Psyllid ID: psy906

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80----
Protein Sequence
MEKAGLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK
Secondary Structure (PSIPRED)
ccccccccccccEEEEcccccccccEEEEEEEcHHHHHHHHHHHHcccccccHHccccccccEEEEEEHHHHHHcHHccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHcccEEEEccHHHHHccccEEEEEccHHHHHHHHHHHccccccccHHHHHHHcccEEEEEEHHHHcccEHHHHHHHH
Coil and Loop (DISEMBL)
mekaglvkiprtekslyssssphfsQVMILITGSHKAFALYKAIEEGVNHMWTvsafqmhpctimicdedaTQELRVKTVKYFK
Flexible Loop (DISEMBL)
mekaglvkiprtekslyssssphFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK
Low Complexity Region (SEG)
MEKAGLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK
Disordered region (IsUnstruct)
***********************FSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTV****
Disordered Region (DISOPRED)
***AGLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK
Disordered Region (DISEMBL)
MEKAGLVKIPRTE********PHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK
Disordered Region (DISPRO)
****GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEKAGLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	84	2.2.26 [Sep-21-2011]
Q5TNH5	273	Glucosamine-6-phosphate i	yes	N/A	0.916	0.282	0.714	4e-26
Q8TDQ7	276	Glucosamine-6-phosphate i	yes	N/A	0.940	0.286	0.696	5e-26
Q17QL1	276	Glucosamine-6-phosphate i	yes	N/A	0.940	0.286	0.696	6e-26
Q16HW7	278	Glucosamine-6-phosphate i	N/A	N/A	0.916	0.276	0.714	6e-26
Q6PA43	275	Glucosamine-6-phosphate i	N/A	N/A	0.940	0.287	0.696	9e-26
Q9VMP9	273	Glucosamine-6-phosphate i	yes	N/A	0.940	0.289	0.683	1e-25
Q9CRC9	276	Glucosamine-6-phosphate i	yes	N/A	0.940	0.286	0.683	2e-25
Q29NT9	274	Glucosamine-6-phosphate i	yes	N/A	0.940	0.288	0.683	2e-25
A4IHW6	275	Glucosamine-6-phosphate i	no	N/A	0.940	0.287	0.696	2e-25
O88958	289	Glucosamine-6-phosphate i	no	N/A	0.940	0.273	0.670	5e-25

>sp|Q5TNH5|GNPI_ANOGA Glucosamine-6-phosphate isomerase OS=Anopheles gambiae GN=Gnpda1 PE=3 SV=3

 Score =  116 bits (291), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/77 (71%), Positives = 63/77 (81%)

Query: 8   KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
           K+P+   ++  ++     +VMI+I GSHKAFALYKAIEEGVNHMWTVSAFQ HP TIMIC
Sbjct: 180 KVPKQALTVGVATVMDAREVMIMILGSHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMIC 239

Query: 68  DEDATQELRVKTVKYFK 84
           DEDAT ELRVKTVKYFK
Sbjct: 240 DEDATLELRVKTVKYFK 256

Anopheles gambiae (taxid: 7165)
EC: 3EC: .EC: 5EC: .EC: 9EC: 9EC: .EC: 6

>sp|Q8TDQ7|GNPI2_HUMAN Glucosamine-6-phosphate isomerase 2 OS=Homo sapiens GN=GNPDA2 PE=1 SV=1

 Score =  115 bits (289), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/79 (69%), Positives = 62/79 (78%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct: 178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATLELRVKTVKYFK 256

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q17QL1|GNPI2_BOVIN Glucosamine-6-phosphate isomerase 2 OS=Bos taurus GN=GNPDA2 PE=2 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 55/79 (69%), Positives = 62/79 (78%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct: 178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATLELRVKTVKYFK 256

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q16HW7|GNPI_AEDAE Glucosamine-6-phosphate isomerase OS=Aedes aegypti GN=Gnpda1 PE=3 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 55/77 (71%), Positives = 62/77 (80%)

Query: 8   KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
           K+P+   ++   +     +VMILI G+HKAFALYKAIEEGVNHMWTVSAFQ HP TIMIC
Sbjct: 180 KVPKQALTVGVGTVMDAREVMILIIGAHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMIC 239

Query: 68  DEDATQELRVKTVKYFK 84
           DEDAT ELRVKTVKYFK
Sbjct: 240 DEDATLELRVKTVKYFK 256

Aedes aegypti (taxid: 7159)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q6PA43|GNPI2_XENLA Glucosamine-6-phosphate isomerase 2 OS=Xenopus laevis GN=gnpda2 PE=2 SV=1

 Score =  115 bits (288), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 55/79 (69%), Positives = 62/79 (78%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct: 178 LSKVPTMALTVGVGTVMDAKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATLELRVKTVKYFK 256

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q9VMP9|GNPI_DROME Glucosamine-6-phosphate isomerase OS=Drosophila melanogaster GN=Gnpda1 PE=2 SV=1

 Score =  114 bits (286), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/79 (68%), Positives = 63/79 (79%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           + K+P+   ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ H  T+M
Sbjct: 178 MSKVPKQALTVGVGTVMDSKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLM 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           ICDEDAT ELRVKTVKYFK
Sbjct: 238 ICDEDATLELRVKTVKYFK 256

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q9CRC9|GNPI2_MOUSE Glucosamine-6-phosphate isomerase 2 OS=Mus musculus GN=Gnpda2 PE=2 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/79 (68%), Positives = 62/79 (78%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P    ++   +     +VMILITG+HKAFALYKA+EEGVNHMWTVSAFQ HP TI 
Sbjct: 178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAMEEGVNHMWTVSAFQQHPRTIF 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATLELRVKTVKYFK 256

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q29NT9|GNPI_DROPS Glucosamine-6-phosphate isomerase OS=Drosophila pseudoobscura pseudoobscura GN=Gnpda1 PE=3 SV=1

 Score =  114 bits (284), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/79 (68%), Positives = 63/79 (79%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           + K+P+   ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ H  T+M
Sbjct: 178 MSKVPKQALTVGVGTVMDSKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLM 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           ICDEDAT ELRVKTVKYFK
Sbjct: 238 ICDEDATLELRVKTVKYFK 256

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|A4IHW6|GNPI2_XENTR Glucosamine-6-phosphate isomerase 2 OS=Xenopus tropicalis GN=gnpda2 PE=2 SV=1

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/79 (69%), Positives = 62/79 (78%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct: 178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATLELRVKTVKYFK 256

Xenopus tropicalis (taxid: 8364)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|O88958|GNPI1_MOUSE Glucosamine-6-phosphate isomerase 1 OS=Mus musculus GN=Gnpda1 PE=2 SV=3

 Score =  112 bits (281), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 53/79 (67%), Positives = 62/79 (78%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ 
Sbjct: 178 LAKVPTMALTVGVGTVMDAKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVF 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT EL+VKTVKYFK
Sbjct: 238 VCDEDATLELKVKTVKYFK 256

Seems to trigger calcium oscillations in mammalian eggs. These oscillations serve as the essential trigger for egg activation and early development of the embryo.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
91079050	274	PREDICTED: similar to GA19983-PA [Tribol	0.916	0.281	0.714	2e-25
427778009	318	Putative glucosamine-6-phosphate isomera	0.940	0.248	0.696	2e-25
427783289	283	Putative glucosamine-6-phosphate isomera	0.940	0.279	0.696	2e-25
346464855	278	hypothetical protein [Amblyomma maculatu	0.940	0.284	0.670	4e-25
346471597	294	hypothetical protein [Amblyomma maculatu	0.940	0.268	0.670	7e-25
62955707	269	glucosamine-6-phosphate isomerase 1 [Dan	0.940	0.293	0.708	8e-25
332030655	281	Glucosamine-6-phosphate isomerase [Acrom	0.916	0.274	0.701	8e-25
348583154	287	PREDICTED: glucosamine-6-phosphate isome	0.940	0.275	0.683	9e-25
351696458	287	Glucosamine-6-phosphate isomerase 1 [Het	0.940	0.275	0.683	1e-24
157137844	275	glucosamine-6-phosphate isomerase [Aedes	0.916	0.28	0.714	1e-24

>gi|91079050|ref|XP_975109.1| PREDICTED: similar to GA19983-PA [Tribolium castaneum] gi|270003660|gb|EFA00108.1| hypothetical protein TcasGA2_TC002924 [Tribolium castaneum]

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/77 (71%), Positives = 64/77 (83%)

Query: 8   KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
           K+PR   ++   +     +VMILITGSHKAFALYKAIE+GVNHMWTVSAFQ+HP T+M+C
Sbjct: 180 KVPREALTVGVGTVMDAREVMILITGSHKAFALYKAIEDGVNHMWTVSAFQLHPNTLMVC 239

Query: 68  DEDATQELRVKTVKYFK 84
           DEDAT ELRVKTVKYFK
Sbjct: 240 DEDATMELRVKTVKYFK 256

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427778009|gb|JAA54456.1| Putative glucosamine-6-phosphate isomerase [Rhipicephalus pulchellus]

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/79 (69%), Positives = 64/79 (81%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P+   ++   +     +VMILI G+HKAFALYKAIEEGVNHMWTVSAFQMHP TI+
Sbjct: 213 LTKVPKEALTVGVGTVMDAREVMILIVGAHKAFALYKAIEEGVNHMWTVSAFQMHPRTII 272

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT ELRVKTVKYFK
Sbjct: 273 VCDEDATNELRVKTVKYFK 291

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427783289|gb|JAA57096.1| Putative glucosamine-6-phosphate isomerase [Rhipicephalus pulchellus]

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/79 (69%), Positives = 64/79 (81%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P+   ++   +     +VMILI G+HKAFALYKAIEEGVNHMWTVSAFQMHP TI+
Sbjct: 178 LTKVPKEALTVGVGTVMDAREVMILIVGAHKAFALYKAIEEGVNHMWTVSAFQMHPRTII 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATNELRVKTVKYFK 256

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346464855|gb|AEO32272.1| hypothetical protein [Amblyomma maculatum]

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/79 (67%), Positives = 64/79 (81%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P+   ++   +     +VM+LI G+HKAFALYKA+EEGVNHMWTVSAFQMHP TI+
Sbjct: 178 LTKVPQEALTVGVGTVMDAREVMVLIVGAHKAFALYKAVEEGVNHMWTVSAFQMHPRTII 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT ELRVKTVKYFK
Sbjct: 238 VCDEDATNELRVKTVKYFK 256

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346471597|gb|AEO35643.1| hypothetical protein [Amblyomma maculatum]

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 53/79 (67%), Positives = 64/79 (81%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P+   ++   +     +VM+LI G+HKAFALYKA+EEGVNHMWTVSAFQMHP TI+
Sbjct: 189 LSKVPQEALTVGVGTVMDAREVMVLIVGAHKAFALYKAVEEGVNHMWTVSAFQMHPRTII 248

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT ELRVKTVKYFK
Sbjct: 249 VCDEDATNELRVKTVKYFK 267

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|62955707|ref|NP_001017867.1| glucosamine-6-phosphate isomerase 1 [Danio rerio] gi|62202396|gb|AAH92982.1| Glucosamine-6-phosphate deaminase 1 [Danio rerio]

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 56/79 (70%), Positives = 63/79 (79%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P    ++   +     +VMILITGSHKAFALYKAIEEGVNHMWTVSAFQ HP T+ 
Sbjct: 178 LSKVPTMALTVGVGTVMDAREVMILITGSHKAFALYKAIEEGVNHMWTVSAFQQHPQTVF 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDATQELRVKTVKYFK
Sbjct: 238 VCDEDATQELRVKTVKYFK 256

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332030655|gb|EGI70343.1| Glucosamine-6-phosphate isomerase [Acromyrmex echinatior]

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 54/77 (70%), Positives = 63/77 (81%)

Query: 8   KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
           K+P+   ++   +     +VMILITGSHKAFALYKAIEEG+NHMWTVSAFQ HP T++IC
Sbjct: 180 KVPKQALTVGVGTVMDAKEVMILITGSHKAFALYKAIEEGINHMWTVSAFQQHPRTLIIC 239

Query: 68  DEDATQELRVKTVKYFK 84
           DEDAT ELRVKTVKYFK
Sbjct: 240 DEDATLELRVKTVKYFK 256

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348583154|ref|XP_003477338.1| PREDICTED: glucosamine-6-phosphate isomerase 1-like [Cavia porcellus]

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/79 (68%), Positives = 63/79 (79%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HPCT+ 
Sbjct: 178 LAKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPCTVF 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT EL+VKTVKYFK
Sbjct: 238 VCDEDATLELKVKTVKYFK 256

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|351696458|gb|EHA99376.1| Glucosamine-6-phosphate isomerase 1 [Heterocephalus glaber]

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/79 (68%), Positives = 63/79 (79%)

Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HPCT+ 
Sbjct: 178 LAKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPCTVF 237

Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT EL+VKTVKYFK
Sbjct: 238 VCDEDATLELKVKTVKYFK 256

Source: Heterocephalus glaber

Species: Heterocephalus glaber

Genus: Heterocephalus

Family: Bathyergidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|157137844|ref|XP_001657191.1| glucosamine-6-phosphate isomerase [Aedes aegypti] gi|157137852|ref|XP_001657195.1| glucosamine-6-phosphate isomerase [Aedes aegypti] gi|157137854|ref|XP_001657196.1| glucosamine-6-phosphate isomerase [Aedes aegypti] gi|108869621|gb|EAT33846.1| AAEL013877-PD [Aedes aegypti] gi|108869625|gb|EAT33850.1| AAEL013877-PC [Aedes aegypti] gi|108869626|gb|EAT33851.1| AAEL013877-PB [Aedes aegypti]

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/77 (71%), Positives = 62/77 (80%)

Query: 8   KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
           K+P+   ++   +     +VMILI G+HKAFALYKAIEEGVNHMWTVSAFQ HP TIMIC
Sbjct: 180 KVPKQALTVGVGTVMDAREVMILIIGAHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMIC 239

Query: 68  DEDATQELRVKTVKYFK 84
           DEDAT ELRVKTVKYFK
Sbjct: 240 DEDATLELRVKTVKYFK 256

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
ZFIN|ZDB-GENE-050417-417	275	gnpda1 "glucosamine-6-phosphat	0.940	0.287	0.708	2.9e-25
UNIPROTKB|Q5TNH5	273	Gnpda1 "Glucosamine-6-phosphat	0.916	0.282	0.714	1.2e-24
UNIPROTKB|Q16HW7	278	Gnpda1 "Glucosamine-6-phosphat	0.916	0.276	0.714	2e-24
ZFIN|ZDB-GENE-091117-41	277	gnpda2 "glucosamine-6-phosphat	0.940	0.285	0.708	2e-24
UNIPROTKB|E1C878	275	GNPDA2 "Glucosamine-6-phosphat	0.940	0.287	0.696	2.6e-24
UNIPROTKB|Q17QL1	276	GNPDA2 "Glucosamine-6-phosphat	0.940	0.286	0.696	2.6e-24
UNIPROTKB|E2RH59	276	GNPDA2 "Uncharacterized protei	0.940	0.286	0.696	2.6e-24
UNIPROTKB|B4DJF3	206	GNPDA2 "cDNA FLJ60594, highly	0.940	0.383	0.696	2.6e-24
UNIPROTKB|Q2VYF1	242	GNPDA2 "Glucosamine-6-phosphat	0.940	0.326	0.696	2.6e-24
UNIPROTKB|Q8TDQ7	276	GNPDA2 "Glucosamine-6-phosphat	0.940	0.286	0.696	2.6e-24

ZFIN|ZDB-GENE-050417-417 gnpda1 "glucosamine-6-phosphate deaminase 1" [Danio rerio (taxid:7955)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 56/79 (70%), Positives = 63/79 (79%)

Query:     6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
             L K+P    ++   +     +VMILITGSHKAFALYKAIEEGVNHMWTVSAFQ HP T+ 
Sbjct:   178 LSKVPTMALTVGVGTVMDAREVMILITGSHKAFALYKAIEEGVNHMWTVSAFQQHPQTVF 237

Query:    66 ICDEDATQELRVKTVKYFK 84
             +CDEDATQELRVKTVKYFK
Sbjct:   238 VCDEDATQELRVKTVKYFK 256

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q5TNH5 Gnpda1 "Glucosamine-6-phosphate isomerase" [Anopheles gambiae (taxid:7165)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 55/77 (71%), Positives = 63/77 (81%)

Query:     8 KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
             K+P+   ++  ++     +VMI+I GSHKAFALYKAIEEGVNHMWTVSAFQ HP TIMIC
Sbjct:   180 KVPKQALTVGVATVMDAREVMIMILGSHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMIC 239

Query:    68 DEDATQELRVKTVKYFK 84
             DEDAT ELRVKTVKYFK
Sbjct:   240 DEDATLELRVKTVKYFK 256

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006043 "glucosamine catabolic process" evidence=ISS

GO:0006091 "generation of precursor metabolites and energy" evidence=ISS

UNIPROTKB|Q16HW7 Gnpda1 "Glucosamine-6-phosphate isomerase" [Aedes aegypti (taxid:7159)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 55/77 (71%), Positives = 62/77 (80%)

Query:     8 KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
             K+P+   ++   +     +VMILI G+HKAFALYKAIEEGVNHMWTVSAFQ HP TIMIC
Sbjct:   180 KVPKQALTVGVGTVMDAREVMILIIGAHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMIC 239

Query:    68 DEDATQELRVKTVKYFK 84
             DEDAT ELRVKTVKYFK
Sbjct:   240 DEDATLELRVKTVKYFK 256

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006043 "glucosamine catabolic process" evidence=ISS

GO:0006091 "generation of precursor metabolites and energy" evidence=ISS

ZFIN|ZDB-GENE-091117-41 gnpda2 "glucosamine-6-phosphate deaminase 2" [Danio rerio (taxid:7955)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 56/79 (70%), Positives = 62/79 (78%)

Query:     6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
             L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct:   178 LSKVPTMTLTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237

Query:    66 ICDEDATQELRVKTVKYFK 84
             ICDEDAT ELRVKTVKYFK
Sbjct:   238 ICDEDATLELRVKTVKYFK 256

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

UNIPROTKB|E1C878 GNPDA2 "Glucosamine-6-phosphate deaminase 2 isoform 1" [Gallus gallus (taxid:9031)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 55/79 (69%), Positives = 62/79 (78%)

Query:     6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
             L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct:   178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237

Query:    66 ICDEDATQELRVKTVKYFK 84
             +CDEDAT ELRVKTVKYFK
Sbjct:   238 VCDEDATLELRVKTVKYFK 256

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

UNIPROTKB|Q17QL1 GNPDA2 "Glucosamine-6-phosphate isomerase 2" [Bos taurus (taxid:9913)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 55/79 (69%), Positives = 62/79 (78%)

Query:     6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
             L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct:   178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237

Query:    66 ICDEDATQELRVKTVKYFK 84
             +CDEDAT ELRVKTVKYFK
Sbjct:   238 VCDEDATLELRVKTVKYFK 256

GO:0005737 "cytoplasm" evidence=IEA

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

UNIPROTKB|E2RH59 GNPDA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 55/79 (69%), Positives = 62/79 (78%)

Query:     6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
             L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct:   178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237

Query:    66 ICDEDATQELRVKTVKYFK 84
             +CDEDAT ELRVKTVKYFK
Sbjct:   238 VCDEDATLELRVKTVKYFK 256

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

UNIPROTKB|B4DJF3 GNPDA2 "cDNA FLJ60594, highly similar to Homo sapiens glucosamine-6-phosphate deaminase 2 (GNPDA2), mRNA" [Homo sapiens (taxid:9606)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 55/79 (69%), Positives = 62/79 (78%)

Query:     6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
             L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct:   108 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 167

Query:    66 ICDEDATQELRVKTVKYFK 84
             +CDEDAT ELRVKTVKYFK
Sbjct:   168 VCDEDATLELRVKTVKYFK 186

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

UNIPROTKB|Q2VYF1 GNPDA2 "Glucosamine-6-phosphate isomerase 2" [Homo sapiens (taxid:9606)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 55/79 (69%), Positives = 62/79 (78%)

Query:     6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
             L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct:   144 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 203

Query:    66 ICDEDATQELRVKTVKYFK 84
             +CDEDAT ELRVKTVKYFK
Sbjct:   204 VCDEDATLELRVKTVKYFK 222

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

UNIPROTKB|Q8TDQ7 GNPDA2 "Glucosamine-6-phosphate isomerase 2" [Homo sapiens (taxid:9606)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 55/79 (69%), Positives = 62/79 (78%)

Query:     6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
             L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI 
Sbjct:   178 LSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIF 237

Query:    66 ICDEDATQELRVKTVKYFK 84
             +CDEDAT ELRVKTVKYFK
Sbjct:   238 VCDEDATLELRVKTVKYFK 256

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q32IQ2	NAGB_SHIDS	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
B2TU53	NAGB_SHIB3	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
C6DBY4	NAGB_PECCP	3, ., 5, ., 9, 9, ., 6	0.6101	0.7023	0.2218	yes	N/A
Q0TK13	NAGB_ECOL5	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
A5F125	NAGB_VIBC3	3, ., 5, ., 9, 9, ., 6	0.6206	0.6904	0.2180	yes	N/A
A3N353	NAGB_ACTP2	3, ., 5, ., 9, 9, ., 6	0.5128	0.9285	0.2921	yes	N/A
Q29NT9	GNPI_DROPS	3, ., 5, ., 9, 9, ., 6	0.6835	0.9404	0.2883	yes	N/A
C3LWT7	NAGB_VIBCM	3, ., 5, ., 9, 9, ., 6	0.6206	0.6904	0.2180	yes	N/A
Q87K60	NAGB_VIBPA	3, ., 5, ., 9, 9, ., 6	0.6206	0.6904	0.2180	yes	N/A
Q9CMF4	NAGB_PASMU	3, ., 5, ., 9, 9, ., 6	0.5131	0.9047	0.2846	yes	N/A
B0BSS6	NAGB_ACTPJ	3, ., 5, ., 9, 9, ., 6	0.5128	0.9285	0.2921	yes	N/A
A7N5W3	NAGB_VIBHB	3, ., 5, ., 9, 9, ., 6	0.6206	0.6904	0.2180	yes	N/A
Q8D4T9	NAGB_VIBVU	3, ., 5, ., 9, 9, ., 6	0.6206	0.6904	0.2180	yes	N/A
Q324M6	NAGB_SHIBS	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
Q3Z4C2	NAGB_SHISS	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
B7N9S4	NAGB_ECOLU	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
B1LLC0	NAGB_ECOSM	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
B6HYN6	NAGB_ECOSE	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
Q1REP9	NAGB_ECOUT	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
B7LKT5	NAGB_ESCF3	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
B1IY50	NAGB_ECOLC	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
A1A8T7	NAGB_ECOK1	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
Q9KKS5	NAGB_VIBCH	3, ., 5, ., 9, 9, ., 6	0.6206	0.6904	0.2180	yes	N/A
Q54XK9	GNPI_DICDI	3, ., 5, ., 9, 9, ., 6	0.6440	0.7023	0.2209	yes	N/A
B3GZ06	NAGB_ACTP7	3, ., 5, ., 9, 9, ., 6	0.5128	0.9285	0.2921	yes	N/A
Q9XVJ2	GNPI_CAEEL	3, ., 5, ., 9, 9, ., 6	0.5696	0.9404	0.2958	yes	N/A
Q5E294	NAGB_VIBF1	3, ., 5, ., 9, 9, ., 6	0.6101	0.7023	0.2218	yes	N/A
Q5TNH5	GNPI_ANOGA	3, ., 5, ., 9, 9, ., 6	0.7142	0.9166	0.2820	yes	N/A
Q7MB61	NAGB_PHOLL	3, ., 5, ., 9, 9, ., 6	0.6379	0.6904	0.2148	yes	N/A
Q17QL1	GNPI2_BOVIN	3, ., 5, ., 9, 9, ., 6	0.6962	0.9404	0.2862	yes	N/A
Q7MGE1	NAGB_VIBVY	3, ., 5, ., 9, 9, ., 6	0.6206	0.6904	0.2180	yes	N/A
A7ZXT7	NAGB_ECOHS	3, ., 5, ., 9, 9, ., 6	0.6034	0.6904	0.2180	yes	N/A
Q8TDQ7	GNPI2_HUMAN	3, ., 5, ., 9, 9, ., 6	0.6962	0.9404	0.2862	yes	N/A
Q9VMP9	GNPI_DROME	3, ., 5, ., 9, 9, ., 6	0.6835	0.9404	0.2893	yes	N/A
B5FBU7	NAGB_VIBFM	3, ., 5, ., 9, 9, ., 6	0.6101	0.7023	0.2218	yes	N/A
Q9CRC9	GNPI2_MOUSE	3, ., 5, ., 9, 9, ., 6	0.6835	0.9404	0.2862	yes	N/A
C5BGA6	NAGB_EDWI9	3, ., 5, ., 9, 9, ., 6	0.5762	0.7023	0.2218	yes	N/A
B7VTI0	NAGB_VIBSL	3, ., 5, ., 9, 9, ., 6	0.6206	0.6904	0.2180	yes	N/A
C6C0A2	NAGB_DESAD	3, ., 5, ., 9, 9, ., 6	0.6101	0.7023	0.2226	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	84
PRK00443	261	PRK00443, nagB, glucosamine-6-phosphate deaminase;	7e-24
TIGR00502	259	TIGR00502, nagB, glucosamine-6-phosphate isomerase	2e-22
PTZ00285	253	PTZ00285, PTZ00285, glucosamine-6-phosphate isomer	3e-22
cd01399	232	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Gluco	4e-18
COG0363	238	COG0363, NagB, 6-phosphogluconolactonase/Glucosami	6e-12
cd00458	169	cd00458, SugarP_isomerase, SugarP_isomerase: Sugar	4e-08
PRK12358	239	PRK12358, PRK12358, putative 6-phosphogluconolacto	0.001
PRK02122	652	PRK02122, PRK02122, glucosamine-6-phosphate deamin	0.001

>gnl|CDD|179028 PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional

 Score = 89.9 bits (224), Expect = 7e-24
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
           ++M+L  G +KA A+  A+E  VNHMW  S  Q+HP   ++ DE A  EL+VKTVKYF 
Sbjct: 198 EIMLLAPGHNKAEAVKAAVEGPVNHMWPASILQLHPKATLVLDEAAASELKVKTVKYFT 256

Length = 261

>gnl|CDD|129593 TIGR00502, nagB, glucosamine-6-phosphate isomerase

 Score = 86.4 bits (214), Expect = 2e-22
 Identities = 37/58 (63%), Positives = 49/58 (84%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
           +V+IL++G  KA AL KA+E GVNHMWT+SA Q+H   I++CDE+ATQEL+VKTV+YF
Sbjct: 198 EVLILVSGHQKALALQKAVEGGVNHMWTISALQLHKHAIVVCDENATQELKVKTVEYF 255

The set of proteins recognized by This model includes a closely related pair from Bacillus subtilis, one of which is uncharacterized but included as a member of the orthologous set [Central intermediary metabolism, Amino sugars]. Length = 259

>gnl|CDD|140308 PTZ00285, PTZ00285, glucosamine-6-phosphate isomerase; Provisional

 Score = 86.0 bits (213), Expect = 3e-22
 Identities = 29/56 (51%), Positives = 39/56 (69%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVK 81
           +V++L TG+ KA A+ + +E GV HM   SA QMHP  ++  DEDAT EL+VKT K
Sbjct: 198 EVLLLATGASKAIAVARCVEGGVTHMCPASALQMHPAAVLCLDEDATLELKVKTTK 253

Length = 253

>gnl|CDD|238693 cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium

 Score = 74.4 bits (184), Expect = 4e-18
 Identities = 20/50 (40%), Positives = 28/50 (56%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75
           ++++L TG  KA A+ KA+E  V      S  Q+HP   +I DE A  EL
Sbjct: 183 EILLLATGEGKAEAVKKALEGPVTEECPASILQLHPNVTVILDEAAASEL 232

The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P. Length = 232

>gnl|CDD|223440 COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]

 Score = 58.0 bits (141), Expect = 6e-12
 Identities = 20/52 (38%), Positives = 31/52 (59%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV 77
           +V++L+TG  KA AL +A+E  V  ++  S  Q+HP      DE+A   L+V
Sbjct: 187 EVLLLVTGEEKADALKQALEGPVTELYPASILQLHPNVTWFLDEEAASLLKV 238

Length = 238

>gnl|CDD|238258 cd00458, SugarP_isomerase, SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL)

 Score = 47.3 bits (112), Expect = 4e-08
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 27  VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
           V++L+ G  K   L +  E GV      +  +     I+I 
Sbjct: 129 VIVLVDGRKKVDYLCQNTEPGVIENGIFADIRGKEKDIVIV 169

RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium, the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate. 6PGL converts 6-phosphoglucono-1,5-lactone to 6-phosphogluconate, the second step of the oxidative phase of the pentose phosphate pathway. Length = 169

>gnl|CDD|183470 PRK12358, PRK12358, putative 6-phosphogluconolactonase; Provisional

 Score = 35.5 bits (82), Expect = 0.001
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 23  HFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75
               +++++ G  KA  L K ++  V      S  Q+HP   +I DE A  EL
Sbjct: 185 AAKNLLLIVNGKGKAQILKKVLQGPVTEDVPASILQLHPNLTVILDEAAAAEL 237

Length = 239

>gnl|CDD|235005 PRK02122, PRK02122, glucosamine-6-phosphate deaminase-like protein; Validated

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL-RVKT 79
           ++++L  G HKA  + +A+E  ++     S  Q HP    + D  A  EL R+KT
Sbjct: 225 RIVLLAWGEHKAPIIKRAVEGEISDEVPASYLQEHPNATFVLDLAAASELTRIKT 279

Length = 652

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	84
PTZ00285	253	glucosamine-6-phosphate isomerase; Provisional	99.86
PRK12358	239	putative 6-phosphogluconolactonase; Provisional	99.86
TIGR01198	233	pgl 6-phosphogluconolactonase. This enzyme of the	99.84
COG0363	238	NagB 6-phosphogluconolactonase/Glucosamine-6-phosp	99.84
TIGR00502	259	nagB glucosamine-6-phosphate isomerase. The set of	99.84
PLN02360	268	probable 6-phosphogluconolactonase	99.82
PRK00443	261	nagB glucosamine-6-phosphate deaminase; Provisiona	99.79
PRK09762	232	galactosamine-6-phosphate isomerase; Provisional	99.78
PRK02122	652	glucosamine-6-phosphate deaminase-like protein; Va	99.78
KOG3147|consensus	252		99.73
cd01399	232	GlcN6P_deaminase GlcN6P_deaminase: Glucosamine-6-p	99.7
KOG3148|consensus	273		99.69
cd01400	219	6PGL 6PGL: 6-Phosphogluconolactonase (6PGL) subfam	99.64
cd00458	169	SugarP_isomerase SugarP_isomerase: Sugar Phosphate	99.22
PF01182	199	Glucosamine_iso: Glucosamine-6-phosphate isomerase	99.2
PF04198	255	Sugar-bind: Putative sugar-binding domain; InterPr	96.03
PRK15418	318	transcriptional regulator LsrR; Provisional	95.83
COG2390	321	DeoR Transcriptional regulator, contains sigma fac	95.72

>PTZ00285 glucosamine-6-phosphate isomerase; Provisional

Probab=99.86  E-value=5.7e-22  Score=140.47  Aligned_cols=75  Identities=40%  Similarity=0.597  Sum_probs=70.6

Q ss_pred             CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhh
Q psy906            6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTV   80 (84)
Q Consensus         6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~   80 (84)
                      .+++|++|||||++.|++|++|+|+++|++|+++|+++++++.+.++|+|+|+.|++++||+|++||+.|..+|.
T Consensus       178 ~~~~p~~riTlt~~~i~~a~~i~l~~~G~~K~~~l~~~l~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l~~~~~  252 (253)
T PTZ00285        178 ISKVPTMALTVGIRTIMEAREVLLLATGASKAIAVARCVEGGVTHMCPASALQMHPAAVLCLDEDATLELKVKTT  252 (253)
T ss_pred             cCCCCCccEEcCHHHHHhCCEEEEEecCHHHHHHHHHHhcCCCCCccchHHhccCCCEEEEEcHHHHhhhhhccc
Confidence            478899999999999999999999999999999999999988777899999999999999999999999988764

>PRK12358 putative 6-phosphogluconolactonase; Provisional

Probab=99.86  E-value=8.1e-22  Score=138.82  Aligned_cols=71  Identities=25%  Similarity=0.338  Sum_probs=67.6

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      +.+++|++|||||++.|++||+|+|+++|++|+++|+++++++++.++|+|+++.|++++||+|++|++.|
T Consensus       167 ~~~~~P~~riTlt~~~i~~A~~i~ll~~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~aa~~l  237 (239)
T PRK12358        167 DFSLVPDSYVTMGPKSIMAAKNLLLIVNGKGKAQILKKVLQGPVTEDVPASILQLHPNLTVILDEAAAAEL  237 (239)
T ss_pred             CcccCCCeeEEcchHHHHhCCEEEEEEeCHHHHHHHHHHHcCCCCCCcCcHHhccCCCEEEEECHHHHhhc
Confidence            46889999999999999999999999999999999999999988889999999999999999999999876

>TIGR01198 pgl 6-phosphogluconolactonase

Probab=99.84  E-value=3.5e-21  Score=135.26  Aligned_cols=71  Identities=23%  Similarity=0.197  Sum_probs=65.4

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHh-cCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIE-EGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~-~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      +.+++|++|||||++.|++|++|+|+++|++|+++|+++++ ++.+.++|+++++.|++++||+|++||+.|
T Consensus       162 ~~~~~p~~RITlt~~~i~~a~~i~~lv~G~~Ka~~~~~~l~~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l  233 (233)
T TIGR01198       162 KSPKPPHERITLTLPAINAARKVFLLIAGEEKRNALAEALAVEAEPYPLPAAGVLHSGKTLWLLDYAAARKL  233 (233)
T ss_pred             CCCCCCCCcEEecHHHHhcCCeEEEEEEChHHHHHHHHHHhcCCCcccCCHhHcCCCCcEEEEEChHhhhcC
Confidence            35788999999999999999999999999999999999998 566668999999999999999999999764

This enzyme of the pentose phosphate pathway is often found as a part of a multifunctional protein with

>COG0363 NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]

Probab=99.84  E-value=3.2e-21  Score=136.56  Aligned_cols=73  Identities=30%  Similarity=0.448  Sum_probs=69.1

Q ss_pred             CCCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906            4 AGLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   76 (84)
Q Consensus         4 ~~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~   76 (84)
                      ++.+++|++|||||++.|++|++|+|+|+|++|+++++++++|+.+..||+|.|+.|++++||+|++|++.|.
T Consensus       165 ~~~~~~P~~riTlt~~~I~~Ak~v~llv~G~~Ka~al~~~l~~~~~~~~Pas~l~~~~~~~~~~d~~A~~~l~  237 (238)
T COG0363         165 GDSPKVPKERITLTLPTILDAKEVLLLVTGEEKADALKQALEGPVTELYPASILQLHPNVTWFLDEEAASLLK  237 (238)
T ss_pred             CCCCCCCcceEEeCHHHHhcCCeEEEEEcCchHHHHHHHHhcCCCcccccHHHHhcCCCeEEEEchHHhhhcc
Confidence            3568999999999999999999999999999999999999999998889999999999999999999999774

>TIGR00502 nagB glucosamine-6-phosphate isomerase

Probab=99.84  E-value=5.3e-21  Score=135.78  Aligned_cols=79  Identities=48%  Similarity=0.818  Sum_probs=73.7

Q ss_pred             CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhcccC
Q psy906            6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK   84 (84)
Q Consensus         6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~~   84 (84)
                      .+.+|++|||||++.|++|++|+|+++|++|+++|+++++|+.+..+|+++++.|++++||+|++||+.+..++.+|++
T Consensus       178 ~~~~p~~riTlt~~~i~~a~~vi~~~~G~~Ka~al~~al~~~~~~~~Pas~l~~~~~~~~~~d~~Aa~~l~~~~~~~~~  256 (259)
T TIGR00502       178 VNQVPKYALTVGIGTILDSKEVLILVSGHQKALALQKAVEGGVNHMWTISALQLHKHAIVVCDENATQELKVKTVEYFN  256 (259)
T ss_pred             CCCCCCceEecCHHHHhhCCEEEEEEcCHHHHHHHHHHHcCCCCCccchHHhccCCCEEEEEcHHHHhhhhHHHHHHhh
Confidence            3567899999999999999999999999999999999999988889999999999999999999999999888888763

The set of proteins recognized by this model includes a closely related pair from Bacillus subtilis, one of which is uncharacterized but included as a member of the orthologous set.

>PLN02360 probable 6-phosphogluconolactonase

Probab=99.82  E-value=2.6e-20  Score=133.19  Aligned_cols=72  Identities=21%  Similarity=0.109  Sum_probs=65.5

Q ss_pred             CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHh----cCCcccccccceecCC-cEEEEEeHHHHhhhhh
Q psy906            6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIE----EGVNHMWTVSAFQMHP-CTIMICDEDATQELRV   77 (84)
Q Consensus         6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~----~~~~~~~Pas~l~~h~-~~~~~~D~~Aa~~l~~   77 (84)
                      .+++|++|||||++.|++|++|+|+++|++|+++|++++.    ++.+.++|+++|+.|+ +++||+|++|++.|..
T Consensus       187 ~~~~p~~RITlt~~~i~~A~~i~llv~G~~Ka~al~~~l~~~~~~~~~~~~Pas~l~~~~~~~~w~~D~~Aa~~l~~  263 (268)
T PLN02360        187 SPKPPPERITFTLPVINSASNVAVVATGESKANAVHLAIDDVTEGPDAPSLPARMVQPTKGKLVWFLDKPAASKLDG  263 (268)
T ss_pred             CCCCCCceEEEcHHHHhcCCeEEEEEeCccHHHHHHHHHhhccCCCCcccCChhhhcCCCCcEEEEECHHHHhhCcc
Confidence            4778999999999999999999999999999999999995    5555689999999885 8999999999998864

>PRK00443 nagB glucosamine-6-phosphate deaminase; Provisional

Probab=99.79  E-value=1.6e-19  Score=127.14  Aligned_cols=78  Identities=38%  Similarity=0.617  Sum_probs=74.1

Q ss_pred             CCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhcccC
Q psy906            7 VKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK   84 (84)
Q Consensus         7 ~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~~   84 (84)
                      +.+|++|||||++.|++|++++++++|++|++++++++.|+.+.++|+++++.|++++||+|++||+.|..+++.||.
T Consensus       179 ~~~~~~~itl~l~~L~~a~~vi~~a~G~~K~~ai~~al~~~~~~~~Pa~~l~~~~~~~~~~d~~aa~~l~~~~~~~~~  256 (261)
T PRK00443        179 EQVPKYALTVGVGTILDAKEIMLLAPGHNKAEAVKAAVEGPVNHMWPASILQLHPKATLVLDEAAASELKVKTVKYFT  256 (261)
T ss_pred             cCCCCeeEEcCHHHHHhcCeEEEEecChHHHHHHHHHHhCCCCCCcchHHHhhCCCEEEEEcHHHHhHHHHHHHHHhh
Confidence            578899999999999999999999999999999999999988889999999999999999999999999999999873

>PRK09762 galactosamine-6-phosphate isomerase; Provisional

Probab=99.78  E-value=2.9e-19  Score=125.54  Aligned_cols=64  Identities=19%  Similarity=0.136  Sum_probs=60.9

Q ss_pred             CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeH
Q psy906            6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDE   69 (84)
Q Consensus         6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~   69 (84)
                      .+++|++|||||++.|++||+|+|+++|++|+++|+++++|+.+.++|+|+||.|+++++++|+
T Consensus       169 ~~~~p~~riTlt~~~i~~A~~i~llv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~d~  232 (232)
T PRK09762        169 AGRPVTRGITLGLKDILNAREVLLLVTGEGKQDATERFLTAKVSTAIPASFLWLHSNFICLIDR  232 (232)
T ss_pred             CCCCCCccEEeCHHHHHhcCEEEEEEeCHHHHHHHHHHHcCCCCCcccHHHHhhCCCEEEEecC
Confidence            4778999999999999999999999999999999999999988889999999999999999995

>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated

Probab=99.78  E-value=3.9e-19  Score=139.96  Aligned_cols=73  Identities=25%  Similarity=0.333  Sum_probs=69.3

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhh
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV   77 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~   77 (84)
                      +.+.+|++|||||++.|++|++|+|+++|++|+++|+++++|+.+..+|+|+|+.|++++||+|++||+.|++
T Consensus       204 ~~~~~P~~rITmgi~~I~~Ar~Iilla~G~~Ka~iv~~~l~g~~~~~~PAs~Lq~h~~~~~~lD~~AA~~Ltr  276 (652)
T PRK02122        204 GEENVPRKAITMGVGTILKARRIVLLAWGEHKAPIIKRAVEGEISDEVPASYLQEHPNATFVLDLAAASELTR  276 (652)
T ss_pred             CCCCCCCceEEeCHHHHHhhCeEEEEEeCHHHHHHHHHHHhCCCCCccchHHhccCCCEEEEEcHHHhhhccc
Confidence            4588999999999999999999999999999999999999998888999999999999999999999998865

>KOG3147|consensus

Probab=99.73  E-value=5.5e-18  Score=120.41  Aligned_cols=73  Identities=19%  Similarity=0.197  Sum_probs=66.1

Q ss_pred             CCCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceec-CCcEEEEEeHHHHhhhhh
Q psy906            4 AGLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQM-HPCTIMICDEDATQELRV   77 (84)
Q Consensus         4 ~~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~-h~~~~~~~D~~Aa~~l~~   77 (84)
                      .+.|++|+.|||+|+|.|+.|+++.|+|+|+.|+++++.+++... ..+|++++.. .++++||+|++|+++++.
T Consensus       177 tdSPkpPp~RITlTLPvIn~A~~v~fvv~G~~Ka~iv~~i~~~~~-~~lPaa~V~~~~~~l~WflD~~A~~~l~~  250 (252)
T KOG3147|consen  177 TDSPKPPPKRITLTLPVINHAKNVAFVVCGASKAEIVKAILEDKE-KKLPAALVNPAKGKLVWFLDDDAASKLPV  250 (252)
T ss_pred             CCCCCCCCccEEEehHHhhhhhceEEEEeCcchhHhHHHHHhccc-ccCCchheeccCCeEEEEEchHHhcCCCC
Confidence            367999999999999999999999999999999999999998754 4799999995 567999999999998864

>cd01399 GlcN6P_deaminase GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium

Probab=99.70  E-value=3e-17  Score=113.35  Aligned_cols=69  Identities=30%  Similarity=0.392  Sum_probs=65.2

Q ss_pred             CCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906            7 VKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus         7 ~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      +.+|++|||||++.|+++++++++++|++|+++++.++.|+.+.++|+++++.|++++||+|++||+.|
T Consensus       164 ~~~~~~~itltl~~l~~a~~vi~~a~G~~K~~ai~~al~~~~~~~~P~~~l~~~~~~~~~~d~~aa~~~  232 (232)
T cd01399         164 EDVPTQAITMGIGTIMKAKEILLLATGEGKAEAVKKALEGPVTEECPASILQLHPNVTVILDEAAASEL  232 (232)
T ss_pred             CCCCCceEecCHHHHhhCCEEEEEeCChHHHHHHHHHHhCCCCCCcchHHHhhCCCeEEEEcHHHhccC
Confidence            578899999999999999999999999999999999999988889999999999999999999999754

The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P.

>KOG3148|consensus

Probab=99.69  E-value=9.1e-18  Score=116.95  Aligned_cols=81  Identities=67%  Similarity=0.988  Sum_probs=78.4

Q ss_pred             CCCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhccc
Q psy906            4 AGLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF   83 (84)
Q Consensus         4 ~~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~   83 (84)
                      +++.++|++++|.|..+.|.||+|+++++|+.|+-+|.++++..++..|.+|..|.|+++++++|++|.-+|..||++||
T Consensus       176 gd~tkvpt~altvgvgtvmdarevmilitgahkafalykaieegvnhmwtvsafqqh~~t~ficdedatlelkvktvkyf  255 (273)
T KOG3148|consen  176 GDLTKVPTQALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTTFICDEDATLELKVKTVKYF  255 (273)
T ss_pred             CccccCccceeEeeeeeeeecceEEEEEeccHHHHHHHHHHHhcccceeehhhHhhCCceEEEecCCceeEEEeeehHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             C
Q psy906           84 K   84 (84)
Q Consensus        84 ~   84 (84)
                      +
T Consensus       256 k  256 (273)
T KOG3148|consen  256 K  256 (273)
T ss_pred             H
Confidence            5

>cd01400 6PGL 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate

Probab=99.64  E-value=2.8e-16  Score=109.38  Aligned_cols=61  Identities=20%  Similarity=0.139  Sum_probs=56.0

Q ss_pred             CCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecC-CcEEEEE
Q psy906            7 VKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMH-PCTIMIC   67 (84)
Q Consensus         7 ~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h-~~~~~~~   67 (84)
                      +++|++|||||++.|++|++|+|+++|++|+++|+++++|+.+.++|+++++.| .++.||+
T Consensus       158 ~~~p~~RiTlt~~~i~~a~~i~ll~~G~~K~~~l~~~l~~~~~~~~Pas~l~~~~~~~~w~~  219 (219)
T cd01400         158 PKPPPERITLTLPVLNNARRVVFLVTGAEKAEALKRALAGPDPEELPAARVLPRPGEVLWFL  219 (219)
T ss_pred             CCCCCccEEecHHHHhcCCeEEEEEeChhHHHHHHHHHcCCCCCCCChhhhcCCCCcEEEeC
Confidence            568999999999999999999999999999999999999987778999999988 5577873

6PGL is thought to guard against the accumulation of the delta form of the lactone, which may be toxic through its reaction with endogenous cellular nucleophiles.

>cd00458 SugarP_isomerase SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL)

Probab=99.22  E-value=1.4e-11  Score=82.86  Aligned_cols=53  Identities=19%  Similarity=0.124  Sum_probs=47.4

Q ss_pred             eEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEE
Q psy906           13 EKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC   67 (84)
Q Consensus        13 riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~   67 (84)
                      -+=||+.  ++|++++|+|+|++|+++|+++++|+.+.++|++.++.|++++||+
T Consensus       117 l~lLG~G--~~a~~i~~~~~G~~Ka~~l~~~~~~~~~~~~Pas~l~~~~~~~~~~  169 (169)
T cd00458         117 LAVDGAG--YRAGTVIVLVDGRKKVDYLCQNTEPGVIENGIFADIRGKEKDIVIV  169 (169)
T ss_pred             EEEECcC--ccccEEEEEecChhHHHHHHHHhcCCCCCcCCHHHhccCCCeEEeC
Confidence            3445666  8999999999999999999999998877799999999999999985

RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium, the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate. 6PGL converts 6-phosphoglucono-1,5-lactone to 6-phosphogluconate, the second step of the oxidative phase of the pentose phosphate pathway.

>PF01182 Glucosamine_iso: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; InterPro: IPR006148 This domain is characteristic of the enzymes 6-phosphogluconolactonase (3

Probab=99.20  E-value=2.5e-11  Score=83.43  Aligned_cols=40  Identities=25%  Similarity=0.281  Sum_probs=36.6

Q ss_pred             CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHh
Q psy906            6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIE   45 (84)
Q Consensus         6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~   45 (84)
                      .+++|++|||||++.|++|++|+|+++|++|+++|+++++
T Consensus       160 ~~~~p~~riTlt~~~i~~a~~i~~l~~G~~Ka~~v~~~l~  199 (199)
T PF01182_consen  160 SPKPPPQRITLTLPTIMSARKIVLLATGEEKAEAVKRALQ  199 (199)
T ss_dssp             CTTSSSEEEEE-HHHHHTSSEEEEEEESGGGHHHHHHHH-
T ss_pred             CCCCCcceEEeCHHHHHhcCEEEEEEeCHHHHHHHHHHhC
Confidence            4889999999999999999999999999999999999885

1.1.31 from EC), Glucosamine-6-phosphate isomerase (3.5.99.6 from EC), and Galactosamine-6-phosphate isomerase. 6-Phosphogluconolactonase is the enzyme responsible for the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate, the second step in the pentose phosphate pathway. Glucosamine-6-phosphate isomerase (or Glucosamine 6-phosphate deaminase) is the enzyme responsible for the conversion of D-glucosamine 6-phosphate into D-fructose 6-phosphate []. It is the last specific step in the pathway for N-acetylglucosamine (GlcNAC) utilization in bacteria such as Escherichia coli (gene nagB) or in fungi such as Candida albicans (gene NAG1).; GO: 0005975 carbohydrate metabolic process; PDB: 3CSS_A 3CH7_A 1Y89_B 3TX2_A 2BKX_B 2BKV_B 3E15_B 1HOR_B 1JT9_A 1HOT_A ....

>PF04198 Sugar-bind: Putative sugar-binding domain; InterPro: IPR007324 This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC

Probab=96.03  E-value=0.016  Score=41.31  Aligned_cols=52  Identities=21%  Similarity=0.317  Sum_probs=42.0

Q ss_pred             CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906           11 RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus        11 ~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      ...|++++..+.+.++++.++.|.+|++++..++.+..-             -++++|++.|..|
T Consensus       202 ~r~igi~l~~L~~i~~~I~va~G~~K~~aI~aALr~g~i-------------~~LItDe~tA~~l  253 (255)
T PF04198_consen  202 DRTIGISLEDLRKIPRVIAVAGGEEKAEAILAALRGGYI-------------NVLITDESTARAL  253 (255)
T ss_dssp             GGBSB--HHHHHTSSEEEEEE-SGGGHHHHHHHHHTTST-------------SEEEEEHHHHHHH
T ss_pred             CceeecCHHHHhCCCcEEEEcCchhhHHHHHHHHhcCCC-------------CEEEECHHHHHHH
Confidence            457888889999999999999999999999999998631             2468899998876

One of these proteins, Q8U7I7 from SWISSPROT, has an N-terminal helix-turn-helix IPR000792 from INTERPRO that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.; GO: 0030246 carbohydrate binding; PDB: 3KV1_A 3EFB_C 2W48_A 3BXH_A 3BXE_A 2OKG_A 3BXF_A 3BXG_A 2R5F_A 2O0M_A ....

>PRK15418 transcriptional regulator LsrR; Provisional

Probab=95.83  E-value=0.023  Score=41.84  Aligned_cols=54  Identities=22%  Similarity=0.231  Sum_probs=45.3

Q ss_pred             CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhh
Q psy906           11 RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV   77 (84)
Q Consensus        11 ~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~   77 (84)
                      ...|.+++..+.+.++++.++.|.+|++++..++.|..-             -++++|++.|..|..
T Consensus       262 ~r~igi~le~Lk~ip~~I~vA~G~~K~~Ai~aALrgg~i-------------~~LITDe~tA~~lL~  315 (318)
T PRK15418        262 NELIGLPLSSLKTIPTVIGVAGGEEKAEAIIAALKGGYI-------------NALVTDEKTARAILA  315 (318)
T ss_pred             cceecCCHHHHcCCCCEEEEecCHHHHHHHHHHHhcCCC-------------CEEEECHHHHHHHHH
Confidence            456788889999999999999999999999999998621             246889999987743

>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]

Probab=95.72  E-value=0.024  Score=42.14  Aligned_cols=54  Identities=22%  Similarity=0.275  Sum_probs=46.1

Q ss_pred             CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhh
Q psy906           11 RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV   77 (84)
Q Consensus        11 ~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~   77 (84)
                      ..-|++++..|.+..+++.++.|.+|++++..++.|..-             .+++.|+..|..|-.
T Consensus       265 ~r~igl~L~~l~~ip~vI~vAgG~~K~~AI~aaL~gg~~-------------n~LITDe~tA~~lL~  318 (321)
T COG2390         265 DRVIGLSLDDLRQIPKVIAVAGGESKAEAILAALRGGYI-------------NVLITDEATAEALLE  318 (321)
T ss_pred             CceecCCHHHHhcCCcEEEEeCCcccHHHHHHHHhCCCC-------------CEEEeCHHHHHHHHh
Confidence            567889999999999999999999999999999998631             346889999987643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	84
1ne7_A	289	Human Glucosamine-6-Phosphate Deaminase Isomerase A		5e-26
1hor_A	266	Structure And Catalytic Mechanism Of Glucosamine 6-		6e-17
1jt9_A	266	Structure Of The Mutant F174a T Form Of The Glucosa		6e-17
3hn6_A	289	Crystal Structure Of Glucosamine-6-phosphate Deamin		7e-15

>pdb|1NE7|A Chain A, Human Glucosamine-6-Phosphate Deaminase Isomerase At 1.75 A Resolution Complexed With N-Acetyl-Glucosamine-6-Phosphate And 2-Deoxy-2-Amino-Glucitol-6-Phosphate Length = 289

Iteration: 1
 Score =  112 bits (280), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 6   LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM 65
           L K+P    ++   +     +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ 
Sbjct: 178 LTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVF 237
Query: 66  ICDEDATQELRVKTVKYFK 84
           +CDEDAT EL+VKTVKYFK
Sbjct: 238 VCDEDATLELKVKTVKYFK 256

>pdb|1HOR|A Chain A, Structure And Catalytic Mechanism Of Glucosamine 6-phosphate Deaminase From Escherichia Coli At 2.1 Angstroms Resolution Length = 266

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
           +VMIL+ GS KA AL  A+E  VNHMWT+S  Q+HP  IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255

>pdb|1JT9|A Chain A, Structure Of The Mutant F174a T Form Of The Glucosamine-6-Phosphate Deaminase From E.Coli Length = 266

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 83
           +VMIL+ GS KA AL  A+E  VNHMWT+S  Q+HP  IM+CDE +T EL+VKT++YF
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255

>pdb|3HN6|A Chain A, Crystal Structure Of Glucosamine-6-phosphate Deaminase From Borrelia Burgdorferi Length = 289

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 8   KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 67
           K+P+   ++   +     +V+I++ G +KA AL  AIE+GVNHMWT+SA Q+H   I++ 
Sbjct: 201 KVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVS 260
Query: 68  DEDATQELRVKTVKYF 83
           D++AT EL+V TV+YF
Sbjct: 261 DKNATYELKVGTVEYF 276

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	84
1fs5_A	266	Glucosamine-6-phosphate deaminase; allosteric enzy	3e-27
3hn6_A	289	Glucosamine-6-phosphate deaminase; niaid, ssgcid,	8e-27
1ne7_A	289	Glucosamine-6-phosphate isomerase; V-type like all	3e-26
2ri0_A	234	Glucosamine-6-phosphate deaminase; carbohydrate me	1e-20
2bkx_A	242	Glucosamine-6-phosphate deaminase; hydrolase, subs	6e-19
3oc6_A	248	6-phosphogluconolactonase; ssgcid, structural geno	2e-09
3tx2_A	251	Probable 6-phosphogluconolactonase; ssgcid, hydrol	4e-08
3ico_A	268	6PGL, 6-phosphogluconolactonase; ssgcid, infectiou	1e-07
3eb9_A	266	6-phosphogluconolactonase; catalytic mechanism, pe	3e-06
3e15_A	312	Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluc	9e-06
3css_A	267	6-phosphogluconolactonase; structural genomics, me	1e-04
1y89_A	238	DEVB protein; structural genomics, protein structu	2e-04

>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A Length = 266

 Score = 98.6 bits (246), Expect = 3e-27
 Identities = 35/59 (59%), Positives = 45/59 (76%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
           +VMIL+ GS KA AL  A+E  VNHMWT+S  Q+HP  IM+CDE +T EL+VKT++YF 
Sbjct: 198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFN 256

>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi} Length = 289

 Score = 97.9 bits (244), Expect = 8e-27
 Identities = 32/59 (54%), Positives = 46/59 (77%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
           +V+I++ G +KA AL  AIE+GVNHMWT+SA Q+H   I++ D++AT EL+V TV+YF 
Sbjct: 219 EVLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVSDKNATYELKVGTVEYFN 277

>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1 Length = 289

 Score = 96.3 bits (240), Expect = 3e-26
 Identities = 50/59 (84%), Positives = 55/59 (93%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
           +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK
Sbjct: 198 EVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFK 256

>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A* Length = 234

 Score = 80.4 bits (199), Expect = 1e-20
 Identities = 14/50 (28%), Positives = 23/50 (46%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75
            ++++  G  KA A+   ++  V      S  Q HP  I+I DE A   +
Sbjct: 185 MILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAGI 234

>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A* Length = 242

 Score = 76.6 bits (189), Expect = 6e-19
 Identities = 13/46 (28%), Positives = 27/46 (58%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDA 71
           ++++LI+G  KA A+ K +E  ++  +  SA  +H    ++ D +A
Sbjct: 192 RILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREA 237

>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis} Length = 248

 Score = 50.7 bits (122), Expect = 2e-09
 Identities = 11/50 (22%), Positives = 22/50 (44%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75
           +V ++++G  KA A+  A+          +       T+ + DE A  +L
Sbjct: 199 EVWLVVSGEAKADAVAAAVGGADPVDIPAAGAVGRERTVWLVDEAAAAKL 248

>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus} Length = 251

 Score = 47.2 bits (113), Expect = 4e-08
 Identities = 11/50 (22%), Positives = 23/50 (46%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75
           +V ++++G  KA A+  A+          +  +    T+ + DE A  +L
Sbjct: 201 EVWLVVSGEAKADAVAAAVGGADPVDVPAAGAKGIERTVWLLDEAAASQL 250

>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis} Length = 268

 Score = 45.8 bits (109), Expect = 1e-07
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 75
           +V +L++G  KA A+  AI          +       T+ + D DA  +L
Sbjct: 217 EVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKL 266

>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A* Length = 266

 Score = 42.1 bits (99), Expect = 3e-06
 Identities = 7/51 (13%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQ-MHPCTIMICDEDATQEL 75
            V++L TG+ K + +   + +  +        +        + D++  + L
Sbjct: 213 NVIVLATGAEKKWVVDGILADTAHKAPVARFLRGCEGNVSFLLDKEIAENL 263

>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax} Length = 312

 Score = 40.6 bits (95), Expect = 9e-06
 Identities = 3/51 (5%), Positives = 12/51 (23%), Gaps = 4/51 (7%)

Query: 26  QVMILITGSHKAFALYKAIEEGVN----HMWTVSAFQMHPCTIMICDEDAT 72
             + L+  + K       + +        ++          T ++      
Sbjct: 246 SKIFLLNSTDKLDLWKNMLLKSYVDVNYCLYPAVYLIDSMNTTVVTCGYTN 296

>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A Length = 267

 Score = 37.6 bits (87), Expect = 1e-04
 Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAF--QMHPCTIMICDEDATQEL 75
            V++L  G  K + +   + E       VS F         ++ D  A + +
Sbjct: 214 HVVVLAAGKDKNWVVRGVLSESPTDPLPVSRFLRDCRGSVTLLLDPGAGEGV 265

>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str} Length = 238

 Score = 36.5 bits (85), Expect = 2e-04
 Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHM-WTVSAFQ-MHPCTIMICDEDATQEL 75
           ++  L+ G+ KA  + +        + +  +        T    D DA  ++
Sbjct: 186 RISYLVLGAGKAEIVEQIHTTPAEQLPYPAAKIHSTSGVTEWYLDSDAAAKI 237

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	84
3hn6_A	289	Glucosamine-6-phosphate deaminase; niaid, ssgcid,	99.92
3ico_A	268	6PGL, 6-phosphogluconolactonase; ssgcid, infectiou	99.89
3tx2_A	251	Probable 6-phosphogluconolactonase; ssgcid, hydrol	99.89
3oc6_A	248	6-phosphogluconolactonase; ssgcid, structural geno	99.89
3eb9_A	266	6-phosphogluconolactonase; catalytic mechanism, pe	99.88
3css_A	267	6-phosphogluconolactonase; structural genomics, me	99.86
1y89_A	238	DEVB protein; structural genomics, protein structu	99.84
1ne7_A	289	Glucosamine-6-phosphate isomerase; V-type like all	99.83
2bkx_A	242	Glucosamine-6-phosphate deaminase; hydrolase, subs	99.81
1fs5_A	266	Glucosamine-6-phosphate deaminase; allosteric enzy	99.81
2ri0_A	234	Glucosamine-6-phosphate deaminase; carbohydrate me	99.8
3e15_A	312	Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluc	99.77
1vl1_A	232	6PGL, 6-phosphogluconolactonase; TM1154, structura	99.75
3lwd_A	226	6-phosphogluconolactonase; structural genomics, JO	99.72
3lhi_A	232	Putative 6-phosphogluconolactonase; structural gen	99.7
3nwp_A	233	6-phosphogluconolactonase; structural genomics, jo	99.7
2r5f_A	264	Transcriptional regulator, putative; transcription	98.84
2gnp_A	266	Transcriptional regulator; structural genomics, MC	98.82
2w48_A	315	Sorbitol operon regulator; SORC, activator, repres	98.8
2okg_A	255	Central glycolytic gene regulator; alpha/beta/alph	98.79
2o0m_A	345	Transcriptional regulator, SORC family; structural	98.69
3nze_A	267	Putative transcriptional regulator, sugar-binding;	98.04
3kv1_A	267	Transcriptional repressor; alpha-beta structure, s	97.92
3efb_A	266	Probable SOR-operon regulator; alpha-beta-alpha sa	97.84

>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}

Probab=99.92  E-value=9.3e-26  Score=161.91  Aligned_cols=80  Identities=43%  Similarity=0.703  Sum_probs=76.7

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhcccC
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK   84 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~~   84 (84)
                      +.+++|++|||||++.|++||+|+|+++|++|+++|+++++|+++.++|+|+|+.|++++||+|++||+.|..++++||+
T Consensus       198 ~~~~~P~~rITl~l~~I~~Ar~i~lla~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~lD~~Aa~~L~~~~~~y~~  277 (289)
T 3hn6_A          198 DVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVSDKNATYELKVGTVEYFN  277 (289)
T ss_dssp             CTTTSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEESGGGTTSBHHHHHHHH
T ss_pred             CCCCCCCeEEECCHHHHHccCeEEEEEcChHHHHHHHHHHhCCCCcccChHHHccCCCEEEEEcHHHHccccHhHHHHHH
Confidence            57889999999999999999999999999999999999999998889999999999999999999999999999988874

>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}

Probab=99.89  E-value=1.8e-23  Score=148.68  Aligned_cols=72  Identities=22%  Similarity=0.165  Sum_probs=68.4

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   76 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~   76 (84)
                      +.+++|++|||||++.|++||+|+|+|+|++|+++|+++++|+.+.++|+|+|+.|++++||+|++||+.|+
T Consensus       196 ~~~~~P~~rITlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~lD~~Aa~~L~  267 (268)
T 3ico_A          196 DSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKLP  267 (268)
T ss_dssp             CCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCSSEEEEEEEHHHHTTCC
T ss_pred             CCCCCCCceEEEechhhhccceEEEEecCCCchHHHHHHhcCCCCccccccccccccceEEEecchhhhhCC
Confidence            357899999999999999999999999999999999999999988899999999999999999999999874

>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}

Probab=99.89  E-value=1.3e-23  Score=147.90  Aligned_cols=71  Identities=20%  Similarity=0.147  Sum_probs=67.6

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      +.+++|++|||||++.|++||+|+|+++|++|+++|+++++|+.+.++|+|+|+.|++++||+|++||+.|
T Consensus       180 ~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~~D~~Aa~~L  250 (251)
T 3tx2_A          180 DSPKPPPQRITLTLPAIQRSREVWLVVSGEAKADAVAAAVGGADPVDVPAAGAKGIERTVWLLDEAAASQL  250 (251)
T ss_dssp             CCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCSSEEEEEEETTTTTTC
T ss_pred             CCCCCCCcEEEECHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCCCCCCChHHhccCCCEEEEEeHHHHhhc
Confidence            45789999999999999999999999999999999999999988889999999999999999999999876

>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}

Probab=99.89  E-value=1.6e-23  Score=147.27  Aligned_cols=71  Identities=20%  Similarity=0.158  Sum_probs=67.3

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      +.+++|++|||||++.|++||+|+|+++|++|+++|+++++|+.+.++|+|+|+.|++++||+|++||+.|
T Consensus       178 ~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~~D~~Aa~~L  248 (248)
T 3oc6_A          178 DSPKPPPRRITLTLPAVQNSREVWLVVSGEAKADAVAAAVGGADPVDIPAAGAVGRERTVWLVDEAAAAKL  248 (248)
T ss_dssp             CCSSSSSCEEEECHHHHTTEEEEEEEECSGGGHHHHHHHHHTCCTTTSGGGGCCCSSEEEEEEETTTTTTC
T ss_pred             CCCCCCCcEEEcCHHHHHhhCeEEEEEeCHHHHHHHHHHHcCCCCCCCChHHhccCCCEEEEEchHHhhCC
Confidence            45789999999999999999999999999999999999999988889999999999999999999999865

>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*

Probab=99.88  E-value=3.9e-23  Score=146.47  Aligned_cols=70  Identities=13%  Similarity=0.147  Sum_probs=64.7

Q ss_pred             CCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceec-CCcEEEEEeHHHHhhhhh
Q psy906            8 KIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQM-HPCTIMICDEDATQELRV   77 (84)
Q Consensus         8 ~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~-h~~~~~~~D~~Aa~~l~~   77 (84)
                      ++|++|||||++.|++||+|+|+++|++|+++|+++++|+.++++|+|+||. |++++||+|++||+.|++
T Consensus       195 ~~P~~rITlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~pAs~l~~~h~~~~~~~D~~Aa~~L~~  265 (266)
T 3eb9_A          195 KPKVWRVTLSPATIMQARNVIVLATGAEKKWVVDGILADTAHKAPVARFLRGCEGNVSFLLDKEIAENLAK  265 (266)
T ss_dssp             SSCSCEEEECHHHHHTCSEEEEEECCGGGHHHHHHHHCSSCSSCCGGGGGGGCSSEEEEEEEHHHHC----
T ss_pred             CCCCeEEEcCHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCCCccchhHHhcCCCCCEEEEEcHHHhccccc
Confidence            8999999999999999999999999999999999999999888999999999 999999999999998853

>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A

Probab=99.86  E-value=5.9e-22  Score=140.19  Aligned_cols=72  Identities=15%  Similarity=0.148  Sum_probs=67.6

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCccccccccee-c-CCcEEEEEeHHHHhhhh
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQ-M-HPCTIMICDEDATQELR   76 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~-~-h~~~~~~~D~~Aa~~l~   76 (84)
                      +.+++|++|||||++.|++|++|+|+++|++|+++|+++++|+.+.++|+|+|+ . |++++||+|++||+.|.
T Consensus       193 ~~~~~p~~rITltl~~I~~A~~v~~la~G~~Ka~av~~~l~g~~~~~~Pas~l~~~~h~~~~~~~D~~Aa~~l~  266 (267)
T 3css_A          193 PTMSPKVWRVTLSKTVIQYAKHVVVLAAGKDKNWVVRGVLSESPTDPLPVSRFLRDCRGSVTLLLDPGAGEGVC  266 (267)
T ss_dssp             TTCSSCSCEEEECHHHHHHCSEEEEEECSGGGHHHHHHHHCSSCCSSCCGGGGGGGCSSEEEEEECTTTTTTTC
T ss_pred             CCCCCCCceEECCHHHHHcCCEEEEEEeCHHHHHHHHHHHcCCCCCcCCHHHhccCCCCCEEEEECHHHHhhcc
Confidence            457899999999999999999999999999999999999999887889999999 8 99999999999998763

>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}

Probab=99.84  E-value=2e-21  Score=135.13  Aligned_cols=69  Identities=13%  Similarity=0.055  Sum_probs=65.2

Q ss_pred             CCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcC-Ccccccccceec-CCcEEEEEeHHHHhhh
Q psy906            7 VKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEG-VNHMWTVSAFQM-HPCTIMICDEDATQEL   75 (84)
Q Consensus         7 ~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~-~~~~~Pas~l~~-h~~~~~~~D~~Aa~~l   75 (84)
                      +++|++|||||++.|++|++|+|+++|++|+++|+++++|+ .+.++|+|+|+. |++++||+|++||+.|
T Consensus       167 ~~~p~~rITltl~~i~~a~~vi~~a~G~~Ka~ai~~~l~~~~~~~~~Pas~l~~~~~~~~~~~D~~Aa~~l  237 (238)
T 1y89_A          167 PESGQLRVSKTAKVLQAAKRISYLVLGAGKAEIVEQIHTTPAEQLPYPAAKIHSTSGVTEWYLDSDAAAKI  237 (238)
T ss_dssp             TTTCCEEEEECHHHHHHSSEEEEEECSGGGHHHHHHHHHSCGGGCCCHHHHCCCSSSEEEEEEEHHHHTTT
T ss_pred             CCCCCCeEECCHHHHHhCCEEEEEEeCHHHHHHHHHHHhCCCCCccCCHHHHhcCCCCEEEEEChHHHhhc
Confidence            56899999999999999999999999999999999999995 677899999999 8999999999999876

>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1

Probab=99.83  E-value=5.1e-21  Score=136.41  Aligned_cols=79  Identities=66%  Similarity=1.003  Sum_probs=73.1

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhccc
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF   83 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~   83 (84)
                      +.+++|+.+||||++.|++|++++|+++|++|+++|+++++|+.+.++|+|+|+.|++++||+|++||+.|..++++|+
T Consensus       177 ~~~~vp~~~iTl~l~~l~~a~~vi~la~G~~Ka~ai~~al~g~~~~~~Pas~l~~h~~~~li~D~~aA~~L~~~~~~~~  255 (289)
T 1ne7_A          177 ELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYF  255 (289)
T ss_dssp             CGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEEGGGGTTSBHHHHHHH
T ss_pred             CCCCCCCEEEECCHHHHhcCCEEEEEEcCHHHHHHHHHHHhCCCCccCchHHHccCCCEEEEEcHHHHhhcccchhhhh
Confidence            3466899999999999999999999999999999999999998888999999999999999999999999977667775

>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*

Probab=99.81  E-value=1.4e-20  Score=130.05  Aligned_cols=69  Identities=20%  Similarity=0.329  Sum_probs=65.8

Q ss_pred             CCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906            7 VKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus         7 ~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      +++|++|||||++.|++|++++++++|++|+++++++++|+.+.++|+|+|+.|++++||+|++||+.|
T Consensus       173 ~~~p~~~itltl~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l  241 (242)
T 2bkx_A          173 DSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLR  241 (242)
T ss_dssp             GGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHTCCCTTSGGGGGGGCSSEEEEEETTTTTTC
T ss_pred             CCCCCccEEcCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCCcccHHHhccCCCEEEEEchHHhccC
Confidence            567899999999999999999999999999999999999988889999999999999999999999876

>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A

Probab=99.81  E-value=1.3e-20  Score=132.22  Aligned_cols=78  Identities=46%  Similarity=0.781  Sum_probs=71.8

Q ss_pred             CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhccc
Q psy906            6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF   83 (84)
Q Consensus         6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~   83 (84)
                      .+.+|+.+||||++.|++|++++++++|++|+++|+++++|+.+.++|+|+++.|++++||+|++||+.|..++++||
T Consensus       178 ~~~~p~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~li~D~~aA~~L~~~~~~~~  255 (266)
T 1fs5_A          178 VNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF  255 (266)
T ss_dssp             GGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHSCCCSSSGGGGGGGCSSEEEEECSGGGTTSBHHHHHHH
T ss_pred             cCCCCcEEEECChHHHhcCCEEEEEecChHHHHHHHHHhcCCCCCcCChHHHccCCCEEEEEeHHHhhhcccchHHHh
Confidence            355778888888999999999999999999999999999998888899999999999999999999999987777776

>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*

Probab=99.80  E-value=3.9e-20  Score=127.42  Aligned_cols=69  Identities=25%  Similarity=0.313  Sum_probs=65.1

Q ss_pred             CCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906            7 VKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus         7 ~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      +++|++|||||++.|++|++++++++|++|+++++++++|+.+.++|+|+|+.|++++||+|++||+.|
T Consensus       166 ~~~~~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l  234 (234)
T 2ri0_A          166 EDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAGI  234 (234)
T ss_dssp             GGSCCEEEECCHHHHHTSSEEEEEECSGGGHHHHHHHHHSCCCTTSGGGGGGGCSSEEEEEETTTTTTC
T ss_pred             cCCCCceEEeCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCCccchHHHhhCCCEEEEEchHHhccC
Confidence            347899999999999999999999999999999999999988889999999999999999999999864

>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}

Probab=99.77  E-value=2.8e-19  Score=129.73  Aligned_cols=66  Identities=9%  Similarity=-0.070  Sum_probs=61.8

Q ss_pred             CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHh-cCCcc---cccccceecCCcEEEEEeHHH
Q psy906            6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIE-EGVNH---MWTVSAFQMHPCTIMICDEDA   71 (84)
Q Consensus         6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~-~~~~~---~~Pas~l~~h~~~~~~~D~~A   71 (84)
                      .+++|++|||||++.|++|++|+|+|+|++|+++|+++++ |+++.   +||+|+||.|+++++++|..+
T Consensus       226 ~~~pP~~rITlt~~~I~~Ak~v~~lv~G~~Ka~av~~~l~~g~vt~~~~~~PAS~Lq~Hp~~~vv~~~~~  295 (312)
T 3e15_A          226 NNFDVRKRITVSLDLLGNASSKIFLLNSTDKLDLWKNMLLKSYVDVNYCLYPAVYLIDSMNTTVVTCGYT  295 (312)
T ss_dssp             CSTTCSEEEEECHHHHHTCSEEEEEECSHHHHHHHHHHHHHTTTTCCTTTCHHHHHHHTSCEEEEEESCT
T ss_pred             CCCCCCeEEEecHHHHhcCCeEEEEEcChHHHHHHHHHHHhCCCCCCcCccchHHHhhCCCEEEEEcCCc
Confidence            4667899999999999999999999999999999999999 98887   899999999999999998765

>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A

Probab=99.75  E-value=1.5e-18  Score=120.99  Aligned_cols=61  Identities=13%  Similarity=0.028  Sum_probs=57.5

Q ss_pred             CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeH
Q psy906            6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDE   69 (84)
Q Consensus         6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~   69 (84)
                      .+++|++|||||++.|++|++|+|+++|++|+++|+++++|+   .+|+|+|+.|++++||+|+
T Consensus       172 ~~~~p~~rITltl~~I~~A~~iilla~G~~Ka~av~~~l~g~---~~Pas~l~~h~~~~~~~D~  232 (232)
T 1vl1_A          172 SGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDT---PLPAYFVRGKEKTVWFVGK  232 (232)
T ss_dssp             BTTTTBCEEEECHHHHTTCSEEEEEEESHHHHHHHHHHHTTC---CCGGGGCCCSSEEEEEEEC
T ss_pred             CCCCCCCEEECCHHHHHhCCEEEEEEcCHHHHHHHHHHHhCC---CCChHHhCcCCCEEEEeCC
Confidence            467999999999999999999999999999999999999984   3999999999999999995

>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}

Probab=99.72  E-value=6.9e-18  Score=117.29  Aligned_cols=61  Identities=20%  Similarity=0.227  Sum_probs=55.7

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEE
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIM   65 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~   65 (84)
                      +.+++|++|||||++.|++||+|+|+++|++|+++|+++++|+.+.++|+|+|+.|+..++
T Consensus       163 ~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~v~  223 (226)
T 3lwd_A          163 HAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEALAGDDVRQLPIRAFLSQPIATY  223 (226)
T ss_dssp             CCTTSSSCEEEECHHHHTCBSCEEEEEESHHHHHHHHHHHHCCCTTTSTTHHHHTSCCEEE
T ss_pred             CCCCCCCcEEEcCHHHHHhhCeEEEEEECHHHHHHHHHHHcCCCCCcCChHHHhcCCCeEE
Confidence            4678999999999999999999999999999999999999998888999999999853333

>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}

Probab=99.70  E-value=1.1e-17  Score=116.36  Aligned_cols=57  Identities=21%  Similarity=0.251  Sum_probs=53.4

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCc
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPC   62 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~   62 (84)
                      +.+++|++|||||++.|++||+|+|+++|++|+++|+++++| .+.++|+|+|+.|++
T Consensus       167 ~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g-~~~~~Pas~l~~h~~  223 (232)
T 3lhi_A          167 TPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQG-ENREYPISLVLNHQG  223 (232)
T ss_dssp             CCSSSSSCEEEECHHHHHTCSEEEEEEESHHHHHHHHHHHTS-CCTTSTHHHHHTSTT
T ss_pred             CCCCCCCceEEecHHHHHhcCeEEEEEECHHHHHHHHHHHhC-CCccCcHHHHHhCCC
Confidence            457899999999999999999999999999999999999998 677899999999985

>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}

Probab=99.70  E-value=1.3e-17  Score=116.20  Aligned_cols=58  Identities=17%  Similarity=0.170  Sum_probs=54.5

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCc
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPC   62 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~   62 (84)
                      +.+++|++|||||++.|++||+|+|+++|++|+++|+++++|+.+.++|+|+|+.|++
T Consensus       167 ~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~  224 (233)
T 3nwp_A          167 NPTTAPHGRITLSKSAILNSRQIYLHLVGEQKLSVYRQALESDDVHAMPIRAVLAQRK  224 (233)
T ss_dssp             CCSSSSSCEEEECHHHHHSBSCEEEEEESHHHHHHHHHHHTCCCTTTCTTHHHHSCSS
T ss_pred             CCCCCCCceEECCHHHHHhhCeEEEEEECHHHHHHHHHHHhCCCCCCccHHHHHhCCC
Confidence            3478999999999999999999999999999999999999998888999999999874

>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8

Probab=98.84  E-value=5.8e-09  Score=73.26  Aligned_cols=56  Identities=20%  Similarity=0.167  Sum_probs=47.6

Q ss_pred             CCCC----CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906            7 VKIP----RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus         7 ~~~P----~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      +.+|    .+.||||+..|++++++++++.|.+|+++++.+++|+..             .++++|+++|..|
T Consensus       203 ~~V~~~~~~r~i~i~l~~l~~~~~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~L  262 (264)
T 2r5f_A          203 KPVLEEDEEFVVSMGLGKLRSINRVLGLAGGVRKVQAIKGALLGGYL-------------DVLITDVGTARGL  262 (264)
T ss_dssp             CBC-------CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHH
T ss_pred             CCCCCccccceecCCHHHHcCCCCEEEEEcCHHHHHHHHHHHhcCCC-------------CEEEECHHHHHHH
Confidence            4567    899999999999999999999999999999999999742             3789999999876

>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8

Probab=98.82  E-value=6.6e-09  Score=73.05  Aligned_cols=58  Identities=9%  Similarity=0.148  Sum_probs=51.6

Q ss_pred             CCCC----CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhh
Q psy906            7 VKIP----RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV   77 (84)
Q Consensus         7 ~~~P----~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~   77 (84)
                      +.+|    .+.|||++..|++++++++++.|++|+++++.+++|+..             .++++|+++|..|..
T Consensus       200 ~~V~~~~~~r~i~i~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~Ll~  261 (266)
T 2gnp_A          200 KEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRANLV-------------NHLITDKNTILKVLE  261 (266)
T ss_dssp             CCCCHHHHTTBCBCCHHHHTTSSEEEEECCSGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHHHH
T ss_pred             CCCCCccccceecCCHHHHcCCCCEEEEecChhhHHHHHHHHhcCCC-------------CEEEECHHHHHHHHh
Confidence            5578    899999999999999999999999999999999999742             378999999988643

>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}

Probab=98.80  E-value=7.4e-09  Score=73.84  Aligned_cols=56  Identities=9%  Similarity=0.071  Sum_probs=50.2

Q ss_pred             CCCC----CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906            7 VKIP----RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus         7 ~~~P----~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      +.+|    .+.||||+..|+++++++++|.|++|+++++.+++|+..             .++++|+++|..|
T Consensus       254 ~~v~~~~~~~~i~~~l~~i~~~~~ii~vA~G~~Ka~Ai~~al~g~~~-------------~~LitDe~aA~~l  313 (315)
T 2w48_A          254 GLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYI-------------NCLVTNRETAELL  313 (315)
T ss_dssp             CBCCCSSGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTSC-------------SEEEEEHHHHHHH
T ss_pred             CEeCCccccceecCCHHHHhCCCCEEEEecChHhHHHHHHHHhCCCC-------------CEEEECHHHHHHH
Confidence            4567    899999999999999999999999999999999999742             2789999999876

>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*

Probab=98.79  E-value=7.7e-09  Score=72.29  Aligned_cols=57  Identities=19%  Similarity=0.232  Sum_probs=50.2

Q ss_pred             CCCC-CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906            7 VKIP-RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   76 (84)
Q Consensus         7 ~~~P-~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~   76 (84)
                      +.+| .+.|||++..|++++++++++.|++|+++++.+++|+..             .++++|+++|..|.
T Consensus       195 ~~V~~~~~igi~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~LL  252 (255)
T 2okg_A          195 EVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKKPRN-------------TVLVTDEGAAKKLL  252 (255)
T ss_dssp             CEEEECSEEECCGGGGGGCSEEEEECCSGGGHHHHHHHTTSCCC-------------EEEEEEHHHHHHHH
T ss_pred             CCccCCceecCCHHHHhCCCCEEEEEcCHHHHHHHHHHHhCCCC-------------CEEEECHHHHHHHH
Confidence            3466 789999999999999999999999999999999999742             47899999998764

>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8

Probab=98.69  E-value=1.6e-08  Score=72.99  Aligned_cols=57  Identities=21%  Similarity=0.186  Sum_probs=50.2

Q ss_pred             CCCC-CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhc-CCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906            7 VKIP-RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEE-GVNHMWTVSAFQMHPCTIMICDEDATQELR   76 (84)
Q Consensus         7 ~~~P-~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~-~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~   76 (84)
                      +.+| .+.|||++..|+++++++++|.|.+|+++++.+++| +..             +++++|+++|..|.
T Consensus       282 ~~v~~~~~i~i~l~~l~~~~~vi~vA~G~~Ka~Ai~~al~g~~~~-------------~~LitDe~aA~~ll  340 (345)
T 2o0m_A          282 KVVYKIPRIGLQLKNLQEIPYVVAIAGGKTKAKAIRAYMKNAPKQ-------------TWLITDEAAANEIL  340 (345)
T ss_dssp             CEEEECCCSBCCGGGGGGCSEEEEECCSGGGHHHHHHHHTTSCTT-------------CEEEEEHHHHHHHT
T ss_pred             CCcCCCceecCCHHHHcCCCCEEEEEcChHHHHHHHHHHhCCCCC-------------eEEEECHHHHHHHH
Confidence            3456 779999999999999999999999999999999999 743             67899999998763

>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0

Probab=98.04  E-value=4.5e-06  Score=58.62  Aligned_cols=54  Identities=19%  Similarity=0.254  Sum_probs=47.3

Q ss_pred             CCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906           10 PRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   76 (84)
Q Consensus        10 P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~   76 (84)
                      +.+.|+|++..|+++++++.++.|.+|+++++.++.|+.-             .++++|+.+|..|.
T Consensus       209 ~~r~i~~~l~~l~~~~~vi~vA~G~~Ka~Ai~aal~g~~~-------------~~LITDe~tA~~lL  262 (267)
T 3nze_A          209 NERSTGPSHEQLRQVRRRICVVSGASKINGLQGALAAGLA-------------TDLILDEASARRLV  262 (267)
T ss_dssp             GGGCCSCCHHHHHTSSEEEEEECCGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHHT
T ss_pred             hcceecCChHHHccCCeEEEEeCChHHHHHHHHHHhcCCC-------------CEEEeCHHHHHHHH
Confidence            3788999999999999999999999999999999998631             34789999998764

>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0

Probab=97.92  E-value=1.1e-05  Score=56.63  Aligned_cols=54  Identities=17%  Similarity=0.200  Sum_probs=47.1

Q ss_pred             CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhh
Q psy906           11 RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV   77 (84)
Q Consensus        11 ~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~   77 (84)
                      ...|+|++..|+++++++.++.|.+|+++++.++.|..-             .++++|+.+|..|..
T Consensus       208 ~~~i~~~l~~l~~~~~~i~va~G~~K~~ai~~al~~~~~-------------~~LITDe~tA~~lL~  261 (267)
T 3kv1_A          208 GRVIGLEMEDLRQIPNVVAMASESRKALSIMGALRTGVI-------------DVLATSVSCAMALLN  261 (267)
T ss_dssp             GGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTSCC-------------SEEEEEHHHHHHHHH
T ss_pred             cceeecCHHHHcCCCcEEEEecChHHHHHHHHHHhcCCC-------------CEEEeCHHHHHHHHh
Confidence            478999999999999999999999999999999998631             347899999998754

>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8

Probab=97.84  E-value=1.1e-05  Score=56.54  Aligned_cols=52  Identities=8%  Similarity=0.036  Sum_probs=45.8

Q ss_pred             CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906           11 RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus        11 ~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      .+.|+|++..|+++++++.++.|.+|+++++.++.|..-             .++++|+.+|..|
T Consensus       213 ~r~i~~~l~~l~~~~~~i~va~G~~Ka~Ai~aal~g~~~-------------~~LITDe~tA~~l  264 (266)
T 3efb_A          213 EKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRGKYI-------------NCLVTNSSTAELL  264 (266)
T ss_dssp             GGBCBCCHHHHHTSSEEEEECCCSCSSCHHHHHHHTTSC-------------SEEEEEHHHHHHH
T ss_pred             cceecCCHHHHhCCCCEEEEecChHHHHHHHHHHhcCCC-------------CEEEeCHHHHHHH
Confidence            478999999999999999999999999999999998631             3468899998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	84
d1fsfa_	266	c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/i	3e-20
d1ne7a_	281	c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/i	3e-20

>d1fsfa_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Escherichia coli [TaxId: 562]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: Glucosamine 6-phosphate deaminase/isomerase NagB
species: Escherichia coli [TaxId: 562]

 Score = 79.4 bits (195), Expect = 3e-20
 Identities = 35/62 (56%), Positives = 45/62 (72%)

Query: 23  HFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKY 82
              +VMIL+ GS KA AL  A+E  VNHMWT+S  Q+HP  IM+CDE +T EL+VKT++Y
Sbjct: 195 DAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRY 254

Query: 83  FK 84
           F 
Sbjct: 255 FN 256

>d1ne7a_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Human (Homo sapiens) [TaxId: 9606]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: Glucosamine 6-phosphate deaminase/isomerase NagB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 3e-20
 Identities = 50/59 (84%), Positives = 55/59 (93%)

Query: 26  QVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 84
           +VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK
Sbjct: 198 EVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFK 256

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	84
d1ne7a_	281	Glucosamine 6-phosphate deaminase/isomerase NagB {	99.93
d1fsfa_	266	Glucosamine 6-phosphate deaminase/isomerase NagB {	99.92
d1vl1a_	218	6-phosphogluconolactonase {Thermotoga maritima [Ta	99.69
d2o0ma1	247	Transcriptional regulator EF1965 {Enterococcus fae	98.71
d2okga1	250	Central glycolytic gene regulator CggR {Bacillus s	98.21
d3efba1	255	Sor-operon regulator SorC {Shigella flexneri [TaxI	98.17
d2gnpa1	262	Transcriptional regulator SP0247 {Streptococcus pn	97.87
d2r5fa1	258	Transcriptional regulator PSPTO2395 {Pseudomonas s	97.48

>d1ne7a_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: Glucosamine 6-phosphate deaminase/isomerase NagB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.3e-27  Score=165.74  Aligned_cols=80  Identities=66%  Similarity=1.004  Sum_probs=76.3

Q ss_pred             CCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhcccC
Q psy906            5 GLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK   84 (84)
Q Consensus         5 ~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~~   84 (84)
                      +.+++|++|||||++.|++||+|+|+|+|++|+++|+++++|+.+.++|||+|+.|++++||+|++||+.|..+|++||+
T Consensus       177 ~~~~~P~~riTltl~~i~~Ak~iill~~G~~Ka~~v~~~l~~~~~~~~PAS~l~~h~~~~~~~D~~AAs~L~~~~~~~~~  256 (281)
T d1ne7a_         177 ELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFK  256 (281)
T ss_dssp             CGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEEGGGGTTSBHHHHHHHH
T ss_pred             CcCCCCceeeecCHHHHhhcceEEEEEeCccHHHHHHHHHcCCCCCccChHHHccCCCEEEEEeHHHHcCCchhHHHHHH
Confidence            45789999999999999999999999999999999999999998889999999999999999999999999999999873

>d1fsfa_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: Glucosamine 6-phosphate deaminase/isomerase NagB
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3e-26  Score=159.74  Aligned_cols=81  Identities=44%  Similarity=0.754  Sum_probs=77.2

Q ss_pred             CCCCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhhhhhccc
Q psy906            4 AGLVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF   83 (84)
Q Consensus         4 ~~~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~~~~~~~   83 (84)
                      .+.+++|++|||||++.|++|++|+|+++|++|+++|+++++|+.++++|+|+|+.|++++||+|++||+.|..++++||
T Consensus       176 ~~~~~~p~~riTltl~~i~~ak~i~ll~~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~AAs~L~~~~~~~~  255 (266)
T d1fsfa_         176 NDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF  255 (266)
T ss_dssp             TCTTTSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGSSSEEEEECSGGGTTSCHHHHHHH
T ss_pred             cCCCCCCccccccCHHHHhhcceEEEEEcCHHHHHHHHHHHcCCCCCcCchHHhccCCCEEEEEeHHHhcccchhhHHHH
Confidence            35688999999999999999999999999999999999999999888999999999999999999999999999999987


Q ss_pred             C
Q psy906           84 K   84 (84)
Q Consensus        84 ~   84 (84)
                      +
T Consensus       256 ~  256 (266)
T d1fsfa_         256 N  256 (266)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1vl1a_ c.124.1.1 (A:) 6-phosphogluconolactonase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: 6-phosphogluconolactonase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.69  E-value=1.5e-17  Score=112.73  Aligned_cols=61  Identities=13%  Similarity=0.028  Sum_probs=56.5

Q ss_pred             CCCCCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeH
Q psy906            6 LVKIPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDE   69 (84)
Q Consensus         6 ~~~~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~   69 (84)
                      .+++|.+|||||++.|++|++++|+++|++|+++|+++++|+   .+|+++|+.|.+++||+|+
T Consensus       158 ~~~~~~~RITltl~~i~~ak~i~ll~~G~~K~~~l~~~~~~~---~~Pa~~l~~~~~~~~~~Dk  218 (218)
T d1vl1a_         158 SGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDT---PLPAYFVRGKEKTVWFVGK  218 (218)
T ss_dssp             BTTTTBCEEEECHHHHTTCSEEEEEEESHHHHHHHHHHHTTC---CCGGGGCCCSSEEEEEEEC
T ss_pred             ccCCCCCeeecCHHHhhccCEEEEEEcCHHHHHHHHHHhcCC---CCChHHhcCCCCEEEEEcC
Confidence            456778899999999999999999999999999999999874   5999999999999999995

>d2o0ma1 c.124.1.8 (A:95-341) Transcriptional regulator EF1965 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Transcriptional regulator EF1965
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.71  E-value=6e-09  Score=70.25  Aligned_cols=54  Identities=22%  Similarity=0.211  Sum_probs=47.2

Q ss_pred             CeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906           11 RTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   76 (84)
Q Consensus        11 ~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~   76 (84)
                      ..+||++++.|+++++++++++|.+|+++++.++.|.            +.++++++|+++|..|-
T Consensus       193 ~~~i~i~l~~l~~~~~vi~va~G~~Ka~ai~aAL~gg------------~~~~~LitDe~tA~~lL  246 (247)
T d2o0ma1         193 IPRIGLQLKNLQEIPYVVAIAGGKTKAKAIRAYMKNA------------PKQTWLITDEAAANEIL  246 (247)
T ss_dssp             CCCSBCCGGGGGGCSEEEEECCSGGGHHHHHHHHTTS------------CTTCEEEEEHHHHHHHT
T ss_pred             cccccCCHHHHccCCeEEEEecChhHHHHHHHHHhcC------------CCCeEEEeCHHHHHHHh
Confidence            4579999999999999999999999999999999874            33567899999998763

>d2okga1 c.124.1.8 (A:89-338) Central glycolytic gene regulator CggR {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Central glycolytic gene regulator CggR
species: Bacillus subtilis [TaxId: 1423]

Probab=98.21  E-value=1e-06  Score=59.55  Aligned_cols=54  Identities=19%  Similarity=0.217  Sum_probs=46.5

Q ss_pred             CCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906           10 PRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   76 (84)
Q Consensus        10 P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~   76 (84)
                      +...|++++..|.+++++++++.|.+|+++++.++.|..             -.++++|+++|..|.
T Consensus       196 ~~r~i~i~l~~l~~~~~~i~vA~G~~K~~Ai~aAL~gg~-------------i~~LItDe~tA~~LL  249 (250)
T d2okga1         196 KVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKKPR-------------NTVLVTDEGAAKKLL  249 (250)
T ss_dssp             ECSEEECCGGGGGGCSEEEEECCSGGGHHHHHHHTTSCC-------------CEEEEEEHHHHHHHH
T ss_pred             cceeeccCHHHhccCCcEEEEECCcHhHHHHHHHHhcCC-------------CCEEEECHHHHHHHh
Confidence            347899999999999999999999999999999998842             245789999998763

>d3efba1 c.124.1.8 (A:11-265) Sor-operon regulator SorC {Shigella flexneri [TaxId: 623]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Sor-operon regulator SorC
species: Shigella flexneri [TaxId: 623]

Probab=98.17  E-value=3.9e-07  Score=61.57  Aligned_cols=55  Identities=7%  Similarity=0.039  Sum_probs=47.8

Q ss_pred             CCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhh
Q psy906            9 IPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   76 (84)
Q Consensus         9 ~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~   76 (84)
                      .+...|+++++.|++++++++++.|.+|+++++.++.|..            - .++++|+.+|..|-
T Consensus       200 ~~~r~i~i~l~~l~~~~~~I~vA~G~~Ka~aI~aaL~gg~------------~-~~LItDe~tA~~LL  254 (255)
T d3efba1         200 MSEKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRGKY------------I-NCLVTNSSTAELLL  254 (255)
T ss_dssp             TGGGBCBCCHHHHHTSSEEEEECCCSCSSCHHHHHHHTTS------------C-SEEEEEHHHHHHHH
T ss_pred             CCceeeecCHHHHccCCcEEEEecCchhHHHHHHHHhcCC------------C-CEEEeCHHHHHHHh
Confidence            5678899999999999999999999999999999999852            1 23789999998763

>d2gnpa1 c.124.1.8 (A:56-317) Transcriptional regulator SP0247 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Transcriptional regulator SP0247
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.87  E-value=8.4e-06  Score=55.32  Aligned_cols=55  Identities=9%  Similarity=0.144  Sum_probs=47.5

Q ss_pred             CCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhhhh
Q psy906           10 PRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV   77 (84)
Q Consensus        10 P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l~~   77 (84)
                      +...|++++..|.++++++.++.|++|+++++.++.|..-            + ++++|+++|..|..
T Consensus       204 ~~r~I~i~l~~lr~~~~~I~vA~G~~K~~aI~aAL~gg~i------------~-~LItDe~tA~~lL~  258 (262)
T d2gnpa1         204 QERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRANLV------------N-HLITDKNTILKVLE  258 (262)
T ss_dssp             HTTBCBCCHHHHTTSSEEEEECCSGGGHHHHHHHHHTTCC------------S-EEEEEHHHHHHHHH
T ss_pred             ccceeccCHHHHhcCCCEEEEecCchhHHHHHHHHhcCCC------------C-EEEeCHHHHHHHHh
Confidence            4578999999999999999999999999999999998631            1 46899999988754

>d2r5fa1 c.124.1.8 (A:59-316) Transcriptional regulator PSPTO2395 {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Transcriptional regulator PSPTO2395
species: Pseudomonas syringae [TaxId: 317]

Probab=97.48  E-value=8.2e-05  Score=50.25  Aligned_cols=54  Identities=20%  Similarity=0.156  Sum_probs=44.2

Q ss_pred             CCCeeEEEcchhhcccceEEEEEcChhHHHHHHHHHhcCCcccccccceecCCcEEEEEeHHHHhhh
Q psy906            9 IPRTEKSLYSSSSPHFSQVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   75 (84)
Q Consensus         9 ~P~~riTlt~~~I~~A~~v~~lv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~Aa~~l   75 (84)
                      .+...|++++..|.+.++++.++.|.+|+++++.++.|..-             -++++|+.+|..|
T Consensus       204 ~~~r~i~i~l~~l~~i~~~I~vA~G~~K~~aI~aAl~gg~i-------------~~LITDe~tA~~L  257 (258)
T d2r5fa1         204 DEEFVVSMGLGKLRSINRVLGLAGGVRKVQAIKGALLGGYL-------------DVLITDVGTARGL  257 (258)
T ss_dssp             ----CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHH
T ss_pred             cccceeecCHHHhccCCcEEEEecCchhHHHHHHHHhcCCC-------------CEEEECHHHHHhh
Confidence            35667999999999999999999999999999999998531             3468899999876