Psyllid ID: psy9050

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70---
Protein Sequence
MGYLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFSCFKNAHTLSYV
Secondary Structure (PSIPRED)
ccEEEcccccccccccHHHHHHHHHHHHHccccHHHHHHHHcHHHHHHHHHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEccccccccccHHHHHHHHHHHHHHccccHHHHHHHcHHHHHHHHHHHHHHcccccccccccccEEEc
Coil and Loop (DISEMBL)
mgylistlcgppcdcpeyIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVfpwcfscfknahtlsyv
Flexible Loop (DISEMBL)
mgylistlcgppcDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFSCfknahtlsyv
Low Complexity Region (SEG)
MGYLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFSCFKNAHTLSYV
Disordered region (IsUnstruct)
**YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFSCFKNAHTL***
Disordered Region (DISOPRED)
MGYLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCF************
Disordered Region (DISEMBL)
MGYLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFSCFKNAHTLSYV
Disordered Region (DISPRO)
MGYLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFSCFKNAHTLSYV
Transmembrane Helix (TMHMM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGYLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFSCFKNAHTLSYV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	73	2.2.26 [Sep-21-2011]
Q4LBB6	1256	Octopamine receptor beta-	yes	N/A	0.767	0.044	0.714	7e-22
Q9VCZ3	508	Octopamine receptor beta-	no	N/A	0.794	0.114	0.627	1e-15
Q4LBB9	536	Octopamine receptor beta-	no	N/A	0.684	0.093	0.686	3e-14
P32251	436	Alpha-2 adrenergic recept	N/A	N/A	0.671	0.112	0.510	1e-09
Q8JG70	408	Alpha-2Da adrenergic rece	no	N/A	0.698	0.125	0.490	2e-09
Q25322	484	Putative tyramine recepto	N/A	N/A	0.726	0.109	0.471	5e-09
Q25321	484	Tyramine receptor 1 OS=Lo	N/A	N/A	0.726	0.109	0.471	5e-09
O42385	423	5-hydroxytryptamine recep	N/A	N/A	0.684	0.118	0.48	3e-08
Q8JG69	415	Alpha-2Db adrenergic rece	no	N/A	0.698	0.122	0.450	3e-08
Q64264	421	5-hydroxytryptamine recep	yes	N/A	0.739	0.128	0.462	3e-08

>sp|Q4LBB6|OCTB3_DROME Octopamine receptor beta-3R OS=Drosophila melanogaster GN=Octbeta3R PE=2 SV=4

 Score =  102 bits (254), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/56 (71%), Positives = 48/56 (85%)

Query: 3    YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP 58
            Y+I++LCGP C CP+ +V +LFWIGYFNS LNPL+YAYFNRDFREAF+NTL  V P
Sbjct: 1188 YVITSLCGPACPCPDVLVVVLFWIGYFNSTLNPLIYAYFNRDFREAFRNTLECVLP 1243

Receptor for octopamine. Octopamine (OA) is a neurotransmitter, neurohormone, and neuromodulator in invertebrates. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.
Drosophila melanogaster (taxid: 7227)

>sp|Q9VCZ3|OCTB1_DROME Octopamine receptor beta-1R OS=Drosophila melanogaster GN=oa2 PE=2 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 1/59 (1%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCF 61
           Y++S+LC   C  P  +V ILFWIGYFNS LNP++YAYFNRDFR AFK TL  +FP+ F
Sbjct: 370 YIVSSLC-DSCITPRLLVGILFWIGYFNSALNPIIYAYFNRDFRAAFKKTLKSLFPYAF 427

Receptor for octopamine. Octopamine (OA) is a neurotransmitter, neurohormone, and neuromodulator in invertebrates. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Octopamine does not cause Ca(2+) release in oa2-expressing cells.

Drosophila melanogaster (taxid: 7227)

>sp|Q4LBB9|OCTB2_DROME Octopamine receptor beta-2R OS=Drosophila melanogaster GN=Octbeta2R PE=2 SV=2

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 1/51 (1%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
           Y +S  C   C  P+ +V+ILFWIGYFNS LNPL+YAYFNRDFREAF+NTL
Sbjct: 431 YTLSMTC-EECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTL 480

Receptor for octopamine. Octopamine (OA) is a neurotransmitter, neurohormone, and neuromodulator in invertebrates. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Drosophila melanogaster (taxid: 7227)

>sp|P32251|ADRA2_CARAU Alpha-2 adrenergic receptor OS=Carassius auratus PE=3 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 34/49 (69%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKN 51
           Y +  +CG  C+ PE +  + FWIGY NS +NP++Y  FNRDFR+AFK 
Sbjct: 348 YSLHAICGDSCEPPEALFKLFFWIGYCNSSVNPIIYTIFNRDFRKAFKK 396

Alpha-2 adrenergic receptors mediate the catecholamine-induced inhibition of adenylate cyclase through the action of G proteins.

Carassius auratus (taxid: 7957)

>sp|Q8JG70|AA2DA_DANRE Alpha-2Da adrenergic receptor OS=Danio rerio GN=adra2da PE=2 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
           Y +  +CG  C  PE +  + FWIGY NS +NP++Y  FNRDFR+AFK  +
Sbjct: 351 YSLQAVCGERCGPPEALFKLFFWIGYCNSSVNPIIYTIFNRDFRKAFKKVV 401

Alpha-2 adrenergic receptors mediate the catecholamine-induced inhibition of adenylate cyclase through the action of G proteins. The order of potency for this receptor is dexmedetomidine > norepinephrine > epinephrine > oxymetazoline.

Danio rerio (taxid: 7955)

>sp|Q25322|OAR2_LOCMI Putative tyramine receptor 2 OS=Locusta migratoria GN=GCR2 PE=2 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 31/53 (58%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF 55
           Y+I   C P C     +V  + W+GY NS LNP++Y  FN DFR AFK  L F
Sbjct: 430 YVIVPFCNPSCKPSPKLVNFITWLGYINSALNPIIYTIFNLDFRRAFKKLLHF 482

G-protein coupled receptor for tyramine, a known neurotransmitter and neuromodulator and direct precursor of octopamine.

Locusta migratoria (taxid: 7004)

>sp|Q25321|OAR1_LOCMI Tyramine receptor 1 OS=Locusta migratoria GN=GCR1 PE=1 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 31/53 (58%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF 55
           Y+I   C P C     +V  + W+GY NS LNP++Y  FN DFR AFK  L F
Sbjct: 430 YVIVPFCNPSCKPSPKLVNFITWLGYINSALNPIIYTIFNLDFRRAFKKLLHF 482

G-protein coupled receptor for tyramine, a known neurotransmitter and neuromodulator and direct precursor of octopamine. The rank order of potency for agonists of this receptor is tyramine > naphazoline > tolazoline > DL-octopamine > dopamine > epinephrine > 5-hydroxytryptamine. For antagonists, the rank order is yohimbine > chlorpromazine > mianserin > phentolamine > metoclopramide.

Locusta migratoria (taxid: 7004)

>sp|O42385|5H1AA_TAKRU 5-hydroxytryptamine receptor 1A-alpha OS=Takifugu rubripes GN=htr1aa PE=3 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 35/50 (70%)

Query: 4   LISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
           L+   C   C  PE++  ++ W+GY NS+LNP++YAYFN+DF+ AFK  L
Sbjct: 367 LVLPFCAENCYMPEWLGAVINWLGYSNSLLNPIIYAYFNKDFQSAFKKIL 416

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. The activity of this receptor is mediated by G proteins that inhibit adenylate cyclase activity.

Takifugu rubripes (taxid: 31033)

>sp|Q8JG69|AA2DB_DANRE Alpha-2Db adrenergic receptor OS=Danio rerio GN=adra2db PE=2 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 33/51 (64%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
           Y +  +C   C  P+ +  + FWIGY NS +NP++Y  FNRDFR+AFK  +
Sbjct: 358 YSLHAICRKSCTIPDSLFNLFFWIGYCNSSVNPIIYTIFNRDFRKAFKKIM 408

Alpha-2 adrenergic receptors mediate the catecholamine-induced inhibition of adenylate cyclase through the action of G proteins. The order of potency for this receptor is dexmedetomidine > norepinephrine = epinephrine > oxymetazoline.

Danio rerio (taxid: 7955)

>sp|Q64264|5HT1A_MOUSE 5-hydroxytryptamine receptor 1A OS=Mus musculus GN=Htr1a PE=2 SV=2

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 35/54 (64%)

Query: 4   LISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF 57
           L+   C   C  PE +  I+ W+GY NS+LNP++YAYFN+DF+ AFK  +   F
Sbjct: 366 LVLPFCESSCHMPELLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKF 419

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. The activity of this receptor is mediated by G proteins that inhibit adenylate cyclase activity.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
328705267	454	PREDICTED: octopamine receptor beta-3R-l	0.972	0.156	0.689	2e-20
221379028	1256	Octbeta3R, isoform F [Drosophila melanog	0.767	0.044	0.714	3e-20
221379031	1118	Octbeta3R, isoform G [Drosophila melanog	0.767	0.050	0.714	4e-20
116875713	1256	IP08282p [Drosophila melanogaster]	0.767	0.044	0.714	4e-20
194764823	1281	GF23003 [Drosophila ananassae] gi|190614	0.767	0.043	0.714	4e-20
195329498	1139	GM26001 [Drosophila sechellia] gi|194120	0.767	0.049	0.714	7e-20
242022776	72	beta adrenergic receptor, putative [Pedi	0.986	1.0	0.657	8e-20
357622752	298	hypothetical protein KGM_17023 [Danaus p	0.972	0.238	0.619	1e-19
195450841	1230	GK13570 [Drosophila willistoni] gi|19416	0.767	0.045	0.696	3e-19
347968755	1230	AGAP002888-PC [Anopheles gambiae str. PE	0.794	0.047	0.683	4e-19

>gi|328705267|ref|XP_001948521.2| PREDICTED: octopamine receptor beta-3R-like [Acyrthosiphon pisum]

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/74 (68%), Positives = 58/74 (78%), Gaps = 3/74 (4%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFS 62
           Y+ISTLCG PC  PE +VT+LFWIGYFNS LNPL+YAYFNRDFREAFKNTL  VFP C S
Sbjct: 381 YVISTLCGDPCSFPETLVTVLFWIGYFNSSLNPLIYAYFNRDFREAFKNTLQCVFPCCQS 440

Query: 63  C---FKNAHTLSYV 73
           C     ++  +SYV
Sbjct: 441 CCPKESDSTAMSYV 454

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221379028|ref|NP_001034048.2| Octbeta3R, isoform F [Drosophila melanogaster] gi|347595820|sp|Q4LBB6.4|OCTB3_DROME RecName: Full=Octopamine receptor beta-3R; Short=DmOct-beta-3R gi|220903060|gb|ABC66173.2| Octbeta3R, isoform F [Drosophila melanogaster]

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/56 (71%), Positives = 48/56 (85%)

Query: 3    YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP 58
            Y+I++LCGP C CP+ +V +LFWIGYFNS LNPL+YAYFNRDFREAF+NTL  V P
Sbjct: 1188 YVITSLCGPACPCPDVLVVVLFWIGYFNSTLNPLIYAYFNRDFREAFRNTLECVLP 1243

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221379031|ref|NP_650210.2| Octbeta3R, isoform G [Drosophila melanogaster] gi|220903061|gb|AAF54832.2| Octbeta3R, isoform G [Drosophila melanogaster]

 Score =  102 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/56 (71%), Positives = 48/56 (85%)

Query: 3    YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP 58
            Y+I++LCGP C CP+ +V +LFWIGYFNS LNPL+YAYFNRDFREAF+NTL  V P
Sbjct: 1050 YVITSLCGPACPCPDVLVVVLFWIGYFNSTLNPLIYAYFNRDFREAFRNTLECVLP 1105

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|116875713|gb|ABK30906.1| IP08282p [Drosophila melanogaster]

 Score =  102 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/56 (71%), Positives = 48/56 (85%)

Query: 3    YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP 58
            Y+I++LCGP C CP+ +V +LFWIGYFNS LNPL+YAYFNRDFREAF+NTL  V P
Sbjct: 1188 YVITSLCGPACPCPDVLVVVLFWIGYFNSTLNPLIYAYFNRDFREAFRNTLECVLP 1243

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194764823|ref|XP_001964528.1| GF23003 [Drosophila ananassae] gi|190614800|gb|EDV30324.1| GF23003 [Drosophila ananassae]

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/56 (71%), Positives = 48/56 (85%)

Query: 3    YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP 58
            Y+I++LCGP C CP+ +V +LFWIGYFNS LNPL+YAYFNRDFREAF+NTL  V P
Sbjct: 1213 YVITSLCGPACPCPDVLVVVLFWIGYFNSTLNPLIYAYFNRDFREAFRNTLECVLP 1268

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195329498|ref|XP_002031447.1| GM26001 [Drosophila sechellia] gi|194120390|gb|EDW42433.1| GM26001 [Drosophila sechellia]

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/56 (71%), Positives = 48/56 (85%)

Query: 3    YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP 58
            Y+I++LCGP C CP+ +V +LFWIGYFNS LNPL+YAYFNRDFREAF+NTL  V P
Sbjct: 1071 YVITSLCGPACPCPDVLVVVLFWIGYFNSTLNPLIYAYFNRDFREAFRNTLECVLP 1126

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242022776|ref|XP_002431814.1| beta adrenergic receptor, putative [Pediculus humanus corporis] gi|212517146|gb|EEB19076.1| beta adrenergic receptor, putative [Pediculus humanus corporis]

 Score =  100 bits (250), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 56/73 (76%), Gaps = 1/73 (1%)

Query: 1  MGYLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWC 60
          M Y+I+TLCG  C CPE +V +LFWIGYFNS LNPL+YAYFNRDFREAFKNTL  V P C
Sbjct: 1  MTYVITTLCGDTCYCPEVVVAVLFWIGYFNSALNPLIYAYFNRDFREAFKNTLECVLP-C 59

Query: 61 FSCFKNAHTLSYV 73
           +C+K   +  YV
Sbjct: 60 LTCWKTESSSHYV 72

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357622752|gb|EHJ74155.1| hypothetical protein KGM_17023 [Danaus plexippus]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 55/71 (77%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFS 62
           Y+ + +CG PCD P+ +V +LFWIGYFNS LNPL+YAYFNRDFR+AFKNTL    P CF 
Sbjct: 228 YVTTNVCGEPCDTPDVVVGVLFWIGYFNSALNPLIYAYFNRDFRDAFKNTLMCALPCCFK 287

Query: 63  CFKNAHTLSYV 73
           C+K+  T S+V
Sbjct: 288 CWKDTGTASFV 298

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195450841|ref|XP_002072656.1| GK13570 [Drosophila willistoni] gi|194168741|gb|EDW83642.1| GK13570 [Drosophila willistoni]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/56 (69%), Positives = 47/56 (83%)

Query: 3    YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP 58
            Y+I++LCG  C CP+ +V +LFWIGYFNS LNPL+YAYFNRDFREAF+NTL  V P
Sbjct: 1162 YVITSLCGSACPCPDVLVVVLFWIGYFNSTLNPLIYAYFNRDFREAFRNTLECVLP 1217

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347968755|ref|XP_003436282.1| AGAP002888-PC [Anopheles gambiae str. PEST] gi|333467858|gb|EGK96732.1| AGAP002888-PC [Anopheles gambiae str. PEST]

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/60 (68%), Positives = 50/60 (83%), Gaps = 2/60 (3%)

Query: 3    YLISTLCGP-PCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCF 61
            Y+I+TLCG   C CP+ ++T+LFWIGYFNS LNPL+YAYFNRDFREAF+NTL  + P CF
Sbjct: 1159 YVITTLCGEEACPCPDVVITVLFWIGYFNSTLNPLIYAYFNRDFREAFRNTLQSLLP-CF 1217

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
FB|FBgn0250910	1256	Octbeta3R "Octbeta3R" [Drosoph	0.945	0.054	0.619	1.4e-19
FB|FBgn0038980	508	oa2 "octopamine receptor 2" [D	0.794	0.114	0.627	5.8e-16
FB|FBgn0038063	536	Octbeta2R "Octbeta2R" [Drosoph	0.849	0.115	0.590	2.9e-15
ZFIN|ZDB-GENE-021010-4	408	adra2da "adrenergic, alpha-2D-	0.698	0.125	0.490	4.5e-10
UNIPROTKB|F1NAZ2	422	HTR1A "Uncharacterized protein	0.739	0.127	0.444	1e-09
MGI|MGI:96273	421	Htr1a "5-hydroxytryptamine (se	0.739	0.128	0.462	1.7e-09
ZFIN|ZDB-GENE-021010-5	415	adra2db "adrenergic, alpha-2D-	0.698	0.122	0.450	2.7e-09
ZFIN|ZDB-GENE-071203-1	398	htr1aa "5-hydroxytryptamine (s	0.698	0.128	0.5	3.2e-09
ZFIN|ZDB-GENE-021010-2	510	adra2b "adrenergic, alpha-2B-,	0.698	0.1	0.490	4.9e-09
UNIPROTKB|F1NBV5	344	ADRA2B "Uncharacterized protei	0.712	0.151	0.461	5e-09

FB|FBgn0250910 Octbeta3R "Octbeta3R" [Drosophila melanogaster (taxid:7227)]

 Score = 247 (92.0 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 44/71 (61%), Positives = 54/71 (76%)

Query:     3 YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFS 62
             Y+I++LCGP C CP+ +V +LFWIGYFNS LNPL+YAYFNRDFREAF+NTL  V P C  
Sbjct:  1188 YVITSLCGPACPCPDVLVVVLFWIGYFNSTLNPLIYAYFNRDFREAFRNTLECVLP-CLE 1246

Query:    63 CFKNAHTLSYV 73
               +N +   YV
Sbjct:  1247 K-RNPYNAYYV 1256

GO:0016021 "integral to membrane" evidence=ISS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS

GO:0008227 "G-protein coupled amine receptor activity" evidence=ISS

GO:0004989 "octopamine receptor activity" evidence=IDA

FB|FBgn0038980 oa2 "octopamine receptor 2" [Drosophila melanogaster (taxid:7227)]

 Score = 207 (77.9 bits), Expect = 5.8e-16, P = 5.8e-16
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query:     3 YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCF 61
             Y++S+LC   C  P  +V ILFWIGYFNS LNP++YAYFNRDFR AFK TL  +FP+ F
Sbjct:   370 YIVSSLCDS-CITPRLLVGILFWIGYFNSALNPIIYAYFNRDFRAAFKKTLKSLFPYAF 427

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0008227 "G-protein coupled amine receptor activity" evidence=ISS

GO:0071875 "adrenergic receptor signaling pathway" evidence=IEA

GO:0004935 "adrenergic receptor activity" evidence=IEA

GO:0007188 "adenylate cyclase-modulating G-protein coupled receptor signaling pathway" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=IC

GO:0004989 "octopamine receptor activity" evidence=IDA

GO:0051482 "elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway" evidence=IDA

GO:0045886 "negative regulation of synaptic growth at neuromuscular junction" evidence=IMP

FB|FBgn0038063 Octbeta2R "Octbeta2R" [Drosophila melanogaster (taxid:7227)]

 Score = 201 (75.8 bits), Expect = 2.9e-15, P = 2.9e-15
 Identities = 39/66 (59%), Positives = 49/66 (74%)

Query:     3 YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFS 62
             Y +S  C   C  P+ +V+ILFWIGYFNS LNPL+YAYFNRDFREAF+NTL  +F  C +
Sbjct:   431 YTLSMTC-EECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLCLF--C-N 486

Query:    63 CFKNAH 68
              +K+ H
Sbjct:   487 WWKDRH 492

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;ISS

GO:0008227 "G-protein coupled amine receptor activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0004989 "octopamine receptor activity" evidence=IDA

GO:0045887 "positive regulation of synaptic growth at neuromuscular junction" evidence=IMP

ZFIN|ZDB-GENE-021010-4 adra2da "adrenergic, alpha-2D-, receptor a" [Danio rerio (taxid:7955)]

 Score = 151 (58.2 bits), Expect = 4.5e-10, P = 4.5e-10
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query:     3 YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
             Y +  +CG  C  PE +  + FWIGY NS +NP++Y  FNRDFR+AFK  +
Sbjct:   351 YSLQAVCGERCGPPEALFKLFFWIGYCNSSVNPIIYTIFNRDFRKAFKKVV 401

GO:0004935 "adrenergic receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0071875 "adrenergic receptor signaling pathway" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IC;ISS

GO:0007194 "negative regulation of adenylate cyclase activity" evidence=IDA

GO:0004938 "alpha2-adrenergic receptor activity" evidence=ISS;IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NAZ2 HTR1A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 148 (57.2 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 24/54 (44%), Positives = 36/54 (66%)

Query:     4 LISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF 57
             L+   C   C  PE++  ++ W+GY NS+LNP++YAYFN+DF+ AFK  +   F
Sbjct:   366 LVLPFCDSKCYMPEWLGAVINWLGYSNSLLNPIIYAYFNKDFQSAFKKIIKCKF 419

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0004993 "serotonin receptor activity" evidence=IEA

MGI|MGI:96273 Htr1a "5-hydroxytryptamine (serotonin) receptor 1A" [Mus musculus (taxid:10090)]

 Score = 146 (56.5 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 25/54 (46%), Positives = 35/54 (64%)

Query:     4 LISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF 57
             L+   C   C  PE +  I+ W+GY NS+LNP++YAYFN+DF+ AFK  +   F
Sbjct:   366 LVLPFCESSCHMPELLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKF 419

GO:0001965 "G-protein alpha-subunit binding" evidence=ISO

GO:0004871 "signal transducer activity" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0004993 "serotonin receptor activity" evidence=ISO;IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007198 "adenylate cyclase-inhibiting serotonin receptor signaling pathway" evidence=ISO

GO:0007210 "serotonin receptor signaling pathway" evidence=ISO;IDA

GO:0007610 "behavior" evidence=IEA

GO:0008144 "drug binding" evidence=ISO

GO:0008283 "cell proliferation" evidence=IEA

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030815 "negative regulation of cAMP metabolic process" evidence=IEA

GO:0031117 "positive regulation of microtubule depolymerization" evidence=ISO

GO:0042221 "response to chemical stimulus" evidence=IEA

GO:0042310 "vasoconstriction" evidence=IEA

GO:0043025 "neuronal cell body" evidence=ISO

GO:0043203 "axon hillock" evidence=ISO

GO:0046883 "regulation of hormone secretion" evidence=IEA

GO:0050795 "regulation of behavior" evidence=IEA

GO:0051378 "serotonin binding" evidence=ISO

GO:0060259 "regulation of feeding behavior" evidence=ISO

GO:0097114 "N-methyl-D-aspartate receptor clustering" evidence=ISO

GO:0097458 "neuron part" evidence=IEA

ZFIN|ZDB-GENE-021010-5 adra2db "adrenergic, alpha-2D-, receptor b" [Danio rerio (taxid:7955)]

 Score = 144 (55.7 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 23/51 (45%), Positives = 33/51 (64%)

Query:     3 YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
             Y +  +C   C  P+ +  + FWIGY NS +NP++Y  FNRDFR+AFK  +
Sbjct:   358 YSLHAICRKSCTIPDSLFNLFFWIGYCNSSVNPIIYTIFNRDFRKAFKKIM 408

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0071875 "adrenergic receptor signaling pathway" evidence=IEA

GO:0004935 "adrenergic receptor activity" evidence=IEA

GO:0004938 "alpha2-adrenergic receptor activity" evidence=IEA;ISS;IDA

GO:0005887 "integral to plasma membrane" evidence=IC;ISS

GO:0007194 "negative regulation of adenylate cyclase activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

ZFIN|ZDB-GENE-071203-1 htr1aa "5-hydroxytryptamine (serotonin) receptor 1A a" [Danio rerio (taxid:7955)]

 Score = 143 (55.4 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 27/54 (50%), Positives = 38/54 (70%)

Query:     3 YLISTLCGPPC-DC--PEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
             + I  L  P C DC  PE++  ++ W+GY NS+LNP++YAYFN+DF+ AFK  L
Sbjct:   338 FFIVALVLPFCQDCFMPEWLGAVINWLGYSNSLLNPVIYAYFNKDFQNAFKKIL 391

GO:0042221 "response to chemical stimulus" evidence=IEA

GO:0050795 "regulation of behavior" evidence=IEA

GO:0004993 "serotonin receptor activity" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007610 "behavior" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0042310 "vasoconstriction" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0097458 "neuron part" evidence=IEA

GO:0030815 "negative regulation of cAMP metabolic process" evidence=IEA

GO:0046883 "regulation of hormone secretion" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

ZFIN|ZDB-GENE-021010-2 adra2b "adrenergic, alpha-2B-, receptor" [Danio rerio (taxid:7955)]

 Score = 143 (55.4 bits), Expect = 4.9e-09, P = 4.9e-09
 Identities = 25/51 (49%), Positives = 31/51 (60%)

Query:     3 YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
             Y +  +C   C  PE +    FWIGY NS LNP++Y  FN+DFR AFK  L
Sbjct:   451 YSLQAVCPESCALPEPLFKFFFWIGYCNSCLNPVIYTIFNKDFRRAFKKIL 501

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0071875 "adrenergic receptor signaling pathway" evidence=IEA

GO:0004935 "adrenergic receptor activity" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;ISS

GO:0007194 "negative regulation of adenylate cyclase activity" evidence=IDA

GO:0004938 "alpha2-adrenergic receptor activity" evidence=IDA

GO:0004936 "alpha-adrenergic receptor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NBV5 ADRA2B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 140 (54.3 bits), Expect = 5.0e-09, P = 5.0e-09
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query:     3 YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLS 54
             Y +  +CG  C   + + +  FWIGY NS LNP++Y  FNRDFR AF+  L+
Sbjct:   288 YSLEAVCGEGCRVSKPLFSFFFWIGYCNSSLNPIIYTVFNRDFRAAFRRLLA 339

GO:0004935 "adrenergic receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q18775	DOPR4_CAEEL	No assigned EC number	0.5526	0.5205	0.0735	yes	N/A
Q4LBB6	OCTB3_DROME	No assigned EC number	0.7142	0.7671	0.0445	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	73
KOG4220|consensus	503		99.29
PHA03234	338	DNA packaging protein UL33; Provisional	99.11
PHA02834	323	chemokine receptor-like protein; Provisional	98.84
KOG4219|consensus	423		98.77
PHA03235	409	DNA packaging protein UL33; Provisional	98.76
PHA02638	417	CC chemokine receptor-like protein; Provisional	98.76
PHA03087	335	G protein-coupled chemokine receptor-like protein;	98.66
KOG2087|consensus	363		98.01
PF10324	318	7TM_GPCR_Srw: Serpentine type 7TM GPCR chemorecept	97.52
PF00001	257	7tm_1: 7 transmembrane receptor (rhodopsin family)	96.69
PF10320	257	7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemorecep	95.71
PF10321	313	7TM_GPCR_Srt: Serpentine type 7TM GPCR chemorecept	95.06
PF10323	283	7TM_GPCR_Srv: Serpentine type 7TM GPCR chemorecept	90.64
KOG4564|consensus	473		84.18
PF05296	303	TAS2R: Mammalian taste receptor protein (TAS2R); I	83.58

>KOG4220|consensus

Probab=99.29  E-value=1.7e-12  Score=83.74  Aligned_cols=57  Identities=39%  Similarity=0.734  Sum_probs=50.9

Q ss_pred             CeeeeccccCCCCCCcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcccCc
Q psy9050           1 MGYLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPW   59 (73)
Q Consensus         1 v~~~~~~~~~~~c~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~   59 (73)
                      |+.++..|| ++| +|.+++.+..||.|+||.+||++|++-|+.||+.+++++.|+...
T Consensus       435 ImVlv~tFC-~~C-iP~tlW~~gYwLCYINSTiNP~CYALCNatFrkTfk~lL~Cr~~~  491 (503)
T KOG4220|consen  435 IMVLVNTFC-KNC-IPETLWTFGYWLCYINSTINPLCYALCNATFRKTFKRLLLCRWKK  491 (503)
T ss_pred             eeeehHhhc-ccc-cchhHhhhhhheeeecccccHHHHHHHhHHHHHHHHHhheeeecc
Confidence            456677899 577 699999999999999999999999999999999999999887653

>PHA03234 DNA packaging protein UL33; Provisional

Probab=99.11  E-value=1.8e-10  Score=72.94  Aligned_cols=39  Identities=26%  Similarity=0.411  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcc
Q psy9050          18 YIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFV   56 (73)
Q Consensus        18 ~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~   56 (73)
                      ..+.++.+++++|||+||+||++.+++||+++++.++..
T Consensus       279 ~~~~v~~~La~~nsclNPiIY~f~~~~FR~~~~~~~~~~  317 (338)
T PHA03234        279 ILQIIIRLMPEIHCFSNPLVYAFTGGDFRLRFTACFQDF  317 (338)
T ss_pred             HHHHHHHHHHHhhhhhhHHHHHHhhHHHHHHHHHHHHHH
Confidence            446788899999999999999999999999999877543

>PHA02834 chemokine receptor-like protein; Provisional

Probab=98.84  E-value=5e-09  Score=65.77  Aligned_cols=36  Identities=28%  Similarity=0.692  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhc
Q psy9050          20 VTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF   55 (73)
Q Consensus        20 ~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~   55 (73)
                      ..++.+++++|||+||+||++.+++||+++++++++
T Consensus       274 ~~i~~~l~~~ns~iNPiIY~~~~~~fR~~~~~~~~~  309 (323)
T PHA02834        274 IDIAELISFVHCCVNPIIYAFVGKNFKKVFKNMFCR  309 (323)
T ss_pred             HHHHHHHHHhhccccHHHHHHhcHHHHHHHHHHHHh
Confidence            457788999999999999999999999999998854

>KOG4219|consensus

Probab=98.77  E-value=9e-09  Score=66.45  Aligned_cols=37  Identities=22%  Similarity=0.786  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcc
Q psy9050          20 VTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFV   56 (73)
Q Consensus        20 ~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~   56 (73)
                      +....||+..|+|+||+||++.|++||.++++.++++
T Consensus       300 yl~~~WLaMSst~yNPiIY~~lN~Rfr~gf~~~fr~c  336 (423)
T KOG4219|consen  300 YLAIYWLAMSSTCYNPIIYCFLNKRFRGGFRRAFRWC  336 (423)
T ss_pred             HHHHHHHHHHHhhhccHhhhhhHHHHHHHHhhhhhee
Confidence            5567799999999999999999999999999999875

>PHA03235 DNA packaging protein UL33; Provisional

Probab=98.76  E-value=2.1e-08  Score=65.11  Aligned_cols=38  Identities=24%  Similarity=0.527  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhc
Q psy9050          18 YIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF   55 (73)
Q Consensus        18 ~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~   55 (73)
                      .+..++.+++++|||+||+||++.+++||+++++.++.
T Consensus       286 ~~~~i~~~La~~ns~lNPiIY~~~~~~FRk~~~~~l~~  323 (409)
T PHA03235        286 AVSTLSRLVPNLHCLLNPILYAFLGNDFLKRFRQCFRG  323 (409)
T ss_pred             HHHHHHHHHHHHHHhHhHHHHHHhhHHHHHHHHHHHhh
Confidence            45567888999999999999999999999999987754

>PHA02638 CC chemokine receptor-like protein; Provisional

Probab=98.76  E-value=2.4e-08  Score=64.92  Aligned_cols=39  Identities=21%  Similarity=0.392  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhccc
Q psy9050          19 IVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF   57 (73)
Q Consensus        19 ~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~   57 (73)
                      ...++..++++|||+||++|++.+++||+++++.+++..
T Consensus       361 ~~~vt~~la~~~sclNPiIY~f~~~~FR~~l~~~~~~~~  399 (417)
T PHA02638        361 AMMLAEAISLTHCCINPLIYTLIGENFRMHLLMIFRNIF  399 (417)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHhCHHHHHHHHHHHHHhc
Confidence            456778899999999999999999999999999886443

>PHA03087 G protein-coupled chemokine receptor-like protein; Provisional

Probab=98.66  E-value=6.3e-08  Score=60.66  Aligned_cols=39  Identities=26%  Similarity=0.490  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhccc
Q psy9050          19 IVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF   57 (73)
Q Consensus        19 ~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~   57 (73)
                      ...++.+++.+|+++||+||++++++||+++++.++...
T Consensus       287 ~~~i~~~l~~~ns~~NPiIY~~~~~~fr~~~~~~~~~~~  325 (335)
T PHA03087        287 ALHVTEIISLSHCCINPLIYAFVSEFFNKHKKKSLKLMF  325 (335)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHcCHHHHHHHHHHHHHHh
Confidence            345777889999999999999999999999999886443

>KOG2087|consensus

Probab=98.01  E-value=3.1e-06  Score=54.27  Aligned_cols=30  Identities=43%  Similarity=0.594  Sum_probs=25.9

Q ss_pred             HHHhhhhhHHHHHhhcHHHHHHHHHHhhcc
Q psy9050          27 GYFNSVLNPLMYAYFNRDFREAFKNTLSFV   56 (73)
Q Consensus        27 ~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~   56 (73)
                      --+|||+||++|++.++.||+.++.+....
T Consensus       278 lPlns~~NP~LYa~fT~~fk~d~~~l~~k~  307 (363)
T KOG2087|consen  278 LPLNSCLNPFLYAFFTPVFKEDLFLLLSKV  307 (363)
T ss_pred             EEcccccCchhHHHcCHHHHHHHHHHHhhc
Confidence            347999999999999999999999877543

>PF10324 7TM_GPCR_Srw: Serpentine type 7TM GPCR chemoreceptor Srw; InterPro: IPR019427 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=97.52  E-value=0.00025  Score=44.32  Aligned_cols=39  Identities=13%  Similarity=0.261  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcc
Q psy9050          18 YIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFV   56 (73)
Q Consensus        18 ~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~   56 (73)
                      ....+...+..+|+..|++||.+++.+||++++++++++
T Consensus       280 ~~~~~~~~l~~~ns~~h~~ic~~mSsqYR~t~~~~f~~k  318 (318)
T PF10324_consen  280 QLSIIFNILITINSSIHFFICCFMSSQYRKTVKKLFGCK  318 (318)
T ss_pred             HHHHHHHHHHHHHhhhHHHhhhhhhHHHHHHHHHHhccC
Confidence            445677889999999999999999999999999999753

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class w (Srw), which is a solo family amongst the superfamilies of chemoreceptors. The genes encoding Srw do not appear to be under as strong an adaptive evolutionary pressure as those of Srz [].

>PF00001 7tm_1: 7 transmembrane receptor (rhodopsin family) Rhodopsin-like GPCR superfamily signature 5-hydroxytryptamine 7 receptor signature bradykinin receptor signature gastrin receptor signature melatonin receptor signature olfactory receptor signature; InterPro: IPR000276 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=96.69  E-value=0.0025  Score=37.39  Aligned_cols=24  Identities=29%  Similarity=0.768  Sum_probs=21.6

Q ss_pred             CcHHHHHHHHHHHHHhhhhhHHHH
Q psy9050          15 CPEYIVTILFWIGYFNSVLNPLMY   38 (73)
Q Consensus        15 ~~~~~~~~~~~l~~~ns~~NPiiY   38 (73)
                      .......++.+++++||++||++|
T Consensus       234 ~~~~~~~~~~~l~~~~s~~nP~iY  257 (257)
T PF00001_consen  234 ISSILFYISYFLAFLNSCLNPIIY  257 (257)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhhCcEEC
Confidence            467778899999999999999998

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The rhodopsin-like GPCRs themselves represent a widespread protein family that includes hormone, neurotransmitter and light receptors, all of which transduce extracellular signals through interaction with guanine nucleotide-binding (G) proteins. Although their activating ligands vary widely in structure and character, the amino acid sequences of the receptors are very similar and are believed to adopt a common structural framework comprising 7 transmembrane (TM) helices [, , ].; GO: 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 2KI9_A 3QAK_A 2YDV_A 3VGA_A 3PWH_A 3RFM_A 3EML_A 3VG9_A 3REY_A 3UZA_A ....

>PF10320 7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemoreceptor Srsx; InterPro: IPR019424 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=95.71  E-value=0.0087  Score=36.82  Aligned_cols=35  Identities=17%  Similarity=0.239  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHh
Q psy9050          19 IVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL   53 (73)
Q Consensus        19 ~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~   53 (73)
                      +.....+++.++.+.|-++|.++++|||+++++++
T Consensus       223 i~~~~~i~v~~~~s~~ffV~~~~S~EYR~af~~~~  257 (257)
T PF10320_consen  223 IQMYAGIFVNISYSQNFFVYYWRSSEYRKAFRELF  257 (257)
T ss_pred             HHHHHHHHHHHHHHHHheEEEEcCHHHHHHHHHhC
Confidence            44556678899999999999999999999999863

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class sx (Srsx), which is a solo family amongst the superfamilies of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' [].

>PF10321 7TM_GPCR_Srt: Serpentine type 7TM GPCR chemoreceptor Srt; InterPro: IPR019425 Chemoreception is mediated in Caenorhabditis elegans by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs) of proteins which are of the serpentine type []

Probab=95.06  E-value=0.019  Score=36.62  Aligned_cols=42  Identities=19%  Similarity=0.248  Sum_probs=35.6

Q ss_pred             CcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcc
Q psy9050          15 CPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFV   56 (73)
Q Consensus        15 ~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~   56 (73)
                      .+.++..++...--+++..+|+||-..|+..|++++++++.+
T Consensus       267 ~p~~~i~~~~~~Wql~~g~~~iIYl~lNrtIR~~~~k~~~~k  308 (313)
T PF10321_consen  267 PPPWLIIIGQISWQLSHGCPPIIYLTLNRTIRNSVLKMLGPK  308 (313)
T ss_pred             ccHHHHHHHHHHHhccCCccceEEEEECHHHHHHHHHHHccc
Confidence            356667777777788999999999999999999999998643

Srt is a member of the Srg superfamily of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' [].

>PF10323 7TM_GPCR_Srv: Serpentine type 7TM GPCR chemoreceptor Srv; InterPro: IPR019426 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=90.64  E-value=0.44  Score=29.82  Aligned_cols=34  Identities=26%  Similarity=0.427  Sum_probs=28.3

Q ss_pred             HHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhc
Q psy9050          22 ILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF   55 (73)
Q Consensus        22 ~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~   55 (73)
                      +.-.+..+.|.+||+.--+.|++.|+++++.++|
T Consensus       250 ~y~~~~~~~s~inP~~LLi~n~~lr~~~~~~~~~  283 (283)
T PF10323_consen  250 FYPILNGLLSFINPWMLLIFNKDLRKQVRRMLKC  283 (283)
T ss_pred             HHHHHHHHHHhhhhHHhhhccHHHHHHHHHHcCC
Confidence            3344566778999999999999999999998865

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class v (Srv) from the Srg superfamily [, ]. Srg receptors contain seven hydrophobic, putative transmembrane, regions and can be distinguished from other 7TM GPCR receptors by their own characteristic TM signatures.

>KOG4564|consensus

Probab=84.18  E-value=2.4  Score=28.89  Aligned_cols=35  Identities=14%  Similarity=0.507  Sum_probs=27.2

Q ss_pred             HHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhh
Q psy9050          20 VTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLS   54 (73)
Q Consensus        20 ~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~   54 (73)
                      ..+...|..+.-.+=-++|+|.|++.|.++|+...
T Consensus       384 ~~~~~~L~SfQGf~VAvlYCFlN~EVq~elrr~W~  418 (473)
T KOG4564|consen  384 LYFELFLGSFQGFFVAVLYCFLNGEVQAELRRKWS  418 (473)
T ss_pred             HHHHHHHHhccchheehheeecCHHHHHHHHHHHH
Confidence            34555566666667789999999999999999654

>PF05296 TAS2R: Mammalian taste receptor protein (TAS2R); InterPro: IPR007960 This family consists of several forms of mammalian taste receptor proteins (TAS2Rs)

Probab=83.58  E-value=4.1  Score=25.85  Aligned_cols=37  Identities=14%  Similarity=-0.009  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhc
Q psy9050          19 IVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF   55 (73)
Q Consensus        19 ~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~   55 (73)
                      ...+......+.+...|++-.+.|++.|+++++.+.+
T Consensus       265 ~~~~~~~i~~~yps~hs~iLIlgn~KLr~~~~~il~~  301 (303)
T PF05296_consen  265 WFWVCEIIIALYPSGHSIILILGNPKLRQALLKILWC  301 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhh
Confidence            3455666778888999999999999999999998864

TAS2Rs are G protein-coupled receptors expressed in subsets of taste receptor cells of the tongue and palate epithelia and are organised in the genome in clusters. The proteins are genetically linked to loci that influence bitter perception in mice and humans [].; GO: 0004930 G-protein coupled receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0050909 sensory perception of taste, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	73
3pbl_A	481	Structure Of The Human Dopamine D3 Receptor In Comp		1e-04
3rze_A	452	Structure Of The Human Histamine H1 Receptor In Com		2e-04
2y00_B	315	Turkey Beta1 Adrenergic Receptor With Stabilising M		4e-04
2vt4_A	313	Turkey Beta1 Adrenergic Receptor With Stabilising M		4e-04

>pdb|3PBL|A Chain A, Structure Of The Human Dopamine D3 Receptor In Complex With Eticlopride Length = 481

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 1   MGYLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLS 54
           + ++++T C   C     + +   W+GY NS LNP++Y  FN +FR+AF   LS
Sbjct: 419 LTHVLNTHC-QTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILS 471

>pdb|3RZE|A Chain A, Structure Of The Human Histamine H1 Receptor In Complex With Doxepin Length = 452

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 15  CPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
           C E++     W+GY NS LNPL+Y   N +F++ FK  L
Sbjct: 403 CNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRIL 441

>pdb|2Y00|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising Mutations And Bound Partial Agonist Dobutamine (Crystal Dob92) Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 16  PEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF 55
           P+++     W+GY NS +NP++Y   + DFR+AFK  L+F
Sbjct: 263 PDWLFVAFNWLGYANSAMNPIIYCR-SPDFRKAFKRLLAF 301

>pdb|2VT4|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising Mutations And Bound Cyanopindolol Length = 313

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 16  PEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF 55
           P+++     W+GY NS +NP++Y   + DFR+AFK  L+F
Sbjct: 261 PDWLFVAFNWLGYANSAMNPIIYCR-SPDFRKAFKRLLAF 299

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	73
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	4e-16
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	2e-15
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	1e-14
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	1e-14
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	2e-14
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	4e-14
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	4e-14
2rh1_A	500	Beta-2-adrenergic receptor/T4-lysozyme chimera; GP	1e-13
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	2e-12
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	1e-06
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	5e-06
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	3e-05
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	8e-05
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	3e-04

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, protein structure initiative, AC technologies center for gene to 3D structure; HET: ETQ MAL; 2.89A {Homo sapiens} Length = 481

 Score = 69.4 bits (169), Expect = 4e-16
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF 55
           ++++T C   C     + +   W+GY NS LNP++Y  FN +FR+AF   LS 
Sbjct: 421 HVLNTHC-QTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC 472

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A* Length = 488

 Score = 67.8 bits (165), Expect = 2e-15
 Identities = 14/53 (26%), Positives = 27/53 (50%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF 55
              +  C      P +++ +   + + NSV+NP +YAY  R+FR+ F+  +  
Sbjct: 415 NCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS 467

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A Length = 447

 Score = 65.9 bits (160), Expect = 1e-14
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLS 54
              +  C      P +++ +   + + NSV+NP +YAY  R+FR+ F+  + 
Sbjct: 374 NCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIR 425

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A Length = 514

 Score = 65.3 bits (159), Expect = 1e-14
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF 55
            ++  +        + +  +L WIGY NS  NPL+Y   + DFR AF+  L  
Sbjct: 442 NIVHVIQ--DNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL 491

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A* Length = 467

 Score = 65.1 bits (158), Expect = 2e-14
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
            LI+T C      P  + TI +W+ Y NS +NP  YA  N  F++ FK+ L
Sbjct: 408 VLINTFC--APCIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLL 456

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A* Length = 520

 Score = 64.1 bits (155), Expect = 4e-14
 Identities = 12/60 (20%), Positives = 20/60 (33%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFS 62
            L+   C        +       +   NS  NP++Y   N++ R AF   +       F 
Sbjct: 441 LLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPLEVLFQ 500

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens} Length = 452

 Score = 63.9 bits (155), Expect = 4e-14
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
           +++   C     C E++     W+GY NS LNPL+Y   N +F++ FK  L
Sbjct: 393 FMVIAFC--KNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRIL 441

>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A* Length = 500

 Score = 62.8 bits (152), Expect = 1e-13
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 3   YLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
            ++  +        + +  +L WIGY NS  NPL+Y   + DFR AF+  L
Sbjct: 428 NIVHVIQ--DNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELL 475

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A* Length = 315

 Score = 59.0 bits (143), Expect = 2e-12
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 3   YLISTLCGPPCDC--PEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF 55
           + +  +         P+++     W+GY NS +NP++Y   + DFR+AFK  L+F
Sbjct: 248 FFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF 301

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A Length = 364

 Score = 42.7 bits (101), Expect = 1e-06
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 4/46 (8%)

Query: 18  YIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWCFSC 63
            +   + W+   +++ NP++Y   N  FR  FK+     F  C   
Sbjct: 285 QVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKH----AFRCCPFI 326

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A* Length = 464

 Score = 38.8 bits (90), Expect = 3e-05
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 4   LISTLCGPPCDCPEYIV-TILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
           +I  L   P    + +       +GY NS LNP++YA+ + +F+  F+   
Sbjct: 404 IIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFC 454

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A* Length = 448

 Score = 37.6 bits (87), Expect = 8e-05
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 10  GPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWC 60
           GP      Y   +       +++ NP++Y+  +  FREA   T  +V   C
Sbjct: 287 GPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCC 337

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B* Length = 502

 Score = 36.4 bits (84), Expect = 3e-04
 Identities = 9/36 (25%), Positives = 21/36 (58%)

Query: 18  YIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
             ++I   + +F+  LNP++YA+    F+ + ++ L
Sbjct: 456 KWISITEALAFFHCCLNPILYAFLGAKFKTSAQHAL 491

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	73
2koe_A	40	Human cannabinoid receptor 1 - helix 7/8 peptide;	99.39
4grv_A	510	Neurotensin receptor type 1, lysozyme chimera; G-p	99.38
2rh1_A	500	Beta-2-adrenergic receptor/T4-lysozyme chimera; GP	99.26
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	99.21
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	99.19
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	99.16
2lnl_A	296	C-X-C chemokine receptor type 1; G protein coupled	99.16
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	99.09
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	99.09
3vw7_A	484	Proteinase-activated receptor 1, lysozyme; high re	99.07
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	98.99
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	98.98
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	98.97
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	98.95
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	98.93
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	98.83
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	98.8
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	98.7
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	98.69

>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}

Probab=99.39  E-value=5.4e-14  Score=63.32  Aligned_cols=37  Identities=27%  Similarity=0.555  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhc
Q psy9050          19 IVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF   55 (73)
Q Consensus        19 ~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~   55 (73)
                      ++.++.+++++||++||+||++.+++||+++++++++
T Consensus         2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~   38 (40)
T 2koe_A            2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPS   38 (40)
T ss_dssp             HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhh
Confidence            4567888999999999999999999999999987753

>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}

Probab=99.38  E-value=1.4e-14  Score=93.39  Aligned_cols=40  Identities=28%  Similarity=0.591  Sum_probs=28.6

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhccc
Q psy9050          18 YIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF   57 (73)
Q Consensus        18 ~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~   57 (73)
                      .++.++.+|+|+|||+||+||+++|++||++++++++|+.
T Consensus       450 ~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~C~C  489 (510)
T 4grv_A          450 YFYMLTNALAYASSAINPILYNLVSANFRQVFLSTLACLC  489 (510)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC---------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Confidence            4566888999999999999999999999999999997643

>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*

Probab=99.26  E-value=2.5e-12  Score=82.57  Aligned_cols=49  Identities=35%  Similarity=0.560  Sum_probs=40.0

Q ss_pred             ccccCCCCCCcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhccc
Q psy9050           6 STLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF   57 (73)
Q Consensus         6 ~~~~~~~c~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~   57 (73)
                      ..+|  .+..+..++.+..+|+++||++||+||++ +++||++++++++++.
T Consensus       431 ~~~~--~~~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~~~  479 (500)
T 2rh1_A          431 HVIQ--DNLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCLRR  479 (500)
T ss_dssp             HHHS--TTSSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC--
T ss_pred             HHHc--CCcccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhhhc
Confidence            3455  33467788899999999999999999996 9999999999996543

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*

Probab=99.21  E-value=1.1e-11  Score=78.30  Aligned_cols=47  Identities=28%  Similarity=0.519  Sum_probs=40.9

Q ss_pred             CCcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcccCcc
Q psy9050          14 DCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFPWC   60 (73)
Q Consensus        14 ~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~   60 (73)
                      .....+..++.+++++||++||+||++++++||+++++++++...+.
T Consensus       426 ~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~~~~  472 (488)
T 3eml_A          426 HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ  472 (488)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTSCC
T ss_pred             cccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhccccc
Confidence            45677788899999999999999999999999999999998765443

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A

Probab=99.19  E-value=1.2e-11  Score=77.47  Aligned_cols=45  Identities=29%  Similarity=0.572  Sum_probs=39.4

Q ss_pred             CCcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcccC
Q psy9050          14 DCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP   58 (73)
Q Consensus        14 ~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~   58 (73)
                      ..+..+..++.+++++||++||+||++++++||+++++++++...
T Consensus       385 ~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~  429 (447)
T 4eiy_A          385 HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL  429 (447)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC-
T ss_pred             ccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHHh
Confidence            456677888999999999999999999999999999999976554

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}

Probab=99.16  E-value=2.2e-11  Score=76.98  Aligned_cols=48  Identities=40%  Similarity=0.762  Sum_probs=40.7

Q ss_pred             CCCCCcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcccC
Q psy9050          11 PPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP   58 (73)
Q Consensus        11 ~~c~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~   58 (73)
                      +.+.....++.++.+++++||++||+||++++++||++++++++|..+
T Consensus       428 ~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~  475 (481)
T 3pbl_A          428 QTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCGRP  475 (481)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC---
T ss_pred             ccccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhccCc
Confidence            355667888889999999999999999999999999999999976543

>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}

Probab=99.16  E-value=2e-11  Score=73.42  Aligned_cols=39  Identities=28%  Similarity=0.640  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcc
Q psy9050          18 YIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFV   56 (73)
Q Consensus        18 ~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~   56 (73)
                      ..+.++.+++++||++||+||++++++||++++++++|+
T Consensus       257 ~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~cr  295 (296)
T 2lnl_A          257 RALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMH  295 (296)
T ss_dssp             HHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCC
Confidence            345678889999999999999999999999999999763

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*

Probab=99.09  E-value=5.1e-11  Score=74.97  Aligned_cols=44  Identities=36%  Similarity=0.709  Sum_probs=37.3

Q ss_pred             CcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcccC
Q psy9050          15 CPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP   58 (73)
Q Consensus        15 ~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~   58 (73)
                      .+..+..++.+++++||++||+||++++++||++++++++|+.+
T Consensus       418 ~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~  461 (467)
T 3uon_A          418 IPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMCHYK  461 (467)
T ss_dssp             SCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC----
T ss_pred             cchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhcc
Confidence            46778889999999999999999999999999999999976543

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*

Probab=99.09  E-value=1.6e-11  Score=79.28  Aligned_cols=41  Identities=22%  Similarity=0.444  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcccC
Q psy9050          18 YIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP   58 (73)
Q Consensus        18 ~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~   58 (73)
                      ....++.+++++|||+||+||++++++||++++++++++..
T Consensus       456 ~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~  496 (520)
T 3v2y_A          456 FRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPLE  496 (520)
T ss_dssp             TSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCSCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhcc
Confidence            34556778999999999999999999999999999976554

>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}

Probab=99.07  E-value=1.8e-11  Score=77.44  Aligned_cols=42  Identities=12%  Similarity=0.256  Sum_probs=26.2

Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcccC
Q psy9050          17 EYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP   58 (73)
Q Consensus        17 ~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~   58 (73)
                      ..++.++.+++++||++||+||++++++||++++++++|+..
T Consensus       427 ~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~~~~~  468 (484)
T 3vw7_A          427 YFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCKES  468 (484)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHHHHTSSCC-------------
T ss_pred             HHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHhhccC
Confidence            455678889999999999999999999999999999876544

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...

Probab=98.99  E-value=1.7e-09  Score=65.70  Aligned_cols=45  Identities=27%  Similarity=0.417  Sum_probs=38.3

Q ss_pred             CCCcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhccc
Q psy9050          13 CDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF   57 (73)
Q Consensus        13 c~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~   57 (73)
                      ...+.....+..+++++||++||+||++++++||++++++++|..
T Consensus       282 ~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c~~  326 (349)
T 1u19_A          282 SDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGK  326 (349)
T ss_dssp             SCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSSC
T ss_pred             cccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcccC
Confidence            344566777888899999999999999999999999999986543

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A

Probab=98.98  E-value=2.2e-09  Score=65.84  Aligned_cols=41  Identities=22%  Similarity=0.588  Sum_probs=36.2

Q ss_pred             cHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcc
Q psy9050          16 PEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFV   56 (73)
Q Consensus        16 ~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~   56 (73)
                      ...++.+..+++++||++||+||++.+++||++++++++++
T Consensus       283 ~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~  323 (364)
T 2ks9_A          283 IQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCC  323 (364)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Confidence            45567778889999999999999999999999999998754

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*

Probab=98.97  E-value=6.2e-10  Score=69.87  Aligned_cols=40  Identities=28%  Similarity=0.549  Sum_probs=34.6

Q ss_pred             cHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhc
Q psy9050          16 PEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSF   55 (73)
Q Consensus        16 ~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~   55 (73)
                      ....+.++.+++++||++||+||++++++||+++++++++
T Consensus       417 ~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~~  456 (464)
T 4dkl_A          417 QTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP  456 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC-
T ss_pred             chhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhcc
Confidence            4556678888999999999999999999999999998643

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}

Probab=98.95  E-value=7.7e-10  Score=69.36  Aligned_cols=43  Identities=37%  Similarity=0.738  Sum_probs=35.6

Q ss_pred             cHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcccC
Q psy9050          16 PEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP   58 (73)
Q Consensus        16 ~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~   58 (73)
                      +..+..++.+++++||++||+||++++++||++++++++++..
T Consensus       404 ~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~  446 (452)
T 3rze_A          404 NEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRSG  446 (452)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC---
T ss_pred             cHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhccc
Confidence            3445668888999999999999999999999999999976543

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*

Probab=98.93  E-value=1.8e-09  Score=64.59  Aligned_cols=42  Identities=40%  Similarity=0.884  Sum_probs=34.9

Q ss_pred             CcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhccc
Q psy9050          15 CPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF   57 (73)
Q Consensus        15 ~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~   57 (73)
                      .+.....+..+++++||++||++|+ ++++||+++++++++..
T Consensus       262 ~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~  303 (315)
T 4amj_A          262 VPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPR  303 (315)
T ss_dssp             SCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC---
T ss_pred             chHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCC
Confidence            4566777888899999999999999 89999999999997544

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*

Probab=98.83  E-value=3.6e-10  Score=71.74  Aligned_cols=42  Identities=24%  Similarity=0.533  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhcccC
Q psy9050          17 EYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVFP   58 (73)
Q Consensus        17 ~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~   58 (73)
                      ..++.++.+++++||++||+||++++++||++++++++++.+
T Consensus       455 ~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~  496 (502)
T 3odu_A          455 HKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRP  496 (502)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCHHHHHSSCSS
T ss_pred             HHHHHHHHHHHHHhcccchhhhhhcCHHHHHHHHHHhccCCc
Confidence            344568888999999999999999999999999999976554

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*

Probab=98.70  E-value=1.2e-08  Score=65.65  Aligned_cols=42  Identities=40%  Similarity=0.691  Sum_probs=35.0

Q ss_pred             CcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhccc
Q psy9050          15 CPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF   57 (73)
Q Consensus        15 ~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~   57 (73)
                      .+..++.++.+++++||++||+||+ ++++||++++++++++.
T Consensus       452 ~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~  493 (514)
T 3sn6_R          452 IRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRR  493 (514)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC---
T ss_pred             cchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCc
Confidence            4566778888999999999999999 89999999999986543

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*

Probab=98.69  E-value=4.1e-08  Score=61.94  Aligned_cols=39  Identities=23%  Similarity=0.458  Sum_probs=34.6

Q ss_pred             cHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhh
Q psy9050          16 PEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLS   54 (73)
Q Consensus        16 ~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~   54 (73)
                      ......+..+++++||++||+||.+++++||++++++++
T Consensus       293 ~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~  331 (448)
T 2z73_A          293 TPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP  331 (448)
T ss_dssp             CHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCG
T ss_pred             ChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHH
Confidence            455667778899999999999999999999999999885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	73
d1u19a_	348	f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId:	3e-05

>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]} Length = 348

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.0 bits (87), Expect = 3e-05
 Identities = 13/53 (24%), Positives = 20/53 (37%)

Query: 1   MGYLISTLCGPPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTL 53
            G           D     +TI  +    ++V NP++Y   N+ FR     TL
Sbjct: 269 AGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTL 321

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	73
d1u19a_	348	Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}	99.1

>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.10  E-value=1.6e-10  Score=68.98  Aligned_cols=47  Identities=26%  Similarity=0.386  Sum_probs=40.2

Q ss_pred             CCCCCcHHHHHHHHHHHHHhhhhhHHHHHhhcHHHHHHHHHHhhccc
Q psy9050          11 PPCDCPEYIVTILFWIGYFNSVLNPLMYAYFNRDFREAFKNTLSFVF   57 (73)
Q Consensus        11 ~~c~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~   57 (73)
                      +..........++.+++++||++||+||++++++||++++++++|..
T Consensus       279 ~~~~~~~~~~~~~~~l~~~ns~iNPiIY~~~~~~fR~~~~~~l~c~~  325 (348)
T d1u19a_         279 QGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGK  325 (348)
T ss_dssp             TTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSSC
T ss_pred             CCccccHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCC
Confidence            34455667778888999999999999999999999999999987544