Psyllid ID: psy9280

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
Protein Sequence
MNKIFISALQTSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccEEEEEEEcccccEEEEEEccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcccHHHHccccHHHHHcccHHHHHHccHHHHHHHHHcccccEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHccccccccccHHHHHHHHcccccccEEEEEEcHHHcEEEEEEccHHHcccEcHHHHHHHHHHHHHHHHcccccEEEEEccccEEEccEcHHHHccccHHHHHHccccccHHHHHHccccEEEEEccEE
Coil and Loop (DISEMBL)
MNKIFISALQTSKhlfnngssIQAAHLYIIKYMSTVKFENILVDkvgknknvglvqlnrpksLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA
Flexible Loop (DISEMBL)
MNKIFISALQTSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA
Low Complexity Region (SEG)
MNKIFISALQTSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA
Disordered region (IsUnstruct)
***IFISALQTSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV****
Disordered Region (DISOPRED)
*********************************STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA
Disordered Region (DISEMBL)
MNKIFISALQTSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA
Disordered Region (DISPRO)
MNKIFISALQTSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNKIFISALQTSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	143	2.2.26 [Sep-21-2011]
Q8BH95	290	Enoyl-CoA hydratase, mito	yes	N/A	0.853	0.420	0.556	2e-35
P14604	290	Enoyl-CoA hydratase, mito	yes	N/A	0.790	0.389	0.584	1e-34
Q58DM8	290	Enoyl-CoA hydratase, mito	yes	N/A	0.783	0.386	0.589	4e-34
P30084	290	Enoyl-CoA hydratase, mito	yes	N/A	0.783	0.386	0.580	1e-33
Q5R646	290	Enoyl-CoA hydratase, mito	yes	N/A	0.783	0.386	0.580	3e-33
P34559	288	Probable enoyl-CoA hydrat	yes	N/A	0.734	0.364	0.552	3e-28
Q1ZXF1	277	Probable enoyl-CoA hydrat	yes	N/A	0.860	0.444	0.496	5e-27
Q52995	257	Probable enoyl-CoA hydrat	yes	N/A	0.734	0.408	0.481	3e-22
P64016	257	Probable enoyl-CoA hydrat	yes	N/A	0.734	0.408	0.425	2e-20
P64017	257	Probable enoyl-CoA hydrat	yes	N/A	0.734	0.408	0.425	2e-20

>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1 SV=1

 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 92/124 (74%), Gaps = 2/124 (1%)

Query: 20  SSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQ 79
           SS++   L   ++ S   F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++
Sbjct: 17  SSVRCPELR--RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALE 74

Query: 80  QFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV 139
            F+QD +V AIVLTG +KAFAAGADIKEM N+T+     +  L HWD+IT+ KKPVIAAV
Sbjct: 75  TFEQDPAVGAIVLTGGDKAFAAGADIKEMQNRTFQDCYSSKFLSHWDHITRVKKPVIAAV 134

Query: 140 NGYA 143
           NGYA
Sbjct: 135 NGYA 138

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.
Mus musculus (taxid: 10090)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 7

>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1 PE=1 SV=1

 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 66/113 (58%), Positives = 86/113 (76%)

Query: 31  KYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAI 90
           ++ S   F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++ F++D +V AI
Sbjct: 26  RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAI 85

Query: 91  VLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           VLTG EKAFAAGADIKEM N+T+        L HWD+IT+ KKPVIAAVNGYA
Sbjct: 86  VLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 138

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1

 Score =  143 bits (360), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 83/112 (74%)

Query: 32  YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
           + S+  FE I+  K G+N NVGL+QLNRPK+LNALC+ L+ E+  A+Q F++D +V AIV
Sbjct: 27  FASSAAFEYIITAKKGRNSNVGLIQLNRPKALNALCNGLIVELNQALQAFEEDPAVGAIV 86

Query: 92  LTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           LTG EK FAAGADIKEM + T+      G L HWD +T+ KKPVIAAVNGYA
Sbjct: 87  LTGGEKVFAAGADIKEMQSLTFQNCYSGGFLSHWDQLTRVKKPVIAAVNGYA 138

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1 SV=4

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 85/112 (75%)

Query: 32  YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
           + S   FE I+ +K GKN  VGL+QLNRPK+LNALCD L+ E+  A++ F++D +V AIV
Sbjct: 27  FASGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIV 86

Query: 92  LTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           LTG +KAFAAGADIKEM N ++     +  L+HWD++T+ KKPVIAAVNGYA
Sbjct: 87  LTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYA 138

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2 SV=1

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 85/112 (75%)

Query: 32  YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
           + S   FE I+ +K GKN  VGL+QLNRPK+LNALCD L+ E+  A++ F++D +V AIV
Sbjct: 27  FASGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIV 86

Query: 92  LTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           LTG +KAFAAGADIKEM N ++     +  L+HWD++T+ KKPVIAAVNGYA
Sbjct: 87  LTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQIKKPVIAAVNGYA 138

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis elegans GN=ech-6 PE=1 SV=1

 Score =  123 bits (309), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/105 (55%), Positives = 78/105 (74%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
           E I ++KVG+ +NV L++LNRPK+LNALC  L++E+A A++  D D SV AIV+TG+E+A
Sbjct: 32  EMIKIEKVGEKQNVALIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITGSERA 91

Query: 99  FAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           FAAGADIKEM N  +A       L +W  ++  KKPVIAAVNG+A
Sbjct: 92  FAAGADIKEMTNNEFATTFSGSFLSNWTAVSDVKKPVIAAVNGFA 136

Caenorhabditis elegans (taxid: 6239)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1

 Score =  119 bits (298), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/131 (49%), Positives = 79/131 (60%), Gaps = 8/131 (6%)

Query: 13  KHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVS 72
           K +    SS QA   Y  K   T   E        K   VGLV LNRPKSLNAL D L+S
Sbjct: 3   KQVIKTVSSSQAPKKYFFKQFCTSTTE--------KKGRVGLVTLNRPKSLNALSDGLIS 54

Query: 73  EVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAK 132
           E+ +AV+ F +D  V +I++TG+EKAFAAGADIKEM   T        LL  W ++TK +
Sbjct: 55  EINSAVKLFQEDKDVGSIIITGSEKAFAAGADIKEMEKVTLPDAYNNDLLAQWHDLTKIR 114

Query: 133 KPVIAAVNGYA 143
           KP+IAAVNGYA
Sbjct: 115 KPIIAAVNGYA 125

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Dictyostelium discoideum (taxid: 44689)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q52995|ECHH_RHIME Probable enoyl-CoA hydratase OS=Rhizobium meliloti (strain 1021) GN=fadB1 PE=3 SV=2

 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 74/108 (68%), Gaps = 3/108 (2%)

Query: 36  VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
           + +E +LV+  G+   VGL+ LNRP++LNAL   L+ E+ AA++ FD D +V AIVL G+
Sbjct: 1   MSYETLLVETQGR---VGLITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGS 57

Query: 96  EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           EKAFAAGADIKEM    +        L  W+++  A+KP+IAAV+G+A
Sbjct: 58  EKAFAAGADIKEMQGLDFVDGYLADFLGGWEHVANARKPMIAAVSGFA 105

Could possibly oxidize fatty acids using specific components.

Rhizobium meliloti (strain 1021) (taxid: 266834)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P64016|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis GN=echA8 PE=1 SV=1

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 3/108 (2%)

Query: 36  VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
           + +E ILV++   ++ VG++ LNRP++LNAL   +++EV +A  + D D  + AI++TG+
Sbjct: 1   MTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGS 57

Query: 96  EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            KAFAAGADIKEM + T+A          W  +   + P IAAV GYA
Sbjct: 58  AKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 105

Could possibly oxidize fatty acids using specific components.

Mycobacterium tuberculosis (taxid: 1773)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P64017|ECHA8_MYCBO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=echA8 PE=3 SV=1

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 3/108 (2%)

Query: 36  VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
           + +E ILV++   ++ VG++ LNRP++LNAL   +++EV +A  + D D  + AI++TG+
Sbjct: 1   MTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGS 57

Query: 96  EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            KAFAAGADIKEM + T+A          W  +   + P IAAV GYA
Sbjct: 58  AKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 105

Could possibly oxidize fatty acids using specific components.

Mycobacterium bovis (taxid: 1765)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
328708752	292	PREDICTED: probable enoyl-CoA hydratase,	0.776	0.380	0.639	2e-37
389608935	297	cyclohex-1-ene-1-carboxyl-CoA hydratase	0.972	0.468	0.55	2e-36
87248109	296	enoyl-CoA hydratase precursor 1 [Bombyx	0.916	0.442	0.557	9e-36
344253972	271	Enoyl-CoA hydratase, mitochondrial [Cric	0.853	0.450	0.564	8e-34
298104076	290	enoyl-CoA hydratase, mitochondrial [Sus	0.769	0.379	0.618	9e-34
354505918	269	PREDICTED: enoyl-CoA hydratase, mitochon	0.853	0.453	0.564	9e-34
49257190	290	Enoyl Coenzyme A hydratase, short chain,	0.853	0.420	0.556	1e-33
29789289	290	enoyl-CoA hydratase, mitochondrial precu	0.853	0.420	0.556	1e-33
261335974	297	putative enoyl-CoA hydratase precursor [	0.783	0.377	0.580	1e-33
26352205	153	unnamed protein product [Mus musculus] g	0.853	0.797	0.556	1e-33

>gi|328708752|ref|XP_003243793.1| PREDICTED: probable enoyl-CoA hydratase, mitochondrial-like [Acyrthosiphon pisum]

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 93/111 (83%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           +ST   E I+ +KVG+ +NVGLV+LNRPK+LNALCD LV+E+  AV  +D D S+ AIV+
Sbjct: 30  LSTCNLEYIITEKVGEKQNVGLVKLNRPKALNALCDGLVTELTEAVSAYDADDSIGAIVV 89

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           TG+E+AFAAGADIKEML++TY+ N+K GLL+ WDN++K KKPVIAAVNG+A
Sbjct: 90  TGSERAFAAGADIKEMLDKTYSTNLKIGLLKQWDNLSKCKKPVIAAVNGFA 140

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608935|dbj|BAM18079.1| cyclohex-1-ene-1-carboxyl-CoA hydratase [Papilio xuthus]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/140 (55%), Positives = 100/140 (71%), Gaps = 1/140 (0%)

Query: 5   FISALQTSKHLFNNGSSIQAAHLYIIKYMSTV-KFENILVDKVGKNKNVGLVQLNRPKSL 63
            +S +  SK++ N G     ++   IK+ ST  ++ENI +D VG  KNVGL+QLNRPK+L
Sbjct: 6   LVSRVILSKNVINTGRFATLSNTGFIKFYSTAPQYENIKIDVVGTKKNVGLIQLNRPKAL 65

Query: 64  NALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLE 123
           NALC  L  E+  AV  FD D S+AAI++TGNEKAFAAGADIKEM N TY++N K G L+
Sbjct: 66  NALCKPLFVELGKAVTDFDADQSIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKEGFLK 125

Query: 124 HWDNITKAKKPVIAAVNGYA 143
            W++I+   KPVIAAVNG+A
Sbjct: 126 EWEDISNCGKPVIAAVNGFA 145

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|87248109|gb|ABD36107.1| enoyl-CoA hydratase precursor 1 [Bombyx mori]

 Score =  154 bits (390), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 73/131 (55%), Positives = 94/131 (71%)

Query: 13  KHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVS 72
           K++ N    + A     +K+ ST  +ENI V+ VG  KNVGL+QLNRPK+LNALC  L  
Sbjct: 14  KNVLNKCKVVSATSQASMKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFV 73

Query: 73  EVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAK 132
           E+  AV  FD DS++AAI++TGNEKAFAAGADIKEM N TY++N K G L  W++I+   
Sbjct: 74  ELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCG 133

Query: 133 KPVIAAVNGYA 143
           KP+IAAVNG+A
Sbjct: 134 KPIIAAVNGFA 144

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|344253972|gb|EGW10076.1| Enoyl-CoA hydratase, mitochondrial [Cricetulus griseus]

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 90/124 (72%), Gaps = 2/124 (1%)

Query: 20  SSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQ 79
           SS++   L   ++ S   F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++
Sbjct: 17  SSVRCPELR--RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALE 74

Query: 80  QFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV 139
            F+ D +V AIVLTG EKAFAAGADIKEM NQT+     +  L HWD IT+ KKPVIAAV
Sbjct: 75  TFENDPAVGAIVLTGGEKAFAAGADIKEMQNQTFQDCYSSKFLSHWDQITRVKKPVIAAV 134

Query: 140 NGYA 143
           NGYA
Sbjct: 135 NGYA 138

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|298104076|ref|NP_001177104.1| enoyl-CoA hydratase, mitochondrial [Sus scrofa]

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 86/110 (78%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
           S+  FE+I+V K GK+ NVGL+QLNRPK+LNALC  L+ E+  A+Q F++D +V AIVLT
Sbjct: 29  SSAHFEHIVVAKKGKSSNVGLIQLNRPKALNALCKGLILELNQALQAFEEDPAVGAIVLT 88

Query: 94  GNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           G EKAFAAGADIKEM NQT+      G L HWD++++ +KPVIAAVNGYA
Sbjct: 89  GGEKAFAAGADIKEMQNQTFQDCYSGGFLSHWDHLSRVRKPVIAAVNGYA 138

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|354505918|ref|XP_003515014.1| PREDICTED: enoyl-CoA hydratase, mitochondrial-like, partial [Cricetulus griseus]

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 90/124 (72%), Gaps = 2/124 (1%)

Query: 20  SSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQ 79
           SS++   L   ++ S   F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++
Sbjct: 17  SSVRCPELR--RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALE 74

Query: 80  QFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV 139
            F+ D +V AIVLTG EKAFAAGADIKEM NQT+     +  L HWD IT+ KKPVIAAV
Sbjct: 75  TFENDPAVGAIVLTGGEKAFAAGADIKEMQNQTFQDCYSSKFLSHWDQITRVKKPVIAAV 134

Query: 140 NGYA 143
           NGYA
Sbjct: 135 NGYA 138

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|49257190|gb|AAH72658.1| Enoyl Coenzyme A hydratase, short chain, 1, mitochondrial [Mus musculus]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 92/124 (74%), Gaps = 2/124 (1%)

Query: 20  SSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQ 79
           SS++   L   ++ S   F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++
Sbjct: 17  SSVRCPELR--RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALE 74

Query: 80  QFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV 139
            F+QD +V AIVLTG +KAFAAGADIKEM N+T+     +  L HWD+IT+ KKPVIAAV
Sbjct: 75  TFEQDPAVGAIVLTGGDKAFAAGADIKEMQNRTFQDCYSSKFLSHWDHITRVKKPVIAAV 134

Query: 140 NGYA 143
           NGYA
Sbjct: 135 NGYA 138

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|29789289|ref|NP_444349.1| enoyl-CoA hydratase, mitochondrial precursor [Mus musculus] gi|62900285|sp|Q8BH95.1|ECHM_MOUSE RecName: Full=Enoyl-CoA hydratase, mitochondrial; AltName: Full=Enoyl-CoA hydratase 1; AltName: Full=Short-chain enoyl-CoA hydratase; Short=SCEH; Flags: Precursor gi|26333731|dbj|BAC30583.1| unnamed protein product [Mus musculus] gi|26336947|dbj|BAC32157.1| unnamed protein product [Mus musculus] gi|26352938|dbj|BAC40099.1| unnamed protein product [Mus musculus] gi|74191339|dbj|BAE39493.1| unnamed protein product [Mus musculus] gi|148685965|gb|EDL17912.1| enoyl Coenzyme A hydratase, short chain, 1, mitochondrial, isoform CRA_d [Mus musculus]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 92/124 (74%), Gaps = 2/124 (1%)

Query: 20  SSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQ 79
           SS++   L   ++ S   F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++
Sbjct: 17  SSVRCPELR--RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALE 74

Query: 80  QFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV 139
            F+QD +V AIVLTG +KAFAAGADIKEM N+T+     +  L HWD+IT+ KKPVIAAV
Sbjct: 75  TFEQDPAVGAIVLTGGDKAFAAGADIKEMQNRTFQDCYSSKFLSHWDHITRVKKPVIAAV 134

Query: 140 NGYA 143
           NGYA
Sbjct: 135 NGYA 138

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|261335974|emb|CBH09259.1| putative enoyl-CoA hydratase precursor [Heliconius melpomene] gi|261335983|emb|CBH09263.1| putative enoyl-CoA hydratase [Heliconius melpomene]

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 88/112 (78%)

Query: 32  YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
           Y S  ++ENI +D VG+ KNVGL+QLNRPK+LNALC+AL  E+ AAV+ FD D  +AAI+
Sbjct: 34  YSSAPQYENIKIDVVGQKKNVGLIQLNRPKALNALCNALFKELGAAVKDFDADEKIAAII 93

Query: 92  LTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +TGNEKAFAAGADIKEM + T ++  + G L+ W++++   KP+IAAVNG+A
Sbjct: 94  ITGNEKAFAAGADIKEMQDNTLSSTTREGFLQEWEDVSNCGKPIIAAVNGFA 145

Source: Heliconius melpomene

Species: Heliconius melpomene

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|26352205|dbj|BAC39739.1| unnamed protein product [Mus musculus] gi|148685964|gb|EDL17911.1| enoyl Coenzyme A hydratase, short chain, 1, mitochondrial, isoform CRA_c [Mus musculus]

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 92/124 (74%), Gaps = 2/124 (1%)

Query: 20  SSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQ 79
           SS++   L   ++ S   F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++
Sbjct: 17  SSVRCPELR--RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALE 74

Query: 80  QFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV 139
            F+QD +V AIVLTG +KAFAAGADIKEM N+T+     +  L HWD+IT+ KKPVIAAV
Sbjct: 75  TFEQDPAVGAIVLTGGDKAFAAGADIKEMQNRTFQDCYSSKFLSHWDHITRVKKPVIAAV 134

Query: 140 NGYA 143
           NGYA
Sbjct: 135 NGYA 138

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
UNIPROTKB|F1SAC1	289	ECHS1 "Uncharacterized protein	0.769	0.380	0.618	2.9e-32
MGI|MGI:2136460	290	Echs1 "enoyl Coenzyme A hydrat	0.853	0.420	0.556	2.9e-32
RGD|69330	290	Echs1 "enoyl CoA hydratase, sh	0.790	0.389	0.584	1.3e-31
UNIPROTKB|Q58DM8	290	ECHS1 "Enoyl-CoA hydratase, mi	0.783	0.386	0.589	3.3e-31
UNIPROTKB|P30084	290	ECHS1 "Enoyl-CoA hydratase, mi	0.783	0.386	0.580	4.2e-31
ZFIN|ZDB-GENE-030616-617	291	echs1 "enoyl Coenzyme A hydrat	0.769	0.378	0.609	5.4e-31
FB|FBgn0033879	295	CG6543 [Drosophila melanogaste	0.741	0.359	0.537	3.9e-28
WB|WBGene00001155	288	ech-6 [Caenorhabditis elegans	0.734	0.364	0.552	9.4e-27
DICTYBASE|DDB_G0285071	277	echs1 "enoyl-CoA hydratase" [D	0.860	0.444	0.503	3.6e-25
TIGR_CMR|CPS_1430	255	CPS_1430 "enoyl-CoA hydratase/	0.713	0.4	0.485	8e-21

UNIPROTKB|F1SAC1 ECHS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 68/110 (61%), Positives = 86/110 (78%)

Query:    34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
             S+  FE+I+V K GK+ NVGL+QLNRPK+LNALC  L+ E+  A+Q F++D +V AIVLT
Sbjct:    29 SSAHFEHIVVAKKGKSSNVGLIQLNRPKALNALCKGLILELNQALQAFEEDPAVGAIVLT 88

Query:    94 GNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             G EKAFAAGADIKEM NQT+      G L HWD++++ +KPVIAAVNGYA
Sbjct:    89 GGEKAFAAGADIKEMQNQTFQDCYSGGFLSHWDHLSRVRKPVIAAVNGYA 138

GO:0003824 "catalytic activity" evidence=IEA

MGI|MGI:2136460 Echs1 "enoyl Coenzyme A hydratase, short chain, 1, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 69/124 (55%), Positives = 92/124 (74%)

Query:    20 SSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQ 79
             SS++   L   ++ S   F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++
Sbjct:    17 SSVRCPELR--RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALE 74

Query:    80 QFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV 139
              F+QD +V AIVLTG +KAFAAGADIKEM N+T+     +  L HWD+IT+ KKPVIAAV
Sbjct:    75 TFEQDPAVGAIVLTGGDKAFAAGADIKEMQNRTFQDCYSSKFLSHWDHITRVKKPVIAAV 134

Query:   140 NGYA 143
             NGYA
Sbjct:   135 NGYA 138

GO:0003824 "catalytic activity" evidence=IEA

GO:0004300 "enoyl-CoA hydratase activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006635 "fatty acid beta-oxidation" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

RGD|69330 Echs1 "enoyl CoA hydratase, short chain, 1, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 66/113 (58%), Positives = 86/113 (76%)

Query:    31 KYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAI 90
             ++ S   F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++ F++D +V AI
Sbjct:    26 RFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAI 85

Query:    91 VLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             VLTG EKAFAAGADIKEM N+T+        L HWD+IT+ KKPVIAAVNGYA
Sbjct:    86 VLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 138

GO:0004300 "enoyl-CoA hydratase activity" evidence=IMP;IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA;TAS

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006635 "fatty acid beta-oxidation" evidence=IEA;IMP;TAS

UNIPROTKB|Q58DM8 ECHS1 "Enoyl-CoA hydratase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 66/112 (58%), Positives = 83/112 (74%)

Query:    32 YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
             + S+  FE I+  K G+N NVGL+QLNRPK+LNALC+ L+ E+  A+Q F++D +V AIV
Sbjct:    27 FASSAAFEYIITAKKGRNSNVGLIQLNRPKALNALCNGLIVELNQALQAFEEDPAVGAIV 86

Query:    92 LTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             LTG EK FAAGADIKEM + T+      G L HWD +T+ KKPVIAAVNGYA
Sbjct:    87 LTGGEKVFAAGADIKEMQSLTFQNCYSGGFLSHWDQLTRVKKPVIAAVNGYA 138

GO:0006635 "fatty acid beta-oxidation" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0004300 "enoyl-CoA hydratase activity" evidence=IEA

UNIPROTKB|P30084 ECHS1 "Enoyl-CoA hydratase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 65/112 (58%), Positives = 85/112 (75%)

Query:    32 YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
             + S   FE I+ +K GKN  VGL+QLNRPK+LNALCD L+ E+  A++ F++D +V AIV
Sbjct:    27 FASGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIV 86

Query:    92 LTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             LTG +KAFAAGADIKEM N ++     +  L+HWD++T+ KKPVIAAVNGYA
Sbjct:    87 LTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYA 138

GO:0006635 "fatty acid beta-oxidation" evidence=IEA;TAS

GO:0005739 "mitochondrion" evidence=IDA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0004300 "enoyl-CoA hydratase activity" evidence=TAS

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

ZFIN|ZDB-GENE-030616-617 echs1 "enoyl Coenzyme A hydratase, short chain, 1, mitochondrial" [Danio rerio (taxid:7955)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 67/110 (60%), Positives = 83/110 (75%)

Query:    34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
             S V++E ILVDK G+ KNVG +QLNRPK+LNALCD L+ EV  A+  F+ DS V AIV+T
Sbjct:    30 SGVQYEYILVDKKGEKKNVGFIQLNRPKALNALCDGLMLEVGKALDAFEMDSEVGAIVVT 89

Query:    94 GNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             G+EKAFAAGADIKEM N+T+        L HW+ ++  KKPVIAAVNG+A
Sbjct:    90 GSEKAFAAGADIKEMQNRTFQECYGGNFLAHWNRVSTVKKPVIAAVNGFA 139

GO:0008152 "metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

FB|FBgn0033879 CG6543 [Drosophila melanogaster (taxid:7227)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 57/106 (53%), Positives = 81/106 (76%)

Query:    38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
             +E I  +  G+ KNVG++ LNRPK+LNALC+ L+ E++ A+QQF +D +++AIVLTG+EK
Sbjct:    38 WEYIKTEVAGEGKNVGVITLNRPKALNALCNGLMKELSTALQQFSKDKTISAIVLTGSEK 97

Query:    98 AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             AFAAGADIKEM+  TY+  ++   L  W  + + +KP+IAAVNGYA
Sbjct:    98 AFAAGADIKEMVGNTYSQCIQGNFLNDWTEVARTQKPIIAAVNGYA 143

GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006635 "fatty acid beta-oxidation" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0005811 "lipid particle" evidence=IDA

GO:0005875 "microtubule associated complex" evidence=IDA

WB|WBGene00001155 ech-6 [Caenorhabditis elegans (taxid:6239)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 58/105 (55%), Positives = 78/105 (74%)

Query:    39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
             E I ++KVG+ +NV L++LNRPK+LNALC  L++E+A A++  D D SV AIV+TG+E+A
Sbjct:    32 EMIKIEKVGEKQNVALIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITGSERA 91

Query:    99 FAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             FAAGADIKEM N  +A       L +W  ++  KKPVIAAVNG+A
Sbjct:    92 FAAGADIKEMTNNEFATTFSGSFLSNWTAVSDVKKPVIAAVNGFA 136

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

DICTYBASE|DDB_G0285071 echs1 "enoyl-CoA hydratase" [Dictyostelium discoideum (taxid:44689)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 66/131 (50%), Positives = 81/131 (61%)

Query:    13 KHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVS 72
             K +    SS QA   Y  K   T   E     K G+   VGLV LNRPKSLNAL D L+S
Sbjct:     3 KQVIKTVSSSQAPKKYFFKQFCTSTTE-----KKGR---VGLVTLNRPKSLNALSDGLIS 54

Query:    73 EVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAK 132
             E+ +AV+ F +D  V +I++TG+EKAFAAGADIKEM   T        LL  W ++TK +
Sbjct:    55 EINSAVKLFQEDKDVGSIIITGSEKAFAAGADIKEMEKVTLPDAYNNDLLAQWHDLTKIR 114

Query:   133 KPVIAAVNGYA 143
             KP+IAAVNGYA
Sbjct:   115 KPIIAAVNGYA 125

GO:0008152 "metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004300 "enoyl-CoA hydratase activity" evidence=IEA;ISS

GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=IEA;ISS

GO:0016829 "lyase activity" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

TIGR_CMR|CPS_1430 CPS_1430 "enoyl-CoA hydratase/isomerase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 51/105 (48%), Positives = 69/105 (65%)

Query:    39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
             E ILV++    + VG++ L+RPKSLNAL   L  EV   ++ FD D ++ AIV+TG+ +A
Sbjct:     2 ETILVER---RERVGMITLHRPKSLNALSRQLAREVVDTLKTFDADDNIGAIVITGSARA 58

Query:    99 FAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             FAAGADI+EM N TYA      +   WD +    KP+IAAV+GYA
Sbjct:    59 FAAGADIEEMANLTYAEFYCDDIFAPWDELRSISKPIIAAVSGYA 103

GO:0003824 "catalytic activity" evidence=ISS

GO:0009062 "fatty acid catabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P34559	ECHM_CAEEL	4, ., 2, ., 1, ., 1, 7	0.5523	0.7342	0.3645	yes	N/A
Q5R646	ECHM_PONAB	4, ., 2, ., 1, ., 1, 7	0.5803	0.7832	0.3862	yes	N/A
Q8BH95	ECHM_MOUSE	4, ., 2, ., 1, ., 1, 7	0.5564	0.8531	0.4206	yes	N/A
P30084	ECHM_HUMAN	4, ., 2, ., 1, ., 1, 7	0.5803	0.7832	0.3862	yes	N/A
Q58DM8	ECHM_BOVIN	4, ., 2, ., 1, ., 1, 7	0.5892	0.7832	0.3862	yes	N/A
P14604	ECHM_RAT	4, ., 2, ., 1, ., 1, 7	0.5840	0.7902	0.3896	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	143
PRK05862	257	PRK05862, PRK05862, enoyl-CoA hydratase; Provision	1e-40
PRK09674	255	PRK09674, PRK09674, enoyl-CoA hydratase-isomerase;	5e-29
pfam00378	245	pfam00378, ECH, Enoyl-CoA hydratase/isomerase fami	6e-29
cd06558	195	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme	2e-27
PRK08138	261	PRK08138, PRK08138, enoyl-CoA hydratase; Provision	7e-26
COG1024	257	COG1024, CaiD, Enoyl-CoA hydratase/carnithine race	3e-24
PRK05809	260	PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydrata	1e-20
PRK06190	258	PRK06190, PRK06190, enoyl-CoA hydratase; Provision	6e-19
PRK06688	259	PRK06688, PRK06688, enoyl-CoA hydratase; Provision	7e-18
PLN02888	265	PLN02888, PLN02888, enoyl-CoA hydratase	6e-17
PRK07657	260	PRK07657, PRK07657, enoyl-CoA hydratase; Provision	6e-15
PRK06210	272	PRK06210, PRK06210, enoyl-CoA hydratase; Provision	7e-15
PRK05995	262	PRK05995, PRK05995, enoyl-CoA hydratase; Provision	1e-14
PRK07854	243	PRK07854, PRK07854, enoyl-CoA hydratase; Provision	2e-14
PRK05980	260	PRK05980, PRK05980, enoyl-CoA hydratase; Provision	3e-14
PRK05617	342	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrol	5e-14
PRK06494	259	PRK06494, PRK06494, enoyl-CoA hydratase; Provision	2e-13
PRK09245	266	PRK09245, PRK09245, enoyl-CoA hydratase; Provision	4e-13
PRK08260	296	PRK08260, PRK08260, enoyl-CoA hydratase; Provision	5e-13
PRK06023	251	PRK06023, PRK06023, enoyl-CoA hydratase; Provision	1e-12
PRK07509	262	PRK07509, PRK07509, enoyl-CoA hydratase; Provision	1e-12
PRK08139	266	PRK08139, PRK08139, enoyl-CoA hydratase; Validated	1e-12
PRK07658	257	PRK07658, PRK07658, enoyl-CoA hydratase; Provision	2e-12
PRK06495	257	PRK06495, PRK06495, enoyl-CoA hydratase; Provision	4e-12
PRK07799	263	PRK07799, PRK07799, enoyl-CoA hydratase; Provision	5e-12
PRK07468	262	PRK07468, PRK07468, enoyl-CoA hydratase; Provision	6e-12
PRK08272	302	PRK08272, PRK08272, enoyl-CoA hydratase; Provision	7e-12
PRK06143	256	PRK06143, PRK06143, enoyl-CoA hydratase; Provision	4e-11
PRK08140	262	PRK08140, PRK08140, enoyl-CoA hydratase; Provision	4e-11
PRK07659	260	PRK07659, PRK07659, enoyl-CoA hydratase; Provision	6e-11
PRK08259	254	PRK08259, PRK08259, enoyl-CoA hydratase; Provision	1e-10
PRK08252	254	PRK08252, PRK08252, enoyl-CoA hydratase; Provision	1e-10
PRK03580	261	PRK03580, PRK03580, carnitinyl-CoA dehydratase; Pr	1e-10
PRK05870	249	PRK05870, PRK05870, enoyl-CoA hydratase; Provision	2e-10
PRK06144	262	PRK06144, PRK06144, enoyl-CoA hydratase; Provision	4e-10
PRK09120	275	PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydrata	4e-10
PLN02874	379	PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrol	4e-10
PLN02988	381	PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrol	5e-10
PRK05864	276	PRK05864, PRK05864, enoyl-CoA hydratase; Provision	5e-10
PRK07827	260	PRK07827, PRK07827, enoyl-CoA hydratase; Provision	5e-10
PRK06142	272	PRK06142, PRK06142, enoyl-CoA hydratase; Provision	6e-10
TIGR01929	259	TIGR01929, menB, naphthoate synthase (dihydroxynap	1e-09
PLN02664	275	PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-d	1e-09
PRK05869	222	PRK05869, PRK05869, enoyl-CoA hydratase; Validated	2e-09
PLN02921	327	PLN02921, PLN02921, naphthoate synthase	3e-09
PRK06072	248	PRK06072, PRK06072, enoyl-CoA hydratase; Provision	5e-09
TIGR02280	256	TIGR02280, PaaB1, phenylacetate degradation probab	5e-09
PRK07511	260	PRK07511, PRK07511, enoyl-CoA hydratase; Provision	7e-09
PRK06127	269	PRK06127, PRK06127, enoyl-CoA hydratase; Provision	9e-09
PRK12478	298	PRK12478, PRK12478, enoyl-CoA hydratase; Provision	9e-09
PRK07938	249	PRK07938, PRK07938, enoyl-CoA hydratase; Provision	1e-08
PRK08150	255	PRK08150, PRK08150, enoyl-CoA hydratase; Provision	2e-08
TIGR03210	256	TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hyd	3e-08
PRK07327	268	PRK07327, PRK07327, enoyl-CoA hydratase; Provision	4e-08
PRK05981	266	PRK05981, PRK05981, enoyl-CoA hydratase; Provision	7e-08
PRK07396	273	PRK07396, PRK07396, dihydroxynaphthoic acid synthe	9e-08
PRK08290	288	PRK08290, PRK08290, enoyl-CoA hydratase; Provision	1e-07
COG0447	282	COG0447, MenB, Dihydroxynaphthoic acid synthase [C	2e-07
TIGR02441	737	TIGR02441, fa_ox_alpha_mit, fatty acid oxidation c	4e-07
PRK11730	715	PRK11730, fadB, multifunctional fatty acid oxidati	9e-07
PRK09076	258	PRK09076, PRK09076, enoyl-CoA hydratase; Provision	2e-06
PRK08258	277	PRK08258, PRK08258, enoyl-CoA hydratase; Provision	3e-06
TIGR02437	714	TIGR02437, FadB, fatty oxidation complex, alpha su	3e-06
PRK05674	265	PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydr	5e-06
PRK07260	255	PRK07260, PRK07260, enoyl-CoA hydratase; Provision	9e-06
PLN02851	407	PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrol	2e-05
PRK11154	708	PRK11154, fadJ, multifunctional fatty acid oxidati	2e-05
PRK07112	255	PRK07112, PRK07112, polyketide biosynthesis enoyl-	2e-05
PRK06563	255	PRK06563, PRK06563, enoyl-CoA hydratase; Provision	3e-05
TIGR03200	360	TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-car	6e-05
PLN02157	401	PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrol	1e-04
PRK06213	229	PRK06213, PRK06213, enoyl-CoA hydratase; Provision	2e-04
PRK07110	249	PRK07110, PRK07110, polyketide biosynthesis enoyl-	2e-04
PRK08321	302	PRK08321, PRK08321, naphthoate synthase; Validated	2e-04
PLN02600	251	PLN02600, PLN02600, enoyl-CoA hydratase	4e-04

>gnl|CDD|180295 PRK05862, PRK05862, enoyl-CoA hydratase; Provisional

 Score =  135 bits (343), Expect = 1e-40
 Identities = 56/106 (52%), Positives = 76/106 (71%), Gaps = 3/106 (2%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E ILV+  G+   VGL+ LNRPK+LNAL DAL+ E+ AA+  FD D  + AIV+TG+EK
Sbjct: 3   YETILVETRGR---VGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEK 59

Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           AFAAGADIKEM + ++    K   + +W+ + + +KPVIAAV GYA
Sbjct: 60  AFAAGADIKEMADLSFMDVYKGDYITNWEKVARIRKPVIAAVAGYA 105

Length = 257

>gnl|CDD|182026 PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional

 Score =  106 bits (265), Expect = 5e-29
 Identities = 38/92 (41%), Positives = 58/92 (63%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ 111
           V L+ LNRP++ NAL +AL++++   ++    D+S+   V+TGN + FAAGAD+ EM  +
Sbjct: 12  VLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEK 71

Query: 112 TYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             AA +     + W  +    KP+IAAVNGYA
Sbjct: 72  DLAATLNDPRPQLWQRLQAFNKPLIAAVNGYA 103

Length = 255

>gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family

 Score =  105 bits (264), Expect = 6e-29
 Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 2/101 (1%)

Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
                  V +++L+RP+++NAL   L++E+  A+++ +QD SV AIVLTG   AF+AGAD
Sbjct: 1   LYELEAGVAVIKLDRPEAVNALSAELLTELIQALEKLEQDPSVKAIVLTGGPGAFSAGAD 60

Query: 105 IKEMLNQTYA--ANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           IKEM  +  A  A       + W  +    KPVIAAVNGYA
Sbjct: 61  IKEMAAEPLAQQAQFSLEAQDLWSRLEDLPKPVIAAVNGYA 101

This family contains a diverse set of enzymes including: Enoyl-CoA hydratase. Napthoate synthase. Carnitate racemase. 3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA delta-isomerase. Length = 245

>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

 Score =   99 bits (250), Expect = 2e-27
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 7/107 (6%)

Query: 41  ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFA 100
           +LV++ G    V  + LNRP+  NAL   ++ E+AAA+ + + D  V  +VLTG  KAF 
Sbjct: 1   VLVERDG---GVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFC 57

Query: 101 AGADIKEMLNQTYAANVKTGLLEHWDNITKA----KKPVIAAVNGYA 143
           AGAD+KE+   + A       +     + +A     KPVIAAVNG A
Sbjct: 58  AGADLKELAALSDAGEEARAFIRELQELLRALLRLPKPVIAAVNGAA 104

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole. Length = 195

>gnl|CDD|236162 PRK08138, PRK08138, enoyl-CoA hydratase; Provisional

 Score = 97.8 bits (244), Expect = 7e-26
 Identities = 41/92 (44%), Positives = 54/92 (58%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ 111
           V L++LNRP++ NAL   +  ++A    +  +D  + AIVLTG EK FAAGADIKE    
Sbjct: 18  VALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATA 77

Query: 112 TYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
                       +W+ I +  KPVIAAVNGYA
Sbjct: 78  GAIEMYLRHTERYWEAIAQCPKPVIAAVNGYA 109

Length = 261

>gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

 Score = 93.2 bits (232), Expect = 3e-24
 Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 6/112 (5%)

Query: 35  TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG 94
              +E ILV++      + ++ LNRP+ LNAL   ++ E+A A+ + + D  V  +VLTG
Sbjct: 1   MTTYETILVERED---GIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTG 57

Query: 95  NEKAFAAGADIKEMLNQ---TYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             KAF+AGAD+KE+L+      A N+     +    +    KPVIAAVNGYA
Sbjct: 58  AGKAFSAGADLKELLSPEDGNAAENLMQPGQDLLRALADLPKPVIAAVNGYA 109

Length = 257

>gnl|CDD|180270 PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydratase; Validated

 Score = 84.0 bits (208), Expect = 1e-20
 Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 6/109 (5%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NE 96
            +N++++K G   ++ +V +NRPK+LNAL    + E+   +   + D +V A++LTG  E
Sbjct: 3   LKNVILEKEG---HIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGE 59

Query: 97  KAFAAGADIKEMLNQTYAANVKTGLLEH--WDNITKAKKPVIAAVNGYA 143
           KAF AGADI EM +       K GLL +  +  +    KPVIAA+NG+A
Sbjct: 60  KAFVAGADISEMKDLNEEEGRKFGLLGNKVFRKLENLDKPVIAAINGFA 108

Length = 260

>gnl|CDD|235733 PRK06190, PRK06190, enoyl-CoA hydratase; Provisional

 Score = 79.6 bits (197), Expect = 6e-19
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)

Query: 41  ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFA 100
           +LV+   +   V  + LNRP++ NAL  AL   + AA+ + D D  V  +VLTG + AF 
Sbjct: 6   LLVETHDR---VRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFC 62

Query: 101 AGADIKEMLNQTYAANVKTGLLEHWDNITKA----KKPVIAAVNGYA 143
           AG D+KE+     A   +  L     N + A    +KPVI A+NG A
Sbjct: 63  AGLDLKELGGDGSAYGAQDAL----PNPSPAWPAMRKPVIGAINGAA 105

Length = 258

>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional

 Score = 76.8 bits (190), Expect = 7e-18
 Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ 111
           V  + +NRP   NAL  A+   +A A++    D +V  +VLTG  +AF+AG DIK+    
Sbjct: 15  VLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKA 74

Query: 112 TYAANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
                    L         I    KPV+AAVNG A
Sbjct: 75  --PPKPPDELAPVNRFLRAIAALPKPVVAAVNGPA 107

Length = 259

>gnl|CDD|215480 PLN02888, PLN02888, enoyl-CoA hydratase

 Score = 74.4 bits (183), Expect = 6e-17
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 13/116 (11%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
             TV    ILV K      +  + +NRPK+LNAL   ++ E+AAA ++ D+D SV  I+L
Sbjct: 3   TQTVSENLILVPK--SRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIIL 60

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTG--LLEHWDNIT---KAKKPVIAAVNGYA 143
           TG+ +AF +G D+      T A  V  G       D +    + +KP+I A+NG+A
Sbjct: 61  TGSGRAFCSGVDL------TAAEEVFKGDVKDVETDPVAQMERCRKPIIGAINGFA 110

Length = 265

>gnl|CDD|181069 PRK07657, PRK07657, enoyl-CoA hydratase; Provisional

 Score = 69.0 bits (169), Expect = 6e-15
 Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 5/108 (4%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEK 97
           +NI VD V    +V  + LNRP++ NAL  AL+ E+   + Q +++++V  ++LTG  EK
Sbjct: 3   QNISVDYV--TPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEK 60

Query: 98  AFAAGADIKEM--LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           AF AGAD+KE   +N+    +  + +    + + +  +PVIAA+NG A
Sbjct: 61  AFCAGADLKERAGMNEEQVRHAVSLIRTTMEMVEQLPQPVIAAINGIA 108

Length = 260

>gnl|CDD|180472 PRK06210, PRK06210, enoyl-CoA hydratase; Provisional

 Score = 69.0 bits (169), Expect = 7e-15
 Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 18/118 (15%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           ++ +L +    +  V ++ LNRP  LNA    + +EV AA+ + + D +V  IVLTG  +
Sbjct: 4   YDAVLYE--VADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGR 61

Query: 98  AFAAGADIKEMLNQTYAANVKTG--------LLEHWDNITKA------KKPVIAAVNG 141
            F AGAD+ E+  QT   +                 D  T+       +KPVIAA+NG
Sbjct: 62  GFCAGADMGEL--QTIDPSDGRRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIAAING 117

Length = 272

>gnl|CDD|235664 PRK05995, PRK05995, enoyl-CoA hydratase; Provisional

 Score = 68.0 bits (167), Expect = 1e-14
 Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 8/109 (7%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E + +++ G+   V  V LNRP   NA  + +++E+ AA +  D D SV A+VL G  K
Sbjct: 3   YETLEIEQRGQ---VATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGK 59

Query: 98  AFAAGADI---KEMLNQTYAANVKTG--LLEHWDNITKAKKPVIAAVNG 141
           AF AGAD+   K+M   +   N      L +    I +  KPVIA V+G
Sbjct: 60  AFCAGADLNWMKKMAGYSDDENRADARRLADMLRAIYRCPKPVIARVHG 108

Length = 262

>gnl|CDD|236115 PRK07854, PRK07854, enoyl-CoA hydratase; Provisional

 Score = 67.4 bits (165), Expect = 2e-14
 Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
            V  ++L RP+  NAL   L  E+  AV++   D S  AIVLTG    F AGAD+     
Sbjct: 9   QVLTIELQRPERRNALNAELCEELREAVRKAV-DESARAIVLTGQGTVFCAGADLS---G 64

Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             YA +    L+E    I  A  PVIAA+NG A
Sbjct: 65  DVYADDFPDALIEMLHAIDAAPVPVIAAINGPA 97

Length = 243

>gnl|CDD|180335 PRK05980, PRK05980, enoyl-CoA hydratase; Provisional

 Score = 66.7 bits (163), Expect = 3e-14
 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 21/106 (19%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEMLN 110
           + L+ LNRP+ LNAL  AL+  + A +   + D SV A++LTG  ++AF+AGADI E  +
Sbjct: 13  IALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHE-FS 71

Query: 111 QTYAANVKTGL-------------LEHWDNITKAKKPVIAAVNGYA 143
            + AA     L             LE +       KPVIAAVNG A
Sbjct: 72  ASVAAGADVALRDFVRRGQAMTARLEAF------PKPVIAAVNGLA 111

Length = 260

>gnl|CDD|235533 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional

 Score = 67.2 bits (165), Expect = 5e-14
 Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIK 106
           VG++ LNRPK+LNAL   ++  + AA+  ++ D +VAA+V+ G  E+ F AG DI+
Sbjct: 13  VGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIR 68

Length = 342

>gnl|CDD|180591 PRK06494, PRK06494, enoyl-CoA hydratase; Provisional

 Score = 64.7 bits (158), Expect = 2e-13
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGA 103
            V +  +V +V LNRP+ +NAL      E+      F  D      ++TG  +KAF+AG 
Sbjct: 7   TVERKGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGN 66

Query: 104 DIKEMLNQTYAANVKTG---LLEHWDNITKAKKPVIAAVNGYA 143
           D+KE          ++G   L   +D      KP+IAAVNG A
Sbjct: 67  DLKEQAAGGKRGWPESGFGGLTSRFD----LDKPIIAAVNGVA 105

Length = 259

>gnl|CDD|181723 PRK09245, PRK09245, enoyl-CoA hydratase; Provisional

 Score = 63.8 bits (156), Expect = 4e-13
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 13/113 (11%)

Query: 41  ILVDKVGKNKNVGLVQLNRPKSLNALCD-ALVSEVAAAVQQFDQDSSVAAIVLTGNEKAF 99
           +LV++ G   ++  + +NRP++ NAL D   V  + AA    + D SV A++LTG   AF
Sbjct: 5   LLVERDG---HIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAF 61

Query: 100 AAGADIKEMLNQTYA-----ANVKTGLLEHWDNITKA----KKPVIAAVNGYA 143
           ++G ++K+M  +  A     A+++ G       I  A    + PVIAAVNG A
Sbjct: 62  SSGGNVKDMRARVGAFGGSPADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPA 114

Length = 266

>gnl|CDD|236206 PRK08260, PRK08260, enoyl-CoA hydratase; Provisional

 Score = 63.9 bits (156), Expect = 5e-13
 Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 24/126 (19%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E I  D       +  + LNRP  LNA    +  E+  A    D D +V A+++TG  +
Sbjct: 3   YETIRYDV---ADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGR 59

Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEHWDN--------------------ITKAKKPVIA 137
           AF AGAD+    N T+  +     +E  +                     I  + KPVIA
Sbjct: 60  AFCAGADLSAGGN-TFDLDAPRTPVEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIA 118

Query: 138 AVNGYA 143
           AVNG A
Sbjct: 119 AVNGPA 124

Length = 296

>gnl|CDD|168351 PRK06023, PRK06023, enoyl-CoA hydratase; Provisional

 Score = 62.5 bits (152), Expect = 1e-12
 Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 5/108 (4%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
           ++ILV++ G +  V +++ NRP+  NA+  A+ + +A A++  D D ++ A V  G E  
Sbjct: 3   DHILVERPGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGC 62

Query: 99  FAAGADIKEMLNQTYAANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
           F+AG D+++ L    A    +   E  D    + +A+KP+++ V+G A
Sbjct: 63  FSAGNDMQDFL--AAAMGGTSFGSEILDFLIALAEAEKPIVSGVDGLA 108

Length = 251

>gnl|CDD|181008 PRK07509, PRK07509, enoyl-CoA hydratase; Provisional

 Score = 62.6 bits (153), Expect = 1e-12
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 13/110 (11%)

Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
            V     +  V+LNRP  +NAL  A+  E+ A +++  +D  + A++L+G   AF AG D
Sbjct: 6   SVTIEDGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLD 65

Query: 105 IKEMLNQTY-AANVKTGLLEHWDNITKAKK----------PVIAAVNGYA 143
           +K + +    A  +    L    N+  A++          PVIAA+ G  
Sbjct: 66  VKSVASSPGNAVKLLFKRLPGNANL--AQRVSLGWRRLPVPVIAALEGVC 113

Length = 262

>gnl|CDD|181249 PRK08139, PRK08139, enoyl-CoA hydratase; Validated

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 57  LNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML---NQTY 113
           LNRP++ NAL +A+++ + AA+     D SV  +VL    KAF AG D+KEM       Y
Sbjct: 26  LNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAARGLAY 85

Query: 114 AANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
              +          I    +PVIA V+G A
Sbjct: 86  FRALFARCSRVMQAIVALPQPVIARVHGIA 115

Length = 266

>gnl|CDD|181070 PRK07658, PRK07658, enoyl-CoA hydratase; Provisional

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML-- 109
           V ++ LN P + NAL   ++ E++  + Q ++D +V  +V+ G  + F+AGADIKE    
Sbjct: 12  VAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSV 70

Query: 110 --NQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
              +      + G +  ++ + K  KPVIAA++G A
Sbjct: 71  TEAEQATELAQLGQVT-FERVEKFSKPVIAAIHGAA 105

Length = 257

>gnl|CDD|168580 PRK06495, PRK06495, enoyl-CoA hydratase; Provisional

 Score = 61.2 bits (149), Expect = 4e-12
 Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 9/99 (9%)

Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
           +V +V L+ P  +NAL   L  E+ A   +  +   V  +VLTG  K F AGAD+K   +
Sbjct: 13  HVAVVTLDNP-PVNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPD 71

Query: 111 ------QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
                    A N +T   E +  I +  KPVIAAVNG A
Sbjct: 72  VIKGPGDLRAHNRRT--RECFHAIRECAKPVIAAVNGPA 108

Length = 257

>gnl|CDD|181122 PRK07799, PRK07799, enoyl-CoA hydratase; Provisional

 Score = 60.9 bits (148), Expect = 5e-12
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 13/99 (13%)

Query: 54  LVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ-- 111
           +V +NRP++ NAL   ++  +  A  + D D  + + +LTG   AF AG D+K    +  
Sbjct: 17  IVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPP 76

Query: 112 -------TYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
                  +Y  +    LL+      +  KP+IAAV G A
Sbjct: 77  GDSFKDGSYDPSRIDALLKG----RRLTKPLIAAVEGPA 111

Length = 263

>gnl|CDD|180987 PRK07468, PRK07468, enoyl-CoA hydratase; Provisional

 Score = 60.5 bits (147), Expect = 6e-12
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           FE I +      + V  + LNRP+  NAL   +++E+  A ++   D++V  +VLTG  K
Sbjct: 3   FETIRIA--VDARGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGK 60

Query: 98  AFAAGADIKEMLNQTYA-----ANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +F AG D+  M  Q  A           L      +    KP+I  + G A
Sbjct: 61  SFCAGGDLGWMRAQMTADRATRIEEARRLAMMLKALNDLPKPLIGRIQGQA 111

Length = 262

>gnl|CDD|236213 PRK08272, PRK08272, enoyl-CoA hydratase; Provisional

 Score = 60.8 bits (148), Expect = 7e-12
 Identities = 34/138 (24%), Positives = 52/138 (37%), Gaps = 35/138 (25%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           + T+ +E            +  + LNRP+  NA+      E+ AAV++ D D  V  I++
Sbjct: 9   LKTMTYE--------VTGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILV 60

Query: 93  TGNEKAFAAGADIKEMLNQ------TYAANVKTGLLEH-----WDNIT------------ 129
           +G  K F AG D+              A   K   + H     WD +             
Sbjct: 61  SGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGF 120

Query: 130 ----KAKKPVIAAVNGYA 143
                A KP +A V+GY 
Sbjct: 121 MSLWHAHKPTVAKVHGYC 138

Length = 302

>gnl|CDD|180423 PRK06143, PRK06143, enoyl-CoA hydratase; Provisional

 Score = 58.5 bits (142), Expect = 4e-11
 Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEM-- 108
           V  + +    SLN L   ++  +  A++    D  V  +VL G  EKAF  GADIKEM  
Sbjct: 17  VATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMAT 76

Query: 109 LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           L+Q  A    + L +  D +     PVIA + G+ 
Sbjct: 77  LDQASAEAFISRLRDLCDAVRHFPVPVIARIPGWC 111

Length = 256

>gnl|CDD|236163 PRK08140, PRK08140, enoyl-CoA hydratase; Provisional

 Score = 58.4 bits (142), Expect = 4e-11
 Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 10/112 (8%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E IL+        V  + LNRP  LN+    +  E+  A+ Q  +D    A++LTG  +
Sbjct: 3   YETILLAIEA---GVATLTLNRPDKLNSFTREMHRELREALDQV-EDDGARALLLTGAGR 58

Query: 98  AFAAGADIKEMLNQTYAANVKTG-LLEHWDN-----ITKAKKPVIAAVNGYA 143
            F AG D+ +       A    G  +E + N     +     PVIAAVNG A
Sbjct: 59  GFCAGQDLADRDVTPGGAMPDLGESIETFYNPLVRRLRALPLPVIAAVNGVA 110

Length = 262

>gnl|CDD|236073 PRK07659, PRK07659, enoyl-CoA hydratase; Provisional

 Score = 58.1 bits (141), Expect = 6e-11
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 9/113 (7%)

Query: 35  TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG 94
           T K E++    V     V  + LNRP++LNAL + ++ E+  A+++   +SS   +VL G
Sbjct: 2   TSKMESV---VVKYEGRVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRG 57

Query: 95  NEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKA----KKPVIAAVNGYA 143
           N + F+AG DIK ML+    +     ++     I        K  I+A++G A
Sbjct: 58  NGRGFSAGGDIKMMLSSNDESKFDG-VMNTISEIVVTLYTMPKLTISAIHGPA 109

Length = 260

>gnl|CDD|236205 PRK08259, PRK08259, enoyl-CoA hydratase; Provisional

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 10/103 (9%)

Query: 46  VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI 105
           V +N  V  V LNRP+  NA+     + +A A + FD D + +  VL G    F AGAD+
Sbjct: 7   VERNGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADL 66

Query: 106 KEMLNQTYAANVKTGLLEHWDN---ITKAK--KPVIAAVNGYA 143
           K +            L    D     ++ +  KPVIAAV+GYA
Sbjct: 67  KAV-----GTGRGNRLHPSGDGPMGPSRMRLSKPVIAAVSGYA 104

Length = 254

>gnl|CDD|181325 PRK08252, PRK08252, enoyl-CoA hydratase; Provisional

 Score = 56.9 bits (138), Expect = 1e-10
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 9/107 (8%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
           + +LV++ G    V ++ +NRP++ NA+  A+   +AAA+ + D D  ++  +LTG    
Sbjct: 3   DEVLVERRG---RVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGT 59

Query: 99  FAAGADIKEMLNQTYAANVKTGLLEHWDNITKA--KKPVIAAVNGYA 143
           F AG D+K        +    G       +T+   +KP+IAAV GYA
Sbjct: 60  FCAGMDLKAFARGERPSIPGRGFG----GLTERPPRKPLIAAVEGYA 102

Length = 254

>gnl|CDD|179599 PRK03580, PRK03580, carnitinyl-CoA dehydratase; Provisional

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 13/96 (13%)

Query: 55  VQLNRPKSLNALCDALVS-EVAAAVQQFDQDSSV-AAIVLTGNEKAFAAGADIK-----E 107
           + L+RPK+ NA+ DA  S  +      F  D  +  AI+    EK F+AG D+K     E
Sbjct: 16  ITLDRPKA-NAI-DAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGE 73

Query: 108 MLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             +  +      GL E +D      KPVIAAVNGYA
Sbjct: 74  APDADFGPGGFAGLTEIFD----LDKPVIAAVNGYA 105

Length = 261

>gnl|CDD|180298 PRK05870, PRK05870, enoyl-CoA hydratase; Provisional

 Score = 56.3 bits (136), Expect = 2e-10
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 4/95 (4%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ 111
           V L+ +N P   NA+   + +++ AAV   + D  V A+V+TG  KAF AGAD+   L  
Sbjct: 13  VALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTA-LGA 71

Query: 112 TYAANVKTGLLEHWDN---ITKAKKPVIAAVNGYA 143
                 + GL   +D    +     P IAAVNG A
Sbjct: 72  APGRPAEDGLRRIYDGFLAVASCPLPTIAAVNGAA 106

Length = 249

>gnl|CDD|180424 PRK06144, PRK06144, enoyl-CoA hydratase; Provisional

 Score = 55.8 bits (135), Expect = 4e-10
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 12/101 (11%)

Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKEML 109
            +  +  NRP + NA+  A+   +A   +    D S+ A+VL G  +KAF AG DI +  
Sbjct: 17  GIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFR 76

Query: 110 NQT-------YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             +       Y   +   L      + + + P IAA+ G  
Sbjct: 77  AFSTAEDAVAYERRIDRVL----GALEQLRVPTIAAIAGAC 113

Length = 262

>gnl|CDD|236383 PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydratase/lyase; Validated

 Score = 55.8 bits (135), Expect = 4e-10
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 6/95 (6%)

Query: 55  VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA 114
           V LNRP+  NA+   L  E+   +   + D     +VLTG   A++AG D+KE   +T A
Sbjct: 21  VTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDA 80

Query: 115 ----ANVKTGL--LEHWDNITKAKKPVIAAVNGYA 143
                  +        W  +   +KP IA VNG+ 
Sbjct: 81  QPEILQERIRREAYGWWRRLRWYQKPTIAMVNGWC 115

Length = 275

>gnl|CDD|178462 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score = 56.0 bits (135), Expect = 4e-10
 Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 3/68 (4%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
           E +L ++ G    V ++ LNRP+ LN +  ++VS +A  ++Q+++D SV  I++ G  +A
Sbjct: 11  EVVLGEEKG---RVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRA 67

Query: 99  FAAGADIK 106
           F+AG D+K
Sbjct: 68  FSAGGDLK 75

Length = 379

>gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase

 Score = 55.9 bits (134), Expect = 5e-10
 Identities = 25/75 (33%), Positives = 42/75 (56%)

Query: 46  VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI 105
           V +  +V ++ LNRPK LNAL   ++S +      F++D SV  ++L G+ +AF AG D+
Sbjct: 13  VEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDV 72

Query: 106 KEMLNQTYAANVKTG 120
             ++      N + G
Sbjct: 73  AAVVRDIEQGNWRLG 87

Length = 381

>gnl|CDD|168278 PRK05864, PRK05864, enoyl-CoA hydratase; Provisional

 Score = 55.2 bits (133), Expect = 5e-10
 Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 13/121 (10%)

Query: 32  YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
           Y ST+    +LVD       + L+ LNRP+ +N++   ++  +  A+ +   D+SV  +V
Sbjct: 4   YRSTMSL--VLVDH--PRPEIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVV 59

Query: 92  LTGNEKAFAAGADIK--------EMLNQ-TYAANVKTGLLEHWDNITKAKKPVIAAVNGY 142
           LTG  + F++GAD K        E L + TYA      L +    + +  +PVIAAVNG 
Sbjct: 60  LTGAGRGFSSGADHKSAGVVPHVEGLTRPTYALRSMELLDDVILALRRLHQPVIAAVNGP 119

Query: 143 A 143
           A
Sbjct: 120 A 120

Length = 276

>gnl|CDD|236109 PRK07827, PRK07827, enoyl-CoA hydratase; Provisional

 Score = 55.1 bits (133), Expect = 5e-10
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 5/96 (5%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKE---- 107
           V  + L+ P + NAL   LV+++   ++    D +V A+VLT     F AGAD+ E    
Sbjct: 16  VATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGG 75

Query: 108 -MLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGY 142
                  A      +      I +  KPVIAA++G+
Sbjct: 76  GGDPYDAAVARAREMTALLRAIVELPKPVIAAIDGH 111

Length = 260

>gnl|CDD|235714 PRK06142, PRK06142, enoyl-CoA hydratase; Provisional

 Score = 55.0 bits (133), Expect = 6e-10
 Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 15/112 (13%)

Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
            V    +V  V LNRP   NA+  A  SE+    +  D D  V A+VL+G+ K F+ G D
Sbjct: 9   TVELADHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGID 68

Query: 105 IKEMLNQTYAANVKTGL-----------LEHWDNIT---KAKKPVIAAVNGY 142
           +   +   +    K GL           L     I      +KPVIAAV G+
Sbjct: 69  LP-AMAGVFGQLGKDGLARPRTDLRREILRLQAAINAVADCRKPVIAAVQGW 119

Length = 272

>gnl|CDD|200143 TIGR01929, menB, naphthoate synthase (dihydroxynaphthoic acid synthetase)

 Score = 54.5 bits (131), Expect = 1e-09
 Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 6/110 (5%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-E 96
           FE+I  +K      +  + +NRP+  NA     V E+  A+    +D  +  ++LTG  +
Sbjct: 1   FEDIRYEK--STDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGD 58

Query: 97  KAFAAGAD--IKEMLNQTYAANV-KTGLLEHWDNITKAKKPVIAAVNGYA 143
           KAF +G D  ++        + V +  +L+    I    KPVIA VNGYA
Sbjct: 59  KAFCSGGDQKVRGDYGYIDDSGVHRLNVLDVQRQIRTCPKPVIAMVNGYA 108

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 259

>gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

 Score = 54.5 bits (131), Expect = 1e-09
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 15/111 (13%)

Query: 46  VGKNKNVGLVQL--NRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGA 103
           + K+ N  +  L  NRP   NAL     +E   A+   DQ+ +V+ I+L+G    F +G 
Sbjct: 10  IQKSPNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGI 69

Query: 104 DIK---EMLNQTYAANV-KTG---------LLEHWDNITKAKKPVIAAVNG 141
           D+K    +  Q+ + +  ++G         L +    I + +KPVIAA++G
Sbjct: 70  DLKTLNSISEQSSSGDRGRSGERLRRKIKFLQDAITAIEQCRKPVIAAIHG 120

Length = 275

>gnl|CDD|235632 PRK05869, PRK05869, enoyl-CoA hydratase; Validated

 Score = 53.7 bits (129), Expect = 2e-09
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 3/109 (2%)

Query: 37  KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
           +F N++V    ++  +  + L+RP + NAL   +  E+ AA  +  +   VAA++L G  
Sbjct: 3   EFVNVVVSDGSQDAGLATLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGH 61

Query: 97  KAFAAGADIKEM--LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           + F+AG D+ E+  L+   A        +  D +    KP +AA+ GYA
Sbjct: 62  EIFSAGDDMPELRTLSAQEADTAARVRQQAVDAVAAIPKPTVAAITGYA 110

Length = 222

>gnl|CDD|178509 PLN02921, PLN02921, naphthoate synthase

 Score = 53.3 bits (128), Expect = 3e-09
 Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 5/114 (4%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
           S  +F +I+ +K    + +  + +NRP+  NA     V E+  A      DSSV  I+LT
Sbjct: 60  SGKEFTDIIYEK-AVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILT 118

Query: 94  GN-EKAFAAGADIKEMLNQTYAANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
           G   KAF +G D        Y      G L   D    I +  KPVIA V GYA
Sbjct: 119 GKGTKAFCSGGDQAVRGKDGYVGPDDAGRLNVLDLQIQIRRLPKPVIAMVAGYA 172

Length = 327

>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional

 Score = 52.5 bits (126), Expect = 5e-09
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           KV   +   +V ++RP  LNAL   + +E  + ++Q + D  +  +++TG  +AF  GAD
Sbjct: 3   KVESREGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGAD 62

Query: 105 IKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
           + E     +A +++         I  + K  I+A+NG
Sbjct: 63  LSEF-APDFAIDLRETFYPIIREIRFSDKIYISAING 98

Length = 248

>gnl|CDD|131333 TIGR02280, PaaB1, phenylacetate degradation probable enoyl-CoA hydratase paaB

 Score = 52.5 bits (126), Expect = 5e-09
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)

Query: 50  KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML 109
             V  + LNRP  LN+    +  E+  A+++ ++D    A++LTG  + F AG D+ E  
Sbjct: 7   AGVARLTLNRPDKLNSFTAEMHLELREALERVERD-DARALMLTGAGRGFCAGQDLSE-R 64

Query: 110 NQTYAANVKTG-LLEHWDN-----ITKAKKPVIAAVNGYA 143
           N T       G  +E + N     +     PV+ AVNG A
Sbjct: 65  NPTPGGAPDLGRTIETFYNPLVRRLRALPLPVVCAVNGVA 104

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE). Length = 256

>gnl|CDD|181009 PRK07511, PRK07511, enoyl-CoA hydratase; Provisional

 Score = 52.3 bits (126), Expect = 7e-09
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 57  LNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML-NQTYAA 115
           L+ P + NAL   + +    A+   ++D S+ A+VLTG    F AG ++  +L N+    
Sbjct: 18  LSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRAKPP 77

Query: 116 NV---KTGLLEHW-DNITKAKKPVIAAVNGYA 143
           +V       L  W   I    KPVIAAV G A
Sbjct: 78  SVQAASIDGLHDWIRAIRAFPKPVIAAVEGAA 109

Length = 260

>gnl|CDD|235705 PRK06127, PRK06127, enoyl-CoA hydratase; Provisional

 Score = 52.0 bits (125), Expect = 9e-09
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 16/111 (14%)

Query: 41  ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAF 99
           +L +K G    +G +  N P   NA+   +   +  A+   + D ++  +VLTG  EKAF
Sbjct: 13  LLAEKTG---GLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAF 69

Query: 100 AAGADIKEMLNQ--------TYAANVKTGLLEHWDNITKAKKPVIAAVNGY 142
            +GADI +             Y   V+         +    KP IA + GY
Sbjct: 70  VSGADISQFEESRSDAEAVAAYEQAVEAAQAA----LADYAKPTIACIRGY 116

Length = 269

>gnl|CDD|183548 PRK12478, PRK12478, enoyl-CoA hydratase; Provisional

 Score = 51.9 bits (124), Expect = 9e-09
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 20/125 (16%)

Query: 35  TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG 94
           T  F+ +L    G    V  + LNRP+ LN +   +  E+ AA+   ++D  +  IVL G
Sbjct: 1   TPDFQTLLYTTAGP---VATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRG 57

Query: 95  NEKAFAAGADI-------KEMLNQ----------TYAANVKTGLLEHWDNITKAKKPVIA 137
             +AF+ G D         E +                  +TG  + +  I +A KPVIA
Sbjct: 58  AGRAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVTARETGPTQKFMAIWRASKPVIA 117

Query: 138 AVNGY 142
            V+G+
Sbjct: 118 QVHGW 122

Length = 298

>gnl|CDD|181174 PRK07938, PRK07938, enoyl-CoA hydratase; Provisional

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 55  VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT-Y 113
           V ++ P  +NAL  A    +A A+     D     +VL    + F AG DIKE+     +
Sbjct: 15  VTVDYPP-VNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQATPGF 73

Query: 114 AA--NVKTGLLEHWDNITKAKKPVIAAVNGY 142
            A  +   G    +  + +   PVIAAV+G+
Sbjct: 74  TALIDANRGCFAAFRAVYECAVPVIAAVHGF 104

Length = 249

>gnl|CDD|181254 PRK08150, PRK08150, enoyl-CoA hydratase; Provisional

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 43  VDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAG 102
           +     +  V  + LNRP   NAL D L++ + AA         V A+VL G    F AG
Sbjct: 3   LVSYELDGGVATIGLNRPAKRNALNDGLIAALRAAFA--RLPEGVRAVVLHGEGDHFCAG 60

Query: 103 ADIKEMLNQTYAANVKTGLLEH--WDNITKAKKPVIAAVNG 141
            D+ E+  +     +      H  +D I   + PVIAA++G
Sbjct: 61  LDLSELRERDAGEGMHHSRRWHRVFDKIQYGRVPVIAALHG 101

Length = 255

>gnl|CDD|132254 TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hydrolase

 Score = 50.3 bits (120), Expect = 3e-08
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NE 96
           +E+IL +K      +  + +NRP  +NA       E+  A++    D  +  IVL G  +
Sbjct: 1   YEDILYEK---RNGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGD 57

Query: 97  KAFAAGADIKEMLNQTYAANVKTGL-LEHWDN-ITKAKKPVIAAVNGYA 143
           KAF  G D +   +  Y      GL +E   + I    KPVIA V GYA
Sbjct: 58  KAFCTGGD-QSTHDGGYDGRGTIGLPMEELHSAIRDVPKPVIARVQGYA 105

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen. Length = 256

>gnl|CDD|235991 PRK07327, PRK07327, enoyl-CoA hydratase; Provisional

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD---IKEM 108
           V  + LN P +LNA    +  E+A   +  D+D  V  +++ G  KAF+AG D   ++EM
Sbjct: 22  VLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEM 81

Query: 109 LNQTYAANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
            +  +    +    E  D   N+    KP+++A++G A
Sbjct: 82  ADD-FEVRARV-WREARDLVYNVINCDKPIVSAIHGPA 117

Length = 268

>gnl|CDD|235661 PRK05981, PRK05981, enoyl-CoA hydratase; Provisional

 Score = 49.3 bits (118), Expect = 7e-08
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 12/115 (10%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQF-DQDSSVAAIVLTGNE 96
           F+ + +D  G    V ++ L+ P+ +NA+   ++  +A A+    D  + V  +VLTG  
Sbjct: 3   FKKVTLDFDG---GVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAG 59

Query: 97  KAFAAGADIKEMLNQTYAANVKTG---LLEHWDN-----ITKAKKPVIAAVNGYA 143
           + F  GA+++   +    ++        LE   +     +     P++ AVNG A
Sbjct: 60  RGFCTGANLQGRGSGGRESDSGGDAGAALETAYHPFLRRLRNLPCPIVTAVNGPA 114

Length = 266

>gnl|CDD|180958 PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated

 Score = 49.1 bits (118), Expect = 9e-08
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 7/111 (6%)

Query: 37  KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-N 95
           ++E+IL         +  + +NRP+  NA     V E+  A      D ++  I+LTG  
Sbjct: 11  EYEDILYKSADG---IAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAG 67

Query: 96  EKAFAAGADIKEMLNQTYAANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
           +KAF +G D K      Y  +     L   D    I    KPVIA V GYA
Sbjct: 68  DKAFCSGGDQKVRGYGGYVDDDGVPRLNVLDLQRLIRTCPKPVIAMVAGYA 118

Length = 273

>gnl|CDD|236220 PRK08290, PRK08290, enoyl-CoA hydratase; Provisional

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 33/131 (25%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E +  +  G+   +  + LNRP++ NA    ++ E+ AA ++ + D +V  IVL G  K
Sbjct: 3   YEYVRYEVAGR---IARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGK 59

Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEH----WDNITKA---------------------- 131
            F+AG D+      T   +   G  +H    WD  TK                       
Sbjct: 60  HFSAGHDLGS---GTPGRDRDPGPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRD 116

Query: 132 -KKPVIAAVNG 141
             KP IA V G
Sbjct: 117 LPKPTIAQVQG 127

Length = 288

>gnl|CDD|223524 COG0447, MenB, Dihydroxynaphthoic acid synthase [Coenzyme metabolism]

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
                +E+I  +K      +  + +NRP+  NA     V E+  A      D +V  I+L
Sbjct: 12  DGFEGYEDITYEK--SVDGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILL 69

Query: 93  TGN---EKAFAAGADIK-EMLNQTYAANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
           TGN   +KAF +G D K    +  Y  +     L   D    I    KPVIA V GYA
Sbjct: 70  TGNGDGDKAFCSGGDQKVRGDSGGYVDDDGIPRLNVLDLQRLIRTMPKPVIAMVAGYA 127

Length = 282

>gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha subunit, mitochondrial

 Score = 47.5 bits (113), Expect = 4e-07
 Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 7/102 (6%)

Query: 46  VGKNKNVGLVQLNRPKS-LNALCDALVSEVAAAVQQFDQDSSV-AAIVLTGNEKAFAAGA 103
                +V +V+++ P S +N L   L +E    + +   + ++ +A++++G   +F AGA
Sbjct: 17  YEVKGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGA 76

Query: 104 DIKEMLNQTYAANVKTGL----LEHWDNITKAKKPVIAAVNG 141
           DI +M+     A   T L     E ++ I K++KP++AA++G
Sbjct: 77  DI-QMIAACKTAQEVTQLSQEGQEMFERIEKSQKPIVAAISG 117

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human , pig , and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16). Length = 737

>gnl|CDD|183293 PRK11730, fadB, multifunctional fatty acid oxidation complex subunit alpha; Reviewed

 Score = 46.4 bits (111), Expect = 9e-07
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 17/103 (16%)

Query: 53  GLVQL--NRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
           G+ +L  + P S+N L  A ++ +  A+   +  S +  ++LT  + AF  GADI E L 
Sbjct: 16  GIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFL- 74

Query: 111 QTYAANVKTGLLEHWDNITKAKK----------PVIAAVNGYA 143
             +AA  +   L  W  +  A            P +AA+NGYA
Sbjct: 75  SLFAAPEEE--LSQW--LHFANSIFNRLEDLPVPTVAAINGYA 113

Length = 715

>gnl|CDD|236373 PRK09076, PRK09076, enoyl-CoA hydratase; Provisional

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)

Query: 52  VGLVQLNRP-------KSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGA 103
           V ++ LN P        SL AL           V + + D  V A+V+TG+ EK F+AGA
Sbjct: 13  VAILTLNNPPANTWTADSLQAL--------KQLVLELNADKDVYALVITGDGEKFFSAGA 64

Query: 104 DIKEML--NQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           D+      ++  A  +     E ++ ++  +   IAA+NGYA
Sbjct: 65  DLNLFADGDKAVAREMARRFGEAFEALSAFRGVSIAAINGYA 106

Length = 258

>gnl|CDD|181329 PRK08258, PRK08258, enoyl-CoA hydratase; Provisional

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 10/100 (10%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ 111
           V  + LNRP+  N L     +E+    ++      V A+VLTG    F +G D+ E++  
Sbjct: 27  VATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGP 86

Query: 112 TYAANVKTGLLEHWDNIT----KA----KKPVIAAVNGYA 143
               ++   LL  +  +T    KA     +P+IAAV+G  
Sbjct: 87  LTKMDMP-ELLA-FTRMTGDLVKAMRACPQPIIAAVDGVC 124

Length = 277

>gnl|CDD|131490 TIGR02437, FadB, fatty oxidation complex, alpha subunit FadB

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
            +  ++ + P S+N    A ++ +  A+      SS+  ++LT  + AF  GADI E L 
Sbjct: 16  GIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLG 75

Query: 111 --QTYAANVKTGLLEH---WDNITKAKKPVIAAVNGYA 143
                 A +   LL     ++ +     P +AA+NG A
Sbjct: 76  LFALPDAELIQWLLFANSIFNKLEDLPVPTVAAINGIA 113

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399 [Fatty acid and phospholipid metabolism, Degradation]. Length = 714

>gnl|CDD|168168 PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated

 Score = 44.0 bits (104), Expect = 5e-06
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 57  LNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT---Y 113
           L+R    NA    ++ E+  A+ Q   D+S+  ++L G  + F+AGAD+  M       Y
Sbjct: 21  LSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSADLDY 80

Query: 114 AANVKTG--LLEHWDNITKAKKPVIAAVNGYA 143
             N+     L E   N+ + K P +A V G A
Sbjct: 81  NTNLDDARELAELMYNLYRLKIPTLAVVQGAA 112

Length = 265

>gnl|CDD|180910 PRK07260, PRK07260, enoyl-CoA hydratase; Provisional

 Score = 43.2 bits (102), Expect = 9e-06
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 9/110 (8%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           FE+I+ +      ++  + LNRP+  N     +  E+  A++  ++D SV  +++  N K
Sbjct: 1   FEHIIYEVED---DLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGK 57

Query: 98  AFAAGADIKEMLNQTYAANVK--TGLLEHWDNIT----KAKKPVIAAVNG 141
            F+ G D+ EM       +V+    + E  + I+    +  KPVI  V+G
Sbjct: 58  VFSVGGDLVEMKRAVDEDDVQSLVKIAELVNEISFAIKQLPKPVIMCVDG 107

Length = 255

>gnl|CDD|178443 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 20/67 (29%), Positives = 42/67 (62%), Gaps = 3/67 (4%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
           + +LV+  G+ K+   + LNRP SLNAL   +V+ +    + ++++  +  +++ G+ +A
Sbjct: 42  DQVLVE--GRAKSRAAI-LNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRA 98

Query: 99  FAAGADI 105
           F +GAD+
Sbjct: 99  FCSGADV 105

Length = 407

>gnl|CDD|236864 PRK11154, fadJ, multifunctional fatty acid oxidation complex subunit alpha; Reviewed

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 51  NVGLVQLNRP-KSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT-GNEKAFAAGADIKEM 108
           N+ ++ ++ P + +N L      +V A ++Q  +D  +  +V   G    F AGADI  M
Sbjct: 15  NIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADIN-M 73

Query: 109 LNQTYAANVKTGLLEH----WDNITKAKKPVIAAVNG 141
           L     A     L       +  I     PV+AA++G
Sbjct: 74  LAACKTAQEAEALARQGQQLFAEIEALPIPVVAAIHG 110

Length = 708

>gnl|CDD|235938 PRK07112, PRK07112, polyketide biosynthesis enoyl-CoA hydratase; Validated

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           +V +  +V  +QL+RP++ N + D L++E    + + +  +++  +VL G  + F  GAD
Sbjct: 7   RVRQQGDVCFLQLHRPEAQNTINDRLIAECMDVLDRCEHAATI--VVLEGLPEVFCFGAD 64

Query: 105 IKEMLNQTYAANVKTG----LLEHWDNITKAKKPVIAAVNGYA 143
              +  +  A          L + W  +       IA V G  
Sbjct: 65  FSAIAEKPDAGRADLIDAEPLYDLWHRLATGPYVTIAHVRGKV 107

Length = 255

>gnl|CDD|180625 PRK06563, PRK06563, enoyl-CoA hydratase; Provisional

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
           +V L+ L+RP   NA   A++ ++A A+ +++ D  +   VL  + + F AG D+ + + 
Sbjct: 8   HVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLAD-VA 66

Query: 111 QTYAANVKT---GLLEHWDNITKAK--KPVIAAVNGY 142
              AA       G ++ W      +  KP++ AV GY
Sbjct: 67  PKLAAGGFPFPEGGIDPWG-TVGRRLSKPLVVAVQGY 102

Length = 255

>gnl|CDD|132244 TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

 Score = 41.0 bits (96), Expect = 6e-05
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 55  VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEMLNQTY 113
           + L+ PK  N+    +V  +  A ++   D  V A+V T   +KAF  G + KE   + Y
Sbjct: 41  IILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYA-EYY 99

Query: 114 AANVKTG------LLEHWDNITKAKKPVIAAVNG 141
           A N +          +    I    KPVI  VNG
Sbjct: 100 AGNPQEYRQYMRLFNDMVSAILGCDKPVICRVNG 133

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 360

>gnl|CDD|177817 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 16/49 (32%), Positives = 30/49 (61%)

Query: 57  LNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI 105
           LNRP +LNAL   +   +    + +++D ++  +++ G+ +AF AG DI
Sbjct: 52  LNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDI 100

Length = 401

>gnl|CDD|235744 PRK06213, PRK06213, enoyl-CoA hydratase; Provisional

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 18/101 (17%)

Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
            V  + L+  K +NAL  A++  + AA+ Q + D   A +V+TG    F+ G D+K M +
Sbjct: 12  GVATITLDDGK-VNALSPAMIDALNAALDQAEDDR--AVVVITGQPGIFSGGFDLKVMTS 68

Query: 111 QTYAAN--VKTG------LLEHWDNITKAKKPVIAAVNGYA 143
              AA   +  G      LL H        KPVI A  G+A
Sbjct: 69  GAQAAIALLTAGSTLARRLLSH-------PKPVIVACTGHA 102

Length = 229

>gnl|CDD|235936 PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN- 110
           +  V +    + NA  D L  ++  A     QD     ++LTG    FA G   + +L+ 
Sbjct: 15  IAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSL 74

Query: 111 -QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
                   +  L     N      PVIAA+ G+A
Sbjct: 75  QTGKGTFTEANLYSLALNC---PIPVIAAMQGHA 105

Length = 249

>gnl|CDD|181386 PRK08321, PRK08321, naphthoate synthase; Validated

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 22/116 (18%)

Query: 50  KNVGLVQL--NRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN---EK----AFA 100
            + G V++  +RP+  NA     V E+  A+        V  ++LTGN    K    AF 
Sbjct: 31  VDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFC 90

Query: 101 AGAD--IKEMLNQTYAANVKTG-----------LLEHWDNITKAKKPVIAAVNGYA 143
           +G D  I+      YA   +             +LE    I    K VIA V G+A
Sbjct: 91  SGGDQRIRGRDGYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWA 146

Length = 302

>gnl|CDD|178210 PLN02600, PLN02600, enoyl-CoA hydratase

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 55  VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKE--MLNQ 111
           ++L+RP++ NA+   ++  + +A ++   D+S   ++L  +    F AGAD+KE   ++ 
Sbjct: 8   LRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKMSP 67

Query: 112 TYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +        L   + ++     P IA V G A
Sbjct: 68  SEVQKFVNSLRSTFSSLEALSIPTIAVVEGAA 99

Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	143
PRK05862	257	enoyl-CoA hydratase; Provisional	99.93
PRK09674	255	enoyl-CoA hydratase-isomerase; Provisional	99.92
PRK06190	258	enoyl-CoA hydratase; Provisional	99.92
PRK05995	262	enoyl-CoA hydratase; Provisional	99.92
PRK08138	261	enoyl-CoA hydratase; Provisional	99.92
PRK05981	266	enoyl-CoA hydratase; Provisional	99.92
PRK06142	272	enoyl-CoA hydratase; Provisional	99.92
PRK05674	265	gamma-carboxygeranoyl-CoA hydratase; Validated	99.92
PRK09120	275	p-hydroxycinnamoyl CoA hydratase/lyase; Validated	99.92
PRK05809	260	3-hydroxybutyryl-CoA dehydratase; Validated	99.92
TIGR03210	256	badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb	99.92
PRK05870	249	enoyl-CoA hydratase; Provisional	99.92
PRK08140	262	enoyl-CoA hydratase; Provisional	99.91
COG1024	257	CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi	99.91
PRK07468	262	enoyl-CoA hydratase; Provisional	99.91
PRK06495	257	enoyl-CoA hydratase; Provisional	99.91
PLN02664	275	enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA	99.91
PRK06072	248	enoyl-CoA hydratase; Provisional	99.91
PRK06023	251	enoyl-CoA hydratase; Provisional	99.91
PRK07327	268	enoyl-CoA hydratase; Provisional	99.91
PRK08272	302	enoyl-CoA hydratase; Provisional	99.91
PRK05864	276	enoyl-CoA hydratase; Provisional	99.91
PRK12478	298	enoyl-CoA hydratase; Provisional	99.91
PRK08290	288	enoyl-CoA hydratase; Provisional	99.91
PRK08260	296	enoyl-CoA hydratase; Provisional	99.91
PRK06143	256	enoyl-CoA hydratase; Provisional	99.91
PRK06144	262	enoyl-CoA hydratase; Provisional	99.91
PRK07260	255	enoyl-CoA hydratase; Provisional	99.91
PRK08139	266	enoyl-CoA hydratase; Validated	99.91
PRK05980	260	enoyl-CoA hydratase; Provisional	99.91
PRK08150	255	enoyl-CoA hydratase; Provisional	99.91
PRK07110	249	polyketide biosynthesis enoyl-CoA hydratase; Valid	99.91
PRK06494	259	enoyl-CoA hydratase; Provisional	99.91
PRK07509	262	enoyl-CoA hydratase; Provisional	99.91
PRK05869	222	enoyl-CoA hydratase; Validated	99.91
PRK07659	260	enoyl-CoA hydratase; Provisional	99.91
KOG1681|consensus	292		99.91
TIGR01929	259	menB naphthoate synthase (dihydroxynaphthoic acid	99.91
PRK07827	260	enoyl-CoA hydratase; Provisional	99.91
PRK07799	263	enoyl-CoA hydratase; Provisional	99.91
PRK08258	277	enoyl-CoA hydratase; Provisional	99.9
PRK09245	266	enoyl-CoA hydratase; Provisional	99.9
PRK06127	269	enoyl-CoA hydratase; Provisional	99.9
PRK06688	259	enoyl-CoA hydratase; Provisional	99.9
TIGR02280	256	PaaB1 phenylacetate degradation probable enoyl-CoA	99.9
PRK09076	258	enoyl-CoA hydratase; Provisional	99.9
PRK07657	260	enoyl-CoA hydratase; Provisional	99.9
PRK11423	261	methylmalonyl-CoA decarboxylase; Provisional	99.9
PRK06210	272	enoyl-CoA hydratase; Provisional	99.9
PRK08259	254	enoyl-CoA hydratase; Provisional	99.9
PRK07511	260	enoyl-CoA hydratase; Provisional	99.9
PRK07658	257	enoyl-CoA hydratase; Provisional	99.9
PRK06563	255	enoyl-CoA hydratase; Provisional	99.9
PRK07396	273	dihydroxynaphthoic acid synthetase; Validated	99.9
PLN02600	251	enoyl-CoA hydratase	99.9
PLN02888	265	enoyl-CoA hydratase	99.9
PRK08252	254	enoyl-CoA hydratase; Provisional	99.9
PRK07112	255	polyketide biosynthesis enoyl-CoA hydratase; Valid	99.9
PLN02851	407	3-hydroxyisobutyryl-CoA hydrolase-like protein	99.9
TIGR03189	251	dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy	99.9
PLN02874	379	3-hydroxyisobutyryl-CoA hydrolase-like protein	99.89
KOG1680|consensus	290		99.89
PRK07854	243	enoyl-CoA hydratase; Provisional	99.89
PLN02157	401	3-hydroxyisobutyryl-CoA hydrolase-like protein	99.89
PLN02921	327	naphthoate synthase	99.89
PRK07938	249	enoyl-CoA hydratase; Provisional	99.89
PRK05617	342	3-hydroxyisobutyryl-CoA hydrolase; Provisional	99.89
PRK03580	261	carnitinyl-CoA dehydratase; Provisional	99.89
PF00378	245	ECH: Enoyl-CoA hydratase/isomerase family; InterPr	99.88
PLN02988	381	3-hydroxyisobutyryl-CoA hydrolase	99.88
PRK08788	287	enoyl-CoA hydratase; Validated	99.88
PRK08321	302	naphthoate synthase; Validated	99.88
PLN03214	278	probable enoyl-CoA hydratase/isomerase; Provisiona	99.87
PLN02267	239	enoyl-CoA hydratase/isomerase family protein	99.87
PRK06213	229	enoyl-CoA hydratase; Provisional	99.87
cd06558	195	crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy	99.86
PRK11730	715	fadB multifunctional fatty acid oxidation complex	99.85
TIGR03200	360	dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy	99.85
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	99.83
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	99.83
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	99.83
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	99.83
KOG1679|consensus	291		99.82
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	99.82
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	99.82
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	99.81
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	99.81
KOG0016|consensus	266		99.78
COG0447	282	MenB Dihydroxynaphthoic acid synthase [Coenzyme me	99.75
KOG1682|consensus	287		99.71
KOG1684|consensus	401		99.66
cd07019	211	S49_SppA_1 Signal peptide peptidase A (SppA), a se	98.83
cd07014	177	S49_SppA Signal peptide peptidase A. Signal peptid	98.67
cd07023	208	S49_Sppa_N_C Signal peptide peptidase A (SppA), a	98.44
cd07022	214	S49_Sppa_36K_type Signal peptide peptidase A (SppA	98.42
cd00394	161	Clp_protease_like Caseinolytic protease (ClpP) is	97.89
cd07018	222	S49_SppA_67K_type Signal peptide peptidase A (SppA	97.88
TIGR00706	207	SppA_dom signal peptide peptidase SppA, 36K type.	97.86
KOG1683|consensus	380		97.36
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	97.18
cd07020	187	Clp_protease_NfeD_1 Nodulation formation efficienc	96.96
cd07021	178	Clp_protease_NfeD_like Nodulation formation effici	95.72
cd07016	160	S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-	94.7
PRK10949	618	protease 4; Provisional	93.31
PF02601	319	Exonuc_VII_L: Exonuclease VII, large subunit; Inte	93.24
TIGR00237	432	xseA exodeoxyribonuclease VII, large subunit. This	92.6
COG1570	440	XseA Exonuclease VII, large subunit [DNA replicati	91.3
PRK00286	438	xseA exodeoxyribonuclease VII large subunit; Revie	90.32
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	86.54
cd07013	162	S14_ClpP Caseinolytic protease (ClpP) is an ATP-de	84.76
PRK10949	618	protease 4; Provisional	82.86
COG0074	293	SucD Succinyl-CoA synthetase, alpha subunit [Energ	82.35

>PRK05862 enoyl-CoA hydratase; Provisional

Probab=99.93  E-value=4e-25  Score=169.50  Aligned_cols=104  Identities=54%  Similarity=0.886  Sum_probs=89.3

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN  116 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~  116 (143)
                      .++.+.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++........
T Consensus         2 ~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~   78 (257)
T PRK05862          2 AYETILVETRG---RVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADLSFMDV   78 (257)
T ss_pred             CCceEEEEeeC---CEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhccchhHH
Confidence            45678888876   899999999999999999999999999999999999999999999999999999999765332222


Q ss_pred             HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 ~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +...+...+.+|..+||||||+|||+|
T Consensus        79 ~~~~~~~~~~~l~~~~kpvIaav~G~a  105 (257)
T PRK05862         79 YKGDYITNWEKVARIRKPVIAAVAGYA  105 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEccEE
Confidence            223345567889999999999999986

>PRK09674 enoyl-CoA hydratase-isomerase; Provisional

Probab=99.92  E-value=8.5e-25  Score=167.59  Aligned_cols=102  Identities=39%  Similarity=0.633  Sum_probs=86.9

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHH
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVK  118 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~  118 (143)
                      ..+.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..........
T Consensus         2 ~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~   78 (255)
T PRK09674          2 SELLVSRQQ---RVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEKDLAATLN   78 (255)
T ss_pred             ceEEEEeEC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhccchhhhHH
Confidence            457788876   99999999999999999999999999999999999999999999999999999999876432221122


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         119 TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       119 ~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....++.++..+||||||+|||+|
T Consensus        79 ~~~~~~~~~l~~~~kPvIAav~G~a  103 (255)
T PRK09674         79 DPRPQLWQRLQAFNKPLIAAVNGYA  103 (255)
T ss_pred             HHHHHHHHHHHhCCCCEEEEECCEe
Confidence            3345567889999999999999986

>PRK06190 enoyl-CoA hydratase; Provisional

Probab=99.92  E-value=1e-24  Score=167.52  Aligned_cols=105  Identities=36%  Similarity=0.466  Sum_probs=90.0

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      |.++.+.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.......
T Consensus         1 ~~~~~v~~~~~~---~va~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~   77 (258)
T PRK06190          1 MTEPILLVETHD---RVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDGSAY   77 (258)
T ss_pred             CCCceEEEEeeC---CEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchh
Confidence            456788999887   99999999999999999999999999999999999999999999999999999999986432211


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....+..++.++..+|||+||+|||+|
T Consensus        78 ~~~~~~~~~~~~i~~~~kPvIAaV~G~a  105 (258)
T PRK06190         78 GAQDALPNPSPAWPAMRKPVIGAINGAA  105 (258)
T ss_pred             hHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence            1123345677899999999999999986

>PRK05995 enoyl-CoA hydratase; Provisional

Probab=99.92  E-value=1.4e-24  Score=166.91  Aligned_cols=105  Identities=38%  Similarity=0.558  Sum_probs=89.4

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh---
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT---  112 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~---  112 (143)
                      |.|+.+.++.++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....   
T Consensus         1 ~~~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~   77 (262)
T PRK05995          1 MMYETLEIEQRG---QVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYS   77 (262)
T ss_pred             CCCceEEEEeeC---CEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccC
Confidence            457789999887   99999999999999999999999999999999999999999999999999999999875321   


Q ss_pred             hhhhH--HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 YAANV--KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~~~~~--~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....  ...+.+++.++..+|||+||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  110 (262)
T PRK05995         78 DDENRADARRLADMLRAIYRCPKPVIARVHGDA  110 (262)
T ss_pred             chhhhhHHHHHHHHHHHHHcCCCCEEEEECCEE
Confidence            11111  13445677899999999999999986

>PRK08138 enoyl-CoA hydratase; Provisional

Probab=99.92  E-value=2.1e-24  Score=165.88  Aligned_cols=106  Identities=40%  Similarity=0.590  Sum_probs=88.9

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      ...+.+.++..+  ++|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++.......
T Consensus         4 ~~~~~~~~~~~~--~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~   81 (261)
T PRK08138          4 TATDVVLLERPA--DGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATAGAIE   81 (261)
T ss_pred             CCCCCEEEEEcc--CCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhccchhH
Confidence            345678888732  389999999999999999999999999999999999999999999999999999999876432222


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .+...+.+++..+..+|||+||+|||+|
T Consensus        82 ~~~~~~~~~~~~l~~~~kPvIaav~G~a  109 (261)
T PRK08138         82 MYLRHTERYWEAIAQCPKPVIAAVNGYA  109 (261)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEccEE
Confidence            2223445677889999999999999986

>PRK05981 enoyl-CoA hydratase; Provisional

Probab=99.92  E-value=2.4e-24  Score=165.89  Aligned_cols=105  Identities=25%  Similarity=0.449  Sum_probs=88.7

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCC-CeeEEEEEcCCCCccCCCCcchhhhhhh-
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDS-SVAAIVLTGNEKAFAAGADIKEMLNQTY-  113 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~-~vr~vVltg~g~~FsaG~Dl~~~~~~~~-  113 (143)
                      |.|+.+.+++++   +|++|+||||+++|+++.+|+++|.++++.++.|+ ++|+|||+|.|++||+|+|++++..... 
T Consensus         1 ~~~~~v~~~~~~---~i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~   77 (266)
T PRK05981          1 MQFKKVTLDFDG---GVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRE   77 (266)
T ss_pred             CCcceEEEEeEC---CEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhccccc
Confidence            468889999887   99999999999999999999999999999999876 4999999999999999999998754211 


Q ss_pred             -----h--hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 -----A--ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 -----~--~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                           .  ......+..++.+|..+||||||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a  114 (266)
T PRK05981         78 SDSGGDAGAALETAYHPFLRRLRNLPCPIVTAVNGPA  114 (266)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence                 0  11113345677899999999999999987

>PRK06142 enoyl-CoA hydratase; Provisional

Probab=99.92  E-value=2.8e-24  Score=166.05  Aligned_cols=104  Identities=33%  Similarity=0.486  Sum_probs=88.0

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh----
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT----  112 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~----  112 (143)
                      .++.+.+++++   +|++|+||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++....    
T Consensus         4 ~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~   80 (272)
T PRK06142          4 TYESFTVELAD---HVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLG   80 (272)
T ss_pred             CcceEEEEecC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhccccc
Confidence            35678999876   99999999999999999999999999999999999999999999999999999999875411    


Q ss_pred             -----h-hhhH---HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 -----Y-AANV---KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 -----~-~~~~---~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                           . ...+   ...+.+++.++..+||||||+|||+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~a  120 (272)
T PRK06142         81 KDGLARPRTDLRREILRLQAAINAVADCRKPVIAAVQGWC  120 (272)
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcc
Confidence                 0 0111   12345667889999999999999997

>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated

Probab=99.92  E-value=2.1e-24  Score=166.27  Aligned_cols=106  Identities=27%  Similarity=0.369  Sum_probs=88.8

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh-
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA-  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~-  114 (143)
                      ++|+++.+++++  ++|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++...... 
T Consensus         2 ~~~~~l~~~~~~--~~v~~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~   79 (265)
T PRK05674          2 SDFQTIELIRDP--RGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSADLD   79 (265)
T ss_pred             CCcceEEEEEcC--CCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhccccc
Confidence            358889999852  28999999999999999999999999999999999999999999999999999999987532110 


Q ss_pred             --hh--HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 --AN--VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 --~~--~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                        ..  ....+.+++.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~~l~~~~kPvIaaV~G~a  112 (265)
T PRK05674         80 YNTNLDDARELAELMYNLYRLKIPTLAVVQGAA  112 (265)
T ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEEcCEE
Confidence              11  112345677889999999999999986

>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated

Probab=99.92  E-value=2.2e-24  Score=166.97  Aligned_cols=104  Identities=29%  Similarity=0.535  Sum_probs=88.4

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh--h
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY--A  114 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~--~  114 (143)
                      .|+++.+++++   +|++|+||||+++|+++.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++.....  .
T Consensus         6 ~~~~i~~~~~~---~va~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~   82 (275)
T PRK09120          6 RWDTVKVEVED---GIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQP   82 (275)
T ss_pred             ccccEEEEEEC---CEEEEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccch
Confidence            47889999887   999999999999999999999999999999999999999999999999999999998743211  1


Q ss_pred             h----hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A----NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~----~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .    .....+..++.+|..+||||||+|||+|
T Consensus        83 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  115 (275)
T PRK09120         83 EILQERIRREAYGWWRRLRWYQKPTIAMVNGWC  115 (275)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEE
Confidence            1    1112344567889999999999999986

>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated

Probab=99.92  E-value=2.7e-24  Score=165.14  Aligned_cols=105  Identities=36%  Similarity=0.605  Sum_probs=90.0

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~  114 (143)
                      |+|+.+.+++++   +|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.| ++||+|+|++++......
T Consensus         1 ~~~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~~~~   77 (260)
T PRK05809          1 MELKNVILEKEG---HIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDLNEE   77 (260)
T ss_pred             CCcceEEEEEeC---CEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhccChH
Confidence            467889999887   8999999999999999999999999999999999999999999988 999999999987643221


Q ss_pred             h--hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A--NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~--~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .  .+......++.++..+||||||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  108 (260)
T PRK05809         78 EGRKFGLLGNKVFRKLENLDKPVIAAINGFA  108 (260)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCEEEEEcCee
Confidence            1  1223345677899999999999999987

>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase

Probab=99.92  E-value=2.2e-24  Score=165.38  Aligned_cols=103  Identities=31%  Similarity=0.473  Sum_probs=87.0

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhh-h
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYA-A  115 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~-~  115 (143)
                      |+++.+++++   +|++||||||++.|+++.+|+++|.+++++++.|+++|+|||+|.| ++||+|+|++++...... .
T Consensus         1 ~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~   77 (256)
T TIGR03210         1 YEDILYEKRN---GIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGGYDGRG   77 (256)
T ss_pred             CCceEEEeeC---CEEEEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhccccchh
Confidence            4678888876   9999999999999999999999999999999999999999999987 799999999987432111 1


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....+..++.++..+|||+||+|||+|
T Consensus        78 ~~~~~~~~~~~~l~~~~kPvIaav~G~a  105 (256)
T TIGR03210        78 TIGLPMEELHSAIRDVPKPVIARVQGYA  105 (256)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence            1112345677899999999999999987

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.

>PRK05870 enoyl-CoA hydratase; Provisional

Probab=99.92  E-value=3e-24  Score=163.99  Aligned_cols=102  Identities=31%  Similarity=0.450  Sum_probs=86.8

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh--hh
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA--AN  116 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~--~~  116 (143)
                      +.+.+++++   +|++|+||||+++|++|.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++......  ..
T Consensus         3 ~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~   79 (249)
T PRK05870          3 DPVLLDVDD---GVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPGRPAED   79 (249)
T ss_pred             ccEEEEccC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhcccccchHH
Confidence            457788776   9999999999999999999999999999999999999999999999999999999998643211  11


Q ss_pred             HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 ~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ....+.+.+..+..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~l~~~~kPvIaav~G~a  106 (249)
T PRK05870         80 GLRRIYDGFLAVASCPLPTIAAVNGAA  106 (249)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence            123445667789999999999999986

>PRK08140 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=4.4e-24  Score=164.12  Aligned_cols=104  Identities=31%  Similarity=0.438  Sum_probs=86.9

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh--
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY--  113 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~--  113 (143)
                      |.|+.+.++.++   +|++|+||||+++|+++.+|+++|.+++++++ |+++|+|||+|.|++||+|+|++++.....  
T Consensus         1 ~~~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~   76 (262)
T PRK08140          1 MMYETILLAIEA---GVATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGA   76 (262)
T ss_pred             CCCceEEEEeEC---CEEEEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhcccccc
Confidence            346778899887   99999999999999999999999999999999 999999999999999999999998753210  


Q ss_pred             -hh---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 -AA---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 -~~---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       ..   .....+..++.++..+|||+||+|||+|
T Consensus        77 ~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  110 (262)
T PRK08140         77 MPDLGESIETFYNPLVRRLRALPLPVIAAVNGVA  110 (262)
T ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence             11   1112233466789999999999999987

>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

Probab=99.91  E-value=4.3e-24  Score=163.76  Aligned_cols=104  Identities=42%  Similarity=0.651  Sum_probs=89.7

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhh-h-h-h
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN-Q-T-Y  113 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~-~-~-~  113 (143)
                      .+..+.++.++   +|++|+||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+||+++.. . . .
T Consensus         3 ~~~~~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~~~~~~~   79 (257)
T COG1024           3 TYETILVERED---GIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLSPEDGNA   79 (257)
T ss_pred             CCCeeEEEeeC---CEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhcccchhH
Confidence            45678888876   799999999999999999999999999999999999999999999999999999999874 1 1 1


Q ss_pred             hhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ........+.++.++.++||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  109 (257)
T COG1024          80 AENLMQPGQDLLRALADLPKPVIAAVNGYA  109 (257)
T ss_pred             HHHHHhHHHHHHHHHHhCCCCEEEEEcceE
Confidence            112224455678999999999999999986

>PRK07468 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=5.6e-24  Score=163.64  Aligned_cols=105  Identities=31%  Similarity=0.475  Sum_probs=87.4

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh---h
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT---Y  113 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~---~  113 (143)
                      .|+.+.+++++  ++|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++....   .
T Consensus         2 ~~~~~~~~~~~--~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~   79 (262)
T PRK07468          2 MFETIRIAVDA--RGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTADR   79 (262)
T ss_pred             CcceEEEEEcC--CcEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhcccch
Confidence            35678888752  389999999999999999999999999999999999999999999999999999999875321   1


Q ss_pred             hhh--HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AAN--VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~~--~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...  ....+..++.+|..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  111 (262)
T PRK07468         80 ATRIEEARRLAMMLKALNDLPKPLIGRIQGQA  111 (262)
T ss_pred             hhHHHHHHHHHHHHHHHHcCCCCEEEEECCEE
Confidence            111  113345667899999999999999986

>PRK06495 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=5.8e-24  Score=163.15  Aligned_cols=104  Identities=33%  Similarity=0.465  Sum_probs=87.8

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh--h
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT--Y  113 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~--~  113 (143)
                      +.|+.+.+++++   +|++|+||||+ .|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++....  .
T Consensus         1 ~~~~~i~~~~~~---~v~~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~   76 (257)
T PRK06495          1 MMMSQLKLEVSD---HVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVIKGP   76 (257)
T ss_pred             CCcceEEEEeeC---CEEEEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhccCCc
Confidence            357788999876   89999999998 69999999999999999999999999999999999999999999875421  1


Q ss_pred             hh--hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AA--NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~--~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..  .....+.+++.++..+|||+||+|||+|
T Consensus        77 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  108 (257)
T PRK06495         77 GDLRAHNRRTRECFHAIRECAKPVIAAVNGPA  108 (257)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            11  1113345667889999999999999987

>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

Probab=99.91  E-value=7.5e-24  Score=163.98  Aligned_cols=106  Identities=28%  Similarity=0.446  Sum_probs=84.8

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh----
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY----  113 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~----  113 (143)
                      |..+.+-....+++|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.....    
T Consensus         4 ~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~   83 (275)
T PLN02664          4 YKTLEIIQKSPNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSS   83 (275)
T ss_pred             ccceEEEEecCCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhccccccc
Confidence            4444433322345999999999999999999999999999999999999999999999999999999998754210    


Q ss_pred             ------hhhH---HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 ------AANV---KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ------~~~~---~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                            ....   ...+.+++.+|..+||||||+|||+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  122 (275)
T PLN02664         84 GDRGRSGERLRRKIKFLQDAITAIEQCRKPVIAAIHGAC  122 (275)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence                  0111   12344567889999999999999997

>PRK06072 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=6.1e-24  Score=162.30  Aligned_cols=99  Identities=26%  Similarity=0.437  Sum_probs=85.0

Q ss_pred             EEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhH
Q psy9280          41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTG  120 (143)
Q Consensus        41 v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~  120 (143)
                      +.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++..... ......
T Consensus         2 i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~-~~~~~~   77 (248)
T PRK06072          2 IKVESRE---GYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPDFA-IDLRET   77 (248)
T ss_pred             eEEEEEC---CEEEEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhhhH-HHHHHH
Confidence            4567766   999999999999999999999999999999999999999999999999999999998754221 112234


Q ss_pred             HHHHHHHHhcCCCcEEEEEecCC
Q psy9280         121 LLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       121 ~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +..++..+..+||||||+|||+|
T Consensus        78 ~~~~~~~l~~~~kPvIaav~G~a  100 (248)
T PRK06072         78 FYPIIREIRFSDKIYISAINGVT  100 (248)
T ss_pred             HHHHHHHHHhCCCCEEEEECCee
Confidence            56677889999999999999987

>PRK06023 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=4.6e-24  Score=163.17  Aligned_cols=105  Identities=30%  Similarity=0.576  Sum_probs=87.4

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh-hhhH
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY-AANV  117 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~-~~~~  117 (143)
                      +.+.+++++..++|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++..... ....
T Consensus         3 ~~i~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~   82 (251)
T PRK06023          3 DHILVERPGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAMGGTSF   82 (251)
T ss_pred             ceEEEEeecCcCcEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhccccchhh
Confidence            357888765223599999999999999999999999999999999999999999999999999999998754221 1112


Q ss_pred             HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         118 KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       118 ~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...+.+++.+|..+||||||+|||+|
T Consensus        83 ~~~~~~~~~~l~~~~kPvIAav~G~a  108 (251)
T PRK06023         83 GSEILDFLIALAEAEKPIVSGVDGLA  108 (251)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEeCCce
Confidence            23455677899999999999999986

>PRK07327 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=6.2e-24  Score=163.88  Aligned_cols=106  Identities=26%  Similarity=0.375  Sum_probs=88.3

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh-
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA-  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~-  114 (143)
                      ..|+.+.+++++  ++|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++...... 
T Consensus         8 ~~~~~i~~~~~~--~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~   85 (268)
T PRK07327          8 ADYPALRFDRPP--PGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMADDF   85 (268)
T ss_pred             CCCCeEEEEecC--CCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhccCcH
Confidence            447789998742  28999999999999999999999999999999999999999999999999999999987542111 


Q ss_pred             ---hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ---ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ---~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                         ......+..++..+..+||||||+|||+|
T Consensus        86 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  117 (268)
T PRK07327         86 EVRARVWREARDLVYNVINCDKPIVSAIHGPA  117 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCEEEEEcCee
Confidence               11113345667889999999999999987

>PRK08272 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=4e-24  Score=167.47  Aligned_cols=105  Identities=27%  Similarity=0.452  Sum_probs=88.8

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh-
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA-  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~-  114 (143)
                      ++|+.+.++.++   +|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++...... 
T Consensus         7 ~~~~~v~~e~~~---~V~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~   83 (302)
T PRK08272          7 DNLKTMTYEVTG---RIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSG   83 (302)
T ss_pred             CCCCeEEEEeEC---CEEEEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhccccc
Confidence            446789999886   9999999999999999999999999999999999999999999999999999999987542110 


Q ss_pred             ---------------------h-----hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ---------------------A-----NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ---------------------~-----~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                                           .     .....+.+.+.+|..+|||+||+|||+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a  138 (302)
T PRK08272         84 GGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYC  138 (302)
T ss_pred             ccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEe
Confidence                                 0     0012344567889999999999999987

>PRK05864 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=6.6e-24  Score=164.36  Aligned_cols=105  Identities=30%  Similarity=0.411  Sum_probs=86.6

Q ss_pred             CCcccEEEEE-ecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh--
Q psy9280          36 VKFENILVDK-VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT--  112 (143)
Q Consensus        36 ~~~~~v~ve~-~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~--  112 (143)
                      ++++.+.++. ++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++....  
T Consensus         6 ~~~~~v~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~   82 (276)
T PRK05864          6 STMSLVLVDHPRP---EIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHV   82 (276)
T ss_pred             CCCCceEEeeecC---CEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhccccc
Confidence            3456688887 44   89999999999999999999999999999999999999999999999999999999874311  


Q ss_pred             ----hhhh---HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 ----YAAN---VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ----~~~~---~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                          ....   ....+.+.+.++..+||||||+|||+|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  120 (276)
T PRK05864         83 EGLTRPTYALRSMELLDDVILALRRLHQPVIAAVNGPA  120 (276)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence                0010   112345567888999999999999987

>PRK12478 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=5.4e-24  Score=166.54  Aligned_cols=105  Identities=30%  Similarity=0.529  Sum_probs=85.0

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcch-hhh----
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKE-MLN----  110 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~-~~~----  110 (143)
                      +.++.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+||++ +..    
T Consensus         2 ~~~~~v~~~~~~---~Va~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~   78 (298)
T PRK12478          2 PDFQTLLYTTAG---PVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEA   78 (298)
T ss_pred             CCceEEEEeccC---CEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchh
Confidence            456788888876   999999999999999999999999999999999999999999999999999999986 211    


Q ss_pred             hh-h-----hhhH---H-h--HHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         111 QT-Y-----AANV---K-T--GLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       111 ~~-~-----~~~~---~-~--~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .. .     ...+   . .  .....+.++..+|||+||+|||+|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a  123 (298)
T PRK12478         79 MMTDGRWDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWC  123 (298)
T ss_pred             cccccccCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccEE
Confidence            00 0     0000   0 0  112356678999999999999987

>PRK08290 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=6.6e-24  Score=165.34  Aligned_cols=105  Identities=28%  Similarity=0.378  Sum_probs=87.8

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh--
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY--  113 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~--  113 (143)
                      |+++.+.++.++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.....  
T Consensus         1 ~~~~~v~~~~~~---~Va~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~   77 (288)
T PRK08290          1 MEYEYVRYEVAG---RIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRD   77 (288)
T ss_pred             CCCceEEEEeeC---CEEEEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCccccccccccc
Confidence            467789999876   999999999999999999999999999999999999999999999999999999998632110  


Q ss_pred             -------------------hhhH---HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 -------------------AANV---KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 -------------------~~~~---~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                                         ....   ...+.+++.++.++|||+||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a  129 (288)
T PRK08290         78 PGPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGAC  129 (288)
T ss_pred             cccccccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence                               0001   12344566788999999999999987

>PRK08260 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=8.1e-24  Score=165.35  Aligned_cols=104  Identities=37%  Similarity=0.470  Sum_probs=87.1

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhh---h-
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ---T-  112 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~---~-  112 (143)
                      .|+.+.+++++   +|++|+||||++.|+++.+|+.+|.++|++++.|+++|+|||+|.|++||+|+|++++...   . 
T Consensus         2 ~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~   78 (296)
T PRK08260          2 TYETIRYDVAD---GIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDA   78 (296)
T ss_pred             CcceEEEeeeC---CEEEEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhcccccc
Confidence            46778899876   9999999999999999999999999999999999999999999999999999999987521   0 


Q ss_pred             -------------h--hhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 -------------Y--AANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 -------------~--~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                                   .  ...+...+..++.++..+||||||+|||+|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~a  124 (296)
T PRK08260         79 PRTPVEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPA  124 (296)
T ss_pred             cccccccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence                         0  001112234567889999999999999987

>PRK06143 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=5.8e-24  Score=163.14  Aligned_cols=103  Identities=29%  Similarity=0.416  Sum_probs=86.3

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhhhh-
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYAAN-  116 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~~~-  116 (143)
                      .++.+++..  ++|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++........ 
T Consensus         6 ~~~~~~~~~--~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~   83 (256)
T PRK06143          6 AHAGVTRDD--RGVATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLDQASAE   83 (256)
T ss_pred             ccceeeecC--CCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhcChhhHH
Confidence            457777542  38999999999999999999999999999999999999999999988 79999999998764322111 


Q ss_pred             -HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 -VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 -~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       +...+..++.++..+||||||+|||+|
T Consensus        84 ~~~~~~~~~~~~l~~~~kPvIAav~G~a  111 (256)
T PRK06143         84 AFISRLRDLCDAVRHFPVPVIARIPGWC  111 (256)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence             223456677899999999999999986

>PRK06144 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=8.6e-24  Score=162.64  Aligned_cols=104  Identities=27%  Similarity=0.422  Sum_probs=88.0

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhhh
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~~  115 (143)
                      ..+.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||+|.| ++||+|+|++++.......
T Consensus         6 ~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~~~~   82 (262)
T PRK06144          6 STDELLLEVRG---GIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFSTAE   82 (262)
T ss_pred             CCCceEEEeeC---CEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhccchh
Confidence            35678889877   9999999999999999999999999999999999999999999987 7999999999875432111


Q ss_pred             ---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 ---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                         .+...+.+++.++..+||||||+|||+|
T Consensus        83 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  113 (262)
T PRK06144         83 DAVAYERRIDRVLGALEQLRVPTIAAIAGAC  113 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence               1123345667889999999999999987

>PRK07260 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=6.4e-24  Score=162.69  Aligned_cols=103  Identities=27%  Similarity=0.406  Sum_probs=87.4

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh---
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA---  114 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~---  114 (143)
                      ++++.+++++   +|++|+||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++......   
T Consensus         1 ~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~   77 (255)
T PRK07260          1 FEHIIYEVED---DLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDV   77 (255)
T ss_pred             CCceEEEEEC---CEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccch
Confidence            4568888876   9999999999999999999999999999999999999999999999999999999988642111   


Q ss_pred             hh---HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 AN---VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~~---~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..   ....+.+++.++..+||||||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  109 (255)
T PRK07260         78 QSLVKIAELVNEISFAIKQLPKPVIMCVDGAV  109 (255)
T ss_pred             hhHHHHHHHHHHHHHHHHcCCCCEEEEecCee
Confidence            11   112345667889999999999999987

>PRK08139 enoyl-CoA hydratase; Validated

Probab=99.91  E-value=7.3e-24  Score=163.36  Aligned_cols=105  Identities=33%  Similarity=0.447  Sum_probs=88.6

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      +..+.+.++.++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.......
T Consensus         8 ~~~~~~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~   84 (266)
T PRK08139          8 TEAPLLLREDRD---GVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAARGLA   84 (266)
T ss_pred             ccCCceEEEeeC---CEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcccchh
Confidence            345678888876   99999999999999999999999999999999999999999999999999999999875422111


Q ss_pred             h---HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 N---VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~---~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .   ....+.+++.++..+||||||+|||+|
T Consensus        85 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  115 (266)
T PRK08139         85 YFRALFARCSRVMQAIVALPQPVIARVHGIA  115 (266)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECcee
Confidence            1   113345667889999999999999997

>PRK05980 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=9.1e-24  Score=162.19  Aligned_cols=101  Identities=38%  Similarity=0.526  Sum_probs=85.5

Q ss_pred             cEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhh---hh-
Q psy9280          40 NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQT---YA-  114 (143)
Q Consensus        40 ~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~---~~-  114 (143)
                      .+.++.++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++....   .. 
T Consensus         4 ~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~   80 (260)
T PRK05980          4 TVLIEIRD---GIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADV   80 (260)
T ss_pred             eEEEEEEC---CEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchh
Confidence            58888876   9999999999999999999999999999999999999999999988 7999999999875421   11 


Q ss_pred             --hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 --ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 --~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                        ..+...+.+++.++..+|||+||+|||+|
T Consensus        81 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  111 (260)
T PRK05980         81 ALRDFVRRGQAMTARLEAFPKPVIAAVNGLA  111 (260)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCEEEEEcCEE
Confidence              11113345567889999999999999987

>PRK08150 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=9.3e-24  Score=161.90  Aligned_cols=100  Identities=31%  Similarity=0.463  Sum_probs=84.9

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh--h
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA--N  116 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~--~  116 (143)
                      +.+.+++++   +|++|+||||++.|+++.+|+++|.+++++++  +++|+|||||.|++||+|+|++++.......  .
T Consensus         2 ~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~   76 (255)
T PRK08150          2 SLVSYELDG---GVATIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRERDAGEGMH   76 (255)
T ss_pred             ceEEEEeeC---CEEEEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhccchhHHH
Confidence            567888876   89999999999999999999999999999997  7799999999999999999999986432211  1


Q ss_pred             HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 ~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ....+...+.+|..+||||||+|||+|
T Consensus        77 ~~~~~~~~~~~l~~~~kPvIaav~G~a  103 (255)
T PRK08150         77 HSRRWHRVFDKIQYGRVPVIAALHGAV  103 (255)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence            123455677889999999999999987

>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=99.91  E-value=1.3e-23  Score=160.57  Aligned_cols=104  Identities=23%  Similarity=0.276  Sum_probs=88.5

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      +.++.+.+++++   +|++|+||+|++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.......
T Consensus         2 ~~~~~~~~~~~~---~v~~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~   78 (249)
T PRK07110          2 MMKVVELREVEE---GIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQTGK   78 (249)
T ss_pred             CCCceEEEEeeC---CEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhccchh
Confidence            456778888876   89999999999999999999999999999999999999999999999999999999876433211


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..... ..++.++..+|||+||+|||+|
T Consensus        79 ~~~~~-~~~~~~l~~~~kPvIaav~G~a  105 (249)
T PRK07110         79 GTFTE-ANLYSLALNCPIPVIAAMQGHA  105 (249)
T ss_pred             hhHhh-HHHHHHHHcCCCCEEEEecCce
Confidence            11111 4677899999999999999997

>PRK06494 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=1.1e-23  Score=161.73  Aligned_cols=104  Identities=33%  Similarity=0.423  Sum_probs=84.9

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~  114 (143)
                      |.|+.+.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.| ++||+|+|++++......
T Consensus         1 ~~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~   77 (259)
T PRK06494          1 MALPFSTVERKG---HVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGKR   77 (259)
T ss_pred             CCCceeEEEeEC---CEEEEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcCcc
Confidence            456788999876   9999999999999999999999999999999999999999999987 799999999987543221


Q ss_pred             hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ......+.. +..+..+||||||+|||+|
T Consensus        78 ~~~~~~~~~-~~~~~~~~kPvIaav~G~a  105 (259)
T PRK06494         78 GWPESGFGG-LTSRFDLDKPIIAAVNGVA  105 (259)
T ss_pred             hhhhHHHHH-HHHHhcCCCCEEEEECCEE
Confidence            111122222 3345689999999999987

>PRK07509 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=1.3e-23  Score=161.42  Aligned_cols=103  Identities=28%  Similarity=0.392  Sum_probs=86.4

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh--
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA--  115 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~--  115 (143)
                      ++.+.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.......  
T Consensus         2 ~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~   78 (262)
T PRK07509          2 MDRVSVTIED---GIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSPGNAVK   78 (262)
T ss_pred             CceEEEEeeC---CEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhcccchhhh
Confidence            5678899876   99999999999999999999999999999999999999999999999999999999876432111  


Q ss_pred             hHH-------hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVK-------TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~-------~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...       ..+.+.+..+..+||||||+|||+|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a  113 (262)
T PRK07509         79 LLFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVC  113 (262)
T ss_pred             hHhhhhHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            100       1223455678899999999999987

>PRK05869 enoyl-CoA hydratase; Validated

Probab=99.91  E-value=8.8e-24  Score=159.13  Aligned_cols=105  Identities=28%  Similarity=0.413  Sum_probs=86.3

Q ss_pred             cccEEEEEe--cCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          38 FENILVDKV--GKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        38 ~~~v~ve~~--~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      ++.+.++..  ..+++|++|+||||+ .|+++.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus         2 ~~~~~~~~~~~~~~~~i~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~   80 (222)
T PRK05869          2 NEFVNVVVSDGSQDAGLATLLLSRPP-TNALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLSAQE   80 (222)
T ss_pred             ccchhhhcccCcccCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccChhh
Confidence            455666664  123589999999998 59999999999999999999999999999999999999999999976432221


Q ss_pred             h--HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 N--VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~--~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .  ....+.+++.++.++||||||+|||+|
T Consensus        81 ~~~~~~~~~~~~~~i~~~~kPvIAav~G~a  110 (222)
T PRK05869         81 ADTAARVRQQAVDAVAAIPKPTVAAITGYA  110 (222)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEcCEe
Confidence            1  123456678899999999999999987

>PRK07659 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=1.6e-23  Score=160.86  Aligned_cols=104  Identities=35%  Similarity=0.509  Sum_probs=87.7

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      ++++.+.+++++   +|++|+||||++.|+++.+|+++|.++++++ .|+++|+||++|.|++||+|+|++++.......
T Consensus         3 ~~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~   78 (260)
T PRK07659          3 SKMESVVVKYEG---RVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSSNDES   78 (260)
T ss_pred             CCCceEEEEeeC---CEEEEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhccCch
Confidence            345678999887   9999999999999999999999999999999 588899999999999999999999976432111


Q ss_pred             ---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 ---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                         .....+.+++.++..+||||||+|||+|
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~~pvIaav~G~a  109 (260)
T PRK07659         79 KFDGVMNTISEIVVTLYTMPKLTISAIHGPA  109 (260)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCEEEEecCce
Confidence               1123455667889999999999999987

>KOG1681|consensus

Probab=99.91  E-value=1.6e-24  Score=160.93  Aligned_cols=115  Identities=30%  Similarity=0.444  Sum_probs=96.2

Q ss_pred             hhhcccCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchh
Q psy9280          29 IIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM  108 (143)
Q Consensus        29 ~r~~~~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~  108 (143)
                      ++..++...|+.+.+.++...+.|..+.||||.|+|+++..|+.|+.++++.+..||++|+|||+|.|++||+|.|+..+
T Consensus         9 s~~~~~~~s~ksl~v~vk~~~~~V~hv~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~   88 (292)
T KOG1681|consen    9 SLGESPDHSYKSLEVSVKSAQPFVYHVQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDM   88 (292)
T ss_pred             ccccCCccccceeeeeecCCCCeEEEEEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchh
Confidence            34444667788888887766778999999999999999999999999999999999999999999999999999998776


Q ss_pred             hhhhh-------hhh-------HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         109 LNQTY-------AAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       109 ~~~~~-------~~~-------~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....       ...       ....++..+..|++||||+|++|||+|
T Consensus        89 ~~~~~~~~~~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~C  137 (292)
T KOG1681|consen   89 ASDRILQPEGDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAAVHGAC  137 (292)
T ss_pred             hhhhccccccchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhh
Confidence            43210       000       114567778999999999999999997

>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase)

Probab=99.91  E-value=1.4e-23  Score=161.22  Aligned_cols=103  Identities=33%  Similarity=0.517  Sum_probs=84.7

Q ss_pred             cccEEEEE-ecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhh--
Q psy9280          38 FENILVDK-VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTY--  113 (143)
Q Consensus        38 ~~~v~ve~-~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~--  113 (143)
                      |+.+.+++ ++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++.....  
T Consensus         1 ~~~i~~~~~~~---~v~~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~   77 (259)
T TIGR01929         1 FTDIRYEKSTD---GIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYID   77 (259)
T ss_pred             CceEEEEEcCC---CEEEEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhccccc
Confidence            34578887 55   8999999999999999999999999999999999999999999988 79999999998643211  


Q ss_pred             hh-hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AA-NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~-~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .. .....+..++..+..+|||+||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  108 (259)
T TIGR01929        78 DSGVHRLNVLDVQRQIRTCPKPVIAMVNGYA  108 (259)
T ss_pred             hhhHHHHHHHHHHHHHHhCCCCEEEEEcCEE
Confidence            11 1111234567789999999999999987

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.

>PRK07827 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=2.4e-23  Score=159.91  Aligned_cols=104  Identities=28%  Similarity=0.331  Sum_probs=87.8

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhh--hhh
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ--TYA  114 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~--~~~  114 (143)
                      .+..+.+++++   +|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++...  ...
T Consensus         4 ~~~~i~~~~~~---~v~~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~   80 (260)
T PRK07827          4 VDTLVRYAVDG---GVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGGGDPY   80 (260)
T ss_pred             CCcceEEEeeC---CEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcccCch
Confidence            34567888776   9999999999999999999999999999999999999999999999999999999987542  111


Q ss_pred             h---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .   .+...+.+++.++..+||||||+|||+|
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  112 (260)
T PRK07827         81 DAAVARAREMTALLRAIVELPKPVIAAIDGHV  112 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCCEEEEEcCee
Confidence            1   1123455677899999999999999987

>PRK07799 enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=1.4e-23  Score=161.41  Aligned_cols=104  Identities=30%  Similarity=0.428  Sum_probs=85.1

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN  116 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~  116 (143)
                      .++.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++........
T Consensus         3 ~~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~   79 (263)
T PRK07799          3 GGPHALVEQRG---HTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPGDS   79 (263)
T ss_pred             CCceEEEEEEC---CEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhccccch
Confidence            35678899887   999999999999999999999999999999999999999999999999999999999764321111


Q ss_pred             HH-----hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 VK-----TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 ~~-----~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +.     ......+.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a  111 (263)
T PRK07799         80 FKDGSYDPSRIDALLKGRRLTKPLIAAVEGPA  111 (263)
T ss_pred             hhhhhhhhhHHHHHHHHhcCCCCEEEEECCeE
Confidence            10     0111223457899999999999986

>PRK08258 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=2.2e-23  Score=161.51  Aligned_cols=101  Identities=25%  Similarity=0.370  Sum_probs=86.1

Q ss_pred             cEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhh----hhhh
Q psy9280          40 NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ----TYAA  115 (143)
Q Consensus        40 ~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~----~~~~  115 (143)
                      .+.+++++   +|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++...    ....
T Consensus        18 ~~~~~~~~---~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~   94 (277)
T PRK08258         18 HFLWEVDD---GVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPE   94 (277)
T ss_pred             ceEEEEEC---CEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhH
Confidence            68888876   9999999999999999999999999999999999999999999999999999999987431    1111


Q ss_pred             --hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 --NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 --~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                        .+...+.+++.+|..+||||||+|||+|
T Consensus        95 ~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a  124 (277)
T PRK08258         95 LLAFTRMTGDLVKAMRACPQPIIAAVDGVC  124 (277)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence              1113345677899999999999999987

>PRK09245 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=1.9e-23  Score=160.85  Aligned_cols=101  Identities=35%  Similarity=0.511  Sum_probs=85.3

Q ss_pred             cEEEEEecCCCcEEEEEEcCCCCCCCCCH-HHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh-----
Q psy9280          40 NILVDKVGKNKNVGLVQLNRPKSLNALCD-ALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY-----  113 (143)
Q Consensus        40 ~v~ve~~~~~~~V~~I~ln~p~~~Nal~~-~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~-----  113 (143)
                      .+.+++++   +|++|+||||++.|+++. +|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.....     
T Consensus         4 ~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~   80 (266)
T PRK09245          4 FLLVERDG---HIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGS   80 (266)
T ss_pred             ceEEEEEC---CEEEEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhcccccccc
Confidence            58888876   999999999999999995 999999999999999999999999999999999999998754211     


Q ss_pred             h----hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 A----ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~----~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .    ..+...+..++.++..+|||+||+|||+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a  114 (266)
T PRK09245         81 PADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPA  114 (266)
T ss_pred             chhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEe
Confidence            0    11112344567889999999999999987

>PRK06127 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=2.5e-23  Score=160.63  Aligned_cols=104  Identities=27%  Similarity=0.460  Sum_probs=87.3

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhh--
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTY--  113 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~--  113 (143)
                      ..+.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||+|.| ++||+|+|++++.....  
T Consensus         9 ~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~   85 (269)
T PRK06127          9 PTGKLLAEKTG---GLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESRSDA   85 (269)
T ss_pred             CCCceEEEEEC---CEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcccch
Confidence            34568888876   9999999999999999999999999999999999999999999987 79999999998754211  


Q ss_pred             h--hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 A--ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~--~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .  ..+...+..++.++..+||||||+|||+|
T Consensus        86 ~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a  117 (269)
T PRK06127         86 EAVAAYEQAVEAAQAALADYAKPTIACIRGYC  117 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence            1  11123344567889999999999999986

>PRK06688 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=1.8e-23  Score=160.29  Aligned_cols=102  Identities=34%  Similarity=0.474  Sum_probs=88.5

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh-hhH
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA-ANV  117 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~-~~~  117 (143)
                      +.+.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++...... ...
T Consensus         5 ~~i~~~~~~---~v~~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~   81 (259)
T PRK06688          5 TDLLVELED---GVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAPPKPPDE   81 (259)
T ss_pred             CceEEEEEC---CEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccCcchHHH
Confidence            568888887   9999999999989999999999999999999999999999999999999999999988653222 112


Q ss_pred             HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         118 KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       118 ~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...+.+++.++..+|||+||+|||+|
T Consensus        82 ~~~~~~~~~~l~~~~kp~Iaav~G~a  107 (259)
T PRK06688         82 LAPVNRFLRAIAALPKPVVAAVNGPA  107 (259)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEECCee
Confidence            24456778899999999999999987

>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB

Probab=99.90  E-value=1.9e-23  Score=160.10  Aligned_cols=99  Identities=29%  Similarity=0.413  Sum_probs=82.4

Q ss_pred             EEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh--hh---
Q psy9280          41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY--AA---  115 (143)
Q Consensus        41 v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~--~~---  115 (143)
                      +.+++++   +|++|+||||++.|+++.+|+.+|.+++++++.|+ +|+|||||.|++||+|+|++++.....  ..   
T Consensus         1 ~~~e~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~   76 (256)
T TIGR02280         1 ILSALEA---GVARLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTPGGAPDLGR   76 (256)
T ss_pred             CeEEEEC---CEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhccccchhHHH
Confidence            3567776   99999999999999999999999999999999998 999999999999999999999764211  11   


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....+..++.++..+||||||+|||+|
T Consensus        77 ~~~~~~~~~~~~l~~~~kPvIaav~G~a  104 (256)
T TIGR02280        77 TIETFYNPLVRRLRALPLPVVCAVNGVA  104 (256)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            1112234456789999999999999987

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).

>PRK09076 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=2.1e-23  Score=160.15  Aligned_cols=101  Identities=28%  Similarity=0.448  Sum_probs=85.2

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhhh--
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYAA--  115 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~~--  115 (143)
                      ..+.+++++   +|++|+||||++ |+++.+|+.+|.+++++++.|+++|+|||+|.| ++||+|+|++++.......  
T Consensus         3 ~~v~~~~~~---~v~~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~~~~~~~   78 (258)
T PRK09076          3 IELDLEIDG---HVAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADGDKAVAR   78 (258)
T ss_pred             eEEEEEEEC---CEEEEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhcChhhHH
Confidence            468888876   999999999985 999999999999999999999999999999987 7899999999875432211  


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....+...+.++..+||||||+|||+|
T Consensus        79 ~~~~~~~~~~~~l~~~~kPvIAav~G~a  106 (258)
T PRK09076         79 EMARRFGEAFEALSAFRGVSIAAINGYA  106 (258)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence            1223455677889999999999999986

>PRK07657 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=2e-23  Score=160.39  Aligned_cols=102  Identities=36%  Similarity=0.521  Sum_probs=86.3

Q ss_pred             ccEEEEE-ecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhhh-
Q psy9280          39 ENILVDK-VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYAA-  115 (143)
Q Consensus        39 ~~v~ve~-~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~~-  115 (143)
                      +++.+++ ++   +|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.| ++||+|+|++++....... 
T Consensus         3 ~~v~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~   79 (260)
T PRK07657          3 QNISVDYVTP---HVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGMNEEQV   79 (260)
T ss_pred             ceEEEEEccC---CEEEEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcCChhhH
Confidence            4788886 44   8999999999999999999999999999999999999999999988 5999999999975422211 


Q ss_pred             -hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 -NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 -~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       .....+..++..+..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a  108 (260)
T PRK07657         80 RHAVSLIRTTMEMVEQLPQPVIAAINGIA  108 (260)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEEcCEe
Confidence             1123456677899999999999999987

>PRK11423 methylmalonyl-CoA decarboxylase; Provisional

Probab=99.90  E-value=2.3e-23  Score=160.22  Aligned_cols=104  Identities=24%  Similarity=0.405  Sum_probs=87.5

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC--CCCccCCCCcchhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN--EKAFAAGADIKEMLNQTY  113 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~--g~~FsaG~Dl~~~~~~~~  113 (143)
                      |+|+.+.++.++   +|++||||||+++|+++.+|+++|.+++++++.|+ +|+|||||.  |++||+|+|++++.....
T Consensus         1 ~~~~~~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~~   76 (261)
T PRK11423          1 MSMQYVNVVTIN---KIATITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGGR   76 (261)
T ss_pred             CCccceEEEeEC---CEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhccc
Confidence            467789999887   99999999999999999999999999999999887 999999985  389999999998753221


Q ss_pred             -hhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 -AANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 -~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       ...+...+.+++.++..+||||||+|||+|
T Consensus        77 ~~~~~~~~~~~l~~~i~~~~kPvIaav~G~a  107 (261)
T PRK11423         77 DPLSYDDPLRQILRMIQKFPKPVIAMVEGSV  107 (261)
T ss_pred             cHHHHHHHHHHHHHHHHhCCCCEEEEEecEE
Confidence             111223455677889999999999999987

>PRK06210 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=2e-23  Score=161.19  Aligned_cols=106  Identities=33%  Similarity=0.527  Sum_probs=87.9

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      |.|+.+.+++++  ++|++|+||||++.|++|.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.......
T Consensus         2 ~~~~~i~~~~~~--~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~   79 (272)
T PRK06210          2 MAYDAVLYEVAD--SGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSD   79 (272)
T ss_pred             CCcceEEEEECC--CCEEEEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCccc
Confidence            567889998752  279999999999999999999999999999999999999999999999999999999875422110


Q ss_pred             --------hH-H---hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 --------NV-K---TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 --------~~-~---~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                              .+ .   ..+++.+.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  119 (272)
T PRK06210         80 GRRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGAC  119 (272)
T ss_pred             ccccccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCee
Confidence                    00 0   1234456789999999999999987

>PRK08259 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=1.5e-23  Score=160.63  Aligned_cols=102  Identities=34%  Similarity=0.410  Sum_probs=81.6

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHH
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVK  118 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~  118 (143)
                      +.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++..........
T Consensus         3 ~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~~~~~~~   79 (254)
T PRK08259          3 MSVRVERNG---PVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGRGNRLHP   79 (254)
T ss_pred             ceEEEEEEC---CEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhcccchhhhh
Confidence            458888876   99999999999999999999999999999999999999999999999999999999875432111110


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         119 TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       119 ~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ......+..+..+|||+||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~kPvIaav~G~a  104 (254)
T PRK08259         80 SGDGPMGPSRMRLSKPVIAAVSGYA  104 (254)
T ss_pred             hhcchhhhHHhcCCCCEEEEECCEE
Confidence            1011112233479999999999986

>PRK07511 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=2.5e-23  Score=159.75  Aligned_cols=101  Identities=31%  Similarity=0.444  Sum_probs=86.5

Q ss_pred             cEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh--h-hh-
Q psy9280          40 NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT--Y-AA-  115 (143)
Q Consensus        40 ~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~--~-~~-  115 (143)
                      ++.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++....  . .. 
T Consensus         4 ~~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~~~~~~~~   80 (260)
T PRK07511          4 ELLSRREG---STLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRAKPPSVQ   80 (260)
T ss_pred             eeEEEeEC---CEEEEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhcccccchhH
Confidence            47788876   99999999999999999999999999999999999999999999999999999999875421  1 11 


Q ss_pred             -hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 -NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 -~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       .....+.+++.++..+|||+||+|||+|
T Consensus        81 ~~~~~~~~~~~~~l~~~~kpvIAav~G~a  109 (260)
T PRK07511         81 AASIDGLHDWIRAIRAFPKPVIAAVEGAA  109 (260)
T ss_pred             HHHHHHHHHHHHHHHcCCCCEEEEECCee
Confidence             1124456677899999999999999987

>PRK07658 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=2.4e-23  Score=159.59  Aligned_cols=101  Identities=33%  Similarity=0.496  Sum_probs=85.6

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh-h--
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA-A--  115 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~-~--  115 (143)
                      +.+.+++++   +|++|+||||++ |+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++...... .  
T Consensus         2 ~~i~~~~~~---~v~~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~   77 (257)
T PRK07658          2 KFLSVRVED---HVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSVTEAEQAT   77 (257)
T ss_pred             ceEEEEeeC---CEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccCchhhHH
Confidence            467888876   999999999985 999999999999999999999999999999999999999999987543221 1  


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ........++.+|..+|||+||+|||+|
T Consensus        78 ~~~~~~~~~~~~l~~~~kpvIAav~G~a  105 (257)
T PRK07658         78 ELAQLGQVTFERVEKFSKPVIAAIHGAA  105 (257)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEcCee
Confidence            1123445677899999999999999986

>PRK06563 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=1.9e-23  Score=160.10  Aligned_cols=100  Identities=27%  Similarity=0.506  Sum_probs=81.4

Q ss_pred             EEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh--hHH
Q psy9280          41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA--NVK  118 (143)
Q Consensus        41 v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~--~~~  118 (143)
                      |.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.......  ...
T Consensus         1 ~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~   77 (255)
T PRK06563          1 VSRERRG---HVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAGGFPFP   77 (255)
T ss_pred             CeEEEEC---CEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccchhhhh
Confidence            3566666   89999999999999999999999999999999999999999999999999999999875422111  111


Q ss_pred             hHHHHHH-HHHhcCCCcEEEEEecCC
Q psy9280         119 TGLLEHW-DNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       119 ~~~~~~~-~~l~~~~kP~IAav~G~a  143 (143)
                      ....+.+ ..+..+||||||+|||+|
T Consensus        78 ~~~~~~~~~~l~~~~kPvIAav~G~a  103 (255)
T PRK06563         78 EGGIDPWGTVGRRLSKPLVVAVQGYC  103 (255)
T ss_pred             hhhhHHHHHHHhcCCCCEEEEEcCee
Confidence            1122333 358899999999999987

>PRK07396 dihydroxynaphthoic acid synthetase; Validated

Probab=99.90  E-value=2.6e-23  Score=160.83  Aligned_cols=105  Identities=32%  Similarity=0.447  Sum_probs=86.8

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhh--
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQT--  112 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~--  112 (143)
                      .+++.+.+++++   +|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.| ++||+|+|++++....  
T Consensus        10 ~~~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~   86 (273)
T PRK07396         10 KEYEDILYKSAD---GIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGGYV   86 (273)
T ss_pred             CCCcceEEEecC---CEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhccccc
Confidence            356788998876   9999999999999999999999999999999999999999999988 6999999999874321  


Q ss_pred             hhhhHH-hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 YAANVK-TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~~~~~~-~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...... .....++..+..+||||||+|||+|
T Consensus        87 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  118 (273)
T PRK07396         87 DDDGVPRLNVLDLQRLIRTCPKPVIAMVAGYA  118 (273)
T ss_pred             chhhhhhhHHHHHHHHHHhCCCCEEEEECCEE
Confidence            111111 1223456789999999999999986

>PLN02600 enoyl-CoA hydratase

Probab=99.90  E-value=2.2e-23  Score=159.49  Aligned_cols=95  Identities=24%  Similarity=0.416  Sum_probs=81.0

Q ss_pred             CCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC-CCCccCCCCcchhhhhhhhh--hHHhHHHHHH
Q psy9280          49 NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKEMLNQTYAA--NVKTGLLEHW  125 (143)
Q Consensus        49 ~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~-g~~FsaG~Dl~~~~~~~~~~--~~~~~~~~~~  125 (143)
                      +++|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||. |++||+|+|++++.......  .+...+..++
T Consensus         2 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~   81 (251)
T PLN02600          2 DSGIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKMSPSEVQKFVNSLRSTF   81 (251)
T ss_pred             CCcEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhccChHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999999999997 68999999999875432211  1223455667


Q ss_pred             HHHhcCCCcEEEEEecCC
Q psy9280         126 DNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       126 ~~l~~~~kP~IAav~G~a  143 (143)
                      .++..+|||+||+|||+|
T Consensus        82 ~~l~~~~kPvIAav~G~a   99 (251)
T PLN02600         82 SSLEALSIPTIAVVEGAA   99 (251)
T ss_pred             HHHHhCCCCEEEEecCee
Confidence            889999999999999987

>PLN02888 enoyl-CoA hydratase

Probab=99.90  E-value=3.9e-23  Score=159.30  Aligned_cols=104  Identities=37%  Similarity=0.575  Sum_probs=85.7

Q ss_pred             CCcccEEEEE-ecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh
Q psy9280          36 VKFENILVDK-VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        36 ~~~~~v~ve~-~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~  114 (143)
                      ...+.+.++. ++   +|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++......
T Consensus         6 ~~~~~i~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~   82 (265)
T PLN02888          6 VSENLILVPKSRN---GIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVFKG   82 (265)
T ss_pred             CCCCeEEEEeccC---CEEEEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhccc
Confidence            3446778876 44   8999999999999999999999999999999999999999999999999999999986532111


Q ss_pred             hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      . ......+.+..+..+|||+||+|||+|
T Consensus        83 ~-~~~~~~~~~~~i~~~~kPvIaav~G~a  110 (265)
T PLN02888         83 D-VKDVETDPVAQMERCRKPIIGAINGFA  110 (265)
T ss_pred             h-hhHHHHHHHHHHHhCCCCEEEEECCee
Confidence            1 112234556788999999999999987

>PRK08252 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=3e-23  Score=158.90  Aligned_cols=100  Identities=33%  Similarity=0.522  Sum_probs=81.7

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHH
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVK  118 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~  118 (143)
                      +.+.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++..........
T Consensus         3 ~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~   79 (254)
T PRK08252          3 DEVLVERRG---RVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARGERPSIPG   79 (254)
T ss_pred             ceEEEEEEC---CEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcccchhhhH
Confidence            467888876   99999999999999999999999999999999999999999999999999999999886432111111


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         119 TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       119 ~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..+..++  ...+||||||+|||+|
T Consensus        80 ~~~~~~~--~~~~~kPvIaav~G~a  102 (254)
T PRK08252         80 RGFGGLT--ERPPRKPLIAAVEGYA  102 (254)
T ss_pred             HHHHHHH--HhcCCCCEEEEECCEE
Confidence            1222222  2479999999999986

>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=99.90  E-value=3.3e-23  Score=158.84  Aligned_cols=103  Identities=25%  Similarity=0.455  Sum_probs=86.0

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      ++|+.+.+++++   +|++|+||||++.|+++.+|+++|.+++++++  +++|+||++|.|++||+|+|++++.......
T Consensus         1 ~~~~~i~~~~~~---~i~~itlnrp~~~Nal~~~~~~~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl~~~~~~~~~~   75 (255)
T PRK07112          1 MDYQTIRVRQQG---DVCFLQLHRPEAQNTINDRLIAECMDVLDRCE--HAATIVVLEGLPEVFCFGADFSAIAEKPDAG   75 (255)
T ss_pred             CCCceEEEEeeC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHhh--cCceEEEEEcCCCCcccCcCHHHHhhccccc
Confidence            357789999876   99999999999999999999999999999998  3699999999999999999999876422111


Q ss_pred             ---h-HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 ---N-VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ---~-~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                         . ....+.+++.++..+||||||+|||+|
T Consensus        76 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  107 (255)
T PRK07112         76 RADLIDAEPLYDLWHRLATGPYVTIAHVRGKV  107 (255)
T ss_pred             hhhhhhHHHHHHHHHHHHcCCCCEEEEEecEE
Confidence               1 112345677889999999999999986

>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=99.90  E-value=5.2e-23  Score=166.40  Aligned_cols=121  Identities=20%  Similarity=0.254  Sum_probs=94.2

Q ss_pred             CCCcchhhhhhhcccCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCc
Q psy9280          20 SSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAF   99 (143)
Q Consensus        20 ~~~~~~~~~~r~~~~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F   99 (143)
                      +..++.+.+++.+....-.+.+.++..+   ++++|+||||+++|+|+.+|+.+|.++++.++.|+++++|||+|.|++|
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~v~~e~~~---~~~~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~GkaF   99 (407)
T PLN02851         23 SYGRSFSALPNYAANDDLQDQVLVEGRA---KSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAF   99 (407)
T ss_pred             cCCcccccCCcccccCCCCCCeEEEEEC---CEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCc
Confidence            3334444444444433445678888876   8999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcchhhhhhh----hh--hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         100 AAGADIKEMLNQTY----AA--NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       100 saG~Dl~~~~~~~~----~~--~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      |+|+|++++.....    ..  .+......+...|..+|||+||+|||+|
T Consensus       100 cAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKPvIA~v~G~a  149 (407)
T PLN02851        100 CSGADVVSLYHLINEGNVEECKLFFENLYKFVYLQGTYLKPNVAIMDGIT  149 (407)
T ss_pred             cCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEE
Confidence            99999999854211    11  1113344556778899999999999986

>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase

Probab=99.90  E-value=7e-23  Score=156.77  Aligned_cols=98  Identities=23%  Similarity=0.390  Sum_probs=82.9

Q ss_pred             EEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhH
Q psy9280          41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTG  120 (143)
Q Consensus        41 v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~  120 (143)
                      +.+++++   +|++|+||||+ .|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++..... ......
T Consensus         3 v~~~~~~---~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~-~~~~~~   77 (251)
T TIGR03189         3 VWLERDG---KLLRLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMPDQC-AAMLAS   77 (251)
T ss_pred             EEEEeeC---CEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCchhH-HHHHHH
Confidence            6677776   89999999997 699999999999999999999999999999999999999999998642211 111233


Q ss_pred             HHHHHHHHhcCCCcEEEEEecCC
Q psy9280         121 LLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       121 ~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +.+++.++..+||||||+|||+|
T Consensus        78 ~~~~~~~l~~~~kPvIaav~G~a  100 (251)
T TIGR03189        78 LHKLVIAMLDSPVPILVAVRGQC  100 (251)
T ss_pred             HHHHHHHHHhCCCCEEEEecCee
Confidence            45667889999999999999987

This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.

>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=99.89  E-value=8.6e-23  Score=164.37  Aligned_cols=105  Identities=30%  Similarity=0.432  Sum_probs=87.3

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh-hh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT-YA  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~-~~  114 (143)
                      +.++.+.+++++   +|++|+||||+++|+++.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.... ..
T Consensus         8 ~~~~~v~~~~~~---~v~~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~   84 (379)
T PLN02874          8 PAEEVVLGEEKG---RVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRESD   84 (379)
T ss_pred             CCCCceEEEEEC---CEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhcccc
Confidence            456778888876   89999999999999999999999999999999999999999999999999999999875422 11


Q ss_pred             hhHH---hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ANVK---TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~~~~---~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ....   ..+..++.++..+|||+||+|||+|
T Consensus        85 ~~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~a  116 (379)
T PLN02874         85 DSCLEVVYRMYWLCYHIHTYKKTQVALVHGLV  116 (379)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCCEEEEecCeE
Confidence            1111   2233445788999999999999986

>KOG1680|consensus

Probab=99.89  E-value=1.7e-23  Score=159.17  Aligned_cols=109  Identities=46%  Similarity=0.780  Sum_probs=91.5

Q ss_pred             CCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh
Q psy9280          35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        35 ~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~  114 (143)
                      ...++...++..+.+++|+.|+||||+++|+|+..++.||.+++..++.|+++.++|+||.|+.||+|+||+++......
T Consensus        30 ~~~~~~~~~~~~~~d~~I~lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~  109 (290)
T KOG1680|consen   30 DQEFEPIKIELVGEDNGIALITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQ  109 (290)
T ss_pred             ccccCcceeEEeecCCCeEEEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhcccc
Confidence            33444555555555679999999999999999999999999999999999999999999999999999999999876544


Q ss_pred             hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +.....+.+.+..+...+||+||+|||+|
T Consensus       110 ~~~~~~~~~~~~~~~~~~KPvIaainG~A  138 (290)
T KOG1680|consen  110 DVSDGIFLRVWDLVSRLKKPVIAAINGFA  138 (290)
T ss_pred             ccccccccchhhhhhhcccceeEeeecee
Confidence            43334456666667799999999999987

>PRK07854 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=9.4e-23  Score=155.37  Aligned_cols=96  Identities=41%  Similarity=0.520  Sum_probs=81.2

Q ss_pred             EEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhH
Q psy9280          41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTG  120 (143)
Q Consensus        41 v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~  120 (143)
                      +.+++++   +|++|+||||++.|++|.+|+.+|.+++++++.+ ++|+|||||.|++||+|+|+++...   .......
T Consensus         2 ~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~---~~~~~~~   74 (243)
T PRK07854          2 IGVTRDG---QVLTIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY---ADDFPDA   74 (243)
T ss_pred             ceEEEeC---CEEEEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh---HHHHHHH
Confidence            5677776   8999999999999999999999999999999865 8999999999999999999986321   1112234


Q ss_pred             HHHHHHHHhcCCCcEEEEEecCC
Q psy9280         121 LLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       121 ~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +.+++.++..+|||+||+|||+|
T Consensus        75 ~~~~~~~l~~~~kP~Iaav~G~a   97 (243)
T PRK07854         75 LIEMLHAIDAAPVPVIAAINGPA   97 (243)
T ss_pred             HHHHHHHHHhCCCCEEEEecCcc
Confidence            55677889999999999999987

>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=99.89  E-value=1.2e-22  Score=164.16  Aligned_cols=103  Identities=24%  Similarity=0.372  Sum_probs=85.8

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh---h
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY---A  114 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~---~  114 (143)
                      ...|.+++++   +|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.....   .
T Consensus        36 ~~~V~~e~~g---~v~~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~  112 (401)
T PLN02157         36 DYQVLVEGSG---CSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSP  112 (401)
T ss_pred             CCceEEEEEC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccch
Confidence            4568888876   999999999999999999999999999999999999999999999999999999998754211   1


Q ss_pred             h---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .   .+......++..|..+|||+||+|||+|
T Consensus       113 ~~~~~~~~~~~~l~~~i~~~pkPvIA~v~G~a  144 (401)
T PLN02157        113 DAIREFFSSLYSFIYLLGTYLKPHVAILNGVT  144 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEEeCeE
Confidence            1   0111223345778999999999999986

>PLN02921 naphthoate synthase

Probab=99.89  E-value=1.1e-22  Score=161.00  Aligned_cols=108  Identities=33%  Similarity=0.486  Sum_probs=87.7

Q ss_pred             CCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhh
Q psy9280          35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTY  113 (143)
Q Consensus        35 ~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~  113 (143)
                      +.+|+.+.++++. +++|++|+||||++.|+|+.+|+.+|.+++++++.|+++++|||+|.| ++||+|+|++++.....
T Consensus        61 ~~~~~~i~~~~~~-~~~Va~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~~  139 (327)
T PLN02921         61 GKEFTDIIYEKAV-GEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDGY  139 (327)
T ss_pred             ccCCceEEEEEec-CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhcccc
Confidence            3468889998841 238999999999999999999999999999999999999999999988 89999999998753211


Q ss_pred             --hhhHH-hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 --AANVK-TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 --~~~~~-~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                        ..... .....++.+|..+||||||+|||+|
T Consensus       140 ~~~~~~~~~~~~~l~~~l~~~~kPvIAaVnG~a  172 (327)
T PLN02921        140 VGPDDAGRLNVLDLQIQIRRLPKPVIAMVAGYA  172 (327)
T ss_pred             cchhHHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence              11111 1223456789999999999999986

>PRK07938 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=9.4e-23  Score=155.87  Aligned_cols=93  Identities=28%  Similarity=0.413  Sum_probs=79.3

Q ss_pred             CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh---HHhHHHHHHH
Q psy9280          50 KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN---VKTGLLEHWD  126 (143)
Q Consensus        50 ~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~---~~~~~~~~~~  126 (143)
                      ++|++|+||||+ .|+++.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++........   ....+.+.+.
T Consensus        10 ~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~   88 (249)
T PRK07938         10 PGIAEVTVDYPP-VNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQATPGFTALIDANRGCFAAFR   88 (249)
T ss_pred             CCEEEEEECCCC-cccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhccchhHHHHHHHHHHHHHH
Confidence            489999999998 599999999999999999999999999999999999999999998754321111   1133456778


Q ss_pred             HHhcCCCcEEEEEecCC
Q psy9280         127 NITKAKKPVIAAVNGYA  143 (143)
Q Consensus       127 ~l~~~~kP~IAav~G~a  143 (143)
                      ++..+|||+||+|||+|
T Consensus        89 ~i~~~~kPvIAav~G~a  105 (249)
T PRK07938         89 AVYECAVPVIAAVHGFC  105 (249)
T ss_pred             HHHhCCCCEEEEEcCEE
Confidence            89999999999999986

>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional

Probab=99.89  E-value=1.3e-22  Score=161.47  Aligned_cols=102  Identities=31%  Similarity=0.543  Sum_probs=85.8

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhh---h
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTY---A  114 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~---~  114 (143)
                      +.+.+++++   +|++|+||||+++|+++.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++.....   .
T Consensus         3 ~~v~~~~~~---~v~~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~   79 (342)
T PRK05617          3 DEVLAEVEG---GVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDP   79 (342)
T ss_pred             ceEEEEEEC---CEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCc
Confidence            357888877   9999999999999999999999999999999999999999999988 99999999998754211   1


Q ss_pred             h---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .   .......+++.++..+|||+||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~i~~~~kPvIAaVnG~a  111 (342)
T PRK05617         80 LAADRFFREEYRLNALIARYPKPYIALMDGIV  111 (342)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEE
Confidence            1   1112334567889999999999999986

>PRK03580 carnitinyl-CoA dehydratase; Provisional

Probab=99.89  E-value=1.4e-22  Score=155.72  Aligned_cols=100  Identities=31%  Similarity=0.449  Sum_probs=83.4

Q ss_pred             cEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhh-hhH
Q psy9280          40 NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYA-ANV  117 (143)
Q Consensus        40 ~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~-~~~  117 (143)
                      .+.+++++   +|++|+||||+ .|+++.+|+++|.+++++++.|+++|+|||+|.| ++||+|+|++++...... ..+
T Consensus         4 ~i~~~~~~---~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~~~~~~~   79 (261)
T PRK03580          4 SLHTTRNG---SILEITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAPDADF   79 (261)
T ss_pred             eEEEEEEC---CEEEEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccCcchhhh
Confidence            58888877   99999999996 6999999999999999999999999999999987 799999999987643221 111


Q ss_pred             HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         118 KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       118 ~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .......+.++..+|||+||+|||+|
T Consensus        80 ~~~~~~~~~~l~~~~kPvIaav~G~a  105 (261)
T PRK03580         80 GPGGFAGLTEIFDLDKPVIAAVNGYA  105 (261)
T ss_pred             hhhhhHHHHHHHhCCCCEEEEECCee
Confidence            11223456789999999999999987

>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix

Probab=99.88  E-value=1.5e-22  Score=153.94  Aligned_cols=98  Identities=36%  Similarity=0.522  Sum_probs=86.0

Q ss_pred             EEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh--hHHhH
Q psy9280          43 VDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA--NVKTG  120 (143)
Q Consensus        43 ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~--~~~~~  120 (143)
                      ++.++   +|++|+||+|++.|++|.+|+++|.++|+.++.|+++|+||++|.+++||+|+|++++.......  .+...
T Consensus         2 ~~~~~---~v~~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~~~~~~~~~~~~   78 (245)
T PF00378_consen    2 YEIED---GVATITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNSDEEEAREFFRR   78 (245)
T ss_dssp             EEEET---TEEEEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHHHHHHHHHHHHH
T ss_pred             EEEEC---CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhccccccccccchh
Confidence            56666   99999999998899999999999999999999999999999999999999999999998773222  23366


Q ss_pred             HHHHHHHHhcCCCcEEEEEecCC
Q psy9280         121 LLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       121 ~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +..++.++..+|||+||+|||+|
T Consensus        79 ~~~l~~~l~~~~kp~Iaav~G~a  101 (245)
T PF00378_consen   79 FQELLSRLANFPKPTIAAVNGHA  101 (245)
T ss_dssp             HHHHHHHHHHSSSEEEEEESSEE
T ss_pred             hccccccchhhhhheeecccccc
Confidence            77888999999999999999986

Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....

>PLN02988 3-hydroxyisobutyryl-CoA hydrolase

Probab=99.88  E-value=5.7e-22  Score=159.54  Aligned_cols=102  Identities=27%  Similarity=0.440  Sum_probs=83.6

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh--
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN--  116 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~--  116 (143)
                      ..+.++.++   +|++|+||||+++|+|+.+|+.+|.++|++++.|+++++|||+|.|++||+|+|++++........  
T Consensus         9 ~~v~~~~~~---~i~~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~   85 (381)
T PLN02988          9 SQVLVEEKS---SVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWR   85 (381)
T ss_pred             CceEEEEEC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchh
Confidence            367888776   999999999999999999999999999999999999999999999999999999999753211110  


Q ss_pred             ----HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 ----VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 ----~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                          +......+...+..+|||+||+|||+|
T Consensus        86 ~~~~~f~~~~~l~~~i~~~pKPvIa~v~G~a  116 (381)
T PLN02988         86 LGANFFSDEYMLNYVMATYSKAQVSILNGIV  116 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEecCeE
Confidence                011112334678899999999999986

>PRK08788 enoyl-CoA hydratase; Validated

Probab=99.88  E-value=8.1e-22  Score=153.50  Aligned_cols=113  Identities=15%  Similarity=0.151  Sum_probs=86.9

Q ss_pred             hhhcccCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhc-----CCCeeEEEEEcC-CCCccCC
Q psy9280          29 IIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQ-----DSSVAAIVLTGN-EKAFAAG  102 (143)
Q Consensus        29 ~r~~~~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~-----d~~vr~vVltg~-g~~FsaG  102 (143)
                      .|++.+...+.++.++.+. +++|++|+|| |+++|+++.+|+++|.+++++++.     |+++|+|||+|. |++||+|
T Consensus         5 ~~~~~~~~~~~~~~i~~e~-~~~ia~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG   82 (287)
T PRK08788          5 VRPFPEAGELSQLRVYYEE-ERNVMWMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLG   82 (287)
T ss_pred             ccccccccccCceEEEEEc-cCCEEEEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeC
Confidence            3566666777787777763 5599999996 888999999999999999999998     889999999998 8999999


Q ss_pred             CCcchhhhh---hhhhhH---HhHHHHHHHHHh---cCCCcEEEEEecCC
Q psy9280         103 ADIKEMLNQ---TYAANV---KTGLLEHWDNIT---KAKKPVIAAVNGYA  143 (143)
Q Consensus       103 ~Dl~~~~~~---~~~~~~---~~~~~~~~~~l~---~~~kP~IAav~G~a  143 (143)
                      +|++++...   ......   ...+...+.++.   .+||||||+|||+|
T Consensus        83 ~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~a  132 (287)
T PRK08788         83 GDLALFAELIRAGDRDALLAYARACVDGVHAFHRGFGAGAISIALVQGDA  132 (287)
T ss_pred             cCHHHHhhhccccchHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCee
Confidence            999987531   111111   112223333333   79999999999997

>PRK08321 naphthoate synthase; Validated

Probab=99.88  E-value=5.7e-22  Score=155.37  Aligned_cols=104  Identities=27%  Similarity=0.298  Sum_probs=83.9

Q ss_pred             CcccEEEEE--ecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-------CCccCCCCcch
Q psy9280          37 KFENILVDK--VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-------KAFAAGADIKE  107 (143)
Q Consensus        37 ~~~~v~ve~--~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-------~~FsaG~Dl~~  107 (143)
                      .++++.+++  ++   +|++||||||+++|+++.+|+.+|.+++++++.|+++|+|||+|.|       ++||+|+|+++
T Consensus        21 ~~~~i~~~~~~~~---~va~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~   97 (302)
T PRK08321         21 DFTDITYHRAVDQ---GTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRI   97 (302)
T ss_pred             CceeEEEEEecCC---CEEEEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhh
Confidence            467899988  54   8999999999999999999999999999999999999999999987       59999999997


Q ss_pred             hhhhh-------h-h--hh-HH--hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         108 MLNQT-------Y-A--AN-VK--TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       108 ~~~~~-------~-~--~~-~~--~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +....       . .  .. ..  .....++..+..+||||||+|||+|
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a  146 (302)
T PRK08321         98 RGRDGYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWA  146 (302)
T ss_pred             hccccccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCee
Confidence            53210       0 0  00 00  1112345678899999999999987

>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional

Probab=99.87  E-value=1.4e-21  Score=151.62  Aligned_cols=101  Identities=21%  Similarity=0.354  Sum_probs=82.9

Q ss_pred             ccEEEEE-ecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC--CCccCCCCcchhhhhhh-h
Q psy9280          39 ENILVDK-VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE--KAFAAGADIKEMLNQTY-A  114 (143)
Q Consensus        39 ~~v~ve~-~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g--~~FsaG~Dl~~~~~~~~-~  114 (143)
                      +.+.+++ ++   +|++|+||||+ .|+++.+|+++|.+++++++.|+++|+|||||.|  ++||+|+|++++..... .
T Consensus        11 ~~i~~~~~~~---~Va~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~~~~~   86 (278)
T PLN03214         11 PGVRVDRRPG---GIAVVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAPKTSA   86 (278)
T ss_pred             CceEEEEcCC---CEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhccccch
Confidence            4788887 44   89999999985 7999999999999999999999999999999987  79999999998753211 1


Q ss_pred             h---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .   .+......++.+|..+||||||+|||+|
T Consensus        87 ~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a  118 (278)
T PLN03214         87 ARYAEFWLTQTTFLVRLLRSRLATVCAIRGAC  118 (278)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCEEEEEcCcc
Confidence            1   1112234466789999999999999987

>PLN02267 enoyl-CoA hydratase/isomerase family protein

Probab=99.87  E-value=1e-21  Score=149.44  Aligned_cols=99  Identities=21%  Similarity=0.263  Sum_probs=80.5

Q ss_pred             EEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCee-EEEEEcCCCCccCCCCcchhhhhh--hh--h
Q psy9280          41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVA-AIVLTGNEKAFAAGADIKEMLNQT--YA--A  115 (143)
Q Consensus        41 v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr-~vVltg~g~~FsaG~Dl~~~~~~~--~~--~  115 (143)
                      +.+++++   +|++|+||||+ .|+++.+|+++|.+++++++.|++++ +||++|.|++||+|+|++++....  ..  .
T Consensus         2 ~~~~~~~---~v~~i~Lnrp~-~Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~~~~~~~~~   77 (239)
T PLN02267          2 CTLEKRG---NLFILTLTGDG-EHRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAAGSAPSRLH   77 (239)
T ss_pred             ceeEecC---CEEEEEeCCCC-cCcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhccccCHHHHH
Confidence            4566665   89999999998 49999999999999999999998876 666789999999999999875321  11  1


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....+.+++.++..+||||||+|||+|
T Consensus        78 ~~~~~~~~~~~~l~~~~kPvIAaV~G~a  105 (239)
T PLN02267         78 LMVAKLRPLVADLISLPMPTIAAVTGHA  105 (239)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEECCcc
Confidence            1123456677899999999999999997

>PRK06213 enoyl-CoA hydratase; Provisional

Probab=99.87  E-value=1.9e-21  Score=146.90  Aligned_cols=99  Identities=30%  Similarity=0.363  Sum_probs=82.0

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh-hH
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA-NV  117 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~-~~  117 (143)
                      +.+.+++++   +|++|+||||+ .|+++.+|+++|.+++++++  +++|+||++|.|++||+|+|++++....... ..
T Consensus         3 ~~i~~~~~~---~v~~itln~~~-~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~~~~~~~~   76 (229)
T PRK06213          3 ELVSYTLED---GVATITLDDGK-VNALSPAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSGAQAAIAL   76 (229)
T ss_pred             ceEEEEecC---CEEEEEeCCCC-CCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcchHhHHHH
Confidence            467888876   99999999985 79999999999999999998  4579999999999999999999876431111 11


Q ss_pred             HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         118 KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       118 ~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...+.+++.++..+|||+||+|||+|
T Consensus        77 ~~~~~~l~~~l~~~~kPvIAav~G~a  102 (229)
T PRK06213         77 LTAGSTLARRLLSHPKPVIVACTGHA  102 (229)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEEcCee
Confidence            23455677899999999999999987

>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

Probab=99.86  E-value=3.9e-21  Score=140.99  Aligned_cols=99  Identities=43%  Similarity=0.594  Sum_probs=87.3

Q ss_pred             EEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh----hH
Q psy9280          42 LVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA----NV  117 (143)
Q Consensus        42 ~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~----~~  117 (143)
                      .+++++   +|++|+||+|++.|+++.+|+++|.++++.++.|+++++|||+|.|+.||+|.|++++.......    ..
T Consensus         2 ~~~~~~---~i~~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~~~~~~~~   78 (195)
T cd06558           2 LVERDG---GVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGEEARAF   78 (195)
T ss_pred             EEEEEC---CEEEEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhcccccchhHHHH
Confidence            566665   89999999999899999999999999999999999999999999999999999999987655432    23


Q ss_pred             HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         118 KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       118 ~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...+.+++.++..+|||+||+|||+|
T Consensus        79 ~~~~~~~~~~i~~~~~p~Ia~v~G~a  104 (195)
T cd06558          79 IRELQELLRALLRLPKPVIAAVNGAA  104 (195)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEECCee
Confidence            35667788999999999999999986

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=99.85  E-value=6.8e-21  Score=163.76  Aligned_cols=101  Identities=26%  Similarity=0.401  Sum_probs=85.2

Q ss_pred             cEEEEE-ecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhh---hhh-
Q psy9280          40 NILVDK-VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ---TYA-  114 (143)
Q Consensus        40 ~v~ve~-~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~---~~~-  114 (143)
                      .+.++. ++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...   ... 
T Consensus         7 ~i~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~   83 (715)
T PRK11730          7 TLQVDWLED---GIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFAAPEEE   83 (715)
T ss_pred             eEEEEEcCC---CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhccCCHHH
Confidence            577775 44   8999999999999999999999999999999999999999999999999999999987642   111 


Q ss_pred             -hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 -ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 -~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       ..+...+.+++.++..+|||+||+|||+|
T Consensus        84 ~~~~~~~~~~~~~~i~~~~kPvIAav~G~a  113 (715)
T PRK11730         84 LSQWLHFANSIFNRLEDLPVPTVAAINGYA  113 (715)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCEEEEECCEe
Confidence             11223455667889999999999999987

>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

Probab=99.85  E-value=6e-21  Score=151.46  Aligned_cols=92  Identities=27%  Similarity=0.357  Sum_probs=77.4

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhh---hhh--hHHhHHHHHH
Q psy9280          52 VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQT---YAA--NVKTGLLEHW  125 (143)
Q Consensus        52 V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~---~~~--~~~~~~~~~~  125 (143)
                      +++|+||||+++|+++.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....   ...  .....+.+++
T Consensus        38 ~A~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~~~~~~~~~~~~~~~~l~  117 (360)
T TIGR03200        38 NAWIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMV  117 (360)
T ss_pred             EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcccChhHHHHHHHHHHHHH
Confidence            556999999999999999999999999999999999999999998 6999999999876421   111  1113345667


Q ss_pred             HHHhcCCCcEEEEEecCC
Q psy9280         126 DNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       126 ~~l~~~~kP~IAav~G~a  143 (143)
                      .++..+||||||+|||+|
T Consensus       118 ~~i~~~pKPVIAAVnG~A  135 (360)
T TIGR03200       118 SAILGCDKPVICRVNGMR  135 (360)
T ss_pred             HHHHhCCCCEEEEECCEe
Confidence            889999999999999986

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=99.83  E-value=3.8e-20  Score=159.07  Aligned_cols=102  Identities=25%  Similarity=0.388  Sum_probs=85.9

Q ss_pred             cEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhh---hhhh-
Q psy9280          40 NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ---TYAA-  115 (143)
Q Consensus        40 ~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~---~~~~-  115 (143)
                      .+.++..  +++|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++...   .... 
T Consensus         7 ~i~~~~~--~~gva~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~   84 (714)
T TIGR02437         7 TIQVTAL--EDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFALPDAEL   84 (714)
T ss_pred             eEEEEEc--cCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhcccCCHHHH
Confidence            5777753  238999999999999999999999999999999999999999999999999999999998642   1111 


Q ss_pred             -hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 -NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 -~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       .+......++.+|..+|||+||+|||+|
T Consensus        85 ~~~~~~~~~~~~~i~~~pkPvIAai~G~a  113 (714)
T TIGR02437        85 IQWLLFANSIFNKLEDLPVPTVAAINGIA  113 (714)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence             1223456678899999999999999987

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=99.83  E-value=4.5e-20  Score=154.05  Aligned_cols=107  Identities=22%  Similarity=0.243  Sum_probs=85.6

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHh-cCCCeeEEEEEcC-CCCccC
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLNRPK----------SLNALCDALVSEVAAAVQQFD-QDSSVAAIVLTGN-EKAFAA  101 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln~p~----------~~Nal~~~~~~el~~~l~~~~-~d~~vr~vVltg~-g~~Fsa  101 (143)
                      +.+.|+++.+++++   +|++|+||||+          +.|+++.+|+++|.+++++++ .|+++|+|||||. |++||+
T Consensus         6 ~~~~~~~v~~~~~g---~Va~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~Fca   82 (546)
T TIGR03222         6 EPSQYRHWKLTFDG---PVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCS   82 (546)
T ss_pred             CCCCCceEEEEeeC---CEEEEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcC
Confidence            44668889999887   89999999975          899999999999999999999 7899999999986 689999


Q ss_pred             CCCcchhhhhhhh--hhHHh----HHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         102 GADIKEMLNQTYA--ANVKT----GLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       102 G~Dl~~~~~~~~~--~~~~~----~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      |+|++++......  .....    ....+...+..+|||+||+|||+|
T Consensus        83 G~DL~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~a  130 (546)
T TIGR03222        83 GANIFMLGLSTHAWKVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGTC  130 (546)
T ss_pred             CcCHHHHhccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence            9999987532111  11101    112234567789999999999986

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=99.83  E-value=4.8e-20  Score=158.85  Aligned_cols=106  Identities=22%  Similarity=0.419  Sum_probs=87.9

Q ss_pred             CCCcccEEEEEecCCCcEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCeeEE-EEEcCCCCccCCCCcchhhhhh
Q psy9280          35 TVKFENILVDKVGKNKNVGLVQLNRPK-SLNALCDALVSEVAAAVQQFDQDSSVAAI-VLTGNEKAFAAGADIKEMLNQT  112 (143)
Q Consensus        35 ~~~~~~v~ve~~~~~~~V~~I~ln~p~-~~Nal~~~~~~el~~~l~~~~~d~~vr~v-Vltg~g~~FsaG~Dl~~~~~~~  112 (143)
                      .+.++.+.+++++   +|++|+||+|+ +.|+|+.+|+.+|.+++++++.|+++|+| |++|.|++||+|+|++++....
T Consensus         9 ~~~~~~~~~~~~~---gVa~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~~   85 (737)
T TIGR02441         9 LMARTHRHYEVKG---DVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAACK   85 (737)
T ss_pred             CCCCCeEEEEEEC---CEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhccC
Confidence            3556778888876   99999999998 58999999999999999999999999976 4589999999999999986421


Q ss_pred             h-hh--hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 Y-AA--NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~-~~--~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      . ..  .+......++.++..+||||||+|||+|
T Consensus        86 ~~~~~~~~~~~~~~l~~~i~~~~kPvIAav~G~a  119 (737)
T TIGR02441        86 TAQEVTQLSQEGQEMFERIEKSQKPIVAAISGSC  119 (737)
T ss_pred             ChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence            1 11  1123455678899999999999999987

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=99.83  E-value=9.3e-20  Score=152.42  Aligned_cols=115  Identities=10%  Similarity=0.141  Sum_probs=88.3

Q ss_pred             hhhhcc-cCCCcccEEEEEecCCCcEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHhc-CCCeeEEEE
Q psy9280          28 YIIKYM-STVKFENILVDKVGKNKNVGLVQLNRPKSL-------------NALCDALVSEVAAAVQQFDQ-DSSVAAIVL   92 (143)
Q Consensus        28 ~~r~~~-~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~-------------Nal~~~~~~el~~~l~~~~~-d~~vr~vVl   92 (143)
                      +-|..- .+-.|+++.++.+- +++|++||||||+++             |+|+.+|+++|.+++++++. |+++|+|||
T Consensus       248 ~~~~~~~~~~~~~~~~v~~~~-~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVl  326 (550)
T PRK08184        248 LERTIDADGLRYRHVDVEIDR-AARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVL  326 (550)
T ss_pred             ccccccCCceeeEEEEEEEEc-cCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence            345444 55667777777652 348999999999988             68999999999999999986 799999999


Q ss_pred             EcCC-CCccCCCCcchhhhhhh--hhhHHhHHHHHHHHHhcCCCcEEEEEe-cCC
Q psy9280          93 TGNE-KAFAAGADIKEMLNQTY--AANVKTGLLEHWDNITKAKKPVIAAVN-GYA  143 (143)
Q Consensus        93 tg~g-~~FsaG~Dl~~~~~~~~--~~~~~~~~~~~~~~l~~~~kP~IAav~-G~a  143 (143)
                      ||.| ++||+|+|++.+.....  .......+...+.+|..+||||||+|| |+|
T Consensus       327 tg~G~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a  381 (550)
T PRK08184        327 KTEGDAAAVLAADATLLAHKDHWLVRETRGYLRRTLKRLDVTSRSLFALIEPGSC  381 (550)
T ss_pred             EcCCCCcEEeCCChhhhcccchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCce
Confidence            9998 49999999874321111  011113344567899999999999997 987

>KOG1679|consensus

Probab=99.82  E-value=6.5e-20  Score=135.55  Aligned_cols=106  Identities=27%  Similarity=0.506  Sum_probs=92.8

Q ss_pred             cccEEEEE-ecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEc-CCCCccCCCCcchhhhhhhhh
Q psy9280          38 FENILVDK-VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        38 ~~~v~ve~-~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg-~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      -..+.+++ .+++.||.+|-||||.+.|+++..|+++|.++++++..|+.+|+|+|.+ .++.||+|+||++...++..+
T Consensus        26 ~~Ev~v~~L~g~~~GItvl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~Ms~~E  105 (291)
T KOG1679|consen   26 ANEVFVRRLTGKDEGITILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTMSPSE  105 (291)
T ss_pred             CceeeeeeccCCCCCeEEEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcCCHHH
Confidence            45677777 5567799999999999999999999999999999999999999999976 589999999999998877655


Q ss_pred             h--HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 N--VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~--~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .  +-..+..++..++++|.|+||||+|.|
T Consensus       106 v~~fV~~lR~~~~dIe~Lp~P~IAAidG~A  135 (291)
T KOG1679|consen  106 VTRFVNGLRGLFNDIERLPQPVIAAIDGAA  135 (291)
T ss_pred             HHHHHHHHHHHHHHHHhCCccceehhcchh
Confidence            4  225666778999999999999999975

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=99.82  E-value=9.5e-20  Score=152.12  Aligned_cols=113  Identities=14%  Similarity=0.125  Sum_probs=86.8

Q ss_pred             hhcc-cCCCcccEEEEEecCCCcEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHh-cCCCeeEEEEEc
Q psy9280          30 IKYM-STVKFENILVDKVGKNKNVGLVQLNRPKSL-------------NALCDALVSEVAAAVQQFD-QDSSVAAIVLTG   94 (143)
Q Consensus        30 r~~~-~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~-------------Nal~~~~~~el~~~l~~~~-~d~~vr~vVltg   94 (143)
                      |.+- -+..|.+|.++.+. +++|++||||||++.             |+|+.+|+.+|.+++.+++ +|+++|+|||||
T Consensus       246 ~~~~~~~~~~~~~~v~~~~-~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g  324 (546)
T TIGR03222       246 RTIDEDGVRYPTVDVAIDR-AARTATITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRT  324 (546)
T ss_pred             hhcccCCcceeeEEEEEec-cCCEEEEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEc
Confidence            4443 44556676665542 348999999999999             9999999999999999998 459999999999


Q ss_pred             CCCC-ccCCCCcchhhhhhhh--hhHHhHHHHHHHHHhcCCCcEEEEE-ecCC
Q psy9280          95 NEKA-FAAGADIKEMLNQTYA--ANVKTGLLEHWDNITKAKKPVIAAV-NGYA  143 (143)
Q Consensus        95 ~g~~-FsaG~Dl~~~~~~~~~--~~~~~~~~~~~~~l~~~~kP~IAav-~G~a  143 (143)
                      .|+. ||+|+|++........  ........+.+.+|..+|||+||+| ||+|
T Consensus       325 ~G~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a  377 (546)
T TIGR03222       325 QGDAELVLAADALLEAHKDHWFVRETIGYLRRTLARLDVSSRSLFALIEPGSC  377 (546)
T ss_pred             CCCCceecCcCccccccccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCCeE
Confidence            9987 9999999843221110  1111233457789999999999999 8986

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=99.82  E-value=1.6e-19  Score=154.93  Aligned_cols=94  Identities=23%  Similarity=0.423  Sum_probs=79.5

Q ss_pred             CcEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEE-EcCCCCccCCCCcchhhhhhhh---hhHHhHHHHH
Q psy9280          50 KNVGLVQLNRP-KSLNALCDALVSEVAAAVQQFDQDSSVAAIVL-TGNEKAFAAGADIKEMLNQTYA---ANVKTGLLEH  124 (143)
Q Consensus        50 ~~V~~I~ln~p-~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVl-tg~g~~FsaG~Dl~~~~~~~~~---~~~~~~~~~~  124 (143)
                      ++|++|+|||| +++|+|+.+|+++|.+++++++.|+++|+||| +|.|++||+|+|++++......   ......+..+
T Consensus         9 ~~Va~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~   88 (699)
T TIGR02440         9 DGIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAACQTAGEAKALAQQGQVL   88 (699)
T ss_pred             CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhccCChhHHHHHHHHHHHH
Confidence            48999999999 68999999999999999999999999999997 6789999999999998542111   1112345667


Q ss_pred             HHHHhcCCCcEEEEEecCC
Q psy9280         125 WDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       125 ~~~l~~~~kP~IAav~G~a  143 (143)
                      +.++..+||||||+|||+|
T Consensus        89 ~~~l~~~~kPvIAaVnG~a  107 (699)
T TIGR02440        89 FAELEALPIPVVAAIHGAC  107 (699)
T ss_pred             HHHHHhCCCCEEEEECCEe
Confidence            7899999999999999987

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=99.81  E-value=2e-19  Score=154.56  Aligned_cols=102  Identities=22%  Similarity=0.383  Sum_probs=84.0

Q ss_pred             cEEEEEecCCCcEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC-CCCccCCCCcchhhhhhhh---
Q psy9280          40 NILVDKVGKNKNVGLVQLNRP-KSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKEMLNQTYA---  114 (143)
Q Consensus        40 ~v~ve~~~~~~~V~~I~ln~p-~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~-g~~FsaG~Dl~~~~~~~~~---  114 (143)
                      .+.++++  +++|++|+|||| ++.|+++.+|+++|.+++++++.|+++|+|||+|. |++||+|+|++++......   
T Consensus         6 ~~~~~~~--~~~va~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~~~~~~   83 (708)
T PRK11154          6 AFTLNVR--EDNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACKTAQEA   83 (708)
T ss_pred             eEEEEEc--CCCEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccCCHHHH
Confidence            4667773  238999999999 58999999999999999999999999999999985 5899999999987542211   


Q ss_pred             hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..+...+..++.+|..+||||||+|||+|
T Consensus        84 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~a  112 (708)
T PRK11154         84 EALARQGQQLFAEIEALPIPVVAAIHGAC  112 (708)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            11223455678899999999999999987

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=99.81  E-value=3.2e-19  Score=149.25  Aligned_cols=106  Identities=21%  Similarity=0.223  Sum_probs=84.4

Q ss_pred             CCCcccEEEEEecCCCcEEEEEEcCC-------C---CCCCCCHHHHHHHHHHHHHHh-cCCCeeEEEEEcC-CCCccCC
Q psy9280          35 TVKFENILVDKVGKNKNVGLVQLNRP-------K---SLNALCDALVSEVAAAVQQFD-QDSSVAAIVLTGN-EKAFAAG  102 (143)
Q Consensus        35 ~~~~~~v~ve~~~~~~~V~~I~ln~p-------~---~~Nal~~~~~~el~~~l~~~~-~d~~vr~vVltg~-g~~FsaG  102 (143)
                      .+.++++.+++++   +|++|+||||       +   +.|+++.+|+.+|.+++++++ .++++|+|||+|. |++||+|
T Consensus        11 ~~~~~~~~~e~~~---~Va~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG   87 (550)
T PRK08184         11 PSQYRHWKLSFDG---PVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSG   87 (550)
T ss_pred             CCCCceEEEEeeC---CEEEEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCc
Confidence            3668899999887   9999999965       3   899999999999999999999 7899999999996 5899999


Q ss_pred             CCcchhhhhhhhhh--HHh---HH-HHHHHHHhcCCCcEEEEEecCC
Q psy9280         103 ADIKEMLNQTYAAN--VKT---GL-LEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       103 ~Dl~~~~~~~~~~~--~~~---~~-~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +|++++........  ...   .. ..+...+..+||||||+|||+|
T Consensus        88 ~DL~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~a  134 (550)
T PRK08184         88 ANIFMLGGSSHAWKVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGTC  134 (550)
T ss_pred             cCHHhHhccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence            99998754221110  101   11 1234567889999999999987

>KOG0016|consensus

Probab=99.78  E-value=2e-18  Score=130.31  Aligned_cols=107  Identities=26%  Similarity=0.356  Sum_probs=90.8

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLN-RPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT  112 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln-~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~  112 (143)
                      +.++|..+.+++++   ++++|.+| ||++.|+++.+++.++.++|++...|+++..++++|.|.+||+|.|+..+....
T Consensus         2 ~~~~~~~~vv~~~~---g~~~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~   78 (266)
T KOG0016|consen    2 SAMRYREIVVTREN---GPFFIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKAL   78 (266)
T ss_pred             CcccccceEEEecC---CcEEEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcC
Confidence            35678899999987   99999999 999999999999999999999999999998999999999999999999987643


Q ss_pred             hhhhHH---------hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 YAANVK---------TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~~~~~~---------~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..+...         ..+......+..+|||+||.|||+|
T Consensus        79 ~~d~~~~~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPA  118 (266)
T KOG0016|consen   79 DDDANEESDKASKFVKNVSCFVNTFINFPKPLVALVNGPA  118 (266)
T ss_pred             CCcccccchhhHHHHHHHHHHHHHHhcCCCCEEEEecCCc
Confidence            322111         1122256889999999999999997

>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]

Probab=99.75  E-value=4e-18  Score=126.23  Aligned_cols=108  Identities=32%  Similarity=0.428  Sum_probs=87.1

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC---CCCccCCCCcchhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN---EKAFAAGADIKEMLN  110 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~---g~~FsaG~Dl~~~~~  110 (143)
                      ....|+.|.+++..  ++|+.|++|||+++|++.+..+.||.++|..+..|+++.+|||||.   ++.||+|+|-+....
T Consensus        13 ~~~~y~dI~Y~~~~--~giakItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~   90 (282)
T COG0447          13 GFEGYEDITYEKSV--DGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGD   90 (282)
T ss_pred             hcCCcceeEEeecc--CceEEEEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceeccc
Confidence            44578999999972  3999999999999999999999999999999999999999999973   488999999877554


Q ss_pred             h-h--hh-hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         111 Q-T--YA-ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       111 ~-~--~~-~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      . .  .+ ..-.-....+-+.|..+||||||.|+|+|
T Consensus        91 ~~gY~~d~~~~rLnvLdlQrlIR~~PKpViA~V~G~A  127 (282)
T COG0447          91 SGGYVDDDGIPRLNVLDLQRLIRTMPKPVIAMVAGYA  127 (282)
T ss_pred             CCCccCCccCcccchhhHHHHHHhCCcceEEEEeeEe
Confidence            2 1  11 11112334445678899999999999975

>KOG1682|consensus

Probab=99.71  E-value=5.1e-17  Score=119.52  Aligned_cols=111  Identities=27%  Similarity=0.330  Sum_probs=88.0

Q ss_pred             hhhcccCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchh
Q psy9280          29 IIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM  108 (143)
Q Consensus        29 ~r~~~~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~  108 (143)
                      .|-++..+.+. ..++.++   +|-.|+|++|+|+|.++.+|+.+|.+.+....+..++|+|||+..|+.||+|.||+++
T Consensus        23 aRf~s~~p~~~-g~~~~~~---gvR~i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKEL   98 (287)
T KOG1682|consen   23 ARFTSNGPSDL-GLVKEHN---GVREITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKEL   98 (287)
T ss_pred             HHHhhcCcccc-ccccccc---ceeeeeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHh
Confidence            34444444333 3344333   8999999999999999999999999999999888899999999999999999999999


Q ss_pred             hhhhhhhhHHh---HHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         109 LNQTYAANVKT---GLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       109 ~~~~~~~~~~~---~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ......+.-.+   ..-+++.-|.++|+|+|+.|||.|
T Consensus        99 t~e~g~d~haevFqtc~dvmn~Irn~pVPVia~VNG~A  136 (287)
T KOG1682|consen   99 TNEPGSDIHAEVFQTCTDVMNDIRNLPVPVIAKVNGYA  136 (287)
T ss_pred             hcCccchHHHHHHHHHHHHHHHHhcCCCceEEEecchh
Confidence            87653332222   233456888999999999999975

>KOG1684|consensus

Probab=99.66  E-value=6.4e-16  Score=121.49  Aligned_cols=104  Identities=28%  Similarity=0.402  Sum_probs=84.9

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC-CCCccCCCCcchhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~-g~~FsaG~Dl~~~~~~~~~  114 (143)
                      ....+|.++..+   ....|+||||+++|+++.+|...+.-.|.+++.++.+++||+-|. |++||+|+|++.......+
T Consensus        35 ~~~~~VL~e~~~---~~r~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~d  111 (401)
T KOG1684|consen   35 DSKDQVLVEGKG---CARVITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIKD  111 (401)
T ss_pred             ccCCceEEecCC---ceeEEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhhc
Confidence            334678888877   899999999999999999999999999999999999999999885 7999999999865433221


Q ss_pred             hh------HHhHHHHHHHHHhcCCCcEEEEEecC
Q psy9280         115 AN------VKTGLLEHWDNITKAKKPVIAAVNGY  142 (143)
Q Consensus       115 ~~------~~~~~~~~~~~l~~~~kP~IAav~G~  142 (143)
                      ..      +-.....+...+....||.||.++|.
T Consensus       112 ~~~~~~~~fF~~eYsl~~~igtY~KP~ValmdGI  145 (401)
T KOG1684|consen  112 KETPEVKKFFTEEYSLNHLIGTYLKPYVALMDGI  145 (401)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcCceEEEeece
Confidence            11      11233344578899999999999996

>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=98.83  E-value=1.6e-08  Score=75.56  Aligned_cols=78  Identities=23%  Similarity=0.258  Sum_probs=58.6

Q ss_pred             EEEEEEcCC--CCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHh
Q psy9280          52 VGLVQLNRP--KSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNIT  129 (143)
Q Consensus        52 V~~I~ln~p--~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~  129 (143)
                      |++|.++.+  +..+..+.-.+++|.++|+++..|+++++|||+    .||.|+|+..+.          .+.+.+..+.
T Consensus         2 i~v~~~~g~i~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~----------~~~~~l~~~~   67 (211)
T cd07019           2 IGVVFANGAIVDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASE----------VIRAELAAAR   67 (211)
T ss_pred             EEEEEEEEEEeCCCCCCCccCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHH----------HHHHHHHHHH
Confidence            555555532  112333455689999999999999999999998    699999997752          2234466778


Q ss_pred             cCCCcEEEEEecCC
Q psy9280         130 KAKKPVIAAVNGYA  143 (143)
Q Consensus       130 ~~~kP~IAav~G~a  143 (143)
                      .++||+||+++|.|
T Consensus        68 ~~~kpVia~v~g~a   81 (211)
T cd07019          68 AAGKPVVVSAGGAA   81 (211)
T ss_pred             hCCCCEEEEECCee
Confidence            89999999999985

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te

>cd07014 S49_SppA Signal peptide peptidase A

Probab=98.67  E-value=8.4e-08  Score=69.75  Aligned_cols=61  Identities=26%  Similarity=0.269  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280          69 ALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus        69 ~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      -.+++|.++++++++|+++|+|||++    ||.|.|+...          ..+.+.+..+..++||+||+++|.|
T Consensus        22 ~~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~----------~~~~~~i~~~~~~~kpVia~v~G~a   82 (177)
T cd07014          22 VSGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTAS----------EVIRAELAAARAAGKPVVASGGGNA   82 (177)
T ss_pred             cCHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHH----------HHHHHHHHHHHhCCCCEEEEECCch
Confidence            35789999999999999999999997    6889887642          1234456778889999999999986

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p

>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=98.44  E-value=7.4e-07  Score=66.35  Aligned_cols=76  Identities=21%  Similarity=0.300  Sum_probs=57.1

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcC
Q psy9280          52 VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKA  131 (143)
Q Consensus        52 V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~  131 (143)
                      |++|.++.+=...  +..++.+|.++|++++.|+++++|++++    +|.|+|+...          ..+.+.+..+..+
T Consensus         2 v~vi~i~g~i~~~--~~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~----------~~i~~~i~~~~~~   65 (208)
T cd07023           2 IAVIDIEGTISDG--GGIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVAS----------EEIYREIRRLRKA   65 (208)
T ss_pred             EEEEEEEEEEcCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHH----------HHHHHHHHHHHhc
Confidence            5566665321000  3678999999999999999999999988    5788888652          1234456778888


Q ss_pred             CCcEEEEEecCC
Q psy9280         132 KKPVIAAVNGYA  143 (143)
Q Consensus       132 ~kP~IAav~G~a  143 (143)
                      +||+||+++|.|
T Consensus        66 ~kpvia~v~g~~   77 (208)
T cd07023          66 KKPVVASMGDVA   77 (208)
T ss_pred             CCcEEEEECCcc
Confidence            999999999976

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad

>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad

Probab=98.42  E-value=1.7e-06  Score=64.74  Aligned_cols=70  Identities=30%  Similarity=0.297  Sum_probs=50.2

Q ss_pred             CCCCCCC-CCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEE
Q psy9280          59 RPKSLNA-LCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIA  137 (143)
Q Consensus        59 ~p~~~Na-l~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IA  137 (143)
                      ++...|+ ++..++.+|.++|++++.|+++++|||+.    +|.|+++...          ..+.+.+..+.. +||+||
T Consensus        14 ~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~----------~~l~~~l~~~~~-~KpViA   78 (214)
T cd07022          14 RGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI----DSPGGEVAGV----------FELADAIRAARA-GKPIVA   78 (214)
T ss_pred             CCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHH----------HHHHHHHHHHhc-CCCEEE
Confidence            4444454 45689999999999999999999999975    5566554331          123344444445 699999


Q ss_pred             EEecCC
Q psy9280         138 AVNGYA  143 (143)
Q Consensus       138 av~G~a  143 (143)
                      +++|.|
T Consensus        79 ~v~g~a   84 (214)
T cd07022          79 FVNGLA   84 (214)
T ss_pred             EECCch
Confidence            999975

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.

>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease

Probab=97.89  E-value=3e-05  Score=55.22  Aligned_cols=61  Identities=33%  Similarity=0.424  Sum_probs=47.6

Q ss_pred             CCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280          66 LCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus        66 l~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ++..++++|.+.|+.++.|+.+++|+|..    .|.|+|+..             ...+...|..++||+|+.++|.|
T Consensus         8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~----~s~Gg~~~~-------------~~~i~~~l~~~~kpvva~~~g~~   68 (161)
T cd00394           8 IEDVSADQLAAQIRFAEADNSVKAIVLEV----NTPGGRVDA-------------GMNIVDALQASRKPVIAYVGGQA   68 (161)
T ss_pred             EccchHHHHHHHHHHHHhCCCCceEEEEE----ECCCcCHHH-------------HHHHHHHHHHhCCCEEEEECChh
Confidence            45578899999999999999999999975    466665532             23345567778899999999875

Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec

>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad

Probab=97.88  E-value=3.5e-05  Score=58.02  Aligned_cols=64  Identities=22%  Similarity=0.340  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecC
Q psy9280          65 ALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGY  142 (143)
Q Consensus        65 al~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~  142 (143)
                      .-+...+.+|.+.|+++..|+.+++|||+..+..| ++.++.++             .+.+..+...+||+||.++|.
T Consensus        25 ~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el-------------~~~i~~~~~~~kpVia~~~~~   88 (222)
T cd07018          25 ESSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEEL-------------RQALERFRASGKPVIAYADGY   88 (222)
T ss_pred             CcCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHH-------------HHHHHHHHHhCCeEEEEeCCC
Confidence            34567789999999999999999999999877666 55555554             344455666799999999874

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys

>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type

Probab=97.86  E-value=5.1e-05  Score=56.53  Aligned_cols=69  Identities=22%  Similarity=0.428  Sum_probs=48.2

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcC
Q psy9280          52 VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKA  131 (143)
Q Consensus        52 V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~  131 (143)
                      |++|.++.+=     + ...++|.++|+++..|+++++|||+..    |.|+++...             ..+...|.++
T Consensus         2 v~vi~i~g~i-----~-~s~~~l~~~l~~a~~d~~i~~vvl~~~----s~Gg~~~~~-------------~~l~~~i~~~   58 (207)
T TIGR00706         2 IAILPVSGAI-----A-VSPEDFDKKIKRIKDDKSIKALLLRIN----SPGGTVVAS-------------EEIYEKLKKL   58 (207)
T ss_pred             EEEEEEEEEE-----e-cCHHHHHHHHHHHhhCCCccEEEEEec----CCCCCHHHH-------------HHHHHHHHHh
Confidence            5566665431     1 235689999999999999999999873    667666532             2234455555


Q ss_pred             C--CcEEEEEecCC
Q psy9280         132 K--KPVIAAVNGYA  143 (143)
Q Consensus       132 ~--kP~IAav~G~a  143 (143)
                      +  ||+||.++|.|
T Consensus        59 ~~~kpvia~v~g~a   72 (207)
T TIGR00706        59 KAKKPVVASMGGVA   72 (207)
T ss_pred             cCCCCEEEEECCcc
Confidence            5  99999999975

The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.

>KOG1683|consensus

Probab=97.36  E-value=8.9e-05  Score=59.39  Aligned_cols=92  Identities=15%  Similarity=0.070  Sum_probs=78.0

Q ss_pred             CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC-CCCccCCCCcchhhhhhhh--hhHHhHHHHHHH
Q psy9280          50 KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKEMLNQTYA--ANVKTGLLEHWD  126 (143)
Q Consensus        50 ~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~-g~~FsaG~Dl~~~~~~~~~--~~~~~~~~~~~~  126 (143)
                      .++..+.|+ |+ .|..|.++.++|..-+++++.+..+++..+|+- -+.|++|.|..+.......  ...+-++++.+.
T Consensus        65 ~~~~~~dmv-ie-av~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg~h~fspa~~m~LlEii~  142 (380)
T KOG1683|consen   65 TGFANADMV-IE-AVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVGMHFFSPAHWMQLLEIIL  142 (380)
T ss_pred             cccccccee-cc-chhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhccccccCHHHHHHHHHHHH
Confidence            378888888 66 699999999999999999999999999999885 5899999999998765432  223467889999


Q ss_pred             HHhcCCCcEEEEEecCC
Q psy9280         127 NITKAKKPVIAAVNGYA  143 (143)
Q Consensus       127 ~l~~~~kP~IAav~G~a  143 (143)
                      ..+.++.|+.+|+||++
T Consensus       143 ~~~tS~~~iA~Ain~~~  159 (380)
T KOG1683|consen  143 ALYTSKLTIATAINGGS  159 (380)
T ss_pred             hcCCCchHHHHHHhccc
Confidence            99999999999999874

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=97.18  E-value=0.0016  Score=55.70  Aligned_cols=78  Identities=24%  Similarity=0.318  Sum_probs=54.2

Q ss_pred             CCcEEEEEEcCCC--CCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC---CCCccCCCCcchhhhhhhhhhHHhHHHH
Q psy9280          49 NKNVGLVQLNRPK--SLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN---EKAFAAGADIKEMLNQTYAANVKTGLLE  123 (143)
Q Consensus        49 ~~~V~~I~ln~p~--~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~---g~~FsaG~Dl~~~~~~~~~~~~~~~~~~  123 (143)
                      ++.|++|.++.+=  ..+..+....+.+.+.++++..|+++++|||+-+   |..|++                 +.+.+
T Consensus       307 ~~~vavI~~~G~I~~~~~~~~~~~~~~~~~~l~~a~~D~~VkaIVLrinSpGGs~~as-----------------e~i~~  369 (584)
T TIGR00705       307 QDKIGIVHLEGPIADGRDTEGNTGGDTVAALLRVARSDPDIKAVVLRINSPGGSVFAS-----------------EIIRR  369 (584)
T ss_pred             CCeEEEEEEEEEEcCCCCcccccCHHHHHHHHHHHhhCCCceEEEEEecCCCCCHHHH-----------------HHHHH
Confidence            3489999998642  2344444456678889999999999999999842   233321                 12234


Q ss_pred             HHHHHhcCCCcEEEEEecCC
Q psy9280         124 HWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       124 ~~~~l~~~~kP~IAav~G~a  143 (143)
                      .+.++...+||+|+.++|.|
T Consensus       370 ~i~~~~~~gKPVva~~~g~a  389 (584)
T TIGR00705       370 ELARAQARGKPVIVSMGAMA  389 (584)
T ss_pred             HHHHHHhCCCcEEEEECCcc
Confidence            45556777899999999976

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=96.96  E-value=0.003  Score=46.27  Aligned_cols=67  Identities=18%  Similarity=0.224  Sum_probs=44.9

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEE-cCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcC
Q psy9280          53 GLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT-GNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKA  131 (143)
Q Consensus        53 ~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVlt-g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~  131 (143)
                      ++|+++.     .++..+...+.+.++.++.++ ++.|+|. ..++     +++..             ...++..|..+
T Consensus         2 ~vv~i~g-----~I~~~~~~~l~~~l~~a~~~~-~~~vvl~InSpG-----G~v~~-------------~~~i~~~l~~~   57 (187)
T cd07020           2 YVLEING-----AITPATADYLERAIDQAEEGG-ADALIIELDTPG-----GLLDS-------------TREIVQAILAS   57 (187)
T ss_pred             EEEEEee-----EEChHHHHHHHHHHHHHHhCC-CCEEEEEEECCC-----CCHHH-------------HHHHHHHHHhC
Confidence            4566653     256677788999999998665 6777775 4322     12211             12445667789


Q ss_pred             CCcEEEEEe---cCC
Q psy9280         132 KKPVIAAVN---GYA  143 (143)
Q Consensus       132 ~kP~IAav~---G~a  143 (143)
                      |||+|++|+   |+|
T Consensus        58 ~kPvia~v~~~~G~A   72 (187)
T cd07020          58 PVPVVVYVYPSGARA   72 (187)
T ss_pred             CCCEEEEEecCCCCc
Confidence            999999999   886

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c

>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=95.72  E-value=0.047  Score=39.85  Aligned_cols=58  Identities=28%  Similarity=0.294  Sum_probs=41.3

Q ss_pred             CCHHHHHHHHHHHHHHhcCCCeeEEEEE--cCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280          66 LCDALVSEVAAAVQQFDQDSSVAAIVLT--GNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus        66 l~~~~~~el~~~l~~~~~d~~vr~vVlt--g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ++....+.+.++|+++++++ +..|++.  ..|+      ++             ......+..|..+++|+|+.|+|.|
T Consensus        10 I~~~~~~~l~~~l~~a~~~~-~~~ivl~inspGG------~v-------------~~~~~I~~~l~~~~~pvva~V~g~A   69 (178)
T cd07021          10 IDPGLAAFVERALKEAKEEG-ADAVVLDIDTPGG------RV-------------DSALEIVDLILNSPIPTIAYVNDRA   69 (178)
T ss_pred             ECHHHHHHHHHHHHHHHhCC-CCeEEEEEECcCC------CH-------------HHHHHHHHHHHhCCCCEEEEECCch
Confidence            55677788999999998776 6777764  2221      11             1234556778889999999999976

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall

>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=94.70  E-value=0.054  Score=38.43  Aligned_cols=55  Identities=18%  Similarity=0.301  Sum_probs=36.9

Q ss_pred             HHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280          69 ALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus        69 ~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...+++.+.|+.++.++.+ .+.|.+.|+...+                   ...+++.|..+++|+|+.++|.|
T Consensus        15 ~~~~~~~~~l~~~~~~~~i-~l~inspGG~~~~-------------------~~~i~~~i~~~~~pvi~~v~g~a   69 (160)
T cd07016          15 VTAKEFKDALDALGDDSDI-TVRINSPGGDVFA-------------------GLAIYNALKRHKGKVTVKIDGLA   69 (160)
T ss_pred             cCHHHHHHHHHhccCCCCE-EEEEECCCCCHHH-------------------HHHHHHHHHhcCCCEEEEEcchH
Confidence            4677888888888877443 3444444432211                   13456677888999999999976

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a

>PRK10949 protease 4; Provisional

Probab=93.31  E-value=1.1  Score=38.88  Aligned_cols=77  Identities=23%  Similarity=0.305  Sum_probs=49.5

Q ss_pred             CcEEEEEEcCC-----CCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHH
Q psy9280          50 KNVGLVQLNRP-----KSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEH  124 (143)
Q Consensus        50 ~~V~~I~ln~p-----~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~  124 (143)
                      +.|++|.++..     .....++.   +.+.+.|+++..|+++++|||+=+.    .|+.      ....    +.+.+.
T Consensus       326 ~~Iavi~~~G~I~~g~~~~g~~~~---~~~~~~l~~a~~D~~vkaVvLrInS----pGGs------~~as----e~i~~~  388 (618)
T PRK10949        326 GSIAVIFANGAIMDGEETPGNVGG---DTTAAQIRDARLDPKVKAIVLRVNS----PGGS------VTAS----EVIRAE  388 (618)
T ss_pred             CeEEEEEEEEEEcCCCCcCCCcCH---HHHHHHHHHHHhCCCCcEEEEEecC----CCCc------HHHH----HHHHHH
Confidence            47999888731     12234444   4678888899999999999997421    1110      0111    344555


Q ss_pred             HHHHhcCCCcEEEEEecCC
Q psy9280         125 WDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       125 ~~~l~~~~kP~IAav~G~a  143 (143)
                      +.++....||+||.+.|.|
T Consensus       389 i~~~r~~gKPVvas~~~~a  407 (618)
T PRK10949        389 LAAARAAGKPVVVSMGGMA  407 (618)
T ss_pred             HHHHHhcCCcEEEEECCCC
Confidence            5666677899999987764

>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3

Probab=93.24  E-value=0.25  Score=38.96  Aligned_cols=59  Identities=17%  Similarity=0.288  Sum_probs=38.4

Q ss_pred             CCHHHHHHHHHHHHHHhcCC---CeeEEEE-EcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEE
Q psy9280          66 LCDALVSEVAAAVQQFDQDS---SVAAIVL-TGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV  139 (143)
Q Consensus        66 l~~~~~~el~~~l~~~~~d~---~vr~vVl-tg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav  139 (143)
                      -+..--.++.+++..+....   .+-+||| +|+|       .+.++....+        ..+.+++..+|.|||++|
T Consensus        52 QG~~A~~~I~~al~~~~~~~~~~~~Dviii~RGGG-------s~eDL~~FN~--------e~varai~~~~~PvisaI  114 (319)
T PF02601_consen   52 QGEGAAASIVSALRKANEMGQADDFDVIIIIRGGG-------SIEDLWAFND--------EEVARAIAASPIPVISAI  114 (319)
T ss_pred             cccchHHHHHHHHHHHHhccccccccEEEEecCCC-------ChHHhcccCh--------HHHHHHHHhCCCCEEEec
Confidence            34456678888888887654   5667777 4544       2233222211        244678999999999997

1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity

>TIGR00237 xseA exodeoxyribonuclease VII, large subunit

Probab=92.60  E-value=0.33  Score=40.24  Aligned_cols=61  Identities=11%  Similarity=0.203  Sum_probs=39.9

Q ss_pred             CCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEE
Q psy9280          65 ALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV  139 (143)
Q Consensus        65 al~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav  139 (143)
                      .-+.....++.++++.+....++-+|||.-+|+.      +.++..-.+        ..+.+++..+|.|||++|
T Consensus       166 vQG~~a~~~i~~al~~~~~~~~~dviii~RGGGs------~eDL~~Fn~--------e~~~rai~~~~~Pvis~i  226 (432)
T TIGR00237       166 VQGEGAVQSIVESIELANTKNECDVLIVGRGGGS------LEDLWSFND--------EKVARAIFLSKIPIISAV  226 (432)
T ss_pred             ccCccHHHHHHHHHHHhhcCCCCCEEEEecCCCC------HHHhhhcCc--------HHHHHHHHcCCCCEEEec
Confidence            3455667788899988887666777887433332      222222221        244578999999999997

This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.

>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]

Probab=91.30  E-value=0.56  Score=38.95  Aligned_cols=57  Identities=21%  Similarity=0.365  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHhcCCCeeEEEE-EcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEE
Q psy9280          68 DALVSEVAAAVQQFDQDSSVAAIVL-TGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV  139 (143)
Q Consensus        68 ~~~~~el~~~l~~~~~d~~vr~vVl-tg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav  139 (143)
                      ..--.++.++++.+++..++.++|+ +|+|       -++++..-.++        .+.++++.+++|+|++|
T Consensus       175 ~~A~~eIv~aI~~an~~~~~DvlIVaRGGG-------SiEDLW~FNdE--------~vaRAi~~s~iPvISAV  232 (440)
T COG1570         175 EGAAEEIVEAIERANQRGDVDVLIVARGGG-------SIEDLWAFNDE--------IVARAIAASRIPVISAV  232 (440)
T ss_pred             CCcHHHHHHHHHHhhccCCCCEEEEecCcc-------hHHHHhccChH--------HHHHHHHhCCCCeEeec
Confidence            3456688888888888887888888 4533       33333322222        34578999999999998

>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed

Probab=90.32  E-value=0.7  Score=38.14  Aligned_cols=58  Identities=16%  Similarity=0.283  Sum_probs=37.3

Q ss_pred             CCHHHHHHHHHHHHHHhcCCCeeEEEE-EcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEE
Q psy9280          66 LCDALVSEVAAAVQQFDQDSSVAAIVL-TGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAV  139 (143)
Q Consensus        66 l~~~~~~el~~~l~~~~~d~~vr~vVl-tg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav  139 (143)
                      -+...-.++.+++..+.... +-+||| +|+| .      +.++..-.+        ..+.+++..+|.|||++|
T Consensus       173 QG~~A~~~i~~al~~~~~~~-~Dviii~RGGG-S------~eDL~~Fn~--------e~v~~ai~~~~~Pvis~I  231 (438)
T PRK00286        173 QGEGAAASIVAAIERANARG-EDVLIVARGGG-S------LEDLWAFND--------EAVARAIAASRIPVISAV  231 (438)
T ss_pred             cCccHHHHHHHHHHHhcCCC-CCEEEEecCCC-C------HHHhhccCc--------HHHHHHHHcCCCCEEEec
Confidence            44456778888888887643 556766 5543 2      233322221        244678999999999997

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=86.54  E-value=2.6  Score=36.35  Aligned_cols=61  Identities=18%  Similarity=0.242  Sum_probs=41.5

Q ss_pred             HHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecC
Q psy9280          69 ALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGY  142 (143)
Q Consensus        69 ~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~  142 (143)
                      -.+.++.++++++..|+.|++|||.-.+   +.|..+..          .+.+.+.+..+....|||||..++.
T Consensus        76 ~~l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~----------~~ei~~ai~~fk~sgKpVvA~~~~~  136 (584)
T TIGR00705        76 ISLFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPH----------LVEIGSALSEFKDSGKPVYAYGTNY  136 (584)
T ss_pred             cCHHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHH----------HHHHHHHHHHHHhcCCeEEEEEccc
Confidence            3567999999999999999999997532   11222211          1234555566667789999976654

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=84.76  E-value=4.3  Score=28.95  Aligned_cols=59  Identities=20%  Similarity=0.242  Sum_probs=40.7

Q ss_pred             CCHHHHHHHHHHHHHHhcCCCeeEEEE--EcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280          66 LCDALVSEVAAAVQQFDQDSSVAAIVL--TGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus        66 l~~~~~~el~~~l~~~~~d~~vr~vVl--tg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ++..+.+++.+.|..++.++..+.|+|  .+.|+      ++             ......+..|..+++|+++.+.|.|
T Consensus         9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~InSpGG------~v-------------~~~~~i~~~i~~~~~~v~~~~~g~a   69 (162)
T cd07013           9 VEDISANQFAAQLLFLGAVNPEKDIYLYINSPGG------DV-------------FAGMAIYDTIKFIKADVVTIIDGLA   69 (162)
T ss_pred             ECcHHHHHHHHHHHHHhcCCCCCCEEEEEECCCC------cH-------------HHHHHHHHHHHhcCCCceEEEEeeh
Confidence            467888999999999998876666666  34443      21             1233456667778888998888865

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas

>PRK10949 protease 4; Provisional

Probab=82.86  E-value=4.4  Score=35.28  Aligned_cols=59  Identities=22%  Similarity=0.258  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEe
Q psy9280          69 ALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVN  140 (143)
Q Consensus        69 ~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~  140 (143)
                      -.+.++.++++++..|+.|++|||.-.+..   |..+.      .    .+.+.+.+..+....||+||.-+
T Consensus        95 ~~l~div~~i~~Aa~D~rIkgivL~i~s~g---G~~~a------~----~~eI~~ai~~fk~sGKpVvA~~~  153 (618)
T PRK10949         95 NSLFDIVNTIRQAKDDRNITGIVLDLKNFA---GADQP------S----MQYIGKALREFRDSGKPVYAVGD  153 (618)
T ss_pred             ccHHHHHHHHHHHhcCCCceEEEEEeCCCC---CccHH------H----HHHHHHHHHHHHHhCCeEEEEec
Confidence            345689999999999999999999753210   11110      0    02345556666677899998543

>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]

Probab=82.35  E-value=5.2  Score=31.52  Aligned_cols=50  Identities=26%  Similarity=0.398  Sum_probs=33.1

Q ss_pred             HHHHHHHhcCCCeeEEEEEcC-CCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280          75 AAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus        75 ~~~l~~~~~d~~vr~vVltg~-g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .++|+.+++|++.++||+-|. |+             ..+     +...+.+.+ ....||+||.+-|.+
T Consensus       189 id~L~~fe~Dp~T~~ivmiGEiGG-------------~aE-----e~AA~~i~~-~~~~KPVVa~iaG~t  239 (293)
T COG0074         189 IDALEMFEADPETEAIVMIGEIGG-------------PAE-----EEAAEYIKA-NATRKPVVAYIAGRT  239 (293)
T ss_pred             HHHHHHHhcCccccEEEEEecCCC-------------cHH-----HHHHHHHHH-hccCCCEEEEEeccC
Confidence            367888899999999999885 21             111     122333444 344599999998863

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	143
2hw5_A	286	The Crystal Structure Of Human Enoyl-Coenzyme A (Co		2e-35
1ey3_A	258	Structure Of Enoyl-Coa Hydratase Complexed With The		8e-35
1mj3_A	260	Crystal Structure Analysis Of Rat Enoyl-Coa Hydrata		9e-35
1dub_A	261	2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph		9e-35
3moy_A	263	Crystal Structure Of Probable Enoyl-Coa Hydratase F		9e-22
3q0j_A	258	Crystal Structure Of The Mycobacterium Tuberculosis		2e-21
3h81_A	278	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		2e-21
3pzk_A	257	Crystal Structure Of The Mycobacterium Tuberculosis		2e-21
2pbp_A	258	Crystal Structure Of Enoyl-Coa Hydrates Subunit I (		3e-17
4fzw_A	258	Crystal Structure Of The Paaf-paag Hydratase-isomer		2e-14
3qka_A	261	Crystal Structure Of Enoyl-Coa Hydratase Echa5 From		4e-10
3hrx_A	254	Crystal Structure Of Phenylacetic Acid Degradation		6e-10
3tlf_A	274	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		4e-09
3qmj_A	256	Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 Fr		6e-09
4hdt_A	353	Crystal Structure Of A Carnitinyl-Coa Dehydratase F		7e-09
3myb_A	286	Crystal Structure Of Enoyl-Coa Hydratase Mycobacter		8e-09
3he2_A	264	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		1e-08
2vss_F	276	Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C		2e-08
2vsu_F	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		3e-08
2vre_A	296	Crystal Structure Of Human Peroxisomal Delta3,5, De		3e-08
2vsu_A	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		3e-08
2j5i_B	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		3e-08
2vss_E	276	Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C		3e-08
2j5i_I	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		3e-08
2vsu_E	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		3e-08
2j5i_A	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		3e-08
2vsu_C	275	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		3e-08
3p85_A	270	Crystal Structure Enoyl-Coa Hydratase From Mycobact		3e-08
3qyr_A	253	Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 M		3e-08
3r0o_A	273	Crystal Structure Of Carnitinyl-Coa Hydratase From		4e-08
1dci_A	275	Dienoyl-Coa Isomerase Length = 275		5e-08
3rsi_A	265	The Structure Of A Putative Enoyl-Coa HydrataseISOM		7e-08
4j2u_A	365	Crystal Structure Of An Enoyl-coa Hydratase From Rh		9e-08
3rrv_A	276	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		2e-07
1nzy_A	269	4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo		2e-07
1nzy_B	269	4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo		2e-07
3r9t_A	267	Structure Of Echa1_1 From Mycobacterium Paratubercu		2e-07
3r9s_A	267	Structure Of A Carnitinyl-Coa Dehydratase From Myco		3e-07
4di1_A	277	Crystal Structure Of Enoyl-Coa Hydratase Echa17 Fro		3e-07
1jxz_A	269	Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coe		3e-07
3p5m_A	255	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		5e-07
3sll_A	290	Crystal Structure Of A Probable Enoyl-Coa Hydratase		5e-07
3trr_A	256	Crystal Structure Of A Probable Enoyl-Coa Hydratase		1e-06
3qxz_A	265	Crystal Structure Of A Probable Enoyl-Coa Hydratase		2e-06
3pe8_A	256	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		2e-06
3bpt_A	363	Crystal Structure Of Human Beta-Hydroxyisobutyryl-C		2e-06
2a7k_A	250	Carboxymethylproline Synthase (carb) From Pectobact		3e-06
2ej5_A	257	Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydr		3e-06
4f47_A	278	The Structure Of Enoyl-Coa Hydratase Echa19 From My		3e-06
4fzw_C	274	Crystal Structure Of The Paaf-paag Hydratase-isomer		4e-06
3r9q_A	262	Structure Of A Probable Enoyl-Coa HydrataseISOMERAS		4e-06
1uiy_A	253	Crystal Structure Of Enoyl-Coa Hydratase From Therm		4e-06
2uzf_A	273	Crystal Structure Of Staphylococcus Aureus 1,4-Dihy		5e-06
3t3w_A	279	Crystal Structure Of Probable Enoyl-Coa Hydratase F		6e-06
3kqf_A	265	1.8 Angstrom Resolution Crystal Structure Of Enoyl-		7e-06
3fdu_A	266	Crystal Structure Of A Putative Enoyl-Coa Hydratase		7e-06
3pea_A	261	Crystal Structure Of Enoyl-Coa Hydratase From Bacil		9e-06
3qxi_A	265	Crystal Structure Of Enoyl-Coa Hydratase Echa1 From		9e-06
3hin_A	275	Crystal Structure Of Putative Enoyl-Coa Hydratase F		9e-06
3zwb_A	742	Crystal Structure Of Rat Peroxisomal Multifunctiona		1e-05
3zw8_A	742	Crystal Structure Of Rat Peroxisomal Multifunctiona		1e-05
2x58_A	727	The Crystal Structure Of Mfe1 Liganded With Coa Len		1e-05
3qre_A	298	Crystal Structure Of An Enoyl-Coa Hydratase Echa12_		1e-05
3oc7_A	267	Crystal Structure Of An Enoyl-Coa Hydratase From My		1e-05
2iex_A	272	Crystal Structure Of Dihydroxynapthoic Acid Synthet		1e-05
3t88_A	289	Crystal Structure Of Escherichia Coli Menb In Compl		2e-05
3i47_A	268	Crystal Structure Of Putative Enoyl Coa HydrataseIS		2e-05
4els_A	285	Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Co		2e-05
3ome_A	282	Crystal Structure Of A Probable Enoyl-Coa Hydratase		4e-05
3h02_A	288	2.15 Angstrom Resolution Crystal Structure Of Napht		1e-04
3ju1_A	407	Crystal Structure Of Enoyl-Coa HydrataseISOMERASE F		1e-04
1xx4_A	261	Crystal Structure Of Rat Mitochondrial 3,2-Enoyl-Co		2e-04
2f6q_A	280	The Crystal Structure Of Human Peroxisomal Delta3,		3e-04
3hp0_A	267	Crystal Structure Of A Putative Polyketide Biosynth		6e-04
3g64_A	279	Crystal Structure Of Putative Enoyl-Coa Hydratase F		8e-04

>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa) Hydratase Short Chain 1, Echs1 Length = 286

Iteration: 1
 Score =  144 bits (362), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 91/127 (71%)
Query: 17  NNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAA 76
           ++G  +   +LY     S   FE I+ +K GKN  VGL+QLNRPK+LNALCD L+ E+  
Sbjct: 8   SSGVDLGTENLYFQSMASGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQ 67
Query: 77  AVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVI 136
           A++ F++D +V AIVLTG +KAFAAGADIKEM N ++     +  L+HWD++T+ KKPVI
Sbjct: 68  ALKIFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVI 127
Query: 137 AAVNGYA 143
           AAVNGYA
Sbjct: 128 AAVNGYA 134

>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The Substrate Dac-Coa Length = 258

Iteration: 1
 Score =  142 bits (357), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 65/106 (61%), Positives = 83/106 (78%)
Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++ F++D +V AIVLTG EK
Sbjct: 1   FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEK 60
Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           AFAAGADIKEM N+T+        L HWD+IT+ KKPVIAAVNGYA
Sbjct: 61  AFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 106

>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In Complex With Hexadienoyl-Coa Length = 260

Iteration: 1
 Score =  142 bits (357), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 65/106 (61%), Positives = 83/106 (78%)
Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++ F++D +V AIVLTG EK
Sbjct: 3   FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEK 62
Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           AFAAGADIKEM N+T+        L HWD+IT+ KKPVIAAVNGYA
Sbjct: 63  AFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 108

>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5 Length = 261

Iteration: 1
 Score =  142 bits (357), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 65/106 (61%), Positives = 83/106 (78%)
Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++ F++D +V AIVLTG EK
Sbjct: 4   FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEK 63
Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           AFAAGADIKEM N+T+        L HWD+IT+ KKPVIAAVNGYA
Sbjct: 64  AFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 109

>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycob Smegmatis Length = 263

Iteration: 1
 Score = 99.0 bits (245), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 65/93 (69%)
Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
            VGL++L+RP +LNAL   L +EV  A + FD D  + AIV+TG+E+AFAAGADI EM+ 
Sbjct: 19  GVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVT 78
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            T     +  LL  WD++T+ +KP++AAV GYA
Sbjct: 79  LTPHQARERNLLSGWDSLTQVRKPIVAAVAGYA 111

>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Complex With The Inhibitor Acetoacetylcoa Length = 258

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 35  TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG 94
           ++ +E ILV++   ++ VG++ LNRP++LNAL   +++EV +A  + D D  + AI++TG
Sbjct: 1   SMTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITG 57
Query: 95  NEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           + KAFAAGADIKEM + T+A          W  +   + P IAAV GYA
Sbjct: 58  SAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 106

>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 278

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 35  TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG 94
           ++ +E ILV++   ++ VG++ LNRP++LNAL   +++EV +A  + D D  + AI++TG
Sbjct: 21  SMTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITG 77
Query: 95  NEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           + KAFAAGADIKEM + T+A          W  +   + P IAAV GYA
Sbjct: 78  SAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 126

>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Apo Form Length = 257

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 36  VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
           + +E ILV++   ++ VG++ LNRP++LNAL   +++EV +A  + D D  + AI++TG+
Sbjct: 1   MTYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGS 57
Query: 96  EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            KAFAAGADIKEM + T+A          W  +   + P IAAV GYA
Sbjct: 58  AKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 105

>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I (Gk_2039) From Geobacillus Kaustophilus Hta426 Length = 258

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 57/92 (61%)
Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ 111
           VG+++L RP  LNAL   +V+E+ AAV+ FD++  V  IVLTG  +AFAAGADI+EM   
Sbjct: 15  VGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKD 74
Query: 112 TYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
                        WD ++  K P+IAAVNG A
Sbjct: 75  DPIRLEWLNQFADWDRLSIVKTPMIAAVNGLA 106

>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 258

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 60/98 (61%)
Query: 46  VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI 105
           V + + V L+ LNRP + NAL +AL+ ++   ++    D+S++  V+TGN + FAAGAD+
Sbjct: 9   VSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADL 68
Query: 106 KEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            EM  +  AA +     + W  +    KP+IAAVNGYA
Sbjct: 69  NEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYA 106

>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From Mycobacterium Marinum Length = 261

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 53/99 (53%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           +V +N  V  V +NRP++ NA+     + + +A  +FD+D S +  VL GN   F AGAD
Sbjct: 11  QVERNGPVTTVIINRPQARNAVNGPTAAALYSAFAEFDRDESASVAVLCGNGGTFCAGAD 70
Query: 105 IKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +K        A  +TG      +     KPVIAAV+GYA
Sbjct: 71  LKAFGTAEANAVHRTGPGPMGPSRMMLSKPVIAAVSGYA 109

>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein Paag Length = 254

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 62/102 (60%), Gaps = 11/102 (10%)
Query: 48  KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKE 107
           +   V ++ LNRP+ LNA+   L+  + AA+++ ++D  V A++LTG  +AF+AG D+ E
Sbjct: 6   RQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTE 65
Query: 108 MLNQT--YAANVKTGLLEHWDNITKA----KKPVIAAVNGYA 143
             ++   Y A+++      ++ + +A    +KP++ AVNG A
Sbjct: 66  FGDRKPDYEAHLR-----RYNRVVEALSGLEKPLVVAVNGVA 102

>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 274

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 30  IKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAA 89
           +    T+K+E   VD      +   + LNRP +LNAL   +++E+ AA  + + D  V  
Sbjct: 7   VDSFDTIKYE---VDG-----HTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWL 58
Query: 90  IVLTGNEKAFAAGADIKEMLNQTYAANVKTGL--LEHWDNITKAK-------KPVIAAVN 140
           +V+TG  +AF +GAD+KE+         +  L   + W+   +         KPV+ AVN
Sbjct: 59  LVVTGTGRAFCSGADVKEIPEDGKVIYERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVN 118
Query: 141 G 141
           G
Sbjct: 119 G 119

>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From Mycobacterium Marinum Length = 256

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           ++  +  V  + LNRP++LNA  +AL    A A+     D  VA ++LTG+ + F+AG D
Sbjct: 9   QIDDDNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTD 68
Query: 105 IKEMLNQTYAANVKTGLLEHWDNITKA----KKPVIAAVNG 141
           + EM  +    N   G    +  + KA     KP+I AVNG
Sbjct: 69  LAEMQARITDPNFSEGKF-GFRGLIKALAGFPKPLICAVNG 108

>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile Length = 353

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           M T K E++LV+  G    VGL+ LNRPK++N+L   +V+ +A  +  ++ D SV A++L
Sbjct: 3   MVTAKNEDVLVNVEG---GVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLL 59
Query: 93  TG-NEKAFAAGADI 105
           TG  E+   AG D+
Sbjct: 60  TGAGERGLCAGGDV 73

>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium Smegm Length = 286

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 49  NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
            + V  + LNRP++ NAL +A+++ +  A     +D SV A+VL  + KAF AG D+KEM
Sbjct: 33  ERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEM 92
Query: 109 L---NQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
               ++ Y   +     +    I +   PVIA V+G A
Sbjct: 93  RAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIA 130

>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 264

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 55  VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA 114
           ++L RP+  NAL   LV E+  A+++   D S  AIVLTG   AF AGAD+       +A
Sbjct: 34  IELQRPERRNALNSQLVEELTQAIRKAG-DGSARAIVLTGQGTAFCAGADLS---GDAFA 89
Query: 115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           A+    L+E    +  +  PV+ A+NG A
Sbjct: 90  ADYPDRLIELHKAMDASPMPVVGAINGPA 118

>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           KV     +  V LNRP+  NA+   L  E+   ++  +QD +   +VLTG  +A+ AG D
Sbjct: 12  KVEIEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +KE   +  A          +      W  +    KP IA VNG+ 
Sbjct: 72  LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117

>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           KV     +  V LNRP+  NA+   L  E+   ++  +QD +   +VLTG  +A+ AG D
Sbjct: 12  KVEIEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +KE   +  A          +      W  +    KP IA VNG+ 
Sbjct: 72  LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117

>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5, Delta2,4-Dienoyl Coa Isomerase Length = 296

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 17  NNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAA 76
           ++G  +   +LY         +E++ V      K+V  VQLNRP   NA+      E+  
Sbjct: 8   SSGVDLGTENLYFQSMAPDHSYESLRV--TSAQKHVLHVQLNRPNKRNAMNKVFWREMVE 65
Query: 77  AVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT-------------YAANVKTGLLE 123
              +  +D+   A+V++G  K F AG D+ +M +               Y  ++ T   E
Sbjct: 66  CFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQE 125
Query: 124 HWDNITKAKKPVIAAVNG 141
            ++ I +  KPVIAAV+G
Sbjct: 126 TFNVIERCPKPVIAAVHG 143

>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism. Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           KV     +  V LNRP+  NA+   L  E+   ++  +QD +   +VLTG  +A+ AG D
Sbjct: 12  KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +KE   +  A          +      W  +    KP IA VNG+ 
Sbjct: 72  LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117

>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           KV     +  V LNRP+  NA+   L  E+   ++  +QD +   +VLTG  +A+ AG D
Sbjct: 12  KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +KE   +  A          +      W  +    KP IA VNG+ 
Sbjct: 72  LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117

>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           KV     +  V LNRP+  NA+   L  E+   ++  +QD +   +VLTG  +A+ AG D
Sbjct: 12  KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +KE   +  A          +      W  +    KP IA VNG+ 
Sbjct: 72  LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117

>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           KV     +  V LNRP+  NA+   L  E+   ++  +QD +   +VLTG  +A+ AG D
Sbjct: 12  KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +KE   +  A          +      W  +    KP IA VNG+ 
Sbjct: 72  LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117

>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           KV     +  V LNRP+  NA+   L  E+   ++  +QD +   +VLTG  +A+ AG D
Sbjct: 12  KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +KE   +  A          +      W  +    KP IA VNG+ 
Sbjct: 72  LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117

>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           KV     +  V LNRP+  NA+   L  E+   ++  +QD +   +VLTG  +A+ AG D
Sbjct: 12  KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +KE   +  A          +      W  +    KP IA VNG+ 
Sbjct: 72  LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117

>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 275

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           KV     +  V LNRP+  NA+   L  E+   ++  +QD +   +VLTG  +A+ AG D
Sbjct: 12  KVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMD 71
Query: 105 IKEMLNQTYAAN-------VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +KE   +  A          +      W  +    KP IA VNG+ 
Sbjct: 72  LKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117

>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium Avium Length = 270

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 49  NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
            + V  + LNRP++ NAL  AL      A+   + D  V  +++TG +  F AG D+KE+
Sbjct: 32  EERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKEL 91
Query: 109 LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
              +   ++       W  +T   KPVI A+NG A
Sbjct: 92  GGSSALPDIS----PRWPALT---KPVIGAINGAA 119

>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 50  KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML 109
           + V  + LNRP++ NAL  AL      A+   + D  V  +++TG +  F AG D+KE+ 
Sbjct: 16  ERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKELG 75
Query: 110 NQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             +   ++       W  +T   KPVI A+NG A
Sbjct: 76  GSSALPDIS----PRWPALT---KPVIGAINGAA 102

>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From Mycobacterium Avium Length = 273

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 46  VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGAD 104
           V +  NV L+ ++RP + NA+  A+ + V  A+++  +D  V A+V+TG  +K+F AGAD
Sbjct: 19  VERRGNVALITIDRPDARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGAGDKSFCAGAD 78
Query: 105 IKEML---NQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +K +    N  +A + + G   +  +     KP IAAVNG A
Sbjct: 79  LKAISRGENLYHAEHPEWGFAGYVHHFI--DKPTIAAVNGTA 118

>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase Length = 275

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E+I V      K+V  VQLNRP+  NA+  A   E+    Q+  +DS   A+V++G  K
Sbjct: 2   YESIQV--TSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGK 59
Query: 98  AFAAGADIKEMLNQT-------------YAANVKTGLLEHWDNITKAKKPVIAAVNG 141
            F +G D+ +M +               Y  ++ +   + +  I K  KPVIAA++G
Sbjct: 60  MFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHG 116

>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 265

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
             +LV++ G    V ++ +NRP   NAL   +VS+ AAA  + D D  + A +LTG   A
Sbjct: 9   RELLVERDGP---VVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSA 65
Query: 99  FAAGADIKE--MLNQTYA-----ANVKTG-LLEHWDNITKAKKPVIAAVNG 141
           +  G D+ +  M+    A     A +  G LL H   +T   KP+IAAVNG
Sbjct: 66  YCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLSH--TLT---KPLIAAVNG 111

>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From Rhodobacter Sphaeroides 2.4.1 Length = 365

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 40  NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKA 98
           ++L+ KV   +  G + L+RP +LNAL  A V E+ AA++ +  D  V  +V+     +A
Sbjct: 25  DVLIRKV---RRAGRITLSRPAALNALTCAXVQEIDAALRGWIGDPEVELVVIDAEGPRA 81
Query: 99  FAAGADIKEMLNQTYAANVKTGLLEHW-------DNITKAKKPVIAAVNGY 142
           F AG DI E+  +  A +   G  + W       D I    KP+++   G+
Sbjct: 82  FCAGGDIAELHGRGVAGDHAFG-QDFWRVEYRXNDRIAAFPKPIVSLXQGF 131

>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 54  LVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY 113
           ++ LNRP SLN++ D L   +A   Q+   D +  A V+TG  +AF+AG D   +   + 
Sbjct: 40  IITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSA 99
Query: 114 AANVKTGLLEHWDNIT----KAKKPVIAAVNGYA 143
            A+++   +     I     + + PV+AAVNG A
Sbjct: 100 DADLRAKTIRDGREIVLGMARCRIPVVAAVNGPA 133

>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
            V  + +  P+  NAL    + EV  A+ + ++D SV A+++TG E AF AG  ++E+  
Sbjct: 12  GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPL 71
Query: 111 QTYAANVK-----TGLLEHW--DNITKAKKPVIAAVNGYA 143
               A V+       L  H     I + K+PV+AA+NG A
Sbjct: 72  DKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVA 111

>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
            V  + +  P+  NAL    + EV  A+ + ++D SV A+++TG E AF AG  ++E+  
Sbjct: 12  GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPL 71
Query: 111 QTYAANVK-----TGLLEHW--DNITKAKKPVIAAVNGYA 143
               A V+       L  H     I + K+PV+AA+NG A
Sbjct: 72  DKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVA 111

>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 267

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 48  KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIK 106
           +  NV ++ +NRP++ NA+  A+   V  A+++   D  V A+VLTG  +K+F AGAD+K
Sbjct: 15  RRGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLK 74
Query: 107 EMLNQT--YAANVK----TGLLEHWDNITKAKKPVIAAVNGYA 143
            +  +   Y  +       G + H+ +     KP IAAVNG A
Sbjct: 75  AIARRENLYHPDHPEWGFAGYVRHFID-----KPTIAAVNGTA 112

>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Avium 104 Length = 267

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 48  KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIK 106
           +  NV ++ +NRP++ NA+  A+   V  A+++   D  V A+VLTG  +K+F AGAD+K
Sbjct: 15  RRGNVMVITINRPEARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLK 74
Query: 107 EMLNQT--YAANVK----TGLLEHWDNITKAKKPVIAAVNGYA 143
            +  +   Y  +       G + H+ +     KP IAAVNG A
Sbjct: 75  AIARRENLYHPDHPEWGFAGYVRHFID-----KPTIAAVNGTA 112

>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From Mycobacterium Marinum Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 49  NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
           ++ +  + ++RP + NA+   +  E+ AA  +  +   + A+VL G  + F+AG D+ E+
Sbjct: 31  DQGLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPEL 89
Query: 109 --LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             LN   A       LE  D +    KP +AAV GYA
Sbjct: 90  RTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYA 126

>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A (Product) Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 17/105 (16%)
Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM-L 109
            V  + +  P+  NAL    + EV  A+ + ++D SV A+++TG E AF AG  ++E+ L
Sbjct: 12  GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPL 71
Query: 110 NQTYAANVKTGLLEH-------WDN----ITKAKKPVIAAVNGYA 143
           ++  A     G+ +H       W      I + K+PV+AA+NG A
Sbjct: 72  DKGVA-----GVRDHFRIAALWWQQMIHKIIRVKRPVLAAINGVA 111

>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Avium Length = 255

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 55  VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA 114
           ++L+RP+ LNA+   ++ E++  ++  + D SV A++LTG  +AF +G D+        A
Sbjct: 19  IRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTAGAA 78
Query: 115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
                 +      IT   KPVIA V+G A
Sbjct: 79  DAANRVV----RAITSLPKPVIAGVHGAA 103

>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 290

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 41  ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFA 100
           +LVD+      + LV LNRP+ +NA+   ++      +     D+ V A+V+TG  K F 
Sbjct: 25  VLVDR--PRPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFC 82
Query: 101 AGAD---------IKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +GAD         I  +   T A      L E    + +  +PVIAA+NG A
Sbjct: 83  SGADQKSAGPIPHIGGLTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAA 134

>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 256

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 48  KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKE 107
           +   V L+ +NRP + NA+  A+   +AAA  Q D  + ++  ++TG    F AG D+K 
Sbjct: 13  QRDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKA 72
Query: 108 MLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            ++   A   + GL   + N+   +KP+IAAV G+A
Sbjct: 73  FVSGE-AVLSERGL--GFTNVPP-RKPIIAAVEGFA 104

>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 49  NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
              V ++ L+ P + N+    L  ++ AA Q+ D D +V  IVLTG   AF +GA I   
Sbjct: 14  RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAA 73
Query: 109 LNQTYAA---------NVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             +T+AA          V+    E        + PVIAAVNG+A
Sbjct: 74  -AETFAAPRNPDFSASPVQPAAFE-------LRTPVIAAVNGHA 109

>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 256

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 41  ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFA 100
           +LVD   +   V  + LNRP+S NAL   L S    A+     D  V  +++TG +  F 
Sbjct: 11  LLVDTTDR---VRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFC 67
Query: 101 AGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           AG D+KE+ + T   ++       W ++T   KPVI A+NG A
Sbjct: 68  AGLDLKELGDTTELPDIS----PKWPDMT---KPVIGAINGAA 103

>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa Hydrolase In Complex With Quercetin Length = 363

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 46  VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGAD 104
           +GK    G++ LNRPK LNAL    + ++   +++++QD     I++ G   KAF AG D
Sbjct: 10  LGKKGCTGVITLNRPKFLNALTLNXIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGD 69
Query: 105 IKEMLNQTYAANVKTG---LLEHW---DNITKAKKPVIAAVNG 141
           I+ ++++   A  K       E +   + +   +KP +A ++G
Sbjct: 70  IR-VISEAEKAKQKIAPVFFREEYXLNNAVGSCQKPYVALIHG 111

>pdb|2A7K|A Chain A, Carboxymethylproline Synthase (carb) From Pectobacterium Carotovora, Apo Enzyme Length = 250

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKEMLN 110
           V ++ L+ P   N     L + V  A+ + + D SV A+V+ G  E++F+AG D  E+  
Sbjct: 10  VRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQ 69
Query: 111 QTYAANVKTGL---LEHWDNITKAKKPVIAAVNGYA 143
            + + +++  +   ++ +  +    KP IAAV+GYA
Sbjct: 70  LSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYA 105

>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase Subunit Ii) From Geobacillus Kaustophilus Length = 257

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
            V  + LNRP  LNA  + + +EV  A++Q   D +V  +V+TG  +AF AG D+  +  
Sbjct: 12  QVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTE 71
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVN 140
           +          ++H D +     P++ A++
Sbjct: 72  E----------MDHGDVLRSRYAPMMKALH 91

>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From Mycobacterium Marinum Length = 278

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 54  LVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY 113
           +V +NRP   NAL   ++  +  A  + D D  +   +LTG    F AG D+K    +  
Sbjct: 32  IVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPP 91
Query: 114 AANVKTGLLE--HWDNITKA---KKPVIAAVNGYA 143
             + K G  +    D + K    KKP+IAAV G A
Sbjct: 92  GDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPA 126

>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 274

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 49  NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM 108
            K V  + LNRP+ LN+  D + +++A  ++Q ++D ++  ++LTG  + F AG D+ + 
Sbjct: 22  EKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDR 81
Query: 109 LNQTYAANVKTGL-LEHWDN-----ITKAKKPVIA 137
                      G+ +E + N     + K  KPVI 
Sbjct: 82  NVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVIC 116

>pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 262

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           +V K   V  V LNRP + NA+     + + AA  +FD D   +  VL G+   F AGAD
Sbjct: 14  RVEKAGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGAD 73
Query: 105 IKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +K M           G      +  +  KPVIAA++G+A
Sbjct: 74  LKAMGTDRGNELHPHGPGPMGPSRLRLSKPVIAAISGHA 112

>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus Thermophilus Hb8 Length = 253

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
           +V +V LN P+  N L       +  A+   + D  V A+VLTG  KAF+AGAD+  +  
Sbjct: 8   HVAVVFLNDPERRNPLSPEXALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLER 67
Query: 111 QT-------YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            T       Y  ++    L H   +    KP +AAVNG A
Sbjct: 68  VTELGAEENYRHSLSLXRLFH--RVYTYPKPTVAAVNGPA 105

>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus 1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In Complex With Acetoacetyl Coa Length = 273

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 50  KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEM 108
           + +  V +NRP+  NA     V+E+  A  +   D +V+ IVLTG  + AF +G D K+ 
Sbjct: 21  EGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKR 80
Query: 109 LNQTYAAN---VKTGLLEHWDNITKAKKPVIAAVNGYA 143
            +  Y       +  +L+    I    KPVIA V GYA
Sbjct: 81  GHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYA 118

>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycobacterium Thermoresistibile Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 49  NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI--- 105
           +  +  + LNRP++ NA    L+ E+ AA  +  +D+ V+ IVL  N K F+AG D+   
Sbjct: 27  SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGG 86
Query: 106 -----KEMLNQTYAANVKTGLLEH---WDNITKAKKPVIAAVNG 141
                K  L   YA   +   LE+   W N+    KP IAAV G
Sbjct: 87  GPVPDKLTLEFIYAHESRR-YLEYSLRWRNV---PKPSIAAVQG 126

>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis. Length = 265

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
           + ++ +NI VD      +V  + LNR +  N+L  AL+ E+   + Q +++++   ++LT
Sbjct: 3   AXLQLQNISVDYA--TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILT 60
Query: 94  G-NEKAFAAGADIKEM--LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           G  EKAF AGAD+KE    N+    +  + +    + + +  +PVIAA+NG A
Sbjct: 61  GAGEKAFCAGADLKERAGXNEEQVRHAVSXIRTTXEXVEQLPQPVIAAINGIA 113

>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Acinetobacter Baumannii Length = 266

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 57  LNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML------N 110
           +NRP++ NAL   L   +A A+ + DQ+  V  +VL G E  F AG D+K+ +      N
Sbjct: 20  INRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN 79
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
              A  V   +L    +  +  KP+I AV G A
Sbjct: 80  AGPAGQVPPFVL--LKSAARLSKPLIIAVKGVA 110

>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis Str. 'ames Ancestor' Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 64  NALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLE 123
           NA    +  +V   + Q ++D ++  +V+ G  + F+AGADIKE  + T A    T L +
Sbjct: 27  NAXSSQVXHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQA-TELAQ 85
Query: 124 ----HWDNITKAKKPVIAAVNGYA 143
                ++ + K  KPVIAA++G A
Sbjct: 86  LGQVTFERVEKCSKPVIAAIHGAA 109

>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From Mycobacterium Marinum Length = 265

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 54  LVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN--Q 111
           ++ +NRPK+ N++  A+   +A A+ + D D+ ++  +LTG   +F AG D+K       
Sbjct: 27  IITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGEN 86
Query: 112 TYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
                   G  E         KP+IAAV GYA
Sbjct: 87  VVVEGRGLGFTER-----PPAKPLIAAVEGYA 113

>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Rhodopseudomonas Palustris Cga009 Length = 275

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 40  NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAF 99
            ++VD VG    +GL   NRPK  NAL D L++ +   +   D    + A+V+ G    F
Sbjct: 17  TLVVDTVGPVLTIGL---NRPKKRNALNDGLMAALKDCLT--DIPDQIRAVVIHGIGDHF 71
Query: 100 AAGADIKEMLNQTYAANVKTGLL--EHW----DNITKAKKPVIAAVNG 141
           +AG D+ E+  +    +   GL+  + W    D I   + PVIAA+ G
Sbjct: 72  SAGLDLSELRER----DATEGLVHSQTWHRVFDKIQYCRVPVIAALKG 115

>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional Enzyme Type 1 (rpmfe1) Complexed With 2trans-hexenoyl-coa Length = 742

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
           ++ +++L  P  +NA+   ++ EV   +Q+   D +V AIV+ G    F AGADI     
Sbjct: 30  SLAMIRLCNP-PVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGF-- 86
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
             +   +  G L   D I + +KPV+AA+ G
Sbjct: 87  SAFTPGLALGSLV--DEIQRYQKPVLAAIQG 115

>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional Enzyme Type 1 (rpmfe1) In Apo Form Length = 742

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
           ++ +++L  P  +NA+   ++ EV   +Q+   D +V AIV+ G    F AGADI     
Sbjct: 30  SLAMIRLCNP-PVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGF-- 86
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
             +   +  G L   D I + +KPV+AA+ G
Sbjct: 87  SAFTPGLALGSLV--DEIQRYQKPVLAAIQG 115

>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa Length = 727

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
           ++ +++L  P  +NA+   ++ EV   +Q+   D +V AIV+ G    F AGADI     
Sbjct: 15  SLAMIRLCNP-PVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGF-- 71
Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
             +   +  G L   D I + +KPV+AA+ G
Sbjct: 72  SAFTPGLALGSLV--DEIQRYQKPVLAAIQG 100

>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From Mycobacterium Marinum Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAG-----ADI 105
            V ++  NR   LNA    L +   AA+ + + D  +  IVLTG  + F AG     AD 
Sbjct: 39  GVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADA 98
Query: 106 KEMLNQTYA----ANVKTGLLEHWDN-ITKAKKPVIAAVNG 141
               ++T A    AN+   + E   + +T  +KPVIAA+NG
Sbjct: 99  AAGYDKTMAKAKDANLADLVGERPPHFVTMLRKPVIAAING 139

>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From Mycobacterium Avium Length = 267

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 40  NILVDKVGKNKNVGLV---QLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
           + LVD  G     G V    LN P + NAL  ALVS++   ++    D +V  +VL    
Sbjct: 6   DALVDYAGPAATGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTG 65
Query: 97  KAFAAGADIKEMLNQTYAANVKTGLLEHWDN-------ITKAKKPVIAAVNGY 142
             F AGAD+ E  +    ++     +E           I +++ PVIAA++G+
Sbjct: 66  GTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGH 118

>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase (Gk2873) From Geobacillus Kaustophilus Hta426 Length = 272

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 30  IKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAA 89
            +++    +E+I+ +       +  + +NRP+  NA     V+E+  A  +   DS++  
Sbjct: 3   FEWVKQYDYEDIIYETY---NGIAKITINRPEVHNAFRPKTVNEMIDAFTKARDDSNIGV 59
Query: 90  IVLTG-NEKAFAAGADIKEMLNQTYAAN---VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           I+LTG   KAF +G D K   +  Y       +  +L+    I    KPVIA V GYA
Sbjct: 60  IILTGAGGKAFCSGGDQKVRGHGGYVGEDEIPRLNVLDLQRLIRVIPKPVIAMVAGYA 117

>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With Substrate Analogue, Osb-Ncoa Length = 289

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NE 96
           FE+I  +K      +  + +NRP+  NA     V E+  A+     D ++  I+LTG  +
Sbjct: 26  FEDIRYEK--STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGD 83
Query: 97  KAFAAGADIKEMLNQTYAANVKTGLLEHWD------NITKAKKPVIAAVNGYA 143
           KAF +G D K  +   Y        + H +       I    KPV+A V GY+
Sbjct: 84  KAFCSGGDQK--VRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYS 134

>pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE (Crotonase) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 Length = 268

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 52  VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADI---KEM 108
           VGL+ +NR    NA  + L++E+   +     D++V  IVL  N K F+AGAD+   + M
Sbjct: 14  VGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSM 73
Query: 109 LNQTYAANVKTGLL--EHWDNITKAKKPVIAAV 139
            N T   N++  L+      +I+++ KP IA V
Sbjct: 74  ANFTEEENLEDSLVLGNLMYSISQSPKPTIAMV 106

>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme A Synthases (Menb) In Complex With Bicarbonate Length = 285

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NE 96
           FE+I  +K      +  + +NRP+  NA     V E+  A+     D ++  I+LTG  +
Sbjct: 22  FEDIRYEK--STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGD 79
Query: 97  KAFAAGADIKEMLNQTYAANVKTGLLEHWD------NITKAKKPVIAAVNGYA 143
           KAF +G D K  +   Y        + H +       I    KPV+A V GY+
Sbjct: 80  KAFCSGGDQK--VRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYS 130

>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 282

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 47  GKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIK 106
           G   ++  + LNRP++ NA    L+ E+ AA  +  +D+ V  I+L  N K F+AG D++
Sbjct: 28  GVADSIATITLNRPEAANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKHFSAGHDLR 87
Query: 107 -----------EMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
                      E + Q  A       L  W N+    KP IAAV G
Sbjct: 88  GGGEVPEKISLEFIIQHEARRYLDYTL-RWRNV---PKPSIAAVQG 129

>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate Synthase From Salmonella Typhimurium. Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 55  VQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEMLNQTY 113
           + +NRP+  NA     V E   A+     D +V  I+LTG  +KAF AG D K  +   Y
Sbjct: 40  ITINRPQVRNAFRPLTVKEXIQALADARYDDNVGVIILTGEGDKAFCAGGDQK--VRGDY 97
Query: 114 AANVKTGLLEHWD------NITKAKKPVIAAVNGYA 143
                   + H +       I    KPV+A V GY+
Sbjct: 98  GGYQDDSGVHHLNVLDFQRQIRTCPKPVVAXVAGYS 133

>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY PROTEIN Length = 407

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 49  NKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKE 107
            K VG+V LN  K+LNAL    V      +  + +D  +A +VL G+ EKAF AG D++ 
Sbjct: 49  GKLVGVVTLNVEKALNALDLDXVRAXTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRA 108
Query: 108 MLNQTYAA 115
           + + + AA
Sbjct: 109 LYHASVAA 116

>pdb|1XX4|A Chain A, Crystal Structure Of Rat Mitochondrial 3,2-Enoyl-Coa Length = 261

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
           + +LV+K G+   + +++   P  +N+L    ++E   ++++ + D S+  ++LT     
Sbjct: 4   KRVLVEKEGE-AGIAVMKFKNP-PVNSLSLEFLTEFVISLEKLENDKSIRGVILTSERPG 61
Query: 99  -FAAGADIKEML--NQTYAANVKTGLLEHWDNITKAKKPVIAAVNG 141
            F+AG D+ EM   N  + A     + E W  +  +   +I+A+NG
Sbjct: 62  IFSAGLDLMEMYGRNPAHYAEYWKAVQELWLRLYLSNLTLISAING 107

>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2 Enoyl Coa Isomerase (Peci) Length = 280

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 32  YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
           Y  +  FE ++V        +  +  NRPK  NA+      E+  A++   +D S+   V
Sbjct: 19  YFQSXGFETLVVTS---EDGITKIXFNRPKKKNAINTEXYHEIXRALKAASKDDSIIT-V 74
Query: 92  LTGNEKAFAAGADIKEMLN------QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           LTGN   +++G D+    +      +  A N    L E         KP+IA VNG A
Sbjct: 75  LTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPA 132

>pdb|3HP0|A Chain A, Crystal Structure Of A Putative Polyketide Biosynthesis Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis Length = 267

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
           S V ++ I   KV    +V  +  +RP++ N + D L+ E    + Q +  S+V  +VL 
Sbjct: 2   SLVTYQTI---KVRFQASVCYITFHRPEANNTINDTLIEECLQVLNQCE-TSTVTVVVLE 57
Query: 94  GNEKAFAAGADIKEMLNQT----YAANVKTGLLEHWDNITKAKKPVIAAVNG 141
           G  + F  GAD +E+  +       A+ +  L + W  +       I+ V G
Sbjct: 58  GLPEVFCFGADFQEIYQEXKRGRKQASSQEPLYDLWXKLQTGPYVTISHVRG 109

>pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2) Length = 279

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 45  KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGAD 104
           +V     V  V L RP  LNAL     +++   + +  +  +V A+VL G  + F +G D
Sbjct: 20  RVEITDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGD 79
Query: 105 IKEMLNQTYAANV 117
           + E++  T + + 
Sbjct: 80  VDEIIGATLSXDT 92

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	143
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	2e-51
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	5e-49
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	9e-48
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	1e-47
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	2e-43
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	2e-43
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	1e-42
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	3e-42
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	5e-42
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	6e-42
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	1e-41
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	2e-41
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	2e-41
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	2e-41
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	5e-41
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	1e-40
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	1e-40
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	2e-40
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	3e-40
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	4e-40
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	1e-39
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	1e-39
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	1e-39
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	2e-39
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	2e-39
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	2e-39
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	4e-39
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	9e-39
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	9e-39
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	1e-38
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	1e-38
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	3e-38
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	4e-38
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	6e-38
3t3w_A	279	Probable enoyl-COA hydratase; ssgcid, structural g	1e-37
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	2e-37
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	2e-37
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	7e-37
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	8e-37
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	1e-36
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	2e-36
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	3e-36
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	4e-36
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	2e-35
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	3e-35
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	3e-35
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	4e-35
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	5e-35
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	1e-34
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	3e-34
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	2e-33
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 11251J, struct	3e-32
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	6e-32
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	1e-31
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	2e-31
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	2e-30
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	3e-30
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	5e-30
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	6e-30
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	2e-29
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	2e-29
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	2e-28
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	2e-28
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	2e-28
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	1e-27
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	8e-27
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	1e-26
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	1e-25
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	1e-18
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	1e-17
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	1e-17
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	3e-17
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	9e-17

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Length = 260

 Score =  163 bits (414), Expect = 2e-51
 Identities = 65/106 (61%), Positives = 83/106 (78%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++ F++D +V AIVLTG EK
Sbjct: 3   FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEK 62

Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           AFAAGADIKEM N+T+        L HWD+IT+ KKPVIAAVNGYA
Sbjct: 63  AFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 108

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Length = 263

 Score =  156 bits (398), Expect = 5e-49
 Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 2/112 (1%)

Query: 32  YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
             S   +  I   +      VGL++L+RP +LNAL   L +EV  A + FD D  + AIV
Sbjct: 2   PGSMTTYTTIATSR--PVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIV 59

Query: 92  LTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           +TG+E+AFAAGADI EM+  T     +  LL  WD++T+ +KP++AAV GYA
Sbjct: 60  VTGSERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGYA 111

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Length = 278

 Score =  154 bits (391), Expect = 9e-48
 Identities = 46/110 (41%), Positives = 68/110 (61%), Gaps = 3/110 (2%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
            ++ +E ILV++      VG++ LNRP++LNAL   +++EV +A  + D D  + AI++T
Sbjct: 20  GSMTYETILVERDQ---RVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIIT 76

Query: 94  GNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           G+ KAFAAGADIKEM + T+A          W  +   + P IAAV GYA
Sbjct: 77  GSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 126

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Length = 258

 Score =  153 bits (389), Expect = 1e-47
 Identities = 48/111 (43%), Positives = 65/111 (58%), Gaps = 5/111 (4%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           MS  +F +I   + G    VG+++L RP  LNAL   +V+E+ AAV+ FD++  V  IVL
Sbjct: 1   MS--EFVSIAARQEG---AVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVL 55

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           TG  +AFAAGADI+EM                WD ++  K P+IAAVNG A
Sbjct: 56  TGRGRAFAAGADIQEMAKDDPIRLEWLNQFADWDRLSIVKTPMIAAVNGLA 106

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} Length = 274

 Score =  142 bits (361), Expect = 2e-43
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 12/120 (10%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           M    F+ I  +  G   +   + LNRP +LNAL   +++E+ AA  + + D  V  +V+
Sbjct: 5   MPVDSFDTIKYEVDG---HTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVV 61

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTGL---------LEHWDNITKAKKPVIAAVNGYA 143
           TG  +AF +GAD+KE+         +  L          E         KPV+ AVNG  
Sbjct: 62  TGTGRAFCSGADVKEIPEDGKVIYERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVNGIC 121

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Length = 276

 Score =  142 bits (361), Expect = 2e-43
 Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 12/120 (10%)

Query: 33  MSTV--KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAI 90
           MST   +++ + V+       +  V LNRP+  NA+   L  E+   ++  +QD +   +
Sbjct: 1   MSTYEGRWKTVKVEIED---GIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVL 57

Query: 91  VLTGNEKAFAAGADIKEMLNQTYAANVKT-------GLLEHWDNITKAKKPVIAAVNGYA 143
           VLTG  +A+ AG D+KE   +  A                 W  +    KP IA VNG+ 
Sbjct: 58  VLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC 117

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Length = 261

 Score =  140 bits (356), Expect = 1e-42
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
           S    + + V       ++ +  LN     NA+   ++ +V   + Q ++D ++  +V+ 
Sbjct: 1   SNAMLKFLSVRVED---HIAVATLNHAP-ANAMSSQVMHDVTELIDQVEKDDNIRVVVIH 56

Query: 94  GNEKAFAAGADIKEMLNQTYAANVKT---GLLEHWDNITKAKKPVIAAVNGYA 143
           G  + F+AGADIKE  + T A             ++ + K  KPVIAA++G A
Sbjct: 57  GEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIHGAA 109

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Length = 265

 Score =  139 bits (353), Expect = 3e-42
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
           + ++ +NI VD      +V  + LNR +  N+L  AL+ E+   + Q +++++   ++LT
Sbjct: 3   AMLQLQNISVDY--ATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILT 60

Query: 94  GN-EKAFAAGADIKEMLNQTYAANVKTG--LLEHWDNITKAKKPVIAAVNGYA 143
           G  EKAF AGAD+KE               +    + + +  +PVIAA+NG A
Sbjct: 61  GAGEKAFCAGADLKERAGMNEEQVRHAVSMIRTTMEMVEQLPQPVIAAINGIA 113

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Length = 265

 Score =  139 bits (352), Expect = 5e-42
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 6/113 (5%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
           S      +LV++ G    V ++ +NRP   NAL   +VS+ AAA  + D D  + A +LT
Sbjct: 4   SMSAARELLVERDG---PVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILT 60

Query: 94  GNEKAFAAGADIKEMLNQTYA---ANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           G   A+  G D+ +                + +         KP+IAAVNG  
Sbjct: 61  GAGSAYCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLSHTLTKPLIAAVNGAC 113

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Length = 278

 Score =  139 bits (352), Expect = 6e-42
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 8/115 (6%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
           +     + LV++ G   +  +V +NRP   NAL   ++  +  A  + D D  +   +LT
Sbjct: 15  NGESGPDALVEQRG---HTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILT 71

Query: 94  GNEKAFAAGADIKEMLNQTYAANVK-----TGLLEHWDNITKAKKPVIAAVNGYA 143
           G    F AG D+K    +    + K        ++      + KKP+IAAV G A
Sbjct: 72  GAGGYFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPA 126

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Length = 262

 Score =  138 bits (349), Expect = 1e-41
 Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           MS      + V+K G    V  V LNRP + NA+     + + AA  +FD D   +  VL
Sbjct: 5   MSEEMQPAVRVEKAG---PVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVL 61

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            G+   F AGAD+K M           G      +  +  KPVIAA++G+A
Sbjct: 62  WGDNGTFCAGADLKAMGTDRGNELHPHGPGPMGPSRLRLSKPVIAAISGHA 112

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Length = 265

 Score =  137 bits (348), Expect = 2e-41
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           ++      +LV++      + ++ +NRPK+ N++  A+   +A A+ + D D+ ++  +L
Sbjct: 9   LNGDTEPEVLVEQRD---RILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGIL 65

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           TG   +F AG D+K             GL           KP+IAAV GYA
Sbjct: 66  TGAGGSFCAGMDLKAFARGENVVVEGRGL---GFTERPPAKPLIAAVEGYA 113

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Length = 256

 Score =  137 bits (347), Expect = 2e-41
 Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 10/110 (9%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
           S      +LVD       V  + LNRP+S NAL   L S    A+     D  V  +++T
Sbjct: 4   SMADSPVLLVDTTD---RVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVT 60

Query: 94  GNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           G +  F AG D+KE+ + T   ++               KPVI A+NG A
Sbjct: 61  GADPVFCAGLDLKELGDTTELPDI-------SPKWPDMTKPVIGAINGAA 103

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Length = 276

 Score =  137 bits (348), Expect = 2e-41
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           M       I V   G    + ++ LNRP SLN++ D L   +A   Q+   D +  A V+
Sbjct: 22  MVYDMPTEIDVRADG---ALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVI 78

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTGLLEHW----DNITKAKKPVIAAVNGYA 143
           TG  +AF+AG D   +   +  A+++   +         + + + PV+AAVNG A
Sbjct: 79  TGAGRAFSAGGDFGYLKELSADADLRAKTIRDGREIVLGMARCRIPVVAAVNGPA 133

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Length = 277

 Score =  136 bits (346), Expect = 5e-41
 Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
            E + V        +  + ++RP + NA+   +  E+ AA  +  +   + A+VL G  +
Sbjct: 23  NEFVSVVADQ---GLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHE 78

Query: 98  AFAAGADIKEMLNQTY--AANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            F+AG D+ E+       A       LE  D +    KP +AAV GYA
Sbjct: 79  IFSAGDDMPELRTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYA 126

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Length = 250

 Score =  135 bits (342), Expect = 1e-40
 Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 7/107 (6%)

Query: 41  ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAF 99
           +  +       V ++ L+ P   N     L + V  A+ + + D SV A+V+ G  E++F
Sbjct: 2   VFEENSD---EVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSF 58

Query: 100 AAGADIKEMLNQTYAANVKT---GLLEHWDNITKAKKPVIAAVNGYA 143
           +AG D  E+   + + +++     +++ +  +    KP IAAV+GYA
Sbjct: 59  SAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYA 105

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Length = 275

 Score =  135 bits (343), Expect = 1e-40
 Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
              ++VD VG    V  + LNRPK  NAL D L++ +   +        + A+V+ G   
Sbjct: 15  PSTLVVDTVG---PVLTIGLNRPKKRNALNDGLMAALKDCLTDIPDQ--IRAVVIHGIGD 69

Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEH--WDNITKAKKPVIAAVNGYA 143
            F+AG D+ E+  +     +      H  +D I   + PVIAA+ G  
Sbjct: 70  HFSAGLDLSELRERDATEGLVHSQTWHRVFDKIQYCRVPVIAALKGAV 117

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Length = 256

 Score =  134 bits (341), Expect = 2e-40
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 7/105 (6%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
           + +L+++      V L+ +NRP + NA+  A+   +AAA  Q D  + ++  ++TG    
Sbjct: 7   DEVLIEQRD---RVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGN 63

Query: 99  FAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           F AG D+K  ++     + +     +       +KP+IAAV G+A
Sbjct: 64  FCAGMDLKAFVSGEAVLSERGLGFTNVP----PRKPIIAAVEGFA 104

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Length = 261

 Score =  134 bits (340), Expect = 3e-40
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG--N 95
           ++ + V  +     V +++ N  + LNAL    + ++  A+   ++   +  I+L     
Sbjct: 3   YQYVNVVTIN---KVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRP-EIRCIILRAPSG 58

Query: 96  EKAFAAGADIKEMLNQTYAANVKTGLL-EHWDNITKAKKPVIAAVNGYA 143
            K F+AG DI E+ +           L +    I K  KP+I+ V G  
Sbjct: 59  SKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSV 107

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Length = 265

 Score =  134 bits (339), Expect = 4e-40
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E + + + G    V ++ LNRP   NA    ++ E+A A+ +++ D+ + A VL G   
Sbjct: 8   YETLRIRRDG---YVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGP 64

Query: 98  AFAAGADIKEM--LNQTYAANVKTGLLEHWDN-ITKAKKPVIAAVNGYA 143
            F AG D+  +    Q  A+    G +  W     +  KP++ AV+G  
Sbjct: 65  LFTAGLDLASVAAEIQGGASLTPEGGINPWQVDGRQLSKPLLVAVHGKV 113

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Length = 269

 Score =  133 bits (336), Expect = 1e-39
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 10/113 (8%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E I          V  + +  P+  NAL    + EV  A+ + ++D SV A+++TG E 
Sbjct: 2   YEAIGHRVED---GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAED 58

Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEH-------WDNITKAKKPVIAAVNGYA 143
           AF AG  ++E+      A V+                I + K+PV+AA+NG A
Sbjct: 59  AFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVA 111

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Length = 253

 Score =  132 bits (335), Expect = 1e-39
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
           +V +V LN P+  N L   +   +  A+   + D  V A+VLTG  KAF+AGAD+  +  
Sbjct: 8   HVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLER 67

Query: 111 QTYAANVK-----TGLLEHWDNITKAKKPVIAAVNGYA 143
            T     +       L+  +  +    KP +AAVNG A
Sbjct: 68  VTELGAEENYRHSLSLMRLFHRVYTYPKPTVAAVNGPA 105

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Length = 265

 Score =  132 bits (335), Expect = 1e-39
 Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 7/113 (6%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
              K + + V K      +  + L+  K  N+       E  AA+     D  +  +++ 
Sbjct: 4   VETKKQYLTVFKED---GIAEIHLHINK-SNSYDLEFYKEFNAAIDDIRFDPDIKVVIVM 59

Query: 94  GN-EKAFAAGADIKEM--LNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            +  K F+AGADI  +   +  +         E  D I ++ +  IA + G+ 
Sbjct: 60  SDVPKFFSAGADINFLRSADPRFKTQFCLFCNETLDKIARSPQVYIACLEGHT 112

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Length = 290

 Score =  133 bits (337), Expect = 2e-39
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 11/119 (9%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
                  +LVD+      + LV LNRP+ +NA+   ++      +     D+ V A+V+T
Sbjct: 18  GPGSMSFVLVDRP--RPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVIT 75

Query: 94  GNEKAFAAGADIKEMLNQTYAANVKTGLLEH---------WDNITKAKKPVIAAVNGYA 143
           G  K F +GAD K      +   +    +              + +  +PVIAA+NG A
Sbjct: 76  GAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAA 134

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Length = 275

 Score =  132 bits (335), Expect = 2e-39
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 12/123 (9%)

Query: 30  IKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAA 89
           + +     +++IL  K G    +  + +NRP   NA     V E+  A     +D+ +  
Sbjct: 1   MDWHIAKHYDDILYYKAG---GIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGV 57

Query: 90  IVLTGN------EKAFAAGADIKEMLNQTYAANVKTGLL---EHWDNITKAKKPVIAAVN 140
           ++LTG       + AF +G D        Y  +  T  L   +    I    K VIA V 
Sbjct: 58  VLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVA 117

Query: 141 GYA 143
           GYA
Sbjct: 118 GYA 120

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Length = 272

 Score =  132 bits (335), Expect = 2e-39
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EK 97
           E  +     +N+ + ++ +NR    N+L   L+  ++ AV     D  V  I++      
Sbjct: 9   ELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPG 68

Query: 98  AFAAGADIKEMLNQTY--AANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            F AGAD+KE    +        + +    ++I     P IAA++G A
Sbjct: 69  IFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLA 116

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Length = 287

 Score =  132 bits (334), Expect = 4e-39
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           +    +  + V        V  + L+ P  +N +   ++ E+   +     DSSV  IV 
Sbjct: 3   LRNDAYSTLRVSSEH---GVARIILDNPP-VNVIGATMMRELRTVLTTLADDSSVRVIVF 58

Query: 93  TG-NEKAFAAGADIKEMLNQTYAANVKTG-------LLEHWDNITKAKKPVIAAVNGYA 143
           +  + + F A  D++          +               + I    +  I  + G A
Sbjct: 59  SSADPEFFLAHVDMRIGEKMDALQELAASAPADVNVFQAVGELIRHQPQVTIVKLAGKA 117

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Length = 258

 Score =  130 bits (330), Expect = 9e-39
 Identities = 26/116 (22%), Positives = 55/116 (47%), Gaps = 8/116 (6%)

Query: 33  MSTVK--FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAI 90
           MS        +  ++ G   ++ L+ L+R    NA   A+++++A A+ ++++       
Sbjct: 4   MSEANSGPGRVTREQRG---HLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCA 60

Query: 91  VLTGNEKAFAAGADIKEMLNQTYAA--NVKTGLLEHWDNI-TKAKKPVIAAVNGYA 143
           VL  + + F AG D+ E+  +  A+      G ++ W  +  +  KP++ AV G  
Sbjct: 61  VLFAHGEHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAVQGTC 116

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Length = 289

 Score =  131 bits (332), Expect = 9e-39
 Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 11/118 (9%)

Query: 33  MS-TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
           MS T  +E I     G    V     N P  +N +   +V ++ A +++    ++   ++
Sbjct: 1   MSLTASYETIKARLDG---TVLSATFNAPP-MNLIGPEVVRDLVALLEELAHPTAPRVVI 56

Query: 92  LTG-NEKAFAAGADIKEMLNQTYAANVKTGLL-----EHWDNITKAKKPVIAAVNGYA 143
               +   F    D+ ++   T  A    G         +  +++     IA + G A
Sbjct: 57  FDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGMLFRKLSQLPAVTIAKLRGRA 114

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} PDB: 3r9s_A 3r0o_A Length = 267

 Score =  130 bits (330), Expect = 1e-38
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           M+       L ++ G   NV ++ +NRP++ NA+  A+   V  A+++   D  V A+VL
Sbjct: 5   MTD--APGALAERRG---NVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVL 59

Query: 93  TGN-EKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKA-KKPVIAAVNGYA 143
           TG  +K+F AGAD+K +  +    +           +     KP IAAVNG A
Sbjct: 60  TGAGDKSFCAGADLKAIARRENLYHPDHPEWGFAGYVRHFIDKPTIAAVNGTA 112

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 3h02_A 2iex_A Length = 289

 Score =  130 bits (330), Expect = 1e-38
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-E 96
           FE+I  +K      +  + +NRP+  NA     V E+  A+     D ++  I+LTG  +
Sbjct: 26  FEDIRYEK--STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGD 83

Query: 97  KAFAAGADIKEMLNQTY----AANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           KAF +G D K   +       +      +L+    I    KPV+A V GY+
Sbjct: 84  KAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYS 134

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Length = 256

 Score =  129 bits (326), Expect = 3e-38
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 6/109 (5%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
              + +D   +   V  + LNRP++LNA  +AL    A A+     D  VA ++LTG+ +
Sbjct: 5   MVTLQIDDDNR---VRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGR 61

Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEH---WDNITKAKKPVIAAVNGYA 143
            F+AG D+ EM  +    N   G          +    KP+I AVNG  
Sbjct: 62  GFSAGTDLAEMQARITDPNFSEGKFGFRGLIKALAGFPKPLICAVNGLG 110

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Length = 243

 Score =  128 bits (324), Expect = 4e-38
 Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 3/104 (2%)

Query: 40  NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAF 99
           N +V        V  + +    S N    ++V  +        Q+     ++LTG    F
Sbjct: 1   NAVVQLTELGNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYF 60

Query: 100 AAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           ++GA  + ++ +T        +L+    I   + P+IAA+ G++
Sbjct: 61  SSGASKEFLIRKTRGE---VEVLDLSGLILDCEIPIIAAMQGHS 101

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Length = 287

 Score =  129 bits (326), Expect = 6e-38
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 6/113 (5%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
              +       ++     +  + L+ PK  N L  A++  + + +      + +  I+++
Sbjct: 28  RESEPRPTSARQLD---GIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIIS 84

Query: 94  GNEKAFAAGADIKEMLNQTYAANVKTGLLEHWD---NITKAKKPVIAAVNGYA 143
                F++G D+KE+  +                  +I     PVIA VNG A
Sbjct: 85  AEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLA 137

>3t3w_A Probable enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Length = 279

 Score =  128 bits (323), Expect = 1e-37
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 10/113 (8%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
              I  D   +   +  + LNRP++ NA    L+ E+ AA  +  +D+ V+ IVL  N K
Sbjct: 19  EMYIDYDVSDR---IATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGK 75

Query: 98  AFAAGADIKEMLNQTYAANVKTGL-------LEHWDNITKAKKPVIAAVNGYA 143
            F+AG D++          ++          LE+        KP IAAV G  
Sbjct: 76  HFSAGHDLRGGGPVPDKLTLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRC 128

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Length = 273

 Score =  127 bits (322), Expect = 2e-37
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 7/118 (5%)

Query: 30  IKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAA 89
            ++ +  +++ I  +       +  V +NRP+  NA     V+E+  A  +   D +V+ 
Sbjct: 4   RQWETLREYDEIKYEFYE---GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSV 60

Query: 90  IVLTGN-EKAFAAGADIKEMLNQTYAANVKTGLL---EHWDNITKAKKPVIAAVNGYA 143
           IVLTG  + AF +G D K+  +  Y    +   L   +    I    KPVIA V GYA
Sbjct: 61  IVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYA 118

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Length = 275

 Score =  127 bits (322), Expect = 2e-37
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 15/119 (12%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E+I V      K+V  VQLNRP+  NA+  A   E+    Q+  +DS   A+V++G  K
Sbjct: 2   YESIQVTSA--QKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGK 59

Query: 98  AFAAGADIKEMLNQT-------------YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            F +G D+ +M +               Y  ++ +   + +  I K  KPVIAA++G  
Sbjct: 60  MFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGC 118

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Length = 264

 Score =  125 bits (317), Expect = 7e-37
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 7/118 (5%)

Query: 26  HLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDS 85
           H+  ++  +      I + +      V  ++L RP+  NAL   LV E+  A+++   D 
Sbjct: 8   HMGTLEAQTQGPGSMIGITQAE---AVLTIELQRPERRNALNSQLVEELTQAIRKAG-DG 63

Query: 86  SVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           S  AIVLTG   AF AGAD+       +AA+    L+E    +  +  PV+ A+NG A
Sbjct: 64  SARAIVLTGQGTAFCAGADLSGD---AFAADYPDRLIELHKAMDASPMPVVGAINGPA 118

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Length = 254

 Score =  125 bits (316), Expect = 8e-37
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 6/113 (5%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           MS      + +++           L+RP+  NAL   LV  +   V    ++  V  +V 
Sbjct: 1   MSLSASLPLAIERRPA---AWTFTLSRPEKRNALSAELVEALIDGVDAAHREQ-VPLLVF 56

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTGLLEH--WDNITKAKKPVIAAVNGYA 143
            G  + F+AG D  +   Q+    +   +        +  +    +A  +G  
Sbjct: 57  AGAGRNFSAGFDFTDYETQSEGDLLLRMVRIEMLLQRVAGSPSLTLALAHGRN 109

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Length = 266

 Score =  125 bits (316), Expect = 1e-36
 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 9/115 (7%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           MS     ++  +  G    V  + +NRP++ NAL   L   +A A+ + DQ+  V  +VL
Sbjct: 1   MSL--HPHLNANLEG---GVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVL 55

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTGLLEH----WDNITKAKKPVIAAVNGYA 143
            G E  F AG D+K+ +      N              +  +  KP+I AV G A
Sbjct: 56  RGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIAVKGVA 110

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Length = 260

 Score =  124 bits (314), Expect = 2e-36
 Identities = 23/109 (21%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NE 96
            + +LV+       V +++   P  +N+L    ++E+  ++++ + D S   ++LT    
Sbjct: 2   SQRVLVEPDAGA-GVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRP 59

Query: 97  KAFAAGADIKEMLNQTY--AANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             F+AG D+ EM  ++    A     + E W  + ++   +++A+NG  
Sbjct: 60  GVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGAC 108

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Length = 440

 Score =  128 bits (322), Expect = 3e-36
 Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 30/137 (21%)

Query: 34  STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLT 93
             V+ E + +++      V  + + R   LNA     V ++  AV     D  V   +L 
Sbjct: 162 GEVEMEAVHLERRD---GVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLR 218

Query: 94  GN---------EKAFAAGADIKEM------------------LNQTYAANVKTGLLEHWD 126
           G          ++ F+AG ++K +                  +++     +       W 
Sbjct: 219 GGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDFLMRRELGYIHKLVRGVLTNDDRPGWW 278

Query: 127 NITKAKKPVIAAVNGYA 143
           +  + +KP +AAV+G+A
Sbjct: 279 HSPRIEKPWVAAVDGFA 295

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Length = 263

 Score =  123 bits (312), Expect = 4e-36
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 5/110 (4%)

Query: 37  KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
           K+EN+   +      +  V+++   S          E   A     +D     ++LTG+ 
Sbjct: 21  KYENLHFHRDENG--ILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSG 78

Query: 97  KAFAAGADIKEMLNQTYAANVKTGLLEH---WDNITKAKKPVIAAVNGYA 143
            A+ A  D   + + T          E      N+   + PVI+AVNG A
Sbjct: 79  DAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAA 128

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Length = 286

 Score =  122 bits (309), Expect = 2e-35
 Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 4/108 (3%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
           E +L+    +   V  + LNRP++ NAL +A+++ +  A     +D SV A+VL  + KA
Sbjct: 24  EPLLLQDRDER-GVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKA 82

Query: 99  FAAGADIKEMLNQTYAANVKTGLLEHWDN---ITKAKKPVIAAVNGYA 143
           F AG D+KEM  +      +       D    I +   PVIA V+G A
Sbjct: 83  FCAGHDLKEMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIA 130

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Length = 257

 Score =  121 bits (306), Expect = 3e-35
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E I  +  G    V  + LNRP  LNA  + + +EV  A++Q   D +V  +V+TG  +
Sbjct: 2   YETIRYEVKG---QVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGR 58

Query: 98  AFAAGADIKEMLNQTYAAN-VKTGLLEHWDNITKAKKPVIAAVNGYA 143
           AF AG D+  +  +    + +++        +   +KPV+AAVNG A
Sbjct: 59  AFCAGEDLSGVTEEMDHGDVLRSRYAPMMKALHHLEKPVVAAVNGAA 105

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Length = 261

 Score =  121 bits (306), Expect = 3e-35
 Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 9/113 (7%)

Query: 37  KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
           ++ +I+V K  ++    ++   +    N+L   ++ EV +A+     D S   ++L+   
Sbjct: 3   RYRDIVVRK--QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSK-LVLLSAVG 59

Query: 97  KAFAAGADIKEMLNQT------YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
             F  G D    + +        +  +   +    +   + KKP+I AVNG A
Sbjct: 60  SVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPA 112

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} Length = 265

 Score =  121 bits (306), Expect = 4e-35
 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
             +  +       V ++ L+ P + N+    L  ++ AA Q+ D D +V  IVLTG   A
Sbjct: 7   TELHEEIRD---GVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPA 63

Query: 99  FAAGADIKEMLNQTYAA-NVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           F +GA I        A  N             + + PVIAAVNG+A
Sbjct: 64  FCSGAQISAAAETFAAPRNPDFSASPVQPAAFELRTPVIAAVNGHA 109

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Length = 291

 Score =  121 bits (306), Expect = 5e-35
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 9/124 (7%)

Query: 26  HLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDS 85
           H   +    +  + +I+V K  ++    +V   R    NAL   ++ E+  A+     D 
Sbjct: 10  HSSGLVPRGSSTYRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAAD- 66

Query: 86  SVAAIVLTGNEKAFAAGADIKEMLNQT------YAANVKTGLLEHWDNITKAKKPVIAAV 139
               ++ +     F  G D    +          +  +   +    +   + KKP++ +V
Sbjct: 67  DSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSV 126

Query: 140 NGYA 143
           NG A
Sbjct: 127 NGPA 130

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Length = 257

 Score =  120 bits (302), Expect = 1e-34
 Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 5/109 (4%)

Query: 37  KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
           K+ENI +++ G    V LV ++              E+A        D     ++LTG  
Sbjct: 14  KYENIRLERDGG---VLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTG 70

Query: 97  KAFAAGADIKEMLNQTYAANVKTGLLEH--WDNITKAKKPVIAAVNGYA 143
            +F    D       T     +         +N+   + PVIAAVNG  
Sbjct: 71  PSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGPV 119

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} Length = 268

 Score =  119 bits (300), Expect = 3e-34
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 11/116 (9%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           MS     ++L +       VGL+ +NR    NA  + L++E+   +     D++V  IVL
Sbjct: 1   MS---LSDLLYEIQD---KVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVL 54

Query: 93  TGNEKAFAAGADIKEM---LNQTYAANVKTG--LLEHWDNITKAKKPVIAAVNGYA 143
             N K F+AGAD+  M    N T   N++    L     +I+++ KP IA V G A
Sbjct: 55  KANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIAMVQGAA 110

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} PDB: 3q1t_A Length = 272

 Score =  117 bits (295), Expect = 2e-33
 Identities = 22/115 (19%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           ++   F ++  +       V  + L+ P  LN++   +  ++A      D+D  V  +++
Sbjct: 7   LTYQDFPSLRFEP--GEHGVLNLVLDSPG-LNSVGPQMHRDLADVWPVIDRDPDVRVVLV 63

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTGLLEH----WDNITKAKKPVIAAVNGYA 143
            G  KAF++G   + +         +  ++        N+    KPV++A+ G A
Sbjct: 64  RGEGKAFSSGGSFELIDETIGDYEGRIRIMREARDLVLNLVNLDKPVVSAIRGPA 118

>3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Length = 263

 Score =  113 bits (286), Expect = 3e-32
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           MS      +  +      +   + L+ P+  N L   L + +  A++  + ++S+ +I+L
Sbjct: 1   MS---LSYVHTEIQN---DALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIIL 54

Query: 93  TGNEKA-FAAGADIKEMLNQT------YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
               +A F++G  ++++L             V   L      I  + K  +A +NGYA
Sbjct: 55  QSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTSPKVTVALINGYA 112

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Length = 267

 Score =  113 bits (284), Expect = 6e-32
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           MS V ++ I V       +V  +  +RP++ N + D L+ E    + Q +  + V  +VL
Sbjct: 1   MSLVTYQTIKVRFQA---SVCYITFHRPEANNTINDTLIEECLQVLNQCETST-VTVVVL 56

Query: 93  TGNEKAFAAGADIKEMLNQT----YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            G  + F  GAD +E+  +       A+ +  L + W  +       I+ V G  
Sbjct: 57  EGLPEVFCFGADFQEIYQEMKRGRKQASSQEPLYDLWMKLQTGPYVTISHVRGKV 111

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Length = 232

 Score =  111 bits (280), Expect = 1e-31
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 7/106 (6%)

Query: 39  ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA 98
           + +          V  + LN  K +NA+   ++    AA+ Q ++D   A +++TG    
Sbjct: 6   DLVSYHLDD---GVATLTLNNGK-VNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGI 59

Query: 99  FAAGADIKEMLNQTYAA-NVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            + G D+K M +   AA N+          +     P+I A  G+A
Sbjct: 60  LSGGYDLKVMTSSAEAAINLVAQGSTLARRMLSHPFPIIVACPGHA 105

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} Length = 233

 Score =  111 bits (279), Expect = 2e-31
 Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 11/113 (9%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           MS      +          +G+++++  K +N L   +   +  A+   D+D+ V A+V+
Sbjct: 3   MS----GPVTYTHDD---AIGVIRMDDGK-VNVLGPTMQQALNEAIDAADRDN-VGALVI 53

Query: 93  TGNEKAFAAGADIKEMLNQTY--AANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            GN + F+ G D+K + +     A ++  G  E    +    KPV+ A  G+A
Sbjct: 54  AGNHRVFSGGFDLKVLTSGEAKPAIDMLRGGFELSYRLLSYPKPVVIACTGHA 106

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Length = 255

 Score =  108 bits (273), Expect = 2e-30
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 7/106 (6%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
              I V+  G    V  ++L+RP+ LNA+   ++ E++  ++  + D SV A++LTG  +
Sbjct: 5   MNGISVEHDG---AVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGR 61

Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           AF +G D+        A             IT   KPVIA V+G A
Sbjct: 62  AFCSGGDLTGGDTAGAA----DAANRVVRAITSLPKPVIAGVHGAA 103

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Length = 264

 Score =  108 bits (273), Expect = 3e-30
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 7/111 (6%)

Query: 37  KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
           ++  +          V  +   R + LNA+  AL   +A   +  +    V A++L G  
Sbjct: 8   RYPGLAFAW--PRPGVLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEG 64

Query: 97  KAFAAGADIKEMLNQTYAANVKTGLLEHW----DNITKAKKPVIAAVNGYA 143
             F+AG     +     +      +               +PV+AAV   A
Sbjct: 65  GVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVAAVEKVA 115

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Length = 334

 Score =  109 bits (275), Expect = 5e-30
 Identities = 30/126 (23%), Positives = 43/126 (34%), Gaps = 21/126 (16%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-- 95
             +I   +   +     V  NRP+  NA     V E+   +        V  ++LTGN  
Sbjct: 54  LTDITYHRHVDD-ATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGP 112

Query: 96  -----EKAFAAGADIKEMLNQTY-------------AANVKTGLLEHWDNITKAKKPVIA 137
                  AF +G D +      Y             A   +  +LE    I    K VI 
Sbjct: 113 SPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVIC 172

Query: 138 AVNGYA 143
            VNG+A
Sbjct: 173 LVNGWA 178

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Length = 298

 Score =  108 bits (272), Expect = 6e-30
 Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 12/116 (10%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
            + +L +       V ++  NR   LNA    L +   AA+ + + D  +  IVLTG  +
Sbjct: 28  QDAVLYEAT--PGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGR 85

Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEH----------WDNITKAKKPVIAAVNGYA 143
            F AGA +                 +              +T  +KPVIAA+NG  
Sbjct: 86  GFCAGAYLGSADAAAGYDKTMAKAKDANLADLVGERPPHFVTMLRKPVIAAINGPC 141

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Length = 279

 Score =  106 bits (268), Expect = 2e-29
 Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 9/117 (7%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
             T ++ ++ V+       V  V L RP  LNAL     +++   + +  +  +V A+VL
Sbjct: 11  APTPEWRHLRVEITD---GVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVL 67

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTG--LLEHWDNITKA----KKPVIAAVNGYA 143
            G  + F +G D+ E++  T + +             + +A      PVIAA++G A
Sbjct: 68  AGEGRGFCSGGDVDEIIGATLSMDTARLLDFNRMTGQVVRAVRECPFPVIAALHGVA 124

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Length = 280

 Score =  104 bits (261), Expect = 2e-28
 Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 16/119 (13%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
            E I     G      ++ L  P +LNAL       +   ++  D++  V   ++  + +
Sbjct: 8   NEKISYRIEGP---FFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGR 64

Query: 98  AFAAGADIKEMLNQT-------------YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            F++GAD K +                 + +N     +   D   K  K +I  +NG A
Sbjct: 65  FFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPA 123

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Length = 556

 Score =  107 bits (269), Expect = 2e-28
 Identities = 21/125 (16%), Positives = 49/125 (39%), Gaps = 21/125 (16%)

Query: 37  KFENILVDKVGKNKNVGLVQLNRPK----------SLNALCDALVSEVAAAVQQ--FDQD 84
           ++++  +   G    V  + ++  +           LN+    +  E+  A+Q+  F+  
Sbjct: 19  QYKHWKLSFNG---PVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHP 75

Query: 85  SSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEH------WDNITKAKKPVIAA 138
                ++ +  ++ F +GA+I  +   T+A  V      +       D+   +    +AA
Sbjct: 76  EVRTVVLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAA 135

Query: 139 VNGYA 143
           VNG  
Sbjct: 136 VNGAC 140

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Length = 263

 Score =  103 bits (260), Expect = 2e-28
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 12/119 (10%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           MS    + +L + +  ++ V  + L R  + + L  A+++ +  A+++   D  V  +V+
Sbjct: 1   MSL-SQDGLLGEVL--SEGVLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVI 56

Query: 93  TGNEKAFAAGADIKEMLNQT--------YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            G  + F AG D+KE+            +  ++         ++    KP IA V G A
Sbjct: 57  HGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALMLDLAHCPKPTIALVEGIA 115

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Length = 305

 Score =  102 bits (257), Expect = 1e-27
 Identities = 21/151 (13%), Positives = 45/151 (29%), Gaps = 19/151 (12%)

Query: 11  TSKHLFNNGSSIQAAHLYIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLN----AL 66
            S H  ++ S    +   +  ++ T     + +      ++V  + ++   ++N      
Sbjct: 2   GSSHHHHHHSQDPNSMSAVQPFIRTNIGSTLRII-EEPQRDVYWIHMHADLAINPGRACF 60

Query: 67  CDALVSEVAAAVQQFDQ-----DSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGL 121
              LV ++        Q           +VL  +   F  G D+          +    L
Sbjct: 61  STRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLL 120

Query: 122 ---------LEHWDNITKAKKPVIAAVNGYA 143
                    +  +     A+   IA V G A
Sbjct: 121 DYAQRCVRGVHAFHVGLGARAHSIALVQGNA 151

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Length = 280

 Score =  100 bits (250), Expect = 8e-27
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 13/119 (10%)

Query: 31  KYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAI 90
           + M    FE ++V        +  +  NRPK  NA+   +  E+  A++   +D S+   
Sbjct: 21  QSMG---FETLVVTSED---GITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-IT 73

Query: 91  VLTGNEKAFAAGADIKEMLNQT------YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           VLTGN   +++G D+    +         A N    L E         KP+IA VNG A
Sbjct: 74  VLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPA 132

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Length = 333

 Score =  100 bits (251), Expect = 1e-26
 Identities = 23/143 (16%), Positives = 51/143 (35%), Gaps = 35/143 (24%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           +     + +  +   +   V  +  NRP+  NA+      E++A V++ D D  V  I++
Sbjct: 29  VDFDNLKTMTYEVTDR---VARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILV 85

Query: 93  TGNEKAFAAGADIKEMLNQTYAA--------------------------------NVKTG 120
           +G  + F AG D+      + +A                                 + + 
Sbjct: 86  SGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSR 145

Query: 121 LLEHWDNITKAKKPVIAAVNGYA 143
            +  + ++    KP +  ++GY 
Sbjct: 146 FVRGFASLMHCDKPTVVKIHGYC 168

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} Length = 267

 Score = 96.5 bits (241), Expect = 1e-25
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 10/118 (8%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           M  +          G    V  + LN P + NAL  ALVS++   ++    D +V  +VL
Sbjct: 5   MDALVDYAGPAATGG---PVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVL 61

Query: 93  TGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDN-------ITKAKKPVIAAVNGYA 143
                 F AGAD+ E  +    ++     +E           I +++ PVIAA++G+ 
Sbjct: 62  AHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGHV 119

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Length = 742

 Score = 79.6 bits (197), Expect = 1e-18
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)

Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
           ++ +++L  P  +NA+   ++ EV   +Q+   D +V AIV+ G    F AGADI     
Sbjct: 30  SLAMIRLCNP-PVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSA 88

Query: 111 QTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            T    + + +    D I + +KPV+AA+ G A
Sbjct: 89  FTPGLALGSLV----DEIQRYQKPVLAAIQGVA 117

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Length = 715

 Score = 77.3 bits (191), Expect = 1e-17
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 51  NVGLVQLNRP-KSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEM- 108
            +  ++ +   +S+N      ++E+  AV     D+SV  ++++  +  F  GADI E  
Sbjct: 16  GIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFV 75

Query: 109 -LNQTYAANVKTGLLEHW---DNITKAKKPVIAAVNGYA 143
              +   A +  G LE      +      P +AA+NG A
Sbjct: 76  ENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAINGIA 114

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Length = 725

 Score = 76.9 bits (190), Expect = 1e-17
 Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 8/116 (6%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           M +      +++  G    V ++ L  P  +N+L   ++  + +  ++    + V AIV+
Sbjct: 1   MDSRTKGKTVMEVGGDG--VAVITLINP-PVNSLSFDVLYNLKSNYEEALSRNDVKAIVI 57

Query: 93  TGNEKAFAAGADIKEML-----NQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           TG +  F+ G DI         N          +    D +  A+KP +AA++G A
Sbjct: 58  TGAKGRFSGGFDISGFGEMQKGNVKEPKAGYISIDIITDLLEAARKPSVAAIDGLA 113

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Length = 407

 Score = 75.9 bits (187), Expect = 3e-17
 Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 20/146 (13%)

Query: 17  NNGSSIQAAHLYIIKYMSTVKF--------ENILVDKVG--KNKNVGLVQLNRPKSLNAL 66
           ++  S    +LY   +M+ +          +N++   +     K VG+V LN  K+LNAL
Sbjct: 7   HHHHSSGRENLYFQGHMTNLVDKAAHSFATQNVVFQTLATASGKLVGVVTLNVEKALNAL 66

Query: 67  CDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKEMLNQTYAANVKTGLL--- 122
              +V  +   +  + +D  +A +VL G+ EKAF AG D++ + + + AA  +   +   
Sbjct: 67  DLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKV 126

Query: 123 ----EHWDN--ITKAKKPVIAAVNGY 142
               E+  +  +    KPV+   +G 
Sbjct: 127 FFEEEYRLDYLLHTYGKPVLVWGDGI 152

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Length = 363

 Score = 74.3 bits (183), Expect = 9e-17
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 12/117 (10%)

Query: 33  MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
           M+    E +L+ K G     G++ LNRPK LNAL   ++ ++   +++++QD     I++
Sbjct: 1   MTDAA-EEVLLGKKG---CTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIII 56

Query: 93  TGN-EKAFAAGADIKEMLNQTYAANVKTGL----LEHWDN--ITKAKKPVIAAVNGY 142
            G   KAF AG DI+ ++++   A  K        E+  N  +   +KP +A ++G 
Sbjct: 57  KGAGGKAFCAGGDIR-VISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGI 112

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	143
4fzw_A	258	2,3-dehydroadipyl-COA hydratase; structural genomi	99.95
4fzw_C	274	1,2-epoxyphenylacetyl-COA isomerase; structural ge	99.94
3hrx_A	254	Probable enoyl-COA hydratase; the spiral fold, the	99.94
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	99.93
4hdt_A	353	3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti	99.93
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	99.93
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	99.93
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	99.93
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	99.93
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	99.93
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	99.93
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 112 structural	99.93
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	99.92
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	99.92
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	99.92
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	99.92
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	99.92
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	99.92
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	99.92
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	99.92
3t3w_A	279	Enoyl-COA hydratase; ssgcid, structural genomics,	99.92
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	99.92
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	99.92
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	99.92
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	99.92
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	99.92
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	99.92
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	99.92
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	99.92
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	99.92
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	99.91
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	99.91
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	99.91
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	99.91
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	99.91
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	99.91
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	99.91
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	99.91
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	99.91
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	99.91
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	99.91
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	99.91
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	99.91
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	99.91
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	99.91
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	99.91
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	99.91
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	99.91
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	99.91
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	99.91
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	99.91
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	99.91
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	99.91
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	99.91
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	99.9
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	99.9
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	99.9
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	99.9
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	99.9
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	99.9
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	99.9
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	99.9
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	99.9
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	99.89
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	99.89
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	99.89
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	99.89
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	99.89
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	99.89
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	99.89
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	99.89
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	99.89
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	99.86
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	99.86
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	99.86
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	99.83
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	99.83
3bf0_A	593	Protease 4; bacterial, hydrolase, inner membrane,	98.84
3rst_A	240	Signal peptide peptidase SPPA; alpha/beta protein	98.75
3viv_A	230	441AA long hypothetical NFED protein; protein-pept	98.23
2f9y_B	304	Acetyl-coenzyme A carboxylase carboxyl transferas	97.79
1y7o_A	218	ATP-dependent CLP protease proteolytic subunit; hy	96.45
2f9i_A	327	Acetyl-coenzyme A carboxylase carboxyl transferase	95.05
2f9y_A	339	Acetyl-COA carboxylase, carboxyltransferase alpha;	94.34
2cby_A	208	ATP-dependent CLP protease proteolytic subunit 1;	93.82
1yg6_A	193	ATP-dependent CLP protease proteolytic subunit; en	80.61

>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=99.95  E-value=1.5e-27  Score=181.99  Aligned_cols=103  Identities=38%  Similarity=0.613  Sum_probs=91.8

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhH
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANV  117 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~  117 (143)
                      ++.+.+++++   +|++||||||+++|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus         4 ms~l~ve~~~---~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~   80 (258)
T 4fzw_A            4 MSELIVSRQQ---RVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAATL   80 (258)
T ss_dssp             -CEEEEEEET---TEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHHHHH
T ss_pred             CCcEEEEEEC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhhhHH
Confidence            4569999987   9999999999999999999999999999999999999999999999999999999998765544433


Q ss_pred             HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         118 KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       118 ~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ......++.++..+|||+||+|||+|
T Consensus        81 ~~~~~~~~~~l~~~~kPvIAav~G~a  106 (258)
T 4fzw_A           81 NDTRPQLWARLQAFNKPLIAAVNGYA  106 (258)
T ss_dssp             TCSHHHHHHHHHTCCSCEEEEECSEE
T ss_pred             HhHHHHHHHHHHHCCCCEEEEEcCcc
Confidence            35566788999999999999999986

>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=99.94  E-value=5.4e-27  Score=180.35  Aligned_cols=107  Identities=30%  Similarity=0.432  Sum_probs=84.5

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY  113 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~  113 (143)
                      +++.++.|.++.++   +|++||||||+++|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.....
T Consensus        10 ~GsM~e~il~~~~~---gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~   86 (274)
T 4fzw_C           10 HGSMMEFILSHVEK---GVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPT   86 (274)
T ss_dssp             ------CEEEEEET---TEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC-------
T ss_pred             cccccccEEEEEEC---CEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhcccc
Confidence            45667889999987   999999999999999999999999999999999999999999999999999999998754322


Q ss_pred             hh------hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AA------NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~------~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..      .....+..++.+|.++||||||+|||+|
T Consensus        87 ~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav~G~a  122 (274)
T 4fzw_C           87 GPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVA  122 (274)
T ss_dssp             --CCCHHHHHHHTHHHHHHHHHHCSSCEEEEECSCE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHCCCCEEEEECCce
Confidence            11      1123455677899999999999999986

>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}

Probab=99.94  E-value=8.1e-27  Score=177.38  Aligned_cols=100  Identities=31%  Similarity=0.476  Sum_probs=88.6

Q ss_pred             EEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh-hHHh
Q psy9280          41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA-NVKT  119 (143)
Q Consensus        41 v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~-~~~~  119 (143)
                      |.+|+++   +|++||||||+++|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... ....
T Consensus         2 vl~E~~d---gVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~   78 (254)
T 3hrx_A            2 VLKERQD---GVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLR   78 (254)
T ss_dssp             EEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTH
T ss_pred             eEEEEEC---CEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchhhHHHHH
Confidence            6788887   99999999999999999999999999999999999999999999999999999999986543322 2225


Q ss_pred             HHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         120 GLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       120 ~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .+...+.+|..+||||||+|||+|
T Consensus        79 ~~~~~~~~l~~~~kPvIAav~G~a  102 (254)
T 3hrx_A           79 RYNRVVEALSGLEKPLVVAVNGVA  102 (254)
T ss_dssp             HHHHHHHHHHTCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHhCCCCEEEEECCEe
Confidence            667788999999999999999986

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0

Probab=99.93  E-value=5.2e-26  Score=174.37  Aligned_cols=105  Identities=31%  Similarity=0.409  Sum_probs=90.8

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh--
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY--  113 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~--  113 (143)
                      |+|+.|.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.....  
T Consensus         1 M~~~~v~~~~~~---~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~   77 (268)
T 3i47_A            1 MSLSDLLYEIQD---KVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFT   77 (268)
T ss_dssp             -CCCSEEEEEET---TEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCC
T ss_pred             CCCCEEEEEEEC---CEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhcccccc
Confidence            457889999987   999999999999999999999999999999999999999999999999999999999865321  


Q ss_pred             -hhh--HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 -AAN--VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 -~~~--~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       ...  ....+..++.++..+||||||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  110 (268)
T 3i47_A           78 EEENLEDSLVLGNLMYSISQSPKPTIAMVQGAA  110 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence             111  123456778899999999999999986

>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}

Probab=99.93  E-value=8e-26  Score=179.35  Aligned_cols=107  Identities=31%  Similarity=0.512  Sum_probs=90.1

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQT  112 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~  112 (143)
                      .+..++.|.++++|   +|++||||||+++|+||.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++....
T Consensus         4 ~t~~~e~vl~e~~~---~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~   80 (353)
T 4hdt_A            4 VTAKNEDVLVNVEG---GVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSA   80 (353)
T ss_dssp             ----CCSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHH
T ss_pred             ccCCCCcEEEEEEC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhcc
Confidence            34556889999998   9999999999999999999999999999999999999999999987 7999999999986543


Q ss_pred             hhh-----hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 YAA-----NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~~~-----~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...     .+....++++.++.++|||+||+|||+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a  116 (353)
T 4hdt_A           81 KADGAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIV  116 (353)
T ss_dssp             HTTSHHHHHHHHHHHHHHHHHHHCSSCEEEEECBEE
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHCCCCEEEEeECce
Confidence            221     1123455677899999999999999986

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}

Probab=99.93  E-value=7.1e-26  Score=173.18  Aligned_cols=105  Identities=46%  Similarity=0.742  Sum_probs=91.6

Q ss_pred             CCcccEEEEEecCCCc-EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKN-VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~-V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~  114 (143)
                      |.++.+.+++++   + |++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++......
T Consensus         6 m~~~~i~~~~~~---~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~   82 (263)
T 3moy_A            6 TTYTTIATSRPV---AGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPH   82 (263)
T ss_dssp             CCCSSEEEECCS---TTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHH
T ss_pred             CCCCeEEEEEeC---CeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCch
Confidence            446789999876   6 999999999999999999999999999999999999999999999999999999998765433


Q ss_pred             hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ......+...+.++..+||||||+|||+|
T Consensus        83 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a  111 (263)
T 3moy_A           83 QARERNLLSGWDSLTQVRKPIVAAVAGYA  111 (263)
T ss_dssp             HHHHTTTTHHHHHHTTCCSCEEEEECBEE
T ss_pred             hHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence            32234455678899999999999999986

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}

Probab=99.93  E-value=1.4e-25  Score=171.63  Aligned_cols=105  Identities=32%  Similarity=0.478  Sum_probs=90.5

Q ss_pred             CCcccEEEE-EecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhh
Q psy9280          36 VKFENILVD-KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTY  113 (143)
Q Consensus        36 ~~~~~v~ve-~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~  113 (143)
                      |.|+.+.++ .++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++.....
T Consensus         5 m~~~~v~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~   81 (265)
T 3kqf_A            5 LQLQNISVDYATP---HVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNE   81 (265)
T ss_dssp             --CCSEEEECCST---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCH
T ss_pred             ccCCeEEEEEeeC---CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCH
Confidence            457889999 666   9999999999999999999999999999999999999999999998 99999999999876433


Q ss_pred             hhh--HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AAN--VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~~--~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...  +...+..++.++.++||||||+|||+|
T Consensus        82 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  113 (265)
T 3kqf_A           82 EQVRHAVSMIRTTMEMVEQLPQPVIAAINGIA  113 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            221  224566778999999999999999986

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}

Probab=99.93  E-value=3.1e-25  Score=169.39  Aligned_cols=103  Identities=28%  Similarity=0.462  Sum_probs=89.4

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh-
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA-  115 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~-  115 (143)
                      .++.+.+++++   +|++|+||||++ |+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... 
T Consensus         4 m~~~v~~~~~~---~v~~itlnrp~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~   79 (261)
T 3pea_A            4 MLKFLSVRVED---HIAVATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQ   79 (261)
T ss_dssp             CCSSEEEEEET---TEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHH
T ss_pred             cccceEEEEEC---CEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhH
Confidence            46789999987   999999999998 9999999999999999999999999999999999999999999987543221 


Q ss_pred             --hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 --NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 --~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                        .+....+.++.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  109 (261)
T 3pea_A           80 ATELAQLGQVTFERVEKCSKPVIAAIHGAA  109 (261)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence              1223345577899999999999999986

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}

Probab=99.93  E-value=1.8e-25  Score=172.11  Aligned_cols=106  Identities=26%  Similarity=0.431  Sum_probs=92.3

Q ss_pred             CCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh
Q psy9280          35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        35 ~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~  114 (143)
                      ...|+.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++......
T Consensus        13 ~~~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~   89 (279)
T 3g64_A           13 TPEWRHLRVEITD---GVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLS   89 (279)
T ss_dssp             CSCCSSEEEEEET---TEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTT
T ss_pred             CCCCCeEEEEEEC---CEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhcccc
Confidence            3557889999987   9999999999999999999999999999999999999999999999999999999998754322


Q ss_pred             h------hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A------NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~------~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .      .+...+..++.++..+||||||+|||+|
T Consensus        90 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  124 (279)
T 3g64_A           90 MDTARLLDFNRMTGQVVRAVRECPFPVIAALHGVA  124 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEE
T ss_pred             chhhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCee
Confidence            1      1123456778899999999999999986

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A

Probab=99.93  E-value=1.5e-25  Score=176.52  Aligned_cols=107  Identities=21%  Similarity=0.416  Sum_probs=86.0

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY  113 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~  113 (143)
                      ..+.|+.|.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.....
T Consensus        30 ~~~~~~~i~~e~~~---~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~  106 (333)
T 3njd_A           30 DFDNLKTMTYEVTD---RVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSS  106 (333)
T ss_dssp             CTTSCSSEEEEEET---TEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------
T ss_pred             CCCCCCeEEEEEEC---CEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhccc
Confidence            44678899999987   999999999999999999999999999999999999999999999999999999999864321


Q ss_pred             hh--------------------------------hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AA--------------------------------NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~--------------------------------~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..                                .+...+...+.+|.++||||||+|||+|
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a  168 (333)
T 3njd_A          107 SAGGGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYC  168 (333)
T ss_dssp             ------CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEE
T ss_pred             ccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence            10                                0113345567889999999999999986

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}

Probab=99.93  E-value=1.4e-25  Score=171.79  Aligned_cols=104  Identities=30%  Similarity=0.427  Sum_probs=90.6

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhh---hhhh
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEML---NQTY  113 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~---~~~~  113 (143)
                      .++.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.   ....
T Consensus         3 ~~~~v~~~~~~---~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~   79 (266)
T 3fdu_A            3 LHPHLNANLEG---GVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN   79 (266)
T ss_dssp             CCTTEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCC
T ss_pred             CCCeEEEEEEC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccc
Confidence            46789999987   99999999999999999999999999999999999999999999999999999999987   3222


Q ss_pred             hh-hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AA-NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~-~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .. .....+..++.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  110 (266)
T 3fdu_A           80 AGPAGQVPPFVLLKSAARLSKPLIIAVKGVA  110 (266)
T ss_dssp             CSCGGGSHHHHHHHHHHHCCSCEEEEECSEE
T ss_pred             hhhHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence            11 1224566778899999999999999986

>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}

Probab=99.93  E-value=2.5e-25  Score=170.11  Aligned_cols=105  Identities=20%  Similarity=0.329  Sum_probs=90.1

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCc-cCCCCcchhhh--h-
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAF-AAGADIKEMLN--Q-  111 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F-saG~Dl~~~~~--~-  111 (143)
                      |+++.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|+.| |+|+|++++..  . 
T Consensus         1 Ms~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~   77 (263)
T 3lke_A            1 MSLSYVHTEIQN---DALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASD   77 (263)
T ss_dssp             --CCSEEEEECS---SEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHC
T ss_pred             CCCcEEEEEEEC---CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhccc
Confidence            456789999987   9999999999989999999999999999999999999999999999999 99999999876  1 


Q ss_pred             -hhhh--hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         112 -TYAA--NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       112 -~~~~--~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       ....  .+...+.+++.++..+|||+||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  112 (263)
T 3lke_A           78 QSDVRLREVLHVLNHCVLEIFTSPKVTVALINGYA  112 (263)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHTCSSEEEEEECSEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence             1111  1224566778999999999999999986

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}

Probab=99.92  E-value=1.2e-25  Score=172.34  Aligned_cols=106  Identities=25%  Similarity=0.429  Sum_probs=89.6

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY  113 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~  113 (143)
                      +.|.|+.+.+++++   +|++|+||||+++|+||.+|+++|.+++++++.| ++|+|||||.|++||+|+|++++.....
T Consensus         2 ~~m~~~~i~~~~~~---~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~   77 (267)
T 3hp0_A            2 SLVTYQTIKVRFQA---SVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMK   77 (267)
T ss_dssp             ---CCSSEEEEEET---TEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTT
T ss_pred             CCCCCceEEEEEEC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhccc
Confidence            34567889999987   9999999999999999999999999999999986 5999999999999999999999875421


Q ss_pred             hh----hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AA----NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~----~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..    .....+..++.++..+||||||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  111 (267)
T 3hp0_A           78 RGRKQASSQEPLYDLWMKLQTGPYVTISHVRGKV  111 (267)
T ss_dssp             TTCCSCCCCHHHHHHHHHHHHSSSEEEEEECSEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCCEEEEECCEE
Confidence            11    1124566788999999999999999986

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*

Probab=99.92  E-value=1.3e-25  Score=173.05  Aligned_cols=105  Identities=44%  Similarity=0.789  Sum_probs=89.6

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      |.++.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus        22 m~~~~v~~~~~~---~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~   98 (278)
T 3h81_A           22 MTYETILVERDQ---RVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFAD   98 (278)
T ss_dssp             -CCSSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHH
T ss_pred             CCCCeEEEEEEC---CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhh
Confidence            557889999987   89999999999999999999999999999999999999999999999999999999987654332


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....+...+.++..+||||||+|||+|
T Consensus        99 ~~~~~~~~~~~~l~~~~kPvIAav~G~a  126 (278)
T 3h81_A           99 AFTADFFATWGKLAAVRTPTIAAVAGYA  126 (278)
T ss_dssp             HHHHTTTGGGHHHHTCCSCEEEEECBEE
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            2212222236889999999999999986

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}

Probab=99.92  E-value=1.9e-25  Score=171.90  Aligned_cols=106  Identities=29%  Similarity=0.454  Sum_probs=91.5

Q ss_pred             ccCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh
Q psy9280          33 MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT  112 (143)
Q Consensus        33 ~~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~  112 (143)
                      |+.|+++.+.+++++   +|++|+||||+++|+|+.+|+++|.++++++  |+++|+|||||.|++||+|+|++++....
T Consensus        10 ~~~m~~~~v~~~~~~---~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~   84 (275)
T 3hin_A           10 ATIADPSTLVVDTVG---PVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERD   84 (275)
T ss_dssp             CCCCCGGGEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCC
T ss_pred             cccCCCCeEEEEEEC---CEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccC
Confidence            455778899999987   9999999999999999999999999999999  57899999999999999999999986543


Q ss_pred             hhhh--HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 YAAN--VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~~~~--~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ....  ....+..++.++.++||||||+|||+|
T Consensus        85 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  117 (275)
T 3hin_A           85 ATEGLVHSQTWHRVFDKIQYCRVPVIAALKGAV  117 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEE
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            2221  124566778999999999999999986

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}

Probab=99.92  E-value=1.3e-25  Score=170.89  Aligned_cols=105  Identities=33%  Similarity=0.482  Sum_probs=90.5

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      .+|..+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus         3 ~~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~   79 (256)
T 3qmj_A            3 GSMVTLQIDDDN---RVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDP   79 (256)
T ss_dssp             ---CCEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSS
T ss_pred             CCcceEEEEEEC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccch
Confidence            456789999987   99999999999999999999999999999999999999999999999999999999987543322


Q ss_pred             h---HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 N---VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~---~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .   ....+..++.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  110 (256)
T 3qmj_A           80 NFSEGKFGFRGLIKALAGFPKPLICAVNGLG  110 (256)
T ss_dssp             SCCCCSSHHHHHHHHHHHCCSCEEEEECSEE
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            1   124567788999999999999999986

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A

Probab=99.92  E-value=4.4e-25  Score=170.07  Aligned_cols=107  Identities=21%  Similarity=0.220  Sum_probs=88.9

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY  113 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~  113 (143)
                      +.|.|+.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.....
T Consensus         4 ~~m~~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~   80 (280)
T 1pjh_A            4 EIRQNEKISYRIEG---PFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQG   80 (280)
T ss_dssp             -CCCBTTEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC---
T ss_pred             ccccCCceEEEEEC---CEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhccc
Confidence            34667889999987   999999999999999999999999999999999999999999999999999999998753211


Q ss_pred             -h-----h---hHH----hHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 -A-----A---NVK----TGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 -~-----~---~~~----~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       .     .   .+.    .....++.++..+||||||+|||+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  123 (280)
T 1pjh_A           81 DDTNKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPA  123 (280)
T ss_dssp             ----CCSSHHHHHHHHTHHHHHHHHHHHHHCCSEEEEEECSCE
T ss_pred             ccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence             0     1   011    1124667889999999999999986

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}

Probab=99.92  E-value=4.3e-25  Score=168.17  Aligned_cols=102  Identities=34%  Similarity=0.518  Sum_probs=83.8

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHH
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVK  118 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~  118 (143)
                      +.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++........+.
T Consensus         3 ~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~   79 (257)
T 2ej5_A            3 ETIRYEVKG---QVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDVL   79 (257)
T ss_dssp             SSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHHHHH
T ss_pred             CceEEEeEC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccchhHHH
Confidence            578888887   99999999999999999999999999999999999999999999999999999999886533211111


Q ss_pred             h-HHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         119 T-GLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       119 ~-~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      . .+.+++.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~l~~~~kPvIAav~G~a  105 (257)
T 2ej5_A           80 RSRYAPMMKALHHLEKPVVAAVNGAA  105 (257)
T ss_dssp             HHTHHHHHHHHHHCCSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHhCCCCEEEEECccc
Confidence            2 256778899999999999999986

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}

Probab=99.92  E-value=7.4e-25  Score=168.72  Aligned_cols=102  Identities=28%  Similarity=0.429  Sum_probs=89.9

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh-
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN-  116 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~-  116 (143)
                      ++.+.+++++   +|++|+||||++ |+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++........ 
T Consensus        23 ~~~v~~~~~~---~Va~ItlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~   98 (277)
T 4di1_A           23 NEFVSVVADQ---GLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNAPEAD   98 (277)
T ss_dssp             CCSEEEEEET---TEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCHHHHH
T ss_pred             CceEEEEEEC---CEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccChHHHH
Confidence            4679999987   999999999998 99999999999999999999999999999999999999999999876533221 


Q ss_pred             -HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 -VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 -~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       +...+..++.++..+||||||+|||+|
T Consensus        99 ~~~~~~~~~~~~l~~~~kPvIAav~G~a  126 (277)
T 4di1_A           99 TAARVRLEAIDAVAAIPKPTVAAVTGYA  126 (277)
T ss_dssp             HHHHHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCeE
Confidence             224566778999999999999999986

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}

Probab=99.92  E-value=3.4e-25  Score=168.68  Aligned_cols=101  Identities=32%  Similarity=0.453  Sum_probs=87.9

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      .+|+.+.+++++   +|++|+||||+++|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...    
T Consensus         3 ~~~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----   75 (255)
T 3p5m_A            3 GSMNGISVEHDG---AVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTA----   75 (255)
T ss_dssp             CCBTTEEEEEET---TEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHH----
T ss_pred             CCCceEEEEEEC---CEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcch----
Confidence            346679999987   9999999999999999999999999999999999999999999999999999999998731    


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .+...+..++.++..+||||||+|||+|
T Consensus        76 ~~~~~~~~~~~~l~~~~kPvIAav~G~a  103 (255)
T 3p5m_A           76 GAADAANRVVRAITSLPKPVIAGVHGAA  103 (255)
T ss_dssp             HHHHHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEeCCee
Confidence            2335567788999999999999999986

>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A

Probab=99.92  E-value=5.3e-25  Score=169.60  Aligned_cols=105  Identities=30%  Similarity=0.295  Sum_probs=85.3

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh-
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA-  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~-  114 (143)
                      +.|+.+.+++++   +|++|+||||+++|+||.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++...... 
T Consensus        17 ~~~~~v~~~~~~---~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~   93 (279)
T 3t3w_A           17 RTEMYIDYDVSD---RIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKL   93 (279)
T ss_dssp             --CCSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------C
T ss_pred             ccCCeEEEEEEC---CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhccccc
Confidence            456789999987   9999999999999999999999999999999999999999999999999999999998654211 


Q ss_pred             ---hhH---HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ---ANV---KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ---~~~---~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                         ...   ...+.+++.++..+|||+||+|||+|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  128 (279)
T 3t3w_A           94 TLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRC  128 (279)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHCSSCEEEEECSEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeE
Confidence               111   12345667899999999999999986

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}

Probab=99.92  E-value=5.4e-25  Score=170.13  Aligned_cols=100  Identities=34%  Similarity=0.492  Sum_probs=87.9

Q ss_pred             EEEEEe--cCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh---
Q psy9280          41 ILVDKV--GKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA---  115 (143)
Q Consensus        41 v~ve~~--~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~---  115 (143)
                      |.++++  +   +|++|+||||+++|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.......   
T Consensus        26 v~~~~~~~~---~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~  102 (286)
T 3myb_A           26 LLLQDRDER---GVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYE  102 (286)
T ss_dssp             SEEEEECTT---SEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHH
T ss_pred             EEEEEecCC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHHHHH
Confidence            889988  6   99999999999999999999999999999999999999999999999999999999987522111   


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .+...+..++.++..+||||||+|||+|
T Consensus       103 ~~~~~~~~~~~~l~~~~kPvIAav~G~a  130 (286)
T 3myb_A          103 KLFARCTDVMLAIQRLPAPVIARVHGIA  130 (286)
T ss_dssp             HHHHHHHHHHHHHHHSSSCEEEEECSCE
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEECCee
Confidence            1224566778999999999999999986

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}

Probab=99.92  E-value=9.3e-25  Score=168.07  Aligned_cols=102  Identities=33%  Similarity=0.433  Sum_probs=89.4

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh--
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN--  116 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~--  116 (143)
                      +.+.+++++   +|++|+||||++.|+|+.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++........  
T Consensus        28 ~~v~~~~~~---~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~  104 (276)
T 3rrv_A           28 TEIDVRADG---ALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLR  104 (276)
T ss_dssp             TTEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHH
T ss_pred             CeEEEEEEC---CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHH
Confidence            579999987   999999999999999999999999999999999999999999999999999999999875432211  


Q ss_pred             --HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 --VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 --~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                        ....+..++.++..+||||||+|||+|
T Consensus       105 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a  133 (276)
T 3rrv_A          105 AKTIRDGREIVLGMARCRIPVVAAVNGPA  133 (276)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCEEEEECSCE
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECcee
Confidence              124456778899999999999999986

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*

Probab=99.92  E-value=8.1e-25  Score=167.66  Aligned_cols=102  Identities=30%  Similarity=0.400  Sum_probs=87.8

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh----hh
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT----YA  114 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~----~~  114 (143)
                      +.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....    ..
T Consensus         3 ~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~   79 (269)
T 1nzy_A            3 EAIGHRVED---GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVR   79 (269)
T ss_dssp             SSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHH
T ss_pred             ceEEEEEEC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccChH
Confidence            458888887   99999999999999999999999999999999999999999999999999999999886531    11


Q ss_pred             h---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .   .+...+++++.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  111 (269)
T 1nzy_A           80 DHFRIAALWWHQMIHKIIRVKRPVLAAINGVA  111 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            1   1123456777899999999999999986

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A

Probab=99.92  E-value=6.6e-25  Score=167.24  Aligned_cols=103  Identities=45%  Similarity=0.718  Sum_probs=88.1

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh-hh
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY-AA  115 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~-~~  115 (143)
                      .+..+.++.++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..... ..
T Consensus         3 ~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~   79 (258)
T 2pbp_A            3 EFVSIAARQEG---AVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRL   79 (258)
T ss_dssp             -CCSEEEEEET---TEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHH
T ss_pred             CcceEEEEeeC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhH
Confidence            35678899887   999999999999999999999999999999999999999999999999999999999865332 11


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .+...+ +.+.++..+||||||+|||+|
T Consensus        80 ~~~~~~-~~~~~l~~~~kPvIAav~G~a  106 (258)
T 2pbp_A           80 EWLNQF-ADWDRLSIVKTPMIAAVNGLA  106 (258)
T ss_dssp             HHHCTT-HHHHHHHTCCSCEEEEECSEE
T ss_pred             HHHHHH-HHHHHHHhCCCCEEEEEcCEE
Confidence            112233 667889999999999999986

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}

Probab=99.92  E-value=6.8e-25  Score=169.84  Aligned_cols=103  Identities=29%  Similarity=0.351  Sum_probs=83.5

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh--
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA--  115 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~--  115 (143)
                      ...+.++.++   +|++|+||||+++|+||.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.......  
T Consensus        23 ~~~v~~~~~~---~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~   99 (290)
T 3sll_A           23 SFVLVDRPRP---EIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGL   99 (290)
T ss_dssp             CCEEEEEEET---TEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTC
T ss_pred             CeEEEEEEEC---CEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccc
Confidence            3568888887   99999999999999999999999999999999999999999999999999999999886532111  


Q ss_pred             -------hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 -------NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 -------~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                             .....+..++.++..+||||||+|||+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  134 (290)
T 3sll_A          100 TQPTIALRSMELLDEVILTLRRMHQPVIAAINGAA  134 (290)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             cchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence                   1224566778999999999999999986

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*

Probab=99.92  E-value=2.1e-24  Score=163.78  Aligned_cols=100  Identities=28%  Similarity=0.521  Sum_probs=85.8

Q ss_pred             EEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEc-CCCCccCCCCcchhhhhhhhh---h
Q psy9280          41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEMLNQTYAA---N  116 (143)
Q Consensus        41 v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg-~g~~FsaG~Dl~~~~~~~~~~---~  116 (143)
                      +.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+||||| .|++||+|+|++++.......   .
T Consensus         2 v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~   78 (250)
T 2a7k_A            2 VFEENSD---EVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEE   78 (250)
T ss_dssp             EEEEEET---TEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHH
T ss_pred             eEEEeeC---CEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHH
Confidence            5677776   89999999999999999999999999999999999999999999 899999999999986532211   1


Q ss_pred             HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 ~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +...+++++.++..+||||||+|||+|
T Consensus        79 ~~~~~~~~~~~i~~~~kPvIAav~G~a  105 (250)
T 2a7k_A           79 WIDRVIDLYQAVLNVNKPTIAAVDGYA  105 (250)
T ss_dssp             HHHHHHHHHHHHHTCCSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEECCeE
Confidence            123456778899999999999999986

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A

Probab=99.92  E-value=6.7e-25  Score=169.87  Aligned_cols=107  Identities=30%  Similarity=0.423  Sum_probs=87.5

Q ss_pred             cCCCcccEEEEEe-cCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhh
Q psy9280          34 STVKFENILVDKV-GKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQ  111 (143)
Q Consensus        34 ~~~~~~~v~ve~~-~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~  111 (143)
                      ..+.++.+.++++ +   +|++|+||||+++|+||.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++...
T Consensus        22 ~~~~~~~v~~~~~~~---~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~   98 (289)
T 3t89_A           22 CSEGFEDIRYEKSTD---GIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDY   98 (289)
T ss_dssp             CCTTCSSEEEEEETT---SEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC-----
T ss_pred             cCCCCCeEEEEEecC---CEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhcc
Confidence            5577889999998 6   9999999999999999999999999999999999999999999998 599999999988542


Q ss_pred             hhh----hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         112 TYA----ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       112 ~~~----~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...    ......+..++.++..+||||||+|||+|
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a  134 (289)
T 3t89_A           99 GGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYS  134 (289)
T ss_dssp             -----------CTHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             ccchhhhHHHHHHHHHHHHHHHcCCCCEEEEECCEe
Confidence            211    11113456778899999999999999986

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A

Probab=99.92  E-value=7.9e-26  Score=172.87  Aligned_cols=108  Identities=34%  Similarity=0.393  Sum_probs=86.0

Q ss_pred             ccCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh
Q psy9280          33 MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT  112 (143)
Q Consensus        33 ~~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~  112 (143)
                      |+...++.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....
T Consensus         5 ~~~~~m~~v~~~~~~---~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~   81 (262)
T 3r9q_A            5 MSEEMQPAVRVEKAG---PVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDR   81 (262)
T ss_dssp             -----CCSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTT
T ss_pred             CCcccCCEEEEEEEC---CEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccC
Confidence            333446679999987   99999999999999999999999999999999999999999999999999999999986543


Q ss_pred             hhhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 YAANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ............+..+..+||||||+|||+|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~kPvIAav~G~a  112 (262)
T 3r9q_A           82 GNELHPHGPGPMGPSRLRLSKPVIAAISGHA  112 (262)
T ss_dssp             SCCCCTTSSCTTSSTTCCCSSCEEEEECSEE
T ss_pred             hhhHHHhhhhHHHHHHHhCCCCEEEEECCee
Confidence            2211101112233456799999999999986

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}

Probab=99.91  E-value=1.1e-24  Score=168.57  Aligned_cols=105  Identities=21%  Similarity=0.303  Sum_probs=88.3

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      +.+..+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus        30 ~~~~~v~~~~~~---~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~  106 (287)
T 2vx2_A           30 SEPRPTSARQLD---GIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRD  106 (287)
T ss_dssp             --CCSEEEEEET---TEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHH
T ss_pred             CCCcceEEEEEC---CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchh
Confidence            345679999987   99999999999999999999999999999999999999999999999999999999876432111


Q ss_pred             ---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 ---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                         .+...+.+++.++..+||||||+|||+|
T Consensus       107 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  137 (287)
T 2vx2_A          107 YHAEVFQTCSKVMMHIRNHPVPVIAMVNGLA  137 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence               1123456677899999999999999986

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}

Probab=99.91  E-value=4.1e-25  Score=169.93  Aligned_cols=109  Identities=28%  Similarity=0.402  Sum_probs=87.6

Q ss_pred             cccCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEc-----CC-CCccCCCCc
Q psy9280          32 YMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-----NE-KAFAAGADI  105 (143)
Q Consensus        32 ~~~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg-----~g-~~FsaG~Dl  105 (143)
                      |+..+.|+.+.+++++   +|++|+||||+++|+||.+|+++|.+++++++.|+++|+|||||     .| ++||+|+|+
T Consensus         3 w~~~~~~~~v~~~~~~---~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl   79 (275)
T 4eml_A            3 WHIAKHYDDILYYKAG---GIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQ   79 (275)
T ss_dssp             CEEEEECSSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCC
T ss_pred             cccccCCceEEEEEEC---CEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcCh
Confidence            3344567889999987   99999999999999999999999999999999999999999999     88 599999999


Q ss_pred             chhhhhhhhh---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         106 KEMLNQTYAA---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       106 ~~~~~~~~~~---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +++.......   .....+..++.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  120 (275)
T 4eml_A           80 SVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYA  120 (275)
T ss_dssp             C--------------CCCHHHHHHHHHHSSSEEEEEECSEE
T ss_pred             hhhhcccccchhhHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            9986522111   1112356778899999999999999986

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A

Probab=99.91  E-value=1.4e-24  Score=165.51  Aligned_cols=103  Identities=24%  Similarity=0.280  Sum_probs=88.2

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh--
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA--  115 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~--  115 (143)
                      |+.+.+++++   +|++|+||||++.|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.......  
T Consensus        15 ~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~   91 (257)
T 1szo_A           15 YENIRLERDG---GVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWD   91 (257)
T ss_dssp             CTTEEEEEET---TEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHH
T ss_pred             CceEEEEEEC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcCCHHHHH
Confidence            4679999987   99999999999999999999999999999999999999999999999999999999875322111  


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....+.+.+.++..+|||+||+|||+|
T Consensus        92 ~~~~~~~~~~~~l~~~~kPvIAav~G~a  119 (257)
T 1szo_A           92 EIIFEGQRLLNNLLSIEVPVIAAVNGPV  119 (257)
T ss_dssp             HHHHHHHHHHHHHHHCCSCEEEEECSCB
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEEECCch
Confidence            1113345677899999999999999987

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A

Probab=99.91  E-value=1.9e-24  Score=166.01  Aligned_cols=104  Identities=34%  Similarity=0.484  Sum_probs=87.1

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh----
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY----  113 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~----  113 (143)
                      |+++.+++++  ++|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.....    
T Consensus         2 ~~~v~~~~~~--~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~   79 (275)
T 1dci_A            2 YESIQVTSAQ--KHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPG   79 (275)
T ss_dssp             CSSEEEEEEE--TTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCC
T ss_pred             CceEEEEEcC--CCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccc
Confidence            5678898842  2799999999999999999999999999999999999999999999999999999998864310    


Q ss_pred             -h-----hhH---HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 -A-----ANV---KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 -~-----~~~---~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       .     ...   ...+.+++.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  118 (275)
T 1dci_A           80 DDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGC  118 (275)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEE
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence             0     001   12345667889999999999999986

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}

Probab=99.91  E-value=1.5e-24  Score=165.08  Aligned_cols=101  Identities=19%  Similarity=0.272  Sum_probs=86.8

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhH-
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANV-  117 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~-  117 (143)
                      ..+.+++++   +|++|+||||+++|+++.+|+++|.+++++++. +++|+|||||.|++||+|+|++++......... 
T Consensus         7 ~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~   82 (254)
T 3isa_A            7 LPLAIERRP---AAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLL   82 (254)
T ss_dssp             CSEEEEECS---SEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHH
T ss_pred             ceEEEEEEC---CEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchhHHH
Confidence            348899887   999999999999999999999999999999987 589999999999999999999998754433221 


Q ss_pred             -HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         118 -KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       118 -~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       ...+..++.++..+|||+||+|||+|
T Consensus        83 ~~~~~~~~~~~l~~~~kPvIAav~G~a  109 (254)
T 3isa_A           83 RMVRIEMLLQRVAGSPSLTLALAHGRN  109 (254)
T ss_dssp             HHHHHHHHHHHHHTCSSEEEEEECSEE
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEECCeE
Confidence             13456678899999999999999986

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*

Probab=99.91  E-value=1.7e-24  Score=166.53  Aligned_cols=105  Identities=30%  Similarity=0.521  Sum_probs=87.2

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh-
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA-  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~-  114 (143)
                      ..|+.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...... 
T Consensus         6 ~~~~~i~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~   82 (276)
T 2j5i_A            6 GRWKTVKVEIED---GIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG   82 (276)
T ss_dssp             TCCSSEEEEEET---EEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHS
T ss_pred             CCCceEEEEEeC---CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccc
Confidence            457789999887   9999999999999999999999999999999999999999999999999999999987532211 


Q ss_pred             -hh----HHhHHHHH-HHHHhcCCCcEEEEEecCC
Q psy9280         115 -AN----VKTGLLEH-WDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 -~~----~~~~~~~~-~~~l~~~~kP~IAav~G~a  143 (143)
                       ..    +....... +.++..+||||||+|||+|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  117 (276)
T 2j5i_A           83 PEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWC  117 (276)
T ss_dssp             CTTHHHHHHHHHHHHHTTTTTTCSSCEEEEECSCE
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence             11    11112232 5678999999999999986

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}

Probab=99.91  E-value=2e-24  Score=167.10  Aligned_cols=106  Identities=18%  Similarity=0.229  Sum_probs=89.2

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQT  112 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~  112 (143)
                      ....|+.+.+++++   +|++|+||||+ +|+|+.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++....
T Consensus         4 ~~~~~~~i~~~~~~---~va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~   79 (287)
T 3gkb_A            4 RNDAYSTLRVSSEH---GVARIILDNPP-VNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMD   79 (287)
T ss_dssp             ---CCSSEEEEEET---TEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHH
T ss_pred             CCCCCCeEEEEEEC---CEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhcc
Confidence            34568899999987   99999999998 8999999999999999999999999999999987 7999999999986433


Q ss_pred             hhh-------hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 YAA-------NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~~~-------~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ...       .....+..++.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a  117 (287)
T 3gkb_A           80 ALQELAASAPADVNVFQAVGELIRHQPQVTIVKLAGKA  117 (287)
T ss_dssp             HHHHHHHTSCTTCCTTHHHHHHHHHCSSEEEEEECSEE
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            111       0113456778899999999999999986

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}

Probab=99.91  E-value=2.2e-24  Score=164.87  Aligned_cols=104  Identities=24%  Similarity=0.366  Sum_probs=84.7

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh----
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT----  112 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~----  112 (143)
                      .++.+.++..+  ++|++|+||||++ |+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....    
T Consensus         4 ~~~~~~~~~~~--~~v~~itlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~   80 (263)
T 3l3s_A            4 SQDGLLGEVLS--EGVLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPD   80 (263)
T ss_dssp             ----CEEEEES--SSEEEEEECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----C
T ss_pred             CccceEEEEee--CCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccc
Confidence            34567777732  3899999999998 9999999999999999999999999999999999999999999986541    


Q ss_pred             --hh--hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 --YA--ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 --~~--~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                        ..  ..+...+..++.++..+|||+||+|||+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  115 (263)
T 3l3s_A           81 EGRAFVTDLFEACSALMLDLAHCPKPTIALVEGIA  115 (263)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHTCSSCEEEEESSEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence              11  11224566778999999999999999986

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*

Probab=99.91  E-value=1.1e-24  Score=166.19  Aligned_cols=104  Identities=24%  Similarity=0.426  Sum_probs=87.3

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEc-CC-CCccCCCCcchhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NE-KAFAAGADIKEMLNQTY  113 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg-~g-~~FsaG~Dl~~~~~~~~  113 (143)
                      |.|+.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+ +|+||||| .| ++||+|+|++++.....
T Consensus         1 m~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~   76 (261)
T 1ef8_A            1 MSYQYVNVVTIN---KVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGR   76 (261)
T ss_dssp             CCCSSEEEEEET---TEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----
T ss_pred             CCcceEEEEEeC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCc
Confidence            357789999987   99999999999999999999999999999999999 99999999 88 99999999998764321


Q ss_pred             hh-hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AA-NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~-~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .. .....+++++.++..+||||||+|||+|
T Consensus        77 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  107 (261)
T 1ef8_A           77 DPLSYDDPLRQITRMIQKFPKPIISMVEGSV  107 (261)
T ss_dssp             CTTCTTSHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             hhHHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence            11 1113456778899999999999999986

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}

Probab=99.91  E-value=1.8e-25  Score=170.38  Aligned_cols=106  Identities=23%  Similarity=0.410  Sum_probs=90.5

Q ss_pred             CCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh
Q psy9280          35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        35 ~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~  114 (143)
                      .+.++.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|+.||+|+|++++......
T Consensus         8 ~~~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~   84 (258)
T 3lao_A            8 NSGPGRVTREQRG---HLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAA   84 (258)
T ss_dssp             CCSSCCEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBT
T ss_pred             CCCCCeEEEEEEC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccch
Confidence            4567889999987   9999999999999999999999999999999999999999999999999999999998764332


Q ss_pred             hh--HHhHHHHHHHHH-hcCCCcEEEEEecCC
Q psy9280         115 AN--VKTGLLEHWDNI-TKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~~--~~~~~~~~~~~l-~~~~kP~IAav~G~a  143 (143)
                      ..  +...+.+.+.++ ..+|||+||+|||+|
T Consensus        85 ~~~~~~~~~~~~~~~l~~~~~kPvIAav~G~a  116 (258)
T 3lao_A           85 SGFRYPDGGVDPWGVVQPRRSKPLVVAVQGTC  116 (258)
T ss_dssp             TBCCCCTTCCCTTSCSSSCCCSCEEEEECSEE
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence            21  112234456788 999999999999986

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3

Probab=99.91  E-value=3.2e-24  Score=162.96  Aligned_cols=99  Identities=34%  Similarity=0.504  Sum_probs=84.3

Q ss_pred             EEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhh---hhhhhH
Q psy9280          41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ---TYAANV  117 (143)
Q Consensus        41 v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~---~~~~~~  117 (143)
                      +.++ ++   +|++|+||||++.|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...   ......
T Consensus         2 i~~~-~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~   77 (253)
T 1uiy_A            2 VQVE-KG---HVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENY   77 (253)
T ss_dssp             EEEE-CS---SEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHH
T ss_pred             EEEE-eC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHH
Confidence            4566 65   8999999999999999999999999999999999999999999999999999999988653   221111


Q ss_pred             H-hH-HHHHHHHHhcCCCcEEEEEecCC
Q psy9280         118 K-TG-LLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       118 ~-~~-~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      . .. ++.++.++..+||||||+|||+|
T Consensus        78 ~~~~~~~~~~~~i~~~~kPvIAav~G~a  105 (253)
T 1uiy_A           78 RHSLSLMRLFHRVYTYPKPTVAAVNGPA  105 (253)
T ss_dssp             HHHHHHHHHHHHHHHCSSCEEEEECSCE
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            1 12 56777899999999999999986

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}

Probab=99.91  E-value=4.2e-24  Score=163.34  Aligned_cols=102  Identities=21%  Similarity=0.229  Sum_probs=88.1

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEc-CCCCccCCCCcchhhhhhhh-h
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTG-NEKAFAAGADIKEMLNQTYA-A  115 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg-~g~~FsaG~Dl~~~~~~~~~-~  115 (143)
                      ++.+.+++++   +|++|+|||| ++|+++.+|+++|.+++++++.|+++|+||||| .|++||+|+|++++...... .
T Consensus         8 ~~~i~~~~~~---~v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~   83 (265)
T 2ppy_A            8 KQYLTVFKED---GIAEIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFK   83 (265)
T ss_dssp             CSSEEEEEET---TEEEEEECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSCHHHH
T ss_pred             CCeEEEEeeC---CEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhccchhHH
Confidence            5678899887   9999999999 899999999999999999999999999999999 89999999999988652211 1


Q ss_pred             hHHhHH-HHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGL-LEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~-~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .+...+ .+++.++..+||||||+|||+|
T Consensus        84 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a  112 (265)
T 2ppy_A           84 TQFCLFCNETLDKIARSPQVYIACLEGHT  112 (265)
T ss_dssp             HHHHHHHHHHHHHHHHSSSEEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHcCCCCEEEEECCEE
Confidence            122345 6778899999999999999986

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}

Probab=99.91  E-value=7e-25  Score=170.39  Aligned_cols=106  Identities=27%  Similarity=0.318  Sum_probs=78.9

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhh---hh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN---QT  112 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~---~~  112 (143)
                      ..++.+.+++++  ++|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..   ..
T Consensus        26 ~~~~~v~~~~~~--~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~  103 (298)
T 3qre_A           26 DAQDAVLYEATP--GGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYD  103 (298)
T ss_dssp             --CCSEEEEECT--TSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC------------
T ss_pred             CCCCeEEEEEeC--CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhccccc
Confidence            457889999863  2799999999999999999999999999999999999999999999999999999999865   21


Q ss_pred             hh-------hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 YA-------ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~~-------~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..       ..+......++.++..+||||||+|||+|
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a  141 (298)
T 3qre_A          104 KTMAKAKDANLADLVGERPPHFVTMLRKPVIAAINGPC  141 (298)
T ss_dssp             -----------------CCTTGGGGSSSCEEEEECSCE
T ss_pred             cccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCce
Confidence            11       11112233455788999999999999986

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}

Probab=99.91  E-value=2.4e-24  Score=164.93  Aligned_cols=101  Identities=35%  Similarity=0.425  Sum_probs=82.3

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      ..++.+.+++++   +|++|+||||+++|+||.+|+++|.+++++++.| ++|+|||||.|++||+|+|++....   ..
T Consensus        18 ~~~~~i~~~~~~---~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~~---~~   90 (264)
T 3he2_A           18 GPGSMIGITQAE---AVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAF---AA   90 (264)
T ss_dssp             ----CEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCTT---GG
T ss_pred             CCCCeEEEEEEC---CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccchh---hH
Confidence            446789999987   9999999999999999999999999999999988 9999999999999999999984211   11


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .+...+..++.++..+||||||+|||+|
T Consensus        91 ~~~~~~~~~~~~l~~~~kPvIAav~G~a  118 (264)
T 3he2_A           91 DYPDRLIELHKAMDASPMPVVGAINGPA  118 (264)
T ss_dssp             GHHHHHHHHHHHHHHCSSCEEEEECSCE
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCcE
Confidence            2224566778899999999999999986

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0

Probab=99.91  E-value=1.8e-24  Score=165.59  Aligned_cols=102  Identities=28%  Similarity=0.389  Sum_probs=82.2

Q ss_pred             ccEEEE----EecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhh-hhh
Q psy9280          39 ENILVD----KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN-QTY  113 (143)
Q Consensus        39 ~~v~ve----~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~-~~~  113 (143)
                      +.+.++    .++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.. ...
T Consensus         7 ~~v~~~~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~   83 (267)
T 3oc7_A            7 ALVDYAGPAATGG---PVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSP   83 (267)
T ss_dssp             SSEEEECHHHHSS---SEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC----------
T ss_pred             cccCCCCccceeC---CEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCc
Confidence            567788    665   999999999999999999999999999999999999999999999999999999999862 211


Q ss_pred             hh------hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AA------NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~------~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..      .+...+..++.++..+||||||+|||+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  119 (267)
T 3oc7_A           84 SSAYDMAVERAREMAALMRAIVESRLPVIAAIDGHV  119 (267)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCee
Confidence            11      1224566778899999999999999986

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3

Probab=99.91  E-value=2.9e-24  Score=165.52  Aligned_cols=106  Identities=28%  Similarity=0.420  Sum_probs=86.5

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY  113 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~  113 (143)
                      ..+.|+.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++ +|||||.|++||+|+|++++.....
T Consensus        21 ~~~~~~~i~~~~~~---~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~   96 (280)
T 2f6q_A           21 QSMGFETLVVTSED---GITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPP   96 (280)
T ss_dssp             SEEECSSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCT
T ss_pred             ecCCCCeEEEEEEC---CEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCc
Confidence            33457789999887   9999999999999999999999999999999999999 9999999999999999998864321


Q ss_pred             hh--h----HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AA--N----VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~--~----~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..  .    ....+.+++.++..+|||+||+|||+|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  132 (280)
T 2f6q_A           97 GGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPA  132 (280)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHSCCSCEEEEECSCE
T ss_pred             chhhHHHHHHHHHHHHHHHHHHcCCCCEEEEECCee
Confidence            11  1    113455677899999999999999986

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D

Probab=99.91  E-value=2.7e-24  Score=164.52  Aligned_cols=107  Identities=22%  Similarity=0.247  Sum_probs=89.6

Q ss_pred             CCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh
Q psy9280          35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        35 ~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~  114 (143)
                      ...|+.+.+++++  ++|++|+||||++.|++|.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++......
T Consensus        19 ~~~~~~i~~~~~~--~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~   96 (263)
T 2j5g_A           19 FTKYENLHFHRDE--NGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNP   96 (263)
T ss_dssp             GGSCTTEEEEECT--TCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSH
T ss_pred             cCCCCeEEEEEcC--CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCH
Confidence            3456788898863  27999999999999999999999999999999999999999999999999999999998643211


Q ss_pred             h---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .   .....+..++.++..+||||||+|||+|
T Consensus        97 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  128 (263)
T 2j5g_A           97 REWDKTYWEGKKVLQNLLDIEVPVISAVNGAA  128 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence            1   1113345677899999999999999986

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*

Probab=99.91  E-value=3.9e-24  Score=160.92  Aligned_cols=100  Identities=24%  Similarity=0.408  Sum_probs=84.7

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh--h
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA--N  116 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~--~  116 (143)
                      +.+.+++++   +|++|+||||+ .|+++.+|+++|.+++++++.| ++|+|||||.|++||+|+|++++.......  .
T Consensus         5 ~~v~~~~~~---~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~   79 (233)
T 3r6h_A            5 GPVTYTHDD---AIGVIRMDDGK-VNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEAKPAID   79 (233)
T ss_dssp             CCEEEEEET---TEEEEEECCSS-SCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---CHHHHH
T ss_pred             CceEEEEEC---CEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccChHHHHH
Confidence            568899887   99999999985 7999999999999999999987 589999999999999999999987643221  1


Q ss_pred             HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 ~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +.....+++.++.++|||+||+|||+|
T Consensus        80 ~~~~~~~~~~~l~~~~kPvIAav~G~a  106 (233)
T 3r6h_A           80 MLRGGFELSYRLLSYPKPVVIACTGHA  106 (233)
T ss_dssp             HHHHHHHHHHHHHTCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence            224556778999999999999999986

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}

Probab=99.91  E-value=1.8e-24  Score=165.41  Aligned_cols=103  Identities=31%  Similarity=0.408  Sum_probs=80.2

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN  116 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~  116 (143)
                      .++.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++ .........
T Consensus         7 ~~~~v~~~~~~---~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~   82 (265)
T 3rsi_A            7 AARELLVERDG---PVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DGWMVRDGS   82 (265)
T ss_dssp             --CCEEEEEET---TEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-------------
T ss_pred             CCCcEEEEEEC---CEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-cccccchHH
Confidence            46789999987   99999999999999999999999999999999999999999999999999999998 221111111


Q ss_pred             HHhHHHH-HHHHH-h--cCCCcEEEEEecCC
Q psy9280         117 VKTGLLE-HWDNI-T--KAKKPVIAAVNGYA  143 (143)
Q Consensus       117 ~~~~~~~-~~~~l-~--~~~kP~IAav~G~a  143 (143)
                      +...... ++.++ .  .+||||||+|||+|
T Consensus        83 ~~~~~~~~~~~~l~~~~~~~kPvIAav~G~a  113 (265)
T 3rsi_A           83 APPLDPATIGKGLLLSHTLTKPLIAAVNGAC  113 (265)
T ss_dssp             --CCCHHHHHHHTTSSCCCSSCEEEEECSCE
T ss_pred             HHHHhHHHHHHHHHHhcCCCCCEEEEECCee
Confidence            1122344 67888 8  99999999999986

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A

Probab=99.91  E-value=1.3e-24  Score=166.80  Aligned_cols=106  Identities=21%  Similarity=0.302  Sum_probs=90.6

Q ss_pred             CCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh
Q psy9280          35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        35 ~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~  114 (143)
                      .+.|+.+.+++++  ++|++|+||||+ +|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++......
T Consensus         9 ~~~~~~v~~~~~~--~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~   85 (272)
T 3qk8_A            9 YQDFPSLRFEPGE--HGVLNLVLDSPG-LNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGD   85 (272)
T ss_dssp             GGGCTTEEEEECS--TTEEEEEECCHH-HHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHC
T ss_pred             CCCCCeEEEEEeC--CCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccc
Confidence            3457889999864  379999999999 9999999999999999999999999999999999999999999998654321


Q ss_pred             h----hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A----NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~----~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .    .....+..++.++..+||||||+|||+|
T Consensus        86 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  118 (272)
T 3qk8_A           86 YEGRIRIMREARDLVLNLVNLDKPVVSAIRGPA  118 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEE
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            1    1124456778899999999999999986

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0

Probab=99.91  E-value=4.1e-25  Score=169.71  Aligned_cols=104  Identities=33%  Similarity=0.490  Sum_probs=82.2

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh---
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY---  113 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~---  113 (143)
                      .++.+.+++++   +|++|+||||+++|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.....   
T Consensus         9 m~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~   85 (274)
T 3tlf_A            9 SFDTIKYEVDG---HTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIY   85 (274)
T ss_dssp             CCSSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC------------
T ss_pred             cCCceEEEEEC---CEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhcccccc
Confidence            34679999987   999999999999999999999999999999999999999999999999999999999865433   


Q ss_pred             ----hhh--HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 ----AAN--VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ----~~~--~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                          ...  ....++.++.++..+||||||+|||+|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  121 (274)
T 3tlf_A           86 ERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVNGIC  121 (274)
T ss_dssp             --CTTCSGGGGSCCCTTCCCTTSCCSCEEEEECSEE
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence                000  011234456789999999999999986

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}

Probab=99.91  E-value=3.2e-25  Score=169.62  Aligned_cols=104  Identities=27%  Similarity=0.488  Sum_probs=87.8

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN  116 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~  116 (143)
                      .|+.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|+.||+|+|++++........
T Consensus         7 ~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~   83 (265)
T 3swx_A            7 DYETLRIRRDG---YVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGA   83 (265)
T ss_dssp             CCSSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--C
T ss_pred             CCceEEEEEEC---CEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchh
Confidence            36789999987   999999999999999999999999999999999999999999999999999999999875432211


Q ss_pred             --HHhHHHHHHHHH-hcCCCcEEEEEecCC
Q psy9280         117 --VKTGLLEHWDNI-TKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 --~~~~~~~~~~~l-~~~~kP~IAav~G~a  143 (143)
                        ........+.++ ..+|||+||+|||+|
T Consensus        84 ~~~~~~~~~~~~~l~~~~~kPvIAav~G~a  113 (265)
T 3swx_A           84 SLTPEGGINPWQVDGRQLSKPLLVAVHGKV  113 (265)
T ss_dssp             CCCCTTCCCTTCCSSCCCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEcCee
Confidence              112223445677 899999999999986

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3

Probab=99.91  E-value=1e-23  Score=163.39  Aligned_cols=106  Identities=21%  Similarity=0.363  Sum_probs=87.5

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLN-RPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQT  112 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln-~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~  112 (143)
                      ...+|+.+.+++++   +|++|+|| ||+++|+|+.+|+++|.+++++++.|+. |+|||||.|+.||+|+|++++....
T Consensus        18 ~~~~~~~v~~~~~~---~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~   93 (291)
T 2fbm_A           18 GSSTYRDIVVKKED---GFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHL   93 (291)
T ss_dssp             ---CCSSEEEEECS---SEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHH
T ss_pred             CCCCcceEEEEEeC---CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcc
Confidence            44678889999987   99999999 6999999999999999999999998875 9999999999999999999986421


Q ss_pred             hh------hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 YA------ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~~------~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..      ..+...+..++.++..+||||||+|||+|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a  130 (291)
T 2fbm_A           94 RNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPA  130 (291)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCE
T ss_pred             cccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence            11      11113455677889999999999999986

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A

Probab=99.91  E-value=1.1e-24  Score=166.14  Aligned_cols=98  Identities=36%  Similarity=0.486  Sum_probs=82.4

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      ++++.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....   
T Consensus         6 ~~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~---   79 (256)
T 3pe8_A            6 ADSPVLLVDTTD---RVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTT---   79 (256)
T ss_dssp             --CCSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC-------
T ss_pred             CCCCcEEEEEEC---CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhhH---
Confidence            345679999987   99999999999999999999999999999999999999999999999999999999986531   


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                          .+.....++..+||||||+|||+|
T Consensus        80 ----~~~~~~~~l~~~~kPvIAav~G~a  103 (256)
T 3pe8_A           80 ----ELPDISPKWPDMTKPVIGAINGAA  103 (256)
T ss_dssp             ---------CCCCCCCSSCEEEEECSEE
T ss_pred             ----HHHHHHHHHHhCCCCEEEEECCee
Confidence                123334678999999999999986

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}

Probab=99.90  E-value=6.8e-25  Score=168.85  Aligned_cols=105  Identities=30%  Similarity=0.413  Sum_probs=75.0

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      ...+.+.+++++   +|++|+||||+++|+||.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.......
T Consensus        17 ~~~~~v~~~~~~---~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~   93 (278)
T 4f47_A           17 ESGPDALVEQRG---HTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGD   93 (278)
T ss_dssp             --CCSEEEEEET---TEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC---------------
T ss_pred             CCCCceEEEEEC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhh
Confidence            345679999987   99999999999999999999999999999999999999999999999999999999987644322


Q ss_pred             hHHh--HHHHHHHHHh---cCCCcEEEEEecCC
Q psy9280         116 NVKT--GLLEHWDNIT---KAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~--~~~~~~~~l~---~~~kP~IAav~G~a  143 (143)
                      .+..  .....+..+.   .+||||||+|||+|
T Consensus        94 ~~~~~~~~~~~~~~l~~~~~~~kPvIAav~G~a  126 (278)
T 4f47_A           94 SFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPA  126 (278)
T ss_dssp             -------CTTCBTTTTBSCCCSSCEEEEECSEE
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCEEEEECCEE
Confidence            2111  1223345566   99999999999986

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0

Probab=99.90  E-value=2.9e-25  Score=169.94  Aligned_cols=104  Identities=30%  Similarity=0.356  Sum_probs=88.2

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      ..++.+.+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus         4 ~m~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~   80 (265)
T 3qxz_A            4 SMVTELHEEIRD---GVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAP   80 (265)
T ss_dssp             --CCEEEEEEET---TEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCC
T ss_pred             CccceEEEEEEC---CEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchh
Confidence            346789999987   99999999999999999999999999999999999999999999999999999999986543221


Q ss_pred             h--HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 N--VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~--~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .  .... ..++.++..+||||||+|||+|
T Consensus        81 ~~~~~~~-~~~~~~l~~~~kPvIAav~G~a  109 (265)
T 3qxz_A           81 RNPDFSA-SPVQPAAFELRTPVIAAVNGHA  109 (265)
T ss_dssp             CSSCCCS-CCSSSCGGGSSSCEEEEECSEE
T ss_pred             HHHHHHH-HHHHHHHHhCCCCEEEEECCEE
Confidence            1  1122 4566789999999999999986

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}

Probab=99.90  E-value=3e-24  Score=164.91  Aligned_cols=105  Identities=32%  Similarity=0.478  Sum_probs=85.2

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCC-CccCCCCcchhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK-AFAAGADIKEMLNQTYA  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~-~FsaG~Dl~~~~~~~~~  114 (143)
                      ..|+.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|+ +||+|+|++++......
T Consensus        10 ~~~~~i~~~~~~---~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~   86 (273)
T 2uzf_A           10 REYDEIKYEFYE---GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYV   86 (273)
T ss_dssp             BCCSSEEEEEET---TEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------
T ss_pred             CCCceEEEEEEC---CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccc
Confidence            456789999887   89999999999999999999999999999999999999999999998 99999999987542111


Q ss_pred             h--hH-HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A--NV-KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~--~~-~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .  .. ...+..++..+..+||||||+|||+|
T Consensus        87 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  118 (273)
T 2uzf_A           87 GEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYA  118 (273)
T ss_dssp             CCSSSCCCTHHHHHHHHHHSSSCEEEEECEEE
T ss_pred             hhhhHHHhhHHHHHHHHHhCCCCEEEEECCEE
Confidence            0  00 01245677889999999999999986

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3

Probab=99.90  E-value=5.7e-24  Score=162.60  Aligned_cols=101  Identities=22%  Similarity=0.237  Sum_probs=86.5

Q ss_pred             cccEEEEE-ecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhh-h-h-
Q psy9280          38 FENILVDK-VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQ-T-Y-  113 (143)
Q Consensus        38 ~~~v~ve~-~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~-~-~-  113 (143)
                      |+.+.+++ ++   +|++|+||||+ +|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++ +... . . 
T Consensus         9 ~~~v~~~~~~~---~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~   83 (264)
T 1wz8_A            9 YPGLAFAWPRP---GVLEITFRGEK-LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMRASH   83 (264)
T ss_dssp             CTTEEEEEEET---TEEEEEECCSG-GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHHHCH
T ss_pred             CCeEEEEEccC---CEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccccch
Confidence            45788998 76   89999999999 99999999999999999999999999999999999999999999 7543 1 1 


Q ss_pred             h--hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 A--ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~--~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .  ..+...+++++.++..+||||||+|||+|
T Consensus        84 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  115 (264)
T 1wz8_A           84 EALLRVFWEARDLVLGPLNFPRPVVAAVEKVA  115 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCEEEEECCee
Confidence            1  11123456777899999999999999986

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*

Probab=99.90  E-value=1.7e-24  Score=165.25  Aligned_cols=104  Identities=60%  Similarity=0.967  Sum_probs=85.7

Q ss_pred             CcccEEEEE---ecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh
Q psy9280          37 KFENILVDK---VGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY  113 (143)
Q Consensus        37 ~~~~v~ve~---~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~  113 (143)
                      .|+.+.++.   .+   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.....
T Consensus         2 ~~~~~~~~~~v~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~   78 (260)
T 1mj3_A            2 NFQYIITEKKGKNS---SVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTF   78 (260)
T ss_dssp             CCSSEEEEEESGGG---CEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCH
T ss_pred             CcccceeecccCcC---CEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccc
Confidence            466788887   54   899999999999999999999999999999999999999999999999999999998754322


Q ss_pred             hhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .......+...+.++..+||||||+|||+|
T Consensus        79 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  108 (260)
T 1mj3_A           79 QDCYSGKFLSHWDHITRIKKPVIAAVNGYA  108 (260)
T ss_dssp             HHHHHC--CCGGGGGGGCSSCEEEEECSEE
T ss_pred             hHHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence            111112233346788899999999999986

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A

Probab=99.90  E-value=7.8e-24  Score=166.79  Aligned_cols=107  Identities=27%  Similarity=0.319  Sum_probs=87.0

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCC-------CccCCCCcchh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK-------AFAAGADIKEM  108 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~-------~FsaG~Dl~~~  108 (143)
                      .+|+.|.++++. +++|++|+||||+++|+|+.+|+++|.++|++++.|+++|+|||||.|+       +||+|+|++++
T Consensus        52 ~~~~~i~~~~~~-~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~  130 (334)
T 3t8b_A           52 DDLTDITYHRHV-DDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIR  130 (334)
T ss_dssp             TTCSSEEEEEES-SSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTT
T ss_pred             CCCceEEEEEec-cCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHh
Confidence            358899999861 2399999999999999999999999999999999999999999999885       89999999987


Q ss_pred             hhhhh----h------h---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         109 LNQTY----A------A---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       109 ~~~~~----~------~---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....    .      .   .....+..++.+|..+||||||+|||+|
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~A  178 (334)
T 3t8b_A          131 GRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWA  178 (334)
T ss_dssp             C----------------------CCHHHHHHHHHHSSSEEEEEECSEE
T ss_pred             hcccccccccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence            43211    0      0   0012345677889999999999999986

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A

Probab=99.90  E-value=1.1e-23  Score=160.68  Aligned_cols=104  Identities=22%  Similarity=0.360  Sum_probs=87.0

Q ss_pred             CCcccEEEEEecCCCcEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLN-RPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln-~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~  114 (143)
                      ..|+.+.+++++   +|++|+|| ||+++|+||.+|+++|.+++++++.|+ .|+|||||.|++||+|+|++++......
T Consensus         2 ~~~~~i~~~~~~---~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~   77 (261)
T 2gtr_A            2 YRYRDIVVRKQD---GFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTD   77 (261)
T ss_dssp             -CCSSEEEEEET---TEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHH
T ss_pred             CccceEEEEEeC---CEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhcccc
Confidence            357789999987   99999999 699999999999999999999999887 4999999999999999999998642111


Q ss_pred             ------hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ------ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ------~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                            ..+...+.+++.++..+||||||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  112 (261)
T 2gtr_A           78 DRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPA  112 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCE
T ss_pred             chhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeE
Confidence                  11113455677889999999999999986

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}

Probab=99.90  E-value=1.4e-23  Score=167.07  Aligned_cols=103  Identities=28%  Similarity=0.466  Sum_probs=87.1

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhh--h
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTY--A  114 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~--~  114 (143)
                      .+.+.+++++   +|++|+||||+++|+|+.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++.....  .
T Consensus         5 ~~~v~~~~~~---~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~   81 (363)
T 3bpt_A            5 AEEVLLGKKG---CTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQ   81 (363)
T ss_dssp             CCSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSC
T ss_pred             CcceEEEEEC---CEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhccccc
Confidence            4578899887   9999999999999999999999999999999999999999999987 99999999998854321  1


Q ss_pred             ---hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 ---ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ---~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                         ..+......++.++..+||||||+|||+|
T Consensus        82 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  113 (363)
T 3bpt_A           82 KIAPVFFREEYMLNNAVGSCQKPYVALIHGIT  113 (363)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCSSCEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence               11112334567889999999999999986

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}

Probab=99.90  E-value=1.8e-23  Score=161.84  Aligned_cols=105  Identities=18%  Similarity=0.277  Sum_probs=89.9

Q ss_pred             CCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCC-ccCCCCcchhhhhhh
Q psy9280          35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKA-FAAGADIKEMLNQTY  113 (143)
Q Consensus        35 ~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~-FsaG~Dl~~~~~~~~  113 (143)
                      .+.|+.+.+++++   +|++|+||||+ .|+|+.+|+++|.+++++++.|+++|+|||||.|+. ||+|+|++++.....
T Consensus         4 ~~~~~~v~~~~~~---~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~   79 (289)
T 3h0u_A            4 TASYETIKARLDG---TVLSATFNAPP-MNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTA   79 (289)
T ss_dssp             CCCCSSEEEEEET---TEEEEEECCTT-TCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHH
T ss_pred             CCCCCeEEEEEEC---CEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCc
Confidence            4678899999987   99999999998 899999999999999999999999999999998854 567779999876433


Q ss_pred             hh-----hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AA-----NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~-----~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..     .....+..++.++..+||||||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a  114 (289)
T 3h0u_A           80 EAAKAGGPGDASLGMLFRKLSQLPAVTIAKLRGRA  114 (289)
T ss_dssp             HHHTTSSTTCCSHHHHHHHHHTCSSEEEEEECSEE
T ss_pred             chhhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence            22     1124567788999999999999999986

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}

Probab=99.89  E-value=6.6e-24  Score=171.05  Aligned_cols=105  Identities=29%  Similarity=0.368  Sum_probs=88.9

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~  114 (143)
                      ..++.+.+++++   +|++|+||||+++|+|+.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++......
T Consensus        39 v~~~~v~~~~~~---~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~  115 (407)
T 3ju1_A           39 VVFQTLATASGK---LVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVA  115 (407)
T ss_dssp             EEEEEEECTTSC---EEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHH
T ss_pred             cccceEEEEEEC---CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccc
Confidence            446778888766   9999999999999999999999999999999999999999999998 899999999998754221


Q ss_pred             h---------hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 A---------NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~---------~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .         .+......++.+|..+||||||+|||+|
T Consensus       116 ~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAaVnG~a  153 (407)
T 3ju1_A          116 AKGQVTEVAKVFFEEEYRLDYLLHTYGKPVLVWGDGIV  153 (407)
T ss_dssp             HTSSCCHHHHHHHHHHHHHHHHHHTCSSCEEEECCSEE
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCcc
Confidence            1         1113345667899999999999999986

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A

Probab=99.89  E-value=5.5e-24  Score=160.98  Aligned_cols=97  Identities=21%  Similarity=0.298  Sum_probs=82.4

Q ss_pred             EEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhH
Q psy9280          41 ILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTG  120 (143)
Q Consensus        41 v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~  120 (143)
                      ..+++++   +|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++........   .
T Consensus         5 ~~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~---~   78 (243)
T 2q35_A            5 QLTELGN---GVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEV---E   78 (243)
T ss_dssp             EEEEEET---TEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTCC---C
T ss_pred             EEEEeeC---CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchhh---H
Confidence            4456665   899999999999999999999999999999999999999999999999999999998764321111   1


Q ss_pred             HHHHHHHHhcCCCcEEEEEecCC
Q psy9280         121 LLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       121 ~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..+++.++..+|||+||+|||+|
T Consensus        79 ~~~~~~~l~~~~kPvIAav~G~a  101 (243)
T 2q35_A           79 VLDLSGLILDCEIPIIAAMQGHS  101 (243)
T ss_dssp             CCCCHHHHHTCCSCEEEEECSEE
T ss_pred             HHHHHHHHHhCCCCEEEEEcCcc
Confidence            24556789999999999999986

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}

Probab=99.89  E-value=2.3e-23  Score=156.56  Aligned_cols=99  Identities=25%  Similarity=0.301  Sum_probs=84.3

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh-hH
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA-NV  117 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~-~~  117 (143)
                      +.+.+++++   +|++|+||||+ .|+++.+|+++|.+++++++.|  .|+|||||.|++||+|+|++++....... .+
T Consensus         6 ~~v~~~~~~---~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~   79 (232)
T 3ot6_A            6 DLVSYHLDD---GVATLTLNNGK-VNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSSAEAAINL   79 (232)
T ss_dssp             HHEEEEEET---TEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHCHHHHHHH
T ss_pred             cceEEEEEC---CEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhChHHHHHH
Confidence            468899887   99999999985 7999999999999999999976  48999999999999999999987532221 12


Q ss_pred             HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         118 KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       118 ~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ......++.++.++|||+||+|||+|
T Consensus        80 ~~~~~~~~~~l~~~~kPvIAav~G~a  105 (232)
T 3ot6_A           80 VAQGSTLARRMLSHPFPIIVACPGHA  105 (232)
T ss_dssp             HHHHHHHHHHHHTCSSCEEEECCEEE
T ss_pred             HHHHHHHHHHHHcCCCCEEEEECCEe
Confidence            24556778999999999999999986

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A

Probab=99.89  E-value=2.5e-23  Score=158.67  Aligned_cols=100  Identities=22%  Similarity=0.423  Sum_probs=83.3

Q ss_pred             cEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC-CCCccCCCCcchhhhhhhhh--h
Q psy9280          40 NILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-EKAFAAGADIKEMLNQTYAA--N  116 (143)
Q Consensus        40 ~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~-g~~FsaG~Dl~~~~~~~~~~--~  116 (143)
                      .+.+++++   +|++|+||||+ .|+|+.+|+++|.+++++++.|+++|+|||+|. |++||+|+|++++.......  .
T Consensus         6 ~v~~~~~~---~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~   81 (260)
T 1sg4_A            6 LVEPDAGA---GVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAG   81 (260)
T ss_dssp             EEEEETTT---TEEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHH
T ss_pred             EEEEEecC---CEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCHHHHHH
Confidence            34455444   89999999997 799999999999999999999999999999998 79999999999986432211  1


Q ss_pred             HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 ~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      +...++.++.++..+||||||+|||+|
T Consensus        82 ~~~~~~~~~~~l~~~~kPvIAav~G~a  108 (260)
T 1sg4_A           82 YWKAVQELWLRLYQSNLVLVSAINGAC  108 (260)
T ss_dssp             HHHHHHHHHHHHHTCSSEEEEEECEEB
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEECCee
Confidence            224456778899999999999999986

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}

Probab=99.89  E-value=4.6e-24  Score=163.28  Aligned_cols=104  Identities=30%  Similarity=0.478  Sum_probs=77.4

Q ss_pred             cCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhh
Q psy9280          34 STVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTY  113 (143)
Q Consensus        34 ~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~  113 (143)
                      +.+.++.+.+++++   +|++|+||||+++|+|+.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.....
T Consensus        10 ~~~~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~   86 (265)
T 3qxi_A           10 NGDTEPEVLVEQRD---RILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGEN   86 (265)
T ss_dssp             -----CCEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CC
T ss_pred             cCCCCCeEEEEEEC---CEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccch
Confidence            45667899999987   999999999999999999999999999999999999999999999999999999999865432


Q ss_pred             hhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .......+  .+..+.. |||+||+|||+|
T Consensus        87 ~~~~~~~~--~~~~~~~-~kPvIAav~G~a  113 (265)
T 3qxi_A           87 VVVEGRGL--GFTERPP-AKPLIAAVEGYA  113 (265)
T ss_dssp             CEETTTEE--TTTTSCC-SSCEEEEECSEE
T ss_pred             hhhhhhhh--hHHHhhC-CCCEEEEECCce
Confidence            21111111  1334444 999999999986

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A

Probab=99.89  E-value=5.7e-24  Score=162.90  Aligned_cols=103  Identities=34%  Similarity=0.477  Sum_probs=82.9

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhhh
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~~  115 (143)
                      +++.+.+++++   +|++|+||||+++|+||.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++.......
T Consensus         7 ~~~~v~~~~~~---~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~   83 (267)
T 3r9t_A            7 DAPGALAERRG---NVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLY   83 (267)
T ss_dssp             -CCSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCS
T ss_pred             CCCcEEEEEEC---CEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchh
Confidence            35679999987   9999999999999999999999999999999999999999999998 5999999999986543211


Q ss_pred             hHH-hHH-HHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVK-TGL-LEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~-~~~-~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ... ..+ ...+ ....+||||||+|||+|
T Consensus        84 ~~~~~~~~~~~~-~~~~~~kPvIAav~G~a  112 (267)
T 3r9t_A           84 HPDHPEWGFAGY-VRHFIDKPTIAAVNGTA  112 (267)
T ss_dssp             CTTCGGGCGGGT-TTCCCSSCEEEEECSEE
T ss_pred             hHHHHhHHHHHH-HHHhCCCCEEEEECCEE
Confidence            100 011 0112 22489999999999986

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}

Probab=99.89  E-value=7e-24  Score=161.53  Aligned_cols=99  Identities=32%  Similarity=0.579  Sum_probs=83.0

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhH
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANV  117 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~  117 (143)
                      ++.+.+++++   +|++|+||||+++|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus         6 ~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~   82 (256)
T 3trr_A            6 ADEVLIEQRD---RVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSE   82 (256)
T ss_dssp             CCSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEET
T ss_pred             CCceEEEEEC---CEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhh
Confidence            3569999987   9999999999999999999999999999999999999999999999999999999998653221111


Q ss_pred             HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         118 KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       118 ~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       ..+  .+..+ .+|||+||+|||+|
T Consensus        83 -~~~--~~~~~-~~~kPvIAav~G~a  104 (256)
T 3trr_A           83 -RGL--GFTNV-PPRKPIIAAVEGFA  104 (256)
T ss_dssp             -TEE--TTSSS-CCSSCEEEEECSBC
T ss_pred             -hhh--hHHHh-cCCCCEEEEECCee
Confidence             111  12344 89999999999997

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A

Probab=99.89  E-value=2.5e-23  Score=159.72  Aligned_cols=105  Identities=25%  Similarity=0.418  Sum_probs=85.8

Q ss_pred             ccEEEEEe-cCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhhh-
Q psy9280          39 ENILVDKV-GKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYAA-  115 (143)
Q Consensus        39 ~~v~ve~~-~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~~-  115 (143)
                      ..+.+++. ..+++|++|+||||+++|+++.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++....... 
T Consensus         8 ~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~   87 (272)
T 1hzd_A            8 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEV   87 (272)
T ss_dssp             CSEEEEECCGGGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHH
T ss_pred             CcEEEEecccccCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccChHHH
Confidence            45656541 11348999999999999999999999999999999999999999999987 7999999999876432211 


Q ss_pred             -hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 -NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 -~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       .+...+++++.++..+||||||+|||+|
T Consensus        88 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a  116 (272)
T 1hzd_A           88 GPFVSKIRAVINDIANLPVPTIAAIDGLA  116 (272)
T ss_dssp             HHHHHHHHHHHHHHHTCSSCEEEEESEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEeCceE
Confidence             1123456778899999999999999986

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A

Probab=99.89  E-value=2e-22  Score=156.99  Aligned_cols=115  Identities=14%  Similarity=0.180  Sum_probs=81.8

Q ss_pred             hhhhcccCCCcccEEEEEecCCCcEEEEEEcCCCC----CCCCCHHHHHHHHHHHHHHhc-----CCCeeEEEEEcCCCC
Q psy9280          28 YIIKYMSTVKFENILVDKVGKNKNVGLVQLNRPKS----LNALCDALVSEVAAAVQQFDQ-----DSSVAAIVLTGNEKA   98 (143)
Q Consensus        28 ~~r~~~~~~~~~~v~ve~~~~~~~V~~I~ln~p~~----~Nal~~~~~~el~~~l~~~~~-----d~~vr~vVltg~g~~   98 (143)
                      ..|++..+..|+++.+..+- +++|++|+||+|++    +|+|+.+|+.+|.+++++++.     |+++|+|||+|.|++
T Consensus        19 ~~~~~~~~~~y~~i~v~~~~-~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~   97 (305)
T 3m6n_A           19 AVQPFIRTNIGSTLRIIEEP-QRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDV   97 (305)
T ss_dssp             ----------CTTEEEEEET-TTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSS
T ss_pred             cccccCCccCCceEEEEEEE-ECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCC
Confidence            44555555668888886642 45999999999988    559999999999999999987     589999999999999


Q ss_pred             ccCCCCcchhhhhhhhh---h---HHhHHHHHHHHH---hcCCCcEEEEEecCC
Q psy9280          99 FAAGADIKEMLNQTYAA---N---VKTGLLEHWDNI---TKAKKPVIAAVNGYA  143 (143)
Q Consensus        99 FsaG~Dl~~~~~~~~~~---~---~~~~~~~~~~~l---~~~~kP~IAav~G~a  143 (143)
                      ||+|+|++++.......   .   +...+...+..+   ..+||||||+|||+|
T Consensus        98 FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAaV~G~a  151 (305)
T 3m6n_A           98 FNLGGDLALFCQLIREGDRARLLDYAQRCVRGVHAFHVGLGARAHSIALVQGNA  151 (305)
T ss_dssp             SBCCBCHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTGGGTTCEEEEEECSCE
T ss_pred             eecCcCHHHHHhccccccHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCEe
Confidence            99999999986543211   1   112233333333   568999999999986

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*

Probab=99.86  E-value=5e-22  Score=161.09  Aligned_cols=105  Identities=24%  Similarity=0.319  Sum_probs=84.7

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC--------C-CCccCCCCcc
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN--------E-KAFAAGADIK  106 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~--------g-~~FsaG~Dl~  106 (143)
                      ..++.+.+++++   +|++|+||||+++|+||.+|+++|.+++++++.|+++|+|||||.        | ++||+|+||+
T Consensus       164 ~~~~~v~~e~~~---gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~  240 (440)
T 2np9_A          164 VEMEAVHLERRD---GVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLK  240 (440)
T ss_dssp             EECSSEEEEEET---TEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHH
T ss_pred             CCCceEEEEEEC---CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchh
Confidence            445679999887   999999999999999999999999999999999999999999994        6 7999999999


Q ss_pred             hhhhhhh--hhh----HHhHHHHHHHHH------------hcCCCcEEEEEecCC
Q psy9280         107 EMLNQTY--AAN----VKTGLLEHWDNI------------TKAKKPVIAAVNGYA  143 (143)
Q Consensus       107 ~~~~~~~--~~~----~~~~~~~~~~~l------------~~~~kP~IAav~G~a  143 (143)
                      ++.....  ...    ....+..++..+            ..+||||||+|||+|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A  295 (440)
T 2np9_A          241 YLSQGGISLVDFLMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFA  295 (440)
T ss_dssp             HHHTTCCCTTTTHHHHHHTHHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSEE
T ss_pred             hhhccCcchhhhhhHHHHHHHHHHHHHHHhhcccchhhhhhcCCCCEEEEECCcc
Confidence            9864321  110    001233444544            479999999999986

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}

Probab=99.86  E-value=1e-21  Score=161.81  Aligned_cols=105  Identities=23%  Similarity=0.260  Sum_probs=89.5

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHhcC-CCeeEEEEEc-CCCCccCCC
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPK----------SLNALCDALVSEVAAAVQQFDQD-SSVAAIVLTG-NEKAFAAGA  103 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~----------~~Nal~~~~~~el~~~l~~~~~d-~~vr~vVltg-~g~~FsaG~  103 (143)
                      ..|+++.+++++   +|++|+||+|+          ++|+++.+|+.+|.+++++++.| +++|+|||+| .|++||+|+
T Consensus        18 ~~~~~v~ve~~g---gVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGa   94 (556)
T 2w3p_A           18 SQYKHWKLSFNG---PVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGA   94 (556)
T ss_dssp             GGCSSEEEEEET---TEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEE
T ss_pred             CcCceEEEEeeC---CEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCc
Confidence            346789999887   99999999998          89999999999999999999999 9999999999 899999999


Q ss_pred             Ccchhhhhhhhh--hHHhHHHHHHHHH----hcCCCcEEEEEecCC
Q psy9280         104 DIKEMLNQTYAA--NVKTGLLEHWDNI----TKAKKPVIAAVNGYA  143 (143)
Q Consensus       104 Dl~~~~~~~~~~--~~~~~~~~~~~~l----~~~~kP~IAav~G~a  143 (143)
                      |++++.......  .+...+..++.+|    ..+|||+||+|||+|
T Consensus        95 DL~el~~~~~~~~~~~~~~~~~l~~~L~~a~~~~pKPVIAAVnG~A  140 (556)
T 2w3p_A           95 NIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGAC  140 (556)
T ss_dssp             CHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECSEE
T ss_pred             CHHHHhhcccHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCee
Confidence            999986543221  1123445667788    999999999999986

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=99.86  E-value=1.2e-21  Score=167.65  Aligned_cols=88  Identities=34%  Similarity=0.514  Sum_probs=80.4

Q ss_pred             cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhc
Q psy9280          51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITK  130 (143)
Q Consensus        51 ~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~  130 (143)
                      +|++||||||+ .|+|+.+|+++|.+++++++.|+++|+|||||.|+.||+|+||+++......    ..+..++.+|.+
T Consensus        30 ~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~----~~~~~~~~~i~~  104 (742)
T 3zwc_A           30 SLAMIRLCNPP-VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPG----LALGSLVDEIQR  104 (742)
T ss_dssp             TEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSC----SHHHHHHHHHHH
T ss_pred             CEEEEEeCCCc-ccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChh----HHHHHHHHHHHh
Confidence            99999999997 7999999999999999999999999999999999999999999998765433    235677889999


Q ss_pred             CCCcEEEEEecCC
Q psy9280         131 AKKPVIAAVNGYA  143 (143)
Q Consensus       131 ~~kP~IAav~G~a  143 (143)
                      +||||||+|||+|
T Consensus       105 ~~kPvIAai~G~a  117 (742)
T 3zwc_A          105 YQKPVLAAIQGVA  117 (742)
T ss_dssp             CSSCEEEEECSEE
T ss_pred             CCCCEEEEECccc
Confidence            9999999999986

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=99.83  E-value=2.2e-20  Score=159.47  Aligned_cols=101  Identities=23%  Similarity=0.336  Sum_probs=85.5

Q ss_pred             ccEEEE-EecCCCcEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCC-CccCCCCcchhhhhh--h
Q psy9280          39 ENILVD-KVGKNKNVGLVQLNRPK-SLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK-AFAAGADIKEMLNQT--Y  113 (143)
Q Consensus        39 ~~v~ve-~~~~~~~V~~I~ln~p~-~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~-~FsaG~Dl~~~~~~~--~  113 (143)
                      +.+.++ .++   +|++|+||||+ +.|+|+.+|+++|.+++++++.|+++|+||||| |+ +||+|+|++++....  .
T Consensus         6 ~~i~~~~~~~---~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~   81 (715)
T 1wdk_A            6 KAITVTALES---GIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLP   81 (715)
T ss_dssp             SSEEEEECGG---GEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSC
T ss_pred             CeEEEEEeeC---CEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCC
Confidence            457888 555   89999999998 899999999999999999999999999999999 76 999999999986521  1


Q ss_pred             h-h--hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 A-A--NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~-~--~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      . .  .+...++.++.+|.++||||||+|||+|
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  114 (715)
T 1wdk_A           82 DAELIAGNLEANKIFSDFEDLNVPTVAAINGIA  114 (715)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCSSCEEEEECSCE
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence            1 1  1123566778999999999999999986

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=99.83  E-value=2.8e-21  Score=165.26  Aligned_cols=104  Identities=23%  Similarity=0.300  Sum_probs=78.6

Q ss_pred             CCCcccEEEE-EecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCC-CccCCCCcchhhhhh
Q psy9280          35 TVKFENILVD-KVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK-AFAAGADIKEMLNQT  112 (143)
Q Consensus        35 ~~~~~~v~ve-~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~-~FsaG~Dl~~~~~~~  112 (143)
                      ++.+..+.++ .++   +|++|+|||| +.|+|+.+|+++|.+++++++.|+++|+||||| |+ +||+|+||+++....
T Consensus         3 ~~~~~~i~~~~~~~---~va~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~   77 (725)
T 2wtb_A            3 SRTKGKTVMEVGGD---GVAVITLINP-PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQ   77 (725)
T ss_dssp             ----CEEEEEECTT---SEEEEEEECT-TTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC-------
T ss_pred             CCcCCeEEEEEeeC---CEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhccc
Confidence            3566778888 544   8999999999 799999999999999999999999999999999 76 999999999985432


Q ss_pred             hh-----hhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         113 YA-----ANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       113 ~~-----~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..     ......++.++.+|..+||||||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a  113 (725)
T 2wtb_A           78 KGNVKEPKAGYISIDIITDLLEAARKPSVAAIDGLA  113 (725)
T ss_dssp             -----CCSSSHHHHHCCCCCCCTSSSCEEEEECSEE
T ss_pred             chhhhhHHHHHHHHHHHHHHHHhCcCcEEEEECCcc
Confidence            11     11112344556788999999999999986

>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A

Probab=98.84  E-value=1.5e-09  Score=91.06  Aligned_cols=80  Identities=24%  Similarity=0.266  Sum_probs=66.9

Q ss_pred             CcEEEEEEcCCCCCCC--CCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHH
Q psy9280          50 KNVGLVQLNRPKSLNA--LCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDN  127 (143)
Q Consensus        50 ~~V~~I~ln~p~~~Na--l~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~  127 (143)
                      ++|++|++|+|...|+  ++..+.++|.++|++++.|+++|+|||++.+    .|+|+...          ..+.+.+.+
T Consensus       301 ~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~----------~~i~~~i~~  366 (593)
T 3bf0_A          301 DSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS----PGGSVTAS----------EVIRAELAA  366 (593)
T ss_dssp             CEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHH----------HHHHHHHHH
T ss_pred             CCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHH----------HHHHHHHHH
Confidence            4899999999987788  6889999999999999999999999999864    47776542          234556677


Q ss_pred             HhcCCCcEEEEEecCC
Q psy9280         128 ITKAKKPVIAAVNGYA  143 (143)
Q Consensus       128 l~~~~kP~IAav~G~a  143 (143)
                      +..++|||||+|+|+|
T Consensus       367 l~~~~kPVia~v~g~A  382 (593)
T 3bf0_A          367 ARAAGKPVVVSMGGMA  382 (593)
T ss_dssp             HHHTTCCEEEEEEEEE
T ss_pred             HHhCCCCEEEEECCCh
Confidence            8889999999999976

>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}

Probab=98.75  E-value=2.4e-08  Score=74.89  Aligned_cols=81  Identities=20%  Similarity=0.318  Sum_probs=59.2

Q ss_pred             CCcEEEEEEcCCCCCCC-----CC--HHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHH
Q psy9280          49 NKNVGLVQLNRPKSLNA-----LC--DALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGL  121 (143)
Q Consensus        49 ~~~V~~I~ln~p~~~Na-----l~--~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~  121 (143)
                      ++.|++|.++.+=..+.     ++  .-.+++|.++|++++.|+++|+|||++.    |.|+|+...          ..+
T Consensus         2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~----------~~i   67 (240)
T 3rst_A            2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYES----------AEI   67 (240)
T ss_dssp             CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHH----------HHH
T ss_pred             CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHH----------HHH
Confidence            45899999986532111     11  0135899999999999999999999986    578887542          234


Q ss_pred             HHHHHHHhc-CCCcEEEEEecCC
Q psy9280         122 LEHWDNITK-AKKPVIAAVNGYA  143 (143)
Q Consensus       122 ~~~~~~l~~-~~kP~IAav~G~a  143 (143)
                      .+.+.++.. ++||+||+++|.|
T Consensus        68 ~~~l~~~~~~~~kPVia~v~g~a   90 (240)
T 3rst_A           68 HKKLEEIKKETKKPIYVSMGSMA   90 (240)
T ss_dssp             HHHHHHHHHHHCCCEEEEEEEEE
T ss_pred             HHHHHHHHHhCCCeEEEEECCee
Confidence            556667777 8999999999975

>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A

Probab=98.23  E-value=2.8e-06  Score=63.41  Aligned_cols=71  Identities=20%  Similarity=0.267  Sum_probs=57.4

Q ss_pred             CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHh
Q psy9280          50 KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNIT  129 (143)
Q Consensus        50 ~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~  129 (143)
                      +.|++|+++.     +++..+.++|.++|++++++ ++++|+|+.+    |.|+++..             ....+..|.
T Consensus         8 ~~V~vI~i~g-----~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in----spGG~v~~-------------~~~i~~~i~   64 (230)
T 3viv_A            8 NIVYVAQIKG-----QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADA-------------MMNIVQRIQ   64 (230)
T ss_dssp             CEEEEEEEES-----CBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE----BSCEEHHH-------------HHHHHHHHH
T ss_pred             CeEEEEEEeC-----EECHHHHHHHHHHHHHHhcC-CCCEEEEEEe----CCCcCHHH-------------HHHHHHHHH
Confidence            4799999984     69999999999999999864 5899999864    66666532             235667788


Q ss_pred             cCCCcEEEEE---ecCC
Q psy9280         130 KAKKPVIAAV---NGYA  143 (143)
Q Consensus       130 ~~~kP~IAav---~G~a  143 (143)
                      .+++|||++|   +|.|
T Consensus        65 ~~~~PVia~v~p~~G~A   81 (230)
T 3viv_A           65 QSKIPVIIYVYPPGASA   81 (230)
T ss_dssp             TCSSCEEEEECSTTCEE
T ss_pred             hCCCCEEEEEecCCCEE
Confidence            8999999999   9875

>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=97.79  E-value=7.1e-05  Score=57.95  Aligned_cols=80  Identities=15%  Similarity=0.144  Sum_probs=59.5

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHH---
Q psy9280          52 VGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNI---  128 (143)
Q Consensus        52 V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l---  128 (143)
                      |.++-.+..-..|+++..+.+++.++++.+.++ .+.+|+|++.|     |+|+.+....    .  ..+...+.++   
T Consensus       120 V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~~----l--~~~~~i~~al~~~  187 (304)
T 2f9y_B          120 VVAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALMS----L--MQMAKTSAALAKM  187 (304)
T ss_dssp             CBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHHH----H--HHHHHHHHHHHHH
T ss_pred             EEEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHHH----H--HHHHHHHHHHHHH
Confidence            555556555467999999999999999999988 79999999866     8888664321    1  2233444444   


Q ss_pred             hcCCCcEEEEEecCC
Q psy9280         129 TKAKKPVIAAVNGYA  143 (143)
Q Consensus       129 ~~~~kP~IAav~G~a  143 (143)
                      ...++|+|++|+|+|
T Consensus       188 ~~~~vP~IavV~G~~  202 (304)
T 2f9y_B          188 QERGLPYISVLTDPT  202 (304)
T ss_dssp             HHTTCCEEEEEEEEE
T ss_pred             hcCCCCEEEEEECCC
Confidence            556999999999975

>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1

Probab=96.45  E-value=0.0038  Score=45.86  Aligned_cols=61  Identities=25%  Similarity=0.229  Sum_probs=44.4

Q ss_pred             CCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280          66 LCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus        66 l~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ++..+.+++.+.|..++.+++.+.|+|.=    .|.|+++..             ....++.|..+++|+++.++|.|
T Consensus        54 I~~~~a~~i~~~L~~l~~~~~~k~I~l~I----nSPGG~v~a-------------g~~I~~~i~~~~~pV~t~v~G~A  114 (218)
T 1y7o_A           54 VEDNMANSVIAQLLFLDAQDSTKDIYLYV----NTPGGSVSA-------------GLAIVDTMNFIKADVQTIVMGMA  114 (218)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCTTSCEEEEE----EECCBCHHH-------------HHHHHHHHHHSSSCEEEEEEEEE
T ss_pred             ECHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECcCCCHHH-------------HHHHHHHHHhcCCCEEEEEccEe
Confidence            78899999999999998877677777752    333333321             22345667778999999999975

>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}

Probab=95.05  E-value=0.16  Score=39.49  Aligned_cols=72  Identities=14%  Similarity=0.162  Sum_probs=47.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecC
Q psy9280          63 LNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGY  142 (143)
Q Consensus        63 ~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~  142 (143)
                      .++++.+..+.+.+.++.++...- =+|.+.-.++++. |..-.       ...........+.++..+++|+|++|+|.
T Consensus       138 ~G~~~~~~~~Ka~r~~~~A~~~~~-PlI~lvdt~Ga~~-g~~ae-------~~g~~~~~a~~l~al~~~~vPvIavV~G~  208 (327)
T 2f9i_A          138 FGMAHPEGYRKALRLMKQAEKFNR-PIFTFIDTKGAYP-GKAAE-------ERGQSESIATNLIEMASLKVPVIAIVIGE  208 (327)
T ss_dssp             GGCCCHHHHHHHHHHHHHHHHTTC-CEEEEEEESCSCC-CHHHH-------HTTHHHHHHHHHHHHHTCSSCEEEEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhhcCC-CEEEEEeCCCCCc-chhhh-------hhhhHHHHHHHHHHHHhCCCCEEEEEECC
Confidence            478999999999999998876653 3444443222221 21111       11112445666788999999999999997


Q ss_pred             C
Q psy9280         143 A  143 (143)
Q Consensus       143 a  143 (143)
                      |
T Consensus       209 a  209 (327)
T 2f9i_A          209 G  209 (327)
T ss_dssp             E
T ss_pred             c
Confidence            5

>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=94.34  E-value=0.18  Score=39.44  Aligned_cols=72  Identities=11%  Similarity=0.177  Sum_probs=47.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecC
Q psy9280          63 LNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGY  142 (143)
Q Consensus        63 ~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~  142 (143)
                      .++++.+..+.+.++++.++... +=+|.+.-.++++. |....       ...........+.++..+++|+|++|+|.
T Consensus       152 ~G~~~~~~~~Ka~r~~~~A~~~~-lPlI~lvDt~Ga~~-g~~aE-------~~g~~~~~a~~l~al~~~~vPvIavV~G~  222 (339)
T 2f9y_A          152 FGMPAPEGYRKALRLMQMAERFK-MPIITFIDTPGAYP-GVGAE-------ERGQSEAIARNLREMSRLGVPVVCTVIGE  222 (339)
T ss_dssp             GGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-SHHHH-------HTTHHHHHHHHHHHHHTCSSCEEEEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCcc-chHHH-------HHHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            46899999999999999887665 33455543332221 21111       11112345666788999999999999997


Q ss_pred             C
Q psy9280         143 A  143 (143)
Q Consensus       143 a  143 (143)
                      |
T Consensus       223 a  223 (339)
T 2f9y_A          223 G  223 (339)
T ss_dssp             E
T ss_pred             c
Confidence            5

>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A

Probab=93.82  E-value=0.073  Score=38.57  Aligned_cols=59  Identities=15%  Similarity=0.210  Sum_probs=40.4

Q ss_pred             CCHHHHHHHHHHHHHHhcCCCeeEEEEE--cCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280          66 LCDALVSEVAAAVQQFDQDSSVAAIVLT--GNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus        66 l~~~~~~el~~~l~~~~~d~~vr~vVlt--g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ++..+.+.+.+.|..++.++..+.|+|.  +.|+      ++.             .....++.|..+++|+++.+.|.|
T Consensus        36 I~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG------~v~-------------a~~~I~~~i~~~~~pV~~~v~g~A   96 (208)
T 2cby_A           36 VNDEIANRLCAQILLLAAEDASKDISLYINSPGG------SIS-------------AGMAIYDTMVLAPCDIATYAMGMA   96 (208)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CHH-------------HHHHHHHHHHHCSSCEEEEEEEEE
T ss_pred             ECHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCC------CHH-------------HHHHHHHHHHhcCCCEEEEECcEe
Confidence            6778899999999999876656666553  3222      110             123455667778899999998865

>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A

Probab=80.61  E-value=1.8  Score=30.70  Aligned_cols=59  Identities=19%  Similarity=0.180  Sum_probs=40.4

Q ss_pred             CCHHHHHHHHHHHHHHhcCCCeeEEEEE--cCCCCccCCCCcchhhhhhhhhhHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280          66 LCDALVSEVAAAVQQFDQDSSVAAIVLT--GNEKAFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus        66 l~~~~~~el~~~l~~~~~d~~vr~vVlt--g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ++..+.+.+.+.|..++.++..+.|+|.  +.|+      ++             ......++.|..+++|+++.+.|.|
T Consensus        35 I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG------~v-------------~a~~~I~~~i~~~~~pV~~~v~g~A   95 (193)
T 1yg6_A           35 VEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG------VI-------------TAGMSIYDTMQFIKPDVSTICMGQA   95 (193)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CH-------------HHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred             EcHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCC------CH-------------HHHHHHHHHHHhcCCCEEEEEeeeH
Confidence            6788899999999988776656766663  3332      11             1123445667777899999998865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	143
d1mj3a_	260	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat	6e-26
d1dcia_	275	c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2	5e-18
d1q52a_	297	c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacter	3e-17
d1uiya_	253	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {The	2e-15
d1pjha_	266	c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2	2e-12
d1nzya_	269	c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Ps	2e-11
d2f6qa1	245	c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-C	4e-11
d1szoa_	249	c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus	1e-09
d1wdka4	310	c.14.1.3 (A:1-310) Fatty oxidation complex alpha s	2e-09
d1ef8a_	261	c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Esc	3e-09
d2fw2a1	258	c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Hum	8e-09
d1wz8a1	263	c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TT	2e-08
d1hzda_	266	c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [T	4e-08
d2a7ka1	230	c.14.1.3 (A:1-230) Carbapenem biosynthes protein C	1e-06

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 260

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 96.4 bits (239), Expect = 6e-26
 Identities = 65/106 (61%), Positives = 83/106 (78%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           F+ I+ +K GKN +VGL+QLNRPK+LNALC+ L+ E+  A++ F++D +V AIVLTG EK
Sbjct: 3   FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEK 62

Query: 98  AFAAGADIKEMLNQTYAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
           AFAAGADIKEM N+T+        L HWD+IT+ KKPVIAAVNGYA
Sbjct: 63  AFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYA 108

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 275

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 75.9 bits (185), Expect = 5e-18
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 15/119 (12%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E+I V      K+V  VQLNRP+  NA+  A   E+    Q+  +DS   A+V++G  K
Sbjct: 2   YESIQVTSA--QKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGK 59

Query: 98  AFAAGADIKEMLNQT-------------YAANVKTGLLEHWDNITKAKKPVIAAVNGYA 143
            F +G D+ +M +               Y  ++ +   + +  I K  KPVIAA++G  
Sbjct: 60  MFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGC 118

>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} Length = 297

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Naphthoate synthase MenB
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.0 bits (180), Expect = 3e-17
 Identities = 25/126 (19%), Positives = 36/126 (28%), Gaps = 21/126 (16%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
             +I   +   +     V  NRP+  NA     V E+   +        V  ++LTGN  
Sbjct: 17  LTDITYHRHVDD-ATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGP 75

Query: 98  AFAAGADIKEMLNQTYAANVKT--------------------GLLEHWDNITKAKKPVIA 137
           +   G                                      +LE    I    K VI 
Sbjct: 76  SPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVIC 135

Query: 138 AVNGYA 143
            VNG+A
Sbjct: 136 LVNGWA 141

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Length = 253

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

 Score = 68.6 bits (166), Expect = 2e-15
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 51  NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLN 110
           +V +V LN P+  N L   +   +  A+   + D  V A+VLTG  KAF+AGAD+  +  
Sbjct: 8   HVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLER 67

Query: 111 QTYAANVKTG-----LLEHWDNITKAKKPVIAAVNGYA 143
            T     +       L+  +  +    KP +AAVNG A
Sbjct: 68  VTELGAEENYRHSLSLMRLFHRVYTYPKPTVAAVNGPA 105

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 266

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.1 bits (144), Expect = 2e-12
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 37  KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE 96
           + E I     G      ++ L  P +LNAL       +   ++  D++  V   ++  + 
Sbjct: 3   QNEKISYRIEG---PFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSG 59

Query: 97  KAFAAGADIKEMLN 110
           + F++GAD K +  
Sbjct: 60  RFFSSGADFKGIAK 73

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} Length = 269

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

 Score = 57.9 bits (138), Expect = 2e-11
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           +E I          V  + +  P+  NAL    + EV  A+ + ++D SV A+++TG E 
Sbjct: 2   YEAIGHRVED---GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAED 58

Query: 98  AFAAGADIKEM 108
           AF AG  ++E+
Sbjct: 59  AFCAGFYLREI 69

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (135), Expect = 4e-11
 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 10/111 (9%)

Query: 38  FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK 97
           FE ++V        +  +  NRPK  NA+   +  E+  A++   +D S+  ++ TGN  
Sbjct: 2   FETLVVTS---EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVL-TGNGD 57

Query: 98  AFAAGADIKEMLNQTYA------ANVKTGLLEHWDNITKAKKPVIAAVNGY 142
            +++G D+    +           N    L E         KP+IA VNG 
Sbjct: 58  YYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGP 108

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} Length = 249

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

 Score = 52.4 bits (124), Expect = 1e-09
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 3/54 (5%)

Query: 37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAI 90
          K+ENI +++ G    V LV ++              E+A        D     +
Sbjct: 11 KYENIRLERDG---GVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVV 61

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} Length = 310

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

 Score = 52.0 bits (123), Expect = 2e-09
 Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 37  KFENILVDKVGKNKNVGLVQLN-RPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN 95
           + + I V  +     +  ++ + + +S+N      ++E+  AV     D+SV  ++++  
Sbjct: 4   EGKAITVTALESG--IVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSG 61

Query: 96  EKAFAAGADIKEMLNQTYA 114
           +  F  GADI E +     
Sbjct: 62  KDVFIVGADITEFVENFKL 80

>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]} Length = 261

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Methylmalonyl CoA decarboxylase
species: Escherichia coli [TaxId: 562]

 Score = 51.4 bits (121), Expect = 3e-09
 Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 6/60 (10%)

Query: 33 MSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVL 92
          MS   ++ + V  +     V +++ N  + LNAL    + ++  A+   ++      I+ 
Sbjct: 1  MS---YQYVNVVTIN---KVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILR 54

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (118), Expect = 8e-09
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIV 91
          + +I+V K  ++    +V   R    NAL   ++ E+  A+     D S   + 
Sbjct: 1  YRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLF 52

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]} Length = 263

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

 Score = 49.5 bits (116), Expect = 2e-08
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 5/78 (6%)

Query: 33  MSTV--KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAI 90
           ++++  ++  +          V  +   R + LNA+  AL   +A   +  +    V A+
Sbjct: 1   LASLEARYPGLAFAWPRPG--VLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAV 57

Query: 91  VLTGNEKAFAAGADIKEM 108
           +L G    F+AG     +
Sbjct: 58  LLRGEGGVFSAGGSFGLI 75

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} Length = 266

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (113), Expect = 4e-08
 Identities = 11/66 (16%), Positives = 25/66 (37%)

Query: 48  KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKE 107
           +N+ + ++ +NR    N+L   L+  ++ AV     D  V  I++              +
Sbjct: 12  ENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLK 71

Query: 108 MLNQTY 113
              +  
Sbjct: 72  ERAKMS 77

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} Length = 230

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

 Score = 44.1 bits (102), Expect = 1e-06
 Identities = 10/40 (25%), Positives = 18/40 (45%)

Query: 48 KNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSV 87
           +  V ++ L+ P   N     L + V  A+ + + D SV
Sbjct: 6  NSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSV 45

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	143
d1mj3a_	260	Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve	99.95
d1szoa_	249	6-oxo camphor hydrolase {Rhodococcus erythropolis	99.93
d1pjha_	266	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	99.92
d1nzya_	269	4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp.,	99.92
d1ef8a_	261	Methylmalonyl CoA decarboxylase {Escherichia coli	99.92
d1dcia_	275	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	99.91
d1wz8a1	263	Probable enoyl-CoA hydratase TTHA0218 {Thermus the	99.91
d2f6qa1	245	Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (	99.91
d1uiya_	253	Enoyl-CoA hydratase (crotonase) {Thermus thermophi	99.91
d2fw2a1	258	Chromodomain protein CDY2A {Human (Homo sapiens) [	99.9
d2a7ka1	230	Carbapenem biosynthes protein CarB {Pectobacterium	99.9
d1sg4a1	249	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	99.9
d1wdka4	310	Fatty oxidation complex alpha subunit, N-terminal	99.9
d1q52a_	297	Naphthoate synthase MenB {Mycobacterium tuberculos	99.88
d1hzda_	266	AUH protein {Human (Homo sapiens) [TaxId: 9606]}	99.86

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=2.4e-28  Score=183.69  Aligned_cols=108  Identities=60%  Similarity=0.974  Sum_probs=95.2

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA  115 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~  115 (143)
                      .+|+.|.+|++|.+++|++||||||+++|+|+.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++.......
T Consensus         1 ~~~~~i~~e~~g~~~~I~~itlnrP~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~   80 (260)
T d1mj3a_           1 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQD   80 (260)
T ss_dssp             CCCSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHH
T ss_pred             CCCeEEEEEEEcCCCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCcceEEEecccccccccchhhhhhccchhh
Confidence            36899999998766799999999999999999999999999999999999999999999999999999999987655444


Q ss_pred             hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .....+...+..+..+|||+||+|||+|
T Consensus        81 ~~~~~~~~~~~~~~~~~kPvIaav~G~a  108 (260)
T d1mj3a_          81 CYSGKFLSHWDHITRIKKPVIAAVNGYA  108 (260)
T ss_dssp             HHHC--CCGGGGGGGCSSCEEEEECSEE
T ss_pred             hhHHHHHHHHHHhccCCCeEEEEEcCeE
Confidence            4445566667899999999999999986

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

Probab=99.93  E-value=9.3e-26  Score=169.34  Aligned_cols=106  Identities=25%  Similarity=0.268  Sum_probs=93.9

Q ss_pred             CCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhh
Q psy9280          35 TVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYA  114 (143)
Q Consensus        35 ~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~  114 (143)
                      .+.|++|.+++++   +|++|+||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++......
T Consensus         9 ~~~y~~i~~~~~~---~v~~itln~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vvl~g~g~~FsaG~Dl~~~~~~~~~   85 (249)
T d1szoa_           9 SQKYENIRLERDG---GVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPH   85 (249)
T ss_dssp             TTSCTTEEEEEET---TEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHH
T ss_pred             hCCCCeEEEEEEC---CEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcceEeeecccccccccchhhhhhccccc
Confidence            3679999999997   9999999999999999999999999999999999999999999999999999999998654433


Q ss_pred             hh--HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         115 AN--VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       115 ~~--~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ..  ....++.++.++..+|+|+||+|+|+|
T Consensus        86 ~~~~~~~~~~~l~~~i~~~~~pvIa~v~g~~  116 (249)
T d1szoa_          86 DWDEIIFEGQRLLNNLLSIEVPVIAAVNGPV  116 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCSCEEEEECSCB
T ss_pred             chhhhhhhhhhhhhhcccCcccceeeecccc
Confidence            22  224567788999999999999999975

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.2e-25  Score=169.75  Aligned_cols=104  Identities=22%  Similarity=0.237  Sum_probs=89.2

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN  116 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~  116 (143)
                      .++.|.++.+|   +|++|+||||++.|+++.+|+.+|.+++++++.|+++++|||+|.|++||+|+||+++........
T Consensus         3 ~~e~i~~~~~~---~v~~Itlnrp~~~Na~~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~FsaG~Dl~~~~~~~~~~~   79 (266)
T d1pjha_           3 QNEKISYRIEG---PFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDT   79 (266)
T ss_dssp             CBTTEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC------
T ss_pred             CCCeEEEEEEC---CEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccchhHHHHHhcccccc
Confidence            46889999987   999999999999999999999999999999999999999999999999999999999875432110


Q ss_pred             -------------HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 -------------VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 -------------~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                                   +...+..++..+.++|||+||+|||+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a  119 (266)
T d1pjha_          80 NKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPA  119 (266)
T ss_dssp             -CCSSHHHHHHHHTHHHHHHHHHHHHHCCSEEEEEECSCE
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHhcchhhhhhhhccc
Confidence                         113455677899999999999999986

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

Probab=99.92  E-value=1.9e-25  Score=169.02  Aligned_cols=104  Identities=31%  Similarity=0.418  Sum_probs=90.2

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh-
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA-  115 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~-  115 (143)
                      .|+.|.++.++   +|++|+||||+++|+++.+|+++|.+++++++.|+++++|||||.|+.||+|+|++++....... 
T Consensus         1 my~~i~~~i~d---gVa~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~i~~vvltg~g~~F~aG~Dl~~~~~~~~~~~   77 (269)
T d1nzya_           1 MYEAIGHRVED---GVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAG   77 (269)
T ss_dssp             CCSSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHH
T ss_pred             CCCceEEEEEC---CEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCcccccchhhHHHHhhcccccc
Confidence            37889999987   99999999999999999999999999999999999999999999999999999999985432211 


Q ss_pred             ---h---HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 ---N---VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ---~---~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                         .   ....+..++.++..+|||+||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a  111 (269)
T d1nzya_          78 VRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVA  111 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcchhehhhhhhc
Confidence               1   113455677899999999999999986

>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Methylmalonyl CoA decarboxylase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.5e-25  Score=169.01  Aligned_cols=104  Identities=24%  Similarity=0.415  Sum_probs=87.2

Q ss_pred             CCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC--CCCccCCCCcchhhhhhh
Q psy9280          36 VKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN--EKAFAAGADIKEMLNQTY  113 (143)
Q Consensus        36 ~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~--g~~FsaG~Dl~~~~~~~~  113 (143)
                      |+|++|.+++++   +|++|+||||+++|+|+.+|+++|.+++++++. +++++|||+|.  |++||+|+||+++.....
T Consensus         1 M~~~~i~~~~~~---~v~~Itlnrp~~~Nal~~~~~~~l~~al~~~~~-~~~~~vVl~g~~g~~~F~aG~Dl~~~~~~~~   76 (261)
T d1ef8a_           1 MSYQYVNVVTIN---KVAVIEFNYGRKLNALSKVFIDDLMQALSDLNR-PEIRCIILRAPSGSKVFSAGHDIHELPSGGR   76 (261)
T ss_dssp             CCCSSEEEEEET---TEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCS-TTCCEEEEECCTTCSEEECCSCSTTC-----
T ss_pred             CCCCEEEEEEEC---CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEeccccchhhcccccccccccCCc
Confidence            578999999988   999999999999999999999999999999974 57999999985  679999999999876432


Q ss_pred             hhh-HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         114 AAN-VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       114 ~~~-~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      ... +...+..++.++.++|||+||+|||+|
T Consensus        77 ~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a  107 (261)
T d1ef8a_          77 DPLSYDDPLRQITRMIQKFPKPIISMVEGSV  107 (261)
T ss_dssp             CTTCTTSHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             cccccccchhhhHHHHHhCchhhhhcccccc
Confidence            221 225567888999999999999999986

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=1e-24  Score=165.08  Aligned_cols=105  Identities=33%  Similarity=0.502  Sum_probs=89.0

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh-
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA-  115 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~-  115 (143)
                      .|+++.++...  ++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|+.++....... 
T Consensus         1 ~y~~l~~~~~~--~~I~~itlnrP~~~Nals~~m~~el~~~l~~~~~d~~v~~vvltg~~~~F~aG~dl~~~~~~~~~~~   78 (275)
T d1dcia_           1 AYESIQVTSAQ--KHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPP   78 (275)
T ss_dssp             CCSSEEEEEEE--TTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCC
T ss_pred             CCceEEEEEcc--CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccCccHHHhhhcccccc
Confidence            37889887642  389999999999999999999999999999999999999999999999999999999886543211 


Q ss_pred             ------------hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 ------------NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ------------~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                                  .....+...+..+..+|||+||+|||+|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a  118 (275)
T d1dcia_          79 GDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGC  118 (275)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEE
T ss_pred             cccccchhhhhccchhhhHHHHHHHHhcCCCEEEEEeeEe
Confidence                        0113455677899999999999999986

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=7.5e-25  Score=165.40  Aligned_cols=104  Identities=21%  Similarity=0.214  Sum_probs=89.4

Q ss_pred             CcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh-
Q psy9280          37 KFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA-  115 (143)
Q Consensus        37 ~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~-  115 (143)
                      .|+.+.++..+  +||++|+| ||++.|++|.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++....... 
T Consensus         7 ~~~~i~~~~~~--~gV~~itl-rp~~~Nal~~~m~~el~~~~~~~~~d~~vr~vvl~g~g~~FsaG~Dl~~~~~~~~~~~   83 (263)
T d1wz8a1           7 RYPGLAFAWPR--PGVLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHE   83 (263)
T ss_dssp             HCTTEEEEEEE--TTEEEEEE-CCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHHCHH
T ss_pred             CCCeEEEEEcC--CCEEEEEE-CCCCCCCCCHHHHHHHHHHHHHHhhCCCCeEEEEecccccccccchhhhhhhhccccc
Confidence            47889999853  38999999 788899999999999999999999999999999999999999999999986543221 


Q ss_pred             ---hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 ---NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 ---~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                         .+.....+.+..+.++|||+||+|||+|
T Consensus        84 ~~~~~~~~~~~~~~~i~~~~kPvIa~v~G~a  114 (263)
T d1wz8a1          84 ALLRVFWEARDLVLGPLNFPRPVVAAVEKVA  114 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSCEEEEECSEE
T ss_pred             ccccchhhhhHHHHHhhhhhcceeeeccccc
Confidence               1124566778999999999999999986

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.8e-24  Score=161.84  Aligned_cols=102  Identities=29%  Similarity=0.421  Sum_probs=84.5

Q ss_pred             cccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh-
Q psy9280          38 FENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN-  116 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~-  116 (143)
                      |++|.+++++   +|++|+||||+++|++|.+|+.+|.++++.++.|+.+ +||++|.|++||+|+|++++........ 
T Consensus         2 ~~~i~~~~~~---gi~~Itlnrp~~~Nals~~~~~~l~~~l~~~~~d~~v-~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~   77 (245)
T d2f6qa1           2 FETLVVTSED---GITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVE   77 (245)
T ss_dssp             CSSEEEEEET---TEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHH
T ss_pred             cceEEEEEEC---CEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCce-EEeecCCCccccCCccchhhhcccccccc
Confidence            7899999987   9999999999999999999999999999999998876 8889999999999999999875432211 


Q ss_pred             -H----HhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 -V----KTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 -~----~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       .    ...+.+++.++..+|||+||+|||+|
T Consensus        78 ~~~~~~~~~~~~~~~~i~~~~kpvIa~v~G~a  109 (245)
T d2f6qa1          78 EKAKNNAVLLREFVGCFIDFPKPLIAVVNGPA  109 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCSCEEEEECSCE
T ss_pred             cccchhhhHHHHHHhhhhhcCCceEEEECCcc
Confidence             1    13345677899999999999999986

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=2.2e-24  Score=161.20  Aligned_cols=93  Identities=34%  Similarity=0.483  Sum_probs=81.5

Q ss_pred             cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh-----hHHhHHHHHH
Q psy9280          51 NVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA-----NVKTGLLEHW  125 (143)
Q Consensus        51 ~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~-----~~~~~~~~~~  125 (143)
                      +|++||||||+++|++|.+|+.+|.+++++++.|+++++|||||.|+.||+|+|++++.......     .+...+..++
T Consensus         8 ~va~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~v~~vvl~g~g~~f~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~   87 (253)
T d1uiya_           8 HVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLF   87 (253)
T ss_dssp             SEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEecccccccccchhHHhhhccccCcccccchhhhhhhhh
Confidence            79999999999999999999999999999999999999999999999999999999876543221     1124556677


Q ss_pred             HHHhcCCCcEEEEEecCC
Q psy9280         126 DNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       126 ~~l~~~~kP~IAav~G~a  143 (143)
                      ..+.++|||+||+|||+|
T Consensus        88 ~~i~~~~kpvIaav~G~a  105 (253)
T d1uiya_          88 HRVYTYPKPTVAAVNGPA  105 (253)
T ss_dssp             HHHHHCSSCEEEEECSCE
T ss_pred             hHHhcCCCCEEEEeCeEE
Confidence            899999999999999986

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.7e-24  Score=160.11  Aligned_cols=102  Identities=21%  Similarity=0.360  Sum_probs=87.8

Q ss_pred             cccEEEEEecCCCcEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhh-
Q psy9280          38 FENILVDKVGKNKNVGLVQLN-RPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAA-  115 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln-~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~-  115 (143)
                      |++|.+++++   +|++|+|| ||+++|+++.+|+++|.++++.++.|+ .++|||+|.|++||+|+|++++....... 
T Consensus         1 y~~i~v~~~~---gi~~i~l~~rp~~~Nals~~~~~el~~al~~~~~d~-~~~vvl~g~g~~FsaG~Dl~~~~~~~~~~~   76 (258)
T d2fw2a1           1 YRDIVVKKED---GFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADD-SKLVLFSAAGSVFCCGLDFGYFVRHLRNDR   76 (258)
T ss_dssp             CCSEEEEEET---TEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSS-CSEEEEEECSSCSBCCBCHHHHHHHHHHCH
T ss_pred             CceEEEEEEC---CEEEEEECCCCcccCCCCHHHHHHHHHHHHHHHcCC-CEEEEEecCccccccccccchhhhcccccc
Confidence            6889999987   99999997 688999999999999999999999874 69999999999999999999986543221 


Q ss_pred             -----hHHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         116 -----NVKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       116 -----~~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                           .+...+.+++..+..+|||+||+|||+|
T Consensus        77 ~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a  109 (258)
T d2fw2a1          77 NTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPA  109 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCE
T ss_pred             cchhhHHHHHHHHHHHhhhccceeeeeeccccc
Confidence                 1224566778899999999999999986

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

Probab=99.90  E-value=7.9e-24  Score=156.98  Aligned_cols=94  Identities=29%  Similarity=0.526  Sum_probs=82.1

Q ss_pred             CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhhh---hHHhHHHHHH
Q psy9280          50 KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYAA---NVKTGLLEHW  125 (143)
Q Consensus        50 ~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~~---~~~~~~~~~~  125 (143)
                      ++|++||||||++.|+++.+|+.+|.+++++++.|+++|+|||+|.| ++||+|+|++++.......   .+...+.+.+
T Consensus         8 d~I~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~i~~vVl~~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~   87 (230)
T d2a7ka1           8 DEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLY   87 (230)
T ss_dssp             TTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCcccccceeccchhhhhhhcccccccccccccccccchhhhhhhh
Confidence            49999999999999999999999999999999999999999999865 8999999999987643322   2235667788


Q ss_pred             HHHhcCCCcEEEEEecCC
Q psy9280         126 DNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       126 ~~l~~~~kP~IAav~G~a  143 (143)
                      .++..+|||+||+|||+|
T Consensus        88 ~~i~~~~kpvIaav~G~a  105 (230)
T d2a7ka1          88 QAVLNVNKPTIAAVDGYA  105 (230)
T ss_dssp             HHHHTCCSCEEEEECSEE
T ss_pred             hcccchhcceeeeccccc
Confidence            999999999999999986

>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.90  E-value=7.1e-24  Score=158.93  Aligned_cols=103  Identities=22%  Similarity=0.459  Sum_probs=88.2

Q ss_pred             ccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCC-CccCCCCcchhhhhhhhhh-
Q psy9280          39 ENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEK-AFAAGADIKEMLNQTYAAN-  116 (143)
Q Consensus        39 ~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~-~FsaG~Dl~~~~~~~~~~~-  116 (143)
                      +++.++.+. ++||++|+||||+ .|+++.+|+++|.++++.++.|+++++|||+|.|+ +||+|+|++++........ 
T Consensus         2 ~~ilve~~~-~~gIa~itln~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~~Fs~G~Dl~~~~~~~~~~~~   79 (249)
T d1sg4a1           2 QRVLVEPDA-GAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYA   79 (249)
T ss_dssp             CSEEEEEET-TTTEEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHH
T ss_pred             CcEEEEEEC-CCCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHHhCCCccEEEEEeccceeEeccccccccccccccccc
Confidence            567888875 5689999999996 79999999999999999999999999999999774 7999999999865443322 


Q ss_pred             -HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 -VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 -~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                       +...+.+++.++..+|||+||+|||+|
T Consensus        80 ~~~~~~~~~~~~l~~~~kpvIa~v~G~a  107 (249)
T d1sg4a1          80 GYWKAVQELWLRLYQSNLVLVSAINGAC  107 (249)
T ss_dssp             HHHHHHHHHHHHHHTCSSEEEEEECEEB
T ss_pred             ccchhhHHHHHhhhcCccccchhhcccc
Confidence             235666788999999999999999986

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

Probab=99.90  E-value=1.3e-23  Score=162.10  Aligned_cols=104  Identities=21%  Similarity=0.352  Sum_probs=88.7

Q ss_pred             cccEEEEEecCCCcEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCCCcchhhhhhhhhh
Q psy9280          38 FENILVDKVGKNKNVGLVQLN-RPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNEKAFAAGADIKEMLNQTYAAN  116 (143)
Q Consensus        38 ~~~v~ve~~~~~~~V~~I~ln-~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~  116 (143)
                      ++.+.+++.+  +||++|+|| +|++.|+++.+|+++|.+++++++.|+++|+|||+|.|++||+|+|++++........
T Consensus         5 ~~~i~~~~~~--~gva~i~ln~~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~   82 (310)
T d1wdka4           5 GKAITVTALE--SGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPD   82 (310)
T ss_dssp             CSSEEEEECG--GGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTSCH
T ss_pred             CceEEEEEec--CCEEEEEECCCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccchhhhhhhhhcccccc
Confidence            4678888743  489999998 7889999999999999999999999999999999999999999999999865432211


Q ss_pred             -----HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         117 -----VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       117 -----~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                           ....+++++.+|..+||||||+|||+|
T Consensus        83 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  114 (310)
T d1wdka4          83 AELIAGNLEANKIFSDFEDLNVPTVAAINGIA  114 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSSCEEEEECSCE
T ss_pred             hhhhhhhhHHHHHHHHhhcCCccceeeccccc
Confidence                 113466778999999999999999986

>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Naphthoate synthase MenB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=4.7e-23  Score=157.70  Aligned_cols=113  Identities=26%  Similarity=0.255  Sum_probs=84.5

Q ss_pred             hhcccCCCcccEEEEEecCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcC-------CCCccCC
Q psy9280          30 IKYMSTVKFENILVDKVGKNKNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGN-------EKAFAAG  102 (143)
Q Consensus        30 r~~~~~~~~~~v~ve~~~~~~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~-------g~~FsaG  102 (143)
                      |...+.++++.+.++++. +++|++||||||+++|+||.+|+.+|.+++++++.|+++|+|||||.       |+.||+|
T Consensus         9 ~~~~~~~~~~~i~~~~~~-~~gi~~ItlnRP~~~NAl~~~m~~eL~~~l~~~~~d~~vr~vVltg~~~~f~~gG~~f~ag   87 (297)
T d1q52a_           9 RLVDGFDDLTDITYHRHV-DDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSG   87 (297)
T ss_dssp             EECTTCTTCSSEEEEEES-SSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECC
T ss_pred             cccCCcCCCcceEEEEEc-cCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCccEEEEecCCCcccchhhhhhhc
Confidence            444467788889998863 45999999999999999999999999999999999999999999997       4567777


Q ss_pred             CCcchhhhhhhhhh-------------HHhHHHHHHHHHhcCCCcEEEEEecCC
Q psy9280         103 ADIKEMLNQTYAAN-------------VKTGLLEHWDNITKAKKPVIAAVNGYA  143 (143)
Q Consensus       103 ~Dl~~~~~~~~~~~-------------~~~~~~~~~~~l~~~~kP~IAav~G~a  143 (143)
                      .|++..........             ....+..++..|..+||||||+|||+|
T Consensus        88 ~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a  141 (297)
T d1q52a_          88 GDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWA  141 (297)
T ss_dssp             C-----------------------------CHHHHHHHHHHSSSEEEEEECSEE
T ss_pred             chhhhhcccccccccccccchhhhHHHHHHHHHHHHHHHHhcCCeEEEEEccee
Confidence            88876543221100             012355677899999999999999986

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9.3e-23  Score=153.94  Aligned_cols=94  Identities=26%  Similarity=0.417  Sum_probs=83.1

Q ss_pred             CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCCCcchhhhhhhhh--hHHhHHHHHHH
Q psy9280          50 KNVGLVQLNRPKSLNALCDALVSEVAAAVQQFDQDSSVAAIVLTGNE-KAFAAGADIKEMLNQTYAA--NVKTGLLEHWD  126 (143)
Q Consensus        50 ~~V~~I~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~~--~~~~~~~~~~~  126 (143)
                      +||++|+||||+++|++|.+|+++|.++++.++.|+++|+|||+|.| ++||+|.|++++.......  .+...+..++.
T Consensus        14 ~gI~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~f~~g~d~~~~~~~~~~~~~~~~~~~~~~~~   93 (266)
T d1hzda_          14 RGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVIN   93 (266)
T ss_dssp             TTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcceEEEeccccccccccccccccccccchhhhhhhhHHHHHHH
Confidence            47999999999999999999999999999999999999999999976 6899999999987654432  22356777889


Q ss_pred             HHhcCCCcEEEEEecCC
Q psy9280         127 NITKAKKPVIAAVNGYA  143 (143)
Q Consensus       127 ~l~~~~kP~IAav~G~a  143 (143)
                      .+.++|||+||+|||+|
T Consensus        94 ~i~~~~kpvIaav~G~a  110 (266)
T d1hzda_          94 DIANLPVPTIAAIDGLA  110 (266)
T ss_dssp             HHHTCSSCEEEEESEEE
T ss_pred             HHhcCCccccccccccc
Confidence            99999999999999986