Psyllid ID: psy9404

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
MTIKSDNWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDRNGKYQGQTGINLPKI
cccccHHHHHHHHHcccEEEcccccccEEEcccccccccccEEEEEEEEccEEEEEEccccEEEcccccccccEEEEcccEEEEccccEEEEEEEEEEEEcccEEEEEEcccccEEEcEEEEccEEcccccEEEEEEEEEcccccEEEEcccEEEEEEEEEEcccccccccccccccccccccccccc
cccccHHHHHHHHHHcccccccccHHEEcccccEEEEEccccccEEEEEcccEEEEEcccccEEcccccccHHEEEccccEEEEccccEEEEEEEEEEEccccEEEEEEccccHcEEEEEEEcccccccccEEEEEEEEccccccEEEEccccEEEEEEEEccccccccccccccccccccccccccc
mtiksdnwIHNMAKyhgmiepfvphqvreinsRKIVSYGISSygydircanefkiftninstiidpknfdnklfvdfvgdvciippnsfvLARTIEYFRIPRKILTMCigkstyarcgiivnvtpfepewegyvtlefsnttplpakiyseegcaqvlffesdetcktsykdrngkyqgqtginlpki
mtiksdnwIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTsykdrngkyqgqtginlpki
MTIKSDNWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDRNGKYQGQTGINLPKI
******NWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETC**********************
*TIKSDNWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDET********************P**
MTIKSDNWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDRNGKYQGQTGINLPKI
**IKSDNWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDR*******TGINL***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTIKSDNWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDRNGKYQGQTGINLPKI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query188 2.2.26 [Sep-21-2011]
Q0K7L4188 Deoxycytidine triphosphat yes N/A 0.994 0.994 0.828 1e-91
Q474W3188 Deoxycytidine triphosphat yes N/A 0.994 0.994 0.828 2e-91
B2UA12188 Deoxycytidine triphosphat yes N/A 0.994 0.994 0.828 3e-91
Q1LJP8188 Deoxycytidine triphosphat yes N/A 0.994 0.994 0.828 3e-91
B3R622188 Deoxycytidine triphosphat yes N/A 0.994 0.994 0.828 4e-91
Q8XWV4188 Deoxycytidine triphosphat yes N/A 0.994 0.994 0.823 7e-91
Q47IJ7188 Deoxycytidine triphosphat yes N/A 1.0 1.0 0.803 1e-88
A6SX77188 Deoxycytidine triphosphat yes N/A 0.994 0.994 0.818 1e-88
A1W538188 Deoxycytidine triphosphat yes N/A 0.994 0.994 0.786 2e-88
B9MFG4188 Deoxycytidine triphosphat yes N/A 0.994 0.994 0.786 2e-88
>sp|Q0K7L4|DCD_CUPNH Deoxycytidine triphosphate deaminase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dcd PE=3 SV=1 Back     alignment and function desciption
 Score =  335 bits (858), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 155/187 (82%), Positives = 168/187 (89%)

Query: 1   MTIKSDNWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNIN 60
           M+IKSD WI  MA+ HGMIEPF P QVRE + RKIVSYG SSYGYDIRCA+EFKIFTNIN
Sbjct: 1   MSIKSDKWIRRMAEQHGMIEPFAPGQVREQDGRKIVSYGTSSYGYDIRCADEFKIFTNIN 60

Query: 61  STIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGII 120
           STI+DPKNFD K FVDF GDVCIIPPNSF LART+EYFRIPR +LT+C+GKSTYARCGII
Sbjct: 61  STIVDPKNFDEKSFVDFKGDVCIIPPNSFALARTMEYFRIPRSVLTICLGKSTYARCGII 120

Query: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDRNGKYQGQ 180
           VNVTPFEPEWEGYVTLEFSNTTPLPAKIY+ EGCAQVLFFESDE C+TSY+DR GKYQGQ
Sbjct: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEVCETSYRDRGGKYQGQ 180

Query: 181 TGINLPK 187
            G+ LPK
Sbjct: 181 HGVTLPK 187

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: 1EC: 3
>sp|Q474W3|DCD_CUPPJ Deoxycytidine triphosphate deaminase OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) GN=dcd PE=3 SV=1 Back     alignment and function description
>sp|B2UA12|DCD_RALPJ Deoxycytidine triphosphate deaminase OS=Ralstonia pickettii (strain 12J) GN=dcd PE=3 SV=1 Back     alignment and function description
>sp|Q1LJP8|DCD_RALME Deoxycytidine triphosphate deaminase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dcd PE=3 SV=1 Back     alignment and function description
>sp|B3R622|DCD_CUPTR Deoxycytidine triphosphate deaminase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dcd PE=3 SV=1 Back     alignment and function description
>sp|Q8XWV4|DCD_RALSO Deoxycytidine triphosphate deaminase OS=Ralstonia solanacearum (strain GMI1000) GN=dcd PE=3 SV=1 Back     alignment and function description
>sp|Q47IJ7|DCD_DECAR Deoxycytidine triphosphate deaminase OS=Dechloromonas aromatica (strain RCB) GN=dcd PE=3 SV=1 Back     alignment and function description
>sp|A6SX77|DCD_JANMA Deoxycytidine triphosphate deaminase OS=Janthinobacterium sp. (strain Marseille) GN=dcd PE=3 SV=1 Back     alignment and function description
>sp|A1W538|DCD_ACISJ Deoxycytidine triphosphate deaminase OS=Acidovorax sp. (strain JS42) GN=dcd PE=3 SV=1 Back     alignment and function description
>sp|B9MFG4|DCD_ACIET Deoxycytidine triphosphate deaminase OS=Acidovorax ebreus (strain TPSY) GN=dcd PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query188
374369062188 deoxycytidine triphosphate deaminase [Cu 0.994 0.994 0.834 4e-90
113868886188 deoxycytidine triphosphate deaminase [Ra 0.994 0.994 0.828 6e-90
421748517188 deoxycytidine triphosphate deaminase [Cu 0.994 0.994 0.828 7e-90
386332749188 deoxycytidine triphosphate deaminase [Ra 0.994 0.994 0.834 8e-90
73540394188 deoxycytidine triphosphate deaminase [Ra 0.994 0.994 0.828 1e-89
83746729188 Deoxycytidine triphosphate deaminase [Ra 0.994 0.994 0.834 1e-89
187929651188 deoxycytidine triphosphate deaminase [Ra 0.994 0.994 0.828 1e-89
94311687188 deoxycytidine triphosphate deaminase [Cu 0.994 0.994 0.828 2e-89
194290501188 deoxycytidine triphosphate deaminase [Cu 0.994 0.994 0.828 2e-89
340786614188 deoxycytidine triphosphate deaminase [Co 0.994 0.994 0.834 2e-89
>gi|374369062|ref|ZP_09627100.1| deoxycytidine triphosphate deaminase [Cupriavidus basilensis OR16] gi|373099368|gb|EHP40451.1| deoxycytidine triphosphate deaminase [Cupriavidus basilensis OR16] Back     alignment and taxonomy information
 Score =  335 bits (860), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 156/187 (83%), Positives = 168/187 (89%)

Query: 1   MTIKSDNWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNIN 60
           M+IKSD WI  MA+ HGMIEPF P QVRE + RKIVSYG SSYGYDIRCANEFKIFTNIN
Sbjct: 1   MSIKSDKWIRRMAEQHGMIEPFEPGQVREEDGRKIVSYGTSSYGYDIRCANEFKIFTNIN 60

Query: 61  STIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGII 120
           STI+DPKNFD K FVDF GDVCIIPPNSF LART+EYFRIPR +LT+C+GKSTYARCGII
Sbjct: 61  STIVDPKNFDEKSFVDFQGDVCIIPPNSFALARTMEYFRIPRSVLTICLGKSTYARCGII 120

Query: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDRNGKYQGQ 180
           VNVTPFEPEWEGYVTLEFSNTTPLPAKIY+ EGCAQVLFFESDE C+TSY+DR GKYQGQ
Sbjct: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEICETSYRDRGGKYQGQ 180

Query: 181 TGINLPK 187
            G+ LPK
Sbjct: 181 QGVTLPK 187

Source: Cupriavidus basilensis OR16

Species: Cupriavidus basilensis

Genus: Cupriavidus

Family: Burkholderiaceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria
>gi|113868886|ref|YP_727375.1| deoxycytidine triphosphate deaminase [Ralstonia eutropha H16] gi|339326981|ref|YP_004686674.1| deoxycytidine triphosphate deaminase Dcd [Cupriavidus necator N-1] gi|123032745|sp|Q0K7L4.1|DCD_RALEH RecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase gi|113527662|emb|CAJ94007.1| deoxycytidine triphosphate deaminase [Ralstonia eutropha H16] gi|338167138|gb|AEI78193.1| deoxycytidine triphosphate deaminase Dcd [Cupriavidus necator N-1] Back     alignment and taxonomy information
>gi|421748517|ref|ZP_16186105.1| deoxycytidine triphosphate deaminase [Cupriavidus necator HPC(L)] gi|409772757|gb|EKN54692.1| deoxycytidine triphosphate deaminase [Cupriavidus necator HPC(L)] Back     alignment and taxonomy information
>gi|386332749|ref|YP_006028918.1| deoxycytidine triphosphate deaminase [Ralstonia solanacearum Po82] gi|334195197|gb|AEG68382.1| deoxycytidine triphosphate deaminase [Ralstonia solanacearum Po82] Back     alignment and taxonomy information
>gi|73540394|ref|YP_294914.1| deoxycytidine triphosphate deaminase [Ralstonia eutropha JMP134] gi|123625693|sp|Q474W3.1|DCD_RALEJ RecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase gi|72117807|gb|AAZ60070.1| dCTP deaminase [Ralstonia eutropha JMP134] Back     alignment and taxonomy information
>gi|83746729|ref|ZP_00943778.1| Deoxycytidine triphosphate deaminase [Ralstonia solanacearum UW551] gi|207742655|ref|YP_002259047.1| deoxycytidine triphosphate deaminase (dctp deaminase) protein [Ralstonia solanacearum IPO1609] gi|300703382|ref|YP_003744984.1| dTCP deaminase [Ralstonia solanacearum CFBP2957] gi|421891148|ref|ZP_16321969.1| Deoxycytidine triphosphate deaminase (dCTP deaminase) [Ralstonia solanacearum K60-1] gi|421895361|ref|ZP_16325763.1| deoxycytidine triphosphate deaminase (dctp deaminase) protein [Ralstonia solanacearum MolK2] gi|83726682|gb|EAP73811.1| Deoxycytidine triphosphate deaminase [Ralstonia solanacearum UW551] gi|206586526|emb|CAQ17113.1| deoxycytidine triphosphate deaminase (dctp deaminase) protein [Ralstonia solanacearum MolK2] gi|206594049|emb|CAQ60976.1| deoxycytidine triphosphate deaminase (dctp deaminase) protein [Ralstonia solanacearum IPO1609] gi|299071045|emb|CBJ42354.1| Deoxycytidine triphosphate deaminase (dCTP deaminase) [Ralstonia solanacearum CFBP2957] gi|378963482|emb|CCF98717.1| Deoxycytidine triphosphate deaminase (dCTP deaminase) [Ralstonia solanacearum K60-1] Back     alignment and taxonomy information
>gi|187929651|ref|YP_001900138.1| deoxycytidine triphosphate deaminase [Ralstonia pickettii 12J] gi|309781581|ref|ZP_07676316.1| dCTP deaminase [Ralstonia sp. 5_7_47FAA] gi|404396759|ref|ZP_10988553.1| deoxycytidine triphosphate deaminase [Ralstonia sp. 5_2_56FAA] gi|238691805|sp|B2UA12.1|DCD_RALPJ RecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase gi|187726541|gb|ACD27706.1| deoxycytidine triphosphate deaminase [Ralstonia pickettii 12J] gi|308919686|gb|EFP65348.1| dCTP deaminase [Ralstonia sp. 5_7_47FAA] gi|348616840|gb|EGY66335.1| deoxycytidine triphosphate deaminase [Ralstonia sp. 5_2_56FAA] Back     alignment and taxonomy information
>gi|94311687|ref|YP_584897.1| deoxycytidine triphosphate deaminase [Cupriavidus metallidurans CH34] gi|430807595|ref|ZP_19434710.1| deoxycytidine triphosphate deaminase [Cupriavidus sp. HMR-1] gi|166234211|sp|Q1LJP8.1|DCD_RALME RecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase gi|93355539|gb|ABF09628.1| 2'-deoxycytidine 5'-triphosphate deaminase [Cupriavidus metallidurans CH34] gi|429500118|gb|EKZ98502.1| deoxycytidine triphosphate deaminase [Cupriavidus sp. HMR-1] Back     alignment and taxonomy information
>gi|194290501|ref|YP_002006408.1| deoxycytidine triphosphate deaminase [Cupriavidus taiwanensis LMG 19424] gi|238692766|sp|B3R622.1|DCD_CUPTR RecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase gi|193224336|emb|CAQ70347.1| DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Back     alignment and taxonomy information
>gi|340786614|ref|YP_004752079.1| deoxycytidine triphosphate deaminase [Collimonas fungivorans Ter331] gi|340551881|gb|AEK61256.1| Deoxycytidine triphosphate deaminase [Collimonas fungivorans Ter331] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query188
TIGR_CMR|CBU_1688188 CBU_1688 "dUTPase family prote 0.989 0.989 0.731 4e-74
UNIPROTKB|Q9PN07186 dcd "Deoxycytidine triphosphat 0.978 0.989 0.654 1.7e-66
TIGR_CMR|CJE_1484186 CJE_1484 "deoxycytidine tripho 0.978 0.989 0.654 2.2e-66
UNIPROTKB|Q2GCG8185 dcd "Deoxycytidine triphosphat 0.968 0.983 0.602 2.4e-60
TIGR_CMR|NSE_0964185 NSE_0964 "putative deoxycytidi 0.968 0.983 0.602 2.4e-60
UNIPROTKB|Q2GHG6187 dcd "Deoxycytidine triphosphat 0.968 0.973 0.591 5.7e-59
TIGR_CMR|ECH_0296187 ECH_0296 "putative deoxycytidi 0.968 0.973 0.591 5.7e-59
UNIPROTKB|Q2GLJ4185 dcd "Deoxycytidine triphosphat 0.978 0.994 0.574 1.2e-58
TIGR_CMR|APH_0130185 APH_0130 "putative deoxycytidi 0.978 0.994 0.574 1.2e-58
UNIPROTKB|O07247190 dcd "Deoxycytidine triphosphat 0.728 0.721 0.319 7.1e-13
TIGR_CMR|CBU_1688 CBU_1688 "dUTPase family protein" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 136/186 (73%), Positives = 155/186 (83%)

Query:     1 MTIKSDNWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNIN 60
             M IKSD WI  MA+ H +I PF P QVRE  S K++SYG SSYGYD+RCA+EFKIFTNIN
Sbjct:     1 MPIKSDKWIRRMAESHQLIYPFEPKQVRETPSGKVISYGTSSYGYDVRCADEFKIFTNIN 60

Query:    61 STIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGII 120
             ++I+DPKNFD   F+D   +VCIIPPNSFVLART+EYF+IPR ILT+C+GKSTYARCGII
Sbjct:    61 ASIVDPKNFDPNGFIDLKANVCIIPPNSFVLARTVEYFKIPRNILTICLGKSTYARCGII 120

Query:   121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDRNGKYQGQ 180
             VNVTP EPEWEG+VTLEFSNTT LPAKIY+ EG AQ+LF ESDE C  SYKDR GKYQGQ
Sbjct:   121 VNVTPLEPEWEGHVTLEFSNTTNLPAKIYANEGVAQMLFLESDEVCDISYKDRGGKYQGQ 180

Query:   181 TGINLP 186
              G+ LP
Sbjct:   181 KGVTLP 186
GO:0003824 "catalytic activity" evidence=ISS
GO:0008152 "metabolic process" evidence=ISS
UNIPROTKB|Q9PN07 dcd "Deoxycytidine triphosphate deaminase" [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (taxid:192222)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_1484 CJE_1484 "deoxycytidine triphosphate deaminase, putative" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
UNIPROTKB|Q2GCG8 dcd "Deoxycytidine triphosphate deaminase" [Neorickettsia sennetsu str. Miyayama (taxid:222891)] Back     alignment and assigned GO terms
TIGR_CMR|NSE_0964 NSE_0964 "putative deoxycytidine triphosphate deaminase" [Neorickettsia sennetsu str. Miyayama (taxid:222891)] Back     alignment and assigned GO terms
UNIPROTKB|Q2GHG6 dcd "Deoxycytidine triphosphate deaminase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms
TIGR_CMR|ECH_0296 ECH_0296 "putative deoxycytidine triphosphate deaminase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms
UNIPROTKB|Q2GLJ4 dcd "Deoxycytidine triphosphate deaminase" [Anaplasma phagocytophilum HZ (taxid:212042)] Back     alignment and assigned GO terms
TIGR_CMR|APH_0130 APH_0130 "putative deoxycytidine triphosphate deaminase" [Anaplasma phagocytophilum HZ (taxid:212042)] Back     alignment and assigned GO terms
UNIPROTKB|O07247 dcd "Deoxycytidine triphosphate deaminase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q143I2DCD_BURXL3, ., 5, ., 4, ., 1, 30.80310.99460.9894yesN/A
P63904DCD_NEIMB3, ., 5, ., 4, ., 1, 30.77540.99460.9946yesN/A
B2UA12DCD_RALPJ3, ., 5, ., 4, ., 1, 30.82880.99460.9946yesN/A
A1TL98DCD_ACIAC3, ., 5, ., 4, ., 1, 30.78070.99460.9946yesN/A
P63903DCD_NEIMA3, ., 5, ., 4, ., 1, 30.77540.99460.9946yesN/A
Q8XWV4DCD_RALSO3, ., 5, ., 4, ., 1, 30.82350.99460.9946yesN/A
A4JGW2DCD_BURVG3, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
Q5F9H3DCD_NEIG13, ., 5, ., 4, ., 1, 30.77540.99460.9946yesN/A
A9AHK2DCD_BURM13, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
Q21TA1DCD_RHOFD3, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
B5EN98DCD_ACIF53, ., 5, ., 4, ., 1, 30.75400.99460.9946yesN/A
Q47IJ7DCD_DECAR3, ., 5, ., 4, ., 1, 30.80311.01.0yesN/A
B4E8D6DCD_BURCJ3, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
Q0BCT7DCD_BURCM3, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
A1V5V5DCD_BURMS3, ., 5, ., 4, ., 1, 30.80310.99460.9894yesN/A
Q820Q1DCD_NITEU3, ., 5, ., 4, ., 1, 30.75531.01.0yesN/A
B1JWR9DCD_BURCC3, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
Q62LD5DCD_BURMA3, ., 5, ., 4, ., 1, 30.80310.99460.9894yesN/A
Q0K7L4DCD_CUPNH3, ., 5, ., 4, ., 1, 30.82880.99460.9946yesN/A
B1XWK4DCD_LEPCP3, ., 5, ., 4, ., 1, 30.78720.99460.9894yesN/A
A3NSM2DCD_BURP03, ., 5, ., 4, ., 1, 30.80310.99460.9894yesN/A
B3R622DCD_CUPTR3, ., 5, ., 4, ., 1, 30.82880.99460.9946yesN/A
A6SX77DCD_JANMA3, ., 5, ., 4, ., 1, 30.81810.99460.9946yesN/A
C5CV58DCD_VARPS3, ., 5, ., 4, ., 1, 30.79140.99460.9946yesN/A
Q5P236DCD_AROAE3, ., 5, ., 4, ., 1, 30.77651.01.0yesN/A
Q2T083DCD_BURTA3, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
A0K9K6DCD_BURCH3, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
Q63W86DCD_BURPS3, ., 5, ., 4, ., 1, 30.80310.99460.9894yesN/A
B7J7X4DCD_ACIF23, ., 5, ., 4, ., 1, 30.75400.99460.9946yesN/A
B8GMA8DCD_THISH3, ., 5, ., 4, ., 1, 30.75930.99460.9946yesN/A
A1W538DCD_ACISJ3, ., 5, ., 4, ., 1, 30.78600.99460.9946yesN/A
A9M3Z7DCD_NEIM03, ., 5, ., 4, ., 1, 30.78070.99460.9946yesN/A
A2SAG2DCD_BURM93, ., 5, ., 4, ., 1, 30.80310.99460.9894yesN/A
A3MLM0DCD_BURM73, ., 5, ., 4, ., 1, 30.80310.99460.9894yesN/A
Q474W3DCD_CUPPJ3, ., 5, ., 4, ., 1, 30.82880.99460.9946yesN/A
Q12DD9DCD_POLSJ3, ., 5, ., 4, ., 1, 30.79140.99460.9946yesN/A
Q60CV1DCD_METCA3, ., 5, ., 4, ., 1, 30.75400.99460.9946yesN/A
Q39DV8DCD_BURS33, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
A1KT90DCD_NEIMF3, ., 5, ., 4, ., 1, 30.78070.99460.9946yesN/A
A3N6Y6DCD_BURP63, ., 5, ., 4, ., 1, 30.80310.99460.9894yesN/A
B1YUS8DCD_BURA43, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
B4RKC9DCD_NEIG23, ., 5, ., 4, ., 1, 30.77540.99460.9946yesN/A
Q1BUI0DCD_BURCA3, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
B2JEP7DCD_BURP83, ., 5, ., 4, ., 1, 30.79780.99460.9894yesN/A
A4G422DCD_HERAR3, ., 5, ., 4, ., 1, 30.81280.99460.9946yesN/A
A1KAG0DCD_AZOSB3, ., 5, ., 4, ., 1, 30.77651.01.0yesN/A
Q1LJP8DCD_RALME3, ., 5, ., 4, ., 1, 30.82880.99460.9946yesN/A
Q3JBW4DCD_NITOC3, ., 5, ., 4, ., 1, 30.75400.99460.9946yesN/A
B9MFG4DCD_ACIET3, ., 5, ., 4, ., 1, 30.78600.99460.9946yesN/A
B2T181DCD_BURPP3, ., 5, ., 4, ., 1, 30.80850.99460.9894yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.40.998
3rd Layer3.5.4.130.994

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query188
PRK00416177 PRK00416, dcd, deoxycytidine triphosphate deaminas 1e-103
COG0717183 COG0717, Dcd, Deoxycytidine deaminase [Nucleotide 4e-76
TIGR02274179 TIGR02274, dCTP_deam, deoxycytidine triphosphate d 3e-58
cd0755792 cd07557, trimeric_dUTPase, Trimeric dUTP diphospha 8e-22
PHA01707158 PHA01707, dut, 2'-deoxyuridine 5'-triphosphatase 2e-12
>gnl|CDD|234753 PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed Back     alignment and domain information 
 Score =  293 bits (754), Expect = e-103
 Identities = 95/187 (50%), Positives = 124/187 (66%), Gaps = 12/187 (6%)

Query: 3   IKSDNWIHNMAKYHG-MIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINS 61
           I SD  I  M +    MIEPF P QVR            ++ GYD+R  NEF++FTN+NS
Sbjct: 2   ILSDRDIRKMLEEGRLMIEPFDPDQVRP-----------NATGYDLRLGNEFRVFTNVNS 50

Query: 62  TIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIV 121
           T+IDPKNFD   FVD  G+V I+PP  F LART+EYF++P  ++ +  G+S+ AR G+IV
Sbjct: 51  TVIDPKNFDPDSFVDIEGEVFILPPGEFALARTLEYFKLPDDVVGILEGRSSLARLGLIV 110

Query: 122 NVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDRNGKYQGQT 181
           +VT  +P WEG++TLEFSN+ PLP K+Y  EG  Q+LFFE  E  +  Y DR GKYQGQ 
Sbjct: 111 HVTAIDPGWEGHITLEFSNSGPLPVKLYPGEGIGQLLFFELSEPAERPYNDRGGKYQGQR 170

Query: 182 GINLPKI 188
           G+ L +I
Sbjct: 171 GVTLSRI 177

Length = 177
>gnl|CDD|223789 COG0717, Dcd, Deoxycytidine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|233806 TIGR02274, dCTP_deam, deoxycytidine triphosphate deaminase Back     alignment and domain information
>gnl|CDD|143638 cd07557, trimeric_dUTPase, Trimeric dUTP diphosphatases Back     alignment and domain information
>gnl|CDD|107053 PHA01707, dut, 2'-deoxyuridine 5'-triphosphatase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 188
PRK00416177 dcd deoxycytidine triphosphate deaminase; Reviewed 100.0
COG0717183 Dcd Deoxycytidine deaminase [Nucleotide transport 100.0
PHA01707158 dut 2'-deoxyuridine 5'-triphosphatase 100.0
TIGR02274179 dCTP_deam deoxycytidine triphosphate deaminase. Me 100.0
PRK02253167 deoxyuridine 5'-triphosphate nucleotidohydrolase; 100.0
PRK07559365 2'-deoxycytidine 5'-triphosphate deaminase; Provis 100.0
PRK07559 365 2'-deoxycytidine 5'-triphosphate deaminase; Provis 100.0
PF06559 364 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (D 99.97
cd0755792 trimeric_dUTPase Trimeric dUTP diphosphatases. Tri 99.95
PF00692129 dUTPase: dUTPase; InterPro: IPR008180 Synonym(s): 99.93
PHA03094144 dUTPase; Provisional 99.92
TIGR00576141 dut deoxyuridine 5'-triphosphate nucleotidohydrola 99.9
PHA02703165 ORF007 dUTPase; Provisional 99.9
PLN02547157 dUTP pyrophosphatase 99.89
PRK13956147 dut deoxyuridine 5'-triphosphate nucleotidohydrola 99.89
PRK00601150 dut deoxyuridine 5'-triphosphate nucleotidohydrola 99.88
PTZ00143155 deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.86
COG0756148 Dut dUTPase [Nucleotide transport and metabolism] 99.85
PHA03131286 dUTPase; Provisional 99.75
PHA03123402 dUTPase; Provisional 99.72
PF06559364 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (D 99.7
PHA03124418 dUTPase; Provisional 99.69
PHA03126326 dUTPase; Provisional 99.67
PHA03131 286 dUTPase; Provisional 99.63
PHA03130368 dUTPase; Provisional 99.6
PHA03127322 dUTPase; Provisional 99.57
PHA03129436 dUTPase; Provisional 99.54
KOG3370|consensus140 99.46
PHA03129 436 dUTPase; Provisional 99.45
PHA03128376 dUTPase; Provisional 99.04
PHA03127 322 dUTPase; Provisional 98.91
PHA03125376 dUTPase; Provisional 98.83
PHA03128 376 dUTPase; Provisional 98.19
PHA03125 376 dUTPase; Provisional 97.93
PHA03126 326 dUTPase; Provisional 97.62
PF04797379 Herpes_ORF11: Herpesvirus dUTPase protein; InterPr 96.2
PHA03365419 hypothetical protein; Provisional 96.0
PHA03123 402 dUTPase; Provisional 95.35
PHA03130 368 dUTPase; Provisional 95.13
PF05784348 Herpes_UL82_83: Betaherpesvirus UL82/83 protein N 93.55
>PRK00416 dcd deoxycytidine triphosphate deaminase; Reviewed Back     alignment and domain information 
Probab=100.00  E-value=3.4e-51  Score=328.58  Aligned_cols=176  Identities=54%  Similarity=0.954  Sum_probs=160.4

Q ss_pred             ccCCHHHHHHHHHhCC-CcCCCCcCccccccccceeecCcceeeEEeeeCCeEEEEecCCceeecCCCCCCcceEEecCc
Q psy9404           2 TIKSDNWIHNMAKYHG-MIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDNKLFVDFVGD   80 (188)
Q Consensus         2 miLsd~~I~~~~~~~~-~I~Pf~~~~i~pa~~~~~~~~~~~~~s~DlrLg~~~~~~~~~~~~~id~~~~~~~~~~~~~~~   80 (188)
                      |||||++|+++++++. +|+||+++|+||+..           |||||||+.|++|+.....++|+++..+....+++++
T Consensus         1 MiLsd~~I~~~i~~g~i~I~Pf~~~~i~p~~~-----------s~DLrlg~~~~i~~~~~~~~id~~~~~~~~~~~~~~~   69 (177)
T PRK00416          1 MILSDRDIRKMLEEGRLMIEPFDPDQVRPNAT-----------GYDLRLGNEFRVFTNVNSTVIDPKNFDPDSFVDIEGE   69 (177)
T ss_pred             CcCCHHHHHHHHHcCCcEEeCCCHHHcCcCCc-----------eEEEeecCEEEEeecCCccccCcccCCcCcEEEccCC
Confidence            8999999999998887 699999999997311           8999999999999865567889877655555556678


Q ss_pred             eEEECCCCEEEEEeeeEEEcCCCeEEEEEccccccccCeEeecceeCCCCceEEEEEEEeCCCCCEEEeCCCeEEEEEEe
Q psy9404          81 VCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFF  160 (188)
Q Consensus        81 ~~~l~Pg~~~lv~T~E~i~lP~~~~~~i~~RSsl~R~Gl~v~~t~iDpGy~G~i~l~i~N~~~~~i~i~~G~riaQlvF~  160 (188)
                      +++|+||+++|+.|.|++.+|++++|++.+|||++|+|+.+++++|||||+|+|+++++|+++.+++|++|+|||||+|+
T Consensus        70 ~~~l~pg~~~lv~t~e~i~lP~~~~~~i~~RSslar~Gl~v~~~~iD~Gy~G~i~l~l~n~~~~~i~I~~g~rIaQlvf~  149 (177)
T PRK00416         70 VFILPPGEFALARTLEYFKLPDDVVGILEGRSSLARLGLIVHVTAIDPGWEGHITLEFSNSGPLPVKLYPGEGIGQLLFF  149 (177)
T ss_pred             eEEECCCCEEEEEeeeEEECCCCeEEEEEeCchhhcCCEEecCceECcCCcCEEEEEEEeCCCCCEEECCCCEEEEEEEE
Confidence            89999999999999999999999999999999999999999989999999999999999999999999999999999999


Q ss_pred             eccccccccccCCCcccCCCCCCCCCCC
Q psy9404         161 ESDETCKTSYKDRNGKYQGQTGINLPKI  188 (188)
Q Consensus       161 ~~~~~~~~~Y~~~~GkYq~~~~~~~s~~  188 (188)
                      +++++++.+|.++.||||+|+++++||+
T Consensus       150 ~~~~~~~~~Y~~~~gkYq~q~~~~~s~~  177 (177)
T PRK00416        150 ELSEPAERPYNDRGGKYQGQRGVTLSRI  177 (177)
T ss_pred             ECCCccccCccccCcccCCCCCCCccCC
Confidence            9998888999766699999999999985

>COG0717 Dcd Deoxycytidine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>PHA01707 dut 2'-deoxyuridine 5'-triphosphatase Back     alignment and domain information
>TIGR02274 dCTP_deam deoxycytidine triphosphate deaminase Back     alignment and domain information
>PRK02253 deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>PRK07559 2'-deoxycytidine 5'-triphosphate deaminase; Provisional Back     alignment and domain information
>PRK07559 2'-deoxycytidine 5'-triphosphate deaminase; Provisional Back     alignment and domain information
>PF06559 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); InterPro: IPR010550 This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (3 Back     alignment and domain information
>cd07557 trimeric_dUTPase Trimeric dUTP diphosphatases Back     alignment and domain information
>PF00692 dUTPase: dUTPase; InterPro: IPR008180 Synonym(s): dUTP diphosphatase, Deoxyuridine-triphosphatase The essential enzyme dUTP pyrophosphatase (3 Back     alignment and domain information
>PHA03094 dUTPase; Provisional Back     alignment and domain information
>TIGR00576 dut deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) Back     alignment and domain information
>PHA02703 ORF007 dUTPase; Provisional Back     alignment and domain information
>PLN02547 dUTP pyrophosphatase Back     alignment and domain information
>PRK13956 dut deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>PRK00601 dut deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>PTZ00143 deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional Back     alignment and domain information
>COG0756 Dut dUTPase [Nucleotide transport and metabolism] Back     alignment and domain information
>PHA03131 dUTPase; Provisional Back     alignment and domain information
>PHA03123 dUTPase; Provisional Back     alignment and domain information
>PF06559 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); InterPro: IPR010550 This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (3 Back     alignment and domain information
>PHA03124 dUTPase; Provisional Back     alignment and domain information
>PHA03126 dUTPase; Provisional Back     alignment and domain information
>PHA03131 dUTPase; Provisional Back     alignment and domain information
>PHA03130 dUTPase; Provisional Back     alignment and domain information
>PHA03127 dUTPase; Provisional Back     alignment and domain information
>PHA03129 dUTPase; Provisional Back     alignment and domain information
>KOG3370|consensus Back     alignment and domain information
>PHA03129 dUTPase; Provisional Back     alignment and domain information
>PHA03128 dUTPase; Provisional Back     alignment and domain information
>PHA03127 dUTPase; Provisional Back     alignment and domain information
>PHA03125 dUTPase; Provisional Back     alignment and domain information
>PHA03128 dUTPase; Provisional Back     alignment and domain information
>PHA03125 dUTPase; Provisional Back     alignment and domain information
>PHA03126 dUTPase; Provisional Back     alignment and domain information
>PF04797 Herpes_ORF11: Herpesvirus dUTPase protein; InterPro: IPR006882 This family of proteins are found in Herpesvirus Back     alignment and domain information
>PHA03365 hypothetical protein; Provisional Back     alignment and domain information
>PHA03123 dUTPase; Provisional Back     alignment and domain information
>PHA03130 dUTPase; Provisional Back     alignment and domain information
>PF05784 Herpes_UL82_83: Betaherpesvirus UL82/83 protein N terminus; InterPro: IPR008649 This family represents the N-terminal region of the UL82 and UL83 proteins from Betaherpesvirus sp Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query188
4dhk_A191 Crystal Structure Of A Deoxycytidine Triphosphate D 6e-88
3km3_A206 Crystal Structure Of Eoxycytidine Triphosphate Deam 3e-63
2qxx_A190 Bifunctional Dctp Deaminase: Dutpase From Mycobacte 5e-13
4a6a_A190 A115v Variant Of Dctp Deaminase-Dutpase From Mycoba 9e-13
2qlp_A161 Bifunctional Dctp Deaminase:dutpase From Mycobacter 1e-10
1xs1_A193 Dctp Deaminase From Escherichia Coli In Complex Wit 3e-10
2j4h_A193 Crystal Structure Of A H121a Escherichia Coli Dctp 5e-10
2v9x_A193 E138d Variant Of Escherichia Coli Dctp Deaminase In 6e-10
1xs6_A193 Dctp Deaminase From Escherichia Coli. E138a Mutant 1e-09
1xs4_A193 Dctp Deaminase From Escherichia Coli- E138a Mutant 5e-09
>pdb|4DHK|A Chain A, Crystal Structure Of A Deoxycytidine Triphosphate Deaminase (Dctp Deaminase) From Burkholderia Thailandensis Length = 191 Back     alignment and structure 
Iteration: 1

 Score =  319 bits (817), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 150/188 (79%), Positives = 162/188 (86%), Gaps = 1/188 (0%)
Query: 1   MTIKSDNWIHNMAKYHGMIEPFVPHQVREI-NSRKIVSYGISSYGYDIRCANEFKIFTNI 59
           M+IKSD WI  MA+ H MIEPFVP QVR   + R+IVSYG SSYGYDIRCA+EFKIFTNI
Sbjct: 3   MSIKSDKWIRRMAEEHKMIEPFVPDQVRAAEDGRRIVSYGTSSYGYDIRCADEFKIFTNI 62
Query: 60  NSTIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGI 119
           NSTI+DPKNFD   FVDF GDVCIIPPNSF LART+EYFRIPR +LT+C+GKSTYARCGI
Sbjct: 63  NSTIVDPKNFDEGSFVDFKGDVCIIPPNSFALARTVEYFRIPRTVLTVCLGKSTYARCGI 122
Query: 120 IVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDRNGKYQG 179
           IVNVTPFEPEWEGYVTLEFSNTTPLPAKIY+ EG AQVLFFESDE C  SY DR GKYQG
Sbjct: 123 IVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLFFESDEVCDVSYADRGGKYQG 182
Query: 180 QTGINLPK 187
           Q G+ LPK
Sbjct: 183 QRGVTLPK 190
>pdb|3KM3|A Chain A, Crystal Structure Of Eoxycytidine Triphosphate Deaminase From Anaplasma Phagocytophilum At 2.1a Resolution Length = 206 Back     alignment and structure
>pdb|2QXX|A Chain A, Bifunctional Dctp Deaminase: Dutpase From Mycobacterium Tuberculosis In Complex With Dttp Length = 190 Back     alignment and structure
>pdb|4A6A|A Chain A, A115v Variant Of Dctp Deaminase-Dutpase From Mycobacterium Tuberculosis In Complex With Dttp Length = 190 Back     alignment and structure
>pdb|2QLP|A Chain A, Bifunctional Dctp Deaminase:dutpase From Mycobacterium Tuberculosis, Apo Form Length = 161 Back     alignment and structure
>pdb|1XS1|A Chain A, Dctp Deaminase From Escherichia Coli In Complex With Dutp Length = 193 Back     alignment and structure
>pdb|2J4H|A Chain A, Crystal Structure Of A H121a Escherichia Coli Dctp Deaminase Mutant Enzyme Length = 193 Back     alignment and structure
>pdb|2V9X|A Chain A, E138d Variant Of Escherichia Coli Dctp Deaminase In Complex With Dutp Length = 193 Back     alignment and structure
>pdb|1XS6|A Chain A, Dctp Deaminase From Escherichia Coli. E138a Mutant Enzyme In Complex With Dutp Length = 193 Back     alignment and structure
>pdb|1XS4|A Chain A, Dctp Deaminase From Escherichia Coli- E138a Mutant Enzyme In Complex With Dctp Length = 193 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query188
3km3_A206 DCTP deaminase, deoxycytidine triphosphate deamina 5e-69
4dhk_A191 DCTP deaminase, deoxycytidine triphosphate deamina 3e-68
2yzj_A169 167AA long hypothetical dutpase; all beta proteins 2e-66
2qxx_A190 DCTP deaminase, deoxycytidine triphosphate deamina 4e-66
1xs1_A193 DCTP deaminase, deoxycytidine triphosphate deamina 1e-62
1pkh_A204 Bifunctional deaminase/diphosphatase; DCTP deamina 1e-51
2r9q_A 370 AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deami 1e-19
2r9q_A370 AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deami 2e-08
2bsy_A278 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>3km3_A DCTP deaminase, deoxycytidine triphosphate deaminase; ssgcid, NIH, niaid, SBRI, UW, decode, deoxycytidine triphosp deaminase; 2.10A {Anaplasma phagocytophilum} Length = 206 Back     alignment and structure
 Score =  208 bits (529), Expect = 5e-69
 Identities = 108/188 (57%), Positives = 133/188 (70%), Gaps = 4/188 (2%)

Query: 1   MTIKSDNWIHNMAKYHGMIEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNIN 60
           M++  D+WI   A   GMI PFV H+        ++SYG+SSYGYD R  N+FKIF N +
Sbjct: 22  MSVMPDHWIKERALKDGMISPFVDHKEGT----GVLSYGLSSYGYDARLDNKFKIFANTH 77

Query: 61  STIIDPKNFDNKLFVDFVGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGII 120
           S ++DPKNF    FVD  GD CIIPPNSF+LA+T+EYF IPR ++ +C+GKSTYARCGI+
Sbjct: 78  SVVVDPKNFSQDSFVDREGDFCIIPPNSFMLAKTVEYFNIPRDVMVVCVGKSTYARCGIV 137

Query: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKTSYKDRNGKYQGQ 180
           VNVTP EP W GYVTLEFSNT+PLP K+Y+ EG  Q LFF   E C  SY +  GKY GQ
Sbjct: 138 VNVTPLEPGWSGYVTLEFSNTSPLPVKVYAFEGACQFLFFSGKERCSKSYDEAGGKYMGQ 197

Query: 181 TGINLPKI 188
           + + LP I
Sbjct: 198 SDVTLPII 205
>4dhk_A DCTP deaminase, deoxycytidine triphosphate deaminase; hydrolase; 2.05A {Burkholderia thailandensis} Length = 191 Back     alignment and structure
>2yzj_A 167AA long hypothetical dutpase; all beta proteins, hypothetical protein, NPPSFA; HET: DUD; 1.66A {Sulfolobus tokodaii} PDB: 2zdc_A Length = 169 Back     alignment and structure
>2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis} PDB: 2qlp_A* Length = 190 Back     alignment and structure
>1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} SCOP: b.85.4.1 PDB: 2v9x_A* 1xs6_A* 1xs4_A* 2j4q_A* 2j4h_A* Length = 193 Back     alignment and structure
>1pkh_A Bifunctional deaminase/diphosphatase; DCTP deaminase, dutpase, DCD-DUT, MJ0430, DCTP, DUTP, hydrolase; 1.42A {Methanocaldococcus jannaschii} SCOP: b.85.4.1 PDB: 1ogh_A 1pkj_A* 1pkk_A* 2hxb_A 2hxe_A 3gf0_A 2hxd_A* Length = 204 Back     alignment and structure
>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genom MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} Length = 370 Back     alignment and structure
>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genom MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} Length = 370 Back     alignment and structure
>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A* Length = 278 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query188
4dhk_A191 DCTP deaminase, deoxycytidine triphosphate deamina 100.0
3km3_A206 DCTP deaminase, deoxycytidine triphosphate deamina 100.0
1xs1_A193 DCTP deaminase, deoxycytidine triphosphate deamina 100.0
2qxx_A190 DCTP deaminase, deoxycytidine triphosphate deamina 100.0
1pkh_A204 Bifunctional deaminase/diphosphatase; DCTP deamina 100.0
2yzj_A169 167AA long hypothetical dutpase; all beta proteins 100.0
2r9q_A370 AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deami 100.0
2r9q_A 370 AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deami 100.0
1f7d_A136 POL polyprotein; eight stranded beta-barrel, viral 99.94
1dun_A134 Deoxyuridine 5'-triphosphate nucleoditohydrolase; 99.93
2ol1_A147 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.93
3lqw_A163 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.93
3c2t_A141 Deoxyuridine triphosphatase; dutpase chlorella vir 99.93
1euw_A152 Dutpase, deoxyuridine 5'-triphosphate nucleotidohy 99.93
3p48_A147 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.92
3so2_A146 Putative uncharacterized protein; deoxyuridine tri 99.92
3ca9_A165 Deoxyuridine triphosphatase; dutpase chlorella vir 99.92
2p9o_A169 DUTP pyrophosphatase-like protein; dutpase, magnes 99.92
3f4f_A167 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.92
3ara_A164 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.92
3ecy_A160 CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, 99.92
3h6x_A148 Dutpase; jelly-roll beta-barrel, hydrolase; 1.70A 99.91
3hza_A174 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.91
3mdx_A178 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.91
3tqz_A155 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.9
2xx6_A142 SPBC2 prophage-derived deoxyuridine 5'-triphospha 99.9
3tq5_A152 Deoxyuridine 5'-triphosphate nucleotido hydrolase; 99.87
3t64_A181 Deoxyuridine 5'-triphosphate nucleotidohydrolase,; 99.83
2bsy_A278 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.83
2bsy_A 278 Deoxyuridine 5'-triphosphate nucleotidohydrolase; 99.62
>4dhk_A DCTP deaminase, deoxycytidine triphosphate deaminase; hydrolase; 2.05A {Burkholderia thailandensis} Back     alignment and structure
Probab=100.00  E-value=2.7e-61  Score=389.92  Aligned_cols=188  Identities=80%  Similarity=1.359  Sum_probs=161.7

Q ss_pred             CccCCHHHHHHHHHhCCCcCCCCcCccccc-cccceeecCcceeeEEeeeCCeEEEEecCCceeecCCCCCCcceEEecC
Q psy9404           1 MTIKSDNWIHNMAKYHGMIEPFVPHQVREI-NSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDNKLFVDFVG   79 (188)
Q Consensus         1 MmiLsd~~I~~~~~~~~~I~Pf~~~~i~pa-~~~~~~~~~~~~~s~DlrLg~~~~~~~~~~~~~id~~~~~~~~~~~~~~   79 (188)
                      ||||||++|+++++++.+|+||+++|+||+ ++++++|||+||+|||||||++|++|.+.+..++|+++.++..++++++
T Consensus         3 M~ILsd~~I~~~~~~~~~I~Pf~~~~v~p~~~~~~~~s~g~ss~s~DLRLg~~f~v~~~~~~~~iD~~~~~~~~~~~~~~   82 (191)
T 4dhk_A            3 MSIKSDKWIRRMAEEHKMIEPFVPDQVRAAEDGRRIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEGSFVDFKG   82 (191)
T ss_dssp             --CCCHHHHHHHHHHHCCEESCCSSEEEECTTSCEEEEEEEETTEEEEEBCSEEEEECCTTCCCCCTTSCCGGGEEEEES
T ss_pred             ceecCHHHHHHHHHhCCCccCCCHHHcCccccccceeeccCCCceEEEEeCCEEEEeeCCCCcEecCCCCCcceEEEecC
Confidence            999999999999988889999999999985 4689999999999999999999999998766799999877778888888


Q ss_pred             ceEEECCCCEEEEEeeeEEEcCCCeEEEEEccccccccCeEeecceeCCCCceEEEEEEEeCCCCCEEEeCCCeEEEEEE
Q psy9404          80 DVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLF  159 (188)
Q Consensus        80 ~~~~l~Pg~~~lv~T~E~i~lP~~~~~~i~~RSsl~R~Gl~v~~t~iDpGy~G~i~l~i~N~~~~~i~i~~G~riaQlvF  159 (188)
                      +.++|+||+++|+.|.|++.+|++++|++.+|||++|+|+.+++|+|||||+|+|+++++|+++.|++|++|+|||||+|
T Consensus        83 e~~vL~Pg~~~Lv~T~e~i~iP~~~~a~i~~RSslar~Gl~v~~~~iD~gy~G~i~l~l~N~~~~p~~I~~G~RIaQlvf  162 (191)
T 4dhk_A           83 DVCIIPPNSFALARTVEYFRIPRTVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLF  162 (191)
T ss_dssp             SEEEECTTEEEEEEEEEEEECCTTEEEEEEECHHHHTTTEEEECCCCCTTCEEEEEEEEEECSSSCEEEETTSEEEEEEE
T ss_pred             CcEEECCCCEEEEEEEEEEECCCCeEEEEEeCchhhhCCEEeccceECcCCCCEEEEEEEeCCCCCEEEcCCCEEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccccccccccCCCcccCCCCCCCCCCC
Q psy9404         160 FESDETCKTSYKDRNGKYQGQTGINLPKI  188 (188)
Q Consensus       160 ~~~~~~~~~~Y~~~~GkYq~~~~~~~s~~  188 (188)
                      +++.++++++|++++||||+|+|+|+||+
T Consensus       163 ~~~~~~~~~~Y~~~~gkYq~q~g~t~~k~  191 (191)
T 4dhk_A          163 FESDEVCDVSYADRGGKYQGQRGVTLPKT  191 (191)
T ss_dssp             EECSSCCSSCTTC----------------
T ss_pred             EECcCCcccccccCCCCcCCCCCCccCCC
Confidence            99999999999888899999999999985
>3km3_A DCTP deaminase, deoxycytidine triphosphate deaminase; ssgcid, NIH, niaid, SBRI, UW, decode, deoxycytidine triphosp deaminase; 2.10A {Anaplasma phagocytophilum} Back     alignment and structure
>1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} SCOP: b.85.4.1 PDB: 2v9x_A* 1xs6_A* 1xs4_A* 2j4q_A* 2j4h_A* Back     alignment and structure
>2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis} PDB: 2qlp_A* Back     alignment and structure
>1pkh_A Bifunctional deaminase/diphosphatase; DCTP deaminase, dutpase, DCD-DUT, MJ0430, DCTP, DUTP, hydrolase; 1.42A {Methanocaldococcus jannaschii} SCOP: b.85.4.1 PDB: 1ogh_A 1pkj_A* 1pkk_A* 2hxb_A 2hxe_A 3gf0_A 2hxd_A* Back     alignment and structure
>2yzj_A 167AA long hypothetical dutpase; all beta proteins, hypothetical protein, NPPSFA; HET: DUD; 1.66A {Sulfolobus tokodaii} PDB: 2zdc_A Back     alignment and structure
>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genom MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} Back     alignment and structure
>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genom MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} Back     alignment and structure
>1f7d_A POL polyprotein; eight stranded beta-barrel, viral protein, hydrolase; 1.40A {Feline immunodeficiency virus} SCOP: b.85.4.1 PDB: 1f7k_A* 1f7n_A* 1f7o_A 1f7p_A* 1f7q_A* 1f7r_A* 1dut_A Back     alignment and structure
>1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} SCOP: b.85.4.1 PDB: 1duc_A Back     alignment and structure
>2ol1_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; fold, jelly-roll, superfamily, dutpase-like; HET: UMP; 1.80A {Vaccinia virus} PDB: 2oke_A* 2okd_A* 2ol0_A* 2okb_A Back     alignment and structure
>3lqw_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; emerald biostructures, ALS collaborative crystallography; 1.30A {Entamoeba histolytica} Back     alignment and structure
>3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A* Back     alignment and structure
>1euw_A Dutpase, deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, mercury derivative; 1.05A {Escherichia coli} SCOP: b.85.4.1 PDB: 1dud_A 1dup_A 1eu5_A 1rn8_A* 1seh_A* 2hr6_A* 2hrm_A* 1rnj_A* 1syl_A* Back     alignment and structure
>3p48_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, DUMPPNP pyrophosphatase, phosphoprotein, structural genomics; HET: DUP; 1.67A {Saccharomyces cerevisiae} SCOP: b.85.4.0 Back     alignment and structure
>3so2_A Putative uncharacterized protein; deoxyuridine triphosphatase, dutpase, cancer MARK hydrolase; 1.64A {Chlorella variabilis} Back     alignment and structure
>3ca9_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} Back     alignment and structure
>2p9o_A DUTP pyrophosphatase-like protein; dutpase, magnesium binding, hydrolase; 2.00A {Arabidopsis thaliana} PDB: 2pc5_A Back     alignment and structure
>3f4f_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, UMP, product complex, DUTP pyrophosphat DITP; HET: UMP; 2.00A {Saccharomyces cerevisiae} PDB: 3hhq_A Back     alignment and structure
>3ara_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; magnesium binding, hydrolase-hydrolase inhibitor; HET: MKH; 1.70A {Homo sapiens} PDB: 2hqu_A* 3arn_A* 3ehw_A* 1q5h_A* 1q5u_X Back     alignment and structure
>3ecy_A CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, dimeric assembly, hydrolase; 1.88A {Drosophila melanogaster} Back     alignment and structure
>3h6x_A Dutpase; jelly-roll beta-barrel, hydrolase; 1.70A {Streptococcus mutans} Back     alignment and structure
>3hza_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, domain swapping, nucleotide metabolis; HET: DUP; 1.20A {Mycobacterium tuberculosis} SCOP: b.85.4.1 PDB: 3loj_A* 1six_A* 1slh_A* 1sm8_A* 1smc_A* 1snf_A* 2py4_A* 3h6d_A* 3i93_A* 1mq7_A 1sjn_A* 4gk6_A Back     alignment and structure
>3mdx_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; metal-binding, nucleotide metabolism, structural genomics; 1.45A {Brucella melitensis} PDB: 3mbq_A Back     alignment and structure
>3tqz_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; purines, pyrimidines, nucleosides, nucleotides; 1.75A {Coxiella burnetii} Back     alignment and structure
>2xx6_A SPBC2 prophage-derived deoxyuridine 5'-triphospha nucleotidohydrolase YOSS; 1.74A {Bacillus subtilis} PDB: 2baz_A 2xy3_A* 2y1t_A* 2xcd_A 2xce_A* Back     alignment and structure
>3tq5_A Deoxyuridine 5'-triphosphate nucleotido hydrolase; jelly roll; HET: UMP; 1.40A {Mason-pfizer monkey virus} PDB: 2d4m_A 2d4l_A* 3tp1_A* 3tpn_A* 3tps_A* 3tpw_A* 3tpy_A* 3tq3_A* 3tq4_A* 2d4n_A* 3trl_A* 3trn_A* 3ts6_A* 3tsl_A* 3tta_A* Back     alignment and structure
>3t64_A Deoxyuridine 5'-triphosphate nucleotidohydrolase,; hydrolase, DUTP binding, nucleus, hydrolase-hydrolase inhibi complex; HET: DU3; 1.65A {Plasmodium falciparum 3D7} PDB: 3t6y_A* 3t70_A* 3t60_A* 2y8c_A* 1vyq_A* Back     alignment and structure
>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A* Back     alignment and structure
>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 188
d1xs1a_193 b.85.4.1 (A:) Deoxycytidine triphosphate deaminase 2e-40
d1pkha_182 b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase 2e-24
d2bsya2136 b.85.4.1 (A:121-256) Monomeric viral dUTPase {Epst 2e-13
>d1xs1a_ b.85.4.1 (A:) Deoxycytidine triphosphate deaminase (dCTP deaminase) {Escherichia coli [TaxId: 562]} Length = 193 Back     information, alignment and structure

class: All beta proteins
fold: beta-clip
superfamily: dUTPase-like
family: dUTPase-like
domain: Deoxycytidine triphosphate deaminase (dCTP deaminase)
species: Escherichia coli [TaxId: 562]

 Score =  133 bits (336), Expect = 2e-40
 Identities = 47/201 (23%), Positives = 76/201 (37%), Gaps = 27/201 (13%)

Query: 3   IKSDNWIHNMAKYHGM-IEPFVPHQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINS 61
              D  I        + I P  P +             I+    D+R  N+F+ F    +
Sbjct: 2   RLCDRDIEAWLDEGRLSINPRPPVER------------INGATVDVRLGNKFRTFRGHTA 49

Query: 62  TIID---PKNFDNKLFVDFV--------GDVCIIPPNSFVLARTIEYFRIPRKILTMCIG 110
             ID   PK+  +      +        G+   + P    LA T+E   +P  ++    G
Sbjct: 50  AFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPADLVGWLDG 109

Query: 111 KSTYARCGIIVNVTP--FEPEWEGYVTLEFSNTTPLPAKIYSEEGCAQVLFFESDETCKT 168
           +S+ AR G++V+VT    +P W G + LEF N+  LP  +        + F         
Sbjct: 110 RSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPLSGPAVR 169

Query: 169 SYKDR-NGKYQGQTGINLPKI 188
            Y  R + KY+ Q G    +I
Sbjct: 170 PYNRREDAKYRNQQGAVASRI 190
>d1pkha_ b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 182 Back     information, alignment and structure
>d2bsya2 b.85.4.1 (A:121-256) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Length = 136 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query188
d1xs1a_193 Deoxycytidine triphosphate deaminase (dCTP deamina 100.0
d1pkha_182 Bifunctional dCTP deaminase/dUTPase {Archaeon Meth 100.0
d1duna_120 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 99.94
d1f7da_118 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 99.91
d3ehwa1136 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 99.88
d2bsya2136 Monomeric viral dUTPase {Epstein-barr virus [TaxId 99.87
d2bsya1113 Monomeric viral dUTPase {Epstein-barr virus [TaxId 99.84
d1euwa_136 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 99.84
d1sixa_153 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 99.82
d1vyqa1159 Deoxyuridine 5'-triphosphate nucleotidohydrolase ( 99.82
>d1xs1a_ b.85.4.1 (A:) Deoxycytidine triphosphate deaminase (dCTP deaminase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All beta proteins
fold: beta-clip
superfamily: dUTPase-like
family: dUTPase-like
domain: Deoxycytidine triphosphate deaminase (dCTP deaminase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-51  Score=330.53  Aligned_cols=174  Identities=25%  Similarity=0.417  Sum_probs=154.5

Q ss_pred             ccCCHHHHHHHHHhCCC-cCCCCc-CccccccccceeecCcceeeEEeeeCCeEEEEecCCceeecCCCCCC--------
Q psy9404           2 TIKSDNWIHNMAKYHGM-IEPFVP-HQVREINSRKIVSYGISSYGYDIRCANEFKIFTNINSTIIDPKNFDN--------   71 (188)
Q Consensus         2 miLsd~~I~~~~~~~~~-I~Pf~~-~~i~pa~~~~~~~~~~~~~s~DlrLg~~~~~~~~~~~~~id~~~~~~--------   71 (188)
                      |||||++|++++++|.+ |+||++ +|+||+             |||||||++|++|+......+|......        
T Consensus         1 MiLSd~~I~~~i~~g~I~i~P~~~~~qiqp~-------------s~DLrLg~~~~v~~~~~~~~id~~~~~~~~~~~~~~   67 (193)
T d1xs1a_           1 MRLCDRDIEAWLDEGRLSINPRPPVERINGA-------------TVDVRLGNKFRTFRGHTAAFIDLSGPKDEVSAALDR   67 (193)
T ss_dssp             CBCCHHHHHHHHHHTSSEEESCCCGGGEETT-------------EEEEEBCSEEBCBCGGGCSCEETTSCHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHcCCeEEccCChhhccCCc-------------eEEEEcccEEEEEecccccccccCCCcchhhhhhhh
Confidence            89999999999999886 999987 699986             9999999999999876667788654321        


Q ss_pred             --cceEEe-cCceEEECCCCEEEEEeeeEEEcCCCeEEEEEccccccccCeEeecce--eCCCCceEEEEEEEeCCCCCE
Q psy9404          72 --KLFVDF-VGDVCIIPPNSFVLARTIEYFRIPRKILTMCIGKSTYARCGIIVNVTP--FEPEWEGYVTLEFSNTTPLPA  146 (188)
Q Consensus        72 --~~~~~~-~~~~~~l~Pg~~~lv~T~E~i~lP~~~~~~i~~RSsl~R~Gl~v~~t~--iDpGy~G~i~l~i~N~~~~~i  146 (188)
                        .....+ +++.++|+||++||+.|.|+|++|++++|++.+|||++|+|+.++.++  +||||+|+++||++|+++.|+
T Consensus        68 ~~~~~~~~~~~~~~~L~Pg~~~L~~T~E~v~lP~~~~a~~~~rSS~~R~Gl~~~~~ag~~dpG~~G~ltlel~n~~~~pi  147 (193)
T d1xs1a_          68 VMSDEIVLDEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPL  147 (193)
T ss_dssp             HBCCCEECCTTCCEEECTTCCEEEEEEEEEECCTTEEEEEECCHHHHTTTEESCSSCCEECTTCEEEEEEEEEECSSSCE
T ss_pred             cccceeeecCCceEEEeCCCEEEEEEEEEEecCcceEEEEEecccceeeEEEEeccccEECCCCceeEEEEEEeCCcceE
Confidence              011122 457899999999999999999999999999999999999999987665  999999999999999999999


Q ss_pred             EEeCCCeEEEEEEeeccccccccccCC-CcccCCCCCCCCCCC
Q psy9404         147 KIYSEEGCAQVLFFESDETCKTSYKDR-NGKYQGQTGINLPKI  188 (188)
Q Consensus       147 ~i~~G~riaQlvF~~~~~~~~~~Y~~~-~GkYq~~~~~~~s~~  188 (188)
                      +|++|+|||||+|+++.++++++|+.+ +||||+|+|+++||+
T Consensus       148 ~i~~g~~i~Qlvf~~~~~~~~~~Y~~~~~gkYq~q~g~~~sk~  190 (193)
T d1xs1a_         148 ALRPGMLIGALSFEPLSGPAVRPYNRREDAKYRNQQGAVASRI  190 (193)
T ss_dssp             EECTTSEEEEEEEEECSSCCSSCGGGCTTCSCSSBCSCCCCCG
T ss_pred             EEcCCCEEEEEEEEECCCCcccccCCCCCCcCCCCCCCCcccc
Confidence            999999999999999999999999765 699999999999985
>d1pkha_ b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1duna_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure
>d1f7da_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Feline immunodeficiency virus [TaxId: 11673]} Back     information, alignment and structure
>d3ehwa1 b.85.4.1 (A:24-159) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bsya2 b.85.4.1 (A:121-256) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Back     information, alignment and structure
>d2bsya1 b.85.4.1 (A:4-116) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]} Back     information, alignment and structure
>d1euwa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sixa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Mycobacterium tuberculosis, rv2697c [TaxId: 1773]} Back     information, alignment and structure
>d1vyqa1 b.85.4.1 (A:1-159) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure