Psyllid ID: psy8970

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
MSCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSFLKCFFRKTKQNNNTNLCGRVVKSTDSTRRCRVRIPARAEIF
ccHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHccccEEEEEccccHHHHHcccccccEEEccccccccccccccccccHHHHHHHHcccccccccccccccccccEEcccEEEccccccHHHHHHHHHHHHHccEEEEEccccccccccccHHHHHHcccEEEEEccccccccccEEEEEEcccccc
cccccHccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEcHHHcHHHcccccccccccccHHHHccccccEEEHHcccccHHHHHHHHHHHcccEEEEEEEccccHHHHcccccccEEEEcccEEEEHHHHcccEEcHHHHHHHccccccccccccccccccccEccccEEEccccccHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHcccEEEEEEccccccccccEEEEEcccccc
mscnyaeglspyenkgklglaetfdskedFDKKIKVLSEWIDKAKHVVLHtgagistsagipdfrgpngvwtlekkgikpkvnisfddavptVTHMAILELVNRGKVHYVVSQnidglhlrsgLSRKYLAELHGnmyvdqcnkcERQFvrksatnsvgqknlniscpyrgfrpcrgtlhdtildwehnlpqkdinmgdynssIADLSICLGKCLLSFLKCFFRktkqnnntnlcgrvvkstdstrrcrvriparaeif
mscnyaeglspyenkgklgLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTgagistsagipdfrgPNGVWTLekkgikpkvnisfddAVPTVTHMAILELVNRGKVHYVVSqnidglhlrSGLSRKYLAELHGNMYVDQCNKCERQFVRKsatnsvgqknlniscpyrgFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSFLKCFFRktkqnnntnlcgrvvkstdstrrcrvriparaeif
MSCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSFLKCFFRKTKQNNNTNLCGRVVKSTDSTRRCRVRIPARAEIF
****************************DFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSFLKCFFRKTKQNNNTNLCGRVVK*******************
***NY*E*LSPYENKGKL*************KKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSFLKCFFRKTKQNNNTNLCGRVVKSTDSTRRCRVRIPARAEIF
MSCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSFLKCFFRKTKQNNNTNLCGRVVKSTDSTRRCRVRIPARAEIF
*S***AEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSFLKCFFRKTKQNNNTNLCGRVVKSTDSTRRCRVRIPAR****
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MSCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSFLKCFFRKTKQNNNTNLCGRVVKSTDSTRRCRVRIPARAEIF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query258 2.2.26 [Sep-21-2011]
Q9VH08317 NAD-dependent protein dea yes N/A 0.988 0.804 0.532 1e-76
Q8N6T7355 NAD-dependent protein dea yes N/A 0.829 0.602 0.525 1e-64
P59941334 NAD-dependent protein dea yes N/A 0.829 0.640 0.516 6e-64
B8ARK7 484 NAD-dependent protein dea N/A N/A 0.817 0.435 0.462 8e-52
Q9FE17 473 NAD-dependent protein dea yes N/A 0.817 0.446 0.455 1e-51
Q8BKJ9402 NAD-dependent protein dea no N/A 0.767 0.492 0.415 5e-34
B2RZ55402 NAD-dependent protein dea no N/A 0.767 0.492 0.415 5e-34
Q0P595400 NAD-dependent protein dea no N/A 0.736 0.475 0.419 1e-33
Q9NRC8400 NAD-dependent protein dea no N/A 0.767 0.495 0.410 3e-32
Q9VAQ1 771 NAD-dependent protein dea no N/A 0.728 0.243 0.411 2e-30
>sp|Q9VH08|SIR6_DROME NAD-dependent protein deacetylase Sirt6 OS=Drosophila melanogaster GN=Sirt6 PE=2 SV=1 Back     alignment and function desciption
 Score =  286 bits (731), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 149/280 (53%), Positives = 187/280 (66%), Gaps = 25/280 (8%)

Query: 1   MSCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAG 60
           MSCNYA+GLS Y+NKG LG  E+FDS E   +K + L+E I K+ HVVLHTGAGISTSAG
Sbjct: 1   MSCNYADGLSAYDNKGILGAPESFDSDEVVAEKCQELAELIKKSGHVVLHTGAGISTSAG 60

Query: 61  IPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHL 120
           IPDFRGP GVWTLE+KG KP  N+SFD+A PT THMAI+ L+  G V YV+SQNIDGLHL
Sbjct: 61  IPDFRGPKGVWTLEEKGEKPDFNVSFDEARPTKTHMAIIALIESGYVQYVISQNIDGLHL 120

Query: 121 RSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCP----YRGFRPCR- 175
           +SGL RKYL+ELHGN+Y++QC KC RQFV  SA  +VGQK+L  +C      +G R CR 
Sbjct: 121 KSGLDRKYLSELHGNIYIEQCKKCRRQFVSPSAVETVGQKSLQRACKSSMDSKG-RSCRS 179

Query: 176 GTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLG----------------KCLLSFLK 219
           G L+D +LDWEH+LP+ D+ MG  +S++ADL+I LG                KC   F+ 
Sbjct: 180 GILYDNVLDWEHDLPENDLEMGVMHSTVADLNIALGTTLQIVPSGDLPLKNLKCGGKFVI 239

Query: 220 CFFRKTKQNNNTNLCGRVVKSTDSTRRCR---VRIPARAE 256
           C  + TK +   NL          ++ C+   V IP  +E
Sbjct: 240 CNLQPTKHDKKANLIISSYVDVVLSKVCKLLGVEIPEYSE 279
NAD-dependent protein deacetylase (By similarity). May be involved in the regulation of life span.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q8N6T7|SIR6_HUMAN NAD-dependent protein deacetylase sirtuin-6 OS=Homo sapiens GN=SIRT6 PE=1 SV=2 Back     alignment and function description
>sp|P59941|SIR6_MOUSE NAD-dependent protein deacetylase sirtuin-6 OS=Mus musculus GN=Sirt6 PE=1 SV=1 Back     alignment and function description
>sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FE17|SIR1_ARATH NAD-dependent protein deacetylase SRT1 OS=Arabidopsis thaliana GN=SRT1 PE=2 SV=1 Back     alignment and function description
>sp|Q8BKJ9|SIR7_MOUSE NAD-dependent protein deacetylase sirtuin-7 OS=Mus musculus GN=Sirt7 PE=1 SV=2 Back     alignment and function description
>sp|B2RZ55|SIR7_RAT NAD-dependent protein deacetylase sirtuin-7 OS=Rattus norvegicus GN=Sirt7 PE=2 SV=1 Back     alignment and function description
>sp|Q0P595|SIR7_BOVIN NAD-dependent protein deacetylase sirtuin-7 OS=Bos taurus GN=SIRT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9NRC8|SIR7_HUMAN NAD-dependent protein deacetylase sirtuin-7 OS=Homo sapiens GN=SIRT7 PE=1 SV=1 Back     alignment and function description
>sp|Q9VAQ1|SIR7_DROME NAD-dependent protein deacetylase Sirt7 OS=Drosophila melanogaster GN=Sirt7 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query258
242016288 853 chromatin regulatory protein sir2, putat 0.829 0.250 0.657 1e-83
91077210338 PREDICTED: similar to chromatin regulato 0.825 0.630 0.680 4e-82
321463370 405 hypothetical protein DAPPUDRAFT_324354 [ 0.829 0.528 0.643 2e-81
350402530 407 PREDICTED: NAD-dependent deacetylase sir 0.829 0.525 0.648 6e-81
340711968 407 PREDICTED: NAD-dependent deacetylase sir 0.829 0.525 0.648 7e-81
380030213 407 PREDICTED: NAD-dependent deacetylase sir 0.829 0.525 0.648 9e-81
66513399 407 PREDICTED: NAD-dependent deacetylase sir 0.829 0.525 0.648 1e-80
156546904 403 PREDICTED: NAD-dependent deacetylase sir 0.829 0.531 0.643 1e-80
383859069 406 PREDICTED: NAD-dependent deacetylase sir 0.829 0.527 0.648 1e-80
307211057 407 Mono-ADP-ribosyltransferase sirtuin-6 [H 0.829 0.525 0.638 2e-80
>gi|242016288|ref|XP_002428761.1| chromatin regulatory protein sir2, putative [Pediculus humanus corporis] gi|212513446|gb|EEB16023.1| chromatin regulatory protein sir2, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 142/216 (65%), Positives = 173/216 (80%), Gaps = 2/216 (0%)

Query: 1   MSCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAG 60
           MSCNYA+GLSPY +KG+LGL E FD K     K+ +L++WI++A HVV+HTGAGISTSAG
Sbjct: 1   MSCNYADGLSPYHDKGQLGLEEKFDIKSVVSAKVSLLAKWINEANHVVIHTGAGISTSAG 60

Query: 61  IPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHL 120
           IPDFRGP GVWTL+ KG KP ++  F++A+PTVTHMAI++LV + KV YVVSQNIDGLHL
Sbjct: 61  IPDFRGPRGVWTLQAKGEKPDLSKDFNEAIPTVTHMAIMKLVEKQKVKYVVSQNIDGLHL 120

Query: 121 RSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPYRGF--RPCRGTL 178
           RS L RKYL+ELHGNM+ +QCN C RQFVR S   +VGQK++N +CP      RPCRG L
Sbjct: 121 RSNLRRKYLSELHGNMFTEQCNSCNRQFVRSSPVPTVGQKSINKNCPATKANGRPCRGRL 180

Query: 179 HDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCL 214
           HDTILDWEHNLP+ D+ M DY+S +ADLSICLG  +
Sbjct: 181 HDTILDWEHNLPENDLGMADYHSCLADLSICLGTTM 216

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|91077210|ref|XP_973096.1| PREDICTED: similar to chromatin regulatory protein sir2 [Tribolium castaneum] gi|270002055|gb|EEZ98502.1| hypothetical protein TcasGA2_TC001003 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|321463370|gb|EFX74386.1| hypothetical protein DAPPUDRAFT_324354 [Daphnia pulex] Back     alignment and taxonomy information
>gi|350402530|ref|XP_003486518.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340711968|ref|XP_003394537.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|380030213|ref|XP_003698748.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Apis florea] Back     alignment and taxonomy information
>gi|66513399|ref|XP_396298.2| PREDICTED: NAD-dependent deacetylase sirtuin-6 [Apis mellifera] Back     alignment and taxonomy information
>gi|156546904|ref|XP_001599869.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like isoform 1 [Nasonia vitripennis] gi|345483869|ref|XP_003424899.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|383859069|ref|XP_003705020.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|307211057|gb|EFN87309.1| Mono-ADP-ribosyltransferase sirtuin-6 [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query258
FB|FBgn0037802317 Sirt6 "Sirt6" [Drosophila mela 0.825 0.671 0.625 3.3e-70
ZFIN|ZDB-GENE-031007-2354 sirt6 "sirtuin (silent mating 0.829 0.604 0.520 3.9e-60
UNIPROTKB|A5D7K6359 SIRT6 "SIRT6 protein" [Bos tau 0.829 0.596 0.529 1e-59
UNIPROTKB|F1P0C4357 SIRT6 "Uncharacterized protein 0.829 0.599 0.529 2.7e-59
UNIPROTKB|E2QXD9361 SIRT6 "Uncharacterized protein 0.829 0.592 0.525 7.3e-59
UNIPROTKB|Q8N6T7355 SIRT6 "NAD-dependent protein d 0.829 0.602 0.525 1.2e-58
MGI|MGI:1354161334 Sirt6 "sirtuin 6 (silent matin 0.829 0.640 0.516 3.2e-58
RGD|1305216330 Sirt6 "sirtuin 6" [Rattus norv 0.829 0.648 0.520 5.1e-58
UNIPROTKB|F1S7P1359 SIRT6 "Uncharacterized protein 0.829 0.596 0.493 4.3e-54
UNIPROTKB|F1S7M5328 SIRT6 "Uncharacterized protein 0.829 0.652 0.488 8.9e-54
FB|FBgn0037802 Sirt6 "Sirt6" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 137/219 (62%), Positives = 168/219 (76%)

Query:     1 MSCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAG 60
             MSCNYA+GLS Y+NKG LG  E+FDS E   +K + L+E I K+ HVVLHTGAGISTSAG
Sbjct:     1 MSCNYADGLSAYDNKGILGAPESFDSDEVVAEKCQELAELIKKSGHVVLHTGAGISTSAG 60

Query:    61 IPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHL 120
             IPDFRGP GVWTLE+KG KP  N+SFD+A PT THMAI+ L+  G V YV+SQNIDGLHL
Sbjct:    61 IPDFRGPKGVWTLEEKGEKPDFNVSFDEARPTKTHMAIIALIESGYVQYVISQNIDGLHL 120

Query:   121 RSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPY----RGFRPCR- 175
             +SGL RKYL+ELHGN+Y++QC KC RQFV  SA  +VGQK+L  +C      +G R CR 
Sbjct:   121 KSGLDRKYLSELHGNIYIEQCKKCRRQFVSPSAVETVGQKSLQRACKSSMDSKG-RSCRS 179

Query:   176 GTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCL 214
             G L+D +LDWEH+LP+ D+ MG  +S++ADL+I LG  L
Sbjct:   180 GILYDNVLDWEHDLPENDLEMGVMHSTVADLNIALGTTL 218
GO:0070403 "NAD+ binding" evidence=IEA
GO:0008340 "determination of adult lifespan" evidence=IMP
ZFIN|ZDB-GENE-031007-2 sirt6 "sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A5D7K6 SIRT6 "SIRT6 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P0C4 SIRT6 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXD9 SIRT6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8N6T7 SIRT6 "NAD-dependent protein deacetylase sirtuin-6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1354161 Sirt6 "sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305216 Sirt6 "sirtuin 6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1S7P1 SIRT6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1S7M5 SIRT6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P59941SIR6_MOUSE3, ., 5, ., 1, ., -0.51610.82940.6407yesN/A
Q95Q89SIR24_CAEEL3, ., 5, ., 1, ., -0.35380.72860.6438yesN/A
Q8ZT00NPD2_PYRAE3, ., 5, ., 1, ., -0.26270.80230.8313yesN/A
B5YJW3NPD_THEYD3, ., 5, ., 1, ., -0.31680.68990.6953yesN/A
O58669NPD_PYRHO3, ., 5, ., 1, ., -0.30800.66270.6867yesN/A
Q5JG47NPD_PYRKO3, ., 5, ., 1, ., -0.30890.63170.6342yesN/A
Q9VH08SIR6_DROME3, ., 5, ., 1, ., -0.53210.98830.8044yesN/A
Q73KE1NPD_TREDE3, ., 5, ., 1, ., -0.30950.68600.7051yesN/A
C6A243NPD_THESM3, ., 5, ., 1, ., -0.26380.80230.8117yesN/A
Q974M6NPD_SULTO3, ., 5, ., 1, ., -0.32460.63170.652yesN/A
Q8N6T7SIR6_HUMAN3, ., 5, ., 1, ., -0.52530.82940.6028yesN/A
Q97VX5NPD_SULSO3, ., 5, ., 1, ., -0.29110.80230.8380yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.10.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query258
cd01410206 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic 3e-71
cd01407218 cd01407, SIR2-fam, SIR2 family of proteins include 3e-47
cd00296222 cd00296, SIR2, SIR2 superfamily of proteins includ 5e-41
COG0846250 COG0846, SIR2, NAD-dependent protein deacetylases, 6e-29
PRK00481242 PRK00481, PRK00481, NAD-dependent deacetylase; Pro 2e-27
cd01413222 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryo 5e-27
PRK14138244 PRK14138, PRK14138, NAD-dependent deacetylase; Pro 2e-26
cd01411225 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic 2e-26
pfam02146177 pfam02146, SIR2, Sir2 family 2e-22
cd01409260 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic 3e-22
cd01412224 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryoti 6e-18
cd01408235 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) w 1e-16
PRK05333285 PRK05333, PRK05333, NAD-dependent deacetylase; Pro 4e-16
PTZ00409271 PTZ00409, PTZ00409, Sir2 (Silent Information Regul 2e-14
PTZ00408242 PTZ00408, PTZ00408, NAD-dependent deacetylase; Pro 7e-12
PTZ00410349 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisiona 7e-10
>gnl|CDD|238701 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information 
 Score =  216 bits (553), Expect = 3e-71
 Identities = 81/171 (47%), Positives = 107/171 (62%), Gaps = 6/171 (3%)

Query: 45  KHVVLHTGAGISTSAGIPDFRGPNGVWTLEK-KGIKPKVNISFDDAVPTVTHMAILELVN 103
           KH+V+ TGAGISTSAGIPDFRGPNGVWTL      + + +  F  A PT+THMA++EL  
Sbjct: 1   KHLVVFTGAGISTSAGIPDFRGPNGVWTLLPEDKGRRRFSWRFRRAEPTLTHMALVELER 60

Query: 104 RGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLN 163
            G + +V+SQN+DGLHLRSGL R+ L+ELHGNM+++ C  C  ++VR     + G K   
Sbjct: 61  AGLLKFVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCGPEYVRDDVVETRGDKETG 120

Query: 164 ISCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCL 214
             C       C G L DTI+D+   LP ++       +  ADL +CLG  L
Sbjct: 121 RRCH-----ACGGILKDTIVDFGERLPPENWMGAAAAACRADLFLCLGTSL 166

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. Length = 206
>gnl|CDD|238698 cd01407, SIR2-fam, SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>gnl|CDD|238184 cd00296, SIR2, SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>gnl|CDD|223915 COG0846, SIR2, NAD-dependent protein deacetylases, SIR2 family [Transcription] Back     alignment and domain information
>gnl|CDD|234777 PRK00481, PRK00481, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|238704 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|172627 PRK14138, PRK14138, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|238702 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|216902 pfam02146, SIR2, Sir2 family Back     alignment and domain information
>gnl|CDD|238700 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|238703 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>gnl|CDD|238699 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|235415 PRK05333, PRK05333, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|173599 PTZ00409, PTZ00409, Sir2 (Silent Information Regulator) protein; Provisional Back     alignment and domain information
>gnl|CDD|240405 PTZ00408, PTZ00408, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|185600 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 258
KOG1905|consensus353 100.0
cd01410206 SIRT7 SIRT7: Eukaryotic and prokaryotic group (cla 100.0
cd01409260 SIRT4 SIRT4: Eukaryotic and prokaryotic group (cla 100.0
PTZ00409271 Sir2 (Silent Information Regulator) protein; Provi 100.0
PRK14138244 NAD-dependent deacetylase; Provisional 100.0
cd01408235 SIRT1 SIRT1: Eukaryotic group (class1) which inclu 100.0
COG0846250 SIR2 NAD-dependent protein deacetylases, SIR2 fami 100.0
cd01413222 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group 100.0
PRK05333285 NAD-dependent deacetylase; Provisional 100.0
cd01411225 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homo 100.0
PRK00481242 NAD-dependent deacetylase; Provisional 100.0
PTZ00410349 NAD-dependent SIR2; Provisional 100.0
cd01407218 SIR2-fam SIR2 family of proteins includes silent i 100.0
PTZ00408242 NAD-dependent deacetylase; Provisional 100.0
cd01412224 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaea 100.0
KOG2683|consensus305 100.0
cd00296222 SIR2 SIR2 superfamily of proteins includes silent 100.0
PF02146178 SIR2: Sir2 family; InterPro: IPR003000 These seque 100.0
KOG2684|consensus412 100.0
KOG2682|consensus314 100.0
cd01406242 SIR2-like Sir2-like: Prokaryotic group of uncharac 99.02
smart0083441 CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C 81.24
>KOG1905|consensus Back     alignment and domain information 
Probab=100.00  E-value=7.6e-66  Score=454.10  Aligned_cols=255  Identities=45%  Similarity=0.731  Sum_probs=242.1

Q ss_pred             CchhhcccCCCCCCCCCCCCCCcCCChHHHHHHHHHHHHHHHhCCcEEEEeCCccCccCCCCCCCCCCCCccccccCCCC
Q psy8970           1 MSCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKP   80 (258)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~la~~i~~a~~ivv~tGAGiS~~SGIPdFR~~~Glw~~~~~~~~p   80 (258)
                      ||+||+.++|.|.++|+.|.||.+|+++.++.++++||+++++|+++||+|||||||+||||||||++|+|++++.+.+ 
T Consensus        12 ~~v~~~~~~s~~~~~~k~~~~e~~D~~e~l~~kv~elA~li~~sk~lvv~tGAGISTaa~IPDfRGp~GVWTL~~kG~~-   90 (353)
T KOG1905|consen   12 MSVNYAHGLSIRLEKGKQGRPEEFDPPEVLRTKVEELAQLIQQSKHLVVYTGAGISTAAGIPDFRGPQGVWTLQQKGKD-   90 (353)
T ss_pred             hhhhhhcccchhhhcccccCccccCCHHHHHHHHHHHHHHHhhCCcEEEEeCCccccccCCCCccCCCceeehhhcCcc-
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999999888877 


Q ss_pred             cccccccCCCCCHHHHHHHHHHHcCCCcEEEeccCcchHhhcCCCcccccccccceeecccCCcccccchhhhhhhcccc
Q psy8970          81 KVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQK  160 (258)
Q Consensus        81 ~~~~~f~~~~Pn~~H~~L~~L~~~g~~~~viTQNIDgLh~kAG~~~~~v~elHGsl~~~~C~~C~~~~~~~~~~~~~~~~  160 (258)
                      .+...|..|.|+.+|++|.+|++.|.+++||||||||||.|+|+|.+++.|||||++-..|.+|..+|.++..+..++..
T Consensus        91 ~~~~df~~ArPt~THmai~~Lhr~gll~~viSQNvDGLhlrsGlPr~~LsElHGNmfiEvC~sC~~~yvr~~~v~t~gl~  170 (353)
T KOG1905|consen   91 KFGVDFSEARPTVTHMAIVALHRAGLLKHVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCRPEYVRDRVVDTVGLK  170 (353)
T ss_pred             ccCCchhhcCCcchHHHHHHHHHcchhhhhhhccccchhhccCCCHHHHHHHhcchHHHHhhhhcccceehhheeecccc
Confidence            67788999999999999999999999999999999999999999999999999999999999999999999888888888


Q ss_pred             CCCCCCCCCC---CCCCCCeecceEEEcCCCCChHHHHHHHHHhccCCEEEEEecCceeE----------------EEEc
Q psy8970         161 NLNISCPYRG---FRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSF----------------LKCF  221 (258)
Q Consensus       161 ~~~~~C~~~~---c~~Cgg~lrP~Vv~fgE~~~~~~~~~a~~~~~~~Dl~lvvGTSl~V~----------------v~iN  221 (258)
                      .....|....   |+.|.|.|+..++.|...+|.+.|+.|.++.+.||++|++||||+|.                ++||
T Consensus       171 at~R~ct~~k~~~~rscrg~l~d~~ldwe~~lpln~l~~a~~a~~~Ad~~lcLGTSLqI~p~g~lpl~~~k~g~K~~ivN  250 (353)
T KOG1905|consen  171 ATGRHCTGRKCRKCRSCRGTLRDFGLDWEDELPLNDLDRATKAAKRADLILCLGTSLQILPKGNLPLKMKKRGGKIVIVN  250 (353)
T ss_pred             cccccccccccccccccccchhhccccccccCCchhhHHHHHHhhhcceEEEeccceEeeeCCCcchhHhccCceEEEEe
Confidence            7777887654   55666888999999999999999999999999999999999999998                9999


Q ss_pred             CCCCCCCCcccEEEEeeccCcccccc---ccccCcccc
Q psy8970         222 FRKTKQNNNTNLCGRVVKSTDSTRRC---RVRIPARAE  256 (258)
Q Consensus       222 ~~~t~~d~~adl~i~~~~~~~~~~~~---~~~~~~~~~  256 (258)
                      +|+|+.|+.|+++|++.+|..+...|   ++.+|.|-.
T Consensus       251 lQ~T~hDk~A~l~Ihg~vd~Vm~~lm~~LgveIp~y~~  288 (353)
T KOG1905|consen  251 LQWTPHDKIANLKIHGKVDLVMASLMELLGVEIPAYDR  288 (353)
T ss_pred             CccCcccchhheeehhhHHHHHHHHHHHhCCCCCcccC
Confidence            99999999999999999999888888   899999964

>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd01409 SIRT4 SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PTZ00409 Sir2 (Silent Information Regulator) protein; Provisional Back     alignment and domain information
>PRK14138 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>COG0846 SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] Back     alignment and domain information
>cd01413 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PRK05333 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01411 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PRK00481 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>PTZ00410 NAD-dependent SIR2; Provisional Back     alignment and domain information
>cd01407 SIR2-fam SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>PTZ00408 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01412 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>KOG2683|consensus Back     alignment and domain information
>cd00296 SIR2 SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>PF02146 SIR2: Sir2 family; InterPro: IPR003000 These sequences represent the Sirtuin (Sir2-related) family of NAD+-dependent deacetylases Back     alignment and domain information
>KOG2684|consensus Back     alignment and domain information
>KOG2682|consensus Back     alignment and domain information
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>smart00834 CxxC_CXXC_SSSS Putative regulatory protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query258
3pki_A355 Human Sirt6 Crystal Structure In Complex With Adp R 5e-65
3k35_A318 Crystal Structure Of Human Sirt6 Length = 318 6e-65
1yc5_A246 Sir2-P53 Peptide-Nicotinamide Length = 246 1e-19
2h4h_A246 Sir2 H116y Mutant-P53 Peptide-Nad Length = 246 5e-19
2h59_A246 Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp 1e-18
1ma3_A253 Structure Of A Sir2 Enzyme Bound To An Acetylated P 8e-15
4fvt_A274 Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad L 2e-12
3glr_A285 Crystal Structure Of Human Sirt3 With Acetyl-Lysine 2e-12
4hd8_A284 Crystal Structure Of Human Sirt3 In Complex With Fl 2e-12
1m2n_A249 Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acety 2e-11
2b4y_A271 Crystal Structure Of Human Sirtuin Homolog 5 Length 6e-11
2nyr_A271 Crystal Structure Of Human Sirtuin Homolog 5 In Com 7e-11
1m2k_A249 Sir2 Homologue F159a Mutant-Adp Ribose Complex Leng 1e-10
1m2g_A249 Sir2 Homologue-Adp Ribose Complex Length = 249 1e-10
1ici_A256 Crystal Structure Of A Sir2 Homolog-Nad Complex Len 1e-10
3rig_A273 Sirt5 Is An Nad-Dependent Protein Lysine Demalonyla 2e-10
4g1c_A267 Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length 2e-10
4hda_A275 Crystal Structure Of Human Sirt5 In Complex With Fl 2e-10
1m2h_A249 Sir2 Homologue S24a Mutant-adp Ribose Complex Lengt 2e-10
3u31_A290 Plasmodium Falciparum Sir2a Preferentially Hydrolyz 3e-10
1m2j_A249 Sir2 Homologue H80n Mutant-Adp Ribose Complex Lengt 7e-10
3jwp_A265 Crystal Structure Of Plasmodium Falciparum Sir2a (P 1e-09
1j8f_A323 Human Sirt2 Histone Deacetylase Length = 323 3e-09
1j8f_C323 Human Sirt2 Histone Deacetylase Length = 323 3e-09
2hjh_A354 Crystal Structure Of The Sir2 Deacetylase Length = 2e-07
4i5i_A287 Crystal Structure Of The Sirt1 Catalytic Domain Bou 2e-07
4iao_A492 Crystal Structure Of Sir2 C543s Mutant In Complex W 3e-07
1szc_A297 Structural Basis For Nicotinamide Cleavage And Adp- 2e-05
1q1a_A289 Structure Of The Yeast Hst2 Protein Deacetylase In 2e-05
2od7_A308 Crystal Structure Of Yhst2 Bound To The Intermediat 2e-05
1q17_A300 Structure Of The Yeast Hst2 Protein Deacetylase In 2e-05
1q14_A361 Structure And Autoregulation Of The Yeast Hst2 Homo 2e-05
1s5p_A235 Structure And Substrate Binding Properties Of Cobb, 3e-05
2od2_A308 Crystal Structure Of Yhst2 I117f Mutant Bound To Ca 5e-05
>pdb|3PKI|A Chain A, Human Sirt6 Crystal Structure In Complex With Adp Ribose Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  244 bits (622), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 113/216 (52%), Positives = 152/216 (70%), Gaps = 3/216 (1%)
Query: 2   SCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGI 61
           S NYA GLSPY +KGK GL E FD  E+ ++K+  L+  + ++  VV HTGAGIST++GI
Sbjct: 2   SVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGI 61
Query: 62  PDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLR 121
           PDFRGP+GVWT+E++G+ PK + +F+ A PT THMA+++L   G + ++VSQN+DGLH+R
Sbjct: 62  PDFRGPHGVWTMEERGLAPKFDTTFESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVR 121
Query: 122 SGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPY---RGFRPCRGTL 178
           SG  R  LAELHGNM+V++C KC+ Q+VR +   ++G K     C     RG R CRG L
Sbjct: 122 SGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGEL 181
Query: 179 HDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCL 214
            DTILDWE +LP +D+ + D  S  ADLSI LG  L
Sbjct: 182 RDTILDWEDSLPDRDLALADEASRNADLSITLGTSL 217
>pdb|3K35|A Chain A, Crystal Structure Of Human Sirt6 Length = 318 Back     alignment and structure
>pdb|1YC5|A Chain A, Sir2-P53 Peptide-Nicotinamide Length = 246 Back     alignment and structure
>pdb|2H4H|A Chain A, Sir2 H116y Mutant-P53 Peptide-Nad Length = 246 Back     alignment and structure
>pdb|2H59|A Chain A, Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp Ribose Length = 246 Back     alignment and structure
>pdb|1MA3|A Chain A, Structure Of A Sir2 Enzyme Bound To An Acetylated P53 Peptide Length = 253 Back     alignment and structure
>pdb|4FVT|A Chain A, Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad Length = 274 Back     alignment and structure
>pdb|3GLR|A Chain A, Crystal Structure Of Human Sirt3 With Acetyl-Lysine Acecs2 Peptide Length = 285 Back     alignment and structure
>pdb|4HD8|A Chain A, Crystal Structure Of Human Sirt3 In Complex With Fluor-de-lys Peptide And Piceatannol Length = 284 Back     alignment and structure
>pdb|1M2N|A Chain A, Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acetyl Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|2B4Y|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 Length = 271 Back     alignment and structure
>pdb|2NYR|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 In Complex With Suramin Length = 271 Back     alignment and structure
>pdb|1M2K|A Chain A, Sir2 Homologue F159a Mutant-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2G|A Chain A, Sir2 Homologue-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1ICI|A Chain A, Crystal Structure Of A Sir2 Homolog-Nad Complex Length = 256 Back     alignment and structure
>pdb|3RIG|A Chain A, Sirt5 Is An Nad-Dependent Protein Lysine Demalonylase And Desuccinylase Length = 273 Back     alignment and structure
>pdb|4G1C|A Chain A, Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length = 267 Back     alignment and structure
>pdb|4HDA|A Chain A, Crystal Structure Of Human Sirt5 In Complex With Fluor-de-lys Peptide And Resveratrol Length = 275 Back     alignment and structure
>pdb|1M2H|A Chain A, Sir2 Homologue S24a Mutant-adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|3U31|A Chain A, Plasmodium Falciparum Sir2a Preferentially Hydrolyzes Medium And Long Chain Fatty Acyl Lysine Length = 290 Back     alignment and structure
>pdb|1M2J|A Chain A, Sir2 Homologue H80n Mutant-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|3JWP|A Chain A, Crystal Structure Of Plasmodium Falciparum Sir2a (Pf13_0152) In Complex With Amp Length = 265 Back     alignment and structure
>pdb|1J8F|A Chain A, Human Sirt2 Histone Deacetylase Length = 323 Back     alignment and structure
>pdb|1J8F|C Chain C, Human Sirt2 Histone Deacetylase Length = 323 Back     alignment and structure
>pdb|2HJH|A Chain A, Crystal Structure Of The Sir2 Deacetylase Length = 354 Back     alignment and structure
>pdb|4I5I|A Chain A, Crystal Structure Of The Sirt1 Catalytic Domain Bound To Nad And An Ex527 Analog Length = 287 Back     alignment and structure
>pdb|4IAO|A Chain A, Crystal Structure Of Sir2 C543s Mutant In Complex With Sid Domain Of Sir4 Length = 492 Back     alignment and structure
>pdb|1SZC|A Chain A, Structural Basis For Nicotinamide Cleavage And Adp-Ribose Transfer By Nad+-Dependent Sir2 HistonePROTEIN DEACETYLASES Length = 297 Back     alignment and structure
>pdb|1Q1A|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 289 Back     alignment and structure
>pdb|2OD7|A Chain A, Crystal Structure Of Yhst2 Bound To The Intermediate Analogue Adp-Hpd, And And Aceylated H4 Peptide Length = 308 Back     alignment and structure
>pdb|1Q17|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 300 Back     alignment and structure
>pdb|1Q14|A Chain A, Structure And Autoregulation Of The Yeast Hst2 Homolog Of Sir2 Length = 361 Back     alignment and structure
>pdb|1S5P|A Chain A, Structure And Substrate Binding Properties Of Cobb, A Sir2 Homolog Protein Deacetylase From Eschericia Coli Length = 235 Back     alignment and structure
>pdb|2OD2|A Chain A, Crystal Structure Of Yhst2 I117f Mutant Bound To Carba-Nad+ And An Acetylated H4 Peptide Length = 308 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query258
3pki_A355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 1e-92
3k35_A318 NAD-dependent deacetylase sirtuin-6; rossmann fold 1e-92
1yc5_A246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 1e-48
2hjh_A354 NAD-dependent histone deacetylase SIR2; protein, s 8e-37
1q1a_A289 HST2 protein; ternary complex, histone deacetylase 9e-37
3glr_A285 NAD-dependent deacetylase sirtuin-3, mitochondria; 2e-34
1q14_A361 HST2 protein; histone deacetylase, hydrolase; 2.50 2e-33
3u31_A290 SIR2A, transcriptional regulatory protein SIR2 hom 2e-33
1ma3_A253 SIR2-AF2, transcriptional regulatory protein, SIR2 2e-32
1m2k_A249 Silent information regulator 2; protein-ligand com 8e-31
3riy_A273 NAD-dependent deacetylase sirtuin-5; desuccinylase 5e-28
1j8f_A323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 2e-26
1s5p_A235 NAD-dependent deacetylase; protein deacetylase, SI 3e-25
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Length = 355 Back     alignment and structure
 Score =  276 bits (707), Expect = 1e-92
 Identities = 112/213 (52%), Positives = 151/213 (70%), Gaps = 3/213 (1%)

Query: 2   SCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGI 61
           S NYA GLSPY +KGK GL E FD  E+ ++K+  L+  + ++  VV HTGAGIST++GI
Sbjct: 2   SVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGI 61

Query: 62  PDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLR 121
           PDFRGP+GVWT+E++G+ PK + +F+ A PT THMA+++L   G + ++VSQN+DGLH+R
Sbjct: 62  PDFRGPHGVWTMEERGLAPKFDTTFESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVR 121

Query: 122 SGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPY---RGFRPCRGTL 178
           SG  R  LAELHGNM+V++C KC+ Q+VR +   ++G K     C     RG R CRG L
Sbjct: 122 SGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGEL 181

Query: 179 HDTILDWEHNLPQKDINMGDYNSSIADLSICLG 211
            DTILDWE +LP +D+ + D  S  ADLSI LG
Sbjct: 182 RDTILDWEDSLPDRDLALADEASRNADLSITLG 214
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Length = 318 Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Length = 246 Back     alignment and structure
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Length = 354 Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Length = 289 Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A Length = 285 Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Length = 361 Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Length = 290 Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Length = 253 Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Length = 249 Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} PDB: 3rig_A* 2b4y_A* 2nyr_A* Length = 273 Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Length = 323 Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Length = 235 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query258
3k35_A318 NAD-dependent deacetylase sirtuin-6; rossmann fold 100.0
3pki_A355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 100.0
3u31_A290 SIR2A, transcriptional regulatory protein SIR2 hom 100.0
1yc5_A246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 100.0
3glr_A285 NAD-dependent deacetylase sirtuin-3, mitochondria; 100.0
1ma3_A253 SIR2-AF2, transcriptional regulatory protein, SIR2 100.0
3riy_A273 NAD-dependent deacetylase sirtuin-5; desuccinylase 100.0
4iao_A492 NAD-dependent histone deacetylase SIR2; protein co 100.0
2hjh_A354 NAD-dependent histone deacetylase SIR2; protein, s 100.0
1q1a_A289 HST2 protein; ternary complex, histone deacetylase 100.0
1m2k_A249 Silent information regulator 2; protein-ligand com 100.0
1q14_A361 HST2 protein; histone deacetylase, hydrolase; 2.50 100.0
1j8f_A323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 100.0
1s5p_A235 NAD-dependent deacetylase; protein deacetylase, SI 100.0
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.6e-78  Score=551.40  Aligned_cols=254  Identities=48%  Similarity=0.829  Sum_probs=215.5

Q ss_pred             chhhcccCCCCCCCCCCCCCCcCCChHHHHHHHHHHHHHHHhCCcEEEEeCCccCccCCCCCCCCCCCCccccccCCCCc
Q psy8970           2 SCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPK   81 (258)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~la~~i~~a~~ivv~tGAGiS~~SGIPdFR~~~Glw~~~~~~~~p~   81 (258)
                      |+|||++||+|+|||+||.||++|+++++++++++|+++|++|++|||+|||||||+|||||||+++|+|+..++..+|+
T Consensus         2 s~~ya~~l~~~~~~g~~~~~e~~d~p~~l~~~i~~l~~~i~~a~~ivvlTGAGISteSGIPdFR~~~Glw~~~~~~~~p~   81 (318)
T 3k35_A            2 SVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGLAPK   81 (318)
T ss_dssp             -------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCSCEEEEECGGGSGGGTCCCSSSTTCHHHHHTTTCCCC
T ss_pred             ccchhhhCCcccccCccCCccccCCHHHHHHHHHHHHHHHHhCCCEEEEeccccChhhCCCccccCCCcchhhhccCCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999877777899


Q ss_pred             ccccccCCCCCHHHHHHHHHHHcCCCcEEEeccCcchHhhcCCCcccccccccceeecccCCcccccchhhhhhhccccC
Q psy8970          82 VNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKN  161 (258)
Q Consensus        82 ~~~~f~~~~Pn~~H~~L~~L~~~g~~~~viTQNIDgLh~kAG~~~~~v~elHGsl~~~~C~~C~~~~~~~~~~~~~~~~~  161 (258)
                      +.|.|.+++||.+|++|++|+++|++.+||||||||||+|||+++++|+|||||+++.+|+.|++.|.++.........+
T Consensus        82 ~~~~f~~a~Pn~~H~aLa~Le~~g~~~~viTQNIDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~~p  161 (318)
T 3k35_A           82 FDTTFESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKA  161 (318)
T ss_dssp             CSSCTTTCCCCHHHHHHHHHHHTTCCCEEEECCCSCHHHHBTCCGGGEEETTCCTTEEEETTTCCEEECSSCCSCCSSCE
T ss_pred             HHHHhhhCCCCHHHHHHHHHHHcCCceEEEEecccchHhhcCCCccCEEEeCCCCCeeEeCCCCCccchHHhhhhcccCC
Confidence            99999999999999999999999999999999999999999998889999999999999999999988765443332223


Q ss_pred             CCCCCCC---CCCCCCCCeecceEEEcCCCCChHHHHHHHHHhccCCEEEEEecCceeE----------------EEEcC
Q psy8970         162 LNISCPY---RGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSF----------------LKCFF  222 (258)
Q Consensus       162 ~~~~C~~---~~c~~Cgg~lrP~Vv~fgE~~~~~~~~~a~~~~~~~Dl~lvvGTSl~V~----------------v~iN~  222 (258)
                      +++.|+.   ..|+.|||.|||+||||||++|.+.++.|.+++++||++|||||||+|+                |+||+
T Consensus       162 ~~~~C~~~~~~~c~~CgG~LRPdVV~FGE~lP~~~~~~a~~~~~~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviIN~  241 (318)
T 3k35_A          162 TGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNL  241 (318)
T ss_dssp             EEEECCC--------CCCEEEECCCCTTCCCCHHHHHHHHHHHHTCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEECS
T ss_pred             CCCcCcccccccccCcCCeeCCCEEEccCcCCHHHHHHHHHHHhcCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEECC
Confidence            3345653   4577899999999999999999999999999999999999999999999                99999


Q ss_pred             CCCCCCCcccEEEEeeccCccccc---cccccCccc
Q psy8970         223 RKTKQNNNTNLCGRVVKSTDSTRR---CRVRIPARA  255 (258)
Q Consensus       223 ~~t~~d~~adl~i~~~~~~~~~~~---~~~~~~~~~  255 (258)
                      ++|+.|+.+|++|++.+++.....   ..|.+|.|-
T Consensus       242 ~~t~~d~~adl~i~g~~~evl~~L~~~Lg~~iP~~~  277 (318)
T 3k35_A          242 QPTKHDRHADLRIHGYVDEVMTRLMKHLGLEIPAWD  277 (318)
T ss_dssp             SCCTTGGGCSEEECSCHHHHHHHHHHHHTCCCCCCC
T ss_pred             CCCCCCCcccEEEeCCHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999887765443   488999885
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A* Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A* Back     alignment and structure
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 258
d1ma3a_252 c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Arc 1e-31
d1yc5a1245 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA 6e-29
d2b4ya1267 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirt 2e-28
d1m2ka_249 c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Ar 6e-27
d1q1aa_289 c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces c 1e-23
d1j8fa_323 c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Ho 6e-23
d1s5pa_235 c.31.1.5 (A:) NAD-dependent deacetylase CobB {Esch 6e-20
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 252 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: AF0112, Sir2 homolog (Sir2-AF2)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score =  114 bits (287), Expect = 1e-31
 Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 23/197 (11%)

Query: 31  DKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKG------------- 77
           + +I+  +E + K+KH V+ TGAGIS  +GIP FRG +G+W                   
Sbjct: 2   EDEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPR 61

Query: 78  ---IKPKVNISFDDAVPTVTHMAILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHG 134
                         A P   H AI EL   G V  V++QNID LH R+G  R  + ELHG
Sbjct: 62  AFWEFSMEMKDKLFAEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGSRR--VLELHG 119

Query: 135 NMYVDQCNKCERQFVRKSATNSVGQKNLNISCPYRGFRPCRGTLHDTILDWEHNLPQKDI 194
           +M    C  C   +          +  +               +   ++ +   LPQ+ +
Sbjct: 120 SMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKC-----GSYYVKPRVVLFGEPLPQRTL 174

Query: 195 NMGDYNSSIADLSICLG 211
                 +   D  + +G
Sbjct: 175 FEAIEEAKHCDAFMVVG 191
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Length = 245 Back     information, alignment and structure
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Length = 267 Back     information, alignment and structure
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 249 Back     information, alignment and structure
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 289 Back     information, alignment and structure
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query258
d1yc5a1245 NAD-dependent deacetylase NpdA {Thermotoga maritim 100.0
d1m2ka_249 AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeo 100.0
d2b4ya1267 NAD-dependent deacetylase sirtuin-5 {Human (Homo s 100.0
d1q1aa_289 Hst2 {Baker's yeast (Saccharomyces cerevisiae) [Ta 100.0
d1ma3a_252 AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeog 100.0
d1j8fa_323 Sirt2 histone deacetylase {Human (Homo sapiens) [T 100.0
d1s5pa_235 NAD-dependent deacetylase CobB {Escherichia coli [ 100.0
d1zpda1175 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 89.36
d1pvda1179 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 87.9
d1ovma1161 Indole-3-pyruvate decarboxylase {Enterobacter cloa 87.85
d2ihta1177 Carboxyethylarginine synthase {Streptomyces clavul 86.94
d1ytla1158 Acetyl-CoA decarbonylase/synthase complex epsilon 86.33
d1ybha1179 Acetohydroxyacid synthase catalytic subunit {Thale 85.96
d2djia1177 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 85.61
d2djia1177 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 85.33
d2ji7a1175 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 85.13
d2ez9a1183 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 83.65
d1ozha1179 Catabolic acetolactate synthase {Klebsiella pneumo 83.53
d1ybha1179 Acetohydroxyacid synthase catalytic subunit {Thale 83.19
d2ihta1177 Carboxyethylarginine synthase {Streptomyces clavul 82.84
d1q6za1160 Benzoylformate decarboxylase {Pseudomonas putida [ 81.92
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase NpdA
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.7e-62  Score=426.87  Aligned_cols=202  Identities=31%  Similarity=0.470  Sum_probs=170.1

Q ss_pred             HHHHHHHHHHhCCcEEEEeCCccCccCCCCCCCCCCCCccccc--------cCCCCcccccc--------cCCCCCHHHH
Q psy8970          33 KIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEK--------KGIKPKVNISF--------DDAVPTVTHM   96 (258)
Q Consensus        33 ~l~~la~~i~~a~~ivv~tGAGiS~~SGIPdFR~~~Glw~~~~--------~~~~p~~~~~f--------~~~~Pn~~H~   96 (258)
                      +|++|+++|++|++|||+|||||||+||||||||++|+|+...        +..+|+.+|.|        .+++||++|+
T Consensus         2 k~~~l~~~l~~~~~ivvltGAGiS~~SGIPdfR~~~G~w~~~~~~~~~~~~f~~~p~~~~~~~~~~~~~~~~~~P~~~H~   81 (245)
T d1yc5a1           2 KMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHV   81 (245)
T ss_dssp             CCHHHHHHHHHCSSEEEEECGGGTGGGTCCCC-----------CCTTBHHHHHHCHHHHHHHHHHHTGGGGGCCCCHHHH
T ss_pred             cHHHHHHHHHhCCCEEEEECchhccccCCCCccCcCCCccCCCcccccHHHHHhhhHHHHHHHHhhhhhhhhhhhhhhhH
Confidence            4789999999999999999999999999999999999997432        23466666654        6899999999


Q ss_pred             HHHHHHHcCCCcEEEeccCcchHhhcCCCcccccccccceeecccCCcccccchhhhhhhccccCCCCCCCCCCCCCCCC
Q psy8970          97 AILELVNRGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNISCPYRGFRPCRG  176 (258)
Q Consensus        97 ~L~~L~~~g~~~~viTQNIDgLh~kAG~~~~~v~elHGsl~~~~C~~C~~~~~~~~~~~~~~~~~~~~~C~~~~c~~Cgg  176 (258)
                      +|++|+++|++.+||||||||||+|||+  ++|+|+||++++.+|..|++.|+.+........ ...|.|+     .|||
T Consensus        82 ~L~~l~~~~~~~~viTQNiDgLh~~AG~--~~v~elHG~l~~~~C~~c~~~~~~~~~~~~~~~-~~~p~c~-----~Cgg  153 (245)
T d1yc5a1          82 LLAKLEEKGLIEAVITQNIDRLHQRAGS--KKVIELHGNVEEYYCVRCEKKYTVEDVIKKLES-SDVPLCD-----DCNS  153 (245)
T ss_dssp             HHHHHHHTTSCSEEEECCCSCHHHHTTC--SCEEETTEEEEEEEETTTCCEEEHHHHHHHTTT-CSSCBCT-----TTCC
T ss_pred             HHHHHHhcCCCceEeecccchHHHHcCC--ccccccccccceeeecccCCCccHHHHhhhhhc-ccCCCcc-----ccCC
Confidence            9999999999999999999999999998  589999999999999999999988776544322 2245555     9999


Q ss_pred             eecceEEEcCCCCChHHHHHHHHHhccCCEEEEEecCceeE----------------EEEcCCCCCCCCcccEEEEeecc
Q psy8970         177 TLHDTILDWEHNLPQKDINMGDYNSSIADLSICLGKCLLSF----------------LKCFFRKTKQNNNTNLCGRVVKS  240 (258)
Q Consensus       177 ~lrP~Vv~fgE~~~~~~~~~a~~~~~~~Dl~lvvGTSl~V~----------------v~iN~~~t~~d~~adl~i~~~~~  240 (258)
                      .+||+||||||++|++.++.|.+++++||++|||||||+|+                |+||+++|++|..+|++|++.++
T Consensus       154 ~lrP~Vv~FgE~lp~~~~~~a~~~~~~~DlllviGTSl~V~p~~~l~~~a~~~g~~~i~IN~~~t~~d~~~d~~i~g~~~  233 (245)
T d1yc5a1         154 LIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVV  233 (245)
T ss_dssp             BEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCCTTGGGCSEEECSCHH
T ss_pred             cccCcEEEccccCCHHHHHHHHHHhhcCCEEEEECCCeEEechhhhhHHHHHcCCeEEEECCCCCCCCcceeEEEeCCHH
Confidence            99999999999999999999999999999999999999999                89999999999999999998665


Q ss_pred             Cc
Q psy8970         241 TD  242 (258)
Q Consensus       241 ~~  242 (258)
                      +.
T Consensus       234 e~  235 (245)
T d1yc5a1         234 EF  235 (245)
T ss_dssp             HH
T ss_pred             HH
Confidence            43
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure