Psyllid ID: psy8

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50
Protein Sequence
MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT
Secondary Structure (PSIPRED)
cHHHHHccccccEEEEEEEEEEEccccccccccEEEEEccEEEccccccc
Secondary Structure Prediction (SSPRO)
cccHHHEcEccHHHccEEEEEEccccccccccccEEEEEEEEcccccccc
Coil and Loop (DISEMBL)
mqnyarkmtipidhlTFDFVVLQInkseappedgvycyglfldgarwdrt
Flexible Loop (DISEMBL)
mqnyarkmtipidhlTFDFVVLQINKseappedgvycyGLFLDGARWDRT
Low Complexity Region (SEG)
MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT
Disordered region (IsUnstruct)
******KMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARW***
Disordered Region (DISOPRED)
MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR*
Disordered Region (DISEMBL)
MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT
Disordered Region (DISPRO)
MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGAR****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	50	2.2.26 [Sep-21-2011]
Q3V0Q1	3086	Dynein heavy chain 12, ax	no	N/A	0.98	0.015	0.653	3e-13
Q923J6	3092	Dynein heavy chain 12, ax	no	N/A	1.0	0.016	0.64	5e-13
Q6ZR08	3092	Dynein heavy chain 12, ax	yes	N/A	0.98	0.015	0.632	4e-12
Q8WXX0	4024	Dynein heavy chain 7, axo	no	N/A	0.96	0.011	0.625	1e-11
Q63170	4057	Dynein heavy chain 7, axo	no	N/A	0.96	0.011	0.625	6e-11
Q8TD57	4116	Dynein heavy chain 3, axo	no	N/A	0.96	0.011	0.653	8e-11
Q8BW94	4083	Dynein heavy chain 3, axo	no	N/A	0.98	0.012	0.62	1e-10
Q63164	4516	Dynein heavy chain 1, axo	no	N/A	0.96	0.010	0.58	4e-09
Q9MBF8	4513	Dynein-1-beta heavy chain	N/A	N/A	0.96	0.010	0.5	5e-09
Q9P2D7	4330	Dynein heavy chain 1, axo	no	N/A	0.96	0.011	0.52	4e-07

>sp|Q3V0Q1|DYH12_MOUSE Dynein heavy chain 12, axonemal OS=Mus musculus GN=Dnah12 PE=1 SV=2

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 40/49 (81%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
            MQN+ARK TIPID L ++F V+  + S+ PPEDGVY +GL+LDGARWDR
Sbjct: 2951 MQNFARKYTIPIDLLGYEFEVIPFDYSDTPPEDGVYIHGLYLDGARWDR 2999

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.
Mus musculus (taxid: 10090)

>sp|Q923J6|DYH12_RAT Dynein heavy chain 12, axonemal OS=Rattus norvegicus GN=Dnah12 PE=2 SV=2

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/50 (64%), Positives = 40/50 (80%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
            MQNYARK TIPID L ++F V+  + +  PPEDGVY +GL+LDGARW+RT
Sbjct: 2958 MQNYARKYTIPIDLLGYEFEVIPSDNATNPPEDGVYIHGLYLDGARWNRT 3007

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Rattus norvegicus (taxid: 10116)

>sp|Q6ZR08|DYH12_HUMAN Dynein heavy chain 12, axonemal OS=Homo sapiens GN=DNAH12 PE=2 SV=2

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 38/49 (77%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
            MQNYARK T PID L ++F V+  + S+  PEDGVY +GL+LDGARWDR
Sbjct: 2957 MQNYARKYTTPIDLLGYEFEVIPSDTSDTSPEDGVYIHGLYLDGARWDR 3005

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Homo sapiens (taxid: 9606)

>sp|Q8WXX0|DYH7_HUMAN Dynein heavy chain 7, axonemal OS=Homo sapiens GN=DNAH7 PE=1 SV=2

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 38/48 (79%)

Query: 2    QNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
            QNYARK TIPID L FD+ V++  + + PPEDGV+ +GLFLDGA W+R
Sbjct: 3890 QNYARKYTIPIDLLGFDYEVMEDKEYKHPPEDGVFIHGLFLDGASWNR 3937

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Homo sapiens (taxid: 9606)

>sp|Q63170|DYH7_RAT Dynein heavy chain 7, axonemal OS=Rattus norvegicus GN=Dnah7 PE=2 SV=2

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 36/48 (75%)

Query: 2    QNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
            QNYARK TIPID L FD+ V+   + +  PEDGVY +GLFLDGA W+R
Sbjct: 3923 QNYARKFTIPIDLLGFDYEVMDDKEYKNAPEDGVYIHGLFLDGASWNR 3970

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Rattus norvegicus (taxid: 10116)

>sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 35/49 (71%), Gaps = 1/49 (2%)

Query: 2    QNYARKMTIPIDHLTFDF-VVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
            QNYARK TIPIDH+ F+F V  Q    E  PEDG Y  GLFL+GARWDR
Sbjct: 3981 QNYARKYTIPIDHIGFEFEVTPQETVMENNPEDGAYIKGLFLEGARWDR 4029

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Homo sapiens (taxid: 9606)

>sp|Q8BW94|DYH3_MOUSE Dynein heavy chain 3, axonemal OS=Mus musculus GN=Dnah3 PE=1 SV=2

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 1/50 (2%)

Query: 2    QNYARKMTIPIDHLTFDFVVLQINKS-EAPPEDGVYCYGLFLDGARWDRT 50
            QNYARK TIPIDH+ F+F V     + E  PEDG Y  GLFL+GARWDR+
Sbjct: 3948 QNYARKYTIPIDHIGFEFEVTPKETTMENIPEDGAYIKGLFLEGARWDRS 3997

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Mus musculus (taxid: 10090)

>sp|Q63164|DYH1_RAT Dynein heavy chain 1, axonemal OS=Rattus norvegicus GN=Dnah1 PE=2 SV=2

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAP--PEDGVYCYGLFLDGARWD 48
            +QN+ARK  I ID +TFDF VL    SE    P  G Y YGLFL+GARWD
Sbjct: 4379 LQNFARKFVISIDTITFDFKVLSYASSEIAERPSTGCYIYGLFLEGARWD 4428

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Rattus norvegicus (taxid: 10116)

>sp|Q9MBF8|DYH1B_CHLRE Dynein-1-beta heavy chain, flagellar inner arm I1 complex OS=Chlamydomonas reinhardtii GN=DHC10 PE=1 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 38/50 (76%), Gaps = 2/50 (4%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWD 48
            +Q  ARK ++PID L+F+F ++ +++ E  APP++GVY  GLFL+GA WD
Sbjct: 4379 LQTTARKASVPIDTLSFEFSIINLDEREINAPPKEGVYIKGLFLEGAGWD 4428

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for assembly of the I1 inner arm complex and its targeting to the appropriate axoneme location. Also required for phototaxis.

Chlamydomonas reinhardtii (taxid: 3055)

>sp|Q9P2D7|DYH1_HUMAN Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=2 SV=4

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAP--PEDGVYCYGLFLDGARWD 48
            +QN+ARK  I ID ++FDF V+    SE    P+ G Y +GLFL+GARWD
Sbjct: 4193 LQNFARKFVISIDTISFDFKVMFEAPSELTQRPQVGCYIHGLFLEGARWD 4242

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	50
432866346	3970	PREDICTED: dynein heavy chain 7, axonema	0.98	0.012	0.775	2e-14
194747044	3918	GF24965 [Drosophila ananassae] gi|190623	0.96	0.012	0.708	3e-13
405963852	4063	Dynein heavy chain 7, axonemal [Crassost	1.0	0.012	0.7	4e-13
328699367	2330	PREDICTED: dynein heavy chain 7, axonema	0.98	0.021	0.673	5e-13
242013690	4014	dynein beta chain, ciliary, putative [Pe	0.98	0.012	0.714	6e-13
340374282	3962	PREDICTED: dynein heavy chain 7, axonema	0.98	0.012	0.653	7e-13
83318903	1754	axonemal dynein heavy chain protein [Pla	1.0	0.028	0.68	9e-13
156397380	3941	predicted protein [Nematostella vectensi	0.96	0.012	0.729	1e-12
328715585	4007	PREDICTED: dynein heavy chain 7, axonema	1.0	0.012	0.66	2e-12
195440988	3915	GK25428 [Drosophila willistoni] gi|19416	0.96	0.012	0.687	3e-12

>gi|432866346|ref|XP_004070806.1| PREDICTED: dynein heavy chain 7, axonemal-like [Oryzias latipes]

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 41/49 (83%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
            MQN+ARK  IPID LTFDF VL I+KSE PPEDGVY  GLFLDGARWD+
Sbjct: 3834 MQNFARKYQIPIDLLTFDFEVLPIDKSETPPEDGVYVNGLFLDGARWDK 3882

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|194747044|ref|XP_001955964.1| GF24965 [Drosophila ananassae] gi|190623246|gb|EDV38770.1| GF24965 [Drosophila ananassae]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/48 (70%), Positives = 39/48 (81%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWD 48
            MQNYARK  IPID LTFD+VV ++    APPEDGVYC GLFL+GARW+
Sbjct: 3783 MQNYARKYKIPIDTLTFDYVVQKVETKAAPPEDGVYCNGLFLEGARWE 3830

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405963852|gb|EKC29390.1| Dynein heavy chain 7, axonemal [Crassostrea gigas]

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 40/50 (80%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
            MQN+ARK TIPID L FDF VL I+ S+  PEDG Y YGLFLDGARW++T
Sbjct: 3927 MQNFARKYTIPIDTLAFDFDVLSIDNSDTAPEDGCYVYGLFLDGARWNKT 3976

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|328699367|ref|XP_001942836.2| PREDICTED: dynein heavy chain 7, axonemal-like [Acyrthosiphon pisum]

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 40/49 (81%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
            MQN+AR+ T+PID L FDF V + ++  A PEDGVYCYGLF+DGARWDR
Sbjct: 2195 MQNFARRYTVPIDQLCFDFEVQRSDRINAAPEDGVYCYGLFVDGARWDR 2243

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013690|ref|XP_002427535.1| dynein beta chain, ciliary, putative [Pediculus humanus corporis] gi|212511937|gb|EEB14797.1| dynein beta chain, ciliary, putative [Pediculus humanus corporis]

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/49 (71%), Positives = 38/49 (77%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
            MQN+ARK TIPID LTFDF V  + K   PP DGVY YGLF+DGARWDR
Sbjct: 3879 MQNFARKYTIPIDQLTFDFEVTNLGKIAKPPIDGVYIYGLFVDGARWDR 3927

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340374282|ref|XP_003385667.1| PREDICTED: dynein heavy chain 7, axonemal-like [Amphimedon queenslandica]

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 40/49 (81%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
            +QNYARK  IPID L+FDF V+ ++  + PPEDGVY +GL+LDGARWDR
Sbjct: 3827 LQNYARKYVIPIDKLSFDFEVIPVDSKDTPPEDGVYVHGLYLDGARWDR 3875

Source: Amphimedon queenslandica

Species: Amphimedon queenslandica

Genus: Amphimedon

Family: Niphatidae

Order: Haplosclerida

Class: Demospongiae

Phylum: Porifera

Superkingdom: Eukaryota

>gi|83318903|emb|CAJ38790.1| axonemal dynein heavy chain protein [Platynereis dumerilii]

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/50 (68%), Positives = 40/50 (80%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
            MQNYARK TIPID L FD+ +L I+KS+  P DG Y +GLFLDGARWDR+
Sbjct: 1618 MQNYARKYTIPIDQLGFDYEILPIDKSDKGPPDGAYIFGLFLDGARWDRS 1667

Source: Platynereis dumerilii

Species: Platynereis dumerilii

Genus: Platynereis

Family: Nereididae

Order: Phyllodocida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|156397380|ref|XP_001637869.1| predicted protein [Nematostella vectensis] gi|156224985|gb|EDO45806.1| predicted protein [Nematostella vectensis]

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 39/48 (81%)

Query: 2    QNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
            QN+ARK TIPID LTFDF VL+  K E PPEDGVY  GLF++GARWDR
Sbjct: 3807 QNFARKYTIPIDLLTFDFEVLEDKKYETPPEDGVYVNGLFMEGARWDR 3854

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|328715585|ref|XP_001951180.2| PREDICTED: dynein heavy chain 7, axonemal-like [Acyrthosiphon pisum]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 38/50 (76%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
            MQN+AR+ TIPID L FDF V   +K   PP DGVYCYGLF+DGARWD +
Sbjct: 3872 MQNFARRYTIPIDQLCFDFHVQHSDKVNKPPVDGVYCYGLFIDGARWDMS 3921

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195440988|ref|XP_002068315.1| GK25428 [Drosophila willistoni] gi|194164400|gb|EDW79301.1| GK25428 [Drosophila willistoni]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/48 (68%), Positives = 38/48 (79%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWD 48
            MQNYARK  IPID LTFD+ VL ++    PPEDGVYC GL+L+GARWD
Sbjct: 3780 MQNYARKYKIPIDTLTFDYDVLNVDTKPLPPEDGVYCNGLYLEGARWD 3827

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	50
UNIPROTKB|F1Q4D7	3351	DNAH12 "Uncharacterized protei	1.0	0.014	0.68	2.8e-12
UNIPROTKB|J9NYC7	3960	DNAH12 "Uncharacterized protei	1.0	0.012	0.68	3.3e-12
MGI|MGI:107720	3086	Dnahc12 "dynein, axonemal, hea	0.98	0.015	0.653	6.8e-12
UNIPROTKB|G3MZG0	3416	G3MZG0 "Uncharacterized protei	1.0	0.014	0.66	1.2e-11
UNIPROTKB|F1MKJ3	3432	F1MKJ3 "Uncharacterized protei	1.0	0.014	0.66	1.2e-11
UNIPROTKB|H7C5N3	737	DNAH12 "Dynein heavy chain 12,	0.98	0.066	0.632	1.4e-11
ZFIN|ZDB-GENE-070912-282	4001	dnah7 "dynein, axonemal, heavy	0.96	0.011	0.687	1.5e-11
UNIPROTKB|H7C5R2	783	DNAH12 "Dynein heavy chain 12,	0.98	0.062	0.632	1.5e-11
UNIPROTKB|F1M7G2	2954	Asb14 "Ankyrin repeat and SOCS	1.0	0.016	0.64	1.7e-11
RGD|619990	3092	Dnah12 "dynein, axonemal, heav	1.0	0.016	0.64	1.8e-11

UNIPROTKB|F1Q4D7 DNAH12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 183 (69.5 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 34/50 (68%), Positives = 40/50 (80%)

Query:     1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
             MQNYARK TIPID L ++F V+  + SE  PEDGVY +GL+LDGARWDRT
Sbjct:  3216 MQNYARKYTIPIDILGYEFEVIPADTSETAPEDGVYIHGLYLDGARWDRT 3265

GO:0005524 "ATP binding" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|J9NYC7 DNAH12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 183 (69.5 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 34/50 (68%), Positives = 40/50 (80%)

Query:     1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
             MQNYARK TIPID L ++F V+  + SE  PEDGVY +GL+LDGARWDRT
Sbjct:  3825 MQNYARKYTIPIDILGYEFEVIPADTSETAPEDGVYIHGLYLDGARWDRT 3874

GO:0005524 "ATP binding" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

MGI|MGI:107720 Dnahc12 "dynein, axonemal, heavy chain 12" [Mus musculus (taxid:10090)]

 Score = 179 (68.1 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 32/49 (65%), Positives = 40/49 (81%)

Query:     1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
             MQN+ARK TIPID L ++F V+  + S+ PPEDGVY +GL+LDGARWDR
Sbjct:  2951 MQNFARKYTIPIDLLGYEFEVIPFDYSDTPPEDGVYIHGLYLDGARWDR 2999

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0003774 "motor activity" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

UNIPROTKB|G3MZG0 G3MZG0 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 177 (67.4 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/50 (66%), Positives = 40/50 (80%)

Query:     1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
             MQNYARK TIPID L ++F V+  + S+  PEDGVY +GL+LDGARWDRT
Sbjct:  3281 MQNYARKYTIPIDLLGYEFEVIPSDTSKEAPEDGVYIHGLYLDGARWDRT 3330

GO:0005524 "ATP binding" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|F1MKJ3 F1MKJ3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 177 (67.4 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/50 (66%), Positives = 40/50 (80%)

Query:     1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
             MQNYARK TIPID L ++F V+  + S+  PEDGVY +GL+LDGARWDRT
Sbjct:  3297 MQNYARKYTIPIDLLGYEFEVIPSDTSKEAPEDGVYIHGLYLDGARWDRT 3346

GO:0005524 "ATP binding" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|H7C5N3 DNAH12 "Dynein heavy chain 12, axonemal" [Homo sapiens (taxid:9606)]

 Score = 169 (64.5 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 31/49 (63%), Positives = 38/49 (77%)

Query:     1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
             MQNYARK T PID L ++F V+  + S+  PEDGVY +GL+LDGARWDR
Sbjct:   602 MQNYARKYTTPIDLLGYEFEVIPSDTSDTSPEDGVYIHGLYLDGARWDR 650

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

ZFIN|ZDB-GENE-070912-282 dnah7 "dynein, axonemal, heavy chain 7" [Danio rerio (taxid:7955)]

 Score = 177 (67.4 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 33/48 (68%), Positives = 39/48 (81%)

Query:     2 QNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
             QNYAR+ TIPID L+FDF V++  + + PPEDGVY  GLFLDGARWDR
Sbjct:  3867 QNYARRYTIPIDLLSFDFEVMEDKEYKNPPEDGVYIRGLFLDGARWDR 3914

GO:0016887 "ATPase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0001539 "ciliary or flagellar motility" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|H7C5R2 DNAH12 "Dynein heavy chain 12, axonemal" [Homo sapiens (taxid:9606)]

 Score = 169 (64.5 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 31/49 (63%), Positives = 38/49 (77%)

Query:     1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
             MQNYARK T PID L ++F V+  + S+  PEDGVY +GL+LDGARWDR
Sbjct:   648 MQNYARKYTTPIDLLGYEFEVIPSDTSDTSPEDGVYIHGLYLDGARWDR 696

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

UNIPROTKB|F1M7G2 Asb14 "Ankyrin repeat and SOCS box protein 14" [Rattus norvegicus (taxid:10116)]

 Score = 175 (66.7 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 32/50 (64%), Positives = 40/50 (80%)

Query:     1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
             MQNYARK TIPID L ++F V+  + +  PPEDGVY +GL+LDGARW+RT
Sbjct:  2315 MQNYARKYTIPIDLLGYEFEVIPSDNATNPPEDGVYIHGLYLDGARWNRT 2364

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

RGD|619990 Dnah12 "dynein, axonemal, heavy chain 12" [Rattus norvegicus (taxid:10116)]

 Score = 175 (66.7 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 32/50 (64%), Positives = 40/50 (80%)

Query:     1 MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT 50
             MQNYARK TIPID L ++F V+  + +  PPEDGVY +GL+LDGARW+RT
Sbjct:  2958 MQNYARKYTIPIDLLGYEFEVIPSDNATNPPEDGVYIHGLYLDGARWNRT 3007

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0035085 "cilium axoneme" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6ZR08	DYH12_HUMAN	No assigned EC number	0.6326	0.98	0.0158	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	50
pfam03028	706	pfam03028, Dynein_heavy, Dynein heavy chain and re	2e-15

>gnl|CDD|217325 pfam03028, Dynein_heavy, Dynein heavy chain and region D6 of dynein motor

 Score = 67.3 bits (165), Expect = 2e-15
 Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 1   MQNYARKMTIPIDHLTFDFVVLQINKSE--APPEDGVYCYGLFLDGARWDRT 50
           MQ+ ARK   P+D L     V +  K E  + P DG Y +GLFL+GARWD  
Sbjct: 580 MQSVARKNKWPLDKLCLQTDVTKKEKEEFDSAPRDGFYVHGLFLEGARWDGQ 631

This family represents the C-terminal region of dynein heavy chain. The chain also contains ATPase activity and microtubule binding ability and acts as a motor for the movement of organelles and vesicles along microtubules. Dynein is also involved in cilia and flagella movement. The dynein subunit consists of at least two heavy chains and a number of intermediate and light chains. The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures described previously, and two are modules in which the P loop has been lost in evolution. This C-terminal domain carries the D6 region of the dynein motor where the P-loop has been lost in evolution but the general structure of a potential ATP binding site appears to be retained. Length = 706

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	50
PF03028	707	Dynein_heavy: Dynein heavy chain and region D6 of	99.59

>PF03028 Dynein_heavy: Dynein heavy chain and region D6 of dynein motor; InterPro: IPR004273 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella

Probab=99.59  E-value=4.1e-16  Score=109.07  Aligned_cols=49  Identities=57%  Similarity=1.007  Sum_probs=28.0

Q ss_pred             ChhhhhhcCCCceEEEeEEEEEecc--CCCCCCCCeEEEeeeeEeeeccCC
Q psy8              1 MQNYARKMTIPIDHLTFDFVVLQIN--KSEAPPEDGVYCYGLFLDGARWDR   49 (50)
Q Consensus         1 lQ~~ARk~~ipiD~l~~~~~v~~~~--~~~~~p~~GvyI~GLfLeGA~Wd~   49 (50)
                      +|++||++++|||+|.|.++|++.+  +...+|++|+||+|||||||+||.
T Consensus       581 rQ~~AR~~~~~ld~L~l~~~v~~~~~~~~~~~~~~g~~I~GL~leGA~wd~  631 (707)
T PF03028_consen  581 RQEYARKNKIPLDQLTLSFEVTSSEDENIRSPPEDGVYIHGLFLEGARWDG  631 (707)
T ss_dssp             HHHHHHHTT-----EE--EE--------------EEEEE-SEEEESSEEET
T ss_pred             HHHHHHhcCcCchhcceeEEEEeccccccccccccceEEEeEEecccEecc
Confidence            5999999999999999999999863  344578999999999999999996

The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits, intermediate size subunits and small subunits (see IPR001372 from INTERPRO). This family represents the C-terminal region of dynein heavy chain. The dynein heavy chain also exhibits ATPase activity and microtubule binding ability and acts as a motor for the movement of organelles and vesicles along microtubules. ; GO: 0003777 microtubule motor activity, 0007018 microtubule-based movement, 0030286 dynein complex; PDB: 3VKG_A 3VKH_C 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	50
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	2e-20

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245

 Score = 80.7 bits (199), Expect = 2e-20
 Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 1    MQNYARKMTIPIDHLTFDFVVLQINKSEAPPEDGVYCYGLFLDGARWDR 49
             Q+ ++     +++L      L   K  +         G+ L+GA W+ 
Sbjct: 3120 RQSASQLNGWSLENLRLHASSL--GKISSEGGASFNVKGMALEGAVWNN 3166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	50
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	99.63

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*

Probab=99.63  E-value=2.6e-17  Score=127.47  Aligned_cols=47  Identities=17%  Similarity=0.279  Sum_probs=29.3

Q ss_pred             ChhhhhhcCCCceEEEe-EEEEEeccCCCCCCCCeEEEeeeeEeeeccCCC
Q psy8              1 MQNYARKMTIPIDHLTF-DFVVLQINKSEAPPEDGVYCYGLFLDGARWDRT   50 (50)
Q Consensus         1 lQ~~ARk~~ipiD~l~~-~~~v~~~~~~~~~p~~GvyI~GLfLeGA~Wd~~   50 (50)
                      +|++||+++||||+|+| +|+|++.+.   .|++|||||||||||||||.+
T Consensus      3120 ~Q~~ARk~~~plD~l~l~~~~V~~~~~---~p~~G~yI~GL~LeGA~WD~~ 3167 (3245)
T 3vkg_A         3120 RQSASQLNGWSLENLRLHASSLGKISS---EGGASFNVKGMALEGAVWNND 3167 (3245)
T ss_dssp             HHHHHHHTC------CCCBC-------------CCEEECSCEEESCEECSS
T ss_pred             HHHHHHHhCCCCccceeeeEEEecCCC---CCCceEEEeCEEEeccEecCC
Confidence            59999999999999999 999986532   289999999999999999963

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00