999999765

>d1k66a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpB [TaxId: 1188]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator for cyanobacterial phytochrome
species: Calothrix sp. pcc 7601, RcpB [TaxId: 1188]

Probab=83.70  E-value=1.1  Score=31.95  Aligned_cols=103  Identities=16%  Similarity=0.162  Sum_probs=60.7

Q ss_pred             hCCCCccEEEEeCCcccccccc----cCCC--eEEEEcCCCchhhhhccc------cccccceeEEEecCCCCCCccccc
Q psy8911          77 TGIEYKDMVFFDDEERNSHDVS----PLGV--TCILVEDGMTNAITLYGR------SVFIISNHLSKKLDYTLWPLHVHD  144 (280)
Q Consensus        77 ~g~~p~~~l~v~D~~~~i~aa~----~~G~--~~i~v~~~~~~~~~~~~~------~~~~~~~~~~fd~DgTL~d~~~~~  144 (280)
                      +|-.+..+++|||++.+....+    +.|+  .+..+.++...-++.+..      .....+.+++.|+.          
T Consensus         2 ~~~~~~~ILiVDD~~~~~~~l~~~L~~~g~~~~v~~a~~g~eAl~~l~~~~~~~~~~~~~~pdlillD~~----------   71 (149)
T d1k66a_           2 VGNATQPLLVVEDSDEDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLN----------   71 (149)
T ss_dssp             BSCTTSCEEEECCCHHHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSC----------
T ss_pred             CCCCCCcEEEEECCHHHHHHHHHHHHHcCCceEEEEECChHHHHHHHHhhccccccccccCCCeEEcccc----------
Confidence            3456678999999988744443    4777  455666664433332211      11124556666542          


Q ss_pred             ccCcccccCCeeEccCCceeccCCCHHHHHHHHhhC----CcEEEEEcCCCcHHHHHHHHhhCCCccccc
Q psy8911         145 LVAPFKKIGQKVMDAKGTLIKYYRGVPEILRYLKEN----KCLVAAASRTSEILHAKQILNLINLNQYFS  210 (280)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~----g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~  210 (280)
                                         + +--.-.++++.+|+.    .+++.++|+........ .....|..+|+.
T Consensus        72 -------------------m-P~~~G~el~~~ir~~~~~~~ipiI~lT~~~~~~~~~-~~~~~Ga~~~l~  120 (149)
T d1k66a_          72 -------------------L-PGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIE-ICYSYSISSYIV  120 (149)
T ss_dssp             -------------------C-SSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHH-HHHHTTCSEEEE
T ss_pred             -------------------c-cCCCcHHHHHHHHhccccCCCeEEEEeCCCCHHHHH-HHHHCCCCEEEE
Confidence                               1 123456677888753    57899999884454444 445568887764

>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: PrpR receptor domain-like
family: PrpR receptor domain-like
domain: Propionate catabolism operon regulatory protein PrpR
species: Escherichia coli [TaxId: 562]

Probab=81.87  E-value=0.53  Score=35.35  Aligned_cols=98  Identities=13%  Similarity=0.066  Sum_probs=59.2

Q ss_pred             HHHHHHHHhhCCcEEEEEcCCCcHHHHHHHHhhCCCccccccceEecCCCHHHHHHHHHHcCCCCCcEEEEeCCcCCccc
Q psy8911         170 VPEILRYLKENKCLVAAASRTSEILHAKQILNLINLNQYFSNKEIYPGPKTTHFESLKKATGIEYKDMVFFDDEERNSHD  249 (280)
Q Consensus       170 ~~~~L~~L~~~g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~igD~~~di~~  249 (280)
                      +...|..+++.+-++++++-.........+-+.++++=.+-  .+.+....+...+-+++.|++    ++|||... ...
T Consensus        83 il~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~i~~~--~~~~~~e~~~~v~~l~~~G~~----vVVG~~~~-~~~  155 (186)
T d2pjua1          83 VLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQR--SYITEEDARGQINELKANGTE----AVVGAGLI-TDL  155 (186)
T ss_dssp             HHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEE--EESSHHHHHHHHHHHHHTTCC----EEEESHHH-HHH
T ss_pred             HHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCceEEE--EecCHHHHHHHHHHHHHCCCC----EEECChHH-HHH
Confidence            44555666777889999988755556666666666652221  111112223334444555653    56999866 478


Q ss_pred             ccccCceEEEECCCCC-HHHHHHHHH
Q psy8911         250 VSPLGVTCIHVKKGMS-HAVLQKGLK  274 (280)
Q Consensus       250 a~~aG~~~i~v~~g~~-~~~~~~~~~  274 (280)
                      |+++|++.+++++|-+ ...+++|+.
T Consensus       156 A~~~Gl~~vli~S~eSv~~Ai~~A~~  181 (186)
T d2pjua1         156 AEEAGMTGIFIYSAATVRQAFSDALD  181 (186)
T ss_dssp             HHHTTSEEEESSCHHHHHHHHHHHHH
T ss_pred             HHHcCCCEEEEeCHHHHHHHHHHHHH
Confidence            9999999999976521 233445544

>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: TorCAD operon transcriptional regulator TorD, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.54  E-value=1.5  Score=29.77  Aligned_cols=95  Identities=13%  Similarity=0.098  Sum_probs=56.1

Q ss_pred             CccEEEEeCCcccccc----cccCCCeEEEEcCCCchhhhhccccccccceeEEEecCCCCCCcccccccCcccccCCee
Q psy8911          81 YKDMVFFDDEERNSHD----VSPLGVTCILVEDGMTNAITLYGRSVFIISNHLSKKLDYTLWPLHVHDLVAPFKKIGQKV  156 (280)
Q Consensus        81 p~~~l~v~D~~~~i~a----a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~fd~DgTL~d~~~~~~~~~~~~~~~~~  156 (280)
                      |..+++|||.+...+.    -...|+.+..+.++...-...+.    ..+.++..|+.  +                   
T Consensus         1 P~rILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~~~~----~~~dliilD~~--m-------------------   55 (120)
T d1zgza1           1 PHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQN----QSVDLILLDIN--L-------------------   55 (120)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHH----SCCSEEEEESC--C-------------------
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHh----cCCCEEeeehh--h-------------------
Confidence            6789999998765332    33489988877665433332221    23466777653  1                   


Q ss_pred             EccCCceeccCCCHHHHHHHHhhC-CcEEEEEcCCCcHHHHHHHHhhCCCccccc
Q psy8911         157 MDAKGTLIKYYRGVPEILRYLKEN-KCLVAAASRTSEILHAKQILNLINLNQYFS  210 (280)
Q Consensus       157 ~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~T~~~~~~~~~~~l~~~gl~~~f~  210 (280)
                              .=. +..++++.++.. ..++.++|+......... .-..|..+|+.
T Consensus        56 --------p~~-~g~~~~~~~~~~~~~piI~lt~~~~~~~~~~-a~~~Ga~dyl~  100 (120)
T d1zgza1          56 --------PDE-NGLMLTRALRERSTVGIILVTGRSDRIDRIV-GLEMGADDYVT  100 (120)
T ss_dssp             --------SSS-CHHHHHHHHHTTCCCEEEEEESSCCHHHHHH-HHHHTCSEEEE
T ss_pred             --------ccc-hhHHHHHHHhccCCCeEEEEEccCCHHHHHH-HHHCCCCEEEE
Confidence                    111 233566666543 477888888844444443 44568888875